Psyllid ID: psy15397

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
MAVNKGFSTYMMSRQQTFPTRRNSVFVSNVEPDSADSNEFLSTSLRSGVVVSAVDFGSGVTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRTAETCDQTENQYMILRRGSLDDYSQILCEASYVLLEYARTASFMWMFIEGFYLNNMVTGCFFS
Secondary Structure (PSIPRED)
cccccHHHHHHHcccccHHHHHHEEEEccccccccccccHHHHHHHHHHHHHHHHHccEEEEEEcccEEEEEEEEEEccccHHHHHHHHHHHHcccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHccccccHHHHHHHHHHHcccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHcHHHHHHHHHHHHHHHHHHHHHccHHHHHEEEEEEccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccEEEEEEEccccHcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcHHHHHHccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
MAVNKGFSTYMMSrqqtfptrrnsvfvsnvepdsadsnefLSTSLRSGVVvsavdfgsgvtvfqdkSYYCIYKVVGWGIPLIMTGLWALVTAYYMREercwwgynLTSFFWilegprlaaVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLlgitnvinmteapieHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRTAETCDQTENQYMILRrgslddysQILCEASYVLLEYARTASFMWMFIEGFYlnnmvtgcffs
Flexible Loop (DISEMBL)
mavnkgfstymmsrqqtfptrrnsVFVSNVEPDSADSNEFLSTSLRSGVVVSAVDFGsgvtvfqdkSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRtaetcdqtenQYMILRRGSLDDYSQILCEASYVLLEYARTASFMWMFIEGFYLNNMVTGCFFS
Low Complexity Region (SEG)
MAVNKGFSTYMMSRQQTFPTRRNSVFVSNVEPDSADSNEFLSTSLRSGVVVSAVDFGSGVTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRTAETCDQTENQYMILRRGSLDDYSQILCEASYVLLEYARTASFMWMFIEGFYLNNMVTGCFFS
Disordered region (IsUnstruct)
******************************************TSLRSGVVVSAVDFGSGVTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRTAETCDQTENQYMILRRGSLDDYSQILCEASYVLLEYARTASFMWMFIEGFYLNNMVTGCFF*
Disordered Region (DISOPRED)
****KGFSTYMMSRQQTFPTRRNSVFVSNVEPDSADSNEFLSTSLRSGVVVSAVDFGSGVTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLV***************KGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRTAET**************************************FMWMFIEGFYLNNMVTGCFFS
Disordered Region (DISEMBL)
MAVNKGFSTYMMSRQQTFPTRRNSVFVSNVEPDSADSNEFLSTSLRSGVVVSAVDFGSGVTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRTAETCDQTENQYMILRRGSLDDYSQILCEASYVLLEYARTASFMWMFIEGFYLNNMVTGCFFS
Disordered Region (DISPRO)
**VNKGFSTYMMSRQQTFPTRRNSVFVSNVEPDSADSNEFLSTSLRSGVVVSAVDFGSGVTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRTAETCDQTEN*****************CE*SYVLLEYARTASFMWMFIEGFYLNNMVTGCFFS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAVNKGFSTYMMSRQQTFPTRRNSVFVSNVEPDSADSNEFLSTSLRSGVVVSAVDFGSGVTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRTAETCDQTENQYMILRRGSLDDYSQILCEASYVLLEYARTASFMWMFIEGFYLNNMVTGCFFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	289	2.2.26 [Sep-21-2011]
Q9W4Y2	669	PDF receptor OS=Drosophil	yes	N/A	0.553	0.239	0.559	9e-46
Q09460	546	Calcitonin receptor-like	yes	N/A	0.608	0.322	0.387	8e-29
Q13324	411	Corticotropin-releasing f	no	N/A	0.487	0.343	0.441	2e-25
P30988	490	Calcitonin receptor OS=Ho	no	N/A	0.543	0.320	0.407	3e-25
P35347	415	Corticotropin-releasing f	yes	N/A	0.484	0.337	0.437	1e-24
O62772	415	Corticotropin-releasing f	N/A	N/A	0.484	0.337	0.437	1e-24
Q76LL8	415	Corticotropin-releasing f	no	N/A	0.484	0.337	0.437	1e-24
Q68EK2	470	Calcitonin gene-related p	yes	N/A	0.515	0.317	0.409	1e-24
P34998	444	Corticotropin-releasing f	no	N/A	0.484	0.315	0.437	2e-24
O08893	478	Calcitonin receptor OS=Ca	yes	N/A	0.539	0.326	0.397	3e-24

>sp|Q9W4Y2|PDFR_DROME PDF receptor OS=Drosophila melanogaster GN=Pdfr PE=1 SV=2

 Score =  184 bits (466), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 94/168 (55%), Positives = 119/168 (70%), Gaps = 8/168 (4%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREE--RCWWGYNLTSFFWILEGPR 117
           V VFQ       +  +GW +P++MT +WA  T  YM      C W YNLT ++WILEGPR
Sbjct: 352 VAVFQGSFPLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYNLTPYYWILEGPR 411

Query: 118 LAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPI 177
           LA + LNF FL+NIIRVLV+KLRQS  +++EQ RK VRAAIVL+PLLGITN+++   AP+
Sbjct: 412 LAVILLNFCFLVNIIRVLVMKLRQSQASDIEQTRKAVRAAIVLLPLLGITNLLHQL-APL 470

Query: 178 EHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV----LLSTATQF 221
           + +   F +WSY THFLTSFQGFF+A++YCF NGEV    L S ATQ 
Sbjct: 471 KTAT-NFAVWSYGTHFLTSFQGFFIALIYCFLNGEVRAVLLKSLATQL 517

Receptor for PDF, a neuropeptide controlling circadian behavioral rhythms. Probably regulates circadian behavioral rhythms through coordination of activities of clock neurons. PDF-binding results in the elevation of cAMP synthesis.
Drosophila melanogaster (taxid: 7227)

>sp|Q09460|PDFR1_CAEEL Calcitonin receptor-like protein 1 OS=Caenorhabditis elegans GN=pdfr-1 PE=2 SV=2

 Score =  127 bits (320), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 10/186 (5%)

Query: 63  FQDKSYYCIYKVVGWGIPLIMTGLWALVT--AYYMREERCWWGYNLTSFFWILEGPRLAA 120
           F  +     Y + G+GIPL+ T LW LV       + ERC   Y L   FWIL+GPR+A 
Sbjct: 283 FNSEPKLLPYFIAGYGIPLVHTMLWLLVVLIKKDFKVERCLGSYYLEPEFWILDGPRMAE 342

Query: 121 VSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTE-APIEH 179
           + +N  F+ N+IRVL  K+R+S+ T    L+K V+AA++L+PLLG+ N++     AP   
Sbjct: 343 LVINLFFICNVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRD 402

Query: 180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARRTAETCDQTENQYM 239
           ++  F +W+YT  F   +QG  VA +YCF N EV     T +   R       +++N+  
Sbjct: 403 NIMVFAVWTYTASFTYMYQGLMVASIYCFTNKEVNHVLKTFYARYR----LLHKSQNE-- 456

Query: 240 ILRRGS 245
            LRRGS
Sbjct: 457 -LRRGS 461

Not known. Putative receptor.

Caenorhabditis elegans (taxid: 6239)

>sp|Q13324|CRFR2_HUMAN Corticotropin-releasing factor receptor 2 OS=Homo sapiens GN=CRHR2 PE=1 SV=2

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/145 (44%), Positives = 92/145 (63%), Gaps = 4/145 (2%)

Query: 70  CIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRLAAVSLNFLFL 128
           C++  +GW IP  +   WA+   YY   E+CW+G        +I +GP +  + +NF+FL
Sbjct: 225 CLFLFIGWCIPFPIIVAWAIGKLYY-ENEQCWFGKEPGDLVDYIYQGPIILVLLINFVFL 283

Query: 129 LNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWS 188
            NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E  + + +++ 
Sbjct: 284 FNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGEDDLSQ-IMFI 341

Query: 189 YTTHFLTSFQGFFVAVLYCFFNGEV 213
           Y   FL SFQGFFV+V YCFFNGEV
Sbjct: 342 YFNSFLQSFQGFFVSVFYCFFNGEV 366

This is a receptor for corticotropin releasing factor. Shows high-affinity CRF binding. Also binds to urocortin I, II and III. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Homo sapiens (taxid: 9606)

>sp|P30988|CALCR_HUMAN Calcitonin receptor OS=Homo sapiens GN=CALCR PE=1 SV=1

 Score =  115 bits (289), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 5/162 (3%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
           V VF +K     Y ++GWG PL+ T + A+  A Y  +  CW     T   +I+ GP +A
Sbjct: 266 VAVFTEKQRLRWYYLLGWGFPLVPTTIHAITRAVYFNDN-CWLSVE-THLLYIIHGPVMA 323

Query: 120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
           A+ +NF FLLNI+RVLV K+R++H  E     K V+A ++LVPLLGI  V+     P   
Sbjct: 324 ALVVNFFFLLNIVRVLVTKMRETHEAESHMYLKAVKATMILVPLLGIQFVV-FPWRPSNK 382

Query: 180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQF 221
            + +  ++ Y  H L  FQGFFVA +YCF N EV  +   Q+
Sbjct: 383 MLGK--IYDYVMHSLIHFQGFFVATIYCFCNNEVQTTVKRQW 422

This is a receptor for calcitonin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. The calcitonin receptor is thought to couple to the heterotrimeric guanosine triphosphate-binding protein that is sensitive to cholera toxin.

Homo sapiens (taxid: 9606)

>sp|P35347|CRFR1_MOUSE Corticotropin-releasing factor receptor 1 OS=Mus musculus GN=Crhr1 PE=2 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 91/144 (63%), Gaps = 4/144 (2%)

Query: 71  IYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRLAAVSLNFLFLL 129
           ++  +GWG+P  +   WA+   YY   E+CW+G     +  +I +GP +  + +NF+FL 
Sbjct: 230 MFVCIGWGVPFPIIVAWAIGKLYY-DNEKCWFGKRPGVYTDYIYQGPMILVLLINFIFLF 288

Query: 130 NIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSY 189
           NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E  V R +++ Y
Sbjct: 289 NIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGEDEVSR-VVFIY 346

Query: 190 TTHFLTSFQGFFVAVLYCFFNGEV 213
              FL SFQGFFV+V YCF N EV
Sbjct: 347 FNSFLESFQGFFVSVFYCFLNSEV 370

Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Mus musculus (taxid: 10090)

>sp|O62772|CRFR1_SHEEP Corticotropin-releasing factor receptor 1 OS=Ovis aries GN=CRHR1 PE=2 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 91/144 (63%), Gaps = 4/144 (2%)

Query: 71  IYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRLAAVSLNFLFLL 129
           ++  +GWG+P  +   WA+   YY   E+CW+G     +  +I +GP +  + +NF+FL 
Sbjct: 230 MFICIGWGVPFPIIVAWAIGKLYY-DNEKCWFGKRPGVYTDYIYQGPMILVLLINFIFLF 288

Query: 130 NIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSY 189
           NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E  V R +++ Y
Sbjct: 289 NIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGEDEVSR-VVFIY 346

Query: 190 TTHFLTSFQGFFVAVLYCFFNGEV 213
              FL SFQGFFV+V YCF N EV
Sbjct: 347 FNSFLESFQGFFVSVFYCFLNSEV 370

Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Ovis aries (taxid: 9940)

>sp|Q76LL8|CRFR1_MACMU Corticotropin-releasing factor receptor 1 OS=Macaca mulatta GN=CRHR1 PE=2 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 91/144 (63%), Gaps = 4/144 (2%)

Query: 71  IYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRLAAVSLNFLFLL 129
           ++  +GWG+P  +   WA+   YY   E+CW+G     +  +I +GP +  + +NF+FL 
Sbjct: 230 MFICIGWGVPFPIIVAWAIGKLYY-DNEKCWFGKRPGVYTDYIYQGPMILVLLINFIFLF 288

Query: 130 NIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSY 189
           NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E  V R +++ Y
Sbjct: 289 NIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGEDEVSR-VVFIY 346

Query: 190 TTHFLTSFQGFFVAVLYCFFNGEV 213
              FL SFQGFFV+V YCF N EV
Sbjct: 347 FNSFLESFQGFFVSVFYCFLNSEV 370

Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Macaca mulatta (taxid: 9544)

>sp|Q68EK2|CALRL_DANRE Calcitonin gene-related peptide type 1 receptor OS=Danio rerio GN=calcrla PE=2 SV=1

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 5/154 (3%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
           V VF +K +   Y ++GWG PLI   + A+  +YY  +  CW   N TS  +I+ GP  A
Sbjct: 251 VAVFAEKQHLMWYYLLGWGFPLIPATIHAVARSYYYNDN-CWISSN-TSLLYIIHGPICA 308

Query: 120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
           A+ +N  FLLNI+RVL+ KL+ +H  +     K VRA ++LVPLLGI  V+   +     
Sbjct: 309 AMLVNLFFLLNIVRVLITKLKVTHQAKSSLYMKAVRATLILVPLLGIQYVLLPYKPSGRV 368

Query: 180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV 213
           S     ++ Y  H L  +QG  VA ++CFFNGEV
Sbjct: 369 SA---EIYDYIMHILMHYQGLLVATIFCFFNGEV 399

Receptor for calcitonin-gene-related peptide (CGRP) (By similarity). Receptor specificity may be modulated by accessory proteins. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Danio rerio (taxid: 7955)

>sp|P34998|CRFR1_HUMAN Corticotropin-releasing factor receptor 1 OS=Homo sapiens GN=CRHR1 PE=1 SV=1

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 91/144 (63%), Gaps = 4/144 (2%)

Query: 71  IYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRLAAVSLNFLFLL 129
           ++  +GWG+P  +   WA+   YY   E+CW+G     +  +I +GP +  + +NF+FL 
Sbjct: 259 MFICIGWGVPFPIIVAWAIGKLYY-DNEKCWFGKRPGVYTDYIYQGPMILVLLINFIFLF 317

Query: 130 NIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSY 189
           NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E  V R +++ Y
Sbjct: 318 NIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGEDEVSR-VVFIY 375

Query: 190 TTHFLTSFQGFFVAVLYCFFNGEV 213
              FL SFQGFFV+V YCF N EV
Sbjct: 376 FNSFLESFQGFFVSVFYCFLNSEV 399

Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Homo sapiens (taxid: 9606)

>sp|O08893|CALCR_CAVPO Calcitonin receptor OS=Cavia porcellus GN=CALCR PE=2 SV=1

 Score =  112 bits (280), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 93/161 (57%), Gaps = 5/161 (3%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
           V+VF +  +   Y ++GWG PL+ T + A+  A Y  +  CW   + T   +I+ GP + 
Sbjct: 250 VSVFNEAKHLRWYYLLGWGFPLVPTTIHAITRALYFNDN-CWISVD-THLLYIIHGPVMV 307

Query: 120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
           A+ +NF FLLNI+RVLV K+R++H  E     K V+A ++LVPLLGI  V+     P   
Sbjct: 308 ALVVNFFFLLNIVRVLVTKMRETHEAESYMYLKAVKATMILVPLLGIQFVV-FPWRPSNK 366

Query: 180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQ 220
            + +  ++ Y  H L  FQGFFVA +YCF N EV  +   Q
Sbjct: 367 VLGK--IYDYFMHSLIHFQGFFVATIYCFCNNEVQTTLKRQ 405

This is a receptor for calcitonin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. The calcitonin receptor is thought to couple to the heterotrimeric guanosine triphosphate-binding protein that is sensitive to cholera toxin.

Cavia porcellus (taxid: 10141)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
345493474	460	PREDICTED: PDF receptor-like [Nasonia vi	0.543	0.341	0.694	2e-61
347970317	562	AGAP003654-PA [Anopheles gambiae str. PE	0.532	0.274	0.681	3e-61
170047078	528	calcitonin receptor [Culex quinquefascia	0.532	0.291	0.668	1e-59
157120533	428	calcitonin receptor [Aedes aegypti]	0.543	0.366	0.662	1e-59
403183005	415	AAEL009024-PA, partial [Aedes aegypti]	0.543	0.378	0.662	5e-59
242007036	448	class B secretin-like G-protein coupled	0.532	0.343	0.677	2e-57
380017193	462	PREDICTED: PDF receptor-like [Apis flore	0.539	0.337	0.658	4e-50
328778767	462	PREDICTED: PDF receptor [Apis mellifera]	0.539	0.337	0.658	9e-50
340729658	460	PREDICTED: PDF receptor-like [Bombus ter	0.539	0.339	0.658	9e-50
350411331	460	PREDICTED: PDF receptor-like [Bombus imp	0.539	0.339	0.658	1e-49

>gi|345493474|ref|XP_003427082.1| PREDICTED: PDF receptor-like [Nasonia vitripennis]

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 109/157 (69%), Positives = 133/157 (84%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
           VTVFQ+ S+Y  Y++VGWG P+ MT  WA+VTA+Y    +CWWGYNLT +FWILEGPR+A
Sbjct: 235 VTVFQESSHYRTYRLVGWGYPIAMTLTWAIVTAFYYHPSKCWWGYNLTLYFWILEGPRMA 294

Query: 120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
            + +NFLFLLNIIRVLVVKLRQSHT+E+EQ RK VRAA+VL+PLLGITN+I+M +AP++ 
Sbjct: 295 VILVNFLFLLNIIRVLVVKLRQSHTSEIEQARKAVRAALVLLPLLGITNLISMAKAPLDK 354

Query: 180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLS 216
           S+W F LWSYTTHFLTSFQG F+A LYCF NGEV L+
Sbjct: 355 SIWEFALWSYTTHFLTSFQGLFIATLYCFLNGEVRLA 391

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970317|ref|XP_313426.5| AGAP003654-PA [Anopheles gambiae str. PEST] gi|333468876|gb|EAA08966.6| AGAP003654-PA [Anopheles gambiae str. PEST]

 Score =  241 bits (614), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 105/154 (68%), Positives = 136/154 (88%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
           VTVFQ +  + +Y +VGWG PLI+T +WA++TA Y+R+++CWWGYNLT ++WILEGPRLA
Sbjct: 279 VTVFQGRFPHKLYAIVGWGGPLILTVIWAIITAQYIRQQKCWWGYNLTPYYWILEGPRLA 338

Query: 120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
           AV LNF+FLLNIIRVL+VKLRQSHT+++EQ+RK VRAA+VLVPLLGITN++NMT+AP++ 
Sbjct: 339 AVVLNFIFLLNIIRVLIVKLRQSHTSDVEQVRKAVRAAVVLVPLLGITNILNMTQAPLDK 398

Query: 180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV 213
           +   F +WSY THFL+SFQGFF+A+LYCF NGEV
Sbjct: 399 TALEFAIWSYVTHFLSSFQGFFIALLYCFLNGEV 432

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170047078|ref|XP_001851064.1| calcitonin receptor [Culex quinquefasciatus] gi|167869627|gb|EDS33010.1| calcitonin receptor [Culex quinquefasciatus]

 Score =  236 bits (601), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 103/154 (66%), Positives = 131/154 (85%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
           VTVFQ +  + +Y  VGWG P+ +  +WA+ TA+Y+ +++CWWGYNLT ++WILEGPRLA
Sbjct: 216 VTVFQGRFPHALYAFVGWGGPVALAAIWAITTAHYIGQQKCWWGYNLTPYYWILEGPRLA 275

Query: 120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
            V LNF+FLLNIIRVL+VKLRQSHT+++EQ+RK VRAA+VLVPLLGITN++NMTEAP++ 
Sbjct: 276 VVLLNFIFLLNIIRVLIVKLRQSHTSDVEQVRKAVRAAVVLVPLLGITNILNMTEAPLDR 335

Query: 180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV 213
           +   F LWSY THFLTSFQGFF+A+LYCF NGEV
Sbjct: 336 TALEFALWSYVTHFLTSFQGFFIALLYCFLNGEV 369

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157120533|ref|XP_001653651.1| calcitonin receptor [Aedes aegypti]

 Score =  236 bits (601), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 104/157 (66%), Positives = 134/157 (85%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
           VTVFQ +  + +Y +VGWG P+ +T +WA+ TA Y+ +++CWWGYNLT ++WILEGPRLA
Sbjct: 227 VTVFQGRFPHTLYAMVGWGGPVALTAIWAVTTAQYVGQQKCWWGYNLTPYYWILEGPRLA 286

Query: 120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
            V LNF+FLLNIIRVL+VKLRQSHT+++EQ+RK VRAA+VLVPLLGITN++NMTEAP++ 
Sbjct: 287 VVLLNFIFLLNIIRVLIVKLRQSHTSDVEQVRKAVRAAVVLVPLLGITNLLNMTEAPLDR 346

Query: 180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLS 216
           +   F LWSY THFLTSFQGFF+A+LYCF NGEV ++
Sbjct: 347 TALEFALWSYVTHFLTSFQGFFIALLYCFLNGEVRIA 383

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|403183005|gb|EAT39151.2| AAEL009024-PA, partial [Aedes aegypti]

 Score =  233 bits (595), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 104/157 (66%), Positives = 134/157 (85%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
           VTVFQ +  + +Y +VGWG P+ +T +WA+ TA Y+ +++CWWGYNLT ++WILEGPRLA
Sbjct: 214 VTVFQGRFPHTLYAMVGWGGPVALTAIWAVTTAQYVGQQKCWWGYNLTPYYWILEGPRLA 273

Query: 120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
            V LNF+FLLNIIRVL+VKLRQSHT+++EQ+RK VRAA+VLVPLLGITN++NMTEAP++ 
Sbjct: 274 VVLLNFIFLLNIIRVLIVKLRQSHTSDVEQVRKAVRAAVVLVPLLGITNLLNMTEAPLDR 333

Query: 180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLS 216
           +   F LWSY THFLTSFQGFF+A+LYCF NGEV ++
Sbjct: 334 TALEFALWSYVTHFLTSFQGFFIALLYCFLNGEVRIA 370

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242007036|ref|XP_002424348.1| class B secretin-like G-protein coupled receptor GPRcal2, putative [Pediculus humanus corporis] gi|212507748|gb|EEB11610.1| class B secretin-like G-protein coupled receptor GPRcal2, putative [Pediculus humanus corporis]

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 105/155 (67%), Positives = 127/155 (81%), Gaps = 1/155 (0%)

Query: 60  VTVF-QDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRL 118
           VTVF +++SYY +Y ++GWG P+I+T  W LV   Y +  +CWWGYNLT +FWILEGPRL
Sbjct: 233 VTVFHKEQSYYTMYSIIGWGSPIIITSAWILVMITYYKTSKCWWGYNLTIYFWILEGPRL 292

Query: 119 AAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIE 178
             V LNFLFLLNIIRVLVVKLRQS  +E+EQ+RK VRA  VL+PLLGITN+I+M+++P+E
Sbjct: 293 TVVVLNFLFLLNIIRVLVVKLRQSRKSEIEQVRKAVRATAVLLPLLGITNIISMSKSPLE 352

Query: 179 HSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV 213
            SVW F LWSY THFLTSFQGFF+A LYCF NGEV
Sbjct: 353 KSVWEFALWSYGTHFLTSFQGFFIAFLYCFLNGEV 387

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017193|ref|XP_003692545.1| PREDICTED: PDF receptor-like [Apis florea]

 Score =  204 bits (518), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 106/161 (65%), Positives = 133/161 (82%), Gaps = 5/161 (3%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREE----RCWWGYNLTSFFWILEG 115
           VTVFQ+ SYY +Y+ +GWG P++MT +WA++TA+Y   +    RCW GYNL+S+FWILEG
Sbjct: 234 VTVFQENSYYRMYRFIGWGCPVMMTLIWAIITAFYYHPKSKFSRCWSGYNLSSYFWILEG 293

Query: 116 PRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEA 175
           PR A + LNFLFLLNI+RVLVVKLRQSHT+E+EQ+ K VRAA+VL+PLLGITNV+ M EA
Sbjct: 294 PRFAVILLNFLFLLNIVRVLVVKLRQSHTSEIEQVLKAVRAAVVLLPLLGITNVLFMIEA 353

Query: 176 PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLS 216
           P+ H+V +F LWSY+THFL SFQG F+A LYCF NGEV L+
Sbjct: 354 PL-HNVRKFALWSYSTHFLQSFQGLFIATLYCFLNGEVRLA 393

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778767|ref|XP_395896.4| PREDICTED: PDF receptor [Apis mellifera]

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 106/161 (65%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREE----RCWWGYNLTSFFWILEG 115
           VTVFQ+ SYY +Y+ +GWG P++MT +WA +TA+Y   +    RCW GYNL+S+FWILEG
Sbjct: 234 VTVFQENSYYRMYRFIGWGCPVMMTLIWATITAFYYHPKSKFSRCWSGYNLSSYFWILEG 293

Query: 116 PRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEA 175
           PR A + LNFLFLLNI+RVLVVKLRQSHT+E+EQ+ K VRAA+VL+PLLGITNV+ M EA
Sbjct: 294 PRFAVILLNFLFLLNIVRVLVVKLRQSHTSEIEQVLKAVRAAVVLLPLLGITNVLFMIEA 353

Query: 176 PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLS 216
           P+ H+V +F LWSY+THFL SFQG F+A LYCF NGEV L+
Sbjct: 354 PL-HNVRKFALWSYSTHFLQSFQGLFIATLYCFLNGEVRLA 393

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729658|ref|XP_003403114.1| PREDICTED: PDF receptor-like [Bombus terrestris]

 Score =  203 bits (516), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 106/161 (65%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREE----RCWWGYNLTSFFWILEG 115
           VTVFQ+ SYY +Y+ +GWG P+IMT +WA++TA+Y   +    RCW GYNL+S+FWILEG
Sbjct: 235 VTVFQENSYYRMYRFIGWGCPVIMTLVWAIITAFYYHPKSKFTRCWSGYNLSSYFWILEG 294

Query: 116 PRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEA 175
           PR A + LNFLFLLNI+RVLVVKLRQSHT+E+EQ+ K VRAA+VL+PLLGITNV+ M E 
Sbjct: 295 PRFAVILLNFLFLLNIVRVLVVKLRQSHTSEIEQVLKAVRAAVVLLPLLGITNVLFMIEV 354

Query: 176 PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLS 216
           P+ H+V +F LWSY+THFL SFQG F+A LYCF NGEV L+
Sbjct: 355 PL-HNVKKFALWSYSTHFLQSFQGLFIATLYCFLNGEVRLA 394

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411331|ref|XP_003489313.1| PREDICTED: PDF receptor-like [Bombus impatiens]

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/161 (65%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREE----RCWWGYNLTSFFWILEG 115
           VTVFQ+ SYY +Y+ +GWG P+IMT +WA++TA+Y   +    RCW GYNL+S+FWILEG
Sbjct: 235 VTVFQENSYYRMYRFIGWGCPVIMTLVWAIITAFYYHPKSKFTRCWSGYNLSSYFWILEG 294

Query: 116 PRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEA 175
           PR A + LNFLFLLNI+RVLVVKLRQSHT+E+EQ+ K VRAA+VL+PLLGITNV+ M E 
Sbjct: 295 PRFAVILLNFLFLLNIVRVLVVKLRQSHTSEIEQVLKAVRAAVVLLPLLGITNVLFMIEV 354

Query: 176 PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLS 216
           P+ H+V +F LWSY+THFL SFQG F+A LYCF NGEV L+
Sbjct: 355 PL-HNVKKFALWSYSTHFLQSFQGLFIATLYCFLNGEVRLA 394

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
FB|FBgn0260753	669	Pdfr "Pigment-dispersing facto	0.608	0.263	0.524	9.1e-45
UNIPROTKB|Q13324	411	CRHR2 "Corticotropin-releasing	0.487	0.343	0.441	5e-28
WB|WBGene00015735	546	pdfr-1 [Caenorhabditis elegans	0.491	0.260	0.434	6.6e-28
UNIPROTKB|F8WA81	370	CRHR2 "Corticotropin-releasing	0.491	0.383	0.438	1e-27
UNIPROTKB|F1P5E1	469	CALCR "Uncharacterized protein	0.602	0.371	0.391	1.5e-27
UNIPROTKB|F1NH61	470	CALCR "Uncharacterized protein	0.602	0.370	0.391	1.5e-27
UNIPROTKB|A4D1G6	474	CALCR "Calcitonin receptor" [H	0.543	0.331	0.407	1.7e-27
UNIPROTKB|F1NGG4	412	CRHR2 "Uncharacterized protein	0.522	0.366	0.419	1.7e-27
UNIPROTKB|E2R9A7	415	CRHR1 "Uncharacterized protein	0.522	0.363	0.419	1.7e-27
UNIPROTKB|F1PZC5	415	CRHR1 "Uncharacterized protein	0.522	0.363	0.419	1.7e-27

FB|FBgn0260753 Pdfr "Pigment-dispersing factor receptor" [Drosophila melanogaster (taxid:7227)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 97/185 (52%), Positives = 125/185 (67%)

Query:    60 VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREE--RCWWGYNLTSFFWILEGPR 117
             V VFQ       +  +GW +P++MT +WA  T  YM      C W YNLT ++WILEGPR
Sbjct:   352 VAVFQGSFPLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYNLTPYYWILEGPR 411

Query:   118 LAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPI 177
             LA + LNF FL+NIIRVLV+KLRQS  +++EQ RK VRAAIVL+PLLGITN+++   AP+
Sbjct:   412 LAVILLNFCFLVNIIRVLVMKLRQSQASDIEQTRKAVRAAIVLLPLLGITNLLHQL-APL 470

Query:   178 EHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV----LLSTATQFDTARRTAETCDQ 233
             + +   F +WSY THFLTSFQGFF+A++YCF NGEV    L S ATQ  + R   E   +
Sbjct:   471 KTAT-NFAVWSYGTHFLTSFQGFFIALIYCFLNGEVRAVLLKSLATQL-SVRGHPEWAPK 528

Query:   234 TENQY 238
               + Y
Sbjct:   529 RASMY 533

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IC;ISS

GO:0016021 "integral to membrane" evidence=IEA;IC;ISS

GO:0004948 "calcitonin receptor activity" evidence=ISS

GO:0008188 "neuropeptide receptor activity" evidence=ISS;IPI

GO:0004930 "G-protein coupled receptor activity" evidence=ISS;IDA

GO:0042332 "gravitaxis" evidence=IDA;NAS

GO:0048512 "circadian behavior" evidence=IDA;IMP

GO:0007218 "neuropeptide signaling pathway" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IDA;IMP

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0042745 "circadian sleep/wake cycle" evidence=IMP

GO:0042749 "regulation of circadian sleep/wake cycle" evidence=IMP

GO:0045475 "locomotor rhythm" evidence=IMP

UNIPROTKB|Q13324 CRHR2 "Corticotropin-releasing factor receptor 2" [Homo sapiens (taxid:9606)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 64/145 (44%), Positives = 92/145 (63%)

Query:    70 CIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRLAAVSLNFLFL 128
             C++  +GW IP  +   WA+   YY   E+CW+G        +I +GP +  + +NF+FL
Sbjct:   225 CLFLFIGWCIPFPIIVAWAIGKLYY-ENEQCWFGKEPGDLVDYIYQGPIILVLLINFVFL 283

Query:   129 LNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWS 188
              NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E  + + +++ 
Sbjct:   284 FNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGEDDLSQ-IMFI 341

Query:   189 YTTHFLTSFQGFFVAVLYCFFNGEV 213
             Y   FL SFQGFFV+V YCFFNGEV
Sbjct:   342 YFNSFLQSFQGFFVSVFYCFFNGEV 366

GO:0005179 "hormone activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0015056 "corticotrophin-releasing factor receptor activity" evidence=IEA

GO:0016525 "negative regulation of angiogenesis" evidence=IEA

GO:0043950 "positive regulation of cAMP-mediated signaling" evidence=IEA

GO:0043951 "negative regulation of cAMP-mediated signaling" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007188 "adenylate cyclase-modulating G-protein coupled receptor signaling pathway" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

WB|WBGene00015735 pdfr-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 317 (116.6 bits), Expect = 6.6e-28, P = 6.6e-28
 Identities = 63/145 (43%), Positives = 90/145 (62%)

Query:    72 YKVVGWGIPLIMTGLWALVTAYY--MREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLL 129
             Y + G+GIPL+ T LW LV       + ERC   Y L   FWIL+GPR+A + +N  F+ 
Sbjct:   292 YFIAGYGIPLVHTMLWLLVVLIKKDFKVERCLGSYYLEPEFWILDGPRMAELVINLFFIC 351

Query:   130 NIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTE-APIEHSVWRFLLWS 188
             N+IRVL  K+R+S+ T    L+K V+AA++L+PLLG+ N++     AP   ++  F +W+
Sbjct:   352 NVIRVLYSKVRESNNTSEAGLKKSVKAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAVWT 411

Query:   189 YTTHFLTSFQGFFVAVLYCFFNGEV 213
             YT  F   +QG  VA +YCF N EV
Sbjct:   412 YTASFTYMYQGLMVASIYCFTNKEV 436

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0040011 "locomotion" evidence=IMP

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=ISS

GO:0045762 "positive regulation of adenylate cyclase activity" evidence=ISS

GO:0006874 "cellular calcium ion homeostasis" evidence=ISS

GO:0004948 "calcitonin receptor activity" evidence=ISS

UNIPROTKB|F8WA81 CRHR2 "Corticotropin-releasing factor receptor 2" [Homo sapiens (taxid:9606)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 64/146 (43%), Positives = 92/146 (63%)

Query:    70 CIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRLAAVSLNFLFL 128
             C++  +GW IP  +   WA+   YY   E+CW+G        +I +GP +  + +NF+FL
Sbjct:   225 CLFLFIGWCIPFPIIVAWAIGKLYY-ENEQCWFGKEPGDLVDYIYQGPIILVLLINFVFL 283

Query:   129 LNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWS 188
              NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E  + + +++ 
Sbjct:   284 FNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGEDDLSQ-IMFI 341

Query:   189 YTTHFLTSFQGFFVAVLYCFFNGEVL 214
             Y   FL SFQGFFV+V YCFFNGE L
Sbjct:   342 YFNSFLQSFQGFFVSVFYCFFNGEGL 367

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|F1P5E1 CALCR "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 310 (114.2 bits), Expect = 1.5e-27, P = 1.5e-27
 Identities = 72/184 (39%), Positives = 98/184 (53%)

Query:    60 VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
             V VF ++     Y ++GWG PL+   + A+  A Y  +  CW   + T   +I+ GP +A
Sbjct:   249 VAVFAEEQRLHWYYLLGWGFPLVPASIHAVARAKYFNDN-CWMSVD-THLLYIVHGPVMA 306

Query:   120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
             A+ +NF FLLNI+RVLV KLR +H  E     K VRA ++LVPLLGI  VI +   P   
Sbjct:   307 ALLVNFFFLLNIVRVLVTKLRDTHRAESNMYMKAVRATLILVPLLGIQFVI-IPWRPENR 365

Query:   180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV---LLSTATQFDT--ARRTAETCDQT 234
                   ++ Y  H L  +QG  VA ++CFFNGEV   L    TQ+ T   +R  E C   
Sbjct:   366 LAGE--IYDYIMHILMHYQGLLVATIFCFFNGEVQGALKRQWTQYKTQWGQRRREHCSTR 423

Query:   235 ENQY 238
                Y
Sbjct:   424 STSY 427

GO:0004948 "calcitonin receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|F1NH61 CALCR "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 310 (114.2 bits), Expect = 1.5e-27, P = 1.5e-27
 Identities = 72/184 (39%), Positives = 98/184 (53%)

Query:    60 VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
             V VF ++     Y ++GWG PL+   + A+  A Y  +  CW   + T   +I+ GP +A
Sbjct:   250 VAVFAEEQRLHWYYLLGWGFPLVPASIHAVARAKYFNDN-CWMSVD-THLLYIVHGPVMA 307

Query:   120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
             A+ +NF FLLNI+RVLV KLR +H  E     K VRA ++LVPLLGI  VI +   P   
Sbjct:   308 ALLVNFFFLLNIVRVLVTKLRDTHRAESNMYMKAVRATLILVPLLGIQFVI-IPWRPENR 366

Query:   180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV---LLSTATQFDT--ARRTAETCDQT 234
                   ++ Y  H L  +QG  VA ++CFFNGEV   L    TQ+ T   +R  E C   
Sbjct:   367 LAGE--IYDYIMHILMHYQGLLVATIFCFFNGEVQGALKRQWTQYKTQWGQRRREHCSTR 424

Query:   235 ENQY 238
                Y
Sbjct:   425 STSY 428

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0001669 "acrosomal vesicle" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IEA

GO:0030279 "negative regulation of ossification" evidence=IEA

GO:0030316 "osteoclast differentiation" evidence=IEA

GO:0043488 "regulation of mRNA stability" evidence=IEA

UNIPROTKB|A4D1G6 CALCR "Calcitonin receptor" [Homo sapiens (taxid:9606)]

 Score = 310 (114.2 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 66/162 (40%), Positives = 93/162 (57%)

Query:    60 VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
             V VF +K     Y ++GWG PL+ T + A+  A Y  +  CW     T   +I+ GP +A
Sbjct:   250 VAVFTEKQRLRWYYLLGWGFPLVPTTIHAITRAVYFNDN-CWLSVE-THLLYIIHGPVMA 307

Query:   120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEH 179
             A+ +NF FLLNI+RVLV K+R++H  E     K V+A ++LVPLLGI  V+     P   
Sbjct:   308 ALVVNFFFLLNIVRVLVTKMRETHEAESHMYLKAVKATMILVPLLGIQFVV-FPWRPSNK 366

Query:   180 SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQF 221
              + +  ++ Y  H L  FQGFFVA +YCF N EV  +   Q+
Sbjct:   367 MLGK--IYDYVMHSLIHFQGFFVATIYCFCNNEVQTTVKRQW 406

GO:0004948 "calcitonin receptor activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|F1NGG4 CRHR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 65/155 (41%), Positives = 95/155 (61%)

Query:    60 VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRL 118
             +T   DK    ++  +GW IP  +   WA+   YY   E+CW+G     +  +I +GP +
Sbjct:   216 MTYSTDKLRKWVFLFIGWCIPCPIIVAWAIGKLYY-ENEQCWFGKEPGKYIDYIYQGPVI 274

Query:   119 AAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIE 178
               + +NF+FL NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E
Sbjct:   275 LVLLINFVFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGE 333

Query:   179 HSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV 213
               + + +++ Y   FL SFQGFFV+V YCF NGEV
Sbjct:   334 DDISQ-IVFIYFNSFLQSFQGFFVSVFYCFLNGEV 367

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005179 "hormone activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0015056 "corticotrophin-releasing factor receptor activity" evidence=IEA

GO:0016525 "negative regulation of angiogenesis" evidence=IEA

GO:0043950 "positive regulation of cAMP-mediated signaling" evidence=IEA

GO:0043951 "negative regulation of cAMP-mediated signaling" evidence=IEA

UNIPROTKB|E2R9A7 CRHR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 65/155 (41%), Positives = 95/155 (61%)

Query:    60 VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRL 118
             +T   D+    ++  +GWG+P  +   WA+   YY   E+CW+G     +  +I +GP +
Sbjct:   219 LTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYY-DNEKCWFGKRPGVYTDYIYQGPMI 277

Query:   119 AAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIE 178
               + +NF+FL NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E
Sbjct:   278 LVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGE 336

Query:   179 HSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV 213
               V R +++ Y   FL SFQGFFV+V YCF N EV
Sbjct:   337 DEVSR-VIFIYFNSFLESFQGFFVSVFYCFLNSEV 370

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

UNIPROTKB|F1PZC5 CRHR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 65/155 (41%), Positives = 95/155 (61%)

Query:    60 VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFF-WILEGPRL 118
             +T   D+    ++  +GWG+P  +   WA+   YY   E+CW+G     +  +I +GP +
Sbjct:   219 LTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYY-DNEKCWFGKRPGVYTDYIYQGPMI 277

Query:   119 AAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIE 178
               + +NF+FL NI+R+L+ KLR S T+E  Q RK V+A +VL+PLLGIT ++     P E
Sbjct:   278 LVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVN-PGE 336

Query:   179 HSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEV 213
               V R +++ Y   FL SFQGFFV+V YCF N EV
Sbjct:   337 DEVSR-VIFIYFNSFLESFQGFFVSVFYCFLNSEV 370

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9W4Y2	PDFR_DROME	No assigned EC number	0.5595	0.5536	0.2391	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	289
pfam00002	239	pfam00002, 7tm_2, 7 transmembrane receptor (Secret	9e-29
pfam00002	239	pfam00002, 7tm_2, 7 transmembrane receptor (Secret	1e-04

>gnl|CDD|215647 pfam00002, 7tm_2, 7 transmembrane receptor (Secretin family)

 Score =  109 bits (275), Expect = 9e-29
 Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 9/145 (6%)

Query: 60  VTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA 119
              F ++ Y   Y ++GWG+P ++ G+WA+V   Y     CW   N   F+WI +GP L 
Sbjct: 102 EVFFSERKYLWWYLLIGWGVPAVVVGIWAIVRKGYGNP-GCWLSNN-GGFWWIFKGPVLL 159

Query: 120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKG-VRAAIVLVPLLGITNVINMTEAPIE 178
            + +NF+F +NI+R+LV KLR     E +Q RK   ++ +VL+PLLGIT ++    AP +
Sbjct: 160 VILVNFIFFINILRILVQKLRSPDMGETDQYRKRLAKSTLVLLPLLGITWIL-FLFAPED 218

Query: 179 H-SVWRFLLWSYTTHFLTSFQGFFV 202
             S+    L+      L SFQGFFV
Sbjct: 219 DVSIVFLYLF----AILNSFQGFFV 239

This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs).They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognised. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97 ; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteristic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling. Length = 239

>gnl|CDD|215647 pfam00002, 7tm_2, 7 transmembrane receptor (Secretin family)

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 250 SQILCEASYVLLEYARTASFMWMFIEGFYLNNMVTGCFFS 289
           S ++C+   V L Y   A+F WM +EG YL  ++   FFS
Sbjct: 67  SDVVCKVVAVFLHYFFLANFFWMLVEGLYLYTLLVEVFFS 106

This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs).They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognised. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97 ; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteristic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling. Length = 239

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	289
KOG4564|consensus	473		100.0
KOG4193|consensus	610		100.0
PF00002	242	7tm_2: 7 transmembrane receptor (Secretin family);	99.95
KOG4289|consensus	2531		99.89
KOG4564|consensus	473		99.16
PF05462	303	Dicty_CAR: Slime mold cyclic AMP receptor	99.15
PF02101	405	Ocular_alb: Ocular albinism type 1 protein; InterP	97.84
PF01534	328	Frizzled: Frizzled/Smoothened family membrane regi	96.05
PF00002	242	7tm_2: 7 transmembrane receptor (Secretin family);	95.32
KOG4193|consensus	610		94.61
PF10320	257	7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemorecep	91.98
KOG4289|consensus	2531		90.92
PF11710	201	Git3: G protein-coupled glucose receptor regulatin	89.59
PF10328	274	7TM_GPCR_Srx: Serpentine type 7TM GPCR chemorecept	85.34
PF10323	283	7TM_GPCR_Srv: Serpentine type 7TM GPCR chemorecept	80.07

>KOG4564|consensus

Probab=100.00  E-value=1.7e-43  Score=337.23  Aligned_cols=210  Identities=36%  Similarity=0.639  Sum_probs=184.1

Q ss_pred             hhhhhhhhhHHHHHHhhccccCCC---------------CCchHH-----------HHHHHHHHHHHHHH--HheeeeEe
Q psy15397         12 MSRQQTFPTRRNSVFVSNVEPDSA---------------DSNEFL-----------STSLRSGVVVSAVD--FGSGVTVF   63 (289)
Q Consensus        12 ~~~~~s~~l~~~~~f~~~~~~~~~---------------~~~~v~-----------~~~~~~~~~le~~~--~~l~V~vf   63 (289)
                      |+++.||+|||+++|++|..+..+               .++.++           .++=+.||++||.+  ..+++.+|
T Consensus       184 ~nLF~SfiLra~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ck~~~~~~~Yf~~aNf~WmlvEGlYLhtLlv~~~~  263 (473)
T KOG4564|consen  184 MNLFASFILRAASVLIKDLVLVVNGEQDASSDTSLHCLISSNPVGCKLLFVFFQYFVLANFFWMLVEGLYLHTLLVVAFF  263 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeec
Confidence            689999999999999999966322               122222           33446888889984  46788999


Q ss_pred             cCCceeEEEeeeccccceeeeeeeeehhcccccccceeccccccceeeeeehhHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy15397         64 QDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSH  143 (289)
Q Consensus        64 ~~~~~~~~y~l~gWG~P~liV~i~~~~~~~y~~~~~CWl~~~~~~~~~~f~~Pv~~illiN~v~fi~i~~~l~~k~~~~~  143 (289)
                      ++++++++|.++|||+|+++|++|+.++..++|.+ ||..+++.+.+|++.||+++.+++|+++|++|+|++++|+|+++
T Consensus       264 ser~~~~~y~~iGWG~P~v~v~~Wai~r~~~~d~~-CW~~~~~~~~~WIi~gPi~~ai~vNf~flinIvrILv~KLr~~~  342 (473)
T KOG4564|consen  264 SERRYFWLYLLIGWGVPAVFVVVWAIVRLYLEDTG-CWDSNDTGHIWWIIRGPILLAILVNFIFLINIVRILVTKLRASN  342 (473)
T ss_pred             cCccHHHHHHHHhhCCcHHHhhhHHhHheeecccc-ccccCCCcceEEEEeccHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            99999999999999999999999999997666665 99999866899999999999999999999999999999999999


Q ss_pred             cchhhHhhhhhhhhhhccccccceeeeccccccccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhh
Q psy15397        144 TTELEQLRKGVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDT  223 (289)
Q Consensus       144 ~~~~~~~~~~~r~~l~L~~llG~tW~~g~~~~~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~  223 (289)
                      ..+.++++|.+|+++.|+||+|++.+...+ .|.++  ....++.|....++|+|||||+++||++|+|||.|+||+|++
T Consensus       343 ~~~~~~y~K~vKaTLvLIPLfGI~~ilf~~-~P~~~--~~~~v~~~~~~~L~SfQGf~VAvlYCFlN~EVq~elrr~W~r  419 (473)
T KOG4564|consen  343 ASETDQYRKLVKATLVLIPLFGIHYILFAF-RPDED--TLREVYLYFELFLGSFQGFFVAVLYCFLNGEVQAELRRKWSR  419 (473)
T ss_pred             ccchHHHHHHHHHHHHHHHHcCCeeEEEEe-cCchH--HHHHHHHHHHHHHHhccchheehheeecCHHHHHHHHHHHHh
Confidence            999999999999999999999999999988 45543  234788999999999999999999999999999999999987


Q ss_pred             cc
Q psy15397        224 AR  225 (289)
Q Consensus       224 ~r  225 (289)
                      .+
T Consensus       420 ~~  421 (473)
T KOG4564|consen  420 WR  421 (473)
T ss_pred             cC
Confidence            54

>KOG4193|consensus

Probab=100.00  E-value=1.3e-37  Score=307.72  Aligned_cols=198  Identities=19%  Similarity=0.345  Sum_probs=159.5

Q ss_pred             HHHHhhcccc---CCCCCchH--H----------HHHHHHHHHHHHHHHh-eeeeEecC--CceeEEEeeeccccceeee
Q psy15397         23 NSVFVSNVEP---DSADSNEF--L----------STSLRSGVVVSAVDFG-SGVTVFQD--KSYYCIYKVVGWGIPLIMT   84 (289)
Q Consensus        23 ~~~f~~~~~~---~~~~~~~v--~----------~~~~~~~~~le~~~~~-l~V~vf~~--~~~~~~y~l~gWG~P~liV   84 (289)
                      .++|+++.+|   +..++..+  |          .+|.|.||.+||+|+| +++++|..  +++...|+++|||.|+++|
T Consensus       363 ~~L~l~~l~fL~~~~~~~~~~~~C~~~a~llhff~LaaF~Wm~leg~hl~~~~v~vf~~~~~~~~l~~~~~gwg~Pavvv  442 (610)
T KOG4193|consen  363 LCLFLAELLFLLGIDRTSTSVVLCIAAAILLHFFFLAAFFWMLLEGFHLYLLLVEVFRSRPRRRKLLYSLYGWGVPAVVV  442 (610)
T ss_pred             HHHHHHHHHHhcccccccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHhhhhHHHH
Confidence            5788888866   22222222  2          4577888889999987 57788854  3445666689999999999


Q ss_pred             eeeeehhccc----ccccceeccccccceeeeeehhHHHHHHHHHHHHHHHHHHHHHHhcccCc-chhhHhhhhhhhhhh
Q psy15397         85 GLWALVTAYY----MREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHT-TELEQLRKGVRAAIV  159 (289)
Q Consensus        85 ~i~~~~~~~y----~~~~~CWl~~~~~~~~~~f~~Pv~~illiN~v~fi~i~~~l~~k~~~~~~-~~~~~~~~~~r~~l~  159 (289)
                      +++++++++.    +.+++||+..+ ..++|.|+||+++++++|+++|+.+++++.+++...+. .++.+..+..|.++.
T Consensus       443 ~Isa~~~~~~~~~~~~~~~CWl~~~-~~~~~~F~GPv~~ii~~Ni~~Fv~t~~~l~~~~~~~~~~~~~~~~~~~~~~~l~  521 (610)
T KOG4193|consen  443 GVSALVDPDLEGQYGTPRVCWLDTQ-NGFIWSFLGPVTLIILVNIVMFVVTLKKLLRRLSKLQPIASKLENISLIRSALA  521 (610)
T ss_pred             hheeEEeccCccccccCCceEEecC-CceEEEEehHHHHHHHHHHHHHHHHHHHHhhcccccCcchhhHHHHHHHHHHHH
Confidence            9999999854    44578999998 68999999999999999999999999999887655443 233333378899999


Q ss_pred             ccccccceeeeccccccccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397        160 LVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR  225 (289)
Q Consensus       160 L~~llG~tW~~g~~~~~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r  225 (289)
                      |+++||+||+||++++..+    ...++.|+|+|+|++||+|||++||++++++|++++|+.+..+
T Consensus       522 L~~lLGlTW~fgi~s~~~~----~~~v~~YlFti~NalQG~fIFi~~cll~~kvr~~~~k~~~~~~  583 (610)
T KOG4193|consen  522 LLFLLGLTWIFGIFSWLPG----TSVVFAYLFTIFNALQGVFIFIFHCLLRKKVRKEYRKWLCCGR  583 (610)
T ss_pred             HHHHHHHHHHHHHHHHhcc----cchHHHHHHHHHHHhhhhHhhHhhhhhhHHHHHHHHHHhcccC
Confidence            9999999999999975322    2478999999999999999999999999999999999987544

>PF00002 7tm_2: 7 transmembrane receptor (Secretin family); InterPro: IPR000832 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=99.95  E-value=3.5e-29  Score=223.04  Aligned_cols=157  Identities=30%  Similarity=0.541  Sum_probs=0.0

Q ss_pred             HHHHHHHHHHHHHHHhe-eeeEec-CCceeEEEeeeccccceeeeeeeeehhcccccccceeccccccceeeeeehhHHH
Q psy15397         42 STSLRSGVVVSAVDFGS-GVTVFQ-DKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNLTSFFWILEGPRLA  119 (289)
Q Consensus        42 ~~~~~~~~~le~~~~~l-~V~vf~-~~~~~~~y~l~gWG~P~liV~i~~~~~~~y~~~~~CWl~~~~~~~~~~f~~Pv~~  119 (289)
                      .++.|.||.+||+|+|. +++++. +++++++|+++|||+|+++++++++.+.++|+++.||++++ .+..|+|.+|+++
T Consensus        83 ~la~f~Wm~~~~~~l~~~~~~~~~~~~~~~~~~~~~gwg~P~~iv~i~~~~~~~~y~~~~CWl~~~-~~~~~~f~~P~~~  161 (242)
T PF00002_consen   83 FLASFFWMLVEAFYLYRLLVKVFNSSRRRFWWYYLIGWGIPALIVVISVAVNSDGYGNDNCWLSND-WGFIWAFVGPVLI  161 (242)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHhheeEEEeecccchhhheeeeeeecCcceeeeeeeeecccccccccccccCC-CceEEEEEecccc
Confidence            45678899999998775 445554 46788999999999999999999999965555566999996 6899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcchhhHhhh-hhhhhhhccccccceeeeccccccccchhhHHHHHHHHHHHHhhhh
Q psy15397        120 AVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRK-GVRAAIVLVPLLGITNVINMTEAPIEHSVWRFLLWSYTTHFLTSFQ  198 (289)
Q Consensus       120 illiN~v~fi~i~~~l~~k~~~~~~~~~~~~~~-~~r~~l~L~~llG~tW~~g~~~~~~~~~~~~~~v~~ylf~ilnslQ  198 (289)
                      ++++|+++++.+++++.++.++++++++++.++ ..|+.+.|+|++|++|++++++. .++  ....+++|+|+++||+|
T Consensus       162 ~l~in~vi~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~llg~~w~~~~~~~-~~~--~~~~~~~~lf~i~nslQ  238 (242)
T PF00002_consen  162 ILLINIVIFILVLRVLVRKSRSSDKSEKKKRRKKILRASLILLPLLGITWLFGILAV-SDS--VDSLVFQYLFAILNSLQ  238 (242)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eecccchhheeeEEeehhhhhhhhhhhccchhhhHHHHHHHHHHHHHHHheeeeeee-ccc--chHHHHHHHHHHHHcCc
Confidence            999999999999999988877666666666664 89999999999999999999964 322  12478999999999999


Q ss_pred             hhhh
Q psy15397        199 GFFV  202 (289)
Q Consensus       199 G~fI  202 (289)
                      |++|
T Consensus       239 G~~I  242 (242)
T PF00002_consen  239 GFFI  242 (242)
T ss_dssp             ----
T ss_pred             ceeC
Confidence            9986

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The secretin-like GPCRs include secretin [], calcitonin [], parathyroid hormone/parathyroid hormone-related peptides [] and vasoactive intestinal peptide [], all of which activate adenylyl cyclase and the phosphatidyl-inositol-calcium pathway. These receptors contain seven transmembrane regions, in a manner reminiscent of the rhodopsins and other receptors believed to interact with G-proteins (however there is no significant sequence identity between these families, the secretin-like receptors thus bear their own unique '7TM' signature). Their N terminus is probably located on the extracellular side of the membrane and potentially glycosylated. This N-terminal region contains a long conserved region which allow the binding of large peptidic ligand such as glucagon, secretin, VIP and PACAP; this region contains five conserved cysteines residues which could be involved in disulphide bond. The C-terminal region of these receptor is probably cytoplasmic. Every receptor gene in this family is encoded on multiple exons, and several of these genes are alternatively spliced to yield functionally distinct products. ; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 3L2J_A 1BL1_A.

>KOG4289|consensus

Probab=99.89  E-value=9.1e-24  Score=215.08  Aligned_cols=182  Identities=21%  Similarity=0.292  Sum_probs=148.7

Q ss_pred             HHHHhhccccCCCCC-c-hHH----------HHHHHHHHHHHHHHHheeeeEecCCceeEEEeeeccccceeeeeeeeeh
Q psy15397         23 NSVFVSNVEPDSADS-N-EFL----------STSLRSGVVVSAVDFGSGVTVFQDKSYYCIYKVVGWGIPLIMTGLWALV   90 (289)
Q Consensus        23 ~~~f~~~~~~~~~~~-~-~v~----------~~~~~~~~~le~~~~~l~V~vf~~~~~~~~y~l~gWG~P~liV~i~~~~   90 (289)
                      .+++++++.|-.... + -.|          ..+-|.|.++||.|+|.+..--.+...|+.|+++|||+|++|.+.++++
T Consensus      2206 ~Al~l~~L~Fv~gi~~nq~~CtvvailLhf~~~stFaWlfl~gLhlYRml~e~v~tg~mrfy~~vGwgvPa~itglavgl 2285 (2531)
T KOG4289|consen 2206 AALGLAQLVFVLGINQNQFYCTVVAILLHFTYLSTFAWLFLEGLHLYRMLTENVDTGPMRFYYLVGWGVPALITGLAVGL 2285 (2531)
T ss_pred             HHHhHHHHHhhhhcccCchhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccCCCCceeEEEEeecchhhheeeeeecc
Confidence            588999998843221 2 122          3455889999999999766665677899999999999999999999988


Q ss_pred             hcccccccceeccccccceeeeeehhHHHHHHHHHHHHHHHHHHHHHHhcccCcchhhHhhhhhhhhhhccccccceeee
Q psy15397         91 TAYYMREERCWWGYNLTSFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHTTELEQLRKGVRAAIVLVPLLGITNVI  170 (289)
Q Consensus        91 ~~~y~~~~~CWl~~~~~~~~~~f~~Pv~~illiN~v~fi~i~~~l~~k~~~~~~~~~~~~~~~~r~~l~L~~llG~tW~~  170 (289)
                      +      ++||++.. ..++|.|.||+++++++|+..++...|.-++|+.+.-.  ++..-+.++..+.++.++|.||.+
T Consensus      2286 d------DfCwlS~h-~~LiWsfagPigl~i~ms~~~~~lsa~vSc~~k~~~f~--kK~~v~~lq~~fl~llllsatwl~ 2356 (2531)
T KOG4289|consen 2286 D------DFCWLSPH-DTLIWSFAGPIGLVILMSFYAAALSARVSCHKKYQVFV--KKGNVSVLQHSFLLLLLLSATWLL 2356 (2531)
T ss_pred             c------ceeecccc-hheeeeecccceeeehHHHHHHHHHHHHhhhhhheeee--eccchhhhHHHHHHHHHHHHHHHH
Confidence            7      57999986 78999999999999999999999999887776543322  222334778888999999999999


Q ss_pred             ccccccccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHH
Q psy15397        171 NMTEAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTA  218 (289)
Q Consensus       171 g~~~~~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~  218 (289)
                      ++++.  +.+   .+.|.|+|+.++.+||.||+++||++|.|||+++|
T Consensus      2357 ~ll~v--n~~---~l~fhyl~a~~~~lqg~~Vlll~cVl~~~~raa~~ 2399 (2531)
T KOG4289|consen 2357 GLLAV--NPD---PLEFHYLFASIIGLQGPFVLLLWCVLNIEVRAALK 2399 (2531)
T ss_pred             HHHhc--CCc---hHHHHHHHHHHHHhhhHHHHHHHhhhcHHHHHhhc
Confidence            99963  333   36789999999999999999999999999999998

>KOG4564|consensus

Probab=99.16  E-value=2.1e-11  Score=117.43  Aligned_cols=41  Identities=34%  Similarity=0.833  Sum_probs=38.8

Q ss_pred             ccccchhhHHHHHHHHHHhHHHHHHHHHHHhhhhceecccC
Q psy15397        249 YSQILCEASYVLLEYARTASFMWMFIEGFYLNNMVTGCFFS  289 (289)
Q Consensus       249 ~~~~~Ck~~~~~~~y~~~~n~~W~l~eg~yL~~ll~~~~~~  289 (289)
                      .++++||++.+++|||++|||+|||+||+|||+|++.++++
T Consensus       224 ~~~~~Ck~~~~~~~Yf~~aNf~WmlvEGlYLhtLlv~~~~s  264 (473)
T KOG4564|consen  224 SNPVGCKLLFVFFQYFVLANFFWMLVEGLYLHTLLVVAFFS  264 (473)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeecc
Confidence            46889999999999999999999999999999999999875

>PF05462 Dicty_CAR: Slime mold cyclic AMP receptor

Probab=99.15  E-value=1.7e-11  Score=113.25  Aligned_cols=171  Identities=16%  Similarity=0.208  Sum_probs=101.9

Q ss_pred             HHHHHHHHHHHhe-eeeEecC-CceeEEEeeeccccceeeeeeeeehhccccc-ccceeccccccc-eeeeeehhHHHHH
Q psy15397         46 RSGVVVSAVDFGS-GVTVFQD-KSYYCIYKVVGWGIPLIMTGLWALVTAYYMR-EERCWWGYNLTS-FFWILEGPRLAAV  121 (289)
Q Consensus        46 ~~~~~le~~~~~l-~V~vf~~-~~~~~~y~l~gWG~P~liV~i~~~~~~~y~~-~~~CWl~~~~~~-~~~~f~~Pv~~il  121 (289)
                      +-|-+.=+++.|+ +++..++ ++..++|.+++||+|+++..+....+ .|+. ++.||++++.+. .+..|.+|+.+++
T Consensus        90 ~lWt~~iA~nly~~~~~~~~~~~k~e~~Y~l~~wGiPli~a~i~l~~~-~~g~~G~WCWI~~~~~~~r~~lfY~Pl~ii~  168 (303)
T PF05462_consen   90 FLWTLCIAFNLYLTFVKRYDELEKLEKYYHLVCWGIPLIPAVIPLIGN-DYGPAGNWCWIKPEWDVWRFALFYIPLWIII  168 (303)
T ss_pred             HHHHHHHHHHhhheeEEcCccHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCCCCCceeecCCCcchHHHHHHHHHHHHH
Confidence            3344444445565 3444433 34558899999999999877655433 3332 357999986333 2346899998888


Q ss_pred             HHHHHHHHHHHHHHHHHhcccCcchhh-Hhhhhhhhhhhccccccceeeecccc---ccccchhhHHHHHHHHHHHHhhh
Q psy15397        122 SLNFLFLLNIIRVLVVKLRQSHTTELE-QLRKGVRAAIVLVPLLGITNVINMTE---APIEHSVWRFLLWSYTTHFLTSF  197 (289)
Q Consensus       122 liN~v~fi~i~~~l~~k~~~~~~~~~~-~~~~~~r~~l~L~~llG~tW~~g~~~---~~~~~~~~~~~v~~ylf~ilnsl  197 (289)
                      .++.++...+.+...+..+....++++ +.+...|... =..++=+.|+++.+-   ...++.   .....++-+.+..+
T Consensus       169 ~~~~ilv~i~~~~~y~~~~~~~sd~~~~~~~~~~kL~~-Yp~ifiicw~fa~INRI~~~~~~~---~~~l~~Lh~~~s~l  244 (303)
T PF05462_consen  169 IISAILVGITMRYIYRVIRNGVSDNKDKHLKYQLKLVN-YPLIFIICWIFATINRIYNFIGKN---PFWLSVLHVGFSPL  244 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCC---chHHHHHHHHHHHH
Confidence            888776665555443333322222221 2222333222 112234578888762   112221   23567888899999


Q ss_pred             hhhhhhheeeeechHHHHHHHHhh
Q psy15397        198 QGFFVAVLYCFFNGEVLLSTATQF  221 (289)
Q Consensus       198 QG~fIfll~c~~n~~Vr~~~~~~~  221 (289)
                      ||++-++.|.+.|+-.++.+..+.
T Consensus       245 qGf~nsivy~~n~~~~~~~~~~~~  268 (303)
T PF05462_consen  245 QGFFNSIVYGYNNSLMWRYLGSKI  268 (303)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHH
Confidence            999999999977776666666555

>PF02101 Ocular_alb: Ocular albinism type 1 protein; InterPro: IPR001414 Ocular albinism type 1 (OA1) is an X-linked disorder characterised by severe impairment of visual acuity, retinal hypopigmentation and the presence of macromelanosomes

Probab=97.84  E-value=9.1e-06  Score=76.19  Aligned_cols=159  Identities=19%  Similarity=0.240  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHheeeeEecCCceeEEEeeeccccceeeeeeeeehhcccccccceeccccc-cceeeeeehhHHHHHHHHH
Q psy15397         47 SGVVVSAVDFGSGVTVFQDKSYYCIYKVVGWGIPLIMTGLWALVTAYYMREERCWWGYNL-TSFFWILEGPRLAAVSLNF  125 (289)
Q Consensus        47 ~~~~le~~~~~l~V~vf~~~~~~~~y~l~gWG~P~liV~i~~~~~~~y~~~~~CWl~~~~-~~~~~~f~~Pv~~illiN~  125 (289)
                      -|.+.=++..|++++-...+..++.|..++||.|++.++.-..+-+ +-+.+.|=-..++ -+-+..-++|++++++.|=
T Consensus       132 wWtfcYAVDv~Lv~~~~ag~~~~~lYH~~aWgl~~lL~~~Gl~~Ly-~Ps~~~Ce~~l~~alphYvttY~PlllVlvaNP  210 (405)
T PF02101_consen  132 WWTFCYAVDVYLVIRRSAGRSTIWLYHMMAWGLPALLCAEGLAMLY-YPSISRCESGLEHALPHYVTTYIPLLLVLVANP  210 (405)
T ss_pred             HHHHHHHHHHhheeeccCCCcchhHHHHHHHHHHHHHHHhccceee-cCCHHhhhhhhhhcchhHHHHHHHHHHHHHhcc
Confidence            3333334455677766666777899999999999998876554332 1222335211110 1344567899999999999


Q ss_pred             HHHHHHHHHHHHHhcccCc--chhh-Hhhhhhhh-hhhccccccceeeecccc--------c--cccch-----hhHHHH
Q psy15397        126 LFLLNIIRVLVVKLRQSHT--TELE-QLRKGVRA-AIVLVPLLGITNVINMTE--------A--PIEHS-----VWRFLL  186 (289)
Q Consensus       126 v~fi~i~~~l~~k~~~~~~--~~~~-~~~~~~r~-~l~L~~llG~tW~~g~~~--------~--~~~~~-----~~~~~v  186 (289)
                      ++|..+.+.+-+.++.+..  .+++ +.-+.+|. .+....++=+.|+-.++-        .  ..+++     ......
T Consensus       211 iLy~~a~~~V~~~lk~r~g~yT~~ER~l~~~IK~kFf~I~lVF~iCWlpNIINg~LL~~l~~~~~i~~~sl~~~~~a~~t  290 (405)
T PF02101_consen  211 ILYIKAVRAVASLLKGRQGIYTENERRLGAQIKIKFFKIMLVFYICWLPNIINGSLLFYLEMQPDINGGSLKQVRNAALT  290 (405)
T ss_pred             HHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHhHHHHHHhhcccccccccccchhhHHHH
Confidence            9999999887665555543  2222 11122222 233444555677665541        0  11110     012357


Q ss_pred             HHHHHHHHhhhhhhhhhhee
Q psy15397        187 WSYTTHFLTSFQGFFVAVLY  206 (289)
Q Consensus       187 ~~ylf~ilnslQG~fIfll~  206 (289)
                      ..|+-.|+|.+|||+-.+.|
T Consensus       291 ~W~IMaIlNPlQgfLnsLay  310 (405)
T PF02101_consen  291 TWFIMAILNPLQGFLNSLAY  310 (405)
T ss_pred             HHHHHHHHhHHHHHHHHHhh
Confidence            78999999999999998887

A novel transcript from the OA1 critical region is expressed in high levels in RNA samples from retina and from melanoma and encodes a potential integral membrane protein []. This protein is of unknown function but is known to bind heterotrimeric G proteins.; GO: 0016020 membrane

>PF01534 Frizzled: Frizzled/Smoothened family membrane region; InterPro: IPR000539 The frizzled (fz) locus of Drosophila coordinates the cytoskeletons of epidermal cells, producing a parallel array of cuticular hairs and bristles [, ]

Probab=96.05  E-value=0.0032  Score=59.05  Aligned_cols=72  Identities=19%  Similarity=0.267  Sum_probs=55.3

Q ss_pred             CceeEEEeeeccccceeeeeeeeehhccccc--ccceeccccccc-eeeeeehhHHHHHHHHHHHHHHHHHHHHH
Q psy15397         66 KSYYCIYKVVGWGIPLIMTGLWALVTAYYMR--EERCWWGYNLTS-FFWILEGPRLAAVSLNFLFLLNIIRVLVV  137 (289)
Q Consensus        66 ~~~~~~y~l~gWG~P~liV~i~~~~~~~y~~--~~~CWl~~~~~~-~~~~f~~Pv~~illiN~v~fi~i~~~l~~  137 (289)
                      +++-..+.+++|++|++.+++..+.+.-.+|  ++.|++.++|.. ..+..++|.++.+++...+++.....+.+
T Consensus       133 ~~~s~yfH~~aW~iP~~~ti~vL~~~~VdgD~ltGiC~Vg~~~~~~l~~fvl~Pl~i~l~iG~~fL~~G~~~l~r  207 (328)
T PF01534_consen  133 EKKSSYFHLVAWGIPAVLTIAVLALRKVDGDELTGICFVGNQNPSALRGFVLAPLFIYLLIGTVFLLAGFVSLFR  207 (328)
T ss_pred             hhhcchhhhHHhhhhHHHHHHHHHhcccccccccceeEEeCCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3566778999999999988887777664333  367999987543 45667999999999999998887766554

In fz mutants, the orientation of individual hairs with respect both to their neighbours and to the organism as a whole is altered. In the wild-type wing, all hairs point towards the distal tip []. In the developing wing, fz has 2 functions: it is required for the proximal-distal transmission of an intracellular polarity signal; and it is required for cells to respond to the polarity signal. Fz produces an mRNA that encodes an integral membrane protein with 7 putative transmembrane (TM) domains. This protein should contain both extracellular and cytoplasmic domains, which could function in the transmission and interpretation of polarity information []. This signature is usually found downstream of the Fz domain (IPR000024 from INTERPRO); GO: 0007166 cell surface receptor linked signaling pathway, 0016020 membrane

>PF00002 7tm_2: 7 transmembrane receptor (Secretin family); InterPro: IPR000832 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=95.32  E-value=0.0046  Score=54.73  Aligned_cols=34  Identities=44%  Similarity=0.871  Sum_probs=0.0

Q ss_pred             chhhHHHHHHHHHHhHHHHHHHHHHHhhhhceec
Q psy15397        253 LCEASYVLLEYARTASFMWMFIEGFYLNNMVTGC  286 (289)
Q Consensus       253 ~Ck~~~~~~~y~~~~n~~W~l~eg~yL~~ll~~~  286 (289)
                      .|+...++.||+.+++|+||++||+|||..++..
T Consensus        71 ~C~~~a~~~hy~~la~f~Wm~~~~~~l~~~~~~~  104 (242)
T PF00002_consen   71 LCRAIAILLHYFFLASFFWMLVEAFYLYRLLVKV  104 (242)
T ss_dssp             ----------------------------------
T ss_pred             cchhhhhHhHHHHHHHHHHHHHHHHHhheeEEEe
Confidence            3999999999999999999999999999998654

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The secretin-like GPCRs include secretin [], calcitonin [], parathyroid hormone/parathyroid hormone-related peptides [] and vasoactive intestinal peptide [], all of which activate adenylyl cyclase and the phosphatidyl-inositol-calcium pathway. These receptors contain seven transmembrane regions, in a manner reminiscent of the rhodopsins and other receptors believed to interact with G-proteins (however there is no significant sequence identity between these families, the secretin-like receptors thus bear their own unique '7TM' signature). Their N terminus is probably located on the extracellular side of the membrane and potentially glycosylated. This N-terminal region contains a long conserved region which allow the binding of large peptidic ligand such as glucagon, secretin, VIP and PACAP; this region contains five conserved cysteines residues which could be involved in disulphide bond. The C-terminal region of these receptor is probably cytoplasmic. Every receptor gene in this family is encoded on multiple exons, and several of these genes are alternatively spliced to yield functionally distinct products. ; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 3L2J_A 1BL1_A.

>KOG4193|consensus

Probab=94.61  E-value=0.029  Score=56.82  Aligned_cols=35  Identities=40%  Similarity=0.806  Sum_probs=32.5

Q ss_pred             chhhHHHHHHHHHHhHHHHHHHHHHHhhhhceecc
Q psy15397        253 LCEASYVLLEYARTASFMWMFIEGFYLNNMVTGCF  287 (289)
Q Consensus       253 ~Ck~~~~~~~y~~~~n~~W~l~eg~yL~~ll~~~~  287 (289)
                      .|++.-+++||+.++.|+||+.||.+|+.+++..+
T Consensus       385 ~C~~~a~llhff~LaaF~Wm~leg~hl~~~~v~vf  419 (610)
T KOG4193|consen  385 LCIAAAILLHFFFLAAFFWMLLEGFHLYLLLVEVF  419 (610)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999777654

>PF10320 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemoreceptor Srsx; InterPro: IPR019424 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=91.98  E-value=0.48  Score=42.65  Aligned_cols=71  Identities=13%  Similarity=0.031  Sum_probs=46.8

Q ss_pred             hhHhhhhhhhhhhccccccceeeecccc------ccccchhhHHHHHH--HHHHHHhhhhhhhhhheeeeechHHHHHHH
Q psy15397        147 LEQLRKGVRAAIVLVPLLGITNVINMTE------APIEHSVWRFLLWS--YTTHFLTSFQGFFVAVLYCFFNGEVLLSTA  218 (289)
Q Consensus       147 ~~~~~~~~r~~l~L~~llG~tW~~g~~~------~~~~~~~~~~~v~~--ylf~ilnslQG~fIfll~c~~n~~Vr~~~~  218 (289)
                      .++.+|..|+....+.+.-.+|.+....      ...+++ ....+..  -++..+|.-|=++|.   ..+|+|=|+++|
T Consensus       179 ~~~~~kv~ksL~v~v~i~i~~w~~s~~~~~v~~~~~~~~~-~~~~i~~~~~i~v~~~~s~~ffV~---~~~S~EYR~af~  254 (257)
T PF10320_consen  179 SSRSKKVFKSLKVTVIIFIFSWFLSQIINTVSLALGLDGE-TIAIIQMYAGIFVNISYSQNFFVY---YWRSSEYRKAFR  254 (257)
T ss_pred             chhHHHHHHHhhhheeeeeHHHHHHHHHHHHHHHhCCcHH-HHHHHHHHHHHHHHHHHHHHheEE---EEcCHHHHHHHH
Confidence            3455677788888888889999888752      112211 1112333  367777777766654   358999999999


Q ss_pred             Hhh
Q psy15397        219 TQF  221 (289)
Q Consensus       219 ~~~  221 (289)
                      +.|
T Consensus       255 ~~~  257 (257)
T PF10320_consen  255 ELF  257 (257)
T ss_pred             HhC
Confidence            875

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class sx (Srsx), which is a solo family amongst the superfamilies of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].

>KOG4289|consensus

Probab=90.92  E-value=0.23  Score=53.97  Aligned_cols=36  Identities=33%  Similarity=0.772  Sum_probs=33.8

Q ss_pred             cccchhhHHHHHHHHHHhHHHHHHHHHHHhhhhcee
Q psy15397        250 SQILCEASYVLLEYARTASFMWMFIEGFYLNNMVTG  285 (289)
Q Consensus       250 ~~~~Ck~~~~~~~y~~~~n~~W~l~eg~yL~~ll~~  285 (289)
                      .+..|-+..+++||..++.|.|+|+||+|||.+++-
T Consensus      2222 nq~~CtvvailLhf~~~stFaWlfl~gLhlYRml~e 2257 (2531)
T KOG4289|consen 2222 NQFYCTVVAILLHFTYLSTFAWLFLEGLHLYRMLTE 2257 (2531)
T ss_pred             CchhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence            578899999999999999999999999999999864

>PF11710 Git3: G protein-coupled glucose receptor regulating Gpa2; InterPro: IPR023041 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor

Probab=89.59  E-value=0.22  Score=43.43  Aligned_cols=67  Identities=18%  Similarity=0.261  Sum_probs=45.3

Q ss_pred             eeccccceeeeeeeeeh-h-cccccc-cceecccccc-ceeeeeehhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy15397         74 VVGWGIPLIMTGLWALV-T-AYYMRE-ERCWWGYNLT-SFFWILEGPRLAAVSLNFLFLLNIIRVLVVKLR  140 (289)
Q Consensus        74 l~gWG~P~liV~i~~~~-~-~~y~~~-~~CWl~~~~~-~~~~~f~~Pv~~illiN~v~fi~i~~~l~~k~~  140 (289)
                      .+.+++|++...+..+- + +.|++. ..||++.+.. .-++.-.+|.-++....+++++.+...+.++.|
T Consensus       129 ~~~~~~~~~~~~la~i~~~~~~Y~~~g~WCWi~~~~~~~Rl~l~y~~~~~~~~~~i~iY~~if~~lrr~~~  199 (201)
T PF11710_consen  129 VIWILVPLLLASLAFIGLGGPGYGPAGAWCWIPSRYEWYRLWLHYIWRFIIIFAIIIIYIAIFFYLRRRIR  199 (201)
T ss_pred             hHHHHHHHHHHHHHHhccccCcccccCcEEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            33457777776664433 2 234433 4699998732 245678899999999999999998776655443

Git3 is one of six proteins required for glucose-triggered adenylate cyclase activation, and is a G protein-coupled receptor responsible for the activation of adenylate cyclase through Gpa2 - heterotrimeric G protein alpha subunit, part of the glucose-detection pathway. Git3 contains seven predicted transmembrane domains, a third cytoplasmic loop and a cytoplasmic tail []. This is the conserved N-terminal domain of the member proteins.

>PF10328 7TM_GPCR_Srx: Serpentine type 7TM GPCR chemoreceptor Srx; InterPro: IPR019430 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=85.34  E-value=1.2  Score=40.17  Aligned_cols=65  Identities=14%  Similarity=0.296  Sum_probs=33.3

Q ss_pred             hhhhhhhhccccccceeeeccccccc-cchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHh
Q psy15397        152 KGVRAAIVLVPLLGITNVINMTEAPI-EHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQ  220 (289)
Q Consensus       152 ~~~r~~l~L~~llG~tW~~g~~~~~~-~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~  220 (289)
                      +.++.++..-.+.-+.++...+..+. ++....-....+.....+++.|+...    ..|+|+|+.++|.
T Consensus       207 ~f~~Qs~~Q~~~~~i~~~~~~~~~~~~~~~~~~F~~~t~~w~~~h~~DG~i~l----~fN~~~r~~~~~~  272 (274)
T PF10328_consen  207 RFFIQSFIQDLLYLIDLIFYFFIPPLSSNRWWQFFCTTFSWVLVHALDGLIML----IFNSEIRRKIRKK  272 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHhcceeEe----EEcHHHHHHHHhc
Confidence            33444444444444444444442221 22211112222334556888887654    4589999988865

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class x (Srx) from the Srg superfamily [, ]. Srg receptors contain seven hydrophobic, putative transmembrane, regions and can be distinguished from other 7TM GPCR receptors by their own characteristic TM signatures.

>PF10323 7TM_GPCR_Srv: Serpentine type 7TM GPCR chemoreceptor Srv; InterPro: IPR019426 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=80.07  E-value=4.1  Score=37.21  Aligned_cols=22  Identities=18%  Similarity=0.356  Sum_probs=17.4

Q ss_pred             eeEEEeeeccccceeeeeeeee
Q psy15397         68 YYCIYKVVGWGIPLIMTGLWAL   89 (289)
Q Consensus        68 ~~~~y~l~gWG~P~liV~i~~~   89 (289)
                      +.++-.++-|..|.++..+...
T Consensus       119 ~~~~i~~i~wi~p~li~~~~~~  140 (283)
T PF10323_consen  119 KIWIIILIQWIPPLLISLPFFF  140 (283)
T ss_pred             chhheeeeeehhhhhheeeeec
Confidence            4567788899999999888554

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class v (Srv) from the Srg superfamily [, ]. Srg receptors contain seven hydrophobic, putative transmembrane, regions and can be distinguished from other 7TM GPCR receptors by their own characteristic TM signatures.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	289
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	94.53
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	94.45
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	93.47
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	92.26
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	91.3
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	91.06
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	90.93
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	88.7
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	88.17
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	87.73
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	87.22
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	86.63
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	82.56
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	82.26

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*

Probab=94.53  E-value=0.013  Score=50.97  Aligned_cols=112  Identities=8%  Similarity=0.062  Sum_probs=53.7

Q ss_pred             eeeehhHHHHHHHHHHHHHHHHHHHHHHhcccCc-----chhhHhhhhhhhhhhccccccceeeeccccc---cccchhh
Q psy15397        111 WILEGPRLAAVSLNFLFLLNIIRVLVVKLRQSHT-----TELEQLRKGVRAAIVLVPLLGITNVINMTEA---PIEHSVW  182 (289)
Q Consensus       111 ~~f~~Pv~~illiN~v~fi~i~~~l~~k~~~~~~-----~~~~~~~~~~r~~l~L~~llG~tW~~g~~~~---~~~~~~~  182 (289)
                      ..+..|..+++..+..++...-+.. ++.++.+.     ...++.+|..|..+.++..+-+.|.-..+..   ..+++..
T Consensus       184 ~~~~ip~~ii~~~y~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~~~  262 (315)
T 4amj_A          184 ISFYIPLLIMIFVALRVYREAKEQI-RKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLV  262 (315)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHTC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence            3467888888776655444332111 11111111     1112345666666666666777776433310   0011100


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397        183 RFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR  225 (289)
Q Consensus       183 ~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r  225 (289)
                      . .....+...+..+....=.++|+ .|+|.|+++++.+++.+
T Consensus       263 ~-~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~  303 (315)
T 4amj_A          263 P-DWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPR  303 (315)
T ss_dssp             C-HHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC---
T ss_pred             h-HHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCC
Confidence            0 11223333344445555566778 89999999998876543

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A

Probab=94.45  E-value=0.012  Score=54.26  Aligned_cols=77  Identities=9%  Similarity=0.026  Sum_probs=45.6

Q ss_pred             hhhhhhhhhhccccccceeeeccccc---cc-cchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397        150 LRKGVRAAIVLVPLLGITNVINMTEA---PI-EHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR  225 (289)
Q Consensus       150 ~~~~~r~~l~L~~llG~tW~~g~~~~---~~-~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r  225 (289)
                      .+|..|..+.++.++-+.|+-..+..   .. ++.........++...+..+...+=.++|+++|++.|+++++.+++.+
T Consensus       349 ~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~  428 (447)
T 4eiy_A          349 EVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV  428 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHH
Confidence            34556666667777777776544310   00 000000122334445555566667778899999999999999887654


Q ss_pred             c
Q psy15397        226 R  226 (289)
Q Consensus       226 ~  226 (289)
                      +
T Consensus       429 ~  429 (447)
T 4eiy_A          429 L  429 (447)
T ss_dssp             -
T ss_pred             h
Confidence            3

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}

Probab=93.47  E-value=0.0038  Score=58.32  Aligned_cols=75  Identities=13%  Similarity=0.054  Sum_probs=42.4

Q ss_pred             hhhhhhhhhhccccccceeeeccccc----c-ccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhc
Q psy15397        150 LRKGVRAAIVLVPLLGITNVINMTEA----P-IEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTA  224 (289)
Q Consensus       150 ~~~~~r~~l~L~~llG~tW~~g~~~~----~-~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~  224 (289)
                      .+|..|..+.++..+-+.|+-..+..    . .+...  ......+...+..+....=.++|+++|++.|+++++.++++
T Consensus       396 ~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~--~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~  473 (481)
T 3pbl_A          396 EKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHV--SPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCG  473 (481)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC-
T ss_pred             hhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccC--cHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhcc
Confidence            45666666666667777776544310    0 01011  01122333344445555667789999999999999988655


Q ss_pred             cc
Q psy15397        225 RR  226 (289)
Q Consensus       225 r~  226 (289)
                      |+
T Consensus       474 ~~  475 (481)
T 3pbl_A          474 RP  475 (481)
T ss_dssp             --
T ss_pred             Cc
Confidence            43

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*

Probab=91.30  E-value=0.094  Score=49.80  Aligned_cols=75  Identities=9%  Similarity=0.112  Sum_probs=36.0

Q ss_pred             hhhhhhhhhhccccccceeeeccccc---cccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhccc
Q psy15397        150 LRKGVRAAIVLVPLLGITNVINMTEA---PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTARR  226 (289)
Q Consensus       150 ~~~~~r~~l~L~~llG~tW~~g~~~~---~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r~  226 (289)
                      .++..|..+.++.++-+.|+-..+..   ..++.... .....+...+..+...+=.++|+ +|++.|+++++.++++++
T Consensus       417 ~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~-~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~~  494 (514)
T 3sn6_R          417 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR-KEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRS  494 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSC-HHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-hHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCcc
Confidence            34556666665556666665433210   00110000 11122223333344444455677 799999999988765443

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*

Probab=91.06  E-value=0.13  Score=47.64  Aligned_cols=154  Identities=11%  Similarity=0.071  Sum_probs=72.1

Q ss_pred             eEEEeeeccccceeeeeeeeehhccc--c-cccceeccccccc----------eeeeeehhHHHHHHHHHHHHHHHHHHH
Q psy15397         69 YCIYKVVGWGIPLIMTGLWALVTAYY--M-REERCWWGYNLTS----------FFWILEGPRLAAVSLNFLFLLNIIRVL  135 (289)
Q Consensus        69 ~~~y~l~gWG~P~liV~i~~~~~~~y--~-~~~~CWl~~~~~~----------~~~~f~~Pv~~illiN~v~fi~i~~~l  135 (289)
                      .....++.|.+++++..........+  + ....|+.......          ....+.+|.++++..+..++..+-+.-
T Consensus       152 ~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~  231 (448)
T 2z73_A          152 AFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHE  231 (448)
T ss_dssp             HHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556667877776554333221111  1 1234876532111          112356777777776666555443221


Q ss_pred             HHH--hc-c-cCcc-h-----hhHhhhhhhhhhhccccccceeeeccccc---cccchhhHHHHHHHHHHHHhhhhhhhh
Q psy15397        136 VVK--LR-Q-SHTT-E-----LEQLRKGVRAAIVLVPLLGITNVINMTEA---PIEHSVWRFLLWSYTTHFLTSFQGFFV  202 (289)
Q Consensus       136 ~~k--~~-~-~~~~-~-----~~~~~~~~r~~l~L~~llG~tW~~g~~~~---~~~~~~~~~~v~~ylf~ilnslQG~fI  202 (289)
                      .+.  .. . ++++ +     .++.++..|..+.++..+-+.|+-..+..   ..+...........+...+..+...+=
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~N  311 (448)
T 2z73_A          232 KEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHN  311 (448)
T ss_dssp             HHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHGGGSH
T ss_pred             HHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcccCChHHHHHHHHHHHHHHhhc
Confidence            110  00 0 1110 1     11234556665555555556665332210   000000000112233334444455666


Q ss_pred             hheeeeechHHHHHHHHhhh
Q psy15397        203 AVLYCFFNGEVLLSTATQFD  222 (289)
Q Consensus       203 fll~c~~n~~Vr~~~~~~~~  222 (289)
                      .++|+++|++.|+++++.++
T Consensus       312 PiIY~~~~~~fR~~~~~~~~  331 (448)
T 2z73_A          312 PMIYSVSHPKFREAISQTFP  331 (448)
T ss_dssp             HHHHHHHCHHHHHHHHHHCG
T ss_pred             chHHHHhhHHHHHHHHHHHH
Confidence            77888999999999998764

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...

Probab=90.93  E-value=0.016  Score=51.34  Aligned_cols=75  Identities=12%  Similarity=0.100  Sum_probs=42.1

Q ss_pred             Hhhhhhhhhhhccccccceeeecccc----c-cccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhh
Q psy15397        149 QLRKGVRAAIVLVPLLGITNVINMTE----A-PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDT  223 (289)
Q Consensus       149 ~~~~~~r~~l~L~~llG~tW~~g~~~----~-~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~  223 (289)
                      +.++..|..+.++..+-+.|+-..+.    . ..+.+.  ......+...+..+....=-++|++.|+|.|+++++.+++
T Consensus       247 ~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~--~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c  324 (349)
T 1u19_A          247 AEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDF--GPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC  324 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCC--CHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCccc--chHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcc
Confidence            34455666655555566666543221    0 001111  0122344445555566666778889999999999988754


Q ss_pred             cc
Q psy15397        224 AR  225 (289)
Q Consensus       224 ~r  225 (289)
                      ++
T Consensus       325 ~~  326 (349)
T 1u19_A          325 GK  326 (349)
T ss_dssp             SC
T ss_pred             cC
Confidence            33

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A

Probab=88.70  E-value=0.043  Score=49.15  Aligned_cols=77  Identities=18%  Similarity=0.171  Sum_probs=41.7

Q ss_pred             hHhhhhhhhhhhccccccceeeeccccc------ccc-chhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHh
Q psy15397        148 EQLRKGVRAAIVLVPLLGITNVINMTEA------PIE-HSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQ  220 (289)
Q Consensus       148 ~~~~~~~r~~l~L~~llG~tW~~g~~~~------~~~-~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~  220 (289)
                      ++.+|..|..+.++..+-+.|+-..+..      +.. ..... .....+...+..+....=-++|++.|+|.|+++++.
T Consensus       241 ~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~  319 (364)
T 2ks9_A          241 SAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFI-QQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHA  319 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCC-HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            3445667777766667777775332210      000 00000 011122223333444555678889999999999998


Q ss_pred             hhhcc
Q psy15397        221 FDTAR  225 (289)
Q Consensus       221 ~~~~r  225 (289)
                      +++++
T Consensus       320 ~~~~~  324 (364)
T 2ks9_A          320 FRCCP  324 (364)
T ss_dssp             HSSSC
T ss_pred             HhhcC
Confidence            86644

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*

Probab=88.17  E-value=0.044  Score=50.72  Aligned_cols=74  Identities=9%  Similarity=-0.065  Sum_probs=44.6

Q ss_pred             hhhhhhhhhccccccceeeeccccc---cccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397        151 RKGVRAAIVLVPLLGITNVINMTEA---PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR  225 (289)
Q Consensus       151 ~~~~r~~l~L~~llG~tW~~g~~~~---~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r  225 (289)
                      +|.+|..+.++..+-+.|+-..+..   ...++.. ......+...+..+....=.++|+++|++.|+++++.+++++
T Consensus       384 ~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~-~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~  460 (467)
T 3uon_A          384 KKVTRTILAILLAFIITWAPYNVMVLINTFCAPCI-PNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHY  460 (467)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTS-CHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhccc-chHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhc
Confidence            4566676777777777776443310   0111100 122334555566677778889999999999999999875543

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*

Probab=87.73  E-value=0.02  Score=54.86  Aligned_cols=73  Identities=8%  Similarity=0.007  Sum_probs=38.2

Q ss_pred             hhhhhhhhhhccccccceeeecccc-----c-cccc-hhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhh
Q psy15397        150 LRKGVRAAIVLVPLLGITNVINMTE-----A-PIEH-SVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFD  222 (289)
Q Consensus       150 ~~~~~r~~l~L~~llG~tW~~g~~~-----~-~~~~-~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~  222 (289)
                      .+|.+|..+..+.++-+.|+=..+.     . ..+. ............+.+||.=   =-++|+++|++.|+++++.++
T Consensus       416 ~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~---NPiiY~~~~~~fr~~~~~~~~  492 (520)
T 3v2y_A          416 NVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGT---NPIIYTLTNKEMRRAFIRIMG  492 (520)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGGGT---HHHHHHHHCHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHH---HHHHHHHcCHHHHHHHHHHHH
Confidence            3445666666666666777532221     0 0000 0000011122344445443   345678899999999998876


Q ss_pred             hcc
Q psy15397        223 TAR  225 (289)
Q Consensus       223 ~~r  225 (289)
                      ++.
T Consensus       493 ~~~  495 (520)
T 3v2y_A          493 RPL  495 (520)
T ss_dssp             SCC
T ss_pred             Hhc
Confidence            543

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*

Probab=87.22  E-value=0.21  Score=45.94  Aligned_cols=72  Identities=14%  Similarity=0.018  Sum_probs=42.5

Q ss_pred             hhhhhhhhhccccccceeeeccccc------cccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhh
Q psy15397        151 RKGVRAAIVLVPLLGITNVINMTEA------PIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDT  223 (289)
Q Consensus       151 ~~~~r~~l~L~~llG~tW~~g~~~~------~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~  223 (289)
                      +|.+|..+.++.++-+.|+-..+..      ..+... .......+...+.-+....=.++|+++|+|.|+++|+-+++
T Consensus       379 ~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~-~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~  456 (464)
T 4dkl_A          379 RRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETT-FQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP  456 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccc-cchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhcc
Confidence            5667777777777888886544311      011111 11222233333444555666778999999999999986443

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}

Probab=86.63  E-value=0.023  Score=52.39  Aligned_cols=74  Identities=9%  Similarity=0.002  Sum_probs=42.8

Q ss_pred             hhhhhhhhhhccccccceeeecccc----ccccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhhcc
Q psy15397        150 LRKGVRAAIVLVPLLGITNVINMTE----APIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDTAR  225 (289)
Q Consensus       150 ~~~~~r~~l~L~~llG~tW~~g~~~----~~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~~r  225 (289)
                      .+|..|..+.++..+-+.|+-..+.    ...+....  ....++...+..+....=.++|+++|++.|+++++.+++++
T Consensus       368 ~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~~--~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~  445 (452)
T 3rze_A          368 ERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCN--EHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRS  445 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSC--TTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccccc--HHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhcc
Confidence            3566677777777777777643321    00000000  11223444455555666778899999999999998876543

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*

Probab=82.56  E-value=0.15  Score=47.69  Aligned_cols=76  Identities=16%  Similarity=0.209  Sum_probs=45.2

Q ss_pred             hhhhhhhhhhccccccceeeecccc----------cccc-ch-hhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHH
Q psy15397        150 LRKGVRAAIVLVPLLGITNVINMTE----------APIE-HS-VWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLST  217 (289)
Q Consensus       150 ~~~~~r~~l~L~~llG~tW~~g~~~----------~~~~-~~-~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~  217 (289)
                      .+|.+|..+.++..+-+.|+-..+.          ...+ .. ......+..+...+.-+....=.++|+++|+|.|+++
T Consensus       408 ~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~  487 (502)
T 3odu_A          408 KRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSA  487 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHH
Confidence            3566777777777777788743320          0000 00 0011122234444555556677789999999999999


Q ss_pred             HHhhhhcc
Q psy15397        218 ATQFDTAR  225 (289)
Q Consensus       218 ~~~~~~~r  225 (289)
                      ++.+++++
T Consensus       488 ~~ll~~~~  495 (502)
T 3odu_A          488 QHALTSGR  495 (502)
T ss_dssp             HHHHSSCS
T ss_pred             HHHhccCC
Confidence            99886654

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*

Probab=82.26  E-value=0.47  Score=43.79  Aligned_cols=74  Identities=11%  Similarity=0.082  Sum_probs=47.5

Q ss_pred             Hhhhhhhhhhhccccccceeeecccc------ccccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhh
Q psy15397        149 QLRKGVRAAIVLVPLLGITNVINMTE------APIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFD  222 (289)
Q Consensus       149 ~~~~~~r~~l~L~~llG~tW~~g~~~------~~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~  222 (289)
                      +.+|.+|..+.++.++-++|+=..+.      .+.....  .....++...+..+...+=.++|+++|++.|+++++.++
T Consensus       389 ~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~  466 (488)
T 3eml_A          389 KEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHA--PLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIR  466 (488)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccc--cHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHh
Confidence            34556677777777777777644331      0110011  123345555666677778888999999999999999887


Q ss_pred             hc
Q psy15397        223 TA  224 (289)
Q Consensus       223 ~~  224 (289)
                      ++
T Consensus       467 ~~  468 (488)
T 3eml_A          467 SH  468 (488)
T ss_dssp             HT
T ss_pred             hc
Confidence            64

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	289
d1u19a_	348	Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}	94.45

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.45  E-value=0.002  Score=55.35  Aligned_cols=77  Identities=13%  Similarity=0.118  Sum_probs=44.1

Q ss_pred             hHhhhhhhhhhhccccccceeeeccc----cccccchhhHHHHHHHHHHHHhhhhhhhhhheeeeechHHHHHHHHhhhh
Q psy15397        148 EQLRKGVRAAIVLVPLLGITNVINMT----EAPIEHSVWRFLLWSYTTHFLTSFQGFFVAVLYCFFNGEVLLSTATQFDT  223 (289)
Q Consensus       148 ~~~~~~~r~~l~L~~llG~tW~~g~~----~~~~~~~~~~~~v~~ylf~ilnslQG~fIfll~c~~n~~Vr~~~~~~~~~  223 (289)
                      ++.+|..|..+.++..+-+.|.-...    ....++... ...+..+...+..+...+=.++|+++|+|.|+++++.+++
T Consensus       245 ~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~-~~~~~~~~~~l~~~ns~iNPiIY~~~~~~fR~~~~~~l~c  323 (348)
T d1u19a_         245 KAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDF-GPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC  323 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCC-CHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred             HHHhhHhheEEEeehHHHHHhhHHHhhhheeeccCCccc-cHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCC
Confidence            44566777777777777787764221    111111100 1122233333333444555678889999999999998765


Q ss_pred             cc
Q psy15397        224 AR  225 (289)
Q Consensus       224 ~r  225 (289)
                      ++
T Consensus       324 ~~  325 (348)
T d1u19a_         324 GK  325 (348)
T ss_dssp             SC
T ss_pred             CC
Confidence            43