Psyllid ID: psy15349

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80
Protein Sequence
MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLYLALTPFHTI
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHcccccccEEEEccccccEEEEEEccEEcccccHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHEEccHHHccccccccHHHHHHHcccccEEEEEccEEEEEEEEccEEEEEcHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MNPNNTIFDAKrligrkfddatvqadmkhwpftvvsdggkpkiqveykgetksffpeeVGIMWWSLEPvlylaltpfhti
Flexible Loop (DISEMBL)
mnpnntifdakrligrKFDDATVQADMKhwpftvvsdggkpKIQVEYKGETKSFFPEEVGIMWWSLEPVLYLALTPFHTI
Low Complexity Region (SEG)
MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLYLALTPFHTI
Disordered region (IsUnstruct)
******IFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLYLALTPF***
Disordered Region (DISOPRED)
MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLYLALTPFH**
Disordered Region (DISEMBL)
MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLYLALTPFHTI
Disordered Region (DISPRO)
*NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLYLALTP****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLYLALTPFHTI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	80	2.2.26 [Sep-21-2011]
P54652	639	Heat shock-related 70 kDa	yes	N/A	0.775	0.097	0.838	4e-28
P14659	633	Heat shock-related 70 kDa	yes	N/A	0.775	0.097	0.822	2e-27
P17156	633	Heat shock-related 70 kDa	yes	N/A	0.775	0.097	0.822	2e-27
Q9TUG3	636	Heat shock-related 70 kDa	N/A	N/A	0.775	0.097	0.822	2e-27
P34933	636	Heat shock-related 70 kDa	yes	N/A	0.775	0.097	0.822	2e-27
Q9U639	652	Heat shock 70 kDa protein	N/A	N/A	0.812	0.099	0.830	3e-27
O73885	646	Heat shock cognate 71 kDa	yes	N/A	0.775	0.095	0.774	7e-27
Q5NVM9	646	Heat shock cognate 71 kDa	no	N/A	0.775	0.095	0.790	1e-26
Q71U34	646	Heat shock cognate 71 kDa	N/A	N/A	0.775	0.095	0.790	1e-26
P63018	646	Heat shock cognate 71 kDa	no	N/A	0.775	0.095	0.790	1e-26

>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1

 Score =  123 bits (308), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/62 (83%), Positives = 58/62 (93%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGETK+FFPEE+ 
Sbjct: 62  MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEIS 121

Query: 61  IM 62
            M
Sbjct: 122 SM 123

In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.
Homo sapiens (taxid: 9606)

>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2

 Score =  120 bits (302), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/62 (82%), Positives = 57/62 (91%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGE K+FFPEE+ 
Sbjct: 62  MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEIS 121

Query: 61  IM 62
            M
Sbjct: 122 SM 123

In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.

Rattus norvegicus (taxid: 10116)

>sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=2

 Score =  120 bits (302), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/62 (82%), Positives = 57/62 (91%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGE K+FFPEE+ 
Sbjct: 62  MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEIS 121

Query: 61  IM 62
            M
Sbjct: 122 SM 123

In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.

Mus musculus (taxid: 10090)

>sp|Q9TUG3|HSP72_CAPHI Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1

 Score =  120 bits (302), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/62 (82%), Positives = 57/62 (91%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGE K+FFPEE+ 
Sbjct: 62  MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEIS 121

Query: 61  IM 62
            M
Sbjct: 122 SM 123

In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.

Capra hircus (taxid: 9925)

>sp|P34933|HSP72_BOVIN Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2

 Score =  120 bits (302), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/62 (82%), Positives = 57/62 (91%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGE K+FFPEE+ 
Sbjct: 62  MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEIKTFFPEEIS 121

Query: 61  IM 62
            M
Sbjct: 122 SM 123

In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.

Bos taurus (taxid: 9913)

>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 54/65 (83%), Positives = 58/65 (89%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGRKF+DATVQADMKHWPF VVSDGGKPKI+V YKGE K+FFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 120

Query: 61  IMWWS 65
            M  +
Sbjct: 121 SMVLT 125

Manduca sexta (taxid: 7130)

>sp|O73885|HSP7C_CHICK Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1

 Score =  119 bits (297), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/62 (77%), Positives = 57/62 (91%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDD+ VQ+DMKHWPFTVV+D G+PK+QVEYKGETKSF+PEE+ 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDSVVQSDMKHWPFTVVNDAGRPKVQVEYKGETKSFYPEEIS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Chaperone. May play a role in regulating apoptosis during embryonic development.

Gallus gallus (taxid: 9031)

>sp|Q5NVM9|HSP7C_PONAB Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2

 Score =  118 bits (296), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.

Pongo abelii (taxid: 9601)

>sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1

 Score =  118 bits (296), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Chaperone. Isoform 2 may function as an endogenous inhibitory regulator of HSC70 by competing the co-chaperones.

Saguinus oedipus (taxid: 9490)

>sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1

 Score =  118 bits (296), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
189214174	653	heat shock cognate protein 70 [Macrocent	0.775	0.094	0.919	5e-29
189214178	653	heat shock cognate protein 70 [Macrocent	0.775	0.094	0.919	6e-29
67462298	364	heta shock protein 70 [Lamtostyla sp. LP	0.775	0.170	0.854	5e-28
118785980	647	AGAP004944-PA [Anopheles gambiae str. PE	0.775	0.095	0.903	5e-28
169303106	655	heat shock cognate 70 protein [Pteromalu	0.775	0.094	0.870	1e-27
289629294	655	heat shock cognate 70 [Nasonia vitripenn	0.775	0.094	0.870	1e-27
388523599	653	heat shock protein 70 [Cryptocercus punc	0.775	0.094	0.887	2e-27
451173139	655	heat shock cognate 70 [Polyrhachis vicin	0.775	0.094	0.854	4e-27
307176326	655	Heat shock 70 kDa protein cognate 4 [Cam	0.775	0.094	0.854	4e-27
195173089	648	GL15719 [Drosophila persimilis] gi|19411	0.775	0.095	0.870	4e-27

>gi|189214174|gb|ACD84943.1| heat shock cognate protein 70 [Macrocentrus cingulum]

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/62 (91%), Positives = 60/62 (96%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGR+FDDATVQADMKHWPFTVVSDGGKPKIQV+YKGETK+FFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRRFDDATVQADMKHWPFTVVSDGGKPKIQVQYKGETKTFFPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Source: Macrocentrus cingulum

Species: Macrocentrus cingulum

Genus: Macrocentrus

Family: Braconidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189214178|gb|ACD84945.1| heat shock cognate protein 70 [Macrocentrus cingulum]

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 57/62 (91%), Positives = 60/62 (96%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGR+FDDATVQADMKHWPFTVVSDGGKPKIQV+YKGETK+FFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRRFDDATVQADMKHWPFTVVSDGGKPKIQVQYKGETKTFFPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Source: Macrocentrus cingulum

Species: Macrocentrus cingulum

Genus: Macrocentrus

Family: Braconidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|67462298|gb|AAY67882.1| heta shock protein 70 [Lamtostyla sp. LPJ-2005]

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/62 (85%), Positives = 60/62 (96%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNT+FDAKRLIGR+FDDATVQ+DMKHWPFTV+SDGGKPKIQVE+KGETK+FFPEE+ 
Sbjct: 56  MNPNNTVFDAKRLIGRRFDDATVQSDMKHWPFTVISDGGKPKIQVEFKGETKTFFPEEIS 115

Query: 61  IM 62
            M
Sbjct: 116 SM 117

Source: Lamtostyla sp. LPJ-2005

Species: Lamtostyla sp. LPJ-2005

Genus: Lamtostyla

Family: Trachelostylidae

Order: Sporadotrichida

Class: Spirotrichea

Superkingdom: Eukaryota

>gi|118785980|ref|XP_315042.3| AGAP004944-PA [Anopheles gambiae str. PEST] gi|116127667|gb|EAA10375.3| AGAP004944-PA [Anopheles gambiae str. PEST]

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 56/62 (90%), Positives = 58/62 (93%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGRKFDDATVQADMKHWPF V+SDGGKPK+QVEYKGE KSFFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFDVISDGGKPKLQVEYKGEKKSFFPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|169303106|gb|ACA53150.1| heat shock cognate 70 protein [Pteromalus puparum]

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/62 (87%), Positives = 59/62 (95%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGR+F+DATVQADMKHWPF V+SDGGKPKIQV+YKGETK+FFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRRFEDATVQADMKHWPFNVISDGGKPKIQVQYKGETKTFFPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Source: Pteromalus puparum

Species: Pteromalus puparum

Genus: Pteromalus

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289629294|ref|NP_001166228.1| heat shock cognate 70 [Nasonia vitripennis]

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/62 (87%), Positives = 59/62 (95%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGR+F+DATVQADMKHWPF V+SDGGKPKIQV+YKGETK+FFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRRFEDATVQADMKHWPFNVISDGGKPKIQVQYKGETKTFFPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|388523599|gb|AFK49798.1| heat shock protein 70 [Cryptocercus punctulatus]

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/62 (88%), Positives = 59/62 (95%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGR+FDDATVQADMKHWPFTVVS+GGKPKIQV YKG+TK+FFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRRFDDATVQADMKHWPFTVVSEGGKPKIQVMYKGDTKTFFPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Source: Cryptocercus punctulatus

Species: Cryptocercus punctulatus

Genus: Cryptocercus

Family: Cryptocercidae

Order: Blattodea

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|451173139|gb|AGF33487.1| heat shock cognate 70 [Polyrhachis vicina]

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/62 (85%), Positives = 59/62 (95%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGR+F+D T+QADMKHWPFTVV+DGGKPKIQV+YKGETK+FFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRRFEDPTIQADMKHWPFTVVNDGGKPKIQVQYKGETKTFFPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Source: Polyrhachis vicina

Species: Polyrhachis vicina

Genus: Polyrhachis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176326|gb|EFN65945.1| Heat shock 70 kDa protein cognate 4 [Camponotus floridanus]

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/62 (85%), Positives = 59/62 (95%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGR+F+D T+QADMKHWPFTVV+DGGKPKIQV+YKGETK+FFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRRFEDPTIQADMKHWPFTVVNDGGKPKIQVQYKGETKTFFPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195173089|ref|XP_002027327.1| GL15719 [Drosophila persimilis] gi|194113170|gb|EDW35213.1| GL15719 [Drosophila persimilis]

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 54/62 (87%), Positives = 57/62 (91%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNPNNTIFDAKRLIGR+FDDATVQ+DMKHWPF VVSD GKP+IQVEYKGE KSFFPEEV 
Sbjct: 61  MNPNNTIFDAKRLIGRRFDDATVQSDMKHWPFEVVSDSGKPRIQVEYKGEKKSFFPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
UNIPROTKB|P54652	639	HSPA2 "Heat shock-related 70 k	0.775	0.097	0.838	6.1e-25
UNIPROTKB|E9PK54	184	HSPA8 "Heat shock cognate 71 k	0.775	0.336	0.790	1.6e-24
UNIPROTKB|E9PLF4	187	HSPA8 "Heat shock cognate 71 k	0.775	0.331	0.790	1.6e-24
UNIPROTKB|E9PN25	132	HSPA8 "Heat shock cognate 71 k	0.775	0.469	0.790	1.6e-24
UNIPROTKB|E9PN89	312	HSPA8 "Heat shock cognate 71 k	0.775	0.198	0.790	1.6e-24
UNIPROTKB|E9PPY6	137	HSPA8 "Heat shock cognate 71 k	0.775	0.452	0.790	1.6e-24
UNIPROTKB|E9PQK7	178	HSPA8 "Heat shock cognate 71 k	0.775	0.348	0.790	1.6e-24
UNIPROTKB|E9PQQ4	171	HSPA8 "Heat shock cognate 71 k	0.775	0.362	0.790	1.6e-24
MGI|MGI:96243	633	Hspa2 "heat shock protein 2" [	0.775	0.097	0.822	2.7e-24
RGD|620664	633	Hspa2 "heat shock protein 2" [	0.775	0.097	0.822	2.7e-24

UNIPROTKB|P54652 HSPA2 "Heat shock-related 70 kDa protein 2" [Homo sapiens (taxid:9606)]

 Score = 292 (107.8 bits), Expect = 6.1e-25, P = 6.1e-25
 Identities = 52/62 (83%), Positives = 58/62 (93%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGETK+FFPEE+ 
Sbjct:    62 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEIS 121

Query:    61 IM 62
              M
Sbjct:   122 SM 123

GO:0005524 "ATP binding" evidence=IEA

GO:0000795 "synaptonemal complex" evidence=IEA

GO:0001673 "male germ cell nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0007141 "male meiosis I" evidence=IEA

GO:0007286 "spermatid development" evidence=IEA

GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M" evidence=IEA

GO:0051861 "glycolipid binding" evidence=IEA

GO:0070194 "synaptonemal complex disassembly" evidence=IEA

GO:0009986 "cell surface" evidence=IDA

GO:0036128 "CatSper complex" evidence=ISS

GO:0007140 "male meiosis" evidence=TAS

GO:0051082 "unfolded protein binding" evidence=TAS

GO:0006986 "response to unfolded protein" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|E9PK54 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct:    61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query:    61 IM 62
              M
Sbjct:   121 SM 122

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0042623 "ATPase activity, coupled" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0070062 "extracellular vesicular exosome" evidence=IEA

UNIPROTKB|E9PLF4 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct:    61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query:    61 IM 62
              M
Sbjct:   121 SM 122

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0042623 "ATPase activity, coupled" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0070062 "extracellular vesicular exosome" evidence=IEA

UNIPROTKB|E9PN25 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct:    61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query:    61 IM 62
              M
Sbjct:   121 SM 122

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0042623 "ATPase activity, coupled" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0070062 "extracellular vesicular exosome" evidence=IEA

UNIPROTKB|E9PN89 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct:     1 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 60

Query:    61 IM 62
              M
Sbjct:    61 SM 62

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0042623 "ATPase activity, coupled" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0070062 "extracellular vesicular exosome" evidence=IEA

UNIPROTKB|E9PPY6 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct:    61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query:    61 IM 62
              M
Sbjct:   121 SM 122

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0042623 "ATPase activity, coupled" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0070062 "extracellular vesicular exosome" evidence=IEA

UNIPROTKB|E9PQK7 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct:    61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query:    61 IM 62
              M
Sbjct:   121 SM 122

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0042623 "ATPase activity, coupled" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0070062 "extracellular vesicular exosome" evidence=IEA

UNIPROTKB|E9PQQ4 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct:    61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query:    61 IM 62
              M
Sbjct:   121 SM 122

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0042623 "ATPase activity, coupled" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0070062 "extracellular vesicular exosome" evidence=IEA

MGI|MGI:96243 Hspa2 "heat shock protein 2" [Mus musculus (taxid:10090)]

 Score = 286 (105.7 bits), Expect = 2.7e-24, P = 2.7e-24
 Identities = 51/62 (82%), Positives = 57/62 (91%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGE K+FFPEE+ 
Sbjct:    62 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEIS 121

Query:    61 IM 62
              M
Sbjct:   122 SM 123

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000795 "synaptonemal complex" evidence=IDA

GO:0001673 "male germ cell nucleus" evidence=IDA

GO:0001934 "positive regulation of protein phosphorylation" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006950 "response to stress" evidence=IEA

GO:0007140 "male meiosis" evidence=IMP

GO:0007141 "male meiosis I" evidence=IMP

GO:0007286 "spermatid development" evidence=IMP

GO:0009986 "cell surface" evidence=ISO;IDA

GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M" evidence=IMP

GO:0036128 "CatSper complex" evidence=IDA

GO:0051861 "glycolipid binding" evidence=IDA

GO:0070194 "synaptonemal complex disassembly" evidence=IMP

RGD|620664 Hspa2 "heat shock protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 286 (105.7 bits), Expect = 2.7e-24, P = 2.7e-24
 Identities = 51/62 (82%), Positives = 57/62 (91%)

Query:     1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
             MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGE K+FFPEE+ 
Sbjct:    62 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGEMKTFFPEEIS 121

Query:    61 IM 62
              M
Sbjct:   122 SM 123

GO:0000795 "synaptonemal complex" evidence=IEA;ISO

GO:0001673 "male germ cell nucleus" evidence=IEA;ISO

GO:0001934 "positive regulation of protein phosphorylation" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006950 "response to stress" evidence=IEA

GO:0007140 "male meiosis" evidence=ISO

GO:0007141 "male meiosis I" evidence=IEA;ISO

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007286 "spermatid development" evidence=IEA;ISO

GO:0009986 "cell surface" evidence=IEA;ISO

GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M" evidence=IEA;ISO

GO:0036128 "CatSper complex" evidence=ISO;ISS

GO:0051861 "glycolipid binding" evidence=IEA;ISO

GO:0070194 "synaptonemal complex disassembly" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P29843	HSP7A_DROME	No assigned EC number	0.7903	0.775	0.0967	yes	N/A
O73885	HSP7C_CHICK	No assigned EC number	0.7741	0.775	0.0959	yes	N/A
P14659	HSP72_RAT	No assigned EC number	0.8225	0.775	0.0979	yes	N/A
P54652	HSP72_HUMAN	No assigned EC number	0.8387	0.775	0.0970	yes	N/A
A2Q0Z1	HSP7C_HORSE	No assigned EC number	0.7903	0.775	0.0959	yes	N/A
P17156	HSP72_MOUSE	No assigned EC number	0.8225	0.775	0.0979	yes	N/A
O59855	HSP72_SCHPO	No assigned EC number	0.7580	0.775	0.0958	yes	N/A
P34933	HSP72_BOVIN	No assigned EC number	0.8225	0.775	0.0974	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	80
cd10233	376	cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding	7e-40
PTZ00009	653	PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro	5e-31
cd10241	374	cd10241, HSPA5-like_NBD, Nucleotide-binding domain	2e-29
pfam00012	598	pfam00012, HSP70, Hsp70 protein	7e-25
cd10228	381	cd10228, HSPA4_like_NDB, Nucleotide-binding domain	2e-17
cd11733	377	cd11733, HSPA9-like_NBD, Nucleotide-binding domain	8e-12
cd10170	369	cd10170, HSP70_NBD, Nucleotide-binding domain of t	3e-11
cd10237	417	cd10237, HSPA13-like_NBD, Nucleotide-binding domai	1e-10
TIGR02350	595	TIGR02350, prok_dnaK, chaperone protein DnaK	3e-10
cd10238	375	cd10238, HSPA14-like_NBD, Nucleotide-binding domai	5e-10
cd11734	373	cd11734, Ssq1_like_NBD, Nucleotide-binding domain	5e-10
PRK00290	627	PRK00290, dnaK, molecular chaperone DnaK; Provisio	8e-10
PTZ00186	657	PTZ00186, PTZ00186, heat shock 70 kDa precursor pr	2e-09
cd10234	376	cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d	2e-09
cd11739	383	cd11739, HSPH1_NBD, Nucleotide-binding domain of H	1e-08
CHL00094	621	CHL00094, dnaK, heat shock protein 70	9e-08
PTZ00400	663	PTZ00400, PTZ00400, DnaK-type molecular chaperone;	1e-07
PLN03184	673	PLN03184, PLN03184, chloroplast Hsp70; Provisional	4e-07
PRK13410	668	PRK13410, PRK13410, molecular chaperone DnaK; Prov	2e-04
cd11738	383	cd11738, HSPA4L_NBD, Nucleotide-binding domain of	3e-04
PRK05183	616	PRK05183, hscA, chaperone protein HscA; Provisiona	6e-04
PRK13411	653	PRK13411, PRK13411, molecular chaperone DnaK; Prov	6e-04
cd10232	386	cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma	9e-04
cd11737	383	cd11737, HSPA4_NBD, Nucleotide-binding domain of H	0.001
cd11732	377	cd11732, HSP105-110_like_NBD, Nucleotide-binding d	0.003
COG0443	579	COG0443, DnaK, Molecular chaperone [Posttranslatio	0.003

>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins

 Score =  134 bits (338), Expect = 7e-40
 Identities = 46/62 (74%), Positives = 52/62 (83%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGRKF D  VQ+DMKHWPF VV+ GGKP I VEYKGETK+F+PEE+ 
Sbjct: 56  MNPTNTVFDAKRLIGRKFSDPVVQSDMKHWPFKVVNGGGKPPIIVEYKGETKTFYPEEIS 115

Query: 61  IM 62
            M
Sbjct: 116 SM 117

This subfamily includes human HSPA1A (70-kDa heat shock protein 1A, also known as HSP72; HSPA1; HSP70I; HSPA1B; HSP70-1; HSP70-1A), HSPA1B (70-kDa heat shock protein 1B, also known as HSPA1A; HSP70-2; HSP70-1B), and HSPA1L (70-kDa heat shock protein 1-like, also known as HSP70T; hum70t; HSP70-1L; HSP70-HOM). The genes for these three HSPA1 proteins map in close proximity on the major histocompatibility complex (MHC) class III region on chromosome 6, 6p21.3. This subfamily also includes human HSPA8 (heat shock 70kDa protein 8, also known as LAP1; HSC54; HSC70; HSC71; HSP71; HSP73; NIP71; HSPA10; the HSPA8 gene maps to 11q24.1), human HSPA2 (70-kDa heat shock protein 2, also known as HSP70-2; HSP70-3, the HSPA2 gene maps to 14q24.1), human HSPA6 (also known as heat shock 70kDa protein 6 (HSP70B') gi 94717614, the HSPA6 gene maps to 1q23.3), human HSPA7 (heat shock 70kDa protein 7 , also known as HSP70B; the HSPA7 gene maps to 1q23.3) and Saccharmoyces cerevisiae Stress-Seventy subfamily B/Ssb1p. This subfamily belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Associations of polymorphisms within the MHC-III HSP70 gene locus with longevity, systemic lupus erythematosus, Meniere's disease, noise-induced hearing loss, high-altitude pulmonary edema, and coronary heart disease, have been found. HSPA2 is involved in cancer cell survival, is required for maturation of male gametophytes, and is linked to male infertility. The induction of HSPA6 is a biomarker of cellular stress. HSPA8 participates in the folding and trafficking of client proteins to different subcellular compartments, and in the signal transduction and apoptosis process; it has been shown to protect cardiomyocytes against oxidative stress partly through an interaction with alpha-enolase. S. cerevisiae Ssb1p, is part of the ribosome-associated complex (RAC), it acts as a chaperone for nascent polypeptides, and is important for translation fidelity; Ssb1p is also a [PSI+] prion-curing factor. Length = 376

>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional

 Score =  112 bits (283), Expect = 5e-31
 Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDG-GKPKIQVEYKGETKSFFPEEV 59
            NP NT+FDAKRLIGRKFDD+ VQ+DMKHWPF V + G  KP I+V Y+GE K+F PEE+
Sbjct: 61  RNPENTVFDAKRLIGRKFDDSVVQSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEI 120

Query: 60  GIM 62
             M
Sbjct: 121 SSM 123

Length = 653

>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins

 Score =  107 bits (268), Expect = 2e-29
 Identities = 38/62 (61%), Positives = 45/62 (72%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
            NP NTIFD KRLIGRKFDD  VQ D+K  P+ VV+  GKP I+V+ KGE K+F PEE+ 
Sbjct: 58  SNPENTIFDVKRLIGRKFDDKEVQKDIKLLPYKVVNKDGKPYIEVDVKGEKKTFSPEEIS 117

Query: 61  IM 62
            M
Sbjct: 118 AM 119

This subfamily includes human HSPA5 (also known as 70-kDa heat shock protein 5, glucose-regulated protein 78/GRP78, and immunoglobulin heavy chain-binding protein/BIP, MIF2; the gene encoding HSPA5 maps to 9q33.3.), Sacchaormyces cerevisiae Kar2p (also known as Grp78p), and related proteins. This subfamily belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. HSPA5 and Kar2p are chaperones of the endoplasmic reticulum (ER). Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Multiple ER DNAJ domain proteins have been identified and may exist in distinct complexes with HSPA5 in various locations in the ER, for example DNAJC3-p58IPK in the lumen. HSPA5-NEFs include SIL1 and an atypical HSP70 family protein HYOU1/ORP150. The ATPase activity of Kar2p is stimulated by the NEFs: Sil1p and Lhs1p. Length = 374

>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein

 Score = 95.4 bits (238), Expect = 7e-25
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 3/63 (4%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVEYKGETKSFFPEEV 59
            NP NT+F  KRLIGRKF D  VQ D+KH P+ VV    G   ++V Y GET  F PE++
Sbjct: 56  TNPKNTVFSVKRLIGRKFSDPVVQRDIKHVPYKVVKLPNGDAGVEVRYLGET--FTPEQI 113

Query: 60  GIM 62
             M
Sbjct: 114 SAM 116

Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region. Length = 598

>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins

 Score = 74.1 bits (183), Expect = 2e-17
 Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPF-TVVSDGGKPKIQVEYKGETKSFFPEEV 59
            N  NT+ + KRLIGRKFDD  VQ ++K  PF  V    GK  I+V Y GE K F PE+V
Sbjct: 57  SNFKNTVRNFKRLIGRKFDDPEVQKELKFLPFKVVELPDGKVGIKVNYLGEEKVFSPEQV 116

This subgroup includes the human proteins, HSPA4 (also known as 70-kDa heat shock protein 4, APG-2, HS24/P52, hsp70 RY, and HSPH2; the human HSPA4 gene maps to 5q31.1), HSPA4L (also known as 70-kDa heat shock protein 4-like, APG-1, HSPH3, and OSP94; the human HSPA4L gene maps to 4q28), and HSPH1 (also known as heat shock 105kDa/110kDa protein 1, HSP105; HSP105A; HSP105B; NY-CO-25; the human HSPH1 gene maps to 13q12.3), Saccharomyces cerevisiae Sse1p and Sse2p, and a sea urchin sperm receptor. It belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family, and includes proteins believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 381

>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins

 Score = 58.2 bits (141), Expect = 8e-12
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 7/63 (11%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV--SDGGKPKIQVEYKGETKSFFPEEV 59
           NP NT++  KRLIGR+FDD  VQ D+K+ P+ +V  S+G      VE  G+  S  P ++
Sbjct: 61  NPENTLYATKRLIGRRFDDPEVQKDIKNVPYKIVKASNG---DAWVEAHGKKYS--PSQI 115

Query: 60  GIM 62
           G  
Sbjct: 116 GAF 118

This subgroup includes human mitochondrial HSPA9 (also known as 70-kDa heat shock protein 9, CSA; MOT; MOT2; GRP75; PBP74; GRP-75; HSPA9B; MTHSP75; the gene encoding HSPA9 maps to 5q31.1), Escherichia coli DnaK, and Saccharomyces cerevisiae Stress-Seventy subfamily C/Ssc1p (also called mtHSP70, Endonuclease SceI 75 kDa subunit). It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs); for Escherichia coli DnaK, these are the DnaJ and GrpE, respectively. HSPA9 is involved in multiple processses including mitochondrial import, antigen processing, control of cellular proliferation and differentiation, and regulation of glucose responses. During glucose deprivation-induced cellular stress, HSPA9 plays an important role in the suppression of apoptosis by inhibiting a conformational change in Bax that allow the release of cytochrome c. DnaK modulates the heat shock response in Escherichia coli. It protects E. coli from protein carbonylation, an irreversible oxidative modification that increases during organism aging and bacterial growth arrest. Under severe thermal stress, it functions as part of a bi-chaperone system: the DnaK system and the ring-forming AAA+ chaperone ClpB (Hsp104) system, to promote cell survival. DnaK has also been shown to cooperate with GroEL and the ribosome-associated Escherichia coli Trigger Factor in the proper folding of cytosolic proteins. S. cerevisiae Ssc1p is the major HSP70 chaperone of the mitochondrial matrix, promoting translocation of proteins from the cytosol, across the inner membrane, to the matrix, and their subsequent folding. Ssc1p interacts with Tim44, a peripheral inner membrane protein associated with the TIM23 protein translocase. It is also a subunit of the endoSceI site-specific endoDNase and is required for full endoSceI activity. Ssc1p plays roles in the import of Yfh1p, a nucleus-encoded mitochondrial protein involved in iron homeostasis (and a homolog of human frataxin, implicated in the neurodegenerative disease, Friedreich's ataxia). Ssc1 also participates in translational regulation of cytochrome c oxidase (COX) biogenesis by interacting with Mss51 and Mss51-containing complexes. Length = 377

>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family

 Score = 56.5 bits (137), Expect = 3e-11
 Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 4/60 (6%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
            NP NT+ D KRLIGRKFDD  VQ+  K     +  D G P I V  +   K + PEEV 
Sbjct: 57  DNPENTVGDFKRLIGRKFDDPLVQSAKKV----IGVDRGAPIIPVPVELGGKKYSPEEVS 112

HSP70 (70-kDa heat shock protein) family chaperones assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some HSP70 family members are not chaperones but instead, function as NEFs to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle, some may function as both chaperones and NEFs. Length = 369

>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins

 Score = 54.8 bits (132), Expect = 1e-10
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSD-GGKPKIQVEYKGETKSFFPEEVG 60
           NP NTI+DAKR IG+ F    ++ +   + F V  +             ETK+  PEE+G
Sbjct: 80  NPQNTIYDAKRFIGKIFTKEELEFESDRYRFKVKINSRNGAFFFSVLTNETKTVTPEEIG 139

Human HSPA13 (also called 70-kDa heat shock protein 13, STCH, "stress 70 protein chaperone, microsome-associated, 60kD", "stress 70 protein chaperone, microsome-associated, 60kDa"; the gene encoding HSPA13 maps to 21q11.1) belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). STCH contains an NBD but lacks an SBD. STCH may function to regulate cell proliferation and survival, and modulate the TRAIL-mediated cell death pathway. The HSPA13 gene is a candidate stomach cancer susceptibility gene; a mutation in the NBD coding region of HSPA13 has been identified in stomach cancer cells. The NBD of HSPA13 interacts with the ubiquitin-like proteins Chap1 and Chap2, implicating HSPA13 in regulating cell cycle and cell death events. HSPA13 is induced by the Ca2+ ionophore A23187. Length = 417

>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK

 Score = 53.9 bits (130), Expect = 3e-10
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGI 61
           NP NTI+  KR +GR+FD+  V  + K  P+ VV DGG  +++V    + K + P+E+  
Sbjct: 59  NPENTIYSIKRFMGRRFDE--VTEEAKRVPYKVVGDGGDVRVKV----DGKEYTPQEISA 112

Query: 62  M 62
           M
Sbjct: 113 M 113

Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved [Protein fate, Protein folding and stabilization]. Length = 595

>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins

 Score = 53.2 bits (128), Expect = 5e-10
 Identities = 17/61 (27%), Positives = 31/61 (50%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGI 61
           N  NTI   K+++GR + D   Q +       ++   G+PK ++  + +TK   P+EV  
Sbjct: 58  NAANTIVKNKQILGRSYSDPFKQKEKTESSCKIIEKDGEPKYEIFTEEKTKHVSPKEVAK 117

Query: 62  M 62
           +
Sbjct: 118 L 118

Human HSPA14 (also known as 70-kDa heat shock protein 14, HSP70L1, HSP70-4; the gene encoding HSPA14 maps to 10p13), is ribosome-associated and belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). HSPA14 interacts with the J-protein MPP11 to form the mammalian ribosome-associated complex (mRAC). HSPA14 participates in a pathway along with Nijmegen breakage syndrome 1 (NBS1, also known as p85 or nibrin), heat shock transcription factor 4b (HSF4b), and HSPA4 (belonging to a different subfamily), that induces tumor migration, invasion, and transformation. HSPA14 is a potent T helper cell (Th1) polarizing adjuvant that contributes to antitumor immune responses. Length = 375

>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins

 Score = 53.3 bits (128), Expect = 5e-10
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVEYKGETKSFFPEEV 59
           ++P NT F  KRLIGR+F D  VQ  MK   + +V    G   I     G+  S  P ++
Sbjct: 59  LHPENTFFATKRLIGRQFKDVEVQRKMKVPYYKIVEGRNGDAWIYT--NGKKYS--PSQI 114

Query: 60  G 60
            
Sbjct: 115 A 115

Ssq1p (also called Stress-seventy subfamily Q protein 1, Ssc2p, Ssh1p, mtHSP70 homolog) belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). S. cerevisiae Ssq1p is a mitochondrial chaperone that is involved in iron-sulfur (Fe/S) center biogenesis. Ssq1p plays a role in the maturation of Yfh1p, a nucleus-encoded mitochondrial protein involved in iron homeostasis (and a homolog of human frataxin, implicated in the neurodegenerative disease, Friedreich's ataxia). Length = 373

>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional

 Score = 52.8 bits (128), Expect = 8e-10
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEV 59
            NP NTIF  KRL+GR+ ++  VQ D+K  P+ +V  D G   +++    + K + P+E+
Sbjct: 60  TNPENTIFSIKRLMGRRDEE--VQKDIKLVPYKIVKADNGDAWVEI----DGKKYTPQEI 113

Query: 60  GIM 62
             M
Sbjct: 114 SAM 116

Length = 627

>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional

 Score = 52.0 bits (124), Expect = 2e-09
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVEYKGETKSFFPEEVG 60
           NP +T +  KRLIGR+F+D  +Q D+K+ P+ +V +  G   +Q    G  K + P ++G
Sbjct: 85  NPQSTFYAVKRLIGRRFEDEHIQKDIKNVPYKIVRAGNGDAWVQ---DGNGKQYSPSQIG 141

Length = 657

>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins

 Score = 51.5 bits (124), Expect = 2e-09
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
            NP NTIF  KR +GRKFD+   +  + +          K +I        K + P+E+ 
Sbjct: 60  TNPENTIFSIKRFMGRKFDEVEEERKVPYKVVVDEGGNYKVEIDS----NGKDYTPQEIS 115

Query: 61  IM 62
            M
Sbjct: 116 AM 117

This subfamily includes human mitochondrial HSPA9 (also known as 70-kDa heat shock protein 9, CSA; MOT; MOT2; GRP75; PBP74; GRP-75; HSPA9B; MTHSP75; the gene encoding HSPA9 maps to 5q31.1), Escherichia coli DnaK, Saccharomyces cerevisiae Stress-seventy subfamily Q protein 1/Ssq1p (also called Ssc2p, Ssh1p, mtHSP70 homolog), and S. cerevisiae Stress-Seventy subfamily C/Ssc1p (also called mtHSP70, Endonuclease SceI 75 kDa subunit). It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs); for Escherichia coli DnaK, these are the DnaJ and GrpE, respectively. Length = 376

>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1

 Score = 49.2 bits (117), Expect = 1e-08
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVG 60
           + NNT+ + KR  GR F+D  VQ + ++  + +V    G   ++V Y GE   F  E++ 
Sbjct: 58  HANNTVSNFKRFHGRAFNDPFVQKEKENLSYDLVPLKNGGVGVKVMYMGEEHLFSVEQIT 117

Query: 61  IM 62
            M
Sbjct: 118 AM 119

Human HSPH1 (also known as heat shock 105kDa/110kDa protein 1, HSP105; HSP105A; HSP105B; NY-CO-25; the human HSPH1 gene maps to 13q12.3) suppresses the aggregation of denatured proteins caused by heat shock in vitro, and may substitute for HSP70 family proteins to suppress the aggregation of denatured proteins in cells under severe stress. It reduces the protein aggregation and cytotoxicity associated with Polyglutamine (PolyQ) diseases, including Huntington's disease, which are a group of inherited neurodegenerative disorders sharing the characteristic feature of having insoluble protein aggregates in neurons. The expression of HSPH1 is elevated in various malignant tumors, including malignant melanoma, and there is a direct correlation between HSPH1 expression and B-cell non-Hodgkin lymphomas (B-NHLs) aggressiveness and proliferation. HSPH1 belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family. HSP105/110s are believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 383

>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70

 Score = 47.0 bits (112), Expect = 9e-08
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEV 59
           +NP NT +  KR IGRKF +  +  + K   + V +D     I++E     K F PEE+
Sbjct: 60  INPENTFYSVKRFIGRKFSE--ISEEAKQVSYKVKTD-SNGNIKIECPALNKDFSPEEI 115

Length = 621

>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional

 Score = 46.4 bits (110), Expect = 1e-07
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 5/60 (8%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVEYKGETKSFFPEEVG 60
           NP NT+F  KRLIGR++D+   + + K  P+ +V +  G     +E +G  K + P ++G
Sbjct: 100 NPENTVFATKRLIGRRYDEDATKKEQKILPYKIVRASNGDA--WIEAQG--KKYSPSQIG 155

Length = 663

>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional

 Score = 45.2 bits (107), Expect = 4e-07
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 5/60 (8%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSD-GGKPKIQVEYKGETKSFFPEEV 59
           +NP NT F  KR IGRK  +  V  + K   + VV D  G  K+     G  K F  EE+
Sbjct: 97  VNPENTFFSVKRFIGRKMSE--VDEESKQVSYRVVRDENGNVKLDCPAIG--KQFAAEEI 152

Length = 673

>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 11/66 (16%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDG-GKPKI---QVEYKGETKSFFP 56
           +NP NT ++ KR IGR++D+     + K  P+T+  +  G  +I   ++E     + F P
Sbjct: 60  LNPQNTFYNLKRFIGRRYDELD--PESKRVPYTIRRNEQGNVRIKCPRLE-----REFAP 112

Query: 57  EEVGIM 62
           EE+  M
Sbjct: 113 EELSAM 118

Length = 668

>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L

 Score = 36.9 bits (85), Expect = 3e-04
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVG 60
           N  NTI   K+L GR FDD  VQ +    P+ +     G   ++V Y  E + F  E+V 
Sbjct: 58  NVRNTIHGFKKLHGRSFDDPIVQTERIRLPYELQKMPNGSVGVKVRYLEEERPFAIEQVT 117

Query: 61  IM 62
            M
Sbjct: 118 GM 119

Human HSPA4L (also known as 70-kDa heat shock protein 4-like, APG-1, HSPH3, and OSP94; the human HSPA4L gene maps to 4q28) is expressed ubiquitously and predominantly in the testis. It is required for normal spermatogenesis and plays a role in osmotolerance. HSPA4L belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family. HSP105/110s are believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 383

>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional

 Score = 35.9 bits (84), Expect = 6e-04
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 3   PNNTIFDAKRLIGRKFDDATVQADMKHWPFT-VVSDGGKPKIQV 45
           P NTI   KR +GR   D  +Q    H P+  V S+ G P I+ 
Sbjct: 78  PKNTISSVKRFMGRSLAD--IQQRYPHLPYQFVASENGMPLIRT 119

Length = 616

>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional

 Score = 36.3 bits (84), Expect = 6e-04
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGI 61
           N  NT++  KR IGR++DD   + +    P+T V  G    + V+ +G  +++ P+E+  
Sbjct: 61  NAENTVYSIKRFIGRRWDDT--EEERSRVPYTCVK-GRDDTVNVQIRG--RNYTPQEISA 115

Query: 62  M 62
           M
Sbjct: 116 M 116

Length = 653

>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins

 Score = 35.4 bits (82), Expect = 9e-04
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 5/78 (6%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMK--HWPFTVVSDGGKPKIQVEYKGETKSFFPEEV 59
           N  NTI + + L+G+ F +  V A       P  V+  GG  + + E   +       EV
Sbjct: 58  NAKNTITNFRDLLGKPFSEIDVSAAAAAAPVPVAVIDVGGTVQEKEEPVPKETILTVHEV 117

Query: 60  GIMWWSLEPVLYLALTPF 77
            + +      L  A   F
Sbjct: 118 TVRFLR---RLKEAAEDF 132

Saccharomyces cerevisiae Ssz1p (also known as /Pdr13p/YHR064C) belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but rather, function as NEFs for their Hsp70 partners, while other family members function as both chaperones and NEFs. Ssz1 does not function as a chaperone; it facilitates the interaction between the HSP70 Ssb protein and its partner J-domain protein Zuo1 (also known as zuotin) on the ribosome. Ssz1 is found in a stable heterodimer (called RAC, ribosome associated complex) with Zuo1. Zuo1 can only stimulate the ATPase activity of Ssb, when it is in complex with Ssz1. Ssz1 binds ATP but neither nucleotide-binding, hydrolysis, or its SBD, is needed for its in vivo function. Length = 386

>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVG 60
           N  NT+   KR  GR F D  VQA+     + +V    G   I+V Y  E ++F  E+V 
Sbjct: 58  NAKNTVQGFKRFHGRAFSDPFVQAEKPSLAYDLVQLPTGSTGIKVMYMEEERNFTTEQVT 117

Query: 61  IM 62
            M
Sbjct: 118 AM 119

Human HSPA4 (also known as 70-kDa heat shock protein 4, APG-2, HS24/P52, hsp70 RY, and HSPH2; the human HSPA4 gene maps to 5q31.1) responds to acidic pH stress, is involved in the radioadaptive response, is required for normal spermatogenesis and is overexpressed in hepatocellular carcinoma. It participates in a pathway along with NBS1 (Nijmegen breakage syndrome 1, also known as p85 or nibrin), heat shock transcription factor 4b (HDF4b), and HSPA14 (belonging to a different HSP70 subfamily) that induces tumor migration, invasion, and transformation. HSPA4 expression in sperm was increased in men with oligozoospermia, especially in those with varicocele. HSPA4 belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family. HSP105/110s are believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 383

>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins

 Score = 34.2 bits (78), Expect = 0.003
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKH-WPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           N  NT+ + KR+IG  +     + + KH     V  D  K   +V + GE   F   ++ 
Sbjct: 56  NIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLA 115

Query: 61  IM 62
            M
Sbjct: 116 AM 117

This subfamily include the human proteins, HSPA4 (also known as 70-kDa heat shock protein 4, APG-2, HS24/P52, hsp70 RY, and HSPH2; the human HSPA4 gene maps to 5q31.1), HSPA4L (also known as 70-kDa heat shock protein 4-like, APG-1, HSPH3, and OSP94; the human HSPA4L gene maps to 4q28), and HSPH1 (also known as heat shock 105kDa/110kDa protein 1, HSP105; HSP105A; HSP105B; NY-CO-25; the human HSPH1 gene maps to 13q12.3), HYOU1 (also known as human hypoxia up-regulated 1, GRP170; HSP12A; ORP150; GRP-170; ORP-150; the human HYOU1 gene maps to11q23.1-q23.3), Saccharomyces cerevisiae Sse1p, Sse2p, and Lhs1p, and a sea urchin sperm receptor. It belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family, and includes proteins believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is also regulated by J-domain proteins. Length = 377

>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 34.2 bits (79), Expect = 0.003
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 1   MNPNNTIFDAKRLIGRK--FDDATVQADMKHWPFTVVS 36
            NP NTIF  KR IGR       +V+ D K +    +S
Sbjct: 64  DNPENTIFSIKRKIGRGSNGLKISVEVDGKKYTPEEIS 101

Length = 579

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	80
KOG0100|consensus	663		99.86
KOG0103|consensus	727		99.62
KOG0102|consensus	640		99.57
PTZ00009	653	heat shock 70 kDa protein; Provisional	99.54
KOG0101|consensus	620		99.51
PTZ00400	663	DnaK-type molecular chaperone; Provisional	99.47
PTZ00186	657	heat shock 70 kDa precursor protein; Provisional	99.4
PF00012	602	HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho	99.34
PRK13410	668	molecular chaperone DnaK; Provisional	99.32
PRK13411	653	molecular chaperone DnaK; Provisional	99.31
PRK00290	627	dnaK molecular chaperone DnaK; Provisional	99.27
PLN03184	673	chloroplast Hsp70; Provisional	99.26
TIGR02350	595	prok_dnaK chaperone protein DnaK. Members of this	99.23
TIGR01991	599	HscA Fe-S protein assembly chaperone HscA. The Hea	99.17
PRK05183	616	hscA chaperone protein HscA; Provisional	99.13
CHL00094	621	dnaK heat shock protein 70	99.13
KOG0104|consensus	902		98.52
PRK01433	595	hscA chaperone protein HscA; Provisional	98.31
COG0443	579	DnaK Molecular chaperone [Posttranslational modifi	98.13
PRK11678	450	putative chaperone; Provisional	91.86
PF03484	70	B5: tRNA synthetase B5 domain; InterPro: IPR005147	81.09

>KOG0100|consensus

Probab=99.86  E-value=3.7e-22  Score=145.41  Aligned_cols=74  Identities=57%  Similarity=0.838  Sum_probs=68.9

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEeeCCCcceEEEEEC-CcceEEchHhHHHHHHhHhHHH---hhcc
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYK-GETKSFFPEEVGIMWWSLEPVL---YLAL   74 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~~~g~~~~~v~~~-~~~~~~speeI~a~iL~~lk~~---~~~~   74 (80)
                      +||+||||++||||||+|+|+.||+..+.|||++++.+|.|.++|... |+.+.|+|||||||||.+||++   |||-
T Consensus        93 ~NPenTiFD~KRLIGr~~~d~~vq~Dik~~Pfkvv~k~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGk  170 (663)
T KOG0100|consen   93 SNPENTIFDAKRLIGRKFNDKSVQKDIKFLPFKVVNKDGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGK  170 (663)
T ss_pred             cCcccceechHHHhCcccCChhhhhhhhcCceEEEcCCCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            599999999999999999999999999999999999999999999977 6789999999999999999764   7764

>KOG0103|consensus

Probab=99.62  E-value=3.4e-16  Score=118.55  Aligned_cols=73  Identities=41%  Similarity=0.548  Sum_probs=69.2

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHHhhc
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLYLA   73 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~~~~   73 (80)
                      +|++||+.++|||+||.|+||.+|.+.+.+|+.++. .||.+++.+.|.|+...|+|+||.||+|.++|.+--.
T Consensus        58 ~n~kntv~~~KRl~Gr~f~dP~~q~~~~~~~~~vv~~~dg~vgi~v~ylge~~~ft~~Qv~Am~l~klk~~ae~  131 (727)
T KOG0103|consen   58 TNVKNTVSNFKRLIGRKFSDPEVQREIKSLPRSVVQLKDGDVGIKVEYLGEKHPFTPEQVLAMLLTKLKATAEK  131 (727)
T ss_pred             ecccccchhhhhhhccccCChHhhhcccccchheeecCCCCcceeehcccCCCCCChHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999998 8999999999999999999999999999999887543

>KOG0102|consensus

Probab=99.57  E-value=1.7e-15  Score=112.83  Aligned_cols=66  Identities=36%  Similarity=0.652  Sum_probs=62.1

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      .||.||+|..||+|||+|+||++|++.+.+||+++. .||..|++.    +++.+||.||++|+|.+||+.
T Consensus        85 ~n~~ntffatKrligRrf~d~evq~~~k~vpyKiVk~~ngdaw~e~----~G~~~spsqig~~vl~kmk~t  151 (640)
T KOG0102|consen   85 TNPENTFFATKRLIGRRFDDPEVQKDIKQVPYKIVKASNGDAWVEA----RGKQYSPSQIGAFVLMKMKET  151 (640)
T ss_pred             cCCCceEEEehhhhhhhccCHHHHHHHHhCCcceEEccCCcEEEEe----CCeEecHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999988 899999998    478999999999999999864

>PTZ00009 heat shock 70 kDa protein; Provisional

Probab=99.54  E-value=1.6e-14  Score=109.72  Aligned_cols=70  Identities=57%  Similarity=0.975  Sum_probs=65.1

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||+||++++||+||++|+|+.++...+.|||.++. .+|.+.+.+.+.++.+.|+||||+|++|++||+.
T Consensus        61 ~~p~~ti~~~KrliG~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~peel~a~iL~~lk~~  131 (653)
T PTZ00009         61 RNPENTVFDAKRLIGRKFDDSVVQSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEISSMVLQKMKEI  131 (653)
T ss_pred             hCcccEEhhhHHHhCCCCCchhHhhhhhcCceEEEEcCCCceEEEEEeCCceEEECHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999887 7899999999888888999999999999999865

>KOG0101|consensus

Probab=99.51  E-value=4.5e-15  Score=112.02  Aligned_cols=74  Identities=65%  Similarity=1.002  Sum_probs=67.8

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHH---Hhhcc
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPV---LYLAL   74 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~---~~~~~   74 (80)
                      +||.|||+++||+|||.|+||.+|..+++|||.+.. .++.+.+++.++++.+.|+|+++++++|.+||+   .|++.
T Consensus        64 ~np~ntv~~~krliGr~f~d~~v~~~~k~~pf~V~~~~~~~~~i~~~~~~~~~~f~peeiss~~L~klke~Ae~~Lg~  141 (620)
T KOG0101|consen   64 RNPDNTVFDAKRLIGRFFDDPEVQSDMKLWPFKVISDQGGKPKIQVTYKGETKSFNPEEISSMVLTKLKETAEAYLGK  141 (620)
T ss_pred             cCCcceeeehhhhcCccccchhhHhHhhcCCcccccccCCcceEEecccccceeeeeeeeeehhccccHHHHHHHhcC
Confidence            589999999999999999999999999999999986 677899999999999999999999999999865   46654

>PTZ00400 DnaK-type molecular chaperone; Provisional

Probab=99.47  E-value=9.5e-14  Score=105.74  Aligned_cols=71  Identities=31%  Similarity=0.608  Sum_probs=62.3

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH---hhccC
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL---YLALT   75 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~---~~~~~   75 (80)
                      +||+||++++|||||++++|+.++...+.|||+++. ++|.+.+.+.    .+.|+||||+||+|++||+.   +++.+
T Consensus        99 ~~p~~ti~~~KrliG~~~~d~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~speel~a~iL~~lk~~ae~~lg~~  173 (663)
T PTZ00400         99 TNPENTVFATKRLIGRRYDEDATKKEQKILPYKIVRASNGDAWIEAQ----GKKYSPSQIGAFVLEKMKETAESYLGRK  173 (663)
T ss_pred             hCCcceehhhhhhcCCCcCcHHHHhhhccCCeEEEecCCCceEEEEC----CEEECHHHHHHHHHHHHHHHHHHHhCCC
Confidence            489999999999999999999999999999999987 7888888774    57899999999999999865   45543

>PTZ00186 heat shock 70 kDa precursor protein; Provisional

Probab=99.40  E-value=8.8e-13  Score=100.58  Aligned_cols=71  Identities=32%  Similarity=0.623  Sum_probs=60.6

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHH---Hhhcc
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPV---LYLAL   74 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~---~~~~~   74 (80)
                      +||+||++++||+||++++|+.++...+.|||+++. .+|.+.+..   +..+.|+|+||+|++|++||+   .|++.
T Consensus        84 ~~p~~ti~~~KRliG~~~~d~~v~~~~~~~p~~vv~~~~~~~~i~~---~~~~~~speeisa~iL~~Lk~~Ae~~lg~  158 (657)
T PTZ00186         84 TNPQSTFYAVKRLIGRRFEDEHIQKDIKNVPYKIVRAGNGDAWVQD---GNGKQYSPSQIGAFVLEKMKETAENFLGH  158 (657)
T ss_pred             hCchhHHHHHHHHhccccccHHHHHhhccCcEEEEEcCCCceEEEe---CCCeEEcHHHHHHHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999999987 777776653   235789999999999999976   45554

>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins

Probab=99.34  E-value=2.1e-12  Score=96.04  Aligned_cols=71  Identities=44%  Similarity=0.753  Sum_probs=65.8

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHHh
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLY   71 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~~   71 (80)
                      .||+|+++++|||||+.++++.++.+.+.+||+++. ++|.+.+++.+.++.+.++|+|++|++|+++++..
T Consensus        56 ~~~~~~~~~~k~liG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a  127 (602)
T PF00012_consen   56 RNPKNTIYNLKRLIGRKFDDPDVQKEKKKFPYKVVEDPDGKVYFEVDYDGKSKTYSPEELSAMILKYLKEMA  127 (602)
T ss_dssp             TSGGGEEESGGGTTTSBTTSHHHHHHHTTSSSEEEEETTTEEEEEEEETTEEEEEEHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccchhhhcccccccccccccccccccccccceeeeeecccccchhhhcccc
Confidence            479999999999999999999999999999999988 69999999998888889999999999999998653

Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....

>PRK13410 molecular chaperone DnaK; Provisional

Probab=99.32  E-value=3.4e-12  Score=97.50  Aligned_cols=71  Identities=31%  Similarity=0.595  Sum_probs=59.0

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHH---HhhccC
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPV---LYLALT   75 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~---~~~~~~   75 (80)
                      +||+||++++||+||++++|  ++.+.+.+||.++. ++|.+.+.+.  ...+.|+||||+|++|++||+   .|++..
T Consensus        60 ~~p~~ti~~~KRliG~~~~~--~~~~~~~~~~~v~~~~~g~~~i~~~--~~~~~~speel~a~iL~~lk~~ae~~lg~~  134 (668)
T PRK13410         60 LNPQNTFYNLKRFIGRRYDE--LDPESKRVPYTIRRNEQGNVRIKCP--RLEREFAPEELSAMILRKLADDASRYLGEP  134 (668)
T ss_pred             hCccceehHHhhhhCCCchh--hHHhhccCCeEEEECCCCcEEEEEe--cCCeEEcHHHHHHHHHHHHHHHHHHHhCCC
Confidence            48999999999999999987  66677899999987 7888887764  335789999999999999985   455543

>PRK13411 molecular chaperone DnaK; Provisional

Probab=99.31  E-value=4.2e-12  Score=96.63  Aligned_cols=68  Identities=28%  Similarity=0.528  Sum_probs=56.8

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH---hhcc
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL---YLAL   74 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~---~~~~   74 (80)
                      +||+||++++||+||++++|+.  .+.+++||.++. .+|.+.+.+.    .+.|+|+||+|++|++||+.   |++.
T Consensus        60 ~~p~~ti~~~KrliG~~~~d~~--~~~~~~~~~~v~~~~~~~~~~i~----~~~~~peei~a~iL~~lk~~ae~~lg~  131 (653)
T PRK13411         60 TNAENTVYSIKRFIGRRWDDTE--EERSRVPYTCVKGRDDTVNVQIR----GRNYTPQEISAMILQKLKQDAEAYLGE  131 (653)
T ss_pred             hCcccchHHHHHHhCCCccchh--HHhhcCCceEEecCCCceEEEEC----CEEECHHHHHHHHHHHHHHHHHHHhCC
Confidence            4899999999999999999964  456889999887 7788777774    46899999999999999764   5554

>PRK00290 dnaK molecular chaperone DnaK; Provisional

Probab=99.27  E-value=1.2e-11  Score=93.47  Aligned_cols=64  Identities=38%  Similarity=0.645  Sum_probs=56.1

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||+||++++||+||++  ++.++...+.|||+++. ++|...+.+.    .+.++||||+|++|++||+.
T Consensus        60 ~~p~~~i~~~Kr~iG~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~peel~a~iL~~lk~~  124 (627)
T PRK00290         60 TNPENTIFSIKRLMGRR--DEEVQKDIKLVPYKIVKADNGDAWVEID----GKKYTPQEISAMILQKLKKD  124 (627)
T ss_pred             hCchhhHHHHHHHhCCC--chHHHHHhhcCCeEEEEcCCCceEEEEC----CEEEcHHHHHHHHHHHHHHH
Confidence            48999999999999999  67789999999999988 7788777663    47899999999999999864

>PLN03184 chloroplast Hsp70; Provisional

Probab=99.26  E-value=1.4e-11  Score=94.16  Aligned_cols=66  Identities=32%  Similarity=0.462  Sum_probs=56.7

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||+||++++||+||++++|  ++.+.+.|||+++. ++|.+.+.+...  .+.|+|+||+|++|++|++.
T Consensus        97 ~~p~~ti~~~KrliG~~~~d--~~~~~~~~~~~v~~~~~~~v~~~~~~~--~~~~speei~a~iL~~lk~~  163 (673)
T PLN03184         97 VNPENTFFSVKRFIGRKMSE--VDEESKQVSYRVVRDENGNVKLDCPAI--GKQFAAEEISAQVLRKLVDD  163 (673)
T ss_pred             hCchhhhHHHHHhhCCCcch--hhhhhhcCCeEEEecCCCcEEEEEecC--CeEEcHHHHHHHHHHHHHHH
Confidence            48999999999999999987  66778899999987 788887776543  46899999999999999874

>TIGR02350 prok_dnaK chaperone protein DnaK

Probab=99.23  E-value=2e-11  Score=91.69  Aligned_cols=64  Identities=38%  Similarity=0.707  Sum_probs=55.6

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEeeCCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||+||++++||+||+++++  ++...+.+||++..++|.+.+.+.    .+.++|+||+|++|++||+.
T Consensus        58 ~~p~~~i~~~Kr~iG~~~~~--~~~~~~~~~~~v~~~~~~~~~~v~----~~~~~peel~a~~L~~l~~~  121 (595)
T TIGR02350        58 TNPENTIYSIKRFMGRRFDE--VTEEAKRVPYKVVGDGGDVRVKVD----GKEYTPQEISAMILQKLKKD  121 (595)
T ss_pred             hCchhhhHHHHHHhCCCchH--HHHHhhcCCeeEEcCCCceEEEEC----CEEecHHHHHHHHHHHHHHH
Confidence            48999999999999999954  778889999996668888888874    57899999999999999864

Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.

>TIGR01991 HscA Fe-S protein assembly chaperone HscA

Probab=99.17  E-value=7.3e-11  Score=89.14  Aligned_cols=63  Identities=25%  Similarity=0.372  Sum_probs=53.3

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||+|||+++||+||++++|+.  . .+.+||.++. .+|.+.+++.    ...++|+||+|++|++||+.
T Consensus        57 ~~p~~ti~~~Kr~iG~~~~d~~--~-~~~~~~~~~~~~~~~~~~~~~----~~~~~p~ei~a~iL~~lk~~  120 (599)
T TIGR01991        57 EDPKNTISSVKRLMGRSIEDIK--T-FSILPYRFVDGPGEMVRLRTV----QGTVTPVEVSAEILKKLKQR  120 (599)
T ss_pred             hChhhhHHHHHHHhCCCccchh--h-cccCCEEEEEcCCCceEEEeC----CCEEcHHHHHHHHHHHHHHH
Confidence            4799999999999999998843  3 6779999987 7888888774    23789999999999999864

The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.

>PRK05183 hscA chaperone protein HscA; Provisional

Probab=99.13  E-value=1.2e-10  Score=88.25  Aligned_cols=65  Identities=29%  Similarity=0.422  Sum_probs=55.2

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHHh
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLY   71 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~~   71 (80)
                      +||+||++++||+||++++|  ++...+.+||.+.. ++|.+.+.+.    ...++|+||+|++|++||+.-
T Consensus        76 ~~p~~ti~~~KrliG~~~~d--~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~p~ei~a~iL~~lk~~a  141 (616)
T PRK05183         76 QDPKNTISSVKRFMGRSLAD--IQQRYPHLPYQFVASENGMPLIRTA----QGLKSPVEVSAEILKALRQRA  141 (616)
T ss_pred             hCchhhHHHHHHHhCCCchh--hhhhhhcCCeEEEecCCCceEEEec----CCeEcHHHHHHHHHHHHHHHH
Confidence            47999999999999999988  55566789999887 6898888874    237899999999999998753

>CHL00094 dnaK heat shock protein 70

Probab=99.13  E-value=1e-10  Score=88.52  Aligned_cols=66  Identities=32%  Similarity=0.510  Sum_probs=55.9

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||+||++++||+||++++|  ++...+.|||.++. ++|.+.+.+...  .+.++|+||+|++|+++++.
T Consensus        60 ~~p~~ti~~~KrliG~~~~~--~~~~~~~~~~~v~~~~~g~i~~~~~~~--~~~~s~eei~a~iL~~l~~~  126 (621)
T CHL00094         60 INPENTFYSVKRFIGRKFSE--ISEEAKQVSYKVKTDSNGNIKIECPAL--NKDFSPEEISAQVLRKLVED  126 (621)
T ss_pred             hCccceehhhHHhcCCChHH--HHhhhhcCCeEEEECCCCCEEEEEecC--CeEEcHHHHHHHHHHHHHHH
Confidence            38999999999999999987  66677889999987 778887776433  46899999999999999874

>KOG0104|consensus

Probab=98.52  E-value=3.2e-07  Score=71.26  Aligned_cols=66  Identities=26%  Similarity=0.382  Sum_probs=55.3

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCe-EEeeC--CCcceEEEEECCcceEEchHhHHHHHHhHhHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPF-TVVSD--GGKPKIQVEYKGETKSFFPEEVGIMWWSLEPV   69 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf-~i~~~--~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~   69 (80)
                      ++|++++..+|.|+|++.+||.++.+.+++|| .++.+  .+.+.|.+.  + ...||+||+.||+|.+.+.
T Consensus        80 r~P~~~~~~l~~llgk~~~~~~v~ly~~~~p~~e~v~d~~rstV~F~i~--d-~~~ysvEellAMil~~a~~  148 (902)
T KOG0104|consen   80 RFPQSTYRQLKDLLGKSLDDPTVDLYQKRFPFFELVEDPQRSTVVFKIS--D-QEEYSVEELLAMILQYAKS  148 (902)
T ss_pred             cCcHHHHHHHHHHhCcccCCcHHHHHHhcCCceeecccCccceEEEEeC--C-ccccCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999996 56664  456666653  3 5789999999999998754

>PRK01433 hscA chaperone protein HscA; Provisional

Probab=98.31  E-value=8.4e-07  Score=67.44  Aligned_cols=58  Identities=14%  Similarity=0.198  Sum_probs=38.3

Q ss_pred             hHHhhHHhhCCCCCCH----HHHhhcccCCeEEeeCCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          6 TIFDAKRLIGRKFDDA----TVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         6 Ti~~~KRliGr~~~d~----~vq~~~~~~pf~i~~~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      |++++||+||++++|.    .+....+.+   +...++...+.+  .  .+.|+|+||+|++|++||+.
T Consensus        71 ti~~~KrliG~~~~~~~~~~~~~~~~k~~---~~~~~~~~~~~~--~--~~~~speei~a~iL~~lk~~  132 (595)
T PRK01433         71 GLRSIKRLFGKTLKEILNTPALFSLVKDY---LDVNSSELKLNF--A--NKQLRIPEIAAEIFIYLKNQ  132 (595)
T ss_pred             hHHHHHHHhCCCchhhccchhhHhhhhhe---eecCCCeeEEEE--C--CEEEcHHHHHHHHHHHHHHH
Confidence            8999999999999873    222221111   111233333333  2  46899999999999999875

>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=98.13  E-value=1.7e-06  Score=65.66  Aligned_cols=47  Identities=38%  Similarity=0.514  Sum_probs=36.2

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEeeCCCc-ceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGK-PKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~~~g~-~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||.||++++||+||+.                   .++. ..+.+  .  .+.++|+||+|++|++||+.
T Consensus        64 ~~p~~t~~~~kr~~G~~-------------------~~~~~~~~~~--~--~~~~~~eeisa~~L~~lk~~  111 (579)
T COG0443          64 DNPENTIFSIKRKIGRG-------------------SNGLKISVEV--D--GKKYTPEEISAMILTKLKED  111 (579)
T ss_pred             hCCcceEEEEehhcCCC-------------------CCCCcceeee--C--CeeeCHHHHHHHHHHHHHHH
Confidence            48999999999999997                   1111 23333  2  37899999999999999764

>PRK11678 putative chaperone; Provisional

Probab=91.86  E-value=0.15  Score=37.96  Aligned_cols=17  Identities=6%  Similarity=-0.259  Sum_probs=14.5

Q ss_pred             chHhHHHHHHhHhHHHh
Q psy15349         55 FPEEVGIMWWSLEPVLY   71 (80)
Q Consensus        55 speeI~a~iL~~lk~~~   71 (80)
                      .||++++++|++||+..
T Consensus       125 ~~e~l~a~iL~~lk~~a  141 (450)
T PRK11678        125 LFEDLVCAMMLHIKQQA  141 (450)
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            38999999999998753

>PF03484 B5: tRNA synthetase B5 domain; InterPro: IPR005147 Domain B5 is found in phenylalanine-tRNA synthetase beta subunits

Probab=81.09  E-value=7.2  Score=21.51  Aligned_cols=58  Identities=16%  Similarity=0.119  Sum_probs=36.6

Q ss_pred             HHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHh
Q psy15349          7 IFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWS   65 (80)
Q Consensus         7 i~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~   65 (80)
                      ...++|++|..++..++...++++-|.+.. .++...+.+-.-- .=...++++...|++
T Consensus         8 ~~~i~~~lG~~i~~~~i~~~L~~lg~~~~~~~~~~~~v~vP~~R-~Di~~~~DliEEiaR   66 (70)
T PF03484_consen    8 LDKINKLLGIDISPEEIIKILKRLGFKVEKIDGDTLEVTVPSYR-FDIEHEEDLIEEIAR   66 (70)
T ss_dssp             HHHHHHHHTS---HHHHHHHHHHTT-EEEE-CTTEEEEEEETTS-TT-SSHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHCCCEEEECCCCEEEEEcCCCc-CCcCcccHHHHHHHH
Confidence            456889999999999999999999999988 5666555554211 223456666665543

This domain has been shown to bind DNA through a winged helix-turn-helix motif []. Phenylalanine-tRNA synthetase may influence common cellular processes via DNA binding, in addition to its aminoacylation function.; GO: 0000287 magnesium ion binding, 0003723 RNA binding, 0005524 ATP binding, 0006432 phenylalanyl-tRNA aminoacylation; PDB: 2AKW_B 1B70_B 1B7Y_B 2ALY_B 2IY5_B 2AMC_B 3PCO_D 2CXI_C 1JJC_B 1EIY_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	80
3i33_A	404	Crystal Structure Of The Human 70kda Heat Shock Pro		2e-29
1bup_A	386	T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot		4e-28
1ngd_A	386	Structural Basis Of The 70-kilodalton Heat Shock Co		4e-28
1ngg_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-28
1ngf_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-28
1ats_A	386	Threonine 204 Of The Chaperone Protein Hsc70 Influe		4e-28
1nga_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-28
1ngb_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-28
1atr_A	386	Threonine 204 Of The Chaperone Protein Hsc70 Influe		4e-28
2bup_A	381	T13g Mutant Of The Atpase Fragment Of Bovine Hsc70		4e-28
3fzf_A	381	Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP		4e-28
3cqx_A	386	Chaperone Complex Length = 386		4e-28
2qwn_A	394	Crystal Structure Of Disulfide-Bond-Crosslinked Com		4e-28
2qw9_B	394	Crystal Structure Of Bovine Hsc70 (1-394aa)in The A		4e-28
1ba0_A	386	Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi		4e-28
1hpm_A	386	How Potassium Affects The Activity Of The Molecular		4e-28
1ngc_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-28
1ngh_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-28
1qqo_A	378	E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro		4e-28
1nge_A	386	Structural Basis Of The 70-Kilodalton Heat Shock Co		4e-28
1ba1_A	386	Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi		5e-28
1hx1_A	400	Crystal Structure Of A Bag Domain In Complex With T		5e-28
1yuw_A	554	Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214		6e-28
2v7z_A	543	Crystal Structure Of The 70-Kda Heat Shock Cognate		6e-28
1qqm_A	378	D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro		9e-28
1kaz_A	381	70kd Heat Shock Cognate Protein Atpase Domain, K71e		1e-27
4fsv_A	387	Crystal Structure Of A Heat Shock 70kda Protein 2 (		2e-27
1kay_A	381	70kd Heat Shock Cognate Protein Atpase Domain, K71a		2e-27
1qqn_A	378	D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro		2e-27
1kax_A	381	70kd Heat Shock Cognate Protein Atpase Domain, K71m		2e-27
3c7n_B	554	Structure Of The Hsp110:hsc70 Nucleotide Exchange C		4e-27
1s3x_A	382	The Crystal Structure Of The Human Hsp70 Atpase Dom		3e-25
1hjo_A	380	Atpase Domain Of Human Heat Shock 70kda Protein 1 L		3e-25
3a8y_A	392	Crystal Structure Of The Complex Between The Bag5 B		3e-25
3jxu_A	409	Crystal Structure Of The Human 70kda Heat Shock Pro		3e-25
3d2f_B	382	Crystal Structure Of A Complex Of Sse1p And Hsp70 L		3e-25
2e8a_A	391	Crystal Structure Of The Human Hsp70 Atpase Domain		3e-25
2e88_A	391	Crystal Structure Of The Human Hsp70 Atpase Domain		3e-25
3fe1_A	403	Crystal Structure Of The Human 70kda Heat Shock Pro		7e-25
3d2e_B	382	Crystal Structure Of A Complex Of Sse1p And Hsp70,		4e-24
3gdq_A	408	Crystal Structure Of The Human 70kda Heat Shock Pro		6e-24
3gl1_A	387	Crystal Structure Of Atpase Domain Of Ssb1 Chaperon		3e-19
3kvg_A	400	Crystal Structure Of The N-Terminal Domain Of Hsp70		1e-17
3qfu_A	394	Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE		8e-17
3qfp_A	390	Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D		8e-17
3ldl_A	384	Crystal Structure Of Human Grp78 (70kda Heat Shock		4e-13
3iuc_A	408	Crystal Structure Of The Human 70kda Heat Shock Pro		4e-13
2kho_A	605	Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP		3e-06
1dkg_D	383	Crystal Structure Of The Nucleotide Exchange Factor		3e-06
4b9q_A	605	Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L		3e-06

>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404

Iteration: 1
 Score =  123 bits (309), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/62 (83%), Positives = 58/62 (93%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGETK+FFPEE+ 
Sbjct: 80  MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEIS 139
Query: 61  IM 62
            M
Sbjct: 140 SM 141

>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|3CQX|A Chain A, Chaperone Complex Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 66  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 125
Query: 61  IM 62
            M
Sbjct: 126 SM 127

>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State Length = 394

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 58  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 117
Query: 61  IM 62
            M
Sbjct: 118 SM 119

>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386

Iteration: 1
 Score =  119 bits (298), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400

Iteration: 1
 Score =  119 bits (298), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 80  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 139
Query: 61  IM 62
            M
Sbjct: 140 SM 141

>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554

Iteration: 1
 Score =  119 bits (297), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543

Iteration: 1
 Score =  118 bits (296), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378

Iteration: 1
 Score =  118 bits (295), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 55/62 (88%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G PK+QVEYKGETKSF+PEEV 
Sbjct: 58  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVS 117
Query: 61  IM 62
            M
Sbjct: 118 SM 119

>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381

Iteration: 1
 Score =  117 bits (294), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/62 (77%), Positives = 56/62 (90%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDA+RLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAERLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387

Iteration: 1
 Score =  117 bits (293), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/58 (84%), Positives = 55/58 (94%)
Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEV 59
           NP NTIFDAKRLIGRKF+DATVQ+D KHWPF VVS+GGKPK+QVEYKGETK+FFPEE+
Sbjct: 63  NPTNTIFDAKRLIGRKFEDATVQSDXKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEI 120

>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381

Iteration: 1
 Score =  117 bits (292), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/62 (77%), Positives = 55/62 (88%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDA RLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAARLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378

Iteration: 1
 Score =  117 bits (292), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 54/62 (87%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR FDDA VQ+DMKHWPF VV+D G PK+QVEYKGETKSF+PEEV 
Sbjct: 58  MNPTNTVFDAKRLIGRAFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVS 117
Query: 61  IM 62
            M
Sbjct: 118 SM 119

>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381

Iteration: 1
 Score =  117 bits (292), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/62 (77%), Positives = 55/62 (88%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDA RLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAMRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554

Iteration: 1
 Score =  116 bits (290), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 49/65 (75%), Positives = 57/65 (87%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61  IMWWS 65
            M  +
Sbjct: 121 SMVLT 125

>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382

Iteration: 1
 Score =  110 bits (274), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           +NP NT+FDAKRLIGRKF D  VQ+DMKHWPF V++DG KPK+QV YKGETK+F+PEE+ 
Sbjct: 61  LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380

Iteration: 1
 Score =  110 bits (274), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           +NP NT+FDAKRLIGRKF D  VQ+DMKHWPF V++DG KPK+QV YKGETK+F+PEE+ 
Sbjct: 59  LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 118
Query: 61  IM 62
            M
Sbjct: 119 SM 120

>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392

Iteration: 1
 Score =  110 bits (274), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           +NP NT+FDAKRLIGRKF D  VQ+DMKHWPF V++DG KPK+QV YKGETK+F+PEE+ 
Sbjct: 65  LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 124
Query: 61  IM 62
            M
Sbjct: 125 SM 126

>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409

Iteration: 1
 Score =  110 bits (274), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           +NP NT+FDAKRLIGRKF D  VQ+DMKHWPF V++DG KPK+QV YKGETK+F+PEE+ 
Sbjct: 83  LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 142
Query: 61  IM 62
            M
Sbjct: 143 SM 144

>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382

Iteration: 1
 Score =  110 bits (274), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           +NP NT+FDAKRLIGRKF D  VQ+DMKHWPF V++DG KPK+QV YKGETK+F+PEE+ 
Sbjct: 61  LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 61  IM 62
            M
Sbjct: 121 SM 122

>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391

Iteration: 1
 Score =  110 bits (274), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           +NP NT+FDAKRLIGRKF D  VQ+DMKHWPF V++DG KPK+QV YKGETK+F+PEE+ 
Sbjct: 64  LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 123
Query: 61  IM 62
            M
Sbjct: 124 SM 125

>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391

Iteration: 1
 Score =  110 bits (274), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           +NP NT+FDAKRLIGRKF D  VQ+DMKHWPF V++DG KPK+QV YKGETK+F+PEE+ 
Sbjct: 64  LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 123
Query: 61  IM 62
            M
Sbjct: 124 SM 125

>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403

Iteration: 1
 Score =  108 bits (270), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 55/62 (88%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           +NP+NT+FDAKRLIGRKF D TVQ+DMKHWPF VVS+GGKPK++V Y+GE K+F+PEE+ 
Sbjct: 81  LNPHNTVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGKPKVRVCYRGEDKTFYPEEIS 140
Query: 61  IM 62
            M
Sbjct: 141 SM 142

>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382

Iteration: 1
 Score =  106 bits (264), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/59 (71%), Positives = 51/59 (86%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEV 59
           +NP NT+FDAKRLIGRKF D  VQ+D KHWPF V++DG KPK+QV YKGETK+F+PEE+
Sbjct: 61  LNPQNTVFDAKRLIGRKFGDPVVQSDXKHWPFQVINDGDKPKVQVSYKGETKAFYPEEI 119

>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408

Iteration: 1
 Score =  105 bits (262), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/62 (69%), Positives = 52/62 (83%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGRKF+D  VQADMK WPF V+++GGKPK+ V YKGE K+F+PEE+ 
Sbjct: 85  MNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEEIS 144
Query: 61  IM 62
            M
Sbjct: 145 SM 146

>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/62 (59%), Positives = 47/62 (75%)
Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           +NP NT+FDAKRLIGR+FDD +VQ DMK WPF V+   G P I+V+Y  ETK+F P+E+ 
Sbjct: 66  LNPRNTVFDAKRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEIS 125
Query: 61  IM 62
            M
Sbjct: 126 AM 127

>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVEYKGETKSFFPEEVG 60
           NP NT+FDAKRLIGRKFDD  VQ+DM HWPF VV     KP I V Y GE K F  EE+ 
Sbjct: 77  NPENTVFDAKRLIGRKFDDQAVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEIS 136
Query: 61  IM 62
            M
Sbjct: 137 AM 138

>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/61 (59%), Positives = 44/61 (72%)
Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGI 61
           NP NTIFD KRLIG K++D +VQ D+KH PF VV+  GKP ++V  KGE K F PEE+  
Sbjct: 72  NPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISG 131
Query: 62  M 62
           M
Sbjct: 132 M 132

>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEY-KGETKSFFPEEVG 60
           NP NT+FDAKRLIGR ++D +VQ D+K  PF VV    KP IQV+   G+TK+F PEE+ 
Sbjct: 64  NPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEIS 123
Query: 61  IMWWS 65
            M  +
Sbjct: 124 AMVLT 128

>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEY-KGETKSFFPEEVG 60
           NP NT+FDAKRLIGR ++D +VQ D+K  PF VV    KP IQV+   G+TK+F PEE+ 
Sbjct: 85  NPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEIS 144
Query: 61  IMWWS 65
            M  +
Sbjct: 145 AMVLT 149

>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVE 46
           NP NT+F  KRLIGR+F D  VQ D+   PF ++ +D G   ++V+
Sbjct: 61  NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVK 106

>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVE 46
           NP NT+F  KRLIGR+F D  VQ D+   PF ++ +D G   ++V+
Sbjct: 61  NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVK 106

>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 2   NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVE 46
           NP NT+F  KRLIGR+F D  VQ D+   PF ++ +D G   ++V+
Sbjct: 61  NPQNTLFAIKRLIGRRFQDEEVQRDVSIXPFKIIAADNGDAWVEVK 106

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	80
3i33_A	404	Heat shock-related 70 kDa protein 2; protein-ADP c	4e-42
3qfu_A	394	78 kDa glucose-regulated protein homolog; HSP70, K	2e-41
1yuw_A	554	Heat shock cognate 71 kDa protein; chaperone; 2.60	2e-40
3d2f_A	675	Heat shock protein homolog SSE1; nucleotide exchan	3e-35
1dkg_D	383	Molecular chaperone DNAK; HSP70, GRPE, nucleotide	2e-15
2kho_A	605	Heat shock protein 70; molecular chaperone, HSP70,	1e-14

>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404

 Score =  139 bits (354), Expect = 4e-42
 Identities = 52/62 (83%), Positives = 58/62 (93%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NTIFDAKRLIGRKF+DATVQ+DMKHWPF VVS+GGKPK+QVEYKGETK+FFPEE+ 
Sbjct: 80  MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEIS 139

Query: 61  IM 62
            M
Sbjct: 140 SM 141

>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554

 Score =  137 bits (348), Expect = 2e-40
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 61  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120

Query: 61  IM 62
            M
Sbjct: 121 SM 122

>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675

 Score =  124 bits (313), Expect = 3e-35
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEV 59
            N  NT+ + KR+IG  +     + + KH+   +V  D  K   +V + GE   F   ++
Sbjct: 59  SNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQL 118

Query: 60  GIM 62
             M
Sbjct: 119 AAM 121

>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383

 Score = 68.0 bits (167), Expect = 2e-15
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVEYKGETKSFFPEEV 59
            NP NT+F  KRLIGR+F D  VQ D+   PF ++ +D G   ++V    + +   P ++
Sbjct: 60  TNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV----KGQKMAPPQI 115

Query: 60  GIM 62
              
Sbjct: 116 SAE 118

>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605

 Score = 65.7 bits (161), Expect = 1e-14
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVEYKGETKSFFPEEV 59
            NP NT+F  KRLIGR+F D  VQ D+   PF ++ +D G   ++V    + +   P ++
Sbjct: 60  TNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV----KGQKMAPPQI 115

Query: 60  GIM 62
              
Sbjct: 116 SAE 118

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	80
3d2f_A	675	Heat shock protein homolog SSE1; nucleotide exchan	99.54
1yuw_A	554	Heat shock cognate 71 kDa protein; chaperone; 2.60	99.53
3i33_A	404	Heat shock-related 70 kDa protein 2; protein-ADP c	99.4
4b9q_A	605	Chaperone protein DNAK; HET: ATP; 2.40A {Escherich	99.4
3qfu_A	394	78 kDa glucose-regulated protein homolog; HSP70, K	99.34
2kho_A	605	Heat shock protein 70; molecular chaperone, HSP70,	99.32
1dkg_D	383	Molecular chaperone DNAK; HSP70, GRPE, nucleotide	99.13
4gni_A	409	Putative heat shock protein; HSP70-type ATPase, AT	98.73
2v7y_A	509	Chaperone protein DNAK; HSP70, heat shock protein,	97.39

>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*

Probab=99.54  E-value=7.3e-15  Score=110.70  Aligned_cols=74  Identities=23%  Similarity=0.352  Sum_probs=67.5

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH---hhcc
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL---YLAL   74 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~---~~~~   74 (80)
                      +||+||++++||+||+.++|+.+|.+.++|||+++. ++|.+++.+.+.|+.+.|+|+||+|++|++||+.   |++.
T Consensus        59 ~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~  136 (675)
T 3d2f_A           59 SNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKA  136 (675)
T ss_dssp             TCGGGEECCHHHHTTCBTTCTTHHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             hChHhHHHHHHHHhCCCCCcHHHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999999988 7899999998888888999999999999999864   5553

>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*

Probab=99.53  E-value=8.7e-15  Score=107.83  Aligned_cols=70  Identities=70%  Similarity=1.163  Sum_probs=65.5

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEeeCCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||+||++++||+||++|+|+.++...+.|||+++..+|.+.+.+.+.+..+.++|+||+|++|++||+.
T Consensus        61 ~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~  130 (554)
T 1yuw_A           61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEI  130 (554)
T ss_dssp             TCGGGEECCGGGTTTCCSSCSHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHH
T ss_pred             hChhhehHhhHHhcCCCCCcHHHHHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999888899999999988889999999999999999853

>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...

Probab=99.40  E-value=3.6e-13  Score=94.63  Aligned_cols=71  Identities=73%  Similarity=1.179  Sum_probs=66.3

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEeeCCCcceEEEEECCcceEEchHhHHHHHHhHhHHHh
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLY   71 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~~   71 (80)
                      .+|.|+++++||+||+.++|+.++...+.|||.++.++|.+.+.+.+.++...++|+||++++|+++++..
T Consensus        80 ~~~~~~~~~~Kr~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a  150 (404)
T 3i33_A           80 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIA  150 (404)
T ss_dssp             TCSTTEECCGGGTTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHH
T ss_pred             hChhhhHHHHHHHhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHH
Confidence            37999999999999999999999999999999999999999999999888899999999999999998753

>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D

Probab=99.40  E-value=2.2e-13  Score=101.33  Aligned_cols=66  Identities=33%  Similarity=0.589  Sum_probs=60.4

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||.||++++||+||++|+||.++...+.+||+++. ++|.+.+.+.    .+.++|+||+|++|++|++.
T Consensus        60 ~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~----~~~~~p~ei~a~iL~~lk~~  126 (605)
T 4b9q_A           60 TNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVK----GQKMAPPQISAEVLKKMKKT  126 (605)
T ss_dssp             TCGGGEECCGGGTTTCBTTSHHHHHHHTTCSSEEEECTTSBEEEEET----TEEECHHHHHHHHHHHHHHH
T ss_pred             hCCCcEehhhHHhhCCCCCCHHHHHHhhcCCeEEEEcCCCceEEEEC----CEEECHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999988 8898888773    57899999999999999765

>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}

Probab=99.32  E-value=1.1e-12  Score=97.62  Aligned_cols=66  Identities=35%  Similarity=0.599  Sum_probs=59.4

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      +||+||++++||+||++|+|+.++...+.+||+++. .+|.+.+.+  .  .+.++|+||+|++|++|++.
T Consensus        60 ~~p~~t~~~~Kr~iG~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~--~--g~~~~~~ei~a~~L~~l~~~  126 (605)
T 2kho_A           60 TNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKT  126 (605)
T ss_dssp             TCGGGEEECGGGTTTCBSSSTTHHHHHHHCSSCEEECTTSBEEEEE--T--TEEECHHHHHHHHHHHHHHH
T ss_pred             hCCCCEeehhhHhhCCCCCcHHHHHHhhcCCeEEEECCCCceEEEE--C--CEEEcHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999886 789888887  3  36899999999999999875

>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1

Probab=99.13  E-value=7.9e-11  Score=82.14  Aligned_cols=66  Identities=35%  Similarity=0.599  Sum_probs=58.3

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      .||+|+++++||+||+.++|++++...+.+||.++. .+|.+.+.+  +  .+.++|+||++++|+++++.
T Consensus        60 ~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~--g~~~~~~~i~~~~L~~l~~~  126 (383)
T 1dkg_D           60 TNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--K--GQKMAPPQISAEVLKKMKKT  126 (383)
T ss_dssp             TCGGGEEECGGGTTTCBSCSHHHHHHTTTCSSEEEECSSSBEEEEE--T--TEEECHHHHHHHHHHHHHHH
T ss_pred             hCccceeehhHHhhCCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEE--C--CEEEcHHHHHHHHHHHHHHH
Confidence            379999999999999999999999998999999876 788887777  3  35899999999999999764

>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}

Probab=98.73  E-value=3e-09  Score=74.87  Aligned_cols=68  Identities=16%  Similarity=0.216  Sum_probs=56.8

Q ss_pred             CcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEeeCCCcceEEEEEC----CcceEEchHhHHHHHHhHhHHHh
Q psy15349          2 NPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYK----GETKSFFPEEVGIMWWSLEPVLY   71 (80)
Q Consensus         2 np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~~~g~~~~~v~~~----~~~~~~speeI~a~iL~~lk~~~   71 (80)
                      ||+|+++++||++|++++|+.++..  .+++.+...+|.+.+.+...    ++.+.++|+||++++|+++++.-
T Consensus        71 ~~~~~i~~~K~llg~~~~~~~~~~~--~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a  142 (409)
T 4gni_A           71 NPKNTVAYFRDILGQDFKSVDPTHN--HASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAA  142 (409)
T ss_dssp             CGGGEEESCGGGTTCCGGGCCCGGG--TTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHH
T ss_pred             ChHhhHHHHHHHhCCCccchhhhhh--ccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHH
Confidence            7999999999999999999776554  45666667889999988765    46789999999999999998764

>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}

Probab=97.39  E-value=0.0001  Score=53.59  Aligned_cols=42  Identities=31%  Similarity=0.608  Sum_probs=32.6

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEeeCCCcceEEEEECCcceEEchHhHHHHHHhHhHHH
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVL   70 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~   70 (80)
                      .|| ||++++||+||+.|.              +         ++  +|  +.++|+||++++|++|++.
T Consensus        59 ~~p-~~~~~~Kr~lg~p~~--------------~---------~~--~g--~~~~~~ei~a~~L~~l~~~  100 (509)
T 2v7y_A           59 TNP-NTIISIKRHMGTDYK--------------V---------EI--EG--KQYTPQEISAIILQYLKSY  100 (509)
T ss_dssp             TCS-SEEECGGGTTTSCCC--------------E---------EE--TT--EEECHHHHHHHHHHHHHHH
T ss_pred             hCC-CcHHHHHHhcCCCcE--------------E---------EE--CC--EEEcHHHHHHHHHHHHHHH
Confidence            378 999999999998432              1         12  22  4789999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	80
d1bupa1	185	c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas	3e-24
d1dkgd1	183	c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas	4e-16

>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 87.4 bits (216), Expect = 3e-24
 Identities = 49/62 (79%), Positives = 56/62 (90%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVG 60
           MNP NT+FDAKRLIGR+FDDA VQ+DMKHWPF VV+D G+PK+QVEYKGETKSF+PEEV 
Sbjct: 58  MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 117

Query: 61  IM 62
            M
Sbjct: 118 SM 119

>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

 Score = 66.6 bits (162), Expect = 4e-16
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)

Query: 1   MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVV-SDGGKPKIQVEYKGETKSFFPEEV 59
            NP NT+F  KRLIGR+F D  VQ D+   PF ++ +D G   ++V    + +   P ++
Sbjct: 58  TNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV----KGQKMAPPQI 113

Query: 60  GIM 62
              
Sbjct: 114 SAE 116

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	80
d1bupa1	185	Heat shock protein 70kDa, ATPase fragment {Cow (Bo	99.53
d1dkgd1	183	Heat shock protein 70kDa, ATPase fragment {Escheri	99.48
d2ja9a2	85	Ribosomal RNA-processing protein 40, RRP40 {Saccha	89.48

>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.53  E-value=9e-15  Score=93.00  Aligned_cols=71  Identities=69%  Similarity=1.136  Sum_probs=66.0

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEeeCCCcceEEEEECCcceEEchHhHHHHHHhHhHHHh
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVSDGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLY   71 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~~   71 (80)
                      .||+||++++|||||++++|+.++...+.+|+.++.++|.....+...+..+.++|+||.|++|+++++..
T Consensus        58 ~~p~~~i~~~KrllG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~el~a~~l~~l~~~a  128 (185)
T d1bupa1          58 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIA  128 (185)
T ss_dssp             TCGGGEECCHHHHTTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHH
T ss_pred             cCcccchhHHHHHhCCCCccHHHHHHhhcCCceEEcCCCCccEEEEEcCCceEEcHHHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999988999899988998999999999999999998753

>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

Probab=99.48  E-value=1.8e-14  Score=91.46  Aligned_cols=67  Identities=33%  Similarity=0.569  Sum_probs=59.9

Q ss_pred             CCcchhHHhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEEEECCcceEEchHhHHHHHHhHhHHHh
Q psy15349          1 MNPNNTIFDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQVEYKGETKSFFPEEVGIMWWSLEPVLY   71 (80)
Q Consensus         1 ~np~nTi~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v~~~~~~~~~speeI~a~iL~~lk~~~   71 (80)
                      +||+||++++||+||+.++|+.++...+.+||+++. ++|.+.+.+.    .+.++||||++++|++|++..
T Consensus        58 ~~p~~~i~~~KrllG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~s~~~l~a~~L~~l~~~a  125 (183)
T d1dkgd1          58 TNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVK----GQKMAPPQISAEVLKKMKKTA  125 (183)
T ss_dssp             TCGGGEEECGGGTTTCBSCSHHHHHHTTTCSSEEEECSSSBEEEEET----TEEECHHHHHHHHHHHHHHHH
T ss_pred             cCCccEEeeeHHHcCCCCCcHHHHhhhhcCCEEEEEcCCCcEEEEEC----CEEECHHHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999988 7888877663    567999999999999998753

>d2ja9a2 d.51.1.1 (A:152-236) Ribosomal RNA-processing protein 40, RRP40 {Saccharomyces cerevisiae [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Eukaryotic type KH-domain (KH-domain type I)
superfamily: Eukaryotic type KH-domain (KH-domain type I)
family: Eukaryotic type KH-domain (KH-domain type I)
domain: Ribosomal RNA-processing protein 40, RRP40
species: Saccharomyces cerevisiae [TaxId: 4932]

Probab=89.48  E-value=0.16  Score=27.66  Aligned_cols=37  Identities=19%  Similarity=0.049  Sum_probs=28.9

Q ss_pred             HhhHHhhCCCCCCHHHHhhcccCCeEEee-CCCcceEEE
Q psy15349          8 FDAKRLIGRKFDDATVQADMKHWPFTVVS-DGGKPKIQV   45 (80)
Q Consensus         8 ~~~KRliGr~~~d~~vq~~~~~~pf~i~~-~~g~~~~~v   45 (80)
                      ..+.||+|+.-. +-++...+..||+|.- .||.+|+.-
T Consensus        10 ~~~rrll~~~~~-~ml~~l~~~~~~eI~VG~NGrIWi~~   47 (85)
T d2ja9a2          10 NFARQLLFNNDF-PLLKVLAAHTKFEVAIGLNGKIWVKC   47 (85)
T ss_dssp             HHHHHHHHCTTC-CHHHHHHTTCCCEEEEETTTEEEEEC
T ss_pred             HHHHHHHcCCCC-hHHHHHHhhcCceEEEecCcEEEEEC
Confidence            457899997633 4577778889999877 999999764