Psyllid ID: psy15417

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
Protein Sequence
MCDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEEEEcccccEEEEccccccEEEEEcccccEEcccccccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEEccccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEccccccEEEEc
Secondary Structure Prediction (SSPRO)
ccccHHHHcccEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEccccccccEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEcccccEEEEEEccccccEEEEEccccEEEEc
Coil and Loop (DISEMBL)
mcdhldksallgspaasghtgdvmslslapdmrtfvsgacdasaklwdirdgsckqtfpghesdinavtffpngwafatgsddatcRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLlagyddfncnvwdSMKTERAGilaghdnrvsclgvtedgmavaTGSWDSFLRIWN
Flexible Loop (DISEMBL)
MCDHLDKSallgspaasghTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGmavatgswdsflriwn
Low Complexity Region (SEG)
MCDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Disordered region (IsUnstruct)
***************************LAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW*
Disordered Region (DISOPRED)
MCDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Disordered Region (DISEMBL)
********ALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Disordered Region (DISPRO)
MCDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	176	2.2.26 [Sep-21-2011]
O45040	340	Guanine nucleotide-bindin	N/A	N/A	0.835	0.432	0.925	1e-85
Q5GIS3	341	Guanine nucleotide-bindin	N/A	N/A	0.857	0.442	0.884	8e-85
P26308	340	Guanine nucleotide-bindin	yes	N/A	0.829	0.429	0.918	4e-84
P17343	340	Guanine nucleotide-bindin	yes	N/A	0.846	0.438	0.901	8e-84
Q61ZF6	340	Guanine nucleotide-bindin	N/A	N/A	0.846	0.438	0.901	8e-84
P23232	341	Guanine nucleotide-bindin	N/A	N/A	0.829	0.428	0.905	2e-83
Q9HAV0	340	Guanine nucleotide-bindin	yes	N/A	0.835	0.432	0.868	3e-81
P54313	340	Guanine nucleotide-bindin	yes	N/A	0.835	0.432	0.868	4e-80
P62880	340	Guanine nucleotide-bindin	yes	N/A	0.835	0.432	0.868	4e-80
P62879	340	Guanine nucleotide-bindin	no	N/A	0.835	0.432	0.868	4e-80

>sp|O45040|GBB1_HOMAM Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Homarus americanus GN=GBETA1 PE=2 SV=1

 Score =  315 bits (806), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/160 (92%), Positives = 157/160 (98%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           +GHTGDVMSLSL+P+MRTF SGACDASAKLWDIRDG C+QTFPGHESDINAVTFFPNG A
Sbjct: 181 TGHTGDVMSLSLSPNMRTFTSGACDASAKLWDIRDGMCRQTFPGHESDINAVTFFPNGHA 240

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
           FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SG+LLLAGYDDFNCNVWDSM
Sbjct: 241 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGKLLLAGYDDFNCNVWDSM 300

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +TERAG+LAGHDNRVSCLGVTEDGMAVATGSWDSFL+IWN
Sbjct: 301 RTERAGVLAGHDNRVSCLGVTEDGMAVATGSWDSFLKIWN 340

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
Homarus americanus (taxid: 6706)

>sp|Q5GIS3|GBB_PINFU Guanine nucleotide-binding protein subunit beta OS=Pinctada fucata PE=1 SV=1

 Score =  312 bits (799), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 145/164 (88%), Positives = 156/164 (95%)

Query: 13  SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP 72
           + A +GHTGDVMSLSL+PDMRTFVSGACDASAKLWDIRDG CKQTF GHESDINA+T+FP
Sbjct: 178 TTAFTGHTGDVMSLSLSPDMRTFVSGACDASAKLWDIRDGMCKQTFSGHESDINAITYFP 237

Query: 73  NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
           NG+AFATGSDDATCRLFDIRADQE+ MYSHDNIICGITSVAFS+SGRLLL GYDDFNCNV
Sbjct: 238 NGYAFATGSDDATCRLFDIRADQEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNV 297

Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           WD ++ ERAG+LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Sbjct: 298 WDVLRQERAGVLAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 341

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Pinctada fucata (taxid: 50426)

>sp|P26308|GBB1_DROME Guanine nucleotide-binding protein subunit beta-1 OS=Drosophila melanogaster GN=Gbeta13F PE=1 SV=1

 Score =  310 bits (793), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 146/159 (91%), Positives = 154/159 (96%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVM+LSLAP  +TFVSGACDASAKLWDIR+G CKQTFPGHESDINAVTFFPNG AF
Sbjct: 182 GHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAF 241

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWD+MK
Sbjct: 242 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMK 301

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            ER+GILAGHDNRVSCLGVTE+GMAVATGSWDSFLR+WN
Sbjct: 302 AERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVWN 340

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Drosophila melanogaster (taxid: 7227)

>sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis elegans GN=gpb-1 PE=2 SV=2

 Score =  309 bits (791), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 146/162 (90%), Positives = 154/162 (95%)

Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
           A +GHTGDVMSLSL+PD RTF+SGACDASAKLWDIRDG CKQTFPGHESDINAV FFP+G
Sbjct: 179 AFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSG 238

Query: 75  WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
            AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLL AGYDDFNCNVWD
Sbjct: 239 NAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWD 298

Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           SM+ ERAG+LAGHDNRVSCLGVTEDGMAV TGSWDSFL+IWN
Sbjct: 299 SMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Caenorhabditis elegans (taxid: 6239)

>sp|Q61ZF6|GBB1_CAEBR Guanine nucleotide-binding protein subunit beta-1 OS=Caenorhabditis briggsae GN=gpb-1 PE=3 SV=1

 Score =  309 bits (791), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 146/162 (90%), Positives = 154/162 (95%)

Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
           A +GHTGDVMSLSL+PD RTF+SGACDASAKLWDIRDG CKQTFPGHESDINAV FFP+G
Sbjct: 179 AFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSG 238

Query: 75  WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
            AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLL AGYDDFNCNVWD
Sbjct: 239 NAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWD 298

Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           SM+ ERAG+LAGHDNRVSCLGVTEDGMAV TGSWDSFL+IWN
Sbjct: 299 SMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Caenorhabditis briggsae (taxid: 6238)

>sp|P23232|GBB_LOLFO Guanine nucleotide-binding protein subunit beta OS=Loligo forbesi PE=2 SV=1

 Score =  307 bits (786), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 144/159 (90%), Positives = 153/159 (96%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVMSLSLAPDMRTFVSGACDASAKL+DIRDG CKQTF GHESDINA+T+FPNG+AF
Sbjct: 183 GHTGDVMSLSLAPDMRTFVSGACDASAKLFDIRDGICKQTFTGHESDINAITYFPNGFAF 242

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFDIRADQE+ MYSHDNIICGITSVAFS+SGRLLL GYDDFNCNVWD +K
Sbjct: 243 ATGSDDATCRLFDIRADQEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDVLK 302

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            ERAG+LAGHDNRVSCLGVTEDGMAVATGSWDSFL+IWN
Sbjct: 303 QERAGVLAGHDNRVSCLGVTEDGMAVATGSWDSFLKIWN 341

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Loligo forbesi (taxid: 6618)

>sp|Q9HAV0|GBB4_HUMAN Guanine nucleotide-binding protein subunit beta-4 OS=Homo sapiens GN=GNB4 PE=1 SV=3

 Score =  300 bits (768), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 139/160 (86%), Positives = 155/160 (96%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           +GH+GDVMSLSL+PDMRTFVSGACDAS+KLWDIRDG C+Q+F GH SDINAV+FFPNG+A
Sbjct: 181 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA 240

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
           FATGSDDATCRLFD+RADQEL +YSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWD++
Sbjct: 241 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL 300

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFLRIWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Homo sapiens (taxid: 9606)

>sp|P54313|GBB2_RAT Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus GN=Gnb2 PE=1 SV=4

 Score =  296 bits (759), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
           F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Rattus norvegicus (taxid: 10116)

>sp|P62880|GBB2_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus GN=Gnb2 PE=1 SV=3

 Score =  296 bits (759), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
           F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Mus musculus (taxid: 10090)

>sp|P62879|GBB2_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Homo sapiens GN=GNB2 PE=1 SV=3

 Score =  296 bits (759), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct: 181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
           F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct: 241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
119888032	340	guanine nucleotide-binding protein subun	0.829	0.429	0.974	3e-87
307180607	340	Guanine nucleotide-binding protein G(I)/	0.829	0.429	0.974	6e-87
451774884	340	heterotrimeric guanine nucleotide-bindin	0.829	0.429	0.968	7e-87
307197086	329	Guanine nucleotide-binding protein G(I)/	0.829	0.443	0.974	2e-86
242018098	353	guanine nucleotide-binding protein G(I)/	0.829	0.413	0.962	5e-86
346468847	340	hypothetical protein [Amblyomma maculatu	0.835	0.432	0.943	5e-86
427789921	340	Putative g protein beta-subunit 13f [Rhi	0.835	0.432	0.943	5e-86
391344991	351	PREDICTED: guanine nucleotide-binding pr	0.823	0.413	0.955	6e-86
391344989	340	PREDICTED: guanine nucleotide-binding pr	0.829	0.429	0.955	6e-86
340724580	340	PREDICTED: guanine nucleotide-binding pr	0.829	0.429	0.962	8e-86

>gi|119888032|gb|ABM05967.1| guanine nucleotide-binding protein subunit beta-like [Microplitis mediator]

 Score =  325 bits (834), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/159 (97%), Positives = 159/159 (100%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR+GSCKQTFPGHESDINAVTFFPNG+AF
Sbjct: 182 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIREGSCKQTFPGHESDINAVTFFPNGYAF 241

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWDSMK
Sbjct: 242 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSMK 301

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Sbjct: 302 SERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340

Source: Microplitis mediator

Species: Microplitis mediator

Genus: Microplitis

Family: Braconidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180607|gb|EFN68562.1| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 [Camponotus floridanus]

 Score =  325 bits (832), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 155/159 (97%), Positives = 158/159 (99%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVMSLSLAPD RTFVSGACDASAKLWDIR+GSCKQTFPGHESDINAVTFFPNG+AF
Sbjct: 182 GHTGDVMSLSLAPDTRTFVSGACDASAKLWDIREGSCKQTFPGHESDINAVTFFPNGYAF 241

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWDSMK
Sbjct: 242 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSMK 301

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Sbjct: 302 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|451774884|gb|AGF50187.1| heterotrimeric guanine nucleotide-binding protein beta subunit [Bemisia tabaci]

 Score =  324 bits (831), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 154/159 (96%), Positives = 158/159 (99%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVMSLSLAPDM TFVSGACDASAKLWDIR+G+CKQTFPGHESDINAVTFFPNGWAF
Sbjct: 182 GHTGDVMSLSLAPDMHTFVSGACDASAKLWDIREGTCKQTFPGHESDINAVTFFPNGWAF 241

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFDIR+DQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWDSMK
Sbjct: 242 ATGSDDATCRLFDIRSDQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSMK 301

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Sbjct: 302 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 340

Source: Bemisia tabaci

Species: Bemisia tabaci

Genus: Bemisia

Family: Aleyrodidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197086|gb|EFN78454.1| Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 [Harpegnathos saltator]

 Score =  323 bits (828), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 155/159 (97%), Positives = 158/159 (99%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVMSLSLAPD RTFVSGACDASAKLWDIR+GSCKQTFPGHESDINAVTFFPNG+AF
Sbjct: 171 GHTGDVMSLSLAPDTRTFVSGACDASAKLWDIREGSCKQTFPGHESDINAVTFFPNGYAF 230

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWDSMK
Sbjct: 231 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSMK 290

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Sbjct: 291 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 329

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242018098|ref|XP_002429518.1| guanine nucleotide-binding protein G(I)/G(S)/G(T), subunit beta, putative [Pediculus humanus corporis] gi|212514462|gb|EEB16780.1| guanine nucleotide-binding protein G(I)/G(S)/G(T), subunit beta, putative [Pediculus humanus corporis]

 Score =  322 bits (824), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 153/159 (96%), Positives = 158/159 (99%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVMSLSL+PDMRTFVSGACDASAKLWDIR+G+CKQTFPGHESDINAVTFFPNG AF
Sbjct: 195 GHTGDVMSLSLSPDMRTFVSGACDASAKLWDIREGTCKQTFPGHESDINAVTFFPNGQAF 254

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWDS+K
Sbjct: 255 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSLK 314

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN
Sbjct: 315 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 353

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346468847|gb|AEO34268.1| hypothetical protein [Amblyomma maculatum]

 Score =  322 bits (824), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 151/160 (94%), Positives = 158/160 (98%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           +GHTGDVMSLSL+PDMRTFVSGACDASAKLWD+RDG CKQTFPGHESDINAVTFFPNG+A
Sbjct: 181 TGHTGDVMSLSLSPDMRTFVSGACDASAKLWDVRDGMCKQTFPGHESDINAVTFFPNGYA 240

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
           FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWDSM
Sbjct: 241 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSM 300

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           K ERAG+LAGHDNRVSCLGVTEDGMAVATGSWDSFL+IWN
Sbjct: 301 KAERAGVLAGHDNRVSCLGVTEDGMAVATGSWDSFLKIWN 340

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427789921|gb|JAA60412.1| Putative g protein beta-subunit 13f [Rhipicephalus pulchellus]

 Score =  322 bits (824), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 151/160 (94%), Positives = 158/160 (98%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           +GHTGDVMSLSL+PDMRTFVSGACDASAKLWD+RDG CKQTFPGHESDINAVTFFPNG+A
Sbjct: 181 TGHTGDVMSLSLSPDMRTFVSGACDASAKLWDVRDGMCKQTFPGHESDINAVTFFPNGYA 240

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
           FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWDSM
Sbjct: 241 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSM 300

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           K ERAG+LAGHDNRVSCLGVTEDGMAVATGSWDSFL+IWN
Sbjct: 301 KAERAGVLAGHDNRVSCLGVTEDGMAVATGSWDSFLKIWN 340

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|391344991|ref|XP_003746777.1| PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like isoform 2 [Metaseiulus occidentalis]

 Score =  321 bits (823), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 152/159 (95%), Positives = 157/159 (98%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG CKQTFPGHESDINAVTFFPNG+AF
Sbjct: 193 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGLCKQTFPGHESDINAVTFFPNGYAF 252

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFD+RADQELA+YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK
Sbjct: 253 ATGSDDATCRLFDLRADQELALYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 312

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            ERAG+LAGHDNRVSCLGVTEDGMAVATGSWDSFL+IWN
Sbjct: 313 AERAGVLAGHDNRVSCLGVTEDGMAVATGSWDSFLKIWN 351

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|391344989|ref|XP_003746776.1| PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like isoform 1 [Metaseiulus occidentalis]

 Score =  321 bits (823), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 152/159 (95%), Positives = 157/159 (98%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG CKQTFPGHESDINAVTFFPNG+AF
Sbjct: 182 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGLCKQTFPGHESDINAVTFFPNGYAF 241

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFD+RADQELA+YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK
Sbjct: 242 ATGSDDATCRLFDLRADQELALYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 301

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            ERAG+LAGHDNRVSCLGVTEDGMAVATGSWDSFL+IWN
Sbjct: 302 AERAGVLAGHDNRVSCLGVTEDGMAVATGSWDSFLKIWN 340

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724580|ref|XP_003400659.1| PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like [Bombus terrestris] gi|350397873|ref|XP_003485017.1| PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like [Bombus impatiens]

 Score =  321 bits (822), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 153/159 (96%), Positives = 156/159 (98%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTGDVMSLSLAPD RTFVSGACDASAKLWDIR+GSCKQTFPGHESDINAVTFFPNG+AF
Sbjct: 182 GHTGDVMSLSLAPDTRTFVSGACDASAKLWDIREGSCKQTFPGHESDINAVTFFPNGYAF 241

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWDSMK
Sbjct: 242 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDSMK 301

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            ERAGILAGHDNRVSCLGVTEDGMAV TGSWDSFLRIWN
Sbjct: 302 AERAGILAGHDNRVSCLGVTEDGMAVGTGSWDSFLRIWN 340

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
WB|WBGene00001679	340	gpb-1 [Caenorhabditis elegans	0.920	0.476	0.901	9.7e-80
FB|FBgn0001105	340	Gbeta13F "G protein beta-subun	0.903	0.467	0.918	1.2e-79
UNIPROTKB|Q9HAV0	340	GNB4 "Guanine nucleotide-bindi	0.909	0.470	0.868	2.1e-77
UNIPROTKB|P11017	340	GNB2 "Guanine nucleotide-bindi	0.909	0.470	0.868	7.1e-77
UNIPROTKB|E2RD95	340	GNB2 "Uncharacterized protein"	0.909	0.470	0.868	7.1e-77
UNIPROTKB|E7EP32	296	GNB2 "Guanine nucleotide-bindi	0.909	0.540	0.868	7.1e-77
UNIPROTKB|P62879	340	GNB2 "Guanine nucleotide-bindi	0.909	0.470	0.868	7.1e-77
MGI|MGI:95784	340	Gnb2 "guanine nucleotide bindi	0.909	0.470	0.868	7.1e-77
RGD|69319	340	Gnb2 "guanine nucleotide bindi	0.909	0.470	0.868	7.1e-77
UNIPROTKB|B3KPU1	240	GNB2 "Guanine nucleotide-bindi	0.909	0.666	0.868	7.1e-77

WB|WBGene00001679 gpb-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
 Identities = 146/162 (90%), Positives = 154/162 (95%)

Query:    15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
             A +GHTGDVMSLSL+PD RTF+SGACDASAKLWDIRDG CKQTFPGHESDINAV FFP+G
Sbjct:   179 AFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSG 238

Query:    75 WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
              AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLL AGYDDFNCNVWD
Sbjct:   239 NAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWD 298

Query:   135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             SM+ ERAG+LAGHDNRVSCLGVTEDGMAV TGSWDSFL+IWN
Sbjct:   299 SMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0035046 "pronuclear migration" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0000132 "establishment of mitotic spindle orientation" evidence=IMP

GO:0040013 "negative regulation of locomotion" evidence=IMP

GO:0046662 "regulation of oviposition" evidence=IMP

GO:0005834 "heterotrimeric G-protein complex" evidence=ISS

FB|FBgn0001105 Gbeta13F "G protein beta-subunit 13F" [Drosophila melanogaster (taxid:7227)]

 Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
 Identities = 146/159 (91%), Positives = 154/159 (96%)

Query:    18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
             GHTGDVM+LSLAP  +TFVSGACDASAKLWDIR+G CKQTFPGHESDINAVTFFPNG AF
Sbjct:   182 GHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAF 241

Query:    78 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
             ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWD+MK
Sbjct:   242 ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMK 301

Query:   138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
              ER+GILAGHDNRVSCLGVTE+GMAVATGSWDSFLR+WN
Sbjct:   302 AERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVWN 340

GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS

GO:0003924 "GTPase activity" evidence=ISS;NAS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISS;NAS

GO:0055059 "asymmetric neuroblast division" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0045176 "apical protein localization" evidence=TAS

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|Q9HAV0 GNB4 "Guanine nucleotide-binding protein subunit beta-4" [Homo sapiens (taxid:9606)]

 Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
 Identities = 139/160 (86%), Positives = 155/160 (96%)

Query:    17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
             +GH+GDVMSLSL+PDMRTFVSGACDAS+KLWDIRDG C+Q+F GH SDINAV+FFPNG+A
Sbjct:   181 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA 240

Query:    77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             FATGSDDATCRLFD+RADQEL +YSHDNIICGITSVAFS+SGRLLLAGYDDFNCNVWD++
Sbjct:   241 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL 300

Query:   137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFLRIWN
Sbjct:   301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=TAS

GO:0006112 "energy reserve metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0071377 "cellular response to glucagon stimulus" evidence=TAS

UNIPROTKB|P11017 GNB2 "Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2" [Bos taurus (taxid:9913)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query:    17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
             +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct:   181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240

Query:    77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct:   241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300

Query:   137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct:   301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

GO:0006184 "GTP catabolic process" evidence=IDA

GO:0005834 "heterotrimeric G-protein complex" evidence=IDA

GO:0003924 "GTPase activity" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0051020 "GTPase binding" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

UNIPROTKB|E2RD95 GNB2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query:    17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
             +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct:   181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240

Query:    77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct:   241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300

Query:   137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct:   301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

GO:0051020 "GTPase binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

UNIPROTKB|E7EP32 GNB2 "Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2" [Homo sapiens (taxid:9606)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query:    17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
             +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct:   137 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 196

Query:    77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct:   197 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 256

Query:   137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct:   257 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0044297 "cell body" evidence=IEA

UNIPROTKB|P62879 GNB2 "Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2" [Homo sapiens (taxid:9606)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query:    17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
             +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct:   181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240

Query:    77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct:   241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300

Query:   137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct:   301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0044297 "cell body" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0051020 "GTPase binding" evidence=IPI

GO:0003924 "GTPase activity" evidence=TAS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0006112 "energy reserve metabolic process" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0071377 "cellular response to glucagon stimulus" evidence=TAS

GO:0006184 "GTP catabolic process" evidence=TAS

MGI|MGI:95784 Gnb2 "guanine nucleotide binding protein (G protein), beta 2" [Mus musculus (taxid:10090)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query:    17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
             +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct:   181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240

Query:    77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct:   241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300

Query:   137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct:   301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

GO:0003924 "GTPase activity" evidence=ISA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005834 "heterotrimeric G-protein complex" evidence=ISA

GO:0006184 "GTP catabolic process" evidence=ISA

GO:0007165 "signal transduction" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=TAS

GO:0043234 "protein complex" evidence=ISO

GO:0044297 "cell body" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0051020 "GTPase binding" evidence=ISO

RGD|69319 Gnb2 "guanine nucleotide binding protein (G protein), beta polypeptide 2" [Rattus norvegicus (taxid:10116)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query:    17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
             +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct:   181 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 240

Query:    77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct:   241 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 300

Query:   137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct:   301 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=IMP

GO:0043234 "protein complex" evidence=IDA

GO:0044297 "cell body" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;ISS

GO:0051020 "GTPase binding" evidence=IEA;ISO

UNIPROTKB|B3KPU1 GNB2 "Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2" [Homo sapiens (taxid:9606)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 139/160 (86%), Positives = 151/160 (94%)

Query:    17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
             +GH+GDVMSLSLAPD RTFVSGACDAS KLWD+RD  C+QTF GHESDINAV FFPNG+A
Sbjct:    81 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 140

Query:    77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             F TGSDDATCRLFD+RADQEL MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN+WD+M
Sbjct:   141 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM 200

Query:   137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             K +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct:   201 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0044297 "cell body" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P54313	GBB2_RAT	No assigned EC number	0.8687	0.8352	0.4323	yes	N/A
P17343	GBB1_CAEEL	No assigned EC number	0.9012	0.8465	0.4382	yes	N/A
Q6PH57	GBB1_DANRE	No assigned EC number	0.8625	0.8352	0.4323	yes	N/A
Q61ZF6	GBB1_CAEBR	No assigned EC number	0.9012	0.8465	0.4382	N/A	N/A
O45040	GBB1_HOMAM	No assigned EC number	0.925	0.8352	0.4323	N/A	N/A
P62880	GBB2_MOUSE	No assigned EC number	0.8687	0.8352	0.4323	yes	N/A
Q5R5W8	GBB1_PONAB	No assigned EC number	0.8544	0.8238	0.4264	yes	N/A
P23232	GBB_LOLFO	No assigned EC number	0.9056	0.8295	0.4281	N/A	N/A
Q9HAV0	GBB4_HUMAN	No assigned EC number	0.8687	0.8352	0.4323	yes	N/A
P26308	GBB1_DROME	No assigned EC number	0.9182	0.8295	0.4294	yes	N/A
P36408	GBB_DICDI	No assigned EC number	0.7106	0.8977	0.4553	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	176
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-46
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	8e-34
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-31
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	5e-23
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-22
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-20
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-20
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-13
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-12
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-08
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-07
smart00320	40	smart00320, WD40, WD40 repeats	2e-07
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	4e-07
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	4e-04
smart00320	40	smart00320, WD40, WD40 repeats	5e-04
smart00320	40	smart00320, WD40, WD40 repeats	0.001
PTZ00421	493	PTZ00421, PTZ00421, coronin; Provisional	0.004

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  152 bits (385), Expect = 5e-46
 Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 6/161 (3%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           GHT  V S++ +PD  TFV+ +  D + KLWD+R G C  T  GH  ++N+V F P+G  
Sbjct: 133 GHTDWVNSVAFSPD-GTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEK 191

Query: 77  FATGSDDATCRLFDIRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
             + S D T +L+D+   + L     H+N +    SVAFS  G LL +G +D    VWD 
Sbjct: 192 LLSSSSDGTIKLWDLSTGKCLGTLRGHENGVN---SVAFSPDGYLLASGSEDGTIRVWDL 248

Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
              E    L+GH N V+ L  + DG  +A+GS D  +RIW+
Sbjct: 249 RTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  120 bits (303), Expect = 8e-34
 Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 2/159 (1%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTG V  ++ +PD +   +G+ D + K+WD+  G   +T  GH   +  V    +G   
Sbjct: 7   GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYL 66

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
           A+GS D T RL+D+   + +   +       ++SVAFS  GR+L +   D    VWD   
Sbjct: 67  ASGSSDKTIRLWDLETGECVRTLTGHT--SYVSSVAFSPDGRILSSSSRDKTIKVWDVET 124

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            +    L GH + V+ +  + DG  VA+ S D  +++W+
Sbjct: 125 GKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWD 163

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  113 bits (284), Expect = 5e-31
 Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 4/160 (2%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHT  V S++ +PD R   S + D + K+WD+  G C  T  GH   +N+V F P+G   
Sbjct: 91  GHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFV 150

Query: 78  ATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
           A+ S D T +L+D+R  + +A  + H      + SVAFS  G  LL+   D    +WD  
Sbjct: 151 ASSSQDGTIKLWDLRTGKCVATLTGHTG---EVNSVAFSPDGEKLLSSSSDGTIKLWDLS 207

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             +  G L GH+N V+ +  + DG  +A+GS D  +R+W+
Sbjct: 208 TGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWD 247

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 94.4 bits (233), Expect = 5e-23
 Identities = 55/163 (33%), Positives = 92/163 (56%), Gaps = 6/163 (3%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNG 74
           SGH+  V+S++ +PD +   SG+ D + +LWD+  G      T  GHE  +++++F P+G
Sbjct: 281 SGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDG 340

Query: 75  WAFATG-SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
               +G SDD T RL+D+R  + L      +    + SV+FS  GR++ +G  D    +W
Sbjct: 341 SLLVSGGSDDGTIRLWDLRTGKPLKTLEGHS---NVLSVSFSPDGRVVSSGSTDGTVRLW 397

Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           D         L GH +RV+ L  + DG ++A+GS D+ +R+W+
Sbjct: 398 DLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWD 440

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 92.8 bits (229), Expect = 2e-22
 Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 5/163 (3%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG- 74
            GH+  V SL+ +PD +   SG+  D + KLWD+R G    T  GH   ++++ F P+G 
Sbjct: 152 EGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGG 211

Query: 75  WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
              A+GS D T RL+D+   + L      +    ++S  FS  G LL +G  D    +WD
Sbjct: 212 LLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSS--FSPDGSLLASGSSDGTIRLWD 269

Query: 135 -SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
               +     L+GH + V  +  + DG  +A+GS D  +R+W+
Sbjct: 270 LRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWD 312

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 85.9 bits (211), Expect = 4e-20
 Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 4/162 (2%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR-DGSCKQTFPGHESDINAVTFFPNGW 75
           SGH+  V+S S +PD     SG+ D + +LWD+R   S  +T  GH S + +V F P+G 
Sbjct: 239 SGHSDSVVS-SFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGK 297

Query: 76  AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWD 134
             A+GS D T RL+D+   + L+  +       ++S++FS  G  L+  G DD    +WD
Sbjct: 298 LLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWD 357

Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
               +    L GH N V  +  + DG  V++GS D  +R+W+
Sbjct: 358 LRTGKPLKTLEGHSN-VLSVSFSPDGRVVSSGSTDGTVRLWD 398

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 83.9 bits (208), Expect = 6e-20
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 54  CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA-MYSHDNIICGITSV 112
            ++T  GH   +  V F P+G   ATGS D T +++D+   + L  +  H      +  V
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTG---PVRDV 57

Query: 113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172
           A S  G  L +G  D    +WD    E    L GH + VS +  + DG  +++ S D  +
Sbjct: 58  AASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTI 117

Query: 173 RIWN 176
           ++W+
Sbjct: 118 KVWD 121

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 67.4 bits (163), Expect = 1e-13
 Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 10/167 (5%)

Query: 17  SGHTGDVMSLSLA-PDMRTFVS--GACDASAKLWDIR-DGSCKQTFPGHESDINAVTFFP 72
             H   V  L+L+ PD  + +    + D + KLWD+   G   +T  GH   + ++ F P
Sbjct: 106 GLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSP 165

Query: 73  NG-WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNC 130
           +G    +  S D T +L+D+R  + L+  +       ++S+AFS  G LL+A    D   
Sbjct: 166 DGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHT--DPVSSLAFSPDGGLLIASGSSDGTI 223

Query: 131 NVWD-SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            +WD S        L+GH + V     + DG  +A+GS D  +R+W+
Sbjct: 224 RLWDLSTGKLLRSTLSGHSDSVVSS-FSPDGSLLASGSSDGTIRLWD 269

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 63.2 bits (152), Expect = 4e-12
 Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 12/183 (6%)

Query: 3   DHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFPG- 60
           D L     L S    GH   + S++ +PD    +SG+ D + KLWD+ +G    ++  G 
Sbjct: 48  DSLVSLPDLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGL 107

Query: 61  HESDINAVTFF-PNGWAFAT--GSDDATCRLFDIRADQELAMY--SHDNIICGITSVAFS 115
           H+S ++ +    P+G +      S D T +L+D+    +L      H      +TS+AFS
Sbjct: 108 HDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSES---VTSLAFS 164

Query: 116 RSGRLLLAG-YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSFLR 173
             G+LL +G   D    +WD    +    LAGH + VS L  + DG + +A+GS D  +R
Sbjct: 165 PDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIR 224

Query: 174 IWN 176
           +W+
Sbjct: 225 LWD 227

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 51.6 bits (122), Expect = 4e-08
 Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 6/165 (3%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
            G + + +SL       + +      S  L  + D S      GHE  I ++ F P+G  
Sbjct: 21  LGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLS-SLLLRGHEDSITSIAFSPDGEL 79

Query: 77  FATGSDDATCRLFDIR-ADQELAMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
             +GS D T +L+D+   ++ +      HD+ +  +   +   +  LL +   D    +W
Sbjct: 80  LLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139

Query: 134 D-SMKTERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSFLRIWN 176
           D S   +    L GH   V+ L  + DG +  +  S D  +++W+
Sbjct: 140 DLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWD 184

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 49.7 bits (117), Expect = 2e-07
 Identities = 28/75 (37%), Positives = 46/75 (61%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
               +V+S+S +PD R   SG+ D + +LWD+  GS  +   GH S + ++ F P+G + 
Sbjct: 368 EGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSL 427

Query: 78  ATGSDDATCRLFDIR 92
           A+GS D T RL+D++
Sbjct: 428 ASGSSDNTIRLWDLK 442

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 45.0 bits (107), Expect = 2e-07
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 51 DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 90
           G   +T  GH   + +V F P+G   A+GSDD T +L+D
Sbjct: 1  SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 44.3 bits (105), Expect = 4e-07
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 52 GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD 90
          G   +T  GH   + +V F P+G   A+GSDD T R++D
Sbjct: 1  GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWD 48
           GHTG V S++ +PD     SG+ D + ++WD
Sbjct: 8  KGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 142 GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             L GH   V+ +  + DG  +A+GS D  +R+W+
Sbjct: 5   RTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.8 bits (83), Expect = 5e-04
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 143 ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            L GH   V+ +  + DG  +A+GS D  +++W+
Sbjct: 7   TLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 15/32 (46%), Positives = 21/32 (65%)

Query: 17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWD 48
           GHTG V S++ +PD +   SG+ D + KLWD
Sbjct: 9  KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional

 Score = 36.8 bits (85), Expect = 0.004
 Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 22/137 (16%)

Query: 18  GHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           GHT  V  +S  P  M    S   D    +WD+  G   +    H   I ++ +  +G  
Sbjct: 123 GHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSL 182

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD----FNCN- 131
             T S D    + D R            I+  + + A ++S R L A   D      C+ 
Sbjct: 183 LCTTSKDKKLNIIDPR---------DGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSK 233

Query: 132 -------VWDSMKTERA 141
                  +WD+ K    
Sbjct: 234 SQQRQIMLWDTRKMASP 250

Length = 493

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	176
KOG0286|consensus	343		100.0
KOG0263|consensus	707		100.0
KOG0272|consensus	459		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0279|consensus	315		100.0
KOG0263|consensus	707		100.0
KOG0291|consensus	893		100.0
KOG0285|consensus	460		99.98
KOG0266|consensus	456		99.97
KOG0315|consensus	311		99.97
KOG0286|consensus	343		99.97
KOG0271|consensus	480		99.97
KOG0295|consensus	406		99.96
PTZ00421	493	coronin; Provisional	99.96
KOG0282|consensus	503		99.96
KOG0266|consensus	456		99.96
KOG0276|consensus	794		99.96
KOG0279|consensus	315		99.96
KOG0275|consensus	508		99.96
KOG0645|consensus	312		99.96
KOG0319|consensus	775		99.96
PTZ00420	568	coronin; Provisional	99.96
KOG0273|consensus	524		99.96
KOG0284|consensus	464		99.96
KOG0284|consensus	464		99.95
KOG0640|consensus	430		99.95
KOG0289|consensus	506		99.95
KOG0265|consensus	338		99.94
KOG0277|consensus	311		99.94
KOG0283|consensus	712		99.94
KOG0265|consensus	338		99.94
KOG0645|consensus	312		99.94
KOG0296|consensus	399		99.94
KOG0643|consensus	327		99.94
KOG0285|consensus	460		99.94
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.94
KOG0315|consensus	311		99.94
KOG0281|consensus	499		99.94
KOG0267|consensus	825		99.94
KOG0319|consensus	775		99.94
KOG0292|consensus	1202		99.94
KOG0292|consensus	1202		99.94
KOG0313|consensus	423		99.94
KOG0316|consensus	307		99.94
KOG0643|consensus	327		99.93
KOG0282|consensus	503		99.93
KOG0316|consensus	307		99.93
KOG0276|consensus	794		99.93
PTZ00421	493	coronin; Provisional	99.93
KOG0273|consensus	524		99.93
KOG0278|consensus	334		99.93
KOG0295|consensus	406		99.93
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
KOG0310|consensus	487		99.93
KOG0293|consensus	519		99.93
KOG0274|consensus	537		99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
KOG0318|consensus	603		99.93
KOG0313|consensus	423		99.92
KOG0296|consensus	399		99.92
KOG0283|consensus	712		99.92
KOG0302|consensus	440		99.92
KOG0264|consensus	422		99.92
KOG0318|consensus	603		99.92
KOG0281|consensus	499		99.91
KOG1332|consensus	299		99.91
KOG1446|consensus	311		99.91
KOG0289|consensus	506		99.91
KOG0646|consensus	476		99.91
KOG0640|consensus	430		99.91
KOG0293|consensus	519		99.91
KOG0269|consensus	839		99.91
PTZ00420	568	coronin; Provisional	99.91
KOG0294|consensus	362		99.91
KOG0269|consensus	839		99.91
KOG0306|consensus	888		99.91
KOG0772|consensus	641		99.9
KOG0264|consensus	422		99.9
KOG0641|consensus	350		99.9
KOG1407|consensus	313		99.9
KOG0308|consensus	735		99.9
KOG0305|consensus	484		99.89
KOG0291|consensus	893		99.89
KOG0305|consensus	484		99.89
KOG0277|consensus	311		99.89
KOG0647|consensus	347		99.89
KOG0306|consensus	888		99.89
KOG0288|consensus	459		99.89
KOG0300|consensus	481		99.89
KOG0299|consensus	479		99.89
KOG0270|consensus	463		99.89
KOG0301|consensus	745		99.88
KOG0299|consensus	479		99.88
KOG0310|consensus	487		99.88
KOG0274|consensus	537		99.88
KOG2096|consensus	420		99.87
KOG0973|consensus	942		99.87
KOG0294|consensus	362		99.87
KOG1273|consensus	405		99.87
KOG4283|consensus	397		99.87
KOG0303|consensus	472		99.87
KOG0973|consensus	942		99.87
KOG1332|consensus	299		99.87
KOG0300|consensus	481		99.87
KOG0647|consensus	347		99.86
KOG0302|consensus	440		99.86
KOG0267|consensus	825		99.86
KOG0275|consensus	508		99.86
KOG0639|consensus	705		99.86
KOG0308|consensus	735		99.85
KOG0288|consensus	459		99.85
KOG0641|consensus	350		99.85
KOG0301|consensus	745		99.85
KOG1446|consensus	311		99.85
KOG0268|consensus	433		99.85
KOG1274|consensus	933		99.85
KOG0642|consensus	577		99.84
KOG0278|consensus	334		99.84
KOG1036|consensus	323		99.82
KOG4283|consensus	397		99.82
KOG0772|consensus	641		99.82
KOG0646|consensus	476		99.82
KOG0639|consensus	705		99.81
KOG2445|consensus	361		99.81
KOG0268|consensus	433		99.8
KOG2106|consensus	626		99.8
KOG1407|consensus	313		99.8
KOG1036|consensus	323		99.8
KOG0322|consensus	323		99.79
KOG1539|consensus	910		99.79
KOG1274|consensus	933		99.79
KOG2445|consensus	361		99.77
KOG1408|consensus	1080		99.76
KOG0307|consensus	1049		99.75
KOG4328|consensus	498		99.75
KOG0650|consensus	733		99.75
KOG1009|consensus	434		99.74
KOG2055|consensus	514		99.74
KOG0290|consensus	364		99.74
KOG1188|consensus	376		99.74
KOG1539|consensus	910		99.74
KOG0771|consensus	398		99.74
KOG0321|consensus	720		99.73
KOG1034|consensus	385		99.73
KOG2048|consensus	691		99.73
KOG4328|consensus	498		99.73
KOG0321|consensus	720		99.73
COG2319	466	FOG: WD40 repeat [General function prediction only	99.72
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.72
KOG2055|consensus	514		99.72
KOG1063|consensus	764		99.71
KOG2096|consensus	420		99.71
KOG1034|consensus	385		99.71
KOG1007|consensus	370		99.71
KOG2394|consensus	636		99.71
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.7
KOG0649|consensus	325		99.7
KOG2048|consensus	691		99.7
KOG1523|consensus	361		99.69
KOG1063|consensus	764		99.68
KOG2919|consensus	406		99.68
KOG1523|consensus	361		99.68
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.68
KOG1408|consensus	1080		99.67
KOG1310|consensus	758		99.67
KOG0303|consensus	472		99.66
KOG4378|consensus	673		99.66
KOG1538|consensus	1081		99.66
KOG1273|consensus	405		99.65
KOG2106|consensus	626		99.64
KOG0649|consensus	325		99.63
KOG1188|consensus	376		99.62
KOG1538|consensus	1081		99.62
KOG0307|consensus	1049		99.62
KOG1007|consensus	370		99.61
KOG1445|consensus	1012		99.6
KOG2110|consensus	391		99.6
KOG0642|consensus	577		99.6
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.59
KOG4227|consensus	609		99.58
KOG0270|consensus	463		99.58
KOG1009|consensus	434		99.58
COG2319	466	FOG: WD40 repeat [General function prediction only	99.58
KOG4378|consensus	673		99.58
KOG0974|consensus	967		99.57
KOG2110|consensus	391		99.56
KOG1272|consensus	545		99.56
KOG1445|consensus	1012		99.55
KOG0644|consensus	1113		99.53
KOG1524|consensus	737		99.53
KOG2111|consensus	346		99.53
KOG1517|consensus	1387		99.53
KOG2919|consensus	406		99.53
KOG0650|consensus	733		99.53
KOG0771|consensus	398		99.52
KOG0644|consensus	1113		99.51
KOG3881|consensus	412		99.5
KOG1524|consensus	737		99.49
KOG2321|consensus	703		99.48
PRK01742	429	tolB translocation protein TolB; Provisional	99.47
KOG1517|consensus	1387		99.46
KOG2394|consensus	636		99.45
KOG1310|consensus	758		99.45
KOG1587|consensus	555		99.44
PRK11028	330	6-phosphogluconolactonase; Provisional	99.44
KOG0322|consensus	323		99.43
KOG1963|consensus	792		99.42
PRK11028	330	6-phosphogluconolactonase; Provisional	99.42
PRK01742	429	tolB translocation protein TolB; Provisional	99.41
KOG0974|consensus	967		99.4
KOG1240|consensus	1431		99.39
KOG4547|consensus	541		99.39
KOG2111|consensus	346		99.39
KOG1272|consensus	545		99.39
PRK05137	435	tolB translocation protein TolB; Provisional	99.38
KOG1963|consensus	792		99.37
KOG4227|consensus	609		99.36
KOG4190|consensus	1034		99.36
PRK04922	433	tolB translocation protein TolB; Provisional	99.34
KOG2139|consensus	445		99.34
PRK03629	429	tolB translocation protein TolB; Provisional	99.32
PRK02889	427	tolB translocation protein TolB; Provisional	99.31
KOG1587|consensus	555		99.3
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.3
KOG2139|consensus	445		99.29
KOG0290|consensus	364		99.26
KOG2321|consensus	703		99.25
KOG3881|consensus	412		99.22
KOG1334|consensus	559		99.18
PRK03629	429	tolB translocation protein TolB; Provisional	99.18
PRK04922	433	tolB translocation protein TolB; Provisional	99.14
KOG0280|consensus	339		99.12
PRK00178	430	tolB translocation protein TolB; Provisional	99.12
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.12
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.12
PRK05137	435	tolB translocation protein TolB; Provisional	99.12
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.09
PRK02889	427	tolB translocation protein TolB; Provisional	99.08
KOG4497|consensus	447		99.08
KOG1064|consensus	2439		99.06
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.06
KOG1334|consensus	559		99.05
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.05
KOG3914|consensus	390		99.05
KOG1409|consensus	404		99.04
PRK04792	448	tolB translocation protein TolB; Provisional	99.04
KOG4547|consensus	541		99.02
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.0
KOG1354|consensus	433		98.98
KOG1354|consensus	433		98.97
PRK01029	428	tolB translocation protein TolB; Provisional	98.95
KOG2695|consensus	425		98.95
KOG0280|consensus	339		98.88
KOG1275|consensus	1118		98.88
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.85
KOG2315|consensus	566		98.84
KOG1240|consensus	1431		98.84
PRK01029	428	tolB translocation protein TolB; Provisional	98.81
PRK00178	430	tolB translocation protein TolB; Provisional	98.81
KOG3914|consensus	390		98.81
KOG4714|consensus	319		98.8
COG4946	668	Uncharacterized protein related to the periplasmic	98.78
KOG4497|consensus	447		98.76
KOG1409|consensus	404		98.76
KOG1064|consensus	2439		98.72
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.71
KOG0309|consensus	1081		98.69
KOG2695|consensus	425		98.69
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.67
KOG4532|consensus	344		98.66
PRK04792	448	tolB translocation protein TolB; Provisional	98.66
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.62
KOG2066|consensus	846		98.61
KOG2041|consensus	1189		98.61
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.58
KOG2314|consensus	698		98.58
KOG2315|consensus	566		98.57
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.56
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.54
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.5
KOG0309|consensus	1081		98.5
KOG1832|consensus	1516		98.5
KOG2114|consensus	933		98.46
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.45
KOG4532|consensus	344		98.44
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.43
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.4
PRK04043	419	tolB translocation protein TolB; Provisional	98.4
KOG2066|consensus	846		98.4
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.39
PRK04043	419	tolB translocation protein TolB; Provisional	98.36
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.35
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.34
KOG0882|consensus	558		98.29
KOG4190|consensus	1034		98.29
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.28
COG4946	668	Uncharacterized protein related to the periplasmic	98.28
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.22
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.22
KOG1912|consensus	1062		98.18
KOG1912|consensus	1062		98.18
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.17
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.16
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.15
KOG4640|consensus	665		98.14
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.14
KOG1645|consensus	463		98.1
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.1
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.1
KOG0882|consensus	558		98.1
KOG4714|consensus	319		98.09
KOG2041|consensus	1189		98.07
KOG1275|consensus	1118		98.06
KOG1008|consensus	783		98.03
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.01
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.99
KOG1008|consensus	783		97.96
PRK02888	635	nitrous-oxide reductase; Validated	97.95
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.93
KOG3621|consensus	726		97.92
KOG3617|consensus	1416		97.92
KOG1920|consensus	1265		97.89
KOG1920|consensus	1265		97.89
KOG3617|consensus	1416		97.87
PRK02888	635	nitrous-oxide reductase; Validated	97.83
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.78
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.77
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.77
KOG2395|consensus	644		97.77
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	97.75
KOG2314|consensus	698		97.71
KOG3621|consensus	726		97.69
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	97.47
COG3391	381	Uncharacterized conserved protein [Function unknow	97.46
KOG2114|consensus	933		97.46
KOG2444|consensus	238		97.46
KOG1645|consensus	463		97.45
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.38
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	97.34
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.28
KOG4640|consensus	665		97.25
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.16
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.14
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.13
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.1
KOG2079|consensus	1206		97.07
KOG2079|consensus	1206		97.06
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.03
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.01
KOG4649|consensus	354		96.89
PRK13616	591	lipoprotein LpqB; Provisional	96.82
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.71
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.7
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.64
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.63
KOG4499|consensus	310		96.6
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.58
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	96.56
PHA02713	557	hypothetical protein; Provisional	96.48
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.46
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.41
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	96.22
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	96.1
KOG2444|consensus	238		96.09
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.08
PHA02713	557	hypothetical protein; Provisional	96.05
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	95.97
KOG4649|consensus	354		95.93
PRK13684	334	Ycf48-like protein; Provisional	95.76
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.76
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	95.75
KOG4441|consensus	571		95.69
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.68
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.68
PRK13616	591	lipoprotein LpqB; Provisional	95.52
KOG2395|consensus	644		95.46
KOG3630|consensus	1405		95.4
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.24
KOG1832|consensus	1516		95.24
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	95.24
PHA03098	534	kelch-like protein; Provisional	95.23
COG3391	381	Uncharacterized conserved protein [Function unknow	95.02
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	95.02
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	95.01
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	94.96
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	94.85
PHA03098	534	kelch-like protein; Provisional	94.65
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	94.63
KOG4441|consensus	571		94.61
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.57
PHA02790	480	Kelch-like protein; Provisional	94.54
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	94.54
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	94.43
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	94.07
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	93.97
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	93.91
KOG1916|consensus	1283		93.88
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	93.88
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	93.81
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	93.79
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	93.76
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	93.71
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	93.59
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	93.59
COG5167	776	VID27 Protein involved in vacuole import and degra	93.37
KOG4499|consensus	310		93.3
PHA02790	480	Kelch-like protein; Provisional	93.19
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	93.06
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	92.91
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	92.21
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	91.98
KOG1897|consensus	1096		91.94
PLN00033	398	photosystem II stability/assembly factor; Provisio	91.88
COG4590	733	ABC-type uncharacterized transport system, permeas	91.82
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	91.59
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	91.36
PF14727	418	PHTB1_N: PTHB1 N-terminus	91.2
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	91.07
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	90.78
KOG2247|consensus	615		90.57
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	90.4
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	90.38
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	89.72
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	89.38
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	89.35
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	88.79
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	88.28
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	88.15
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	87.28
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	87.19
KOG4460|consensus	741		86.9
KOG3630|consensus	1405		86.16
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	85.92
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	85.91
KOG4460|consensus	741		85.19
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	84.25
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	83.85
COG5167	776	VID27 Protein involved in vacuole import and degra	83.78
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	83.52
KOG1916|consensus	1283		83.49
KOG1900|consensus	1311		83.32
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	82.98
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	81.82
KOG2377|consensus	657		81.31
COG4590	733	ABC-type uncharacterized transport system, permeas	81.19
PF12768	281	Rax2: Cortical protein marker for cell polarity	80.7
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	80.61

>KOG0286|consensus

Probab=100.00  E-value=5.6e-40  Score=231.87  Aligned_cols=173  Identities=74%  Similarity=1.245  Sum_probs=165.0

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEe
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATG   80 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~   80 (176)
                      .|++|++....  .+.||.+.|.+++++| +++.+++|+.|++.++||++++.+.++|.+|++.|++++|+|+|.-|++|
T Consensus       170 lWDie~g~~~~--~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatG  247 (343)
T KOG0286|consen  170 LWDIETGQQTQ--VFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATG  247 (343)
T ss_pred             EEEcccceEEE--EecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeec
Confidence            46677766644  6789999999999999 99999999999999999999999999999999999999999999999999


Q ss_pred             eCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC
Q psy15417         81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus        81 s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~  160 (176)
                      ++|++.++||+|.++++..|+++....+|++++|+..|++|++|..|.++.+||..+++....+.+|.++|+|+..+|+|
T Consensus       248 SDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG  327 (343)
T KOG0286|consen  248 SDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDG  327 (343)
T ss_pred             CCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCC
Confidence            99999999999999999999988888999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEccCCCcEEEeC
Q psy15417        161 MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 ~~l~tg~~d~~v~vwd  176 (176)
                      ..++|||||.++|||.
T Consensus       328 ~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  328 MAVATGSWDSTLRIWA  343 (343)
T ss_pred             cEEEecchhHheeecC
Confidence            9999999999999995

>KOG0263|consensus

Probab=100.00  E-value=2.3e-34  Score=224.62  Aligned_cols=159  Identities=30%  Similarity=0.583  Sum_probs=149.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +.||+++|+.+.|+|+.++|++||.|++|++|.+.+..+.-.++||..||..+.|.|-|.+|+|+|.|++.++|.....+
T Consensus       447 L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~  526 (707)
T KOG0263|consen  447 LYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNK  526 (707)
T ss_pred             eecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999987666


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      +++.+.  ++...|.|+.|||+..++++|+.|.++|+||+.++..+..+.+|..+|.+++|+|+|.+|++|+.|+.|++|
T Consensus       527 PlRifa--ghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iW  604 (707)
T KOG0263|consen  527 PLRIFA--GHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIW  604 (707)
T ss_pred             chhhhc--ccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEE
Confidence            655442  333568899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       605 D  605 (707)
T KOG0263|consen  605 D  605 (707)
T ss_pred             E
Confidence            7

>KOG0272|consensus

Probab=100.00  E-value=3.8e-35  Score=215.79  Aligned_cols=161  Identities=29%  Similarity=0.474  Sum_probs=150.0

Q ss_pred             cccCCCccCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         14 PAASGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      ..+.||.+.|.++.|+|.  +..++||+.||++++|++.+...+..+.+|...|..++|+|+|++|.|++.|.+-++||+
T Consensus       211 ~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~  290 (459)
T KOG0272|consen  211 QTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDL  290 (459)
T ss_pred             EEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhccc
Confidence            357899999999999997  568999999999999999998999999999999999999999999999999999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      ++.+++..  .+++..+|.+++|+|||.++++|+.|..-+|||+.+++++..+.+|...|..++|+|+|-.|||||.|++
T Consensus       291 ~tk~ElL~--QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt  368 (459)
T KOG0272|consen  291 ETKSELLL--QEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNT  368 (459)
T ss_pred             ccchhhHh--hcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCc
Confidence            98766533  3344568999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      +||||
T Consensus       369 ~kVWD  373 (459)
T KOG0272|consen  369 CKVWD  373 (459)
T ss_pred             EEEee
Confidence            99997

>KOG0271|consensus

Probab=100.00  E-value=8.8e-34  Score=206.89  Aligned_cols=164  Identities=26%  Similarity=0.457  Sum_probs=146.8

Q ss_pred             CCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         11 LGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        11 ~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      .++-++.||.++|.|++|+|++..|++|+.|-++++||..+.....++++|...|.+++|+|||+.+++|+.||.|++||
T Consensus       106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwd  185 (480)
T KOG0271|consen  106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWD  185 (480)
T ss_pred             eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEec
Confidence            44556789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECC-----CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSR-----SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      .++++++.. ....+...|++++|.|     ..+.|++++.||.++|||+..+.++..+.+|...|+|+.|.-+ .+|.+
T Consensus       186 pktg~~~g~-~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliyS  263 (480)
T KOG0271|consen  186 PKTGQQIGR-ALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYS  263 (480)
T ss_pred             CCCCCcccc-cccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEe
Confidence            998877532 2333445688888876     4578999999999999999999999999999999999999855 48899


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      ||.|++||+|+
T Consensus       264 gS~DrtIkvw~  274 (480)
T KOG0271|consen  264 GSQDRTIKVWR  274 (480)
T ss_pred             cCCCceEEEEE
Confidence            99999999995

>KOG0272|consensus

Probab=100.00  E-value=4.7e-34  Score=210.06  Aligned_cols=159  Identities=32%  Similarity=0.617  Sum_probs=147.8

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..||+..|.+++|.+||.+++||+.|..-++||+++++++..+.+|..+|.+|.|+|+|.+++|||.|++++|||++.-+
T Consensus       299 QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~  378 (459)
T KOG0272|consen  299 QEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRS  378 (459)
T ss_pred             hcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccc
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999998766


Q ss_pred             eeeEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         96 ELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      .+..  .+.+..-|+.|.|.| .|.+|++++.|+++++|..+.+.++..+.+|.++|.++++++++.+++|++.|+++|+
T Consensus       379 ~ly~--ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KL  456 (459)
T KOG0272|consen  379 ELYT--IPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKL  456 (459)
T ss_pred             ccee--cccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeee
Confidence            5433  333445688899999 6889999999999999999999999999999999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      |.
T Consensus       457 W~  458 (459)
T KOG0272|consen  457 WR  458 (459)
T ss_pred             cc
Confidence            94

>KOG0279|consensus

Probab=100.00  E-value=2.6e-33  Score=197.03  Aligned_cols=161  Identities=24%  Similarity=0.407  Sum_probs=146.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||+..|..+..++|+.+.++++.|+++++||+.+++..+.|.+|...|.+++|+|+...+++|++|++|++||...+
T Consensus        58 ~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~  137 (315)
T KOG0279|consen   58 RLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV  137 (315)
T ss_pred             eeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999998765


Q ss_pred             CeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ........ .+..=|+++.|+|+  ..++++++.|+++++||+...+....+.+|+..++.++++|||..+++|+.||.+
T Consensus       138 ck~t~~~~-~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~  216 (315)
T KOG0279|consen  138 CKYTIHED-SHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEA  216 (315)
T ss_pred             EEEEEecC-CCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceE
Confidence            44332222 11345899999998  6899999999999999999999999999999999999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      .+||
T Consensus       217 ~Lwd  220 (315)
T KOG0279|consen  217 MLWD  220 (315)
T ss_pred             EEEE
Confidence            9997

>KOG0263|consensus

Probab=100.00  E-value=5.7e-33  Score=216.90  Aligned_cols=160  Identities=31%  Similarity=0.557  Sum_probs=152.0

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ...||..+|++++|+|-|.+|+|||.|++.++|........+.+.+|-+.|.|+.|+|+.+++++||.|.++|+||+.++
T Consensus       488 ~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G  567 (707)
T KOG0263|consen  488 IYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG  567 (707)
T ss_pred             EecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCC
Confidence            45699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      ..++.|.  ++..+|.+++|+|.|++|++|+.|+.|.+||+..++++..+.+|.+.|.++.|+.+|..||+||.|.+|++
T Consensus       568 ~~VRiF~--GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~l  645 (707)
T KOG0263|consen  568 NSVRIFT--GHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRL  645 (707)
T ss_pred             cEEEEec--CCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEE
Confidence            8887763  35568999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       646 WD  647 (707)
T KOG0263|consen  646 WD  647 (707)
T ss_pred             EE
Confidence            97

>KOG0291|consensus

Probab=100.00  E-value=1.5e-31  Score=208.56  Aligned_cols=161  Identities=33%  Similarity=0.590  Sum_probs=148.1

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ...||...+++++++|||++++||+.||+||+||..++-|..+|..|++.|+.++|+..++.+++++.||+|+.||++.-
T Consensus       345 KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRY  424 (893)
T KOG0291|consen  345 KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRY  424 (893)
T ss_pred             eccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccc
Confidence            45799999999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCC-eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF-NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~-~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      ...+.+..+.+ ...++++..|.|.++.+|..|. .|++|++++++.+..+.+|+++|.+++|+|.+..|++||||.+||
T Consensus       425 rNfRTft~P~p-~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVR  503 (893)
T KOG0291|consen  425 RNFRTFTSPEP-IQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVR  503 (893)
T ss_pred             ceeeeecCCCc-eeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEE
Confidence            66666654433 3467899999999998888765 699999999999999999999999999999999999999999999


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      +||
T Consensus       504 iW~  506 (893)
T KOG0291|consen  504 IWD  506 (893)
T ss_pred             EEE
Confidence            997

>KOG0285|consensus

Probab=99.98  E-value=2.2e-31  Score=193.05  Aligned_cols=160  Identities=26%  Similarity=0.473  Sum_probs=148.8

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ++.||.+.|.|+++.|....|++|+.|++++|||+.++++.-++.||-..|..+++++-..++++++.|+.|+.||++..
T Consensus       146 Vi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~n  225 (460)
T KOG0285|consen  146 VISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYN  225 (460)
T ss_pred             hhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhh
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +.++.+  ..+..+|.+++.||....+++|+.|.++||||+++...+..+.+|.+.|..+.+.|-...+++||.|++|++
T Consensus       226 kvIR~Y--hGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrl  303 (460)
T KOG0285|consen  226 KVIRHY--HGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRL  303 (460)
T ss_pred             hhHHHh--ccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEE
Confidence            766543  233467999999999999999999999999999999999999999999999999887778899999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       304 WD  305 (460)
T KOG0285|consen  304 WD  305 (460)
T ss_pred             ee
Confidence            97

>KOG0266|consensus

Probab=99.97  E-value=1.4e-29  Score=197.89  Aligned_cols=159  Identities=31%  Similarity=0.579  Sum_probs=143.9

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEc-CCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDI-RDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~-~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +.||...|++++|+|+++++++++.|+++++||+ ..+.+++++++|...|++++|+|+++.+++|+.|++|++||++.+
T Consensus       199 l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~  278 (456)
T KOG0266|consen  199 LSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG  278 (456)
T ss_pred             ccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC
Confidence            4899999999999999999999999999999999 556899999999999999999999999999999999999999987


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce--eeeeecCCCcc--EEEEEEeCCCCEEEEccCCC
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE--RAGILAGHDNR--VSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~--~~~~~~~~~~~--i~~~~~~~~~~~l~tg~~d~  170 (176)
                      +....+..  +..+|+.++|++++..+++++.|+.+++||..++.  +...+.++...  +.++.|+|++.++++++.|+
T Consensus       279 ~~~~~l~~--hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~  356 (456)
T KOG0266|consen  279 ECVRKLKG--HSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDR  356 (456)
T ss_pred             eEEEeeec--cCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCC
Confidence            76665443  33578999999999999999999999999999888  45667666555  89999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      ++++||
T Consensus       357 ~~~~w~  362 (456)
T KOG0266|consen  357 TLKLWD  362 (456)
T ss_pred             eEEEEE
Confidence            999996

>KOG0315|consensus

Probab=99.97  E-value=9.3e-30  Score=176.93  Aligned_cols=161  Identities=26%  Similarity=0.462  Sum_probs=142.1

Q ss_pred             cccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         14 PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      ..+.||+..|+++.|..+|+.++||+.||++||||+++..+.+.|+ |.++|+++..+|+...|++|.++|.|++||++.
T Consensus        77 ~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~  155 (311)
T KOG0315|consen   77 ATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGE  155 (311)
T ss_pred             eEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccC
Confidence            3578999999999999999999999999999999999988888777 779999999999999999999999999999987


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc------eeeeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT------ERAGILAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      .......-.+.. ..+.+++..|||.+++++...|++++|++...      +++..++.|+..+...-++|++++||++|
T Consensus       156 ~~c~~~liPe~~-~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~s  234 (311)
T KOG0315|consen  156 NSCTHELIPEDD-TSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCS  234 (311)
T ss_pred             CccccccCCCCC-cceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeec
Confidence            755443323222 56889999999999999999999999997653      45667889999999999999999999999


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      .|.+++||+
T Consensus       235 sdktv~iwn  243 (311)
T KOG0315|consen  235 SDKTVKIWN  243 (311)
T ss_pred             CCceEEEEe
Confidence            999999995

>KOG0286|consensus

Probab=99.97  E-value=2.1e-29  Score=178.45  Aligned_cols=158  Identities=25%  Similarity=0.491  Sum_probs=142.2

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +.||++.+.|+.|-+ ...++|+|.|.+..+||+++++....|.+|.+.|.++.+.| +++.|++|+.|.+.++||+|++
T Consensus       141 l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~  219 (343)
T KOG0286|consen  141 LAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG  219 (343)
T ss_pred             ecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc
Confidence            789999999999977 55688999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC--CccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH--DNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      .....|.  .+...|+++.|+|+|.-+++|+.|+++|+||++....+..+...  ...|++++|+..|.+|..|..|.++
T Consensus       220 ~c~qtF~--ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c  297 (343)
T KOG0286|consen  220 QCVQTFE--GHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTC  297 (343)
T ss_pred             ceeEeec--ccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCce
Confidence            7766543  34467999999999999999999999999998877666666532  3478999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      .+||
T Consensus       298 ~vWD  301 (343)
T KOG0286|consen  298 NVWD  301 (343)
T ss_pred             eEee
Confidence            9997

>KOG0271|consensus

Probab=99.97  E-value=2.9e-29  Score=183.39  Aligned_cols=172  Identities=31%  Similarity=0.540  Sum_probs=146.5

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcC-----CCCEEEEEeCCCeEEEEEcCCCeeeeEec-----------------
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAP-----DMRTFVSGACDASAKLWDIRDGSCKQTFP-----------------   59 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~-----~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-----------------   59 (176)
                      +|+++++...++ .+.||...|++++|.|     +.++|++++.||+|+|||...++++..+.                 
T Consensus       183 lwdpktg~~~g~-~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gli  261 (480)
T KOG0271|consen  183 LWDPKTGQQIGR-ALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLI  261 (480)
T ss_pred             EecCCCCCcccc-cccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceE
Confidence            466777777665 6899999999999976     56788999999999999976655444332                 


Q ss_pred             --------------------------------------------------------------------------------
Q psy15417         60 --------------------------------------------------------------------------------   59 (176)
Q Consensus        60 --------------------------------------------------------------------------------   59 (176)
                                                                                                      
T Consensus       262 ySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVS  341 (480)
T KOG0271|consen  262 YSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVS  341 (480)
T ss_pred             EecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEE
Confidence                                                                                            


Q ss_pred             -----------------------CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC
Q psy15417         60 -----------------------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR  116 (176)
Q Consensus        60 -----------------------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~  116 (176)
                                             +|..-|+.+.|+||+++++++|.|..|++||.++++.+..+  ..+...|..++|+.
T Consensus       342 gsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasf--RGHv~~VYqvawsa  419 (480)
T KOG0271|consen  342 GSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASF--RGHVAAVYQVAWSA  419 (480)
T ss_pred             ecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhh--hhccceeEEEEecc
Confidence                                   57777888888898888999999989999988888776654  34456789999999


Q ss_pred             CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        117 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       117 ~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |.+++++|+.|.++++|++.+.+....+++|.+.|.++.|+|+|..+++|+.|..+++|.
T Consensus       420 DsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  420 DSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             CccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence            999999999999999999999999999999999999999999999999999999999993

>KOG0295|consensus

Probab=99.96  E-value=1.2e-28  Score=178.87  Aligned_cols=159  Identities=28%  Similarity=0.445  Sum_probs=141.3

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||+..|.++.|-|.+.++++++.|.+|+.||+.++-|+++|++|..-|..++...||..+++++.|.++++|-+.+.
T Consensus       188 s~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~  267 (406)
T KOG0295|consen  188 SLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATK  267 (406)
T ss_pred             HhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccc
Confidence            35689999999999999999999999999999999999999999999999999999999999999999999999998776


Q ss_pred             CeeeEE-eecceEeceEEEEECCC---------------CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC
Q psy15417         95 QELAMY-SHDNIICGITSVAFSRS---------------GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE  158 (176)
Q Consensus        95 ~~~~~~-~~~~~~~~v~~~~~~~~---------------~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~  158 (176)
                      +...++ .+++   ++-+++|-|.               ++++.+++.|++|++||+.++.++.++.+|.++|..++|+|
T Consensus       268 ~~k~~lR~hEh---~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p  344 (406)
T KOG0295|consen  268 QCKAELREHEH---PVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSP  344 (406)
T ss_pred             hhhhhhhcccc---ceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcC
Confidence            544332 2332   3344555332               35899999999999999999999999999999999999999


Q ss_pred             CCCEEEEccCCCcEEEeC
Q psy15417        159 DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       159 ~~~~l~tg~~d~~v~vwd  176 (176)
                      .|+||+++.+|+++++||
T Consensus       345 ~Gkyi~ScaDDktlrvwd  362 (406)
T KOG0295|consen  345 GGKYILSCADDKTLRVWD  362 (406)
T ss_pred             CCeEEEEEecCCcEEEEE
Confidence            999999999999999997

>PTZ00421 coronin; Provisional

Probab=99.96  E-value=1.3e-27  Score=187.31  Aligned_cols=160  Identities=17%  Similarity=0.290  Sum_probs=135.9

Q ss_pred             ccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC-------eeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCc
Q psy15417         15 AASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPNG-WAFATGSDDAT   85 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~   85 (176)
                      .+.||.+.|++++|+| ++.+|++|+.|++|++||+.++       +.+..+.+|...|.+++|+|++ +.|++++.|++
T Consensus        70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt  149 (493)
T PTZ00421         70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV  149 (493)
T ss_pred             eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence            3789999999999999 8889999999999999999765       3466889999999999999985 68999999999


Q ss_pred             EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCcc-EEEEEEeCCCCEEE
Q psy15417         86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR-VSCLGVTEDGMAVA  164 (176)
Q Consensus        86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~  164 (176)
                      |++||+++++....+.  .+...|.+++|+|++.++++++.|++|++||..+++.+..+.+|... ...+.|.+++..++
T Consensus       150 VrIWDl~tg~~~~~l~--~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~iv  227 (493)
T PTZ00421        150 VNVWDVERGKAVEVIK--CHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLII  227 (493)
T ss_pred             EEEEECCCCeEEEEEc--CCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEE
Confidence            9999998876554432  23346889999999999999999999999999988888888888764 44567888877776


Q ss_pred             Ecc----CCCcEEEeC
Q psy15417        165 TGS----WDSFLRIWN  176 (176)
Q Consensus       165 tg~----~d~~v~vwd  176 (176)
                      +++    .|+.|++||
T Consensus       228 t~G~s~s~Dr~VklWD  243 (493)
T PTZ00421        228 TLGCSKSQQRQIMLWD  243 (493)
T ss_pred             EEecCCCCCCeEEEEe
Confidence            654    478999997

>KOG0282|consensus

Probab=99.96  E-value=8.3e-30  Score=190.36  Aligned_cols=160  Identities=27%  Similarity=0.429  Sum_probs=149.8

Q ss_pred             cccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCC-CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         14 PAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      +.++||+..|+++.|.| .+.+|++++.|+.|+||++.. ++|+++|.+|..+|.+++|++.|..|+|+|.|+++++||.
T Consensus       208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDt  287 (503)
T KOG0282|consen  208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDT  287 (503)
T ss_pred             eeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeecc
Confidence            34689999999999999 889999999999999999976 8899999999999999999999999999999999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      ++++.+..+....   .+.++.|+|++ .++++|+.|+.|+-||+..++.+.+...|.+.|..+.|.+++..+++.++|+
T Consensus       288 ETG~~~~~f~~~~---~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdk  364 (503)
T KOG0282|consen  288 ETGQVLSRFHLDK---VPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDK  364 (503)
T ss_pred             ccceEEEEEecCC---CceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCc
Confidence            9999887776654   46789999998 7999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      +++||+
T Consensus       365 s~riWe  370 (503)
T KOG0282|consen  365 SVRIWE  370 (503)
T ss_pred             cEEEEE
Confidence            999995

>KOG0266|consensus

Probab=99.96  E-value=6.1e-28  Score=188.74  Aligned_cols=159  Identities=31%  Similarity=0.586  Sum_probs=143.1

Q ss_pred             cCCC-ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         16 ASGH-TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        16 ~~gh-~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      +.+| ...|.++.|+++|..+++++.++++++|+..+.+  ....+.+|...|+.++|+|++..+++++.|.++++||++
T Consensus       154 ~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~  233 (456)
T KOG0266|consen  154 LAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLK  233 (456)
T ss_pred             ecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeecc
Confidence            3344 6789999999999999999999999999997777  777888999999999999999999999999999999994


Q ss_pred             CC-CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         93 AD-QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        93 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      .. ..+..  ...+...+++++|+|+++.+++|+.|++|++||++++++...+.+|...|++++|.+++.+|++++.|+.
T Consensus       234 ~~~~~~~~--l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~  311 (456)
T KOG0266|consen  234 DDGRNLKT--LKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGT  311 (456)
T ss_pred             CCCeEEEE--ecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCcc
Confidence            43 33333  3345567899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      |+|||
T Consensus       312 i~vwd  316 (456)
T KOG0266|consen  312 IRVWD  316 (456)
T ss_pred             EEEEE
Confidence            99997

>KOG0276|consensus

Probab=99.96  E-value=2e-28  Score=188.14  Aligned_cols=160  Identities=29%  Similarity=0.496  Sum_probs=145.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-eeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+..|...|.|++.+|...+++|+|.|.+||+||.+.. .|.++|.||+--|..++|.|. .+.|++++.|++|++|.+.
T Consensus        92 ~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslg  171 (794)
T KOG0276|consen   92 TFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLG  171 (794)
T ss_pred             EeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcC
Confidence            57889999999999999999999999999999999865 688999999999999999995 6799999999999999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCC--cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSG--RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      ++.....  .+.+..+|+++.+-+.|  +++++|..|.+++|||..+..++.++.+|.+-|+.+.|+|.-..++|||.||
T Consensus       172 s~~~nfT--l~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDG  249 (794)
T KOG0276|consen  172 SPHPNFT--LEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDG  249 (794)
T ss_pred             CCCCcee--eeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCc
Confidence            7665433  44556789999997754  7999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      +||||+
T Consensus       250 TvriWh  255 (794)
T KOG0276|consen  250 TVRIWN  255 (794)
T ss_pred             cEEEec
Confidence            999995

>KOG0279|consensus

Probab=99.96  E-value=1.3e-27  Score=168.33  Aligned_cols=161  Identities=23%  Similarity=0.406  Sum_probs=138.9

Q ss_pred             CcccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcC-----CCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417         13 SPAASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIR-----DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~-----~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      ...+.||.+.|..++..+. ...+++++.|.++.+|++.     .|..++.|.||.-.|+.+..++++++++++++|+++
T Consensus         8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~l   87 (315)
T KOG0279|consen    8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTL   87 (315)
T ss_pred             eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceE
Confidence            3357899999999999875 6799999999999999985     466789999999999999999999999999999999


Q ss_pred             EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC--CccEEEEEEeCC--CCE
Q psy15417         87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH--DNRVSCLGVTED--GMA  162 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~--~~~  162 (176)
                      ++||+.+++....+  ..+...|.+++|+||.+.+++|+.|.+|++|+... .+..++..+  .++|+|+.|+|+  ..+
T Consensus        88 rlWDl~~g~~t~~f--~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g-~ck~t~~~~~~~~WVscvrfsP~~~~p~  164 (315)
T KOG0279|consen   88 RLWDLATGESTRRF--VGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG-VCKYTIHEDSHREWVSCVRFSPNESNPI  164 (315)
T ss_pred             EEEEecCCcEEEEE--EecCCceEEEEecCCCceeecCCCcceeeeeeecc-cEEEEEecCCCcCcEEEEEEcCCCCCcE
Confidence            99999988655443  34446799999999999999999999999999654 444444333  789999999998  688


Q ss_pred             EEEccCCCcEEEeC
Q psy15417        163 VATGSWDSFLRIWN  176 (176)
Q Consensus       163 l~tg~~d~~v~vwd  176 (176)
                      |+++|+|++||+||
T Consensus       165 Ivs~s~DktvKvWn  178 (315)
T KOG0279|consen  165 IVSASWDKTVKVWN  178 (315)
T ss_pred             EEEccCCceEEEEc
Confidence            99999999999997

>KOG0275|consensus

Probab=99.96  E-value=9.1e-30  Score=183.29  Aligned_cols=161  Identities=21%  Similarity=0.386  Sum_probs=147.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--------CCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--------GHESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--------~h~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      ...|....+.|..|+||+++|++||.||.+.+||.-+|+....++        .+..+|.+++|+.|...+++|+.||.|
T Consensus       208 IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkI  287 (508)
T KOG0275|consen  208 IKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKI  287 (508)
T ss_pred             eecccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcE
Confidence            456788899999999999999999999999999999998655443        478899999999999999999999999


Q ss_pred             EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      ++|.+++++.++.|...+ ..+|+++.|+.|+..+++++.|.++++.-++.++++..+.+|...|+...|+++|..++++
T Consensus       288 KvWri~tG~ClRrFdrAH-tkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisa  366 (508)
T KOG0275|consen  288 KVWRIETGQCLRRFDRAH-TKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISA  366 (508)
T ss_pred             EEEEEecchHHHHhhhhh-ccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEe
Confidence            999999999988776443 3579999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCcEEEeC
Q psy15417        167 SWDSFLRIWN  176 (176)
Q Consensus       167 ~~d~~v~vwd  176 (176)
                      +.||+|+||+
T Consensus       367 SsDgtvkvW~  376 (508)
T KOG0275|consen  367 SSDGTVKVWH  376 (508)
T ss_pred             cCCccEEEec
Confidence            9999999996

>KOG0645|consensus

Probab=99.96  E-value=6.1e-27  Score=164.46  Aligned_cols=160  Identities=27%  Similarity=0.430  Sum_probs=140.2

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG--SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      ..+|...|..++|+|.|++|++||.|.++.||.-..+  +++.++.||...|-+++|+++|++|+++++|..+-+|.+..
T Consensus        57 d~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~de  136 (312)
T KOG0645|consen   57 DDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDE  136 (312)
T ss_pred             cccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecC
Confidence            4589999999999999999999999999999986544  68899999999999999999999999999999999999875


Q ss_pred             CCeeeEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC---CceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         94 DQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM---KTERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        94 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      +.+.... ..+.+...|-.+.|||...+|++++.|.+|++|.-+   ..++..++.+|.+.|.+++|.+.|..|+++++|
T Consensus       137 ddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD  216 (312)
T KOG0645|consen  137 DDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDD  216 (312)
T ss_pred             CCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCC
Confidence            5443222 233333456778999999999999999999999755   346888999999999999999999999999999


Q ss_pred             CcEEEe
Q psy15417        170 SFLRIW  175 (176)
Q Consensus       170 ~~v~vw  175 (176)
                      ++++||
T Consensus       217 ~tv~Iw  222 (312)
T KOG0645|consen  217 GTVSIW  222 (312)
T ss_pred             cceEee
Confidence            999999

>KOG0319|consensus

Probab=99.96  E-value=5.3e-28  Score=188.32  Aligned_cols=157  Identities=25%  Similarity=0.400  Sum_probs=148.0

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      ..|...|+|++++|+.++++|||.|++.++|+++.++...++.+|+..|.+|.|+|....++++|.|.+|+||.+.+...
T Consensus       460 ~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSC  539 (775)
T KOG0319|consen  460 RAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSC  539 (775)
T ss_pred             HhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecccee
Confidence            46999999999999999999999999999999999999999999999999999999999999999999999999988777


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      +..++  ++.+.|..+.|-.++..|++++.||.+++|++.+.+++.++.+|+++|++++.++...+++||+.|+.|.+|
T Consensus       540 lkT~e--GH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~w  616 (775)
T KOG0319|consen  540 LKTFE--GHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFW  616 (775)
T ss_pred             eeeec--CccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEe
Confidence            76643  444678889999999999999999999999999999999999999999999999999999999999999999

>PTZ00420 coronin; Provisional

Probab=99.96  E-value=1.2e-26  Score=183.29  Aligned_cols=159  Identities=19%  Similarity=0.362  Sum_probs=133.3

Q ss_pred             ccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCe--------eeeEecCCCCCeeEEEEccCCcE-EEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGS--------CKQTFPGHESDINAVTFFPNGWA-FATGSDDA   84 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~--------~~~~~~~h~~~v~~v~~~~~~~~-l~s~s~d~   84 (176)
                      .+.||.+.|.+++|+|+ +.+|++|+.|++|++||+.++.        ....+.+|...|.+++|+|++.. +++++.|+
T Consensus        69 ~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dg  148 (568)
T PTZ00420         69 KLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDS  148 (568)
T ss_pred             EEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCC
Confidence            47899999999999996 7899999999999999997642        34467889999999999998865 57999999


Q ss_pred             cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEE-----EEEeCC
Q psy15417         85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC-----LGVTED  159 (176)
Q Consensus        85 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~-----~~~~~~  159 (176)
                      +|++||+++++......+.   ..+.++.|+|+|.+|++++.|+++++||+.+++.+..+.+|.+.+..     ..|+++
T Consensus       149 tIrIWDl~tg~~~~~i~~~---~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d  225 (568)
T PTZ00420        149 FVNIWDIENEKRAFQINMP---KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGD  225 (568)
T ss_pred             eEEEEECCCCcEEEEEecC---CcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCC
Confidence            9999999987765444332   35889999999999999999999999999999888888899775432     345688


Q ss_pred             CCEEEEccCCC----cEEEeC
Q psy15417        160 GMAVATGSWDS----FLRIWN  176 (176)
Q Consensus       160 ~~~l~tg~~d~----~v~vwd  176 (176)
                      +.+|++++.|+    +|+|||
T Consensus       226 ~~~IlTtG~d~~~~R~VkLWD  246 (568)
T PTZ00420        226 DNYILSTGFSKNNMREMKLWD  246 (568)
T ss_pred             CCEEEEEEcCCCCccEEEEEE
Confidence            88998887764    799997

>KOG0273|consensus

Probab=99.96  E-value=3.6e-27  Score=176.00  Aligned_cols=165  Identities=27%  Similarity=0.467  Sum_probs=137.4

Q ss_pred             cccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-------------------------------
Q psy15417          8 SALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-------------------------------   56 (176)
Q Consensus         8 ~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-------------------------------   56 (176)
                      +++..  .+.-|.++|.++.|+..|.++++++.|+++.+||..+++...                               
T Consensus       266 G~l~~--tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V  343 (524)
T KOG0273|consen  266 GNLIS--TLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHV  343 (524)
T ss_pred             chhhh--hhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEE
Confidence            44544  345599999999999999999999999999999986654332                               


Q ss_pred             ----------EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCC--------
Q psy15417         57 ----------TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG--------  118 (176)
Q Consensus        57 ----------~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------  118 (176)
                                ++.+|.++|+++.|.|.+.+|+++|.|++++||++........  ...+...|..+.|+|.+        
T Consensus       344 ~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~--l~~Hskei~t~~wsp~g~v~~n~~~  421 (524)
T KOG0273|consen  344 CKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHD--LQAHSKEIYTIKWSPTGPVTSNPNM  421 (524)
T ss_pred             EEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhh--hhhhccceeeEeecCCCCccCCCcC
Confidence                      3458999999999999999999999999999999765433211  11122345666777654        


Q ss_pred             -cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        119 -RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       119 -~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                       ..+++++.|+++++||++++.++..+..|..+|.+++|+|+|.++|+|+.|+.|.+|+
T Consensus       422 ~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws  480 (524)
T KOG0273|consen  422 NLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWS  480 (524)
T ss_pred             CceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecc
Confidence             4688999999999999999999999999999999999999999999999999999995

>KOG0284|consensus

Probab=99.96  E-value=1.7e-28  Score=180.30  Aligned_cols=159  Identities=24%  Similarity=0.351  Sum_probs=140.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +..|..+|.++.|++++..+++|+.+|.||+|+.+-+........|...|++++|+|+...|+++|+|++|+|||.....
T Consensus       134 lQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k  213 (464)
T KOG0284|consen  134 LQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK  213 (464)
T ss_pred             hhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc
Confidence            46899999999999999999999999999999998765444444455899999999999999999999999999987655


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      +....  ..+--.|.+++|||....+++|+.|..+++||-+++.++.++.+|.+.|..+.|.|++++|+|+|.|..+++|
T Consensus       214 ee~vL--~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~  291 (464)
T KOG0284|consen  214 EERVL--RGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVF  291 (464)
T ss_pred             hhhee--ccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEE
Confidence            43333  2222457899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       292 D  292 (464)
T KOG0284|consen  292 D  292 (464)
T ss_pred             e
Confidence            7

>KOG0284|consensus

Probab=99.95  E-value=1.5e-27  Score=175.38  Aligned_cols=158  Identities=26%  Similarity=0.442  Sum_probs=141.3

Q ss_pred             cCCCc-cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHT-GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~-~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +.+|. +.|.+++|+|+...|++||.||+|+|||....+....+.+|...|.+++|+|...+++++|.|..|++||.+++
T Consensus       175 ~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg  254 (464)
T KOG0284|consen  175 IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG  254 (464)
T ss_pred             hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCc
Confidence            34555 89999999999999999999999999999998888889999999999999999999999999999999999999


Q ss_pred             CeeeEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC-CCEEEEccCCCcE
Q psy15417         95 QELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED-GMAVATGSWDSFL  172 (176)
Q Consensus        95 ~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~tg~~d~~v  172 (176)
                      +++... .+.   ..|..+.|+|++++|++++.|..++++|+..-+-+..+++|...+.+++|+|- ...|.+|++||.|
T Consensus       255 ~cl~tlh~HK---ntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsv  331 (464)
T KOG0284|consen  255 SCLATLHGHK---NTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSV  331 (464)
T ss_pred             chhhhhhhcc---ceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCce
Confidence            887643 333   35889999999999999999999999998766667788899999999999985 4678899999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ..|.
T Consensus       332 vh~~  335 (464)
T KOG0284|consen  332 VHWV  335 (464)
T ss_pred             EEEe
Confidence            9884

>KOG0640|consensus

Probab=99.95  E-value=1.1e-26  Score=166.31  Aligned_cols=162  Identities=23%  Similarity=0.371  Sum_probs=137.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC------------C------eeeeEecCCCCCeeEEEEccCCcE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD------------G------SCKQTFPGHESDINAVTFFPNGWA   76 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~------------~------~~~~~~~~h~~~v~~v~~~~~~~~   76 (176)
                      .++.|.+++.+.+|++||.++++|+.|..||+.|++.            +      -.++++-.|..+|+.+.|+|....
T Consensus       107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~I  186 (430)
T KOG0640|consen  107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETI  186 (430)
T ss_pred             EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhhe
Confidence            3567999999999999999999999999999999861            1      146678889999999999999999


Q ss_pred             EEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee---cCCCccEEE
Q psy15417         77 FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL---AGHDNRVSC  153 (176)
Q Consensus        77 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~---~~~~~~i~~  153 (176)
                      |++++.|++++++|.........+.......++.++.|||.|.++++|..+.++++||+.+.++....   .+|.+.|.+
T Consensus       187 LiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~  266 (430)
T KOG0640|consen  187 LISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQ  266 (430)
T ss_pred             EEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeE
Confidence            99999999999999865433222222222346889999999999999999999999999988765543   467889999


Q ss_pred             EEEeCCCCEEEEccCCCcEEEeC
Q psy15417        154 LGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       154 ~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.+++.+...+||+.||.||+||
T Consensus       267 V~Ys~t~~lYvTaSkDG~IklwD  289 (430)
T KOG0640|consen  267 VRYSSTGSLYVTASKDGAIKLWD  289 (430)
T ss_pred             EEecCCccEEEEeccCCcEEeec
Confidence            99999999999999999999998

>KOG0289|consensus

Probab=99.95  E-value=6.1e-26  Score=168.14  Aligned_cols=162  Identities=23%  Similarity=0.425  Sum_probs=150.5

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||...|..+.|+|+...+++++.|..+++|......+......|..+|+.+..+|.|.+|++++.|++.-+.|++++
T Consensus       256 ~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g  335 (506)
T KOG0289|consen  256 TLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSG  335 (506)
T ss_pred             hccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCC
Confidence            46899999999999999999999999999999999887777788889999999999999999999999999999999999


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      ..+.....+.....+++..|||||.+|.+|..|+.+++||+..+.....+++|.++|..++|+.+|=+||++++|+.|++
T Consensus       336 ~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~l  415 (506)
T KOG0289|consen  336 SQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKL  415 (506)
T ss_pred             cEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEE
Confidence            88777665544456889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       416 wD  417 (506)
T KOG0289|consen  416 WD  417 (506)
T ss_pred             EE
Confidence            98

>KOG0265|consensus

Probab=99.94  E-value=6.4e-26  Score=161.27  Aligned_cols=162  Identities=22%  Similarity=0.405  Sum_probs=135.2

Q ss_pred             CCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR-DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        12 ~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      ..+.++||++.|+.+.|+|+|.+|+||+.|..|.+|++. ..+-...+++|.+.|..+.|.++++.++++|.|.+++.||
T Consensus        39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD  118 (338)
T KOG0265|consen   39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWD  118 (338)
T ss_pred             hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEe
Confidence            344589999999999999999999999999999999963 3444667889999999999999999999999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      +++++....+.  .+..-++++.-...| .++.+|+.|+++++||+++.+.+.++.. ..++.+++|.+++..+.+|+-|
T Consensus       119 ~~tG~~~rk~k--~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~-kyqltAv~f~d~s~qv~sggId  195 (338)
T KOG0265|consen  119 AETGKRIRKHK--GHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN-KYQLTAVGFKDTSDQVISGGID  195 (338)
T ss_pred             cccceeeehhc--cccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc-ceeEEEEEecccccceeecccc
Confidence            99988766543  232346666533334 4667799999999999988877776643 3467899999999999999999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      +.|++||
T Consensus       196 n~ikvWd  202 (338)
T KOG0265|consen  196 NDIKVWD  202 (338)
T ss_pred             Cceeeec
Confidence            9999997

>KOG0277|consensus

Probab=99.94  E-value=2.5e-26  Score=160.28  Aligned_cols=161  Identities=28%  Similarity=0.396  Sum_probs=138.2

Q ss_pred             cccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeC
Q psy15417         14 PAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDI   91 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~   91 (176)
                      ..+..|...|.+++|++ ..+.++++|.|++||+|+....+.++++.+|...|...+|+|. ++.|+++|.|+++++||+
T Consensus        98 ~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdv  177 (311)
T KOG0277|consen   98 HKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDV  177 (311)
T ss_pred             hHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEe
Confidence            34678999999999988 5678899999999999999999999999999999999999995 789999999999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCCC-CEEEEccC
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTEDG-MAVATGSW  168 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~~  168 (176)
                      +.......++.  +...+.++.|+. +..++++|+.|+.|+.||+.. ..++..+.+|.-.|..+.|+|.. ..||+++.
T Consensus       178 r~~gk~~~i~a--h~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasY  255 (311)
T KOG0277|consen  178 RSPGKFMSIEA--HNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASY  255 (311)
T ss_pred             cCCCceeEEEe--ccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccc
Confidence            87543333332  224678888887 457889999999999999876 35677889999999999999974 67899999


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      |=++||||
T Consensus       256 DmT~riw~  263 (311)
T KOG0277|consen  256 DMTVRIWD  263 (311)
T ss_pred             cceEEecc
Confidence            99999997

>KOG0283|consensus

Probab=99.94  E-value=2.5e-26  Score=180.98  Aligned_cols=154  Identities=21%  Similarity=0.418  Sum_probs=133.6

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--------------------------------C-------------
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD--------------------------------G-------------   52 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~--------------------------------~-------------   52 (176)
                      +|.+.|+++.||+||++||+|+.|+.|+||.+..                                .             
T Consensus       265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~  344 (712)
T KOG0283|consen  265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ  344 (712)
T ss_pred             ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence            8999999999999999999999999999998755                                0             


Q ss_pred             ---------------eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC-
Q psy15417         53 ---------------SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR-  116 (176)
Q Consensus        53 ---------------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-  116 (176)
                                     +..+.|.||.+.|..+.|+.++ .|+++|-|.++|+|.+...+.+..|.|...   |+||+|+| 
T Consensus       345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~Hndf---VTcVaFnPv  420 (712)
T KOG0283|consen  345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFSHNDF---VTCVAFNPV  420 (712)
T ss_pred             CccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEecCCe---eEEEEeccc
Confidence                           1122456899999999999766 899999999999999999999999988764   78999999 


Q ss_pred             CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        117 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       117 ~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |.++|++|+.|+.+|||++...+...-...+ .-|++++|.|+|++.+.|+-+|.+++|+
T Consensus       421 DDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~-~lITAvcy~PdGk~avIGt~~G~C~fY~  479 (712)
T KOG0283|consen  421 DDRYFISGSLDGKVRLWSISDKKVVDWNDLR-DLITAVCYSPDGKGAVIGTFNGYCRFYD  479 (712)
T ss_pred             CCCcEeecccccceEEeecCcCeeEeehhhh-hhheeEEeccCCceEEEEEeccEEEEEE
Confidence            5689999999999999998776655544333 7799999999999999999999999985

>KOG0265|consensus

Probab=99.94  E-value=6.4e-26  Score=161.27  Aligned_cols=159  Identities=28%  Similarity=0.486  Sum_probs=143.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.||++.|+.+.|.+|+..+++++.|++++.||+++|++.+.+++|..-|++++-..-| ..+.+++.|+++++||+|+
T Consensus        85 ~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~  164 (338)
T KOG0265|consen   85 VLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK  164 (338)
T ss_pred             eeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecc
Confidence            456999999999999999999999999999999999999999999999999999844333 5688899999999999998


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      .+.+..++.+   ..++++.|..++..+++|+=|+.|++||+.+.+....+.+|.+.|..+..+++|.++.+-+-|.+++
T Consensus       165 k~~~~t~~~k---yqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvr  241 (338)
T KOG0265|consen  165 KEAIKTFENK---YQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVR  241 (338)
T ss_pred             cchhhccccc---eeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEE
Confidence            7666554322   3578899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      +||
T Consensus       242 vwd  244 (338)
T KOG0265|consen  242 VWD  244 (338)
T ss_pred             EEE
Confidence            997

>KOG0645|consensus

Probab=99.94  E-value=7.3e-25  Score=154.07  Aligned_cols=167  Identities=22%  Similarity=0.358  Sum_probs=141.2

Q ss_pred             cCCCcccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCC---eeeeEe-cCCCCCeeEEEEccCCcEEEEeeCCC
Q psy15417         10 LLGSPAASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDG---SCKQTF-PGHESDINAVTFFPNGWAFATGSDDA   84 (176)
Q Consensus        10 ~~~~~~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~---~~~~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~   84 (176)
                      ++.-..++||.+.+..++|+|. |..|++|+.|+.|++|+..++   .|...+ .+|+..|++++|+|.|++|+++|.|.
T Consensus         4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~   83 (312)
T KOG0645|consen    4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA   83 (312)
T ss_pred             ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence            4444568899999999999998 889999999999999998853   344444 36999999999999999999999999


Q ss_pred             cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC---ceeeeeecCCCccEEEEEEeCCCC
Q psy15417         85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK---TERAGILAGHDNRVSCLGVTEDGM  161 (176)
Q Consensus        85 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~  161 (176)
                      ++.||.-..++-...-..+.+...|-+++|+++|.+|++++.|+.+=||....   .++...+..|...|-.+.|+|...
T Consensus        84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d  163 (312)
T KOG0645|consen   84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED  163 (312)
T ss_pred             eEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc
Confidence            99999754443222233445556788999999999999999999999998653   467888999999999999999999


Q ss_pred             EEEEccCCCcEEEeC
Q psy15417        162 AVATGSWDSFLRIWN  176 (176)
Q Consensus       162 ~l~tg~~d~~v~vwd  176 (176)
                      .|+++|.|.+||+|+
T Consensus       164 lL~S~SYDnTIk~~~  178 (312)
T KOG0645|consen  164 LLFSCSYDNTIKVYR  178 (312)
T ss_pred             eeEEeccCCeEEEEe
Confidence            999999999999994

>KOG0296|consensus

Probab=99.94  E-value=4.1e-25  Score=160.60  Aligned_cols=162  Identities=25%  Similarity=0.433  Sum_probs=147.5

Q ss_pred             CcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         13 SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+..|...|.+++.+|+..+++||+.|-.-.+|+..+++....+.+|+.+|+++.|+.++.+|++|..+|.+++|...
T Consensus        57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~s  136 (399)
T KOG0296|consen   57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS  136 (399)
T ss_pred             eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcc
Confidence            34578999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ++......  ......+--+.|||.+.+|++|+.||.+-+|.+..+.....+.+|+.++++-.|.|+|+.+++|..|++|
T Consensus       137 tg~~~~~~--~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti  214 (399)
T KOG0296|consen  137 TGGEQWKL--DQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTI  214 (399)
T ss_pred             cCceEEEe--ecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceE
Confidence            76554332  2223457789999999999999999999999998888888999999999999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       215 ~~Wn  218 (399)
T KOG0296|consen  215 IVWN  218 (399)
T ss_pred             EEEe
Confidence            9997

>KOG0643|consensus

Probab=99.94  E-value=5.6e-25  Score=154.52  Aligned_cols=165  Identities=21%  Similarity=0.318  Sum_probs=145.5

Q ss_pred             CCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        12 ~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      ++..+.||+.+++.+.|+.+|.+|++|+.|.+..+|-..+|+.+-++.+|++.|.++...-+.+++++|+.|.++++||.
T Consensus         2 rpi~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv   81 (327)
T KOG0643|consen    2 RPILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDV   81 (327)
T ss_pred             CccccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEc
Confidence            44567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCeeeEEeecceE---------------------------------------------------eceEEEEECCCCcE
Q psy15417         92 RADQELAMYSHDNII---------------------------------------------------CGITSVAFSRSGRL  120 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~---------------------------------------------------~~v~~~~~~~~~~~  120 (176)
                      ++++++..+......                                                   ..++...|.|-+..
T Consensus        82 ~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~  161 (327)
T KOG0643|consen   82 ETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGET  161 (327)
T ss_pred             CCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCE
Confidence            988776555432110                                                   12567779999999


Q ss_pred             EEEEcCCCeEEEEeCCCce-eeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        121 LLAGYDDFNCNVWDSMKTE-RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       121 l~~g~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++|..+|.|..||+++++ .+.....|...|+.+.++++..+++|+|.|.+-++||
T Consensus       162 ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D  218 (327)
T KOG0643|consen  162 IIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVD  218 (327)
T ss_pred             EEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeee
Confidence            9999999999999999874 4555577889999999999999999999999999997

>KOG0285|consensus

Probab=99.94  E-value=4.8e-26  Score=165.48  Aligned_cols=170  Identities=21%  Similarity=0.322  Sum_probs=149.2

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS   81 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s   81 (176)
                      ||+++++.+..  .++||-+.|..+++|+-..++++++.|+.|+.||+..++.++.+.||-+.|.+++.+|.-..+++|+
T Consensus       177 IwDlatg~Lkl--tltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~g  254 (460)
T KOG0285|consen  177 IWDLATGQLKL--TLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGG  254 (460)
T ss_pred             EEEcccCeEEE--eecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecC
Confidence            34555555533  5789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC
Q psy15417         82 DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM  161 (176)
Q Consensus        82 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  161 (176)
                      +|.++++||+|+...+...  ..+..+|.++.+.|-...+++|+.|++|++||+..++.+.++..|...+.+++..|...
T Consensus       255 rDst~RvWDiRtr~~V~~l--~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~  332 (460)
T KOG0285|consen  255 RDSTIRVWDIRTRASVHVL--SGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKEN  332 (460)
T ss_pred             CcceEEEeeecccceEEEe--cCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchh
Confidence            9999999999987666543  23334678888888888999999999999999999999999999999999999999998


Q ss_pred             EEEEccCCCcEEEeC
Q psy15417        162 AVATGSWDSFLRIWN  176 (176)
Q Consensus       162 ~l~tg~~d~~v~vwd  176 (176)
                      .+|+++.| .++-|+
T Consensus       333 ~fASas~d-nik~w~  346 (460)
T KOG0285|consen  333 LFASASPD-NIKQWK  346 (460)
T ss_pred             hhhccCCc-cceecc
Confidence            99999988 566563

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.94  E-value=2.8e-24  Score=156.03  Aligned_cols=160  Identities=31%  Similarity=0.554  Sum_probs=141.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|.++|.+++|+|++.++++++.||.+++|++.+++....+..|..++..+.|.|+++.+++++.|+.+++|++.+.
T Consensus         4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~   83 (289)
T cd00200           4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG   83 (289)
T ss_pred             HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc
Confidence            45689999999999999999999999999999999998888888999999999999999999999999999999999876


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +....+.  .+...+.++.|+|++.+++++..++.+++||+...+....+..|...+.+++|+|++.++++++.|+.+++
T Consensus        84 ~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i  161 (289)
T cd00200          84 ECVRTLT--GHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKL  161 (289)
T ss_pred             cceEEEe--ccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEE
Confidence            5544433  22236888999999888888888999999999888888888889899999999999999999888999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       162 ~d  163 (289)
T cd00200         162 WD  163 (289)
T ss_pred             EE
Confidence            96

>KOG0315|consensus

Probab=99.94  E-value=1.4e-24  Score=151.28  Aligned_cols=161  Identities=21%  Similarity=0.419  Sum_probs=139.3

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe-cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF-PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +..|..+|+++..+|+...|++|..+|.|++||+.+..+...+ +....+|.++...|+|..++.+..-|...+|++-..
T Consensus       120 ~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~  199 (311)
T KOG0315|consen  120 NYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNH  199 (311)
T ss_pred             hccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCC
Confidence            4568899999999999999999999999999999988766554 455688999999999999999999999999998765


Q ss_pred             CeeeEEe----ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         95 QELAMYS----HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        95 ~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      +....+.    ++.+...+..+.++|++++|++++.|.+++||+.+.. +....+.+|+.+++..+|+.+|.||+||+.|
T Consensus       200 ~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd  279 (311)
T KOG0315|consen  200 QTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSD  279 (311)
T ss_pred             CccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCC
Confidence            4433222    2333445778899999999999999999999998876 6677788999999999999999999999999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      +++|+|+
T Consensus       280 ~~~rlW~  286 (311)
T KOG0315|consen  280 HTARLWD  286 (311)
T ss_pred             Cceeecc
Confidence            9999996

>KOG0281|consensus

Probab=99.94  E-value=1.7e-26  Score=167.62  Aligned_cols=157  Identities=24%  Similarity=0.453  Sum_probs=126.6

Q ss_pred             CCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        12 ~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      ....+.||++.|.|++|.  .+.+++||.|.+|++||+++++++.++-+|...|..+.|+  ..+++++|.|+++.+||+
T Consensus       229 c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm  304 (499)
T KOG0281|consen  229 CLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDM  304 (499)
T ss_pred             HHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEec
Confidence            344578999999999985  5699999999999999999999999999999999999995  458999999999999999


Q ss_pred             CCCCeeeEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         92 RADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        92 ~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      .++..+... ...++...|+.+.|+  .+++++++.|.+|++|+..+.+.+.++.+|...|-|+.+  .+.++++||.|.
T Consensus       305 ~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDn  380 (499)
T KOG0281|consen  305 ASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN  380 (499)
T ss_pred             cCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCc
Confidence            776433211 122333467777774  458888888888888888888888888888888877665  467788888888


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      +||+||
T Consensus       381 tIRlwd  386 (499)
T KOG0281|consen  381 TIRLWD  386 (499)
T ss_pred             eEEEEe
Confidence            888886

>KOG0267|consensus

Probab=99.94  E-value=5.2e-27  Score=182.67  Aligned_cols=160  Identities=26%  Similarity=0.496  Sum_probs=147.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ++.||+.+|.++.|+++..++++|+.+|+||+||+...+..+++.+|..++.+++|+|.+.++++++.|+.+++||++..
T Consensus        65 S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~  144 (825)
T KOG0267|consen   65 SLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKK  144 (825)
T ss_pred             eeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhcc
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999855


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      -....+  ..+...+..+.|+|+|.+++.|++|.+++|||+..++....+..|..++..+.|+|..-.+++||.|+++++
T Consensus       145 Gc~~~~--~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f  222 (825)
T KOG0267|consen  145 GCSHTY--KSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRF  222 (825)
T ss_pred             Cceeee--cCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeee
Confidence            444433  334556888999999999999999999999999999999999999999999999999889999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       223 ~d  224 (825)
T KOG0267|consen  223 WD  224 (825)
T ss_pred             ec
Confidence            97

>KOG0319|consensus

Probab=99.94  E-value=1.5e-25  Score=174.81  Aligned_cols=165  Identities=28%  Similarity=0.446  Sum_probs=143.5

Q ss_pred             cCCCcccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCe---------eeeEecCCCCCeeEEEEccCCcEEEE
Q psy15417         10 LLGSPAASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGS---------CKQTFPGHESDINAVTFFPNGWAFAT   79 (176)
Q Consensus        10 ~~~~~~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~---------~~~~~~~h~~~v~~v~~~~~~~~l~s   79 (176)
                      .+......||++.|.+++++..+ ..|+++|.|+++|+|++...+         +..+...|...|+++++.|+.+++++
T Consensus       401 ~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT  480 (775)
T KOG0319|consen  401 SLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIAT  480 (775)
T ss_pred             hhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEe
Confidence            34444568999999999997754 589999999999999997621         22244569999999999999999999


Q ss_pred             eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC
Q psy15417         80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED  159 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~  159 (176)
                      ||.|.+.++|+++.......  ..++..++-++.|+|....+++++.|++++||.+.+..++.++.+|...|..+.|..+
T Consensus       481 ~SqDktaKiW~le~~~l~~v--LsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~  558 (775)
T KOG0319|consen  481 GSQDKTAKIWDLEQLRLLGV--LSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRN  558 (775)
T ss_pred             cccccceeeecccCceEEEE--eeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeC
Confidence            99999999999985544433  4455578999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEccCCCcEEEeC
Q psy15417        160 GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       160 ~~~l~tg~~d~~v~vwd  176 (176)
                      +..|++|+.||-+|+||
T Consensus       559 ~~qliS~~adGliKlWn  575 (775)
T KOG0319|consen  559 GKQLISAGADGLIKLWN  575 (775)
T ss_pred             CcEEEeccCCCcEEEEe
Confidence            99999999999999996

>KOG0292|consensus

Probab=99.94  E-value=6.9e-26  Score=179.96  Aligned_cols=159  Identities=21%  Similarity=0.424  Sum_probs=144.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +...+..|..++|+|....++++-..|.|++||.+.+.++..|.+|.+||++++|||....|+||++|-.|++|+.++..
T Consensus         5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr   84 (1202)
T KOG0292|consen    5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR   84 (1202)
T ss_pred             hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce
Confidence            34456788999999999999999999999999999999999999999999999999999999999999999999998655


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      .+  +....+..-|-.+.||+.-+++++++.|.+|+||+..++.++..+.+|+-.|.|..|+|....++++|-|++||||
T Consensus        85 cl--ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVW  162 (1202)
T KOG0292|consen   85 CL--FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVW  162 (1202)
T ss_pred             eh--hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEE
Confidence            43  2333333456788999999999999999999999999999999999999999999999998999999999999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       163 D  163 (1202)
T KOG0292|consen  163 D  163 (1202)
T ss_pred             e
Confidence            8

>KOG0292|consensus

Probab=99.94  E-value=2.5e-25  Score=176.81  Aligned_cols=173  Identities=20%  Similarity=0.300  Sum_probs=150.1

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS   81 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s   81 (176)
                      +||+++++.  .+.+.||-..|..+.|++.-..++++|.|.+|++|+..+++|+..+.||.--|.|.+|+|....++|+|
T Consensus        77 VWnYk~rrc--lftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaS  154 (1202)
T KOG0292|consen   77 VWNYKTRRC--LFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSAS  154 (1202)
T ss_pred             EEeccccee--hhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEec
Confidence            577766554  446899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCC---------------------------CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEe
Q psy15417         82 DDATCRLFDIRAD---------------------------QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD  134 (176)
Q Consensus        82 ~d~~i~iwd~~~~---------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d  134 (176)
                      .|.+||+||+..-                           ..+.++..+++..+|+.++|||..+++++|+.|+.+++|-
T Consensus       155 LDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWr  234 (1202)
T KOG0292|consen  155 LDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR  234 (1202)
T ss_pred             ccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEE
Confidence            9999999997421                           1122333455667899999999999999999999999998


Q ss_pred             CCCc--eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        135 SMKT--ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       135 ~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ....  .-..++.+|.+.|+++-|+|..+.|.+.|.|++|||||
T Consensus       235 mnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwD  278 (1202)
T KOG0292|consen  235 MNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWD  278 (1202)
T ss_pred             eccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEe
Confidence            5433  34557889999999999999999999999999999997

>KOG0313|consensus

Probab=99.94  E-value=2.8e-25  Score=162.19  Aligned_cols=156  Identities=23%  Similarity=0.413  Sum_probs=133.6

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-------------------------CeeeeEecCCCCCeeEEEEc
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-------------------------GSCKQTFPGHESDINAVTFF   71 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-------------------------~~~~~~~~~h~~~v~~v~~~   71 (176)
                      .||...|-+++..+++.++++||.|..+++|+..+                         +..+.++.||..+|.++.|.
T Consensus       190 ~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~  269 (423)
T KOG0313|consen  190 RGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWS  269 (423)
T ss_pred             cccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEc
Confidence            49999999999999999999999999999999321                         12455788999999999999


Q ss_pred             cCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc---eeeeeecCCC
Q psy15417         72 PNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT---ERAGILAGHD  148 (176)
Q Consensus        72 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~---~~~~~~~~~~  148 (176)
                      + ...++++|+|++|+.||+..+.........   ..++++.++|....+++|+.|..+++||-+++   .....+.+|.
T Consensus       270 d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~---ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~  345 (423)
T KOG0313|consen  270 D-ATVIYSVSWDHTIKVWDLETGGLKSTLTTN---KSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHK  345 (423)
T ss_pred             C-CCceEeecccceEEEEEeecccceeeeecC---cceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecch
Confidence            8 668999999999999999988765443322   35789999999999999999999999997654   3455788999


Q ss_pred             ccEEEEEEeCCCCE-EEEccCCCcEEEeC
Q psy15417        149 NRVSCLGVTEDGMA-VATGSWDSFLRIWN  176 (176)
Q Consensus       149 ~~i~~~~~~~~~~~-l~tg~~d~~v~vwd  176 (176)
                      ++|.++.++|...+ |++|+.|+++++||
T Consensus       346 nwVssvkwsp~~~~~~~S~S~D~t~klWD  374 (423)
T KOG0313|consen  346 NWVSSVKWSPTNEFQLVSGSYDNTVKLWD  374 (423)
T ss_pred             hhhhheecCCCCceEEEEEecCCeEEEEE
Confidence            99999999997654 78999999999997

>KOG0316|consensus

Probab=99.94  E-value=3.9e-25  Score=153.02  Aligned_cols=168  Identities=26%  Similarity=0.400  Sum_probs=142.4

Q ss_pred             ccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC
Q psy15417          3 DHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD   82 (176)
Q Consensus         3 ~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~   82 (176)
                      ||+-+++++.+  ..||-..|..++.+.|...+++|+.|+.+.+||+++|+..+.|++|.+.|+.++|..+...+++|+.
T Consensus        44 WNp~rg~likt--YsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~Sgsf  121 (307)
T KOG0316|consen   44 WNPLRGALIKT--YSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSF  121 (307)
T ss_pred             ecccccceeee--ecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccc
Confidence            67777888775  4678888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE
Q psy15417         83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA  162 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  162 (176)
                      |.++++||-|+...............|.++.+  .+..+++|+.||++|.||+..+.......+  .+|+++.|+++++.
T Consensus       122 D~s~r~wDCRS~s~ePiQildea~D~V~Si~v--~~heIvaGS~DGtvRtydiR~G~l~sDy~g--~pit~vs~s~d~nc  197 (307)
T KOG0316|consen  122 DSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV--AEHEIVAGSVDGTVRTYDIRKGTLSSDYFG--HPITSVSFSKDGNC  197 (307)
T ss_pred             cceeEEEEcccCCCCccchhhhhcCceeEEEe--cccEEEeeccCCcEEEEEeecceeehhhcC--CcceeEEecCCCCE
Confidence            99999999876543222222223346778877  457889999999999999988877666554  56999999999999


Q ss_pred             EEEccCCCcEEEeC
Q psy15417        163 VATGSWDSFLRIWN  176 (176)
Q Consensus       163 l~tg~~d~~v~vwd  176 (176)
                      ...++-|+++|+-|
T Consensus       198 ~La~~l~stlrLlD  211 (307)
T KOG0316|consen  198 SLASSLDSTLRLLD  211 (307)
T ss_pred             EEEeeccceeeecc
Confidence            99999999999865

>KOG0643|consensus

Probab=99.93  E-value=6.7e-25  Score=154.14  Aligned_cols=159  Identities=25%  Similarity=0.453  Sum_probs=132.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec------------------------------------
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP------------------------------------   59 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~------------------------------------   59 (176)
                      +.||++.|+|++.+.+.+++++|+.|.++++||+.+|+.+.+++                                    
T Consensus        48 y~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi  127 (327)
T KOG0643|consen   48 YDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDI  127 (327)
T ss_pred             ecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEc
Confidence            47999999999999999999999999999999999997666544                                    


Q ss_pred             -----------------CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEE
Q psy15417         60 -----------------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL  122 (176)
Q Consensus        60 -----------------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  122 (176)
                                       .+.+.++.+-|.|-+..+++|..||.|.+||+++++........ +...|+.+.++|+..+++
T Consensus       128 ~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~-h~~~Ind~q~s~d~T~Fi  206 (327)
T KOG0643|consen  128 RDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEE-HSSKINDLQFSRDRTYFI  206 (327)
T ss_pred             cCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhh-hccccccccccCCcceEE
Confidence                             23455677788888889999999999999999988765543322 224789999999999999


Q ss_pred             EEcCCCeEEEEeCCCceeeee-------------------------------------------------------ecCC
Q psy15417        123 AGYDDFNCNVWDSMKTERAGI-------------------------------------------------------LAGH  147 (176)
Q Consensus       123 ~g~~d~~i~v~d~~~~~~~~~-------------------------------------------------------~~~~  147 (176)
                      +++.|.+.++||..+-+.+.+                                                       ..+|
T Consensus       207 T~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGH  286 (327)
T KOG0643|consen  207 TGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGH  286 (327)
T ss_pred             ecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhcccccc
Confidence            999999999999654332221                                                       2578


Q ss_pred             CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        148 DNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       148 ~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      -++|+++||+|+|+..++|+.||.||+-
T Consensus       287 FGPINsvAfhPdGksYsSGGEDG~VR~h  314 (327)
T KOG0643|consen  287 FGPINSVAFHPDGKSYSSGGEDGYVRLH  314 (327)
T ss_pred             ccCcceeEECCCCcccccCCCCceEEEE
Confidence            8999999999999999999999999973

>KOG0282|consensus

Probab=99.93  E-value=1.6e-25  Score=167.57  Aligned_cols=161  Identities=29%  Similarity=0.434  Sum_probs=125.0

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.||+.+|..++|+++|..|++++.|+.+++||.++|+++..|.. ...++++.|+|++ +.|++|+.|+.|+.||+|+
T Consensus       253 tf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs  331 (503)
T KOG0282|consen  253 TFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRS  331 (503)
T ss_pred             hhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccc
Confidence            3678999999999999999999999999999999999998887763 2345566666665 5566666666666666654


Q ss_pred             CCe-------------------------------eeEEeec----------------------------------c----
Q psy15417         94 DQE-------------------------------LAMYSHD----------------------------------N----  104 (176)
Q Consensus        94 ~~~-------------------------------~~~~~~~----------------------------------~----  104 (176)
                      ++.                               +..|...                                  +    
T Consensus       332 ~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~i  411 (503)
T KOG0282|consen  332 GKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAI  411 (503)
T ss_pred             hHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEE
Confidence            310                               0000000                                  0    


Q ss_pred             -----------------eE--eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC-CCEEE
Q psy15417        105 -----------------II--CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED-GMAVA  164 (176)
Q Consensus       105 -----------------~~--~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~  164 (176)
                                       +.  ..-..+.|+|||.+|++|..+|.+.+||..+.+.+..+.+|++.+..+.|+|. ...+|
T Consensus       412 fs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skva  491 (503)
T KOG0282|consen  412 FSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVA  491 (503)
T ss_pred             EecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeE
Confidence                             00  01346889999999999999999999999999999999999999999999997 46789


Q ss_pred             EccCCCcEEEeC
Q psy15417        165 TGSWDSFLRIWN  176 (176)
Q Consensus       165 tg~~d~~v~vwd  176 (176)
                      ||++||.|++||
T Consensus       492 t~~w~G~Ikiwd  503 (503)
T KOG0282|consen  492 TCGWDGLIKIWD  503 (503)
T ss_pred             ecccCceeEecC
Confidence            999999999997

>KOG0316|consensus

Probab=99.93  E-value=8e-25  Score=151.50  Aligned_cols=157  Identities=19%  Similarity=0.362  Sum_probs=141.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +.+|++.|..+.|+-+|.+.++|+.|++|++|+...+.+++++.+|...|..++.+.+...|++|+.|..+.+||..+++
T Consensus        13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk   92 (307)
T KOG0316|consen   13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK   92 (307)
T ss_pred             ecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCe
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC--ceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK--TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      ..+.+.  .+...|+.+.|+.+..++++|+-|.++++||...  .+++..+......|.++.+.  +..|++|+.||++|
T Consensus        93 v~Rr~r--gH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvR  168 (307)
T KOG0316|consen   93 VDRRFR--GHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVR  168 (307)
T ss_pred             eeeecc--cccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEE
Confidence            877654  3335799999999999999999999999999765  46777777777888887775  46889999999999


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      .||
T Consensus       169 tyd  171 (307)
T KOG0316|consen  169 TYD  171 (307)
T ss_pred             EEE
Confidence            986

>KOG0276|consensus

Probab=99.93  E-value=2.1e-25  Score=171.74  Aligned_cols=161  Identities=22%  Similarity=0.397  Sum_probs=142.4

Q ss_pred             CCcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC--cEEEEeeCCCcEEE
Q psy15417         12 GSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG--WAFATGSDDATCRL   88 (176)
Q Consensus        12 ~~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~--~~l~s~s~d~~i~i   88 (176)
                      +...++||+..|++++|.| |...+++++-|++||+|.+.+..+..++.+|+..|+++++.+.|  .++++|++|.++++
T Consensus       132 ~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKv  211 (794)
T KOG0276|consen  132 CEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKV  211 (794)
T ss_pred             eeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEE
Confidence            4456899999999999998 56799999999999999999999999999999999999998754  68999999999999


Q ss_pred             eeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      ||..+.+.+...  +.+...|+.+.|||.-+++++|++||++|+|+..+.++..++....++++|++-.+.+..++.|.+
T Consensus       212 WDyQtk~CV~TL--eGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~D  289 (794)
T KOG0276|consen  212 WDYQTKSCVQTL--EGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFD  289 (794)
T ss_pred             eecchHHHHHHh--hcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEecc
Confidence            999877666543  233446889999999999999999999999999888888888877889999999998889999999


Q ss_pred             CCcEEE
Q psy15417        169 DSFLRI  174 (176)
Q Consensus       169 d~~v~v  174 (176)
                      .|.|.+
T Consensus       290 eg~i~v  295 (794)
T KOG0276|consen  290 EGSVTV  295 (794)
T ss_pred             CCcEEE
Confidence            887754

>PTZ00421 coronin; Provisional

Probab=99.93  E-value=5e-24  Score=167.18  Aligned_cols=160  Identities=18%  Similarity=0.276  Sum_probs=128.1

Q ss_pred             ccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.||...|.+++|+|++ .+|++|+.|++|++||+++++....+.+|...|.+++|+|++..|++++.|++|++||+++
T Consensus       120 ~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs  199 (493)
T PTZ00421        120 HLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD  199 (493)
T ss_pred             EecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCC
Confidence            478999999999999975 6999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCeeeEEe-ecceEeceEEEEECCCCcEEEEEc----CCCeEEEEeCCCce-eeeeecCC-CccEEEEEEeCCCCEEEEc
Q psy15417         94 DQELAMYS-HDNIICGITSVAFSRSGRLLLAGY----DDFNCNVWDSMKTE-RAGILAGH-DNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        94 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~----~d~~i~v~d~~~~~-~~~~~~~~-~~~i~~~~~~~~~~~l~tg  166 (176)
                      ++.+.... +..  .....+.|.+++..+++++    .|+.+++||+.... +......+ ...+....|++++.+|++|
T Consensus       200 g~~v~tl~~H~~--~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lg  277 (493)
T PTZ00421        200 GTIVSSVEAHAS--AKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIG  277 (493)
T ss_pred             CcEEEEEecCCC--CcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEE
Confidence            87654432 221  1234567888877666543    47899999987543 33333222 3345556789999999888


Q ss_pred             c-CCCcEEEeC
Q psy15417        167 S-WDSFLRIWN  176 (176)
Q Consensus       167 ~-~d~~v~vwd  176 (176)
                      + .|+.|++||
T Consensus       278 gkgDg~Iriwd  288 (493)
T PTZ00421        278 SKGEGNIRCFE  288 (493)
T ss_pred             EeCCCeEEEEE
Confidence            7 599999996

>KOG0273|consensus

Probab=99.93  E-value=1.3e-24  Score=162.40  Aligned_cols=159  Identities=22%  Similarity=0.349  Sum_probs=141.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC---------cEEEEeeCCCc
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG---------WAFATGSDDAT   85 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~---------~~l~s~s~d~~   85 (176)
                      .+.||.++|+++.|.|.+.+|++||.|++++||......+...+.+|...+..+.|+|.+         ..+++++.|++
T Consensus       354 t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dst  433 (524)
T KOG0273|consen  354 TFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDST  433 (524)
T ss_pred             eeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCe
Confidence            478999999999999999999999999999999998888999999999999999999865         45999999999


Q ss_pred             EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      +++||+..+.++..+  ..+..+|.+++|+|+++++++|+.||.+++|+...++......+ ++.|..++|+.+|.+|..
T Consensus       434 V~lwdv~~gv~i~~f--~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~  510 (524)
T KOG0273|consen  434 VKLWDVESGVPIHTL--MKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKLGA  510 (524)
T ss_pred             EEEEEccCCceeEee--ccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCCCEEEE
Confidence            999999998877654  34456899999999999999999999999999988888777754 466899999999999999


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      +..|+.+.+-|
T Consensus       511 ~~sd~~vcvld  521 (524)
T KOG0273|consen  511 CASDGSVCVLD  521 (524)
T ss_pred             EecCCCceEEE
Confidence            99999887643

>KOG0278|consensus

Probab=99.93  E-value=2.2e-24  Score=150.55  Aligned_cols=159  Identities=26%  Similarity=0.462  Sum_probs=137.8

Q ss_pred             CcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         13 SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ++-..||.+.|..+-|....+.+++.+.|++|++||.++++.++++. -..+|+++.++++|.++ +-...+.|+.||.+
T Consensus       136 p~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~il-Tia~gssV~Fwdak  213 (334)
T KOG0278|consen  136 PKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRIL-TIAYGSSVKFWDAK  213 (334)
T ss_pred             chhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEE-EEecCceeEEeccc
Confidence            33467999999999999888888898999999999999999888887 45689999999999754 45567899999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      +-..+..+..+   +.|.+...+|+...+++|++|..++.||..+++-+.. ..+|.++|.|+.|+|+|...|+||.||+
T Consensus       214 sf~~lKs~k~P---~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGT  290 (334)
T KOG0278|consen  214 SFGLLKSYKMP---CNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGT  290 (334)
T ss_pred             cccceeeccCc---cccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCce
Confidence            76665544433   5678899999999999999999999999998877766 4899999999999999999999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      ||+|.
T Consensus       291 irlWQ  295 (334)
T KOG0278|consen  291 IRLWQ  295 (334)
T ss_pred             EEEEE
Confidence            99993

>KOG0295|consensus

Probab=99.93  E-value=1.3e-25  Score=163.28  Aligned_cols=158  Identities=27%  Similarity=0.453  Sum_probs=144.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||+.+|+.+-|+|+-..+++++.|++|++||..++++...+++|+..|..+.|+..|+++++++.|-.+++||..+.
T Consensus       103 ~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~  182 (406)
T KOG0295|consen  103 KLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF  182 (406)
T ss_pred             hhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHH
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999998653


Q ss_pred             Ce-e-eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         95 QE-L-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        95 ~~-~-~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      .. + ...+++   ..|+++.|-|.+.++++++.|.+|+.|++.++.++.++++|.+++.-++...||..+|+|+.|.++
T Consensus       183 ~~c~ks~~gh~---h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl  259 (406)
T KOG0295|consen  183 FRCIKSLIGHE---HGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTL  259 (406)
T ss_pred             HHHHHHhcCcc---cceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceE
Confidence            21 1 122232   368899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEe
Q psy15417        173 RIW  175 (176)
Q Consensus       173 ~vw  175 (176)
                      ++|
T Consensus       260 ~vW  262 (406)
T KOG0295|consen  260 RVW  262 (406)
T ss_pred             EEE
Confidence            999

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.93  E-value=8.5e-24  Score=153.50  Aligned_cols=159  Identities=38%  Similarity=0.629  Sum_probs=141.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +.+|.+.|.++.|+|++.++++++.|+.+++||+++++....+..|...+.+++|+|++..+++++.++.+++||++..+
T Consensus       131 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~  210 (289)
T cd00200         131 LRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK  210 (289)
T ss_pred             eccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCc
Confidence            44788999999999999999998889999999999998888999999999999999999999999999999999998766


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ....+.  .+...+.++.|+|++.++++++.++.+++|+...++....+..|...+.+++|+|++.+|++++.|+.+++|
T Consensus       211 ~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw  288 (289)
T cd00200         211 CLGTLR--GHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIW  288 (289)
T ss_pred             eecchh--hcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEec
Confidence            655442  122367889999998888888889999999998888888888898999999999999999999999999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      +
T Consensus       289 ~  289 (289)
T cd00200         289 D  289 (289)
T ss_pred             C
Confidence            7

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=5.6e-24  Score=176.49  Aligned_cols=158  Identities=25%  Similarity=0.348  Sum_probs=134.2

Q ss_pred             ccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEc-cCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF-PNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|.+.|++++|+| ++.+|++|+.|++|++||++++++..++..+ ..|.++.|. +++..+++|+.|+.|++||++
T Consensus       570 ~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~  648 (793)
T PLN00181        570 EMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLR  648 (793)
T ss_pred             EecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence            3578999999999997 7889999999999999999999888888755 679999995 568999999999999999998


Q ss_pred             CCCe-eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC------ceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         93 ADQE-LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK------TERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        93 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      .... ....  ..+...|.++.|. ++.++++++.|+++++||+..      ..++..+.+|...+.+++|+|++.+|++
T Consensus       649 ~~~~~~~~~--~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~las  725 (793)
T PLN00181        649 NPKLPLCTM--IGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIAT  725 (793)
T ss_pred             CCCccceEe--cCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEE
Confidence            6542 2222  2233468889997 678899999999999999764      2456778899999999999999999999


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      |+.|+.|++|+
T Consensus       726 gs~D~~v~iw~  736 (793)
T PLN00181        726 GSETNEVFVYH  736 (793)
T ss_pred             EeCCCEEEEEE
Confidence            99999999996

>KOG0310|consensus

Probab=99.93  E-value=3.4e-24  Score=160.60  Aligned_cols=157  Identities=25%  Similarity=0.450  Sum_probs=134.0

Q ss_pred             cCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~   93 (176)
                      +.+|+.+|..+.|+|+ +.+|++|+.|+.+++||+.+...+..+.+|+..|++.+++|. +..++|||-||+|++||+++
T Consensus       106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~  185 (487)
T KOG0310|consen  106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRS  185 (487)
T ss_pred             HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEecc
Confidence            5689999999999995 568899999999999999998877799999999999999996 56899999999999999998


Q ss_pred             C-CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce-eeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         94 D-QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE-RAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        94 ~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      . ..+..+.+.   ++|-.+.+-|.|..+++++.+ .++|||+.++. .+..+..|+..|+|+.+..++.-|.+||-|+.
T Consensus       186 ~~~~v~elnhg---~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~  261 (487)
T KOG0310|consen  186 LTSRVVELNHG---CPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRH  261 (487)
T ss_pred             CCceeEEecCC---CceeeEEEcCCCCEEEEcCCC-eEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccc
Confidence            7 444444444   467788888999988887654 69999988654 44455559999999999999999999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      |++||
T Consensus       262 VKVfd  266 (487)
T KOG0310|consen  262 VKVFD  266 (487)
T ss_pred             eEEEE
Confidence            99996

>KOG0293|consensus

Probab=99.93  E-value=8.1e-25  Score=161.57  Aligned_cols=163  Identities=25%  Similarity=0.518  Sum_probs=130.2

Q ss_pred             cccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         14 PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      +.+.||..+|.-+.||||.++|++|+.+..+.+||+.+|++...++. +.-.+.+++|.|||..+++|+.|+++..||+.
T Consensus       263 ~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD  342 (519)
T KOG0293|consen  263 KTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD  342 (519)
T ss_pred             eeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC
Confidence            34789999999999999999999999999999999999998877753 45789999999999999999999999999975


Q ss_pred             CCCe----------e---------------------eEEeecc--------eEeceEEEEECCC----------------
Q psy15417         93 ADQE----------L---------------------AMYSHDN--------IICGITSVAFSRS----------------  117 (176)
Q Consensus        93 ~~~~----------~---------------------~~~~~~~--------~~~~v~~~~~~~~----------------  117 (176)
                      .+..          +                     ..++.+.        ...+++++..+.+                
T Consensus       343 gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LW  422 (519)
T KOG0293|consen  343 GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLW  422 (519)
T ss_pred             cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEe
Confidence            3210          0                     0000000        0012333333222                


Q ss_pred             -----------------------------CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC-CEEEEcc
Q psy15417        118 -----------------------------GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGS  167 (176)
Q Consensus       118 -----------------------------~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~  167 (176)
                                                   ..++++|++|+.|+||+..+++++..+.+|...|+|++|.|.. .++|++|
T Consensus       423 Dl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASas  502 (519)
T KOG0293|consen  423 DLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASAS  502 (519)
T ss_pred             ecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccC
Confidence                                         2457889999999999999999999999999999999999864 6789999


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      +||+||||.
T Consensus       503 DDgtIRIWg  511 (519)
T KOG0293|consen  503 DDGTIRIWG  511 (519)
T ss_pred             CCCeEEEec
Confidence            999999993

>KOG0274|consensus

Probab=99.93  E-value=5.4e-24  Score=167.72  Aligned_cols=155  Identities=27%  Similarity=0.517  Sum_probs=138.8

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||.+.|.+++|...+.++++|+.|+++++||..+++|...+.+|...|.++...  ..++++|+.|.+|++|++.++
T Consensus       244 ~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~  321 (537)
T KOG0274|consen  244 RLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNG  321 (537)
T ss_pred             eccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCc
Confidence            378999999999998878899999999999999999999999999999999888774  567888999999999999988


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      ..+....-  +..+|.++..+  +.++++|+.|++|++||..+++++..+.+|...|.++.+.+. ..+.+|+.|++|++
T Consensus       322 ~~l~l~~~--h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~Ikv  396 (537)
T KOG0274|consen  322 ACLNLLRG--HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKV  396 (537)
T ss_pred             ceEEEecc--ccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEe
Confidence            87766552  33568888876  789999999999999999999999999999999999987654 78899999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       397 Wd  398 (537)
T KOG0274|consen  397 WD  398 (537)
T ss_pred             ec
Confidence            97

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=1.7e-23  Score=173.62  Aligned_cols=154  Identities=20%  Similarity=0.375  Sum_probs=133.2

Q ss_pred             CccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         19 HTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        19 h~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      +...|.+++|++ ++.+|++++.||+|++||+.+++.+..+.+|...|.+++|+| ++..|++++.|++|++||++++..
T Consensus       531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~  610 (793)
T PLN00181        531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVS  610 (793)
T ss_pred             ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcE
Confidence            346789999987 478999999999999999999999999999999999999997 688999999999999999988766


Q ss_pred             eeEEeecceEeceEEEEEC-CCCcEEEEEcCCCeEEEEeCCCce-eeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         97 LAMYSHDNIICGITSVAFS-RSGRLLLAGYDDFNCNVWDSMKTE-RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~-~~~~~l~~g~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +..+...   ..+.++.|+ +++..+++|+.|+.|++||+.... +...+.+|...|.++.|. ++.+|++++.|++|++
T Consensus       611 ~~~~~~~---~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~iki  686 (793)
T PLN00181        611 IGTIKTK---ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKL  686 (793)
T ss_pred             EEEEecC---CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEE
Confidence            5554432   357788885 568999999999999999987654 466778899999999997 5779999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       687 Wd  688 (793)
T PLN00181        687 WD  688 (793)
T ss_pred             Ee
Confidence            97

>KOG0318|consensus

Probab=99.93  E-value=1.2e-23  Score=159.12  Aligned_cols=158  Identities=19%  Similarity=0.361  Sum_probs=140.6

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec---CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP---GHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      +..|..-|.|+.|+|||..+++++.||++.+||=.+++.+..+.   +|++.|.+++|+||+.+++++|.|.+++|||+.
T Consensus       186 ~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs  265 (603)
T KOG0318|consen  186 FREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVS  265 (603)
T ss_pred             ccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEee
Confidence            35699999999999999999999999999999999999999998   799999999999999999999999999999998


Q ss_pred             CCCeeeEEeecceE--eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         93 ADQELAMYSHDNII--CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        93 ~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      +.+.+..+......  ..+- +.|.  ...|++-+.+|+|.+++.....++..+.+|+..|++++.+|++++|.+|+.||
T Consensus       266 ~~slv~t~~~~~~v~dqqvG-~lWq--kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG  342 (603)
T KOG0318|consen  266 TNSLVSTWPMGSTVEDQQVG-CLWQ--KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDG  342 (603)
T ss_pred             ccceEEEeecCCchhceEEE-EEEe--CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCc
Confidence            88777777654331  1222 3454  56788889999999999888889999999999999999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      .|.-||
T Consensus       343 ~I~~W~  348 (603)
T KOG0318|consen  343 HINSWD  348 (603)
T ss_pred             eEEEEe
Confidence            999986

>KOG0313|consensus

Probab=99.92  E-value=6.5e-24  Score=155.11  Aligned_cols=158  Identities=28%  Similarity=0.408  Sum_probs=137.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||.++|.++.|++ ...+++++.|.+|+.||+.++.++.++.+ ..+.+++..+|..+++++|+.|+.+++||.|.+
T Consensus       255 tl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~  332 (423)
T KOG0313|consen  255 TLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTG  332 (423)
T ss_pred             EecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCC
Confidence            3689999999999987 78899999999999999999998888875 467999999999999999999999999999877


Q ss_pred             Cee-eEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCce-eeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         95 QEL-AMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTE-RAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        95 ~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      +.. ....+..+..=|.++.|+|... .|++|+.|+++++||++..+ ++..+.+|+.+|.++.|.. +.+|++||.|.+
T Consensus       333 ~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~-~~~IvSGGaD~~  411 (423)
T KOG0313|consen  333 DGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE-GGLIVSGGADNK  411 (423)
T ss_pred             CCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccC-CceEEeccCcce
Confidence            543 3334444445578899999865 67889999999999998877 8899999999999999985 678999999999


Q ss_pred             EEEe
Q psy15417        172 LRIW  175 (176)
Q Consensus       172 v~vw  175 (176)
                      ++|+
T Consensus       412 l~i~  415 (423)
T KOG0313|consen  412 LRIF  415 (423)
T ss_pred             EEEe
Confidence            9997

>KOG0296|consensus

Probab=99.92  E-value=2.9e-23  Score=151.09  Aligned_cols=161  Identities=20%  Similarity=0.304  Sum_probs=135.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee--------------------------------------
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--------------------------------------   56 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~--------------------------------------   56 (176)
                      -++||...|.|+.|+.++.+|+||..+|.|++|+..++...+                                      
T Consensus       101 eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~  180 (399)
T KOG0296|consen  101 ELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ  180 (399)
T ss_pred             EecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCc
Confidence            478999999999999999999999999999999987764333                                      


Q ss_pred             ----EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec-----------------------------
Q psy15417         57 ----TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD-----------------------------  103 (176)
Q Consensus        57 ----~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-----------------------------  103 (176)
                          .+.||..++++-.|.|+|+.++++..|++|++||+++++++......                             
T Consensus       181 ~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~  260 (399)
T KOG0296|consen  181 ALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGV  260 (399)
T ss_pred             ceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEE
Confidence                34479999999999999999999999999999999887654332200                             


Q ss_pred             -----------c-----------------------------------------------------eEeceEEEEECCCCc
Q psy15417        104 -----------N-----------------------------------------------------IICGITSVAFSRSGR  119 (176)
Q Consensus       104 -----------~-----------------------------------------------------~~~~v~~~~~~~~~~  119 (176)
                                 .                                                     +..+|..+.|-+ ..
T Consensus       261 ~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~  339 (399)
T KOG0296|consen  261 NNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TD  339 (399)
T ss_pred             ccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC-cc
Confidence                       0                                                     000256677776 57


Q ss_pred             EEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        120 LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       120 ~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++++++.+|.++.||.+++....++.+|+..|.+++++|+.+.++|+|.|++.+||+
T Consensus       340 ~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~  396 (399)
T KOG0296|consen  340 YLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFE  396 (399)
T ss_pred             hheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEe
Confidence            888999999999999999999999999999999999999999999999999999984

>KOG0283|consensus

Probab=99.92  E-value=9.5e-24  Score=166.55  Aligned_cols=156  Identities=26%  Similarity=0.420  Sum_probs=127.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +.||.+.|..+.||.+ .+|+++|+|+||+||++...+|++.|. |..-|+||+|+| |.++|++|+.|+.+|||++...
T Consensus       365 f~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~  442 (712)
T KOG0283|consen  365 FKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDK  442 (712)
T ss_pred             hhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcC
Confidence            5799999999999975 678899999999999999999999997 999999999999 5789999999999999999755


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee--cCC------CccEEEEEEeCCCC-EEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL--AGH------DNRVSCLGVTEDGM-AVAT  165 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~--~~~------~~~i~~~~~~~~~~-~l~t  165 (176)
                      +. ..+. + ...-|++++|.|+|...++|+.+|.+++|+....+.....  ..|      ..+|+.+.|.|... .++.
T Consensus       443 ~V-v~W~-D-l~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLV  519 (712)
T KOG0283|consen  443 KV-VDWN-D-LRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLV  519 (712)
T ss_pred             ee-Eeeh-h-hhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEE
Confidence            43 3332 1 1135889999999999999999999999997655443322  111      23799999987643 4667


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      .+.|..|||||
T Consensus       520 TSnDSrIRI~d  530 (712)
T KOG0283|consen  520 TSNDSRIRIYD  530 (712)
T ss_pred             ecCCCceEEEe
Confidence            77899999997

>KOG0302|consensus

Probab=99.92  E-value=6.1e-24  Score=155.29  Aligned_cols=167  Identities=23%  Similarity=0.426  Sum_probs=138.2

Q ss_pred             cCCCcccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCe---eeeEecCCCCCeeEEEEccC-CcEEEEeeCCC
Q psy15417         10 LLGSPAASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPN-GWAFATGSDDA   84 (176)
Q Consensus        10 ~~~~~~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~   84 (176)
                      ....+.+.||.+.=+.++|||-. ..|++|.+-+.|.+|...++.   -...|.+|+.+|..++|+|. ...|+|||.|+
T Consensus       201 ~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dg  280 (440)
T KOG0302|consen  201 FRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDG  280 (440)
T ss_pred             cCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCc
Confidence            44445577899888999999943 358899999999999998874   34567789999999999996 56899999999


Q ss_pred             cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC---ceeeeeecCCCccEEEEEEeCC-C
Q psy15417         85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK---TERAGILAGHDNRVSCLGVTED-G  160 (176)
Q Consensus        85 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~-~  160 (176)
                      +|+|||+|+.+.........+...|+.+.|+.+-.+|++|+.||+++|||++.   +.++..+..|..+|+++.|+|. .
T Consensus       281 sIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~  360 (440)
T KOG0302|consen  281 SIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHED  360 (440)
T ss_pred             eEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccC
Confidence            99999999885433322233445799999999888999999999999999764   4677889999999999999986 4


Q ss_pred             CEEEEccCCCcEEEeC
Q psy15417        161 MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 ~~l~tg~~d~~v~vwd  176 (176)
                      ..|+++|.|.+|.+||
T Consensus       361 s~iaasg~D~QitiWD  376 (440)
T KOG0302|consen  361 SVIAASGEDNQITIWD  376 (440)
T ss_pred             ceEEeccCCCcEEEEE
Confidence            5778889999999997

>KOG0264|consensus

Probab=99.92  E-value=9.4e-24  Score=156.88  Aligned_cols=164  Identities=25%  Similarity=0.384  Sum_probs=134.6

Q ss_pred             CcccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCe-------eeeEecCCCCCeeEEEEccC-CcEEEEeeCC
Q psy15417         13 SPAASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGS-------CKQTFPGHESDINAVTFFPN-GWAFATGSDD   83 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~-------~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d   83 (176)
                      ...+.||+..=+.++|++.. ..|++|+.|++|++||++...       ....+.+|+..|+.++|++- ...|++++.|
T Consensus       170 dl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd  249 (422)
T KOG0264|consen  170 DLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDD  249 (422)
T ss_pred             ceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCC
Confidence            34578999977889998854 589999999999999996432       35578899999999999995 5689999999


Q ss_pred             CcEEEeeCCCCCeeeEEeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCCC-
Q psy15417         84 ATCRLFDIRADQELAMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTEDG-  160 (176)
Q Consensus        84 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-  160 (176)
                      +.+.|||+|++..........+..+++|++|+|- +.+|++|+.|+++++||++. .+++.++.+|...|.++.|+|+. 
T Consensus       250 ~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~e  329 (422)
T KOG0264|consen  250 GKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNE  329 (422)
T ss_pred             CeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCC
Confidence            9999999996422112223334467999999996 46789999999999999765 35777889999999999999984 


Q ss_pred             CEEEEccCCCcEEEeC
Q psy15417        161 MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 ~~l~tg~~d~~v~vwd  176 (176)
                      ..||+++.|+.+.|||
T Consensus       330 tvLASSg~D~rl~vWD  345 (422)
T KOG0264|consen  330 TVLASSGTDRRLNVWD  345 (422)
T ss_pred             ceeEecccCCcEEEEe
Confidence            6789999999999997

>KOG0318|consensus

Probab=99.92  E-value=4.8e-23  Score=155.98  Aligned_cols=160  Identities=22%  Similarity=0.284  Sum_probs=120.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEE---------------
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAF---------------   77 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l---------------   77 (176)
                      .+++|..+++-+.|+|.|.++++|...|+|++||....+  +..+++--.++|..++|+++++.+               
T Consensus        54 iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~  133 (603)
T KOG0318|consen   54 IYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFL  133 (603)
T ss_pred             eeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEE
Confidence            467899999999999999999999999999999965422  344444444455555555555444               


Q ss_pred             ------------------------------EEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC
Q psy15417         78 ------------------------------ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD  127 (176)
Q Consensus        78 ------------------------------~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d  127 (176)
                                                    ++|++|+++.+|+-.-  -.-...+..+..=|+++.|+|||..+++.+.|
T Consensus       134 ~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP--FKFk~s~r~HskFV~~VRysPDG~~Fat~gsD  211 (603)
T KOG0318|consen  134 WDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP--FKFKSSFREHSKFVNCVRYSPDGSRFATAGSD  211 (603)
T ss_pred             ecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC--eeeeecccccccceeeEEECCCCCeEEEecCC
Confidence                                          4444444444443110  00011112222348899999999999999999


Q ss_pred             CeEEEEeCCCceeeeeec---CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        128 FNCNVWDSMKTERAGILA---GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       128 ~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |++.+||-.+++.+..+.   +|.+.|.+++|+||+..++|+|.|.++||||
T Consensus       212 gki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWd  263 (603)
T KOG0318|consen  212 GKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWD  263 (603)
T ss_pred             ccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEE
Confidence            999999999999999887   8999999999999999999999999999997

>KOG0281|consensus

Probab=99.91  E-value=9.9e-25  Score=158.45  Aligned_cols=161  Identities=20%  Similarity=0.429  Sum_probs=135.5

Q ss_pred             cccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eeeEecCCCCCeeEEEEccCCcEEEEe
Q psy15417          4 HLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNGWAFATG   80 (176)
Q Consensus         4 ~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~   80 (176)
                      +-.+++.+.  .+.+|.+.|..+.|+  ..+++++|.|.++.+||+.+..   +.+.+.||-+.|+.+.|+  .++++++
T Consensus       263 Dv~tge~l~--tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsA  336 (499)
T KOG0281|consen  263 DVNTGEPLN--TLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSA  336 (499)
T ss_pred             eccCCchhh--HHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEe
Confidence            334444444  467899999999997  4689999999999999998764   455778999999999995  5699999


Q ss_pred             eCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC
Q psy15417         81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus        81 s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~  160 (176)
                      |.|++|++|++.+.+.+...  ..+..+|.|+.+  .++++++|+.|.+|++||++.+.++..+.+|+.-|.|+.|.  .
T Consensus       337 SgDRTikvW~~st~efvRtl--~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~  410 (499)
T KOG0281|consen  337 SGDRTIKVWSTSTCEFVRTL--NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N  410 (499)
T ss_pred             cCCceEEEEeccceeeehhh--hcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--C
Confidence            99999999999888766543  233356777765  68999999999999999999999999999999999999995  4


Q ss_pred             CEEEEccCCCcEEEeC
Q psy15417        161 MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 ~~l~tg~~d~~v~vwd  176 (176)
                      +.|++|+.||+|||||
T Consensus       411 krIVSGaYDGkikvWd  426 (499)
T KOG0281|consen  411 KRIVSGAYDGKIKVWD  426 (499)
T ss_pred             ceeeeccccceEEEEe
Confidence            6889999999999997

>KOG1332|consensus

Probab=99.91  E-value=6.7e-24  Score=147.49  Aligned_cols=161  Identities=21%  Similarity=0.323  Sum_probs=132.3

Q ss_pred             ccCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~i   88 (176)
                      .|.||+++|..++|..  .|.+|++++.||.|.||.-..++  .......|.++|++++|.|.  |-.|++++.||.|++
T Consensus        51 ~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsv  130 (299)
T KOG1332|consen   51 ELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSV  130 (299)
T ss_pred             EecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEE
Confidence            4789999999999954  78999999999999999998874  34566789999999999986  678999999999999


Q ss_pred             eeCCCC-CeeeEEeecceEeceEEEEECCC---C-----------cEEEEEcCCCeEEEEeCCCc--eeeeeecCCCccE
Q psy15417         89 FDIRAD-QELAMYSHDNIICGITSVAFSRS---G-----------RLLLAGYDDFNCNVWDSMKT--ERAGILAGHDNRV  151 (176)
Q Consensus        89 wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~---~-----------~~l~~g~~d~~i~v~d~~~~--~~~~~~~~~~~~i  151 (176)
                      .+.+++ .-........+..+++++.|.|.   |           ..|++|+.|..++||+....  +...++.+|.++|
T Consensus       131 l~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwV  210 (299)
T KOG1332|consen  131 LTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWV  210 (299)
T ss_pred             EEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhh
Confidence            988765 21122223334457899999886   4           45999999999999986653  4455688999999


Q ss_pred             EEEEEeCC----CCEEEEccCCCcEEEe
Q psy15417        152 SCLGVTED----GMAVATGSWDSFLRIW  175 (176)
Q Consensus       152 ~~~~~~~~----~~~l~tg~~d~~v~vw  175 (176)
                      +.+|+.|.    ..+||+||.||+|.||
T Consensus       211 RDVAwaP~~gl~~s~iAS~SqDg~viIw  238 (299)
T KOG1332|consen  211 RDVAWAPSVGLPKSTIASCSQDGTVIIW  238 (299)
T ss_pred             hhhhhccccCCCceeeEEecCCCcEEEE
Confidence            99999986    3579999999999999

>KOG1446|consensus

Probab=99.91  E-value=1.7e-22  Score=144.61  Aligned_cols=160  Identities=26%  Similarity=0.396  Sum_probs=132.3

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||...|+.++.+|-+..+++++.|++|++||++..+|...+.....  ..++|.|+|-.+|.+.....|++||+|+-
T Consensus        95 YF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--pi~AfDp~GLifA~~~~~~~IkLyD~Rs~  172 (311)
T KOG1446|consen   95 YFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--PIAAFDPEGLIFALANGSELIKLYDLRSF  172 (311)
T ss_pred             EcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC--cceeECCCCcEEEEecCCCeEEEEEeccc
Confidence            3689999999999999999999999999999999998888777664433  34899999999999888889999999864


Q ss_pred             C--eeeEEeec-ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccE---EEEEEeCCCCEEEEccC
Q psy15417         95 Q--ELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV---SCLGVTEDGMAVATGSW  168 (176)
Q Consensus        95 ~--~~~~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i---~~~~~~~~~~~l~tg~~  168 (176)
                      +  +...+... ......+.+.|+|+|++++.+...+.+++.|.-++.....+..+.+.-   ...+|+|+++++.+|+.
T Consensus       173 dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~  252 (311)
T KOG1446|consen  173 DKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSD  252 (311)
T ss_pred             CCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecC
Confidence            2  22333322 223467889999999999999999999999998998888887664432   35679999999999999


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      ||+|.+|+
T Consensus       253 dg~i~vw~  260 (311)
T KOG1446|consen  253 DGTIHVWN  260 (311)
T ss_pred             CCcEEEEE
Confidence            99999996

>KOG0289|consensus

Probab=99.91  E-value=4.1e-23  Score=153.24  Aligned_cols=153  Identities=26%  Similarity=0.446  Sum_probs=134.6

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~  101 (176)
                      .+++++|+|||.+|.+|..|+.|++||+.++.....|++|+++|..++|+.+|.+++++.+|+.|++||+|.......+.
T Consensus       349 ~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~  428 (506)
T KOG0289|consen  349 EYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQ  428 (506)
T ss_pred             eeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceee
Confidence            48899999999999999999999999999999899999999999999999999999999999999999999877766666


Q ss_pred             ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC--CceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        102 HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM--KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       102 ~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      .+... ++.++.|.+.|.++++++.+=++++++..  .+..+..+..|.+...++.|.....+++++|-|..++++
T Consensus       429 l~~~~-~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~  503 (506)
T KOG0289|consen  429 LDEKK-EVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLY  503 (506)
T ss_pred             ccccc-cceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEe
Confidence            55433 68899999999999999887777777632  345666777888888999999999999999999998876

>KOG0646|consensus

Probab=99.91  E-value=1.1e-22  Score=151.97  Aligned_cols=170  Identities=22%  Similarity=0.363  Sum_probs=143.9

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC---------CCeeeeEecCCCCCeeEEEEcc
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR---------DGSCKQTFPGHESDINAVTFFP   72 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~---------~~~~~~~~~~h~~~v~~v~~~~   72 (176)
                      +|.+++++++.  .+.+|=..|+|+.|+.|+.+++||+.||.|.+|.+-         +.+....|..|+-+|+++...+
T Consensus       107 lWelssG~LL~--v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~  184 (476)
T KOG0646|consen  107 LWELSSGILLN--VLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGS  184 (476)
T ss_pred             EEEeccccHHH--HHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecC
Confidence            45566777776  457899999999999999999999999999999862         3456788999999999998876


Q ss_pred             C--CcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc------------
Q psy15417         73 N--GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT------------  138 (176)
Q Consensus        73 ~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~------------  138 (176)
                      .  ...++|+|.|+++++||+..+..+....++.   .+.+++.+|-.+.+++|+.+|.|.+.++...            
T Consensus       185 Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~---si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~  261 (476)
T KOG0646|consen  185 GGTNARLYTASEDRTIKLWDLSLGVLLLTITFPS---SIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGR  261 (476)
T ss_pred             CCccceEEEecCCceEEEEEeccceeeEEEecCC---cceeEEEcccccEEEecCCcceEEeeehhcCCccccccccccc
Confidence            5  4579999999999999998887776665553   5789999999999999999999988774322            


Q ss_pred             ----eeeeeecCCCc--cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        139 ----ERAGILAGHDN--RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       139 ----~~~~~~~~~~~--~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                          .....+.+|.+  .|+|++++-||..|++|+.||.|.|||
T Consensus       262 ~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWd  305 (476)
T KOG0646|consen  262 HEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWD  305 (476)
T ss_pred             ccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEe
Confidence                24455678888  899999999999999999999999997

>KOG0640|consensus

Probab=99.91  E-value=1.3e-23  Score=150.73  Aligned_cols=161  Identities=25%  Similarity=0.458  Sum_probs=136.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      +.-|..+|+++.|+|-...|++|+.|++||++|+......+.++  ....+|.++.|+|.|..++.|.+..++++||+.+
T Consensus       168 lYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T  247 (430)
T KOG0640|consen  168 LYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNT  247 (430)
T ss_pred             hhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccc
Confidence            34599999999999999999999999999999998654443332  3467899999999999999999999999999988


Q ss_pred             CCeeeEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-CCCc-cEEEEEEeCCCCEEEEccCCC
Q psy15417         94 DQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-GHDN-RVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        94 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-~~~~-~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      -|....- +...+...|+++.+++.++++++++.||.|++||--..+++.++. +|.+ .|.+..|..+++|+.+.+.|.
T Consensus       248 ~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS  327 (430)
T KOG0640|consen  248 YQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDS  327 (430)
T ss_pred             eeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcc
Confidence            7664332 233445679999999999999999999999999988888877764 5655 577788999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      .+++|.
T Consensus       328 ~vkLWE  333 (430)
T KOG0640|consen  328 TVKLWE  333 (430)
T ss_pred             eeeeee
Confidence            999993

>KOG0293|consensus

Probab=99.91  E-value=4.2e-23  Score=152.54  Aligned_cols=160  Identities=21%  Similarity=0.309  Sum_probs=136.0

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG---SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      +..|...|+-+.||++|++||+++.|.+..+|++..-   +...++.+|..+|..+.|+||.+++++|+.|-.+++||..
T Consensus       220 l~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~  299 (519)
T KOG0293|consen  220 LQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVD  299 (519)
T ss_pred             HhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCC
Confidence            5679999999999999999999999999999987532   4578999999999999999999999999999999999999


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      +++....++.. +...+++++|.||+..+++|+.|++|..||+.......-..-....|.+++.++||+++.+.+.|..+
T Consensus       300 tgd~~~~y~~~-~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i  378 (519)
T KOG0293|consen  300 TGDLRHLYPSG-LGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKI  378 (519)
T ss_pred             cchhhhhcccC-cCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccce
Confidence            98877776654 23467889999999999999999999999975443222111123568999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++++
T Consensus       379 ~l~~  382 (519)
T KOG0293|consen  379 RLYN  382 (519)
T ss_pred             eeec
Confidence            9985

>KOG0269|consensus

Probab=99.91  E-value=4.9e-24  Score=167.19  Aligned_cols=150  Identities=21%  Similarity=0.398  Sum_probs=127.9

Q ss_pred             EEEEcC-CCCEEEEEeCCCeEEEEEcCC---CeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         25 SLSLAP-DMRTFVSGACDASAKLWDIRD---GSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        25 ~~~~~~-~~~~l~s~s~dg~v~~wd~~~---~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      .+.|.. ...+++|++.+|.|.+||+..   ++.+..|..|+..+++++|++. .++|++||+||+|++||+|..+....
T Consensus        92 DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t  171 (839)
T KOG0269|consen   92 DVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKST  171 (839)
T ss_pred             hcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccc
Confidence            355653 456899999999999999987   5667789999999999999985 78999999999999999998766554


Q ss_pred             EeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        100 YSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.-..  ..|-.|.|+|. +..|+++.++|.+++||++.. +++..+.+|+++|.|+.|+|++.+|||||.|++|+|||
T Consensus       172 ~~~nS--ESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd  248 (839)
T KOG0269|consen  172 FRSNS--ESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWD  248 (839)
T ss_pred             ccccc--hhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEe
Confidence            43322  45778999996 678999999999999998764 45667889999999999999999999999999999996

>PTZ00420 coronin; Provisional

Probab=99.91  E-value=7.8e-22  Score=156.17  Aligned_cols=161  Identities=14%  Similarity=0.155  Sum_probs=123.0

Q ss_pred             ccCCCccCeEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~-l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.+|...|.+++|+|++.. +++++.|++|++||+++++....+. |...|.+++|+|+|.+|++++.|+.|++||+++
T Consensus       120 ~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs  198 (568)
T PTZ00420        120 ILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK  198 (568)
T ss_pred             EeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCC
Confidence            36789999999999998875 5799999999999999998777776 567899999999999999999999999999998


Q ss_pred             CCeeeEEe-ecceE--eceEEEEECCCCcEEEEEcCC----CeEEEEeCCC-ceeeeeecC--CCccEEEEEEeCCCCEE
Q psy15417         94 DQELAMYS-HDNII--CGITSVAFSRSGRLLLAGYDD----FNCNVWDSMK-TERAGILAG--HDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        94 ~~~~~~~~-~~~~~--~~v~~~~~~~~~~~l~~g~~d----~~i~v~d~~~-~~~~~~~~~--~~~~i~~~~~~~~~~~l  163 (176)
                      ++.+..+. +....  ..+....|++++.++++++.+    +++++||+.. .+++.....  +.+.+......+++.++
T Consensus       199 g~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~  278 (568)
T PTZ00420        199 QEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIY  278 (568)
T ss_pred             CcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEE
Confidence            87765443 22211  112334567888888887666    4799999874 444444332  23334444445668899


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      ++|+.|++||+|+
T Consensus       279 lsGkGD~tIr~~e  291 (568)
T PTZ00420        279 LIGKGDGNCRYYQ  291 (568)
T ss_pred             EEEECCCeEEEEE
Confidence            9999999999995

>KOG0294|consensus

Probab=99.91  E-value=1.6e-22  Score=144.97  Aligned_cols=160  Identities=20%  Similarity=0.349  Sum_probs=132.6

Q ss_pred             cCCCccCeEEEEEcCCCC--EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMR--TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~--~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      +.-|.+.|+++.|.++..  .|++|+.||.|.+|+...-+++.++++|.+.|+.++.+|.+++.++.+.|+.++.||+..
T Consensus        79 ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~  158 (362)
T KOG0294|consen   79 LLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVR  158 (362)
T ss_pred             eeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhc
Confidence            345999999999998765  899999999999999999999999999999999999999999999999999999999754


Q ss_pred             CCe-----------eeEEeecce--------------------------EeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         94 DQE-----------LAMYSHDNI--------------------------ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        94 ~~~-----------~~~~~~~~~--------------------------~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                      +..           +..|.....                          ..++.++.|- ++..|++|..|+.|++||..
T Consensus       159 Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~d  237 (362)
T KOG0294|consen  159 GRVAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGDNEWISLKDTD  237 (362)
T ss_pred             CccceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeec-CCceEEEecCCceEEEeccC
Confidence            421           111111000                          0124555554 56788999999999999988


Q ss_pred             CceeeeeecCCCccEEEEEE--eCCCCEEEEccCCCcEEEeC
Q psy15417        137 KTERAGILAGHDNRVSCLGV--TEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       137 ~~~~~~~~~~~~~~i~~~~~--~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ...+...+.+|.++|-.+.+  .|.+.+|+|+|.||.|+|||
T Consensus       238 s~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd  279 (362)
T KOG0294|consen  238 SDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWD  279 (362)
T ss_pred             CCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEE
Confidence            78889999999999988874  35688999999999999997

>KOG0269|consensus

Probab=99.91  E-value=8.7e-24  Score=165.83  Aligned_cols=161  Identities=21%  Similarity=0.307  Sum_probs=131.1

Q ss_pred             ccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~   92 (176)
                      ++..|+..|++++|++. ..+|++||.||+||+||+++.+...++.+...+|+.|+|+|. +..|+++.+.|.+++||+|
T Consensus       128 ~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlR  207 (839)
T KOG0269|consen  128 VFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLR  207 (839)
T ss_pred             HhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeecc
Confidence            57789999999999884 569999999999999999999999999998899999999995 7899999999999999999


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-CccEEEEEEeCCCCE-EEEcc--C
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-DNRVSCLGVTEDGMA-VATGS--W  168 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~-l~tg~--~  168 (176)
                      ...... ..+..+..+|.++.|||++.+|++|+.|++++|||....+.-....-+ ..++.++.|.|...+ ||+++  .
T Consensus       208 qp~r~~-~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~  286 (839)
T KOG0269|consen  208 QPDRCE-KKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVV  286 (839)
T ss_pred             CchhHH-HHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccc
Confidence            765421 222334457899999999999999999999999997654332222212 246889999998544 67765  4


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      |..|+|||
T Consensus       287 dtsV~VWD  294 (839)
T KOG0269|consen  287 DTSVHVWD  294 (839)
T ss_pred             cceEEEEe
Confidence            77899997

>KOG0306|consensus

Probab=99.91  E-value=7.6e-23  Score=160.30  Aligned_cols=153  Identities=25%  Similarity=0.441  Sum_probs=141.6

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee-e
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL-A   98 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~-~   98 (176)
                      +..|.|+.+|||+++|+.+=-|.+|++|=+++-+.--.+-||.-||.++.++||++.++|||.|..|++|-+.-++.- .
T Consensus       508 ~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS  587 (888)
T KOG0306|consen  508 EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKS  587 (888)
T ss_pred             cccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhh
Confidence            578999999999999999999999999999998888889999999999999999999999999999999988766543 3


Q ss_pred             EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         99 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      .+.++.   .|.++.|-|....+++++-|+.++-||.++.+.+..+.+|...|+|++.+|+|.+++++|.|.+||+|
T Consensus       588 ~fAHdD---Svm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlw  661 (888)
T KOG0306|consen  588 FFAHDD---SVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLW  661 (888)
T ss_pred             hhcccC---ceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEee
Confidence            445554   57899999999999999999999999999999999999999999999999999999999999999999

>KOG0772|consensus

Probab=99.90  E-value=2.2e-23  Score=157.59  Aligned_cols=161  Identities=25%  Similarity=0.428  Sum_probs=128.7

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---------------eee------------------------
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---------------CKQ------------------------   56 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---------------~~~------------------------   56 (176)
                      +.+|+..|.++++.|.|..|++|+.|.+|++||++--.               .++                        
T Consensus       163 l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~D  242 (641)
T KOG0772|consen  163 LKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLD  242 (641)
T ss_pred             ccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEc
Confidence            56899999999999999999999999999999975210               000                        


Q ss_pred             --------------------EecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCC-eeeEEeec---ceEeceEE
Q psy15417         57 --------------------TFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQ-ELAMYSHD---NIICGITS  111 (176)
Q Consensus        57 --------------------~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~~---~~~~~v~~  111 (176)
                                          ..+||...+++.+|+|. ...|++++.|+++|+||+.... ++.++.+.   ....++++
T Consensus       243 RdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~ts  322 (641)
T KOG0772|consen  243 RDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTS  322 (641)
T ss_pred             cCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCcee
Confidence                                12278889999999997 4579999999999999986432 33333322   22346789


Q ss_pred             EEECCCCcEEEEEcCCCeEEEEeCCCc---eeeeeecCCCc--cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        112 VAFSRSGRLLLAGYDDFNCNVWDSMKT---ERAGILAGHDN--RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       112 ~~~~~~~~~l~~g~~d~~i~v~d~~~~---~~~~~~~~~~~--~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++|+|++..+++|..||.|.+|+....   ..+....+|..  .|+|++|+++|++|++-|.|.++++||
T Consensus       323 C~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWD  392 (641)
T KOG0772|consen  323 CAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWD  392 (641)
T ss_pred             eecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeee
Confidence            999999999999999999999996432   22334457877  799999999999999999999999997

>KOG0264|consensus

Probab=99.90  E-value=6.7e-23  Score=152.38  Aligned_cols=167  Identities=26%  Similarity=0.383  Sum_probs=139.1

Q ss_pred             ccCCCcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcC--CCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCC
Q psy15417          9 ALLGSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIR--DGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDA   84 (176)
Q Consensus         9 ~~~~~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~   84 (176)
                      .+.....+.||+..|..++|++ ...+|++++.|+.+.|||.+  +.+......+|+++|++++|.|- +..||+||.|+
T Consensus       216 ~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~  295 (422)
T KOG0264|consen  216 VVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADK  295 (422)
T ss_pred             cccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCC
Confidence            3555556899999999999998 45689999999999999999  56677788899999999999995 67899999999


Q ss_pred             cEEEeeCCCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCc--------------eeeeeecCCCc
Q psy15417         85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKT--------------ERAGILAGHDN  149 (176)
Q Consensus        85 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~--------------~~~~~~~~~~~  149 (176)
                      +|.+||+|.... ....++.+...|.++.|+|.. .+|++++.|+.+.|||+.+-              +.+....+|..
T Consensus       296 tV~LwDlRnL~~-~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~  374 (422)
T KOG0264|consen  296 TVALWDLRNLNK-PLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTA  374 (422)
T ss_pred             cEEEeechhccc-CceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCccc
Confidence            999999997544 334455566689999999985 57888999999999997542              23356678999


Q ss_pred             cEEEEEEeCCCC-EEEEccCCCcEEEeC
Q psy15417        150 RVSCLGVTEDGM-AVATGSWDSFLRIWN  176 (176)
Q Consensus       150 ~i~~~~~~~~~~-~l~tg~~d~~v~vwd  176 (176)
                      .|..+.|.|+.. .|++.+.|+.+.||.
T Consensus       375 kV~DfsWnp~ePW~I~SvaeDN~LqIW~  402 (422)
T KOG0264|consen  375 KVSDFSWNPNEPWTIASVAEDNILQIWQ  402 (422)
T ss_pred             ccccccCCCCCCeEEEEecCCceEEEee
Confidence            999999999865 468999999999994

>KOG0641|consensus

Probab=99.90  E-value=4.9e-22  Score=137.37  Aligned_cols=159  Identities=25%  Similarity=0.431  Sum_probs=127.3

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee-----eEecCCCCCeeEEEEcc-------------------
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK-----QTFPGHESDINAVTFFP-------------------   72 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~-----~~~~~h~~~v~~v~~~~-------------------   72 (176)
                      .-|.+.|+|.+|+|+|.++++|+.|++|++.-++...+.     ..|..|.+-|+.++|..                   
T Consensus        86 khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~i  165 (350)
T KOG0641|consen   86 KHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKI  165 (350)
T ss_pred             cccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceE
Confidence            458899999999999999999999999998766533221     23444555555555432                   


Q ss_pred             ---------------------------CCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc-----eEeceEEEEECCCCcE
Q psy15417         73 ---------------------------NGWAFATGSDDATCRLFDIRADQELAMYSHDN-----IICGITSVAFSRSGRL  120 (176)
Q Consensus        73 ---------------------------~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~  120 (176)
                                                 ++..+++|++|.+|++||++-+..+.......     ....|.++++.|.|++
T Consensus       166 y~tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrl  245 (350)
T KOG0641|consen  166 YITDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRL  245 (350)
T ss_pred             EEeecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcce
Confidence                                       23458899999999999998665554432211     1245788999999999


Q ss_pred             EEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        121 LLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       121 l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      |++|.+|..+-+||+..++.+..+..|...|.|+.|+|...|+.+|+.|..|++=
T Consensus       246 l~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~iklt  300 (350)
T KOG0641|consen  246 LASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLT  300 (350)
T ss_pred             eeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEe
Confidence            9999999999999999999999999999999999999999999999999999874

>KOG1407|consensus

Probab=99.90  E-value=4.3e-22  Score=139.65  Aligned_cols=171  Identities=20%  Similarity=0.371  Sum_probs=146.8

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEe
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATG   80 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~   80 (176)
                      ++|+++.+++......||.+.|-.++|+| ....|++++.|++|++||++++++........+. ..+.|+|+|.+++.+
T Consensus        46 v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~en-i~i~wsp~g~~~~~~  124 (313)
T KOG1407|consen   46 VWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGEN-INITWSPDGEYIAVG  124 (313)
T ss_pred             EEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcc-eEEEEcCCCCEEEEe
Confidence            45677777777778899999999999987 4579999999999999999999998877654444 458899999999999


Q ss_pred             eCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC
Q psy15417         81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus        81 s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~  160 (176)
                      +.|..|...|.++-+.....++..   .++-+.|+-++.+++.....|++.|.....-+++..+.+|.....|+.|+|+|
T Consensus       125 ~kdD~it~id~r~~~~~~~~~~~~---e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~G  201 (313)
T KOG1407|consen  125 NKDDRITFIDARTYKIVNEEQFKF---EVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDG  201 (313)
T ss_pred             cCcccEEEEEecccceeehhcccc---eeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCC
Confidence            999999999998776655544443   35668888788888888888999999988889999999999999999999999


Q ss_pred             CEEEEccCCCcEEEeC
Q psy15417        161 MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 ~~l~tg~~d~~v~vwd  176 (176)
                      .++|+|+.|-.+-+||
T Consensus       202 ryfA~GsADAlvSLWD  217 (313)
T KOG1407|consen  202 RYFATGSADALVSLWD  217 (313)
T ss_pred             ceEeeccccceeeccC
Confidence            9999999999999997

>KOG0308|consensus

Probab=99.90  E-value=4.9e-23  Score=159.13  Aligned_cols=161  Identities=24%  Similarity=0.432  Sum_probs=142.7

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--eeeeEecCCCCCeeEEEE-ccCCcEEEEeeCCCcEEEeeCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG--SCKQTFPGHESDINAVTF-FPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~-~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ...|...|+.+....+++.|+++|.|-+|++|+....  -|..+++.|..-|.++++ .++..++++||.|+.|.+||+.
T Consensus        69 me~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin  148 (735)
T KOG0308|consen   69 MEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDIN  148 (735)
T ss_pred             hhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEcc
Confidence            4569999999999999999999999999999999877  588899999999999999 7888999999999999999998


Q ss_pred             CCC--eeeEEe------ec-ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE
Q psy15417         93 ADQ--ELAMYS------HD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        93 ~~~--~~~~~~------~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  163 (176)
                      ++.  .+..+.      .. ++..++.+++-++.+..+++|+..+-+++||..+++.+..+.+|..-|.++-.+++|..+
T Consensus       149 ~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~  228 (735)
T KOG0308|consen  149 TGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRL  228 (735)
T ss_pred             CcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeE
Confidence            652  222221      11 334578899999999999999999999999999999999999999999999999999999


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      +++|.|++||+||
T Consensus       229 ls~sSDgtIrlWd  241 (735)
T KOG0308|consen  229 LSASSDGTIRLWD  241 (735)
T ss_pred             eecCCCceEEeee
Confidence            9999999999997

>KOG0305|consensus

Probab=99.89  E-value=5.9e-22  Score=152.35  Aligned_cols=158  Identities=27%  Similarity=0.477  Sum_probs=139.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEee--CCCcEEEeeCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGS--DDATCRLFDIR   92 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s--~d~~i~iwd~~   92 (176)
                      +.+|+..|-.+.|++|+.+|++|+.|..+.|||....+.+.++.+|.+.|.+++|+|- ...||+|+  .|+.|++||..
T Consensus       297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~  376 (484)
T KOG0305|consen  297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN  376 (484)
T ss_pred             hhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC
Confidence            7789999999999999999999999999999999888889999999999999999995 66788874  58999999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEE--EcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLA--GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      ++..+...-..   ..|+.+.|++....+++  |..+..|.||+..+.+++..+.+|...|..++++|+|..+++|+.|.
T Consensus       377 ~g~~i~~vdtg---sQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DE  453 (484)
T KOG0305|consen  377 TGARIDSVDTG---SQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADE  453 (484)
T ss_pred             CCcEecccccC---CceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccC
Confidence            77665443332   35789999999866655  56677899999999889999999999999999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      ++++|+
T Consensus       454 Tlrfw~  459 (484)
T KOG0305|consen  454 TLRFWN  459 (484)
T ss_pred             cEEecc
Confidence            999996

>KOG0291|consensus

Probab=99.89  E-value=6.2e-22  Score=155.33  Aligned_cols=161  Identities=19%  Similarity=0.332  Sum_probs=137.3

Q ss_pred             cccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeCCCc-EEEeeC
Q psy15417         14 PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSDDAT-CRLFDI   91 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~~-i~iwd~   91 (176)
                      ..++.|+..|+.+.|+..++.+++.|-||+|+.||+..++.-++|..+. ....+++..|.|..+..|+.|.. |.+|++
T Consensus       386 vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~  465 (893)
T KOG0291|consen  386 VTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSV  465 (893)
T ss_pred             EEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEe
Confidence            3478899999999999999999999999999999999999888888753 44578888999999999999975 999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      .+++.+-..  .++..+|.++.|+|++..|+++++|.++|+||+-......+-..+...+..++|.|+|.-|+....||.
T Consensus       466 qTGqllDiL--sGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgq  543 (893)
T KOG0291|consen  466 QTGQLLDIL--SGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQ  543 (893)
T ss_pred             ecCeeeehh--cCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecce
Confidence            999876543  233357889999999999999999999999997655333333345667889999999999999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      |.+||
T Consensus       544 Itf~d  548 (893)
T KOG0291|consen  544 ITFFD  548 (893)
T ss_pred             EEEEE
Confidence            99997

>KOG0305|consensus

Probab=99.89  E-value=2.3e-22  Score=154.62  Aligned_cols=154  Identities=23%  Similarity=0.399  Sum_probs=137.9

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      +..|+++.|+++|.+|++|..+|.|.|||..+.+.++++.+ |...|-+++|.  ...+.+|+.|+.|..+|++..+...
T Consensus       217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~  294 (484)
T KOG0305|consen  217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV  294 (484)
T ss_pred             CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh
Confidence            78999999999999999999999999999999999999999 99999999997  7789999999999999999877654


Q ss_pred             EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC-CCEEEEc--cCCCcEEEe
Q psy15417         99 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED-GMAVATG--SWDSFLRIW  175 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~tg--~~d~~v~vw  175 (176)
                      . ....+...|+.+.|++|+.++++|+.|..+.|||....++...+..|...|.+++|+|- ...||+|  +.|++|++|
T Consensus       295 ~-~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fw  373 (484)
T KOG0305|consen  295 S-TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFW  373 (484)
T ss_pred             h-hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEE
Confidence            4 23334456888999999999999999999999999888888999999999999999995 5677876  469999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       374 n  374 (484)
T KOG0305|consen  374 N  374 (484)
T ss_pred             E
Confidence            7

>KOG0277|consensus

Probab=99.89  E-value=9.3e-22  Score=137.57  Aligned_cols=155  Identities=19%  Similarity=0.337  Sum_probs=128.1

Q ss_pred             ccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCC-eeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         20 TGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        20 ~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      +..+..++|+++. ..+++++.||++++||.... ..+..+++|...|.++.+.+. +..++++|+|++|++|+..-++.
T Consensus        60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S  139 (311)
T KOG0277|consen   60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS  139 (311)
T ss_pred             ccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcc
Confidence            4567789999864 57899999999999996532 467889999999999999985 67889999999999999876666


Q ss_pred             eeEEeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC-CCCEEEEccCCCcEEE
Q psy15417         97 LAMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-DGMAVATGSWDSFLRI  174 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~tg~~d~~v~v  174 (176)
                      +..+.  .+...|....|+|. ...+++++.|+++++||++..-....+..|+..+.|+.|+. +...++||+.|+.||+
T Consensus       140 v~Tf~--gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~  217 (311)
T KOG0277|consen  140 VQTFN--GHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRG  217 (311)
T ss_pred             eEeec--CCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEE
Confidence            65543  33456888999996 56889999999999999876544445889999999999985 4678899999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       218 wD  219 (311)
T KOG0277|consen  218 WD  219 (311)
T ss_pred             Ee
Confidence            97

>KOG0647|consensus

Probab=99.89  E-value=1.9e-21  Score=138.80  Aligned_cols=161  Identities=20%  Similarity=0.316  Sum_probs=127.3

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc--EEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW--AFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~--~l~s~s~d~~i~iwd~~   92 (176)
                      ....|.++|.+++|+.||..+++|+.|+.+++||+.+++ ...+..|.++|..+.|.+...  .|++||+|.+++.||.|
T Consensus        67 a~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R  145 (347)
T KOG0647|consen   67 AQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTR  145 (347)
T ss_pred             hhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccC
Confidence            455699999999999999999999999999999999995 667888999999999988765  89999999999999999


Q ss_pred             CCCeeeEEeecceE---------------------------------------eceEEEEECCCCcEEEEEcCCCeEEEE
Q psy15417         93 ADQELAMYSHDNII---------------------------------------CGITSVAFSRSGRLLLAGYDDFNCNVW  133 (176)
Q Consensus        93 ~~~~~~~~~~~~~~---------------------------------------~~v~~~~~~~~~~~l~~g~~d~~i~v~  133 (176)
                      +..++.....+...                                       -.+-+++..++...++.|+-+|.+.+.
T Consensus       146 ~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq  225 (347)
T KOG0647|consen  146 SSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQ  225 (347)
T ss_pred             CCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEE
Confidence            76554333222110                                       024567777777777888888888887


Q ss_pred             eCCCc--eeeeeecCCCc---------cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        134 DSMKT--ERAGILAGHDN---------RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       134 d~~~~--~~~~~~~~~~~---------~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .+...  +.-.++..|..         .|+.++|+|....|+|.|.||++-.||
T Consensus       226 ~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWD  279 (347)
T KOG0647|consen  226 YIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWD  279 (347)
T ss_pred             ecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEec
Confidence            76554  33334444531         367889999999999999999999997

>KOG0306|consensus

Probab=99.89  E-value=4.9e-22  Score=155.85  Aligned_cols=157  Identities=24%  Similarity=0.358  Sum_probs=130.1

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC-----
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD-----   94 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~-----   94 (176)
                      .+.+.+..|-|.+.++++|...|.+.++|+.+...+.+.++|++.+.+++..|+++.+++||.|.+|++||.+-.     
T Consensus       412 ~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~g  491 (888)
T KOG0306|consen  412 CGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPG  491 (888)
T ss_pred             cccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCc
Confidence            346777777777777777777777777777777777777799999999999999999999999999999996411     


Q ss_pred             CeeeEEe-----ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         95 QELAMYS-----HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        95 ~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      .......     .......+.++.++||+.+++++-.|.+++||-+.+-+....+-+|.-+|.|+.++|+++.++|||.|
T Consensus       492 t~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSAD  571 (888)
T KOG0306|consen  492 TQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSAD  571 (888)
T ss_pred             ccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCC
Confidence            1100011     11122468899999999999999999999999988888889999999999999999999999999999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      .+|+||.
T Consensus       572 KnVKiWG  578 (888)
T KOG0306|consen  572 KNVKIWG  578 (888)
T ss_pred             CceEEec
Confidence            9999993

>KOG0288|consensus

Probab=99.89  E-value=2.1e-22  Score=148.60  Aligned_cols=173  Identities=23%  Similarity=0.414  Sum_probs=130.3

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec-----------------CC---
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-----------------GH---   61 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-----------------~h---   61 (176)
                      +||.+...++.  .++||.+.|.++.|......+++|+.|+++|+||+.+..|.+++.                 +|   
T Consensus       245 ~Wnvd~~r~~~--TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~Dk  322 (459)
T KOG0288|consen  245 LWNVDSLRLRH--TLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDK  322 (459)
T ss_pred             eeeccchhhhh--hhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeeccccc
Confidence            35555555544  578999999999998776668889998888888887665544332                 11   


Q ss_pred             ------------------CCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecce--EeceEEEEECCCCcEE
Q psy15417         62 ------------------ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNI--ICGITSVAFSRSGRLL  121 (176)
Q Consensus        62 ------------------~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l  121 (176)
                                        .+.|+++..++++..+.+++.|.++++.|+++.+....+.-.+.  .+..+.+.|+|++.++
T Consensus       323 kvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~Yv  402 (459)
T KOG0288|consen  323 KVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYV  402 (459)
T ss_pred             ceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCcee
Confidence                              13566777777777777777777777777776655544432221  1346788999999999


Q ss_pred             EEEcCCCeEEEEeCCCceeeeeecCCC-c-cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        122 LAGYDDFNCNVWDSMKTERAGILAGHD-N-RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       122 ~~g~~d~~i~v~d~~~~~~~~~~~~~~-~-~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++|+.||.++||++.++++........ + .|.+++|.|.|.++++++.++.+.+|.
T Consensus       403 aAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  403 AAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             eeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            999999999999999988877665432 2 699999999999999999999999994

>KOG0300|consensus

Probab=99.89  E-value=4.2e-22  Score=143.51  Aligned_cols=160  Identities=23%  Similarity=0.370  Sum_probs=137.6

Q ss_pred             cccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         14 PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      ..++||.+.|.+++|-..++..+++++|++..+||+++++.+..+.||....+.++-+|..+++++++.|.+.++||.+.
T Consensus       266 ~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe  345 (481)
T KOG0300|consen  266 MRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE  345 (481)
T ss_pred             eeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchh
Confidence            35889999999999999999999999999999999999999999999999999999999999999999999999999983


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                       .....-.++.+...|+++.|..+ ..+++|+.|.++++||+..- .++.++.. ...++.++++..+..||.--++++|
T Consensus       346 -aI~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqv  422 (481)
T KOG0300|consen  346 -AIQSVAVFQGHTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQV  422 (481)
T ss_pred             -hcceeeeecccccceeEEEEecC-CceeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceE
Confidence             33334445666677889999865 45789999999999997653 34555542 3567888999988899999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      |+||
T Consensus       423 RlfD  426 (481)
T KOG0300|consen  423 RLFD  426 (481)
T ss_pred             EEEe
Confidence            9997

>KOG0299|consensus

Probab=99.89  E-value=4.8e-22  Score=148.31  Aligned_cols=154  Identities=19%  Similarity=0.458  Sum_probs=133.0

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      +|...+.+++.++|+++|++|+.|..|.||+.++.+.++.+++|.+.|.+++|......+++++.|+++++|++.....+
T Consensus       200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~v  279 (479)
T KOG0299|consen  200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYV  279 (479)
T ss_pred             cccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHH
Confidence            89999999999999999999999999999999999999999999999999999998889999999999999998754332


Q ss_pred             -eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417         98 -AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus        98 -~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                       ..|+++.   .|..+......+.+-+|..|+++++|++ ..+....+.++.+.+.|++|..+. .+++||.||.|.+|+
T Consensus       280 etlyGHqd---~v~~IdaL~reR~vtVGgrDrT~rlwKi-~eesqlifrg~~~sidcv~~In~~-HfvsGSdnG~IaLWs  354 (479)
T KOG0299|consen  280 ETLYGHQD---GVLGIDALSRERCVTVGGRDRTVRLWKI-PEESQLIFRGGEGSIDCVAFINDE-HFVSGSDNGSIALWS  354 (479)
T ss_pred             HHHhCCcc---ceeeechhcccceEEeccccceeEEEec-cccceeeeeCCCCCeeeEEEeccc-ceeeccCCceEEEee
Confidence             2445543   5666766667788888889999999998 445556677888899999999764 567999999999995

>KOG0270|consensus

Probab=99.89  E-value=7.3e-22  Score=146.80  Aligned_cols=159  Identities=26%  Similarity=0.423  Sum_probs=136.6

Q ss_pred             ccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~   92 (176)
                      ..+||+..|..+.|... ...|++||.|.+|++||+.++++..++..|...|.+++|+|. +..|++|+.|+++.+.|.|
T Consensus       238 ~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R  317 (463)
T KOG0270|consen  238 SASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCR  317 (463)
T ss_pred             ccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeecc
Confidence            34689999999999775 458999999999999999999999999999999999999996 6789999999999999999


Q ss_pred             CCCee-eEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCC-CCEEEEccC
Q psy15417         93 ADQEL-AMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTED-GMAVATGSW  168 (176)
Q Consensus        93 ~~~~~-~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~-~~~l~tg~~  168 (176)
                      ..... ..+.+...   |-.++|+|.. ..++++..||+++-+|++.. +++.++.+|.+.|+++++.+. ...++|++.
T Consensus       318 ~~~~s~~~wk~~g~---VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~  394 (463)
T KOG0270|consen  318 DPSNSGKEWKFDGE---VEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTAST  394 (463)
T ss_pred             CccccCceEEeccc---eEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccc
Confidence            64433 35566553   4568888865 57888999999999998764 889999999999999999865 457899999


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      |+.|++|+
T Consensus       395 d~~Vklw~  402 (463)
T KOG0270|consen  395 DKVVKLWK  402 (463)
T ss_pred             cceEEEEe
Confidence            99999995

>KOG0301|consensus

Probab=99.88  E-value=2.7e-21  Score=150.41  Aligned_cols=151  Identities=25%  Similarity=0.455  Sum_probs=125.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||+..|+++.+-|.+ .++|||.|++|++|+-  +++.++|.+|+..|+++++.++. .|+|++.||.|++|++..+
T Consensus       135 ~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~ge  210 (745)
T KOG0301|consen  135 SLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDGE  210 (745)
T ss_pred             ccCCcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEeccCc
Confidence            478999999999998877 8889999999999986  67899999999999999999866 6999999999999999544


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      .....+.+..   -+.+++..++...++++++|+++++|+..  ++...+.-....|+++.+.++|.. ++|+.||.|||
T Consensus       211 ~l~~~~ghtn---~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDI-vvg~SDG~VrV  284 (745)
T KOG0301|consen  211 VLLEMHGHTN---FVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDI-VVGGSDGRVRV  284 (745)
T ss_pred             eeeeeeccce---EEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCE-EEeccCceEEE
Confidence            4444444544   35667755677889999999999999865  566666545568999999998875 58889999999


Q ss_pred             e
Q psy15417        175 W  175 (176)
Q Consensus       175 w  175 (176)
                      |
T Consensus       285 f  285 (745)
T KOG0301|consen  285 F  285 (745)
T ss_pred             E
Confidence            8

>KOG0299|consensus

Probab=99.88  E-value=2e-21  Score=145.00  Aligned_cols=157  Identities=25%  Similarity=0.464  Sum_probs=131.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||++.|.+++|-.+..-|++++.|++|++|+++....+.++.+|+..|.++.-..-.+.+-.|+.|+++++|.+..+
T Consensus       239 ~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ee  318 (479)
T KOG0299|consen  239 VFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEE  318 (479)
T ss_pred             cccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEecccc
Confidence            47899999999999988889999999999999999988888999999999999988777777777779999999999666


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-CC-----------CccEEEEEEeCCCCE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-GH-----------DNRVSCLGVTEDGMA  162 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-~~-----------~~~i~~~~~~~~~~~  162 (176)
                      ..+...+...   .+.|++|- +...|++|+.+|.|.+|++.+.+++.+.. +|           +.+|++++..|...+
T Consensus       319 sqlifrg~~~---sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL  394 (479)
T KOG0299|consen  319 SQLIFRGGEG---SIDCVAFI-NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDL  394 (479)
T ss_pred             ceeeeeCCCC---CeeeEEEe-cccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCce
Confidence            5554444432   45567665 45789999999999999988877665432 22           238999999999999


Q ss_pred             EEEccCCCcEEEe
Q psy15417        163 VATGSWDSFLRIW  175 (176)
Q Consensus       163 l~tg~~d~~v~vw  175 (176)
                      +|+|+++|+||+|
T Consensus       395 ~asGS~~G~vrLW  407 (479)
T KOG0299|consen  395 LASGSWSGCVRLW  407 (479)
T ss_pred             EEecCCCCceEEE
Confidence            9999999999999

>KOG0310|consensus

Probab=99.88  E-value=2.9e-21  Score=145.01  Aligned_cols=155  Identities=17%  Similarity=0.307  Sum_probs=129.3

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      .-...|.+++|-.||++|+.|...|.|+++|..+...++.+.+|+.+|..+.|+|. +..|++|++|+.+++||+.+...
T Consensus        66 rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v  145 (487)
T KOG0310|consen   66 RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV  145 (487)
T ss_pred             hhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE
Confidence            45678999999999999999999999999998776678899999999999999996 56788888899999999976543


Q ss_pred             eeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                        ......+...|-+.+++|.. .++++|+.||+|++||.... ..+.++ .|..+|..+.+.|.|..||+++-. .|||
T Consensus       146 --~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgGn-~vkV  221 (487)
T KOG0310|consen  146 --QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGGN-SVKV  221 (487)
T ss_pred             --EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCCC-eEEE
Confidence              33344444567788999864 58999999999999998765 344444 588899999999999999998754 8999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       222 WD  223 (487)
T KOG0310|consen  222 WD  223 (487)
T ss_pred             EE
Confidence            97

>KOG0274|consensus

Probab=99.88  E-value=1.8e-21  Score=153.50  Aligned_cols=164  Identities=25%  Similarity=0.421  Sum_probs=134.0

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS   81 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s   81 (176)
                      +|+++.++.+.  .+.||.++|.++..+  +.++++|+.|++|++||+.+++++.++.+|+..|.++.+.+. ..+++|+
T Consensus       315 VW~v~n~~~l~--l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs  389 (537)
T KOG0274|consen  315 VWDVTNGACLN--LLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGS  389 (537)
T ss_pred             EEeccCcceEE--EeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeee
Confidence            34454455544  345699999999987  889999999999999999999999999999999999988665 8999999


Q ss_pred             CCCcEEEeeCCCC-CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC-CCccEEEEEEeCC
Q psy15417         82 DDATCRLFDIRAD-QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG-HDNRVSCLGVTED  159 (176)
Q Consensus        82 ~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~  159 (176)
                      .|++|++||+++. +.+..+..  +..-++.+.  ..+..++++..|++|++||.+.+++...+.+ |...+.++++.  
T Consensus       390 ~D~~IkvWdl~~~~~c~~tl~~--h~~~v~~l~--~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--  463 (537)
T KOG0274|consen  390 LDTTIKVWDLRTKRKCIHTLQG--HTSLVSSLL--LRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--  463 (537)
T ss_pred             eccceEeecCCchhhhhhhhcC--Ccccccccc--cccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC--
Confidence            9999999999987 55444332  222233333  3678999999999999999999999999888 66788887776  


Q ss_pred             CCEEEEccCCCcEEEeC
Q psy15417        160 GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       160 ~~~l~tg~~d~~v~vwd  176 (176)
                      ...+++++.|+.+++||
T Consensus       464 ~~~il~s~~~~~~~l~d  480 (537)
T KOG0274|consen  464 KEEILCSSDDGSVKLWD  480 (537)
T ss_pred             cceEEEEecCCeeEEEe
Confidence            45778999999999997

>KOG2096|consensus

Probab=99.87  E-value=9.8e-21  Score=136.34  Aligned_cols=158  Identities=24%  Similarity=0.351  Sum_probs=123.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe------------------------------------eeeEec
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS------------------------------------CKQTFP   59 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~------------------------------------~~~~~~   59 (176)
                      +.||.+.|++++|+.||++|+|++.|++|++|+++.-+                                    .++.++
T Consensus        82 LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk  161 (420)
T KOG2096|consen   82 LKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYK  161 (420)
T ss_pred             hhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEE
Confidence            57999999999999999999999999999999965210                                    011110


Q ss_pred             -----------------------CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC
Q psy15417         60 -----------------------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR  116 (176)
Q Consensus        60 -----------------------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~  116 (176)
                                             .|...+.++.....++++.+++.|..|.+|+++ ++.+.......  ..-...+++|
T Consensus       162 ~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq--~~n~~aavSP  238 (420)
T KOG2096|consen  162 LVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQ--SSNYDAAVSP  238 (420)
T ss_pred             eeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccc--ccccceeeCC
Confidence                                   244556666666778899999999999999998 66654433221  2334578899


Q ss_pred             CCcEEEEEcCCCeEEEEeCCC--------ceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        117 SGRLLLAGYDDFNCNVWDSMK--------TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       117 ~~~~l~~g~~d~~i~v~d~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +|+++++++-.--+++|..--        ......+.+|...|..++|+++...++|.|.||+.||||
T Consensus       239 ~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwd  306 (420)
T KOG2096|consen  239 DGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWD  306 (420)
T ss_pred             CCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEee
Confidence            999999988888899997321        124556789999999999999999999999999999997

>KOG0973|consensus

Probab=99.87  E-value=7.8e-21  Score=153.70  Aligned_cols=158  Identities=22%  Similarity=0.363  Sum_probs=128.9

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC------------------CeeeeEecCCCCCeeEEEEccCCcEEE
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD------------------GSCKQTFPGHESDINAVTFFPNGWAFA   78 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~------------------~~~~~~~~~h~~~v~~v~~~~~~~~l~   78 (176)
                      .-|.+.|+|+.|+|||++||+||.|+.|.+|+...                  -++...+.+|+..|..++|+|++.+|+
T Consensus        66 ~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lv  145 (942)
T KOG0973|consen   66 DDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLV  145 (942)
T ss_pred             ccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEE
Confidence            35999999999999999999999999999999872                  136778999999999999999999999


Q ss_pred             EeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce-------------------
Q psy15417         79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE-------------------  139 (176)
Q Consensus        79 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~-------------------  139 (176)
                      ++|.|++|.+||.++.+.+...  ..+...|-.+.|.|-|++|++-+.|++++||......                   
T Consensus       146 S~s~DnsViiwn~~tF~~~~vl--~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~  223 (942)
T KOG0973|consen  146 SVSLDNSVIIWNAKTFELLKVL--RGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFL  223 (942)
T ss_pred             EecccceEEEEccccceeeeee--ecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceee
Confidence            9999999999999987555443  2333445578999999999999999999999832211                   


Q ss_pred             ---------------------------------eeeeecCCCccEEEEEEeCC-----CC------------EEEEccCC
Q psy15417        140 ---------------------------------RAGILAGHDNRVSCLGVTED-----GM------------AVATGSWD  169 (176)
Q Consensus       140 ---------------------------------~~~~~~~~~~~i~~~~~~~~-----~~------------~l~tg~~d  169 (176)
                                                       ....+.+|..++.++.|.|.     ..            .+|+||.|
T Consensus       224 RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqD  303 (942)
T KOG0973|consen  224 RLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQD  303 (942)
T ss_pred             ecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCC
Confidence                                             12234688889999999762     11            57899999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      +++.||.
T Consensus       304 rSlSVW~  310 (942)
T KOG0973|consen  304 RSLSVWN  310 (942)
T ss_pred             ccEEEEe
Confidence            9999994

>KOG0294|consensus

Probab=99.87  E-value=1.1e-20  Score=135.58  Aligned_cols=131  Identities=22%  Similarity=0.314  Sum_probs=113.7

Q ss_pred             ccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc--EEEEeeC
Q psy15417          5 LDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW--AFATGSD   82 (176)
Q Consensus         5 ~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~--~l~s~s~   82 (176)
                      ..++-++..+.++.|.+.+++++.+  +.++++|+.|.+|++||+++......+..|.+.++++.|.+...  +|++|+.
T Consensus        28 s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sd  105 (362)
T KOG0294|consen   28 SVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSD  105 (362)
T ss_pred             ccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecC
Confidence            3567778888899999999999975  89999999999999999999988889999999999999998754  8999999


Q ss_pred             CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce
Q psy15417         83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE  139 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~  139 (176)
                      ||.|.+|+..+...+..+  ..+...|+.+++||.+.+.++-+.|+.++.||+.+++
T Consensus       106 DG~i~iw~~~~W~~~~sl--K~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr  160 (362)
T KOG0294|consen  106 DGHIIIWRVGSWELLKSL--KAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGR  160 (362)
T ss_pred             CCcEEEEEcCCeEEeeee--cccccccceeEecCCCceEEEEcCCceeeeehhhcCc
Confidence            999999999877554433  2333458999999999999999999999999987664

>KOG1273|consensus

Probab=99.87  E-value=7.7e-21  Score=136.63  Aligned_cols=154  Identities=15%  Similarity=0.223  Sum_probs=129.8

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEee
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH  102 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~  102 (176)
                      ..|+.|++.|.+|++|..||.|.+||+.|....+.+.+|..+|++++|+++|+.|+++|.|..+++||+..+..+..+.+
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf  105 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF  105 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence            67999999999999999999999999999888889999999999999999999999999999999999988765544333


Q ss_pred             cceEe----------------------------c----------------eEEEEECCCCcEEEEEcCCCeEEEEeCCCc
Q psy15417        103 DNIIC----------------------------G----------------ITSVAFSRSGRLLLAGYDDFNCNVWDSMKT  138 (176)
Q Consensus       103 ~~~~~----------------------------~----------------v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~  138 (176)
                      ...+.                            +                ..+..|++.|.++++|...|.+.++|.++.
T Consensus       106 ~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~  185 (405)
T KOG1273|consen  106 DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL  185 (405)
T ss_pred             cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence            21110                            0                112237788999999999999999999998


Q ss_pred             eeeeeecCCC-ccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        139 ERAGILAGHD-NRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       139 ~~~~~~~~~~-~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++..+.--. ..|..+.|+..|..|+.-+.|+.||.|+
T Consensus       186 e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye  224 (405)
T KOG1273|consen  186 ECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYE  224 (405)
T ss_pred             eeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEe
Confidence            8877765443 5677888999999999999999999985

>KOG4283|consensus

Probab=99.87  E-value=8.4e-21  Score=135.47  Aligned_cols=157  Identities=27%  Similarity=0.383  Sum_probs=130.9

Q ss_pred             CCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCe----------eee-----EecCCCCCeeEEEEccC-CcEEEE
Q psy15417         17 SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGS----------CKQ-----TFPGHESDINAVTFFPN-GWAFAT   79 (176)
Q Consensus        17 ~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~----------~~~-----~~~~h~~~v~~v~~~~~-~~~l~s   79 (176)
                      .-|.+.|+.+++.+ .|+++++|+.||.+.+||+++..          .++     .-.+|...|.++.|.|- .-.|.+
T Consensus        40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts  119 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS  119 (397)
T ss_pred             ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence            35899999999987 68899999999999999997542          111     12358889999999994 447888


Q ss_pred             eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCC---CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417         80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS---GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV  156 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~  156 (176)
                      ++.|.++++||..+.|....|..+..   |.+-+++|-   ..++++|..+-++++-|+..+....++.+|.+.|.++.|
T Consensus       120 sSFDhtlKVWDtnTlQ~a~~F~me~~---VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~W  196 (397)
T KOG4283|consen  120 SSFDHTLKVWDTNTLQEAVDFKMEGK---VYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEW  196 (397)
T ss_pred             ccccceEEEeecccceeeEEeecCce---eehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEe
Confidence            99999999999998888777776643   445556553   467888999999999999999999999999999999999


Q ss_pred             eCCCCE-EEEccCCCcEEEeC
Q psy15417        157 TEDGMA-VATGSWDSFLRIWN  176 (176)
Q Consensus       157 ~~~~~~-l~tg~~d~~v~vwd  176 (176)
                      +|...+ |++|+.||.||+||
T Consensus       197 sp~~e~vLatgsaDg~irlWD  217 (397)
T KOG4283|consen  197 SPSSEWVLATGSADGAIRLWD  217 (397)
T ss_pred             ccCceeEEEecCCCceEEEEE
Confidence            998776 68999999999997

>KOG0303|consensus

Probab=99.87  E-value=7.1e-21  Score=140.14  Aligned_cols=168  Identities=20%  Similarity=0.343  Sum_probs=137.9

Q ss_pred             cccccCCCcc-cCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC-------eeeeEecCCCCCeeEEEEccC-Cc
Q psy15417          6 DKSALLGSPA-ASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPN-GW   75 (176)
Q Consensus         6 ~~~~~~~~~~-~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~-~~   75 (176)
                      +++++-..++ ..||+++|..++|+| +...+++||.|-+|++|++..+       +.+..+.+|...|.-++|+|. .+
T Consensus        66 k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~N  145 (472)
T KOG0303|consen   66 KTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPN  145 (472)
T ss_pred             cccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchh
Confidence            3444444444 469999999999999 6679999999999999998754       346688899999999999997 56


Q ss_pred             EEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEE
Q psy15417         76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCL  154 (176)
Q Consensus        76 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~  154 (176)
                      .|++++.|.+|.+||+.+++.+....++   .-|.++.|+.+|..+++.+.|+.|||||..+++.+..-.+|.+ +-..+
T Consensus       146 VLlsag~Dn~v~iWnv~tgeali~l~hp---d~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Ra  222 (472)
T KOG0303|consen  146 VLLSAGSDNTVSIWNVGTGEALITLDHP---DMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARA  222 (472)
T ss_pred             hHhhccCCceEEEEeccCCceeeecCCC---CeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCccee
Confidence            8999999999999999998876654443   3578999999999999999999999999999999888888866 33445


Q ss_pred             EEeCCCCEEEEcc---CCCcEEEeC
Q psy15417        155 GVTEDGMAVATGS---WDSFLRIWN  176 (176)
Q Consensus       155 ~~~~~~~~l~tg~---~d~~v~vwd  176 (176)
                      -|..++..+.||.   .++++.+||
T Consensus       223 ifl~~g~i~tTGfsr~seRq~aLwd  247 (472)
T KOG0303|consen  223 IFLASGKIFTTGFSRMSERQIALWD  247 (472)
T ss_pred             EEeccCceeeeccccccccceeccC
Confidence            6778888666663   377888986

>KOG0973|consensus

Probab=99.87  E-value=5.9e-21  Score=154.39  Aligned_cols=161  Identities=23%  Similarity=0.367  Sum_probs=136.9

Q ss_pred             cCCCcc-CeEEEEEcCCCCEEEEEe--CCCeEEEEEcCC------------CeeeeEecCCCCCeeEEEEccCCcEEEEe
Q psy15417         16 ASGHTG-DVMSLSLAPDMRTFVSGA--CDASAKLWDIRD------------GSCKQTFPGHESDINAVTFFPNGWAFATG   80 (176)
Q Consensus        16 ~~gh~~-~V~~~~~~~~~~~l~s~s--~dg~v~~wd~~~------------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~   80 (176)
                      ..+|.+ .|.+++.+|++..++||+  .|+.+.+|+...            .+.+.++..|.++|+|+.|+|||.+||+|
T Consensus         8 wv~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsG   87 (942)
T KOG0973|consen    8 WVNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASG   87 (942)
T ss_pred             ccccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeec
Confidence            445665 589999999999999999  899999998642            23456777899999999999999999999


Q ss_pred             eCCCcEEEeeCCC-----------CC-ee----eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee
Q psy15417         81 SDDATCRLFDIRA-----------DQ-EL----AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL  144 (176)
Q Consensus        81 s~d~~i~iwd~~~-----------~~-~~----~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~  144 (176)
                      |+|+.|.+|+-..           +. ..    .......+...|..+.|+|++.++++++.|.++.+||..+.+.+..+
T Consensus        88 SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl  167 (942)
T KOG0973|consen   88 SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVL  167 (942)
T ss_pred             cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeee
Confidence            9999999998652           00 00    11123344567889999999999999999999999999999999999


Q ss_pred             cCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        145 AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       145 ~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .+|...|-.+.|.|-|+|||+=++|++|+||+
T Consensus       168 ~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwr  199 (942)
T KOG0973|consen  168 RGHQSLVKGVSWDPIGKYFASQSDDRTLKVWR  199 (942)
T ss_pred             ecccccccceEECCccCeeeeecCCceEEEEE
Confidence            99999999999999999999999999999995

>KOG1332|consensus

Probab=99.87  E-value=3.2e-21  Score=134.22  Aligned_cols=162  Identities=19%  Similarity=0.320  Sum_probs=133.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---eeeeEecCCCCCeeEEEEc-c-CCcEEEEeeCCCcEEEe
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG---SCKQTFPGHESDINAVTFF-P-NGWAFATGSDDATCRLF   89 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~-~-~~~~l~s~s~d~~i~iw   89 (176)
                      ..++|+..|..+...--|+.|+||+.|++|||+..+++   +++.++.+|.+||.-++|. | -|..|++++.||.+-||
T Consensus         6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiW   85 (299)
T KOG1332|consen    6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIW   85 (299)
T ss_pred             hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEE
Confidence            45679999998887778999999999999999999765   4678999999999999995 4 59999999999999999


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCc---eeeeeecCCCccEEEEEEeCC---C-
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKT---ERAGILAGHDNRVSCLGVTED---G-  160 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~---~-  160 (176)
                      .-..+.=...+.+..+...+++++|-|.  |-.|++++.||.|.|.+....   .......+|...++++++.|.   | 
T Consensus        86 ke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~  165 (299)
T KOG1332|consen   86 KEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGS  165 (299)
T ss_pred             ecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcc
Confidence            8655532233445556678999999887  568999999999999876543   234456689999999999886   3 


Q ss_pred             ----------CEEEEccCCCcEEEeC
Q psy15417        161 ----------MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 ----------~~l~tg~~d~~v~vwd  176 (176)
                                ..|++|+-|..|+||+
T Consensus       166 ~~~~~~~~~~krlvSgGcDn~VkiW~  191 (299)
T KOG1332|consen  166 LVDQGPAAKVKRLVSGGCDNLVKIWK  191 (299)
T ss_pred             ccccCcccccceeeccCCccceeeee
Confidence                      4599999999999995

>KOG0300|consensus

Probab=99.87  E-value=2.7e-21  Score=139.43  Aligned_cols=161  Identities=22%  Similarity=0.477  Sum_probs=138.3

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee-----
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD-----   90 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd-----   90 (176)
                      +.||...|+.++.......+.+++.|.+.++|-+++++|+.++.||.++|++++|++.+.++++++.|++..||.     
T Consensus       144 ~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~  223 (481)
T KOG0300|consen  144 LEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNW  223 (481)
T ss_pred             hcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcC
Confidence            579999999999888778999999999999999999999999999999999999999999999999999999996     


Q ss_pred             -CCCC---------Ce---------------------ee--EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417         91 -IRAD---------QE---------------------LA--MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus        91 -~~~~---------~~---------------------~~--~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~  137 (176)
                       ..++         ++                     +.  +..+..+...|.+..|-..+..+++++.|.+..+||+++
T Consensus       224 ~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEt  303 (481)
T KOG0300|consen  224 EVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVET  303 (481)
T ss_pred             cCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeecc
Confidence             2110         00                     00  001112223456677777889999999999999999999


Q ss_pred             ceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       138 ~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++++..+.+|......++-+|....+++.+.|.+.|+||
T Consensus       304 ge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWD  342 (481)
T KOG0300|consen  304 GEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWD  342 (481)
T ss_pred             CceeccccCcchhccccccCCcceEEEEeccCceeEecc
Confidence            999999999999999889999999999999999999998

>KOG0647|consensus

Probab=99.86  E-value=1.9e-20  Score=133.75  Aligned_cols=152  Identities=17%  Similarity=0.362  Sum_probs=118.2

Q ss_pred             CccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCC-Ceee-eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         19 HTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRD-GSCK-QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        19 h~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~-~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      -+..|.+++|||. ..+++++|+|++|++|+++. |... +....|.++|.+++|+.+|.++++|+.|+.+++||+.+++
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q  105 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ  105 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC
Confidence            4678999999994 45666999999999999976 3332 3445689999999999999999999999999999999997


Q ss_pred             eeeEEeecceEeceEEEEECCCC--cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSG--RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~--~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      ....-.+..   +|-++.|-+..  ..|++|+.|++++.||.+...++.++. ..+++.++.+...  +++.+..++.|.
T Consensus       106 ~~~v~~Hd~---pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~~p--m~vVata~r~i~  179 (347)
T KOG0647|consen  106 VSQVAAHDA---PVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVLYP--MAVVATAERHIA  179 (347)
T ss_pred             eeeeeeccc---ceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhccCc--eeEEEecCCcEE
Confidence            655544543   45566665554  488999999999999988777766654 3467777766543  555666677888


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      +|+
T Consensus       180 vyn  182 (347)
T KOG0647|consen  180 VYN  182 (347)
T ss_pred             EEE
Confidence            774

>KOG0302|consensus

Probab=99.86  E-value=9.9e-21  Score=138.62  Aligned_cols=155  Identities=26%  Similarity=0.440  Sum_probs=119.0

Q ss_pred             cccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCC---eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         14 PAASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDG---SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      .++.||+..|..++|||.. .+|++||.||+|+|||++++   .++. .+.|.+-|+-+.|+..-..|++|++||+++||
T Consensus       251 ~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kAh~sDVNVISWnr~~~lLasG~DdGt~~iw  329 (440)
T KOG0302|consen  251 RPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-TKAHNSDVNVISWNRREPLLASGGDDGTLSIW  329 (440)
T ss_pred             ccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-eeccCCceeeEEccCCcceeeecCCCceEEEE
Confidence            3678999999999999964 58999999999999999988   3343 38899999999999887799999999999999


Q ss_pred             eCCC---CCeeeEEeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCce----------------eeeeecCCC-
Q psy15417         90 DIRA---DQELAMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTE----------------RAGILAGHD-  148 (176)
Q Consensus        90 d~~~---~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~----------------~~~~~~~~~-  148 (176)
                      |+|.   ++.++.|.+  +..+|+++.|+|. ...+++++.|.+|.+||+....                +...+.-|. 
T Consensus       330 DLR~~~~~~pVA~fk~--Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqG  407 (440)
T KOG0302|consen  330 DLRQFKSGQPVATFKY--HKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQG  407 (440)
T ss_pred             EhhhccCCCcceeEEe--ccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecc
Confidence            9975   345555543  3468999999996 4678888999999999953210                111122242 


Q ss_pred             -ccEEEEEEeCC-CCEEEEccCCCc
Q psy15417        149 -NRVSCLGVTED-GMAVATGSWDSF  171 (176)
Q Consensus       149 -~~i~~~~~~~~-~~~l~tg~~d~~  171 (176)
                       ..+--+.|+++ ..+|++.+.||.
T Consensus       408 Qke~KevhWH~QiPG~lvsTa~dGf  432 (440)
T KOG0302|consen  408 QKEVKEVHWHRQIPGLLVSTAIDGF  432 (440)
T ss_pred             hhHhhhheeccCCCCeEEEecccce
Confidence             34667788876 356777777774

>KOG0267|consensus

Probab=99.86  E-value=8.7e-22  Score=153.86  Aligned_cols=164  Identities=24%  Similarity=0.414  Sum_probs=145.3

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS   81 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s   81 (176)
                      +|+++...++.  -++||...+..++|+|-+.++++|+.|...++||.+...|...+.+|...|..+.|.|+|.++++++
T Consensus        96 ~wDleeAk~vr--tLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~  173 (825)
T KOG0267|consen   96 VWDLEEAKIVR--TLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGG  173 (825)
T ss_pred             eeehhhhhhhh--hhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccC
Confidence            36676666655  5889999999999999999999999999999999998889999999999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC
Q psy15417         82 DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM  161 (176)
Q Consensus        82 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  161 (176)
                      .|.++++||+..++....|.  .+.+.++++.|||....++.|+.|+++++||+++.+.+.........|.+++|.|++.
T Consensus       174 ed~tvki~d~~agk~~~ef~--~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~  251 (825)
T KOG0267|consen  174 EDNTVKIWDLTAGKLSKEFK--SHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGK  251 (825)
T ss_pred             Ccceeeeecccccccccccc--cccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCce
Confidence            99999999998877665554  3345788999999999999999999999999999888888777788999999999999


Q ss_pred             EEEEccCC
Q psy15417        162 AVATGSWD  169 (176)
Q Consensus       162 ~l~tg~~d  169 (176)
                      .+++|-.+
T Consensus       252 ~~~~G~q~  259 (825)
T KOG0267|consen  252 IVLSGEQI  259 (825)
T ss_pred             eeecCchh
Confidence            88888554

>KOG0275|consensus

Probab=99.86  E-value=1.8e-21  Score=140.72  Aligned_cols=160  Identities=22%  Similarity=0.373  Sum_probs=139.5

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      ..|+..|.|+.|+.|+..+++++.|.++++--+.+|+++..|++|++-|+...|.++|+++++++.||++++|+.++.+.
T Consensus       303 rAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC  382 (508)
T KOG0275|consen  303 RAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTEC  382 (508)
T ss_pred             hhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhh
Confidence            36999999999999999999999999999999999999999999999999999999999999999999999999887654


Q ss_pred             eeEEeecc----------------e--Ee---------------------------ceEEEEECCCCcEEEEEcCCCeEE
Q psy15417         97 LAMYSHDN----------------I--IC---------------------------GITSVAFSRSGRLLLAGYDDFNCN  131 (176)
Q Consensus        97 ~~~~~~~~----------------~--~~---------------------------~v~~~~~~~~~~~l~~g~~d~~i~  131 (176)
                      +..+....                +  .|                           ..-+...+|.|.++.+.++|+.++
T Consensus       383 ~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlY  462 (508)
T KOG0275|consen  383 LSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLY  462 (508)
T ss_pred             hhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEE
Confidence            33222110                0  00                           122456789999999999999999


Q ss_pred             EEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        132 VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       132 v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      -|...+++...++.-|+..+..++-+|..+.||+=+.||.+++|.
T Consensus       463 CF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  463 CFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             EEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            999999999999999999999999999999999999999999994

>KOG0639|consensus

Probab=99.86  E-value=1.1e-20  Score=142.95  Aligned_cols=158  Identities=21%  Similarity=0.410  Sum_probs=130.5

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eeeEe--cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTF--PGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~~~--~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .|-+.|-++.+|...++++||+ .|-||+||+....   .+..+  .....-++++.++|+|+.|++|+.-.++.|||+-
T Consensus       417 ~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA  495 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA  495 (705)
T ss_pred             ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence            4777788889999999999998 5679999996432   12222  2234568999999999999999999999999997


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      .+.....-+.......+..++.+||.++++++..||.|.|||+.....+..+.+|.+.+.|+.++++|..|.||+-|.+|
T Consensus       496 apTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntv  575 (705)
T KOG0639|consen  496 APTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTV  575 (705)
T ss_pred             CCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccce
Confidence            66543333333322345678899999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      |-||
T Consensus       576 RcWD  579 (705)
T KOG0639|consen  576 RCWD  579 (705)
T ss_pred             eehh
Confidence            9997

>KOG0308|consensus

Probab=99.85  E-value=4.8e-20  Score=142.77  Aligned_cols=157  Identities=20%  Similarity=0.280  Sum_probs=137.6

Q ss_pred             cCCCccCeEEEEE-cCCCCEEEEEeCCCeEEEEEcCCCee----------eeEec-CCCCCeeEEEEccCCcEEEEeeCC
Q psy15417         16 ASGHTGDVMSLSL-APDMRTFVSGACDASAKLWDIRDGSC----------KQTFP-GHESDINAVTFFPNGWAFATGSDD   83 (176)
Q Consensus        16 ~~gh~~~V~~~~~-~~~~~~l~s~s~dg~v~~wd~~~~~~----------~~~~~-~h~~~v~~v~~~~~~~~l~s~s~d   83 (176)
                      +..|...|.|+++ -++..++++|+-|+.|++||++++..          ...+. |+..+|.+++..+.+..+++|+..
T Consensus       113 ir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgte  192 (735)
T KOG0308|consen  113 IRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTE  192 (735)
T ss_pred             hhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcc
Confidence            4569999999999 78888999999999999999997722          22333 788899999999999999999999


Q ss_pred             CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE
Q psy15417         84 ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        84 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  163 (176)
                      +.+++||.++.+.+....  .+...|-.+..++||+.+++++.||+|++||+..++++.++..|...++++..+|+-..+
T Consensus       193 k~lr~wDprt~~kimkLr--GHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~v  270 (735)
T KOG0308|consen  193 KDLRLWDPRTCKKIMKLR--GHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHV  270 (735)
T ss_pred             cceEEeccccccceeeee--ccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceE
Confidence            999999999887765443  344567788899999999999999999999999999999999999999999999998999


Q ss_pred             EEccCCCcEEE
Q psy15417        164 ATGSWDSFLRI  174 (176)
Q Consensus       164 ~tg~~d~~v~v  174 (176)
                      .+|+.||.|..
T Consensus       271 YsG~rd~~i~~  281 (735)
T KOG0308|consen  271 YSGGRDGNIYR  281 (735)
T ss_pred             EecCCCCcEEe
Confidence            99999998863

>KOG0288|consensus

Probab=99.85  E-value=5.1e-21  Score=141.35  Aligned_cols=162  Identities=23%  Similarity=0.357  Sum_probs=131.3

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.|..+.|+.++|.++++++++++.|+.+++|++.+.+...++.+|+..|+++.|......+++++.|.+|+.||+...
T Consensus       214 tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~  293 (459)
T KOG0288|consen  214 TLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKA  293 (459)
T ss_pred             hhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhh
Confidence            46788899999999999999999999999999999999999999999999999999877666999999999999997542


Q ss_pred             Ce----------------------------eeEEeec--------ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc
Q psy15417         95 QE----------------------------LAMYSHD--------NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT  138 (176)
Q Consensus        95 ~~----------------------------~~~~~~~--------~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~  138 (176)
                      ..                            +..+...        .....|+++..++++..+++.+.|-++.+.|+.+.
T Consensus       294 ~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~  373 (459)
T KOG0288|consen  294 YCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTK  373 (459)
T ss_pred             heeccccccccccceEecceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccc
Confidence            11                            0111000        00124788888899988888889999999998777


Q ss_pred             eeeeeecCCCc----cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        139 ERAGILAGHDN----RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       139 ~~~~~~~~~~~----~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +....+.+...    ..+.+.|+|++.|+|+||.||.|+||+
T Consensus       374 eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~  415 (459)
T KOG0288|consen  374 EIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWS  415 (459)
T ss_pred             cEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEE
Confidence            76666554322    257788999999999999999999995

>KOG0641|consensus

Probab=99.85  E-value=2e-19  Score=124.54  Aligned_cols=160  Identities=28%  Similarity=0.449  Sum_probs=135.2

Q ss_pred             CcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--C-----CCCeeEEEEccCCcEEEEeeCCCc
Q psy15417         13 SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--H-----ESDINAVTFFPNGWAFATGSDDAT   85 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--h-----~~~v~~v~~~~~~~~l~s~s~d~~   85 (176)
                      -+.++||.+.|.++ ++-++.++++|+.|.+|++||++-+.+++++..  |     .+.|.+++..|.|++|++|-.|..
T Consensus       176 ~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dss  254 (350)
T KOG0641|consen  176 FHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSS  254 (350)
T ss_pred             ceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCc
Confidence            34578999999877 577899999999999999999998888877642  2     367999999999999999999999


Q ss_pred             EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC----ceeeeeecCCCccEEEEEEeCCCC
Q psy15417         86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK----TERAGILAGHDNRVSCLGVTEDGM  161 (176)
Q Consensus        86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~----~~~~~~~~~~~~~i~~~~~~~~~~  161 (176)
                      ..+||++.+..+..+..  +...|-++.|+|...++++++.|..|++=|+..    .-++.....|..++..+.|.|+.-
T Consensus       255 c~lydirg~r~iq~f~p--hsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~  332 (350)
T KOG0641|consen  255 CMLYDIRGGRMIQRFHP--HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDF  332 (350)
T ss_pred             eEEEEeeCCceeeeeCC--CccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccc
Confidence            99999998877665432  235688999999999999999999999998642    234555667888888889999988


Q ss_pred             EEEEccCCCcEEEe
Q psy15417        162 AVATGSWDSFLRIW  175 (176)
Q Consensus       162 ~l~tg~~d~~v~vw  175 (176)
                      .+++.+.|.++.+|
T Consensus       333 sfisssadkt~tlw  346 (350)
T KOG0641|consen  333 SFISSSADKTATLW  346 (350)
T ss_pred             eeeeccCcceEEEe
Confidence            88999999999999

>KOG0301|consensus

Probab=99.85  E-value=1.9e-20  Score=145.81  Aligned_cols=155  Identities=28%  Similarity=0.423  Sum_probs=129.1

Q ss_pred             CCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        12 ~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      +...+.||+..|-|++...++. +++||+|.++++|..  +++...+++|+.+|.++.+.|+. .++|||.|.+|++|.-
T Consensus        93 P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~  168 (745)
T KOG0301|consen   93 PLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG  168 (745)
T ss_pred             chhhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC
Confidence            3344789999999999877777 999999999999975  56788899999999999999998 8999999999999975


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                        +..+..+.  .|...|-.+++-|+ ..|++++.||.|+.|++ .++.+.++.+|.+.+.+++...++..+++++.|++
T Consensus       169 --~~~l~tf~--gHtD~VRgL~vl~~-~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrt  242 (745)
T KOG0301|consen  169 --GTLLKTFS--GHTDCVRGLAVLDD-SHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRT  242 (745)
T ss_pred             --Cchhhhhc--cchhheeeeEEecC-CCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCce
Confidence              33444332  12234555666554 45788899999999996 89999999999999999997777889999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      +|||+
T Consensus       243 lriW~  247 (745)
T KOG0301|consen  243 LRIWK  247 (745)
T ss_pred             EEEee
Confidence            99995

>KOG1446|consensus

Probab=99.85  E-value=4.3e-19  Score=127.29  Aligned_cols=158  Identities=16%  Similarity=0.267  Sum_probs=133.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC--CCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD--DATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~--d~~i~iwd~~   92 (176)
                      ++..-.+.|+++.|+++|.++++++.|-++++||..+++.++++..+.+.+..++|....+.++.++.  |.+||+-++.
T Consensus         9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~   88 (311)
T KOG1446|consen    9 VFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH   88 (311)
T ss_pred             ccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee
Confidence            34445688999999999999999999999999999999999999999999999999877777777766  8899999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      +.+-++.+  .++...|+++..+|-+..+++++.|+++++||++..++...+.....+  ..||.|+|.++|++.....|
T Consensus        89 dNkylRYF--~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~~~~I  164 (311)
T KOG1446|consen   89 DNKYLRYF--PGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANGSELI  164 (311)
T ss_pred             cCceEEEc--CCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEecCCCeE
Confidence            87766654  344457899999999999999999999999998866666655443344  46899999999999888899


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       165 kLyD  168 (311)
T KOG1446|consen  165 KLYD  168 (311)
T ss_pred             EEEE
Confidence            9987

>KOG0268|consensus

Probab=99.85  E-value=3.3e-21  Score=140.56  Aligned_cols=159  Identities=25%  Similarity=0.452  Sum_probs=120.4

Q ss_pred             cCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +.||...|.|++=+|.. ..+++|+.||.|++||+.+.++..+++.|.+.|+++++..  .-++++++|.+|+.|-+..+
T Consensus        62 L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~  139 (433)
T KOG0268|consen   62 LDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGP  139 (433)
T ss_pred             ccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccCC
Confidence            68999999999999976 6899999999999999999999999999999999999986  77899999999999974321


Q ss_pred             ---------------------------CeeeEEee--cce-------EeceEEEEECCCCc-EEEEEcCCCeEEEEeCCC
Q psy15417         95 ---------------------------QELAMYSH--DNI-------ICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus        95 ---------------------------~~~~~~~~--~~~-------~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~  137 (176)
                                                 +.+..|..  ..+       ...+.++.|+|-.+ +|+++..|+.|.+||+..
T Consensus       140 p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~  219 (433)
T KOG0268|consen  140 PLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQ  219 (433)
T ss_pred             cceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEeccc
Confidence                                       11111110  000       01255666666543 445555677777777544


Q ss_pred             ce------------------------------------------eeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        138 TE------------------------------------------RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       138 ~~------------------------------------------~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ..                                          ++....+|...|..++|+|.|.-+++||.|.+||||
T Consensus       220 ~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf  299 (433)
T KOG0268|consen  220 ASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIF  299 (433)
T ss_pred             CCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEe
Confidence            33                                          233345677788899999999999999999999998


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      .
T Consensus       300 ~  300 (433)
T KOG0268|consen  300 P  300 (433)
T ss_pred             e
Confidence            4

>KOG1274|consensus

Probab=99.85  E-value=1.8e-19  Score=144.00  Aligned_cols=157  Identities=20%  Similarity=0.259  Sum_probs=132.7

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      -+-++.+++|+.+|.+++.||.|-.|++.+.........+++|+++|.++.|+|+++.|++++-||.+++||+.+.....
T Consensus        95 ftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~  174 (933)
T KOG1274|consen   95 FTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSK  174 (933)
T ss_pred             eeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhh
Confidence            36788999999999999999999999999999888899999999999999999999999999999999999997654322


Q ss_pred             EEe-------ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC--CCccEEEEEEeCCCCEEEEccCC
Q psy15417         99 MYS-------HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG--HDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        99 ~~~-------~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      ...       +.. ...++.++|+|++-.++....++.+++|+...++....+..  +...+..+.|+|+|+|||+++-|
T Consensus       175 tl~~v~k~n~~~~-s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~  253 (933)
T KOG1274|consen  175 TLTGVDKDNEFIL-SRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLD  253 (933)
T ss_pred             hcccCCccccccc-cceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccC
Confidence            211       111 13456789999988888888899999999888777666543  23348899999999999999999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      +.|.|||
T Consensus       254 g~I~vWn  260 (933)
T KOG1274|consen  254 GQILVWN  260 (933)
T ss_pred             CcEEEEe
Confidence            9999997

>KOG0642|consensus

Probab=99.84  E-value=3.4e-20  Score=141.52  Aligned_cols=164  Identities=17%  Similarity=0.313  Sum_probs=138.1

Q ss_pred             CCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC----------eeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417         12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG----------SCKQTFPGHESDINAVTFFPNGWAFATGS   81 (176)
Q Consensus        12 ~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~----------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s   81 (176)
                      ....+.+|+++|.|+++++++..+++|+.||+|+.|++..+          ....++.||+..|..+++++....|++++
T Consensus       336 pi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs  415 (577)
T KOG0642|consen  336 PILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCS  415 (577)
T ss_pred             eeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeec
Confidence            33447899999999999999999999999999999965421          34557889999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCeeeEEeec------------c--------------------------------------eEeceEE
Q psy15417         82 DDATCRLFDIRADQELAMYSHD------------N--------------------------------------IICGITS  111 (176)
Q Consensus        82 ~d~~i~iwd~~~~~~~~~~~~~------------~--------------------------------------~~~~v~~  111 (176)
                      .||++++|+....+. ..+...            .                                      ....++.
T Consensus       416 ~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~  494 (577)
T KOG0642|consen  416 SDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINK  494 (577)
T ss_pred             CCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccce
Confidence            999999999754433 111000            0                                      0013577


Q ss_pred             EEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        112 VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       112 ~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +..+|...+.+++..|+.|+++|..+++++.....|...+.++++.|+|.+|++|+.|+.+++|.
T Consensus       495 vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~k  559 (577)
T KOG0642|consen  495 VVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWK  559 (577)
T ss_pred             EEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhh
Confidence            88999999999999999999999999999999999999999999999999999999999999984

>KOG0278|consensus

Probab=99.84  E-value=1.6e-21  Score=136.25  Aligned_cols=158  Identities=25%  Similarity=0.402  Sum_probs=143.8

Q ss_pred             cCCCccCeEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         16 ASGHTGDVMSLSLAP---DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~---~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      -.||+.+|..++|+|   +|.+|++++.|+.-.+-+-++|.-+.+|.+|.+.|.+.++..+....++++.|-+.++||.-
T Consensus        10 c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~   89 (334)
T KOG0278|consen   10 CHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAV   89 (334)
T ss_pred             EcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhh
Confidence            469999999999986   78899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      ++..+..+++.+.   |-.++|+.|..+|++|+.+..+||||+.+. .+...+.+|.+.|..+-|.-..+.|.+.++|++
T Consensus        90 tgdelhsf~hkhi---vk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~t  166 (334)
T KOG0278|consen   90 TGDELHSFEHKHI---VKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKT  166 (334)
T ss_pred             hhhhhhhhhhhhe---eeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCc
Confidence            9988888877764   457899999999999999999999998765 467788999999999999888888888899999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      ||+||
T Consensus       167 VRLWD  171 (334)
T KOG0278|consen  167 VRLWD  171 (334)
T ss_pred             eEEEE
Confidence            99997

>KOG1036|consensus

Probab=99.82  E-value=1.1e-18  Score=124.86  Aligned_cols=149  Identities=23%  Similarity=0.413  Sum_probs=122.9

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      +..|..+.|+|.+..|+.+++||++++||+....+...++ |..|+.+++|.+ ...+++|+.||.|+.+|+.+++....
T Consensus        13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~i   90 (323)
T KOG1036|consen   13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQI   90 (323)
T ss_pred             hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCCcceee
Confidence            6789999999999999999999999999999886666665 889999999987 45799999999999999988766554


Q ss_pred             EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ..+.   .++.++.+.+....+++|++|++|++||.........+ ...++|.++...  ++.|+.|+.|..|.+||
T Consensus        91 gth~---~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~-d~~kkVy~~~v~--g~~LvVg~~~r~v~iyD  161 (323)
T KOG1036|consen   91 GTHD---EGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTF-DQGKKVYCMDVS--GNRLVVGTSDRKVLIYD  161 (323)
T ss_pred             ccCC---CceEEEEeeccCCeEEEcccCccEEEEecccccccccc-ccCceEEEEecc--CCEEEEeecCceEEEEE
Confidence            4444   46889999988889999999999999996543333333 234588887765  67889999999999997

>KOG4283|consensus

Probab=99.82  E-value=4.4e-19  Score=126.77  Aligned_cols=157  Identities=25%  Similarity=0.346  Sum_probs=128.6

Q ss_pred             CCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC---CcEEEEeeCCCcEEEeeCC
Q psy15417         17 SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN---GWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        17 ~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+|.=.|..+.|-| |..+|.++|-|.++|+||.++-+....|+ .++.|.+-+++|-   ..++++|-+|-.|++-|+.
T Consensus        98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~  176 (397)
T KOG4283|consen   98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA  176 (397)
T ss_pred             ccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEecc
Confidence            47888899999988 77899999999999999999988777777 4567888888874   4578888889999999999


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCc-e--------------eeeeecCCCccEEEEEE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKT-E--------------RAGILAGHDNRVSCLGV  156 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~-~--------------~~~~~~~~~~~i~~~~~  156 (176)
                      ++.....  ...+..+|.++.|+|... +|++|+.||.|++||+.+. -              ......+|++++..+||
T Consensus       177 SGs~sH~--LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~  254 (397)
T KOG4283|consen  177 SGSFSHT--LSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAW  254 (397)
T ss_pred             CCcceee--eccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeee
Confidence            8764332  233445789999999876 5688999999999997653 1              12235678899999999


Q ss_pred             eCCCCEEEEccCCCcEEEeC
Q psy15417        157 TEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       157 ~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.++.++++++.|..+++|+
T Consensus       255 tSd~~~l~~~gtd~r~r~wn  274 (397)
T KOG4283|consen  255 TSDARYLASCGTDDRIRVWN  274 (397)
T ss_pred             cccchhhhhccCccceEEee
Confidence            99999999999999999996

>KOG0772|consensus

Probab=99.82  E-value=2.1e-19  Score=136.27  Aligned_cols=151  Identities=21%  Similarity=0.335  Sum_probs=107.8

Q ss_pred             CCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEe-c-----CCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         17 SGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTF-P-----GHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~-~-----~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      .||...++|-+|+|.. ..|+|++.||++++||++..+..... +     +-.-+|+.++|+|+++.+++|..||.|.+|
T Consensus       265 KGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W  344 (641)
T KOG0772|consen  265 KGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW  344 (641)
T ss_pred             CCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeee
Confidence            5899999999999965 58999999999999999876533222 1     233578999999999999999999999999


Q ss_pred             eCCCCCeeeEE-eecce--EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCc--cEEEEEEeCCCCEE
Q psy15417         90 DIRADQELAMY-SHDNI--ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDN--RVSCLGVTEDGMAV  163 (176)
Q Consensus        90 d~~~~~~~~~~-~~~~~--~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~--~i~~~~~~~~~~~l  163 (176)
                      +.++.-.-..+ ..+.+  ...|+++.|+++|++|++-+.|.++++||+... +++....+-..  .-..++|+|+...|
T Consensus       345 ~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli  424 (641)
T KOG0772|consen  345 DKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLI  424 (641)
T ss_pred             ecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEE
Confidence            97543211111 11111  136999999999999999999999999997653 22222222111  12334566666666


Q ss_pred             EEcc
Q psy15417        164 ATGS  167 (176)
Q Consensus       164 ~tg~  167 (176)
                      +||.
T Consensus       425 ~TGt  428 (641)
T KOG0772|consen  425 LTGT  428 (641)
T ss_pred             Eecc
Confidence            6654

>KOG0646|consensus

Probab=99.82  E-value=1e-18  Score=130.90  Aligned_cols=155  Identities=15%  Similarity=0.211  Sum_probs=130.0

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC------
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA------   93 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~------   93 (176)
                      .++|.|+.-+|+|.+|+.|.-.|.+.+|.+.+|+++..+.+|-++|+++.|+.|+.+|+|||.||.|.+|.+-+      
T Consensus        81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~  160 (476)
T KOG0646|consen   81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADN  160 (476)
T ss_pred             ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccccc
Confidence            47899999999999999998999999999999999999999999999999999999999999999999998631      


Q ss_pred             -CCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         94 -DQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        94 -~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                       ........+.++..+|+.+...+.  ...+++.+.|.++++||+..+..+.++. ....+.++++.|....+..|+.+|
T Consensus       161 ~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G  239 (476)
T KOG0646|consen  161 DHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEG  239 (476)
T ss_pred             CCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcc
Confidence             111223334445556777766655  3588999999999999999888877664 345689999999999999999999


Q ss_pred             cEEEe
Q psy15417        171 FLRIW  175 (176)
Q Consensus       171 ~v~vw  175 (176)
                      .|.+.
T Consensus       240 ~I~~~  244 (476)
T KOG0646|consen  240 KIFQN  244 (476)
T ss_pred             eEEee
Confidence            98764

>KOG0639|consensus

Probab=99.81  E-value=1.3e-19  Score=137.24  Aligned_cols=150  Identities=24%  Similarity=0.414  Sum_probs=131.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~  101 (176)
                      ..++++.+||.+..++|..||.|.+||+.+...++.|++|+..+.|+.++++|..|.+|+.|.++|.||+++...+..+.
T Consensus       511 aCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd  590 (705)
T KOG0639|consen  511 ACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD  590 (705)
T ss_pred             hhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999887765554


Q ss_pred             ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        102 HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       102 ~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      +.   ..|.++.+.|.+.+++.|-+++.+-|......+.. .+..|..-|.++.|.+-|+++++.+.|..+..|
T Consensus       591 F~---SQIfSLg~cP~~dWlavGMens~vevlh~skp~ky-qlhlheScVLSlKFa~cGkwfvStGkDnlLnaw  660 (705)
T KOG0639|consen  591 FS---SQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW  660 (705)
T ss_pred             hh---hhheecccCCCccceeeecccCcEEEEecCCccce-eecccccEEEEEEecccCceeeecCchhhhhhc
Confidence            44   35788999999999999999999988875444333 333477889999999999999999999988777

>KOG2445|consensus

Probab=99.81  E-value=9.5e-18  Score=120.34  Aligned_cols=120  Identities=23%  Similarity=0.347  Sum_probs=94.1

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC----eeeeEecCCCCCeeEEEEcc-C-CcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG----SCKQTFPGHESDINAVTFFP-N-GWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~~-~-~~~l~s~s~d~~i~i   88 (176)
                      -.++|..-|.|+.|.+-|+.+++|+.|++|++||.++.    .+...++.|.++|..|.|.+ . |..+++++.|++++|
T Consensus         8 i~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~i   87 (361)
T KOG2445|consen    8 IDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSI   87 (361)
T ss_pred             cccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceee
Confidence            46789999999999999999999999999999997543    46678889999999999964 3 899999999999999


Q ss_pred             eeC--CCCCe-eeEE----eecceEeceEEEEECCC--CcEEEEEcCCCeEEEEe
Q psy15417         89 FDI--RADQE-LAMY----SHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWD  134 (176)
Q Consensus        89 wd~--~~~~~-~~~~----~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d  134 (176)
                      |+=  ++.+. -..+    ...+....|..+.|.|.  |-.+++++.||++|||+
T Consensus        88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYE  142 (361)
T KOG2445|consen   88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYE  142 (361)
T ss_pred             eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEe
Confidence            973  11111 1111    12233356788888886  56788888899998887

>KOG0268|consensus

Probab=99.80  E-value=4.2e-19  Score=129.66  Aligned_cols=153  Identities=21%  Similarity=0.358  Sum_probs=122.5

Q ss_pred             ccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         20 TGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        20 ~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      ...|.++.|+|-. ..|++|..|+.|.+||++.+..+..+-. +-.-+.++|.|.+-.|.+++.|..+..+|++..+.. 
T Consensus       187 ~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~-~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p-  264 (433)
T KOG0268|consen  187 ADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL-TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRP-  264 (433)
T ss_pred             CCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee-eccccceecCccccceeeccccccceehhhhhhccc-
Confidence            4567899999865 4778888999999999998876554431 234688999999999999999999999999865442 


Q ss_pred             EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCC---ccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         99 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD---NRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ...+..+...|..++|+|.|+.+++|+.|.+|+||....+..-.  ..|.   ..|.|+.|+-|..|+++||+|+.||+|
T Consensus       265 ~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRd--iYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlW  342 (433)
T KOG0268|consen  265 LNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRD--IYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLW  342 (433)
T ss_pred             chhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchh--hhhHhhhheeeEEEEeccccEEEecCCCcceeee
Confidence            23355666789999999999999999999999999865443211  1232   358999999999999999999999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      .
T Consensus       343 k  343 (433)
T KOG0268|consen  343 K  343 (433)
T ss_pred             e
Confidence            3

>KOG2106|consensus

Probab=99.80  E-value=4.1e-18  Score=129.12  Aligned_cols=150  Identities=23%  Similarity=0.310  Sum_probs=121.7

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe----------------------------------------eeeE
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS----------------------------------------CKQT   57 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~----------------------------------------~~~~   57 (176)
                      .|.+.|.++..-.+|.+| +|+.|+.|..||-+-.+                                        ...+
T Consensus       285 aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~  363 (626)
T KOG2106|consen  285 AHDGGVFSLCMLRDGTLL-SGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLT  363 (626)
T ss_pred             ecCCceEEEEEecCccEe-ecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEE
Confidence            799999999999888766 49999999999932110                                        0012


Q ss_pred             ecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417         58 FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus        58 ~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~  137 (176)
                      .++|......++.+|+..+++++++|+.+++|+  +.+........   .++.++.|||.+ .++.|+..|...+.|.++
T Consensus       364 v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~---d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~  437 (626)
T KOG2106|consen  364 VQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIE---DPAECADFHPSG-VVAVGTATGRWFVLDTET  437 (626)
T ss_pred             EEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEec---CceeEeeccCcc-eEEEeeccceEEEEeccc
Confidence            336878888999999999999999999999999  33332222222   346689999999 999999999999999998


Q ss_pred             ceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       138 ~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ...+..... +.++++++|+|+|.+||.|+.|+.|+||
T Consensus       438 ~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy  474 (626)
T KOG2106|consen  438 QDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIY  474 (626)
T ss_pred             ceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEE
Confidence            776666665 8899999999999999999999999998

>KOG1407|consensus

Probab=99.80  E-value=6.7e-18  Score=118.75  Aligned_cols=152  Identities=19%  Similarity=0.205  Sum_probs=130.3

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      -.++-+.|+.++.+++.....|+|.|....+-+.+.+++.|+....++.|.|+|++|++|+.|-.+.+||+...-.++.+
T Consensus       148 ~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~i  227 (313)
T KOG1407|consen  148 FEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCI  227 (313)
T ss_pred             ceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheee
Confidence            45677889888888888888999999999999999999999999999999999999999999999999998755445554


Q ss_pred             eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC---------Cc
Q psy15417        101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD---------SF  171 (176)
Q Consensus       101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d---------~~  171 (176)
                      ....  -+|-.+.|+.+|++|++|++|..|-|=+.+++.++..++ +.++...++|+|....||-+++|         |+
T Consensus       228 sRld--wpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~  304 (313)
T KOG1407|consen  228 SRLD--WPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGT  304 (313)
T ss_pred             cccc--CceEEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecCCCCccccccce
Confidence            4332  467889999999999999999999999999999988886 66778899999999998866654         56


Q ss_pred             EEEe
Q psy15417        172 LRIW  175 (176)
Q Consensus       172 v~vw  175 (176)
                      +|+|
T Consensus       305 vKiF  308 (313)
T KOG1407|consen  305 VKIF  308 (313)
T ss_pred             eEEe
Confidence            7766

>KOG1036|consensus

Probab=99.80  E-value=6e-18  Score=121.16  Aligned_cols=150  Identities=24%  Similarity=0.365  Sum_probs=122.8

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC-
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-   95 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~-   95 (176)
                      ..|.+++.+++|.+ ....++|+-||.|+.+|+++++ ...+..|..+++++.+.+....+++||+|++|++||.+... 
T Consensus        51 ~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~-~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~  128 (323)
T KOG1036|consen   51 FKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGN-EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVV  128 (323)
T ss_pred             eecCCceeeeeccC-CceEEEeccCceEEEEEecCCc-ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccc
Confidence            34899999999986 5678899999999999999886 44566799999999999988899999999999999987210 


Q ss_pred             ------------------eeeE---------Eeec---------------------------------------------
Q psy15417         96 ------------------ELAM---------YSHD---------------------------------------------  103 (176)
Q Consensus        96 ------------------~~~~---------~~~~---------------------------------------------  103 (176)
                                        .+.+         +-..                                             
T Consensus       129 ~~~~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~  208 (323)
T KOG1036|consen  129 VGTFDQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDD  208 (323)
T ss_pred             ccccccCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCC
Confidence                              0000         0000                                             


Q ss_pred             ------------c---------eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE
Q psy15417        104 ------------N---------IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA  162 (176)
Q Consensus       104 ------------~---------~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  162 (176)
                                  .         ..-+|++++|||-...|++|+.||.+.+||+...+.+..+......|..++|+.+|..
T Consensus       209 s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~  288 (323)
T KOG1036|consen  209 SEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSL  288 (323)
T ss_pred             chHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCe
Confidence                        0         0014899999999999999999999999999988888888877788999999999999


Q ss_pred             EEEccC
Q psy15417        163 VATGSW  168 (176)
Q Consensus       163 l~tg~~  168 (176)
                      ||.++.
T Consensus       289 LAia~s  294 (323)
T KOG1036|consen  289 LAIASS  294 (323)
T ss_pred             EEEEec
Confidence            998864

>KOG0322|consensus

Probab=99.79  E-value=1.5e-18  Score=122.15  Aligned_cols=157  Identities=16%  Similarity=0.251  Sum_probs=126.4

Q ss_pred             CCccCeEEEEEcC-CCC--EEEEEeCCCeEEEEEcCCCee----------eeEecCCCCCeeEEEEccCCcEEEEeeCCC
Q psy15417         18 GHTGDVMSLSLAP-DMR--TFVSGACDASAKLWDIRDGSC----------KQTFPGHESDINAVTFFPNGWAFATGSDDA   84 (176)
Q Consensus        18 gh~~~V~~~~~~~-~~~--~l~s~s~dg~v~~wd~~~~~~----------~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~   84 (176)
                      +..+.|+|.++.. ++.  +|++|..+|.|.+||+.++..          ......|.++|.++.+.+....=++++.+-
T Consensus       148 ~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~d  227 (323)
T KOG0322|consen  148 SKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADD  227 (323)
T ss_pred             cccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccc
Confidence            4567888887543 232  678889999999999999843          334446899999999998655567888888


Q ss_pred             cEEEeeCCCC--Ce--eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC
Q psy15417         85 TCRLFDIRAD--QE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus        85 ~i~iwd~~~~--~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~  160 (176)
                      .+-.|++...  +.  ..+....+  ++++-+.+.||++++++++.|++||||+.++..++..+..|...|++++|+|+.
T Consensus       228 kl~~~Sl~~s~gslq~~~e~~lkn--pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~  305 (323)
T KOG0322|consen  228 KLVMYSLNHSTGSLQIRKEITLKN--PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDC  305 (323)
T ss_pred             cceeeeeccccCcccccceEEecC--CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCC
Confidence            8888887432  11  11222222  478889999999999999999999999999999999999999999999999998


Q ss_pred             CEEEEccCCCcEEEeC
Q psy15417        161 MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 ~~l~tg~~d~~v~vwd  176 (176)
                      ..+|++|.|++|.+|+
T Consensus       306 ~lmAaaskD~rISLWk  321 (323)
T KOG0322|consen  306 ELMAAASKDARISLWK  321 (323)
T ss_pred             chhhhccCCceEEeee
Confidence            9999999999999995

>KOG1539|consensus

Probab=99.79  E-value=2.5e-18  Score=136.43  Aligned_cols=153  Identities=18%  Similarity=0.343  Sum_probs=137.1

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe---cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF---PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      ..+++++.++.|...+.|+..|+|-+|++++|.....|   +.|..+|++++...-++.+++++.+|-+++||.+....+
T Consensus       449 ~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~  528 (910)
T KOG1539|consen  449 INATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLK  528 (910)
T ss_pred             cceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCccee
Confidence            67889999999999999999999999999999888888   579999999999888899999999999999999866544


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ......   .++..+..|.....++++..|..|+++|..+.+....+.+|.++|+.++|+|+|..|++++-|++||+||
T Consensus       529 ~~l~l~---~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wD  604 (910)
T KOG1539|consen  529 KSLRLG---SSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWD  604 (910)
T ss_pred             eeeccC---CCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEe
Confidence            433333   3466777888888899999999999999999999999999999999999999999999999999999998

>KOG1274|consensus

Probab=99.79  E-value=4.7e-18  Score=135.99  Aligned_cols=145  Identities=21%  Similarity=0.361  Sum_probs=119.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC--------CCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH--------ESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h--------~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      .+.||.++|.+++|+|++.+|++.+.||.|++||+.++.+..++.+-        ...+.-++|+|++-.++....|+.|
T Consensus       133 ~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~V  212 (933)
T KOG1274|consen  133 VLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTV  212 (933)
T ss_pred             eecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeE
Confidence            46799999999999999999999999999999999999887777652        3456778999998888889999999


Q ss_pred             EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE
Q psy15417         87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  163 (176)
                      ++++..+.+.............++.+.|+|.|.++++++.++.|.|||.++-+.    ......|.|++|.|+.+.+
T Consensus       213 kvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~i  285 (933)
T KOG1274|consen  213 KVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKPNANAI  285 (933)
T ss_pred             EEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh----ccccceeEEEecCCCCCee
Confidence            999988777665555544444588999999999999999999999999876222    1123568999999987665

>KOG2445|consensus

Probab=99.77  E-value=6.9e-17  Score=115.98  Aligned_cols=161  Identities=19%  Similarity=0.344  Sum_probs=122.2

Q ss_pred             ccCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcC--CC-------eeeeEecCCCCCeeEEEEccC--CcEEEEee
Q psy15417         15 AASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIR--DG-------SCKQTFPGHESDINAVTFFPN--GWAFATGS   81 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~--~~-------~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s   81 (176)
                      .-..|.+.|..+.|.+  -|+.+++|+.|+++.||+-.  +.       ....++....+.|+.|+|.|.  |-.+++++
T Consensus        54 ~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~  133 (361)
T KOG2445|consen   54 SWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAAS  133 (361)
T ss_pred             eEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEec
Confidence            3456999999999955  48999999999999999862  11       234456666788999999996  77899999


Q ss_pred             CCCcEEEeeCCCCCeeeE----------------------------------------------------Eeec------
Q psy15417         82 DDATCRLFDIRADQELAM----------------------------------------------------YSHD------  103 (176)
Q Consensus        82 ~d~~i~iwd~~~~~~~~~----------------------------------------------------~~~~------  103 (176)
                      .||.+|||+......+..                                                    +++.      
T Consensus       134 aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw  213 (361)
T KOG2445|consen  134 ADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKW  213 (361)
T ss_pred             cCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCccee
Confidence            999999998543211100                                                    0000      


Q ss_pred             -------ceEeceEEEEECCC-C---cEEEEEcCCCeEEEEeCCC--------------------ceeeeeecCCCccEE
Q psy15417        104 -------NIICGITSVAFSRS-G---RLLLAGYDDFNCNVWDSMK--------------------TERAGILAGHDNRVS  152 (176)
Q Consensus       104 -------~~~~~v~~~~~~~~-~---~~l~~g~~d~~i~v~d~~~--------------------~~~~~~~~~~~~~i~  152 (176)
                             .+..+|..++|.|+ |   .++++++.|| |+||.++.                    -+.+..+.+|+..|+
T Consensus       214 ~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VW  292 (361)
T KOG2445|consen  214 LKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVW  292 (361)
T ss_pred             eeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceE
Confidence                   11135788999997 2   4678899999 99999652                    124455678999999


Q ss_pred             EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        153 CLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .+.|.-.|..|++.|+||+||+|.
T Consensus       293 rv~wNmtGtiLsStGdDG~VRLWk  316 (361)
T KOG2445|consen  293 RVRWNMTGTILSSTGDDGCVRLWK  316 (361)
T ss_pred             EEEEeeeeeEEeecCCCceeeehh
Confidence            999999999999999999999993

>KOG1408|consensus

Probab=99.76  E-value=1.6e-17  Score=130.62  Aligned_cols=161  Identities=21%  Similarity=0.319  Sum_probs=132.2

Q ss_pred             cCCCccCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCC-CeeeeEecCCCCCeeEEEE---------------------
Q psy15417         16 ASGHTGDVMSLSLAPD---MRTFVSGACDASAKLWDIRD-GSCKQTFPGHESDINAVTF---------------------   70 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~---~~~l~s~s~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~---------------------   70 (176)
                      ...|+..|.|+.|+..   .++|++++.|+.|.+||+.. ..++.++-+|.+.|+++.|                     
T Consensus       497 ~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr  576 (1080)
T KOG1408|consen  497 MEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFR  576 (1080)
T ss_pred             eecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhhee
Confidence            3579999999999864   46899999999999999853 3445555555555555444                     


Q ss_pred             ----------------------------ccCCcEEEEeeCCCcEEEeeCCCCCeeeEEee-cceEeceEEEEECCCCcEE
Q psy15417         71 ----------------------------FPNGWAFATGSDDATCRLFDIRADQELAMYSH-DNIICGITSVAFSRSGRLL  121 (176)
Q Consensus        71 ----------------------------~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l  121 (176)
                                                  .|..++++++++|+.|+|||+.++++...|.. ..+....-.+...|.|.++
T Consensus       577 ~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~  656 (1080)
T KOG1408|consen  577 VNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYL  656 (1080)
T ss_pred             hhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEE
Confidence                                        45556789999999999999998888776642 2222344567889999999


Q ss_pred             EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        122 LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       122 ~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++...|+++.++|.-+++++..+.+|..-|+.+.|++|=+.|++.+.||+|.||.
T Consensus       657 atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~  711 (1080)
T KOG1408|consen  657 ATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWK  711 (1080)
T ss_pred             EEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEE
Confidence            9999999999999999999999999999999999999999999999999999993

>KOG0307|consensus

Probab=99.75  E-value=4.6e-18  Score=138.61  Aligned_cols=161  Identities=22%  Similarity=0.324  Sum_probs=126.9

Q ss_pred             cCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecC--CCCCeeEEEEccC-CcEEEEeeCCCcEEEeeC
Q psy15417         16 ASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPG--HESDINAVTFFPN-GWAFATGSDDATCRLFDI   91 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~   91 (176)
                      +.-|++.|..++|++.+. .|++|+.||.|.|||+++-+.-.++..  ..+.|.+++|... .+.|++++.+|++.|||+
T Consensus       112 ~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDl  191 (1049)
T KOG0307|consen  112 KSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDL  191 (1049)
T ss_pred             hcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccc
Confidence            345999999999999766 999999999999999988655544432  3577999999865 567889999999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCC-C--eEEEEeCCCc-eeeeeecCCCccEEEEEEeCCC-CEEEE
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDD-F--NCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDG-MAVAT  165 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d-~--~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~-~~l~t  165 (176)
                      |..+.+..+......+.++.+.|||+. +.+++++.| +  .|.+||++.. .+..++.+|+..|.++.|.+.+ .++++
T Consensus       192 r~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllS  271 (1049)
T KOG0307|consen  192 RKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLS  271 (1049)
T ss_pred             cCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhc
Confidence            988766555433333557899999996 344444433 3  5899997643 4566778999999999999876 88899


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      ++.|++|.+||
T Consensus       272 sgkD~~ii~wN  282 (1049)
T KOG0307|consen  272 SGKDNRIICWN  282 (1049)
T ss_pred             ccCCCCeeEec
Confidence            99999999996

>KOG4328|consensus

Probab=99.75  E-value=1.3e-17  Score=124.80  Aligned_cols=166  Identities=18%  Similarity=0.207  Sum_probs=125.8

Q ss_pred             cCCCcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecC--CCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417         10 LLGSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPG--HESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus        10 ~~~~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      +-+-..+..|.++|.++.|+| +...+++.|+||++++=|++.+.....+..  ......+++|..+...++.+..=|..
T Consensus       224 ~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f  303 (498)
T KOG4328|consen  224 KDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNF  303 (498)
T ss_pred             cCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccce
Confidence            334445788999999999999 456899999999999999987653333322  34556778888776666666666799


Q ss_pred             EEeeCCCCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCc--e--eeeeecCCCccEEEEEEeCCCC
Q psy15417         87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKT--E--RAGILAGHDNRVSCLGVTEDGM  161 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~--~--~~~~~~~~~~~i~~~~~~~~~~  161 (176)
                      .+||++.+..... ...-+...|+.++++|-.+ ++++++.|++.+|||+.+-  +  +......|...|.+..|+|.+.
T Consensus       304 ~~iD~R~~~s~~~-~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~g  382 (498)
T KOG4328|consen  304 NVIDLRTDGSEYE-NLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGG  382 (498)
T ss_pred             EEEEeecCCccch-hhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCC
Confidence            9999987654221 1111223788999999764 7799999999999997542  1  2344457889999999999988


Q ss_pred             EEEEccCCCcEEEeC
Q psy15417        162 AVATGSWDSFLRIWN  176 (176)
Q Consensus       162 ~l~tg~~d~~v~vwd  176 (176)
                      .|+|-+.|..|||||
T Consensus       383 tl~TT~~D~~IRv~d  397 (498)
T KOG4328|consen  383 TLLTTCQDNEIRVFD  397 (498)
T ss_pred             ceEeeccCCceEEee
Confidence            899999999999997

>KOG0650|consensus

Probab=99.75  E-value=5.4e-17  Score=125.25  Aligned_cols=160  Identities=21%  Similarity=0.317  Sum_probs=117.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEE------
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCR------   87 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~------   87 (176)
                      .+.||++.|.+++.+|.|..|++|+.||+|++|.+.+++|+++++ -.+.|.+|+|.|.+. .+++++.+..+.      
T Consensus       395 vyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~  473 (733)
T KOG0650|consen  395 VYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIF  473 (733)
T ss_pred             eEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCccc
Confidence            357999999999999999999999999999999999999999887 345688888887643 222222222222      


Q ss_pred             ---------------------------EeeCCC---CC---eee----------EE------------------------
Q psy15417         88 ---------------------------LFDIRA---DQ---ELA----------MY------------------------  100 (176)
Q Consensus        88 ---------------------------iwd~~~---~~---~~~----------~~------------------------  100 (176)
                                                 .|.-.+   .+   .+.          .+                        
T Consensus       474 G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQL  553 (733)
T KOG0650|consen  474 GDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQL  553 (733)
T ss_pred             cchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEec
Confidence                                       232100   00   000          00                        


Q ss_pred             -------eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417        101 -------SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus       101 -------~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                             ++......++++.|||...+|++++. ..+++||+.+++.+..+..-..+|..++++|.|..|+.|+.|+.+-
T Consensus       554 SK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~  632 (733)
T KOG0650|consen  554 SKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMC  632 (733)
T ss_pred             ccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeE
Confidence                   00011123789999999998888765 4699999988888777777778999999999999999999999987


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      .||
T Consensus       633 WfD  635 (733)
T KOG0650|consen  633 WFD  635 (733)
T ss_pred             EEE
Confidence            765

>KOG1009|consensus

Probab=99.74  E-value=4.1e-17  Score=120.67  Aligned_cols=155  Identities=19%  Similarity=0.294  Sum_probs=128.8

Q ss_pred             cCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCe---------eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         21 GDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGS---------CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        21 ~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~---------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      .+|..+.|.+++. .++||+.|..|++|.++.++         ....+..|+..|+.+.|+|+|..++||+++|.+.+|-
T Consensus        14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk   93 (434)
T KOG1009|consen   14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWK   93 (434)
T ss_pred             CceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEE
Confidence            5799999999877 99999999999999986542         3446778999999999999999999999999999997


Q ss_pred             CC--------C-----CCeee-EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417         91 IR--------A-----DQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV  156 (176)
Q Consensus        91 ~~--------~-----~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~  156 (176)
                      ..        +     .+... ......+...+..++|+|++..+++++-|..+++||+..+.....+.+|...++.++|
T Consensus        94 ~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvaw  173 (434)
T KOG1009|consen   94 QGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAW  173 (434)
T ss_pred             ecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeec
Confidence            54        1     01111 1112223345778899999999999999999999999999999999999999999999


Q ss_pred             eCCCCEEEEccCCCcEEEe
Q psy15417        157 TEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       157 ~~~~~~l~tg~~d~~v~vw  175 (176)
                      .|-+.++++=+.|+..+++
T Consensus       174 Dpl~qyv~s~s~dr~~~~~  192 (434)
T KOG1009|consen  174 DPLNQYVASKSSDRHPEGF  192 (434)
T ss_pred             chhhhhhhhhccCccccee
Confidence            9999999999988865543

>KOG2055|consensus

Probab=99.74  E-value=2.6e-16  Score=118.15  Aligned_cols=173  Identities=14%  Similarity=0.216  Sum_probs=136.9

Q ss_pred             CccccccccCCCcccCCCccC-eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEe
Q psy15417          2 CDHLDKSALLGSPAASGHTGD-VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATG   80 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~-V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~   80 (176)
                      .+++++..+....+..|++.+ +.....++++.+++..+..|.|.+.-..+++.+.+++ -.+.|.+++|+.+++.++.+
T Consensus       284 syDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~  362 (514)
T KOG2055|consen  284 SYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLAS  362 (514)
T ss_pred             EeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEE
Confidence            355666666666667777754 5567789999999999999999999999999988887 46789999999999999999


Q ss_pred             eCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc------eeee------------
Q psy15417         81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT------ERAG------------  142 (176)
Q Consensus        81 s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~------~~~~------------  142 (176)
                      +.+|.|.+||++....+..|.-++... -++++.++++.+|++|+..|.+.|||....      +++.            
T Consensus       363 ~~~GeV~v~nl~~~~~~~rf~D~G~v~-gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl  441 (514)
T KOG2055|consen  363 GGTGEVYVWNLRQNSCLHRFVDDGSVH-GTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSL  441 (514)
T ss_pred             cCCceEEEEecCCcceEEEEeecCccc-eeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeee
Confidence            999999999999887777776555433 345777889999999999999999983211      1000            


Q ss_pred             -----------------------ee---------cCC---CccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        143 -----------------------IL---------AGH---DNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       143 -----------------------~~---------~~~---~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                                             .+         +..   -+.+.|++|+|++.++|.|-.+|.+.+|.
T Consensus       442 ~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~k  510 (514)
T KOG2055|consen  442 QFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFK  510 (514)
T ss_pred             eeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEe
Confidence                                   00         111   23589999999999999999999999993

>KOG0290|consensus

Probab=99.74  E-value=9.2e-17  Score=114.67  Aligned_cols=164  Identities=17%  Similarity=0.305  Sum_probs=131.0

Q ss_pred             CcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCe---eeeEecCCCCCeeEEEEccCC-cEEEEeeCCCcEE
Q psy15417         13 SPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNG-WAFATGSDDATCR   87 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~   87 (176)
                      ....+.+.+++++.+|.. +..++.++|-|-+.-+||++++.   ....+-.|...|..++|...+ ..|+++|.||.+|
T Consensus       143 ~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvR  222 (364)
T KOG0290|consen  143 NNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVR  222 (364)
T ss_pred             cCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEE
Confidence            334566888999999976 67899999999999999999873   366777899999999999854 5799999999999


Q ss_pred             EeeCCCCCeee-EEeecceEeceEEEEECCCCc-EEEEEc-CCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCC-CCE
Q psy15417         88 LFDIRADQELA-MYSHDNIICGITSVAFSRSGR-LLLAGY-DDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTED-GMA  162 (176)
Q Consensus        88 iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~l~~g~-~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~-~~~  162 (176)
                      ++|+|.-++.. .++.+....++..++|++... ++++-. ....+.+.|++. ..++..+.+|...|+.++|.|. ...
T Consensus       223 mFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~h  302 (364)
T KOG0290|consen  223 MFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSH  302 (364)
T ss_pred             EEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCce
Confidence            99999866533 344333345678889988764 445533 344688899764 4678889999999999999997 467


Q ss_pred             EEEccCCCcEEEeC
Q psy15417        163 VATGSWDSFLRIWN  176 (176)
Q Consensus       163 l~tg~~d~~v~vwd  176 (176)
                      |.|+|+|.++.+||
T Consensus       303 ictaGDD~qaliWD  316 (364)
T KOG0290|consen  303 ICTAGDDCQALIWD  316 (364)
T ss_pred             eeecCCcceEEEEe
Confidence            89999999999997

>KOG1188|consensus

Probab=99.74  E-value=6.2e-17  Score=117.52  Aligned_cols=156  Identities=20%  Similarity=0.329  Sum_probs=122.8

Q ss_pred             cCeEEEEEcCCC-------CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc--CCcEEEEeeCCCcEEEeeC
Q psy15417         21 GDVMSLSLAPDM-------RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP--NGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        21 ~~V~~~~~~~~~-------~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~d~~i~iwd~   91 (176)
                      .+=.|+.++++.       ..++++-.+|+|++||..+++....|++++..++.+.|..  .++.+.+|+.||+|++||+
T Consensus        22 ~~~~~Lk~~~q~~~~~~~e~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~  101 (376)
T KOG1188|consen   22 NEDFCLKYDIQEQVKDGFETAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDI  101 (376)
T ss_pred             cccceeeccchhhhccCcceeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEe
Confidence            334456665321       3578888899999999999999999999999999999987  5788999999999999999


Q ss_pred             CCCCeeeEEeecceE-eceEEEEECCCCcEEEEEc----CCCeEEEEeCCCcee-ee-eecCCCccEEEEEEeCC-CCEE
Q psy15417         92 RADQELAMYSHDNII-CGITSVAFSRSGRLLLAGY----DDFNCNVWDSMKTER-AG-ILAGHDNRVSCLGVTED-GMAV  163 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~g~----~d~~i~v~d~~~~~~-~~-~~~~~~~~i~~~~~~~~-~~~l  163 (176)
                      |+....+.+...... .+..+++.+..+.++++|.    .+..+.+||.+..++ +. -...|...|+++.|.|+ .+.|
T Consensus       102 Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlL  181 (376)
T KOG1188|consen  102 RSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLL  181 (376)
T ss_pred             ecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeE
Confidence            987766554433222 3556777766778888875    456788999877665 33 34579999999999997 4788


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      ++||.||-|-|||
T Consensus       182 lSGSvDGLvnlfD  194 (376)
T KOG1188|consen  182 LSGSVDGLVNLFD  194 (376)
T ss_pred             EeecccceEEeee
Confidence            9999999999987

>KOG1539|consensus

Probab=99.74  E-value=8.4e-17  Score=127.91  Aligned_cols=155  Identities=24%  Similarity=0.344  Sum_probs=131.1

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      +.|.++|..++...-++.+++++.+|.+++||+.+...+..+.- ..++.++..+.....++.+..|-.|+++|..+-..
T Consensus       490 ~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l-~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kv  568 (910)
T KOG1539|consen  490 PAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRL-GSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKV  568 (910)
T ss_pred             ccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeecc-CCCcceeeeeehhhhhhhhcCceeEEEEEchhhhh
Confidence            57999999999998889999999999999999998887777763 45577788888888899999999999999876655


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC-CcEEEe
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD-SFLRIW  175 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d-~~v~vw  175 (176)
                      ++.+.  .+...++..+|+|||+++++++-|++|++||+.++.++..+. -...+..+.|+|+|.+|||...| .-|.+|
T Consensus       569 vR~f~--gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylW  645 (910)
T KOG1539|consen  569 VREFW--GHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLW  645 (910)
T ss_pred             hHHhh--ccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEE
Confidence            54433  333578999999999999999999999999999988776654 34567889999999999999988 468888

>KOG0771|consensus

Probab=99.74  E-value=3.6e-17  Score=121.27  Aligned_cols=152  Identities=19%  Similarity=0.261  Sum_probs=115.4

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417         24 MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~  103 (176)
                      .+++|+.++..+++|+.||++++|+..+-..+.....|.+.|.++.|+||++.|++.+.| ..++|+..++..++.....
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            578999999999999999999999988777777788899999999999999999999999 9999999988655443322


Q ss_pred             ceEeceEEEEECCCC-----cEEEEEcCCCeEEEEeCCCce-----eeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417        104 NIICGITSVAFSRSG-----RLLLAGYDDFNCNVWDSMKTE-----RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus       104 ~~~~~v~~~~~~~~~-----~~l~~g~~d~~i~v~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      ........+.|..+.     .+++.....+.++.|++....     +......-.+.|++++++++|+++|.|+-||.|.
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa  306 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA  306 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence            222334566676665     333334445566666643322     2222223346899999999999999999999998


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      |++
T Consensus       307 i~~  309 (398)
T KOG0771|consen  307 IYD  309 (398)
T ss_pred             EEE
Confidence            874

>KOG0321|consensus

Probab=99.73  E-value=9.5e-17  Score=124.51  Aligned_cols=175  Identities=22%  Similarity=0.323  Sum_probs=124.2

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCe---------------------------
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGS---------------------------   53 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~---------------------------   53 (176)
                      +|+.+++.+.+.-.+.||.+.|.+++|.|. ...|++|+.||.+.|||.+-..                           
T Consensus       126 ~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~k  205 (720)
T KOG0321|consen  126 PWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKK  205 (720)
T ss_pred             eeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhc
Confidence            356677788887778999999999999995 5689999999999999986332                           


Q ss_pred             eeeEecCCCCCeeE---EEEccCCcEEEEeeC-CCcEEEeeCCCCCeeeEEe------e---cceEeceEEEEECCCCcE
Q psy15417         54 CKQTFPGHESDINA---VTFFPNGWAFATGSD-DATCRLFDIRADQELAMYS------H---DNIICGITSVAFSRSGRL  120 (176)
Q Consensus        54 ~~~~~~~h~~~v~~---v~~~~~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~------~---~~~~~~v~~~~~~~~~~~  120 (176)
                      .+...+.+...+.+   +-++.|..+|+++|. |+.|++||++........+      +   .....++.++.....|.+
T Consensus       206 r~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~  285 (720)
T KOG0321|consen  206 RIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTY  285 (720)
T ss_pred             cccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCe
Confidence            01111223333444   556677788888888 9999999998764332111      1   111235667777778898


Q ss_pred             EEEEcCCCeEEEEeCCCc--eeeeeecCCCcc-E-EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        121 LLAGYDDFNCNVWDSMKT--ERAGILAGHDNR-V-SCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       121 l~~g~~d~~i~v~d~~~~--~~~~~~~~~~~~-i-~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |++...|+.|+.||+...  .+...+.++... + ..-..+|++.++++|++|.+.++|.
T Consensus       286 L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~  345 (720)
T KOG0321|consen  286 LFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWV  345 (720)
T ss_pred             EEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeee
Confidence            888888999999997543  344445555332 1 2234689999999999999999994

>KOG1034|consensus

Probab=99.73  E-value=6.2e-17  Score=117.10  Aligned_cols=162  Identities=24%  Similarity=0.414  Sum_probs=124.2

Q ss_pred             ccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEec---CCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFP---GHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      .+.||-..|+.+.|+|+ .+++++||.|.+|++||+++..|+..|.   +|.+.|.++.|++++..+++++.|.++++|+
T Consensus       130 ~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~  209 (385)
T KOG1034|consen  130 NYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWR  209 (385)
T ss_pred             ceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEe
Confidence            46789999999999996 4799999999999999999999988775   5889999999999999999999999999999


Q ss_pred             CCCCCe---------------eeEEee-----------cce----------------------E----------------
Q psy15417         91 IRADQE---------------LAMYSH-----------DNI----------------------I----------------  106 (176)
Q Consensus        91 ~~~~~~---------------~~~~~~-----------~~~----------------------~----------------  106 (176)
                      +...+.               ...++.           ..+                      +                
T Consensus       210 l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vk  289 (385)
T KOG1034|consen  210 LNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVK  289 (385)
T ss_pred             cChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccC
Confidence            872210               000000           000                      0                


Q ss_pred             ----------------ece--EEEEECCCCcEEEEEcCCCeEEEEeCCCceee--eeec--CCCccEEEEEEeCCCCEEE
Q psy15417        107 ----------------CGI--TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA--GILA--GHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus       107 ----------------~~v--~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~--~~~~--~~~~~i~~~~~~~~~~~l~  164 (176)
                                      +.+  -..+|+|-+++|+.|...|.+.+||+...++.  .++.  .....|...+|+.++..|+
T Consensus       290 p~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv  369 (385)
T KOG1034|consen  290 PPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILV  369 (385)
T ss_pred             CCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEE
Confidence                            001  12345666778999999999999998876652  1221  2234688899999999999


Q ss_pred             EccCCCcEEEeC
Q psy15417        165 TGSWDSFLRIWN  176 (176)
Q Consensus       165 tg~~d~~v~vwd  176 (176)
                      ...+|++|-=||
T Consensus       370 ~vcdd~~Vwrwd  381 (385)
T KOG1034|consen  370 LVCDDGTVWRWD  381 (385)
T ss_pred             EEeCCCcEEEEE
Confidence            999999987775

>KOG2048|consensus

Probab=99.73  E-value=1.4e-15  Score=118.72  Aligned_cols=160  Identities=19%  Similarity=0.254  Sum_probs=126.8

Q ss_pred             ccCCCc-cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHT-GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~-~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.|++ ..|..++|+ ++..|++.+-+|.|.-||+.+++.+..+..-.+++.+++.+|....++.|++||.+..++...
T Consensus        63 vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p  141 (691)
T KOG2048|consen   63 VIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGP  141 (691)
T ss_pred             EEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCC
Confidence            345555 579999999 455677888899999999999999998888889999999999999999999999777777655


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-------C-CCccEEEEEEeCCCCEEEE
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-------G-HDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-------~-~~~~i~~~~~~~~~~~l~t  165 (176)
                      +.......+.....++.+++|+|++..+++|+.||.|++||..++.......       . ..--|+++.|..+ ..|++
T Consensus       142 ~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~s  220 (691)
T KOG2048|consen  142 DKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIAS  220 (691)
T ss_pred             ceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEE
Confidence            5444333344444689999999999999999999999999988775444211       1 1223678888755 47889


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      |-..|+|++||
T Consensus       221 gDS~G~V~FWd  231 (691)
T KOG2048|consen  221 GDSAGTVTFWD  231 (691)
T ss_pred             ecCCceEEEEc
Confidence            99999999998

>KOG4328|consensus

Probab=99.73  E-value=5.3e-17  Score=121.65  Aligned_cols=159  Identities=23%  Similarity=0.275  Sum_probs=124.8

Q ss_pred             CCccCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCe----eeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEee
Q psy15417         18 GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGS----CKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFD   90 (176)
Q Consensus        18 gh~~~V~~~~~~~~~--~~l~s~s~dg~v~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd   90 (176)
                      -|.+.|.+++|+|..  +++++|+.-|.|-+||+.+.+    -+..+..|.++|.++.|+|. ...+++.|.||+|++-|
T Consensus       184 v~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D  263 (498)
T KOG4328|consen  184 VTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQD  263 (498)
T ss_pred             ecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeee
Confidence            478999999999954  589999999999999996432    46678889999999999996 56899999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee-eeeecCCCccEEEEEEeCCC-CEEEEccC
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER-AGILAGHDNRVSCLGVTEDG-MAVATGSW  168 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~l~tg~~  168 (176)
                      ++......++........++.+.|+.+...++.+..=|...+||+..... .....-|..+|..+++.|.. .+|||+|.
T Consensus       264 ~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~  343 (498)
T KOG4328|consen  264 FEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASL  343 (498)
T ss_pred             ecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeeccc
Confidence            87654333333322223466778888877777776666899999876544 44455678899999999864 57899999


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      |++.+|||
T Consensus       344 D~T~kIWD  351 (498)
T KOG4328|consen  344 DQTAKIWD  351 (498)
T ss_pred             Ccceeeee
Confidence            99999998

>KOG0321|consensus

Probab=99.73  E-value=4.6e-17  Score=126.24  Aligned_cols=160  Identities=24%  Similarity=0.371  Sum_probs=116.0

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE--ecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT--FPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~   92 (176)
                      ...|...|..+.|-|....|++++.|.++++||++.+++...  +.||++.|.++||+|. ...|++|++||.|.|||++
T Consensus        96 ~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R  175 (720)
T KOG0321|consen   96 PLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCR  175 (720)
T ss_pred             cccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEe
Confidence            457999999999999777999999999999999999988776  8999999999999996 5689999999999999987


Q ss_pred             CCCe--e-----eEE-eecc---------------------eEeceEEEEECCCCcEEEEEcC-CCeEEEEeCCCceeee
Q psy15417         93 ADQE--L-----AMY-SHDN---------------------IICGITSVAFSRSGRLLLAGYD-DFNCNVWDSMKTERAG  142 (176)
Q Consensus        93 ~~~~--~-----~~~-~~~~---------------------~~~~v~~~~~~~~~~~l~~g~~-d~~i~v~d~~~~~~~~  142 (176)
                      ....  .     ..+ .+..                     ....|+.+ +..|...|+++++ |+.|+|||+.+.....
T Consensus       176 ~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv-~fkDe~tlaSaga~D~~iKVWDLRk~~~~~  254 (720)
T KOG0321|consen  176 CNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVV-LFKDESTLASAGAADSTIKVWDLRKNYTAY  254 (720)
T ss_pred             ccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEE-EEeccceeeeccCCCcceEEEeeccccccc
Confidence            4320  0     000 0000                     00124444 4456677777666 9999999987643221


Q ss_pred             --------eecCC---CccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        143 --------ILAGH---DNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       143 --------~~~~~---~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                              .+..|   .-.+.++.....|.+|.+-+.|+.|..||
T Consensus       255 r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~yn  299 (720)
T KOG0321|consen  255 RQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYN  299 (720)
T ss_pred             ccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEe
Confidence                    22334   22456666666678876655699999996

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.72  E-value=2.6e-15  Score=113.87  Aligned_cols=160  Identities=33%  Similarity=0.591  Sum_probs=129.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|...|.++.|+|++..+++++. |+.+++|+...++....+.+|...|.+++|.|++. .+++++.|+.+++||..
T Consensus       150 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~  229 (466)
T COG2319         150 TLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS  229 (466)
T ss_pred             EEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECC
Confidence            46789999999999999999999886 99999999998888889999999999999999987 56666999999999887


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee-eeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER-AGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      .+..... ....+.... ...|+|++..+++++.++.+++|+...... ......|...+.++.|.|++..+++++.|+.
T Consensus       230 ~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~  307 (466)
T COG2319         230 TGKLLRS-TLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGT  307 (466)
T ss_pred             CCcEEee-ecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCc
Confidence            5544431 122221221 127999998888999999999999775543 3344678889999999998888888999988


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      +++||
T Consensus       308 ~~~~~  312 (466)
T COG2319         308 VRLWD  312 (466)
T ss_pred             EEEEE
Confidence            99984

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.72  E-value=4e-15  Score=109.97  Aligned_cols=150  Identities=17%  Similarity=0.226  Sum_probs=112.5

Q ss_pred             CeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEE-eeCCCcEEEeeCCCCCeeeE
Q psy15417         22 DVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFAT-GSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        22 ~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s-~s~d~~i~iwd~~~~~~~~~   99 (176)
                      .+.++.|+|++..+ ++++.++.+++||..+++....+..+.. +..++|+|+++.++. ++.++.+++||+++.+.+..
T Consensus        32 ~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~  110 (300)
T TIGR03866        32 RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAE  110 (300)
T ss_pred             CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeE
Confidence            36789999999876 5677889999999999888777766544 567899999886654 56689999999987655544


Q ss_pred             EeecceEeceEEEEECCCCcEEEEEcCCC-eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE-EccCCCcEEEeC
Q psy15417        100 YSHDNIICGITSVAFSRSGRLLLAGYDDF-NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA-TGSWDSFLRIWN  176 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~-~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-tg~~d~~v~vwd  176 (176)
                      +....   .+..+.|+|++..++++..++ .+.+||..+.+....... ......++|+|++..|+ ++..++.|++||
T Consensus       111 ~~~~~---~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d  185 (300)
T TIGR03866       111 IPVGV---EPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVID  185 (300)
T ss_pred             eeCCC---CcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEE
Confidence            43221   245789999999998887765 567789877766554432 23456789999998875 555689999996

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG2055|consensus

Probab=99.72  E-value=1.3e-15  Score=114.51  Aligned_cols=156  Identities=18%  Similarity=0.281  Sum_probs=122.8

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCCCee
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIR--DGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      +.|+++.|+|....|++|+.||++++|.+.  ++..+..+.-..-|+.+.+|.|+|. .+++++.-.....||+.+.+..
T Consensus       214 ~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~  293 (514)
T KOG2055|consen  214 GGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVT  293 (514)
T ss_pred             CCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccc
Confidence            679999999999999999999999999885  3345555555578899999999998 8999999999999998654321


Q ss_pred             -------------eEEe--ec----------ce-----------------EeceEEEEECCCCcEEEEEcCCCeEEEEeC
Q psy15417         98 -------------AMYS--HD----------NI-----------------ICGITSVAFSRSGRLLLAGYDDFNCNVWDS  135 (176)
Q Consensus        98 -------------~~~~--~~----------~~-----------------~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~  135 (176)
                                   ..|.  +.          .+                 ...+..++|+.+++.+++.+.+|.+.+||+
T Consensus       294 k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl  373 (514)
T KOG2055|consen  294 KLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNL  373 (514)
T ss_pred             cccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEEec
Confidence                         1110  00          00                 023678899999999999999999999999


Q ss_pred             CCceeeeeecCCCc-cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        136 MKTERAGILAGHDN-RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       136 ~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ....++..+..... .-..++.++++.+||+||..|-|.|||
T Consensus       374 ~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd  415 (514)
T KOG2055|consen  374 RQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYD  415 (514)
T ss_pred             CCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEec
Confidence            88877777654322 235677889999999999999999996

>KOG1063|consensus

Probab=99.71  E-value=2e-16  Score=123.72  Aligned_cols=162  Identities=22%  Similarity=0.318  Sum_probs=122.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee----eeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC----KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      .+.+|+-.|+.++||||+++|++.|.|+++.+|+......    -...+.|+.-|.++.|+|+.++|+|+|+|.++++|.
T Consensus       567 ~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~  646 (764)
T KOG1063|consen  567 ELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWE  646 (764)
T ss_pred             eecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEe
Confidence            5788999999999999999999999999999999865421    123667999999999999999999999999999998


Q ss_pred             CCCC--CeeeEEeecceEeceEEEEECCC-----CcEEEEEcCCCeEEEEeCCCcee------------eeeecCCCccE
Q psy15417         91 IRAD--QELAMYSHDNIICGITSVAFSRS-----GRLLLAGYDDFNCNVWDSMKTER------------AGILAGHDNRV  151 (176)
Q Consensus        91 ~~~~--~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~g~~d~~i~v~d~~~~~~------------~~~~~~~~~~i  151 (176)
                      ...+  +.+..+........++.+++.|-     +..++.|...|.|.+|...+.+.            .....+|...|
T Consensus       647 ~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV  726 (764)
T KOG1063|consen  647 EPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAV  726 (764)
T ss_pred             ccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhh
Confidence            7655  33322222222345777777662     23778899999999998542211            11223556678


Q ss_pred             EEEEEeCC----------CCEEEEccCCCcEEEeC
Q psy15417        152 SCLGVTED----------GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~----------~~~l~tg~~d~~v~vwd  176 (176)
                      ..+.|.|-          ...|++|+.|..+|+++
T Consensus       727 ~rl~w~p~~~~~~~~~~~~l~la~~g~D~~vri~n  761 (764)
T KOG1063|consen  727 NRLLWRPTCSDDWVEDKEWLNLAVGGDDESVRIFN  761 (764)
T ss_pred             heeEeccccccccccccceeEEeeecccceeEEee
Confidence            88999864          23479999999999985

>KOG2096|consensus

Probab=99.71  E-value=5.2e-16  Score=112.21  Aligned_cols=155  Identities=20%  Similarity=0.342  Sum_probs=124.2

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC---CCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR---ADQ   95 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~---~~~   95 (176)
                      |...|..+-...++.++++++.|.+|.+|+++ |+.+.++......-...+.+|+|+.+++++....+++|++-   .+.
T Consensus       186 h~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~  264 (420)
T KOG2096|consen  186 HQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGT  264 (420)
T ss_pred             cccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcc
Confidence            66777778888889999999999999999998 88888887766677789999999999999999999999963   222


Q ss_pred             ---eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC-------------Cc---------eeee--------
Q psy15417         96 ---ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM-------------KT---------ERAG--------  142 (176)
Q Consensus        96 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~-------------~~---------~~~~--------  142 (176)
                         ....++...+...|...+|+++.+.+++.+.||++++||..             .+         ++..        
T Consensus       265 fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~  344 (420)
T KOG2096|consen  265 FQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGD  344 (420)
T ss_pred             hhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCc
Confidence               23456677777889999999999999999999999999932             00         0000        


Q ss_pred             -----------e------------ecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        143 -----------I------------LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       143 -----------~------------~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                                 .            -..|...|.+++|+++|.+++||+ |+.++++
T Consensus       345 ~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~  399 (420)
T KOG2096|consen  345 SLAVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVI  399 (420)
T ss_pred             EEEeecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeee
Confidence                       0            024677899999999999999997 5677765

>KOG1034|consensus

Probab=99.71  E-value=4.4e-17  Score=117.89  Aligned_cols=127  Identities=24%  Similarity=0.390  Sum_probs=110.7

Q ss_pred             cCCCcccCCCccCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCC
Q psy15417         10 LLGSPAASGHTGDVMSLSLAPD----MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDA   84 (176)
Q Consensus        10 ~~~~~~~~gh~~~V~~~~~~~~----~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~   84 (176)
                      ++.+...+.|++.-..++|+-+    ..+++.|+.-|.|++.|+.++++...+.+|...|+.+.|+|. .++++++|.|.
T Consensus        79 ~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~  158 (385)
T KOG1034|consen   79 LLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDH  158 (385)
T ss_pred             eeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCc
Confidence            3344445568888888888754    347889999999999999999999999999999999999997 47899999999


Q ss_pred             cEEEeeCCCCCeeeEEe-ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         85 TCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        85 ~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                      +||+||++++..+..+. .+.+...|.++.|++++..+++++-|.++++|++.
T Consensus       159 svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~  211 (385)
T KOG1034|consen  159 SVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN  211 (385)
T ss_pred             eEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence            99999999998887764 66777789999999999999999999999999976

>KOG1007|consensus

Probab=99.71  E-value=4.9e-16  Score=110.97  Aligned_cols=155  Identities=19%  Similarity=0.292  Sum_probs=121.3

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee-eeEec-----CCCCCeeEEEEcc--CCcEEEEeeCCCcEEEe
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC-KQTFP-----GHESDINAVTFFP--NGWAFATGSDDATCRLF   89 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~-~~~~~-----~h~~~v~~v~~~~--~~~~l~s~s~d~~i~iw   89 (176)
                      .|-+.|.|+.|.|++..+++-. |..|.+|++.++.. ...+.     +|....++.+|+|  +++.+++. .|++++.|
T Consensus       121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~  198 (370)
T KOG1007|consen  121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFW  198 (370)
T ss_pred             HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEE
Confidence            5667999999999999998876 77899999987654 33333     2456678889998  57777766 57899999


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCC-CCEEEEc
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTED-GMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~-~~~l~tg  166 (176)
                      |+|+.......+-. +...+-.+.|+|+.. +|++++.||.+++||.+. ..++..+.+|.-+++++.|.|. ...|.+|
T Consensus       199 D~RT~~~~~sI~dA-Hgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~  277 (370)
T KOG1007|consen  199 DLRTMKKNNSIEDA-HGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSG  277 (370)
T ss_pred             Eccchhhhcchhhh-hcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEec
Confidence            99976554333222 223466789999875 678899999999999765 4578889999999999999986 4567899


Q ss_pred             cCCCcEEEe
Q psy15417        167 SWDSFLRIW  175 (176)
Q Consensus       167 ~~d~~v~vw  175 (176)
                      |.|..|.+|
T Consensus       278 ~SDs~V~Ls  286 (370)
T KOG1007|consen  278 GSDSAVNLS  286 (370)
T ss_pred             CCCceeEEE
Confidence            999999887

>KOG2394|consensus

Probab=99.71  E-value=4.3e-16  Score=119.00  Aligned_cols=135  Identities=23%  Similarity=0.335  Sum_probs=107.8

Q ss_pred             cCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCC--------------e--------------eeeEecCCCCCeeEEEEc
Q psy15417         21 GDVMSLSLAPD-MRTFVSGACDASAKLWDIRDG--------------S--------------CKQTFPGHESDINAVTFF   71 (176)
Q Consensus        21 ~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~--------------~--------------~~~~~~~h~~~v~~v~~~   71 (176)
                      ..|+|+.|-|. ...++.+-.+|.+.+||..-.              .              .+..+.--+++++..+|+
T Consensus       220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS  299 (636)
T KOG2394|consen  220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFS  299 (636)
T ss_pred             cceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEc
Confidence            67999999885 457788888999999975311              0              011121234578899999


Q ss_pred             cCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccE
Q psy15417         72 PNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV  151 (176)
Q Consensus        72 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i  151 (176)
                      |||++|++.|+||.+||+|..+.+.+....  ..-.++.|++|+|||+++++|++|-.+.||.+..++.+..-.+|..+|
T Consensus       300 ~DG~~LA~VSqDGfLRvF~fdt~eLlg~mk--SYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWV  377 (636)
T KOG2394|consen  300 PDGKYLATVSQDGFLRIFDFDTQELLGVMK--SYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWV  377 (636)
T ss_pred             CCCceEEEEecCceEEEeeccHHHHHHHHH--hhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccce
Confidence            999999999999999999987765543221  112467899999999999999999999999999999999999999999


Q ss_pred             EEEEEe
Q psy15417        152 SCLGVT  157 (176)
Q Consensus       152 ~~~~~~  157 (176)
                      +.|+|.
T Consensus       378 s~VaFD  383 (636)
T KOG2394|consen  378 SVVAFD  383 (636)
T ss_pred             eeEeec
Confidence            999998

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.70  E-value=6.7e-15  Score=108.76  Aligned_cols=153  Identities=13%  Similarity=0.114  Sum_probs=111.8

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCe-EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEeeCCCCCeeeE
Q psy15417         22 DVMSLSLAPDMRTFVSGACDAS-AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~-v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      .+.++.|+|++.++++++.++. +..||.++++....+... ....+++|+|++..++ ++..++.+.+||+++++.+..
T Consensus       116 ~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~  194 (300)
T TIGR03866       116 EPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVD-QRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKK  194 (300)
T ss_pred             CcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcC-CCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeee
Confidence            4678999999999999888754 677899888766555432 3457899999998775 445689999999988765544


Q ss_pred             Eeecce-----EeceEEEEECCCCcEEEE-EcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc-cCCCcE
Q psy15417        100 YSHDNI-----ICGITSVAFSRSGRLLLA-GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG-SWDSFL  172 (176)
Q Consensus       100 ~~~~~~-----~~~v~~~~~~~~~~~l~~-g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg-~~d~~v  172 (176)
                      +.....     ......+.|+|+++.+++ ...+..+.+||..+++...... +...+.+++|+|++.+|+++ +.++.|
T Consensus       195 ~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i  273 (300)
T TIGR03866       195 ITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDV  273 (300)
T ss_pred             eeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeE
Confidence            332110     011235789999987544 4556689999988777665443 33467899999999998875 568999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       274 ~v~d  277 (300)
T TIGR03866       274 SVID  277 (300)
T ss_pred             EEEE
Confidence            9997

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0649|consensus

Probab=99.70  E-value=8.7e-16  Score=107.44  Aligned_cols=152  Identities=14%  Similarity=0.161  Sum_probs=116.8

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC----------eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDG----------SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~----------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      .|..-+++|.+++|++|+.+|++.+..+++-          ..+..+++|+++++.++|+  ..+|++++. |.|+=|.-
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gd-G~V~gw~W   88 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGD-GLVYGWEW   88 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccC-ceEEEeee
Confidence            4556678999999999999999999987542          2344668999999999998  456777765 99998875


Q ss_pred             CCCCe----eeEEeec-------ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC
Q psy15417         92 RADQE----LAMYSHD-------NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus        92 ~~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~  160 (176)
                      +...+    ...++..       -....|+++-..|....++.++.|+.++-||+++++...++.+|.+.+.++.-....
T Consensus        89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~  168 (325)
T KOG0649|consen   89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNAN  168 (325)
T ss_pred             hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccC
Confidence            43321    1111111       112358888888876655555589999999999999999999999999998875555


Q ss_pred             CEEEEccCCCcEEEeC
Q psy15417        161 MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 ~~l~tg~~d~~v~vwd  176 (176)
                      ..+.+|+.||++||||
T Consensus       169 ~qilsG~EDGtvRvWd  184 (325)
T KOG0649|consen  169 GQILSGAEDGTVRVWD  184 (325)
T ss_pred             cceeecCCCccEEEEe
Confidence            6678999999999997

>KOG2048|consensus

Probab=99.70  E-value=6.1e-15  Score=115.16  Aligned_cols=154  Identities=19%  Similarity=0.293  Sum_probs=126.2

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-eeeEecCCC-CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHE-SDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      -.+|.+++|+.+...||.+=.||.|-+|+++.+= +...+.+++ ..+.+++|.+.+ .|++.+.+|.|.-||+-+.++.
T Consensus        25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~-RLFS~g~sg~i~EwDl~~lk~~  103 (691)
T KOG2048|consen   25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGG-RLFSSGLSGSITEWDLHTLKQK  103 (691)
T ss_pred             ccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCC-eEEeecCCceEEEEecccCcee
Confidence            3678999999999999999999999999998753 455666664 789999999655 6888889999999999877665


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ..  .+.....+=+++.+|....+++|++||.+..++....+...  .+.....++.+++|.|++..|++|+.||.|++|
T Consensus       104 ~~--~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriw  181 (691)
T KOG2048|consen  104 YN--IDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIW  181 (691)
T ss_pred             EE--ecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEE
Confidence            44  33333467789999999999999999988888876665433  334456789999999999999999999999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       182 d  182 (691)
T KOG2048|consen  182 D  182 (691)
T ss_pred             E
Confidence            7

>KOG1523|consensus

Probab=99.69  E-value=7e-16  Score=111.32  Aligned_cols=160  Identities=20%  Similarity=0.230  Sum_probs=128.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-e--eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-S--CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      .+..|...|++++|+|....+++|+.|+--.+|...++ +  ..-.+..+...+++|.|+|..++|++||..+.|.+|-.
T Consensus        50 tls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~  129 (361)
T KOG1523|consen   50 TLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYY  129 (361)
T ss_pred             ehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEE
Confidence            45679999999999999999999999999999998443 2  33345558889999999999999999999999999988


Q ss_pred             CCCCeeeEEee--cceEeceEEEEECCCCcEEEEEcCCCeEEEEeC-----C-------------CceeeeeecCCCccE
Q psy15417         92 RADQELAMYSH--DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS-----M-------------KTERAGILAGHDNRV  151 (176)
Q Consensus        92 ~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~-----~-------------~~~~~~~~~~~~~~i  151 (176)
                      +.+....+..+  ......|++++|||+.-++++|+.|+.+||+..     +             -++++.+.....+++
T Consensus       130 E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwv  209 (361)
T KOG1523|consen  130 EQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWV  209 (361)
T ss_pred             ecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCce
Confidence            87665533322  222346889999999999999999999999972     1             112333444556789


Q ss_pred             EEEEEeCCCCEEEEccCCCcEEE
Q psy15417        152 SCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       152 ~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      ..+.|+|+|..|+=.+.|+++.+
T Consensus       210 h~v~fs~sG~~lawv~Hds~v~~  232 (361)
T KOG1523|consen  210 HGVLFSPSGNRLAWVGHDSTVSF  232 (361)
T ss_pred             eeeEeCCCCCEeeEecCCCceEE
Confidence            99999999999999999998865

>KOG1063|consensus

Probab=99.68  E-value=1.4e-15  Score=118.95  Aligned_cols=161  Identities=19%  Similarity=0.292  Sum_probs=127.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDA-----SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg-----~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      .+.||--.|+|++.+|++.+++|++...     .|++|+..+-..+..+.+|.--|+-++|+||+++|+++|+|+++.+|
T Consensus       520 KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~  599 (764)
T KOG1063|consen  520 KLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLY  599 (764)
T ss_pred             HhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEee
Confidence            4689999999999999999999988743     36899998887788899999999999999999999999999999999


Q ss_pred             eCCCCCeeeEEe---ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc--eeeee--ecCCCccEEEEEEeCC---
Q psy15417         90 DIRADQELAMYS---HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT--ERAGI--LAGHDNRVSCLGVTED---  159 (176)
Q Consensus        90 d~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~--~~~~~--~~~~~~~i~~~~~~~~---  159 (176)
                      +...+.. -.+.   ...+..=|=.+.|+|+..+|++++.|+++++|.....  +.+..  ...+...|+++++.|-   
T Consensus       600 ~~~~~~~-~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~  678 (764)
T KOG1063|consen  600 EVQEDIK-DEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHN  678 (764)
T ss_pred             eeecccc-hhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccc
Confidence            8743322 1112   1222222557889999999999999999999986655  33332  3456778999988753   


Q ss_pred             --CCEEEEccCCCcEEEeC
Q psy15417        160 --GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       160 --~~~l~tg~~d~~v~vwd  176 (176)
                        +..++.|-..|.|.+|.
T Consensus       679 e~~~~vavGle~GeI~l~~  697 (764)
T KOG1063|consen  679 EKGDVVAVGLEKGEIVLWR  697 (764)
T ss_pred             cccceEEEEecccEEEEEe
Confidence              33678999999999984

>KOG2919|consensus

Probab=99.68  E-value=1.4e-15  Score=110.11  Aligned_cols=153  Identities=18%  Similarity=0.293  Sum_probs=123.1

Q ss_pred             cCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~   93 (176)
                      ..|..+-+.|++|+| +.+.++.|+.-..+-||+-..++....+.+|.+.|+.++|.++|++|++|++ |-.|..||+|.
T Consensus       203 k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~  282 (406)
T KOG2919|consen  203 KFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRY  282 (406)
T ss_pred             cccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehh
Confidence            346688899999999 5669999999999999999888999999999999999999999999999987 67899999985


Q ss_pred             CCe-ee-EEeecc-eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         94 DQE-LA-MYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        94 ~~~-~~-~~~~~~-~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      -.. +. +..+.. ...+| .....|.+++|++|+.+|.+++||+.. +........|...++.+++.|-..++||++-.
T Consensus       283 ~~~pv~~L~rhv~~TNQRI-~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  283 SRDPVYALERHVGDTNQRI-LFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             ccchhhhhhhhccCccceE-EEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence            432 21 111111 11123 256678899999999999999999887 56666777788889999999998888887654

>KOG1523|consensus

Probab=99.68  E-value=4.3e-15  Score=107.31  Aligned_cols=153  Identities=14%  Similarity=0.157  Sum_probs=125.5

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      -++|+|.+|++|...++.+-.+..|.||......   ...++..|...|++|+|.|..+.+++|+.|+.-.+|...++..
T Consensus        10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~   89 (361)
T KOG1523|consen   10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT   89 (361)
T ss_pred             cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence            4789999999999999999999999999987654   6778999999999999999999999999999999999855432


Q ss_pred             e----eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee--e--eecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         97 L----AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA--G--ILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        97 ~----~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~--~--~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      .    ....+.   ....++.|+|..+.|++|+..+.|.||=.+...--  .  ....+...|.+++|+|++..|++|+.
T Consensus        90 WkptlvLlRiN---rAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~  166 (361)
T KOG1523|consen   90 WKPTLVLLRIN---RAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGST  166 (361)
T ss_pred             eccceeEEEec---cceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccccc
Confidence            2    222222   34678999999999999999999999875432211  1  12234567899999999999999999


Q ss_pred             CCcEEEe
Q psy15417        169 DSFLRIW  175 (176)
Q Consensus       169 d~~v~vw  175 (176)
                      |+.+|||
T Consensus       167 D~k~rVf  173 (361)
T KOG1523|consen  167 DGKCRVF  173 (361)
T ss_pred             CcceeEE
Confidence            9999997

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.68  E-value=2.6e-14  Score=100.10  Aligned_cols=145  Identities=21%  Similarity=0.332  Sum_probs=101.2

Q ss_pred             EEEEcCCCCEEEEEeC----------CCeEEEEEcCCC-eeeeEecC-CCCCeeEEEEccCCcEEEEe--eCCCcEEEee
Q psy15417         25 SLSLAPDMRTFVSGAC----------DASAKLWDIRDG-SCKQTFPG-HESDINAVTFFPNGWAFATG--SDDATCRLFD   90 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~----------dg~v~~wd~~~~-~~~~~~~~-h~~~v~~v~~~~~~~~l~s~--s~d~~i~iwd   90 (176)
                      .+.|+|+|.+|+.-..          -+...+|-++.. .....+.- ..++|.+++|+|++..|+..  ..+..+.+||
T Consensus        10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd   89 (194)
T PF08662_consen   10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYD   89 (194)
T ss_pred             EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEc
Confidence            5788999876644333          133455555322 22333332 34579999999999987554  3567899999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcC---CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD---DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~---d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      ++ .+.+..+..    ..++.+.|+|+|++++.++.   .|.+.+||..+.+.+.... | ..+..++|+|+|.+|+++.
T Consensus        90 ~~-~~~i~~~~~----~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~  162 (194)
T PF08662_consen   90 VK-GKKIFSFGT----QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVEWSPDGRYLATAT  162 (194)
T ss_pred             Cc-ccEeEeecC----CCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-c-CcEEEEEEcCCCCEEEEEE
Confidence            96 333333322    34678999999999988753   4679999998877776654 3 3467899999999999886


Q ss_pred             C------CCcEEEeC
Q psy15417        168 W------DSFLRIWN  176 (176)
Q Consensus       168 ~------d~~v~vwd  176 (176)
                      .      |..++||+
T Consensus       163 t~~r~~~dng~~Iw~  177 (194)
T PF08662_consen  163 TSPRLRVDNGFKIWS  177 (194)
T ss_pred             eccceeccccEEEEE
Confidence            5      67788884

>KOG1408|consensus

Probab=99.67  E-value=1.3e-15  Score=119.96  Aligned_cols=158  Identities=16%  Similarity=0.279  Sum_probs=129.6

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-C--CcEEEEeeCCCcEEEeeCCCCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-N--GWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~--~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      -+-.+.+++.+|++++|++|..-|.+++|++.+-+....+..|++.|.++.|+- +  .++|+++++|+.|.++|...+-
T Consensus       458 ~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny  537 (1080)
T KOG1408|consen  458 SRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY  537 (1080)
T ss_pred             cccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc
Confidence            456789999999999999999999999999999888889999999999999974 3  5789999999999999975431


Q ss_pred             e-----------e--eEEeecc-----e------------------------------EeceEEEEECCCCcEEEEEcCC
Q psy15417         96 E-----------L--AMYSHDN-----I------------------------------ICGITSVAFSRSGRLLLAGYDD  127 (176)
Q Consensus        96 ~-----------~--~~~~~~~-----~------------------------------~~~v~~~~~~~~~~~l~~g~~d  127 (176)
                      .           +  .+|.-..     .                              ...+..+++.|...++++++.|
T Consensus       538 ~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQD  617 (1080)
T KOG1408|consen  538 DLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQD  617 (1080)
T ss_pred             chhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecc
Confidence            0           0  0111000     0                              0124567788999999999999


Q ss_pred             CeEEEEeCCCceeeeeec---CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        128 FNCNVWDSMKTERAGILA---GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       128 ~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.|+|||++.+++...+.   +|.+....+...|.|.|||+...|.++-++|
T Consensus       618 rnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~D  669 (1080)
T KOG1408|consen  618 RNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVD  669 (1080)
T ss_pred             cceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEE
Confidence            999999999999988875   4566777888999999999999999998886

>KOG1310|consensus

Probab=99.67  E-value=6e-16  Score=118.73  Aligned_cols=162  Identities=23%  Similarity=0.360  Sum_probs=122.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe-cCCCCCeeEEEEccC--CcEEEEeeCCCcEEEeeC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF-PGHESDINAVTFFPN--GWAFATGSDDATCRLFDI   91 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd~   91 (176)
                      .++||++-|+|+.|+.+|.+|++||.|-.+.+||.-..+++..+ .+|.+.|.++.|.|.  ...+++|+.|..|+++|+
T Consensus        45 eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl  124 (758)
T KOG1310|consen   45 ELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDL  124 (758)
T ss_pred             hhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEec
Confidence            37899999999999999999999999999999999877766655 579999999999995  678999999999999998


Q ss_pred             CCCCee--------eEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCcee-------eeee---cCCCccEE
Q psy15417         92 RADQEL--------AMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTER-------AGIL---AGHDNRVS  152 (176)
Q Consensus        92 ~~~~~~--------~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~-------~~~~---~~~~~~i~  152 (176)
                      .+.+.-        .......+..+|-.++--|++ .++-++++||+|+=+|+.....       ...+   ....-...
T Consensus       125 ~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk  204 (758)
T KOG1310|consen  125 DSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELK  204 (758)
T ss_pred             ccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheee
Confidence            642211        111122233345567777887 6889999999999999764211       1111   11122457


Q ss_pred             EEEEeCC-CCEEEEccCCCcEEEeC
Q psy15417        153 CLGVTED-GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~-~~~l~tg~~d~~v~vwd  176 (176)
                      |++++|. ..+||.|+.|-..++||
T Consensus       205 ~ltisp~rp~~laVGgsdpfarLYD  229 (758)
T KOG1310|consen  205 CLTISPSRPYYLAVGGSDPFARLYD  229 (758)
T ss_pred             eeeecCCCCceEEecCCCchhhhhh
Confidence            8888886 46789999999888886

>KOG0303|consensus

Probab=99.66  E-value=4.5e-15  Score=109.88  Aligned_cols=156  Identities=22%  Similarity=0.344  Sum_probs=118.3

Q ss_pred             cCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +.||...|--+.|+|.. ..|++++.|.+|.+||+.+++.+.++. |..-|.++.|+-+|.++++.+.|..||+||.+.+
T Consensus       127 L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~  205 (472)
T KOG0303|consen  127 LYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRG  205 (472)
T ss_pred             EeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCC
Confidence            78999999999999965 588999999999999999999888888 9999999999999999999999999999999998


Q ss_pred             CeeeEE-eecceEeceEEEEECCCCcEEEEEc---CCCeEEEEeCCCc-eeee--eecCCCccEEEEEEeCCCCEE-EEc
Q psy15417         95 QELAMY-SHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDSMKT-ERAG--ILAGHDNRVSCLGVTEDGMAV-ATG  166 (176)
Q Consensus        95 ~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~~-~~~~--~~~~~~~~i~~~~~~~~~~~l-~tg  166 (176)
                      ..+..- .+...  .-..+.|-.++.++.+|.   .++++.+||-..- +++.  ++.. .+.|.--=|.++.+.+ +.|
T Consensus       206 ~~v~e~~~heG~--k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~G  282 (472)
T KOG0303|consen  206 TVVSEGVAHEGA--KPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLCG  282 (472)
T ss_pred             cEeeecccccCC--CcceeEEeccCceeeeccccccccceeccCcccccCcceeEEecc-CCceEEeeecCCCCEEEEEe
Confidence            877654 33332  334566777888666654   5678999985442 2222  2222 2333322245665554 466


Q ss_pred             cCCCcEEEe
Q psy15417        167 SWDSFLRIW  175 (176)
Q Consensus       167 ~~d~~v~vw  175 (176)
                      --|+.||-|
T Consensus       283 KGD~~IRYy  291 (472)
T KOG0303|consen  283 KGDSSIRYF  291 (472)
T ss_pred             cCCcceEEE
Confidence            679999876

>KOG4378|consensus

Probab=99.66  E-value=3.5e-15  Score=113.35  Aligned_cols=160  Identities=16%  Similarity=0.195  Sum_probs=128.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC-CCCeeEEEEccCC-cEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNG-WAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|...|+++.|.....++++++..|.|.+....++....+|... .+.|+-+.|+|.. .+|.+++.+|.|.+||..
T Consensus       116 ~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~  195 (673)
T KOG4378|consen  116 FLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQ  195 (673)
T ss_pred             hccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEecc
Confidence            57789999999999999999999999999999999998877788754 4667799999975 568889999999999986


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      ...+..-+. ..+..+...|+|+|... ++++.+.|+.|.+||....+....+. ...+.+.++|+++|.+|+.|...|.
T Consensus       196 g~sp~~~~~-~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~  273 (673)
T KOG4378|consen  196 GMSPIFHAS-EAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGE  273 (673)
T ss_pred             CCCcccchh-hhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecCCce
Confidence            544432222 12224556788999765 66788999999999987655444443 3456789999999999999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      +..||
T Consensus       274 ~i~YD  278 (673)
T KOG4378|consen  274 LIAYD  278 (673)
T ss_pred             EEEEe
Confidence            98886

>KOG1538|consensus

Probab=99.66  E-value=7.4e-15  Score=115.21  Aligned_cols=161  Identities=20%  Similarity=0.339  Sum_probs=122.8

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-Ce-------eeeE--ec-------------------------
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-GS-------CKQT--FP-------------------------   59 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~-------~~~~--~~-------------------------   59 (176)
                      .+.||...|+|++|+.||+.+++|+.|+.|.+|...- |.       .++.  |.                         
T Consensus        48 tLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~  127 (1081)
T KOG1538|consen   48 PLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVS  127 (1081)
T ss_pred             ccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHH
Confidence            5789999999999999999999999999999998642 11       1111  00                         


Q ss_pred             CC--CCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE--------------------------------------
Q psy15417         60 GH--ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM--------------------------------------   99 (176)
Q Consensus        60 ~h--~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~--------------------------------------   99 (176)
                      .|  ...+.+++|..||.+++-|-.+|+|.+.+-..++....                                      
T Consensus       128 K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSF  207 (1081)
T KOG1538|consen  128 KHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSF  207 (1081)
T ss_pred             hhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEE
Confidence            12  34678899999999999999999999987422211110                                      


Q ss_pred             EeecceE--------eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417        100 YSHDNII--------CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus       100 ~~~~~~~--------~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      +...+..        -...|+.+-|+|.+++.|+.|+.+++|. ..+..+.+......+|+.++..|++.+++.|+.||+
T Consensus       208 y~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGT  286 (1081)
T KOG1538|consen  208 YQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGT  286 (1081)
T ss_pred             EEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCe
Confidence            0000000        0135677888999999999999999997 667778888777889999999999999999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      +.-|+
T Consensus       287 iACyN  291 (1081)
T KOG1538|consen  287 IACYN  291 (1081)
T ss_pred             eehhh
Confidence            97664

>KOG1273|consensus

Probab=99.65  E-value=4.2e-15  Score=107.37  Aligned_cols=169  Identities=23%  Similarity=0.282  Sum_probs=116.3

Q ss_pred             ccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeE---------------
Q psy15417          3 DHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINA---------------   67 (176)
Q Consensus         3 ~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~---------------   67 (176)
                      ++.++..+.+  .+++|..+|.+++||++|+.|+|+|.|..+++||+..|.+...++ -.++|..               
T Consensus        50 ~D~~T~~iar--~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~  126 (405)
T KOG1273|consen   50 YDFDTFRIAR--MLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATI  126 (405)
T ss_pred             EEccccchhh--hhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEE
Confidence            3444444433  478899999999999999999999999999999999887665544 1122222               


Q ss_pred             --------------------------------EEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEEC
Q psy15417         68 --------------------------------VTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS  115 (176)
Q Consensus        68 --------------------------------v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~  115 (176)
                                                      ..|.+.|+++++|..-|.+.++|..+-+.+..+.... ...|-.+.++
T Consensus       127 ~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits-~~~IK~I~~s  205 (405)
T KOG1273|consen  127 MEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITS-VQAIKQIIVS  205 (405)
T ss_pred             ecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeech-heeeeEEEEe
Confidence                                            2355566777888777788888777665554443322 2345678888


Q ss_pred             CCCcEEEEEcCCCeEEEEeCCC-------ceee--eeecCCC--ccEEEEEEeCCCCEEEEccC-CCcEEEe
Q psy15417        116 RSGRLLLAGYDDFNCNVWDSMK-------TERA--GILAGHD--NRVSCLGVTEDGMAVATGSW-DSFLRIW  175 (176)
Q Consensus       116 ~~~~~l~~g~~d~~i~v~d~~~-------~~~~--~~~~~~~--~~i~~~~~~~~~~~l~tg~~-d~~v~vw  175 (176)
                      ..|+.|++-+.|+.||.|++..       +++.  ..+...-  -.-.+++|+.+|.|+..|+. -+.++||
T Consensus       206 ~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIW  277 (405)
T KOG1273|consen  206 RKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIW  277 (405)
T ss_pred             ccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEE
Confidence            8999999999999999998652       1211  1221111  12366789999999876653 4457887

>KOG2106|consensus

Probab=99.64  E-value=3.6e-14  Score=108.04  Aligned_cols=152  Identities=18%  Similarity=0.327  Sum_probs=123.5

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      .||....+.++.+|+...++|++.|+.+++|+  ..+...+-. -..++.++.|+|.| .++.|...|...+.|.++.+.
T Consensus       365 ~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~l  440 (626)
T KOG2106|consen  365 QGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDL  440 (626)
T ss_pred             EecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEeccccee
Confidence            58999999999999999999999999999999  444444433 35789999999999 999999999999999887444


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeec-CCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILA-GHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~-~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +.. ..+  ..+++++.|+|+|.+|+.|+.|+.|++|-+... ....... .+..+|..+.|++|+++|.+-+-|-.+..
T Consensus       441 v~~-~~d--~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLy  517 (626)
T KOG2106|consen  441 VTI-HTD--NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILY  517 (626)
T ss_pred             EEE-Eec--CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEE
Confidence            433 222  357899999999999999999999999976543 2222222 23378999999999999999999988888


Q ss_pred             e
Q psy15417        175 W  175 (176)
Q Consensus       175 w  175 (176)
                      |
T Consensus       518 W  518 (626)
T KOG2106|consen  518 W  518 (626)
T ss_pred             E
Confidence            8

>KOG0649|consensus

Probab=99.63  E-value=9.9e-14  Score=97.26  Aligned_cols=148  Identities=18%  Similarity=0.296  Sum_probs=110.5

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~  101 (176)
                      .|++|-..|....++.++.|+.+..||+++|+..+++++|+.-|-++........+++|+.||++|+||.++.+++...+
T Consensus       116 eINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie  195 (325)
T KOG0649|consen  116 EINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIE  195 (325)
T ss_pred             ccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEec
Confidence            58899999887777777789999999999999999999999999999887777789999999999999999998876654


Q ss_pred             ecceEe--------ceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417        102 HDNIIC--------GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus       102 ~~~~~~--------~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      ...+..        =|.+++.  +...+++|+ ...+.+|++...++...++- ...+..+.|-.+  .+++++..++|.
T Consensus       196 ~yk~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse~t~vfpi-pa~v~~v~F~~d--~vl~~G~g~~v~  269 (325)
T KOG0649|consen  196 PYKNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSESTCVFPI-PARVHLVDFVDD--CVLIGGEGNHVQ  269 (325)
T ss_pred             cccChhhcCcccCceeEEEec--cCceEEecC-CCceeEEeccCCCceEEEec-ccceeEeeeecc--eEEEecccccee
Confidence            322111        1344444  445777765 44688999988887776642 244555667543  555666665665


Q ss_pred             Ee
Q psy15417        174 IW  175 (176)
Q Consensus       174 vw  175 (176)
                      -|
T Consensus       270 ~~  271 (325)
T KOG0649|consen  270 SY  271 (325)
T ss_pred             ee
Confidence            44

>KOG1188|consensus

Probab=99.62  E-value=1.4e-14  Score=105.41  Aligned_cols=161  Identities=19%  Similarity=0.303  Sum_probs=117.9

Q ss_pred             ccCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCee--eeEecCCC-CCeeEEEEccCCcEEEEeeC----CCc
Q psy15417         15 AASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSC--KQTFPGHE-SDINAVTFFPNGWAFATGSD----DAT   85 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~~--~~~~~~h~-~~v~~v~~~~~~~~l~s~s~----d~~   85 (176)
                      -+.+|...++.+.|..  ....+.+|+.||+|++||+++...  ...+.+++ .+..+++..-.+..+++|..    +-.
T Consensus        65 ~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~  144 (376)
T KOG1188|consen   65 EFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDAS  144 (376)
T ss_pred             eecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceE
Confidence            3578889999999976  467899999999999999998653  34455555 45556655555666776643    456


Q ss_pred             EEEeeCCCCCe-eeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCce---eeeeecCCCccEEEEEEeCCC
Q psy15417         86 CRLFDIRADQE-LAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTE---RAGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus        86 i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~~  160 (176)
                      +.+||+|..++ +..+ .+.+...|+++.|||.. .+|++|+.||.+.+||++.-.   .+.....|...|.++.|..++
T Consensus       145 v~lwDvR~~qq~l~~~-~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~  223 (376)
T KOG1188|consen  145 VVLWDVRSEQQLLRQL-NESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKK  223 (376)
T ss_pred             EEEEEeccccchhhhh-hhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCC
Confidence            89999998877 4433 23344579999999976 588999999999999976431   222233466678899998665


Q ss_pred             -CEEEEccCCCcEEEeC
Q psy15417        161 -MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 -~~l~tg~~d~~v~vwd  176 (176)
                       +.|.+-+.+.+..+|+
T Consensus       224 ykrI~clTH~Etf~~~e  240 (376)
T KOG1188|consen  224 YKRIMCLTHMETFAIYE  240 (376)
T ss_pred             cceEEEEEccCceeEEE
Confidence             4577778888888884

>KOG1538|consensus

Probab=99.62  E-value=4.5e-14  Score=110.89  Aligned_cols=151  Identities=19%  Similarity=0.366  Sum_probs=116.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~  101 (176)
                      .|+.++|-|||..|+.+..+ .+.+||.+.|....++++|..-|++++++.+|+.|++|+.|..+-+|+.+-+- +..+.
T Consensus        14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG-~LkYS   91 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG-ILKYS   91 (1081)
T ss_pred             chheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc-eeeec
Confidence            78899999999988777645 59999999999999999999999999999999999999999999999854221 11111


Q ss_pred             ecc------------------------------------eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee-
Q psy15417        102 HDN------------------------------------IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-  144 (176)
Q Consensus       102 ~~~------------------------------------~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~-  144 (176)
                      +..                                    ...++.+++|..||++++.|..+|+|.+-+. .++.-..+ 
T Consensus        92 H~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~  170 (1081)
T KOG1538|consen   92 HNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIE  170 (1081)
T ss_pred             cCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEe
Confidence            110                                    1135789999999999999999999999984 44333322 


Q ss_pred             --cCCCccEEEEEEeCCC-----CEEEEccCCCcEEEe
Q psy15417        145 --AGHDNRVSCLGVTEDG-----MAVATGSWDSFLRIW  175 (176)
Q Consensus       145 --~~~~~~i~~~~~~~~~-----~~l~tg~~d~~v~vw  175 (176)
                        .+.+.+|+.++|+|+.     ..++...|..++..+
T Consensus       171 Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy  208 (1081)
T KOG1538|consen  171 RPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFY  208 (1081)
T ss_pred             CCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEE
Confidence              2467789999999863     356677776665543

>KOG0307|consensus

Probab=99.62  E-value=1.6e-15  Score=124.04  Aligned_cols=157  Identities=18%  Similarity=0.265  Sum_probs=123.5

Q ss_pred             ccCeEEEEEcCCCCE----EEEEeCCCeEEEEEcCC---C---eeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEE
Q psy15417         20 TGDVMSLSLAPDMRT----FVSGACDASAKLWDIRD---G---SCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRL   88 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~----l~s~s~dg~v~~wd~~~---~---~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~i   88 (176)
                      ....++++|.+.+..    ++.|..||.|-+||...   +   +.+.++..|+++|.++.|.+. ++.+++|+.||.|.|
T Consensus        64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i  143 (1049)
T KOG0307|consen   64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI  143 (1049)
T ss_pred             cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence            356788999887654    89999999999999865   2   345677889999999999997 569999999999999


Q ss_pred             eeCCCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCc--cEEEEEEeCCC-CEEE
Q psy15417         89 FDIRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDN--RVSCLGVTEDG-MAVA  164 (176)
Q Consensus        89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~--~i~~~~~~~~~-~~l~  164 (176)
                      ||+...+....+........|.+++|+..- .+|++++.++++.|||+++.+++..+..+.+  .++.++|+|+. ..|+
T Consensus       144 WDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~  223 (1049)
T KOG0307|consen  144 WDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL  223 (1049)
T ss_pred             eccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee
Confidence            999875544433333344578899998754 5788899999999999999888888877755  47789999986 3455


Q ss_pred             EccCCC---cEEEeC
Q psy15417        165 TGSWDS---FLRIWN  176 (176)
Q Consensus       165 tg~~d~---~v~vwd  176 (176)
                      +++.|.   .|.+||
T Consensus       224 ~As~dd~~PviqlWD  238 (1049)
T KOG0307|consen  224 VASGDDSAPVIQLWD  238 (1049)
T ss_pred             eecCCCCCceeEeec
Confidence            665554   488887

>KOG1007|consensus

Probab=99.61  E-value=4.4e-14  Score=101.09  Aligned_cols=156  Identities=20%  Similarity=0.267  Sum_probs=117.1

Q ss_pred             CCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCeeeeEec-CCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCC
Q psy15417         17 SGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFP-GHESDINAVTFFPNG-WAFATGSDDATCRLFDIR   92 (176)
Q Consensus        17 ~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~   92 (176)
                      .+|+...++-+|+|  ++..+++.+ |+++..||.++-++...+. .|...|+.+.|.|+. .+|++|++|+.|++||.|
T Consensus       167 ~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R  245 (370)
T KOG1007|consen  167 AEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR  245 (370)
T ss_pred             ccccceecccccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEecc
Confidence            34777888899998  777777765 8999999999877666664 588899999999985 579999999999999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCc-----------------------------eeee
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKT-----------------------------ERAG  142 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~-----------------------------~~~~  142 (176)
                      ..+... .....+.-=+=++.|+|.. .++++|+.|..+.+|....-                             -++.
T Consensus       246 ~tk~pv-~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~  324 (370)
T KOG1007|consen  246 KTKFPV-QELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLE  324 (370)
T ss_pred             CCCccc-cccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccc
Confidence            654322 2222222236678999975 57789999999988862110                             0233


Q ss_pred             eecCCCccEEEEEEeCCCC-EEEEccCCCcEEE
Q psy15417        143 ILAGHDNRVSCLGVTEDGM-AVATGSWDSFLRI  174 (176)
Q Consensus       143 ~~~~~~~~i~~~~~~~~~~-~l~tg~~d~~v~v  174 (176)
                      ++..|...|.+++|+.-.. .+|+=+.||.+-|
T Consensus       325 tydehEDSVY~~aWSsadPWiFASLSYDGRviI  357 (370)
T KOG1007|consen  325 TYDEHEDSVYALAWSSADPWIFASLSYDGRVII  357 (370)
T ss_pred             cccccccceEEEeeccCCCeeEEEeccCceEEe
Confidence            5567899999999986554 5688899998865

>KOG1445|consensus

Probab=99.60  E-value=7.3e-15  Score=114.67  Aligned_cols=160  Identities=18%  Similarity=0.241  Sum_probs=114.3

Q ss_pred             ccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+++|.+.|..+.|+|- ...|+++++|-+|++||+++.+....+.+|++.+.+++|+|+|..+++.+.||++++|+.++
T Consensus       672 ~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs  751 (1012)
T KOG1445|consen  672 ILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRS  751 (1012)
T ss_pred             eeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCC
Confidence            37899999999999994 56899999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCee-eEEeecceEeceEEEEECCCCcEEEEEcCC----CeEEEEeCCCc--eeeeeecCC-CccEEEEEEeCC-CCEEE
Q psy15417         94 DQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDD----FNCNVWDSMKT--ERAGILAGH-DNRVSCLGVTED-GMAVA  164 (176)
Q Consensus        94 ~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d----~~i~v~d~~~~--~~~~~~~~~-~~~i~~~~~~~~-~~~l~  164 (176)
                      .++. ......- ..+-..+.|-.+|+++++.+-|    +++.+||.++-  .++.+..-. ...+.--.+.+| +..++
T Consensus       752 ~e~pv~Eg~gpv-gtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfl  830 (1012)
T KOG1445|consen  752 REQPVYEGKGPV-GTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFL  830 (1012)
T ss_pred             CCCccccCCCCc-cCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEE
Confidence            6542 2211110 0122356777788887665544    46778885442  122221100 011111123344 44567


Q ss_pred             EccCCCcEEEe
Q psy15417        165 TGSWDSFLRIW  175 (176)
Q Consensus       165 tg~~d~~v~vw  175 (176)
                      +|-.|.+|.+|
T Consensus       831 tGKGD~~v~~y  841 (1012)
T KOG1445|consen  831 TGKGDRFVNMY  841 (1012)
T ss_pred             ecCCCceEEEE
Confidence            88889998877

>KOG2110|consensus

Probab=99.60  E-value=1.2e-13  Score=101.48  Aligned_cols=119  Identities=21%  Similarity=0.286  Sum_probs=100.8

Q ss_pred             CccCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCc-EEEeeCCCCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGAC--DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDAT-CRLFDIRADQ   95 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~-i~iwd~~~~~   95 (176)
                      +...+.++++++.+.+++--+.  .|.|.+||..+-+...++..|.+++.+++|+++|.+++++|+-|+ ||++.+.+++
T Consensus       128 n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~  207 (391)
T KOG2110|consen  128 NPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQ  207 (391)
T ss_pred             CccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCcc
Confidence            4445666666666667765433  588999999999999999999999999999999999999999998 7999999999


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~  137 (176)
                      .+..|...-....|.+++|+|++++|.+.+..++|++|.++.
T Consensus       208 kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  208 KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             EeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence            887776555556789999999999999999999999998653

>KOG0642|consensus

Probab=99.60  E-value=2.4e-14  Score=109.92  Aligned_cols=122  Identities=20%  Similarity=0.297  Sum_probs=98.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--------CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD--------GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~--------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      .+..|...|..+.|+|....|++|+.|+++++|+++.        -+.+.+|++|.+||.++++.+++.++++|+.||+|
T Consensus       289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I  368 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI  368 (577)
T ss_pred             eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence            4556889999999999999999999999999999932        24688999999999999999999999999999999


Q ss_pred             EEeeCCCCCee-------e-EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         87 RLFDIRADQEL-------A-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        87 ~iwd~~~~~~~-------~-~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                      +.|++...+..       . .-...++...+-.+++|+....|++++.||+++.|+..
T Consensus       369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~  426 (577)
T KOG0642|consen  369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPT  426 (577)
T ss_pred             eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccC
Confidence            99987532210       1 11122333345568889888889999999999999843

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.59  E-value=1.7e-13  Score=95.94  Aligned_cols=116  Identities=19%  Similarity=0.386  Sum_probs=89.2

Q ss_pred             CccCeEEEEEcCCCCEEEEE--eCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC---CcEEEeeCCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSG--ACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD---ATCRLFDIRA   93 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~--s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d---~~i~iwd~~~   93 (176)
                      ..++|.+++|+|++..|+..  ..++.|.+||++ ++.+..+.  ..+++.+.|+|+|++++.++.+   |.+.+||.++
T Consensus        58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~  134 (194)
T PF08662_consen   58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK  134 (194)
T ss_pred             CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence            34679999999999986554  467889999997 66666664  4678999999999999998764   5699999987


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcC------CCeEEEEeCCCceeee
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYD------DFNCNVWDSMKTERAG  142 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~------d~~i~v~d~~~~~~~~  142 (176)
                      .+.+....+.    .+..++|+|+|++++++..      |..++||+. .++.+.
T Consensus       135 ~~~i~~~~~~----~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~  184 (194)
T PF08662_consen  135 KKKISTFEHS----DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLY  184 (194)
T ss_pred             CEEeeccccC----cEEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeE
Confidence            6666554433    3578999999999988764      567788986 344433

>KOG4227|consensus

Probab=99.58  E-value=9.5e-14  Score=103.20  Aligned_cols=162  Identities=14%  Similarity=0.173  Sum_probs=129.1

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC------CeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD------GSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCR   87 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~------~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~   87 (176)
                      .+.+|.+-|+++.|+.+++.|++|+.|..+++|++..      .+.+..... |.+.+.+++|......+++|+.++++.
T Consensus        51 D~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI  130 (609)
T KOG4227|consen   51 DVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVI  130 (609)
T ss_pred             hhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeE
Confidence            3568999999999999999999999999999999853      244443333 448999999999999999999999999


Q ss_pred             EeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce-eee-eecCCC-ccEEEEEEeCC-CCEE
Q psy15417         88 LFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE-RAG-ILAGHD-NRVSCLGVTED-GMAV  163 (176)
Q Consensus        88 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~-~~~-~~~~~~-~~i~~~~~~~~-~~~l  163 (176)
                      +.|+.+.+.+.++.+......|.-+..||..++|++.+.++.+.+||..... +.. .+.+.. .....+.|.|. ...|
T Consensus       131 ~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li  210 (609)
T KOG4227|consen  131 KHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALI  210 (609)
T ss_pred             eeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeE
Confidence            9999999888888777655678888999999999999999999999976543 222 122222 23566778886 4567


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      ++.+..+-+-+||
T Consensus       211 ~~~~~~~G~~~~D  223 (609)
T KOG4227|consen  211 LVNSETGGPNVFD  223 (609)
T ss_pred             EeccccCCCCcee
Confidence            8888888888886

>KOG0270|consensus

Probab=99.58  E-value=1.4e-13  Score=103.12  Aligned_cols=157  Identities=23%  Similarity=0.391  Sum_probs=114.4

Q ss_pred             CCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCC
Q psy15417         17 SGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~   93 (176)
                      +-|.+.|.++.|+|. ...|++|+.|++|.+.|.+... ....++ -.+.|..++|.|. ...++++..||+++-+|+|+
T Consensus       283 ~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~  361 (463)
T KOG0270|consen  283 THHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRN  361 (463)
T ss_pred             hhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEEEecCCCceeEEEecCCceEEeeecCC
Confidence            458899999999984 6799999999999999998432 222232 3567999999986 45788888999999999998


Q ss_pred             CCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCC---CccEEEEEEeCCC-CEEEEccC
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGH---DNRVSCLGVTEDG-MAVATGSW  168 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~---~~~i~~~~~~~~~-~~l~tg~~  168 (176)
                      ... ..+....+..+|+++.+++.- .+++++++++.+++|++....+-.. ..|   -+...|.++.|+- -.+|.|+.
T Consensus       362 ~~~-~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v-~~~~~~~~rl~c~~~~~~~a~~la~GG~  439 (463)
T KOG0270|consen  362 PGK-PVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSV-KEHSFKLGRLHCFALDPDVAFTLAFGGE  439 (463)
T ss_pred             CCC-ceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccc-ccccccccceeecccCCCcceEEEecCc
Confidence            742 233333334578888888765 4678899999999999654332111 112   1235677777764 45788888


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      .+.++|||
T Consensus       440 k~~~~vwd  447 (463)
T KOG0270|consen  440 KAVLRVWD  447 (463)
T ss_pred             cceEEEee
Confidence            88999997

>KOG1009|consensus

Probab=99.58  E-value=1.5e-14  Score=107.18  Aligned_cols=151  Identities=24%  Similarity=0.308  Sum_probs=116.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC--------C--------CeeeeEecCCCCCeeEEEEccCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR--------D--------GSCKQTFPGHESDINAVTFFPNGWAFA   78 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~--------~--------~~~~~~~~~h~~~v~~v~~~~~~~~l~   78 (176)
                      ++++|...|+++.|+|+|.+|++|+.+|.|.+|...        +        ....+.+.+|...+..++|+|++..++
T Consensus        60 ~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~  139 (434)
T KOG1009|consen   60 SLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLV  139 (434)
T ss_pred             cccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceee
Confidence            478899999999999999999999999999999865        2        124567788999999999999999999


Q ss_pred             EeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee-----e---------
Q psy15417         79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-----L---------  144 (176)
Q Consensus        79 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~-----~---------  144 (176)
                      +++-|.++++||+..++......  .+..-++-++|.|-.+++++-+.|...+++++........     +         
T Consensus       140 s~s~dns~~l~Dv~~G~l~~~~~--dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e  217 (434)
T KOG1009|consen  140 SGSVDNSVRLWDVHAGQLLAILD--DHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNERE  217 (434)
T ss_pred             eeeccceEEEEEeccceeEeecc--ccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCC
Confidence            99999999999999887765432  2223577899999999998888888676666432211110     0         


Q ss_pred             -----cCCCc----cEEEEEEeCCCCEEEEcc
Q psy15417        145 -----AGHDN----RVSCLGVTEDGMAVATGS  167 (176)
Q Consensus       145 -----~~~~~----~i~~~~~~~~~~~l~tg~  167 (176)
                           .-|.+    ....++|+|+|..+++.+
T Consensus       218 ~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa  249 (434)
T KOG1009|consen  218 GKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA  249 (434)
T ss_pred             cceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence                 01222    245678999999988774

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.58  E-value=1.1e-12  Score=99.47  Aligned_cols=159  Identities=31%  Similarity=0.582  Sum_probs=127.8

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-eeeEecCCC-CCeeEEEE-ccCCc-EEEEeeC-CCcEEEee
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHE-SDINAVTF-FPNGW-AFATGSD-DATCRLFD   90 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~-~~v~~v~~-~~~~~-~l~s~s~-d~~i~iwd   90 (176)
                      ..+|...+.++.|.+.+..++.++.|+.+.+|+...+. ....+.++. ..+..+.+ .+++. .+...+. |+.+.+|+
T Consensus        61 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  140 (466)
T COG2319          61 LRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWD  140 (466)
T ss_pred             eeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEE
Confidence            45799999999999999999999999999999998886 666776644 36777777 77776 5555455 89999999


Q ss_pred             CCC-CCeeeEEeecceEeceEEEEECCCCcEEEEEcC-CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEcc
Q psy15417         91 IRA-DQELAMYSHDNIICGITSVAFSRSGRLLLAGYD-DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGS  167 (176)
Q Consensus        91 ~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~  167 (176)
                      ... ........  .+...+..+.|+|++..++.+.. ++.+++|+....+....+.+|...+.+++++|++. .+++++
T Consensus       141 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  218 (466)
T COG2319         141 LSTPGKLIRTLE--GHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGS  218 (466)
T ss_pred             ecCCCeEEEEEe--cCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEec
Confidence            876 33333222  22245778999999998888875 99999999888788888888999999999999987 566669


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      .|+.+++||
T Consensus       219 ~d~~i~~wd  227 (466)
T COG2319         219 SDGTIRLWD  227 (466)
T ss_pred             CCCcEEEEE
Confidence            999999994

>KOG4378|consensus

Probab=99.58  E-value=1.4e-14  Score=110.07  Aligned_cols=151  Identities=17%  Similarity=0.252  Sum_probs=123.2

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN  104 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~  104 (176)
                      |+.......++++|+..+.|+|||++...+.+.+++|+..|+++.+.-...++++++..|.|.+..+.+++....+....
T Consensus        84 Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s  163 (673)
T KOG4378|consen   84 CVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS  163 (673)
T ss_pred             HHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC
Confidence            44434455899999999999999999777888999999999999999999999999999999999998877666665553


Q ss_pred             eEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCC-CEEEEccCCCcEEEeC
Q psy15417        105 IICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDG-MAVATGSWDSFLRIWN  176 (176)
Q Consensus       105 ~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~-~~l~tg~~d~~v~vwd  176 (176)
                      . ..+--+.|+|..+ .|.+++.+|.+.+||.....+.. ....|..+...++|+|.. ..|++.+.|..|.+||
T Consensus       164 g-qsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD  237 (673)
T KOG4378|consen  164 G-QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYD  237 (673)
T ss_pred             C-CeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEee
Confidence            2 2345678999876 55678999999999976654443 345788888899999964 5678999999999997

>KOG0974|consensus

Probab=99.57  E-value=6.5e-14  Score=113.85  Aligned_cols=146  Identities=20%  Similarity=0.333  Sum_probs=120.2

Q ss_pred             EEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceE
Q psy15417         27 SLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII  106 (176)
Q Consensus        27 ~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~  106 (176)
                      -++++..++++|+.-+.+.+|++...+....+.+|.+.+-++.++.+|.+++++|+|+++|+|++.+.+......+.+ .
T Consensus       140 g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgH-s  218 (967)
T KOG0974|consen  140 GDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGH-S  218 (967)
T ss_pred             eccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccc-c
Confidence            356777899999999999999997443333688999999999999999999999999999999998876654222322 2


Q ss_pred             eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        107 CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       107 ~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .++-.+.|+|+  .+++++.|.++++|+ ..++.+..+.+|.. .++.+++.++...++|++.|+.+++||
T Consensus       219 aRvw~~~~~~n--~i~t~gedctcrvW~-~~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~  286 (967)
T KOG0974|consen  219 ARVWACCFLPN--RIITVGEDCTCRVWG-VNGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWD  286 (967)
T ss_pred             ceeEEEEeccc--eeEEeccceEEEEEe-cccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhh
Confidence            45667788887  899999999999997 45566667888865 589999999988999999999999996

>KOG2110|consensus

Probab=99.56  E-value=1.3e-12  Score=96.20  Aligned_cols=150  Identities=17%  Similarity=0.199  Sum_probs=113.9

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC---CCCCeeEEEEccCCcEEE-EeeCC-CcEEEeeCCCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---HESDINAVTFFPNGWAFA-TGSDD-ATCRLFDIRADQ   95 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~---h~~~v~~v~~~~~~~~l~-s~s~d-~~i~iwd~~~~~   95 (176)
                      .+|.++.+..  +.|+++=.+ .|.+||+++-+.+.++..   +...+.++.+++.+.+++ -++.+ |.|.+||..+-+
T Consensus        88 t~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~  164 (391)
T KOG2110|consen   88 TSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQ  164 (391)
T ss_pred             CceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccce
Confidence            4566666653  445565544 499999999888776654   445566666666555554 34443 789999998776


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCe-EEEEeCCCceeeeeecCCC--ccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN-CNVWDSMKTERAGILAGHD--NRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~-i~v~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ......  .|...+.+++|+++|.+++++++.|+ |||+.+..++.+.+++.-.  -.|.+++|+|++.+|++.|..++|
T Consensus       165 ~v~~I~--aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTV  242 (391)
T KOG2110|consen  165 PVNTIN--AHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETV  242 (391)
T ss_pred             eeeEEE--ecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeE
Confidence            665544  33457899999999999999999998 7999999999888886433  358899999999999999999999


Q ss_pred             EEe
Q psy15417        173 RIW  175 (176)
Q Consensus       173 ~vw  175 (176)
                      +||
T Consensus       243 HiF  245 (391)
T KOG2110|consen  243 HIF  245 (391)
T ss_pred             EEE
Confidence            998

>KOG1272|consensus

Probab=99.56  E-value=1.8e-14  Score=108.57  Aligned_cols=151  Identities=15%  Similarity=0.231  Sum_probs=128.3

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec----------------------------------CC----CCCe
Q psy15417         24 MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP----------------------------------GH----ESDI   65 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~----------------------------------~h----~~~v   65 (176)
                      +.++|+.+|++++.|+..|.+..+|..+.++...+.                                  -|    ...|
T Consensus       133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElHClk~~~~v  212 (545)
T KOG1272|consen  133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELHCLKRHIRV  212 (545)
T ss_pred             eeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEeehhhcCch
Confidence            578999999999999999999999998877655443                                  01    2467


Q ss_pred             eEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec
Q psy15417         66 NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA  145 (176)
Q Consensus        66 ~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~  145 (176)
                      ..+.|.|..-+|++++..|.++.-|+..++.+..+....  ..+..+.-+|-.-++-.|..+|++.+|.-...+++..+.
T Consensus       213 ~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~--G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiL  290 (545)
T KOG1272|consen  213 ARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGA--GRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKIL  290 (545)
T ss_pred             hhhcccchhheeeecccCCceEEEeechhhhhHHHHccC--CccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHH
Confidence            888999999999999999999999998888776655433  234456667777788889999999999988889999999


Q ss_pred             CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        146 GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       146 ~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .|.+.|+++|+.++|.|+||.|.|+.|+|||
T Consensus       291 cH~g~V~siAv~~~G~YMaTtG~Dr~~kIWD  321 (545)
T KOG1272|consen  291 CHRGPVSSIAVDRGGRYMATTGLDRKVKIWD  321 (545)
T ss_pred             hcCCCcceEEECCCCcEEeecccccceeEee
Confidence            9999999999999999999999999999998

>KOG1445|consensus

Probab=99.55  E-value=2.1e-14  Score=112.17  Aligned_cols=137  Identities=18%  Similarity=0.236  Sum_probs=108.2

Q ss_pred             eCCCeEEEEEcCCCeee-----eEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCCCeee-----EEeecceEe
Q psy15417         39 ACDASAKLWDIRDGSCK-----QTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQELA-----MYSHDNIIC  107 (176)
Q Consensus        39 s~dg~v~~wd~~~~~~~-----~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~-----~~~~~~~~~  107 (176)
                      +.-|.|.||+++..-.+     ..+. ....|+.+.|.| |...|+.+++||.|++|-+..+....     ......+..
T Consensus       600 g~gG~iai~el~~PGrLPDgv~p~l~-Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~e  678 (1012)
T KOG1445|consen  600 GSGGVIAIYELNEPGRLPDGVMPGLF-NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGE  678 (1012)
T ss_pred             CCCceEEEEEcCCCCCCCcccccccc-cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccc
Confidence            44688999999764221     1221 346799999999 67889999999999999986532110     011112234


Q ss_pred             ceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        108 GITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       108 ~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .|.++.|||- ..+|++++.|.+|++||+...+....+.+|.+.|..+||+|+|..+|+.+.||+++||+
T Consensus       679 KI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~  748 (1012)
T KOG1445|consen  679 KITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYE  748 (1012)
T ss_pred             eEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeC
Confidence            6889999996 46889999999999999999888889999999999999999999999999999999984

>KOG0644|consensus

Probab=99.53  E-value=1e-14  Score=116.55  Aligned_cols=153  Identities=23%  Similarity=0.381  Sum_probs=120.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +.||...|+|+.|...|.++++|+.|..||||-..++.|...++||.+.++.++.+.+...++++|.|.-|++|-+..+.
T Consensus       186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~  265 (1113)
T KOG0644|consen  186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGA  265 (1113)
T ss_pred             HHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCc
Confidence            56899999999999999999999999999999999999999999999999999999888899999999999999999887


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC-----CCccEEEEEEeCCCCEEEEccCCC
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG-----HDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      .+.+.  ..+...|++++|+|..    +.+.||++++||.. .++....+.     -...+..+-|-.++.-++||+.|+
T Consensus       266 pvsvL--rghtgavtaiafsP~~----sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~  338 (1113)
T KOG0644|consen  266 PVSVL--RGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDG  338 (1113)
T ss_pred             hHHHH--hccccceeeeccCccc----cCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccccccccccCCc
Confidence            76543  2233568999999965    67899999999964 222221110     112234444555666677887777


Q ss_pred             cEEEe
Q psy15417        171 FLRIW  175 (176)
Q Consensus       171 ~v~vw  175 (176)
                      .-+.|
T Consensus       339 ea~n~  343 (1113)
T KOG0644|consen  339 EARNH  343 (1113)
T ss_pred             ccccc
Confidence            65544

>KOG1524|consensus

Probab=99.53  E-value=1.1e-13  Score=106.16  Aligned_cols=138  Identities=19%  Similarity=0.368  Sum_probs=98.7

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ...|.+.|.|-.|+|||.-|++++.||.|++|. ++|-+..++.....+|.|++|.|+.+.++-+.. +.+.|=.+....
T Consensus       100 v~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~  177 (737)
T KOG1524|consen  100 ISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPLAANS  177 (737)
T ss_pred             hhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeeccccc
Confidence            357999999999999999999999999999997 456555566667789999999998665444422 345554555444


Q ss_pred             eeeEEe-ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC
Q psy15417         96 ELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED  159 (176)
Q Consensus        96 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~  159 (176)
                      .+..+. ++   .-|.++.|+|...++++|++|...++||. -+..+.....|..+|++++|.|+
T Consensus       178 k~i~WkAHD---GiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd  238 (737)
T KOG1524|consen  178 KIIRWRAHD---GLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFNPE  238 (737)
T ss_pred             ceeEEeccC---cEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhccceeeeeeccc
Confidence            444443 33   34789999999999999999999999994 33333333344444444444444

>KOG2111|consensus

Probab=99.53  E-value=1.3e-12  Score=94.52  Aligned_cols=153  Identities=13%  Similarity=0.140  Sum_probs=108.9

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CeeeeEecC--CCCCeeEEEEccCCcE-EEEeeCCCcEEEeeCCCCC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-GSCKQTFPG--HESDINAVTFFPNGWA-FATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~~~--h~~~v~~v~~~~~~~~-l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..+|.++.+.++.  +++.- ...|.+|.+.. .+.+..+..  .+..+.+++-+.+... .+-|-.-|.|++-|+....
T Consensus        94 ~~~I~~V~l~r~r--iVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~  170 (346)
T KOG2111|consen   94 NSEIKAVKLRRDR--IVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTK  170 (346)
T ss_pred             ccceeeEEEcCCe--EEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcC
Confidence            5788888887664  33333 56799999974 444444432  1233443333333333 3445566899999986554


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCe-EEEEeCCCceeeeeecCC--CccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN-CNVWDSMKTERAGILAGH--DNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~-i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      .-.....+.+...|.+++.+.+|..+++++..|+ |||||.+.++++.+++.-  ...|.|++|+|+..+||..|+-|++
T Consensus       171 ~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTl  250 (346)
T KOG2111|consen  171 PNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTL  250 (346)
T ss_pred             cCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeE
Confidence            3111222233457899999999999999999998 899999999998888643  3469999999999999999999999


Q ss_pred             EEe
Q psy15417        173 RIW  175 (176)
Q Consensus       173 ~vw  175 (176)
                      +||
T Consensus       251 HiF  253 (346)
T KOG2111|consen  251 HIF  253 (346)
T ss_pred             EEE
Confidence            998

>KOG1517|consensus

Probab=99.53  E-value=2.2e-13  Score=111.46  Aligned_cols=154  Identities=20%  Similarity=0.293  Sum_probs=116.4

Q ss_pred             ccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCe---eeeEecCCCCC--eeEEEEccCCc-EEEEeeCCCcEEEeeCC
Q psy15417         20 TGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGS---CKQTFPGHESD--INAVTFFPNGW-AFATGSDDATCRLFDIR   92 (176)
Q Consensus        20 ~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~~~--v~~v~~~~~~~-~l~s~s~d~~i~iwd~~   92 (176)
                      +.-|+++.-+. .|..+++|-.||.|++||.+...   .+..++.|...  |..+.+.+.|- .+++|+.+|.|++||+|
T Consensus      1208 ~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR 1287 (1387)
T KOG1517|consen 1208 STLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLR 1287 (1387)
T ss_pred             CccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecc
Confidence            34455554432 46899999999999999998653   46788889876  99999988764 59999999999999999


Q ss_pred             CCCeeeEEeecc-e--EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-------CccEEEEEEeCCCCE
Q psy15417         93 ADQELAMYSHDN-I--ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-------DNRVSCLGVTEDGMA  162 (176)
Q Consensus        93 ~~~~~~~~~~~~-~--~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~  162 (176)
                      .+.......... .  -...+++..|+..+++++|+. +.|+||++ .++++..+..+       .+.+.|++|+|....
T Consensus      1288 ~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~-~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~l 1365 (1387)
T KOG1517|consen 1288 MSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSL-SGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLL 1365 (1387)
T ss_pred             cCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEec-ChhhhcccccCcccccCcCCCcceeeecchhHh
Confidence            742221111110 0  013788999999999999998 89999995 45555444322       345799999999999


Q ss_pred             EEEccCCCcEEEe
Q psy15417        163 VATGSWDSFLRIW  175 (176)
Q Consensus       163 l~tg~~d~~v~vw  175 (176)
                      +|.|+.|.+|-||
T Consensus      1366 lAaG~~Ds~V~iY 1378 (1387)
T KOG1517|consen 1366 LAAGSADSTVSIY 1378 (1387)
T ss_pred             hhhccCCceEEEe
Confidence            9999999999987

>KOG2919|consensus

Probab=99.53  E-value=4.2e-13  Score=97.43  Aligned_cols=155  Identities=23%  Similarity=0.398  Sum_probs=120.6

Q ss_pred             cCeEEEEEc-------CCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--CCCC---eeEEEEccCCcEEEEeeCCCcEEE
Q psy15417         21 GDVMSLSLA-------PDMRTFVSGACDASAKLWDIRDGSCKQTFPG--HESD---INAVTFFPNGWAFATGSDDATCRL   88 (176)
Q Consensus        21 ~~V~~~~~~-------~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--h~~~---v~~v~~~~~~~~l~s~s~d~~i~i   88 (176)
                      +.|+..+|-       |+..++++.+.+.-|++||+-+|+....+++  |...   --+++|+|||.+|++| ..+.|++
T Consensus       105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirv  183 (406)
T KOG2919|consen  105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRV  183 (406)
T ss_pred             CEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEE
Confidence            345665554       5677999999999999999999998887776  3333   3579999999999987 4579999


Q ss_pred             eeC-CCCCeeeEEe-----ecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC
Q psy15417         89 FDI-RADQELAMYS-----HDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM  161 (176)
Q Consensus        89 wd~-~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  161 (176)
                      +|+ |.+.....+.     ......-+++++|+|-.. .++.|+...++-||.-....++..+-+|.+.|+.+.|.++|+
T Consensus       184 Fdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn  263 (406)
T KOG2919|consen  184 FDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGN  263 (406)
T ss_pred             eeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcC
Confidence            998 4432211111     122234478899999765 889999999988888777888888899999999999999999


Q ss_pred             EEEEccC-CCcEEEeC
Q psy15417        162 AVATGSW-DSFLRIWN  176 (176)
Q Consensus       162 ~l~tg~~-d~~v~vwd  176 (176)
                      .|.+|+. |-.|..||
T Consensus       264 ~lfsGaRk~dkIl~WD  279 (406)
T KOG2919|consen  264 KLFSGARKDDKILCWD  279 (406)
T ss_pred             eecccccCCCeEEEEe
Confidence            9999986 55788887

>KOG0650|consensus

Probab=99.53  E-value=9.1e-14  Score=107.71  Aligned_cols=155  Identities=15%  Similarity=0.177  Sum_probs=128.2

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACD---ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~d---g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .|...|..+.|+..|.+|++...+   ..|.|.++...+.+..|+...+.|..+.|+|...+|+.+.+ +.|++||+...
T Consensus       519 ~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kq  597 (733)
T KOG0650|consen  519 KHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQ  597 (733)
T ss_pred             ecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHH
Confidence            478899999999999999988764   45889999888777788777788999999999888888865 68999998653


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      ..+...-...  .-++.+++||.|..++.|+.|+.+..+|+... ++..++..|...+..++|++.-..+++|+.|+++.
T Consensus       598 elvKkL~tg~--kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~  675 (733)
T KOG0650|consen  598 ELVKKLLTGS--KWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVI  675 (733)
T ss_pred             HHHHHHhcCC--eeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEE
Confidence            3322211111  23678999999999999999999999998754 67778888999999999999999999999999998


Q ss_pred             Ee
Q psy15417        174 IW  175 (176)
Q Consensus       174 vw  175 (176)
                      ||
T Consensus       676 Vf  677 (733)
T KOG0650|consen  676 VF  677 (733)
T ss_pred             EE
Confidence            87

>KOG0771|consensus

Probab=99.52  E-value=4.1e-13  Score=99.96  Aligned_cols=158  Identities=22%  Similarity=0.268  Sum_probs=117.8

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCC-----cEEEEeeCCCcEEE
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNG-----WAFATGSDDATCRL   88 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~-----~~l~s~s~d~~i~i   88 (176)
                      ...|.+.|.+++|+||++.|++-+.| ...+|+.+++.++....  .-+.....+.|..++     ..++.-...+.++.
T Consensus       182 e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~  260 (398)
T KOG0771|consen  182 EIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRL  260 (398)
T ss_pred             hHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeE
Confidence            45799999999999999999999999 89999999996554443  223556678888776     33344444567888


Q ss_pred             eeCCCCC---eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee-cCCCccEEEEEEeCCCCEEE
Q psy15417         89 FDIRADQ---ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        89 wd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~  164 (176)
                      |++....   .+...........+++++++++|++++.|+-+|.+.|++..+-+..... ..|...|+.+.|+|+..+++
T Consensus       261 ~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~  340 (398)
T KOG0771|consen  261 CDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLA  340 (398)
T ss_pred             EEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCccc
Confidence            7763221   1111122222246889999999999999999999999997766555433 47889999999999999999


Q ss_pred             EccCCCcEEE
Q psy15417        165 TGSWDSFLRI  174 (176)
Q Consensus       165 tg~~d~~v~v  174 (176)
                      +.+.|...+|
T Consensus       341 svSs~~~~~v  350 (398)
T KOG0771|consen  341 SVSSDNEAAV  350 (398)
T ss_pred             ccccCCceeE
Confidence            8888877665

>KOG0644|consensus

Probab=99.51  E-value=1.4e-14  Score=115.85  Aligned_cols=168  Identities=22%  Similarity=0.470  Sum_probs=121.1

Q ss_pred             ccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC
Q psy15417          3 DHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD   82 (176)
Q Consensus         3 ~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~   82 (176)
                      |+.++.+.+.  ...||++.|+.++.+.+..+++++|+|..|++|.+..+..+..+++|++.|++++|+|-.    +.+.
T Consensus       217 wS~et~~~lA--s~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~  290 (1113)
T KOG0644|consen  217 WSMETARCLA--SCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSD  290 (1113)
T ss_pred             eeccchhhhc--cCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCC
Confidence            3444444443  568999999999999999999999999999999999999999999999999999999865    7789


Q ss_pred             CCcEEEeeCCCCCeeeE----------------Eee--c-------ce---EeceEEEEECCCCc-----------EEEE
Q psy15417         83 DATCRLFDIRADQELAM----------------YSH--D-------NI---ICGITSVAFSRSGR-----------LLLA  123 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~----------------~~~--~-------~~---~~~v~~~~~~~~~~-----------~l~~  123 (176)
                      ||++++||.+-......                +..  .       ..   .-...+++++..+.           +.++
T Consensus       291 dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~  370 (1113)
T KOG0644|consen  291 DGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVT  370 (1113)
T ss_pred             CCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEecccccccccee
Confidence            99999999872111000                000  0       00   00011122222222           2333


Q ss_pred             EcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEEeC
Q psy15417        124 GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN  176 (176)
Q Consensus       124 g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vwd  176 (176)
                      .-.+..+.+|++..+.......+|...+..+.++|=...+ .+++.||...|||
T Consensus       371 ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwd  424 (1113)
T KOG0644|consen  371 ARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWD  424 (1113)
T ss_pred             eeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeee
Confidence            3445567788888887777778899999999999865554 4889999999997

>KOG3881|consensus

Probab=99.50  E-value=1.7e-12  Score=96.12  Aligned_cols=153  Identities=18%  Similarity=0.275  Sum_probs=119.2

Q ss_pred             CeEEEEEcCCC-CEEEEEeCC--CeEEEEEcCCCeeeeEecCC---------CCCeeEEEEccC--CcEEEEeeCCCcEE
Q psy15417         22 DVMSLSLAPDM-RTFVSGACD--ASAKLWDIRDGSCKQTFPGH---------ESDINAVTFFPN--GWAFATGSDDATCR   87 (176)
Q Consensus        22 ~V~~~~~~~~~-~~l~s~s~d--g~v~~wd~~~~~~~~~~~~h---------~~~v~~v~~~~~--~~~l~s~s~d~~i~   87 (176)
                      .+..+.-++.. ..+++|+..  ..+++||+...+.+..-+-.         +-..+++.|.|.  ...|+++..-+.++
T Consensus       150 g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR  229 (412)
T KOG3881|consen  150 GLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVR  229 (412)
T ss_pred             ceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEE
Confidence            34445555543 456668888  77899999877444332211         123567899887  88999999999999


Q ss_pred             EeeCCCCC-eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCCCEEEE
Q psy15417         88 LFDIRADQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        88 iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      +||.+... ++..+.+.  ..+++++...|+++.+++|...+.+..||+.+++.... +.+..+.++.+-.+|++.++|+
T Consensus       230 ~YDt~~qRRPV~~fd~~--E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las  307 (412)
T KOG3881|consen  230 LYDTRHQRRPVAQFDFL--ENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLAS  307 (412)
T ss_pred             EecCcccCcceeEeccc--cCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEe
Confidence            99987432 23344333  35789999999999999999999999999988877765 7788899999999999999999


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      ||-|+.+||+|
T Consensus       308 ~GLDRyvRIhD  318 (412)
T KOG3881|consen  308 CGLDRYVRIHD  318 (412)
T ss_pred             eccceeEEEee
Confidence            99999999997

>KOG1524|consensus

Probab=99.49  E-value=2.9e-13  Score=104.02  Aligned_cols=139  Identities=14%  Similarity=0.227  Sum_probs=110.0

Q ss_pred             CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEE
Q psy15417         33 RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSV  112 (176)
Q Consensus        33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~  112 (176)
                      ..|+.++.||...+.+ ++++..+.+..|.+.+.+..|+|+|.-|++++.||.|++|. +++.........  ..+|.|+
T Consensus        76 d~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~--~~~v~c~  151 (737)
T KOG1524|consen   76 DTLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQN--EESIRCA  151 (737)
T ss_pred             ceEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhc--CceeEEE
Confidence            5788999999998886 45666777888999999999999999999999999999997 555432222211  2468899


Q ss_pred             EECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       113 ~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +|.|+...++-+. .+.+.+-.+.....+-.-.+|.+-|.++.|++..+.+++|+.|-..+|||
T Consensus       152 ~W~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD  214 (737)
T KOG1524|consen  152 RWAPNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWD  214 (737)
T ss_pred             EECCCCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeec
Confidence            9999976555443 33565666555555555678999999999999999999999999999998

>KOG2321|consensus

Probab=99.48  E-value=1.5e-12  Score=100.77  Aligned_cols=165  Identities=18%  Similarity=0.318  Sum_probs=126.8

Q ss_pred             cccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe------cCCCC-----CeeEEEEcc
Q psy15417          4 HLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF------PGHES-----DINAVTFFP   72 (176)
Q Consensus         4 ~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~------~~h~~-----~v~~v~~~~   72 (176)
                      |+|+++.+.++..  ..+.++++..++-..+|++|+.+|.|.+||.++-....++      ..|.+     .|+++.|+.
T Consensus       161 NLEqGrfL~P~~~--~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d  238 (703)
T KOG2321|consen  161 NLEQGRFLNPFET--DSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRD  238 (703)
T ss_pred             Ecccccccccccc--ccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecC
Confidence            5788888886544  4589999999999999999999999999999875433332      23433     499999999


Q ss_pred             CCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCC--cEEEEEcCCCeEEEEeCCCceeeeeecCCCcc
Q psy15417         73 NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG--RLLLAGYDDFNCNVWDSMKTERAGILAGHDNR  150 (176)
Q Consensus        73 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~  150 (176)
                      +|-.++.|..+|.+.|||+++.+++..-.+... .+|..+.|.+.+  ..+++ .....++|||-..+++...+.. ...
T Consensus       239 ~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e-~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asiEp-t~~  315 (703)
T KOG2321|consen  239 DGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYE-LPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMASIEP-TSD  315 (703)
T ss_pred             CceeEEeeccCCcEEEEEcccCCceeecccCCc-cceeeecccccCCCceEEe-cchHHhhhcccccCCceeeccc-cCC
Confidence            999999999999999999998887655444433 467788887763  34444 3566799999888888777653 334


Q ss_pred             EEEEEEeCCCCEEEEccCCCcEE
Q psy15417        151 VSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus       151 i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      +..+++-|++.++.++-.+..+.
T Consensus       316 lND~C~~p~sGm~f~Ane~~~m~  338 (703)
T KOG2321|consen  316 LNDFCFVPGSGMFFTANESSKMH  338 (703)
T ss_pred             cCceeeecCCceEEEecCCCcce
Confidence            77788889988888887766554

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.47  E-value=4e-12  Score=99.34  Aligned_cols=150  Identities=19%  Similarity=0.265  Sum_probs=96.8

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCee--eeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACD---ASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGS-DDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~d---g~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~i   88 (176)
                      .+++|...+....|+||++.++..+.+   ..|.+||+.+++.  +..+.+|   ...++|+|+|+.|+.++ .++...+
T Consensus       198 ~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~I  274 (429)
T PRK01742        198 IVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLNI  274 (429)
T ss_pred             EeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEEE
Confidence            356788889999999999999887654   3699999988753  3334443   34689999998877664 6787666


Q ss_pred             e--eCCCCCeeeEEeecceEeceEEEEECCCCcEEEE-EcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEE
Q psy15417         89 F--DIRADQELAMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        89 w--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      |  |+.++.........   ..+....|+||++.++. ...++..++|++... .....+ .+..  ...+|+|+|..|+
T Consensus       275 y~~d~~~~~~~~lt~~~---~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia  348 (429)
T PRK01742        275 YVMGANGGTPSQLTSGA---GNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLV  348 (429)
T ss_pred             EEEECCCCCeEeeccCC---CCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEE
Confidence            5  55554432222211   23456889999986654 445677788864321 111112 2332  3456888888887


Q ss_pred             EccCCCcEE
Q psy15417        165 TGSWDSFLR  173 (176)
Q Consensus       165 tg~~d~~v~  173 (176)
                      ..+.++.++
T Consensus       349 ~~~~~~i~~  357 (429)
T PRK01742        349 MINGDNVVK  357 (429)
T ss_pred             EEcCCCEEE
Confidence            776654333

>KOG1517|consensus

Probab=99.46  E-value=3.1e-12  Score=104.88  Aligned_cols=174  Identities=16%  Similarity=0.245  Sum_probs=117.7

Q ss_pred             CccccccccCCCcccCC-CccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcC-----CCeeeeEecC---C----CCCee
Q psy15417          2 CDHLDKSALLGSPAASG-HTGDVMSLSLAP--DMRTFVSGACDASAKLWDIR-----DGSCKQTFPG---H----ESDIN   66 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~g-h~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~-----~~~~~~~~~~---h----~~~v~   66 (176)
                      +++.++...+..+.+.. ....|+.+.+-.  |..++++|+.||.|++|+-.     +.+.+..+.+   +    .+.=.
T Consensus      1090 vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~ 1169 (1387)
T KOG1517|consen 1090 VWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGL 1169 (1387)
T ss_pred             EEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCe
Confidence            34556666666665432 335788888865  45689999999999999742     2233433332   1    11112


Q ss_pred             EEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEE-CCCCcEEEEEcCCCeEEEEeCCCce---eee
Q psy15417         67 AVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAF-SRSGRLLLAGYDDFNCNVWDSMKTE---RAG  142 (176)
Q Consensus        67 ~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~g~~d~~i~v~d~~~~~---~~~  142 (176)
                      =+.|....-+|+++|.-+.|+|||...++...-.+.... +.+++++- .+.|.++++|.+||.+++||.+-..   .+.
T Consensus      1170 v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~-t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~ 1248 (1387)
T KOG1517|consen 1170 VVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSS-TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVC 1248 (1387)
T ss_pred             eeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCC-ccceeecccccCCceEEEeecCCceEEeecccCCccccce
Confidence            256666555666666788999999987776655444322 33444432 2247899999999999999955332   355


Q ss_pred             eecCCCcc--EEEEEEeCCCCE-EEEccCCCcEEEeC
Q psy15417        143 ILAGHDNR--VSCLGVTEDGMA-VATGSWDSFLRIWN  176 (176)
Q Consensus       143 ~~~~~~~~--i~~~~~~~~~~~-l~tg~~d~~v~vwd  176 (176)
                      ....|+..  |..+.+-++|-. |++|+.||.|++||
T Consensus      1249 ~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~D 1285 (1387)
T KOG1517|consen 1249 VYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLD 1285 (1387)
T ss_pred             eecccCCcccceeEEeecCCCcceeeeccCCeEEEEe
Confidence            56678776  888899887654 89999999999997

>KOG2394|consensus

Probab=99.45  E-value=2.1e-12  Score=99.21  Aligned_cols=147  Identities=20%  Similarity=0.311  Sum_probs=110.4

Q ss_pred             cCCCCEEEEEeCCCeEEEEEcCCCeeeeEec----CCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCC-----------
Q psy15417         29 APDMRTFVSGACDASAKLWDIRDGSCKQTFP----GHESDINAVTFFPNG-WAFATGSDDATCRLFDIR-----------   92 (176)
Q Consensus        29 ~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~----~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~-----------   92 (176)
                      .|.+.-|+.|-..|.|++.|....+..+.+.    ..+..|+++.|.|.+ ..|+.+-.+|.+.++|..           
T Consensus       182 ~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~  261 (636)
T KOG2394|consen  182 TPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQ  261 (636)
T ss_pred             CCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCccc
Confidence            3556678888888999998876533222222    134789999999964 567777788999988642           


Q ss_pred             ---CCCeeeEEeec-----c-------eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417         93 ---ADQELAMYSHD-----N-------IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT  157 (176)
Q Consensus        93 ---~~~~~~~~~~~-----~-------~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~  157 (176)
                         .+.........     +       ....|+.++|+|||.+|++-+.||.+||||..+.+.+..+....+...|++|+
T Consensus       262 ~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWS  341 (636)
T KOG2394|consen  262 ALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWS  341 (636)
T ss_pred             ccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEc
Confidence               11111100000     0       11357889999999999999999999999998888888777777889999999


Q ss_pred             CCCCEEEEccCCCcEEEe
Q psy15417        158 EDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       158 ~~~~~l~tg~~d~~v~vw  175 (176)
                      |||+||++|+.|.-|.||
T Consensus       342 PDGKyIvtGGEDDLVtVw  359 (636)
T KOG2394|consen  342 PDGKYIVTGGEDDLVTVW  359 (636)
T ss_pred             CCccEEEecCCcceEEEE
Confidence            999999999999999999

>KOG1310|consensus

Probab=99.45  E-value=4.6e-13  Score=103.15  Aligned_cols=121  Identities=24%  Similarity=0.327  Sum_probs=98.5

Q ss_pred             eeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEE
Q psy15417         55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNV  132 (176)
Q Consensus        55 ~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v  132 (176)
                      ...+.||++.|+++.|..+|.+|++||+|..+.|||.-.-+.+..... ++...|.++.|-|.  .+++++|..|..|++
T Consensus        43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~T-gHtaNIFsvKFvP~tnnriv~sgAgDk~i~l  121 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSIST-GHTANIFSVKFVPYTNNRIVLSGAGDKLIKL  121 (758)
T ss_pred             hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeec-ccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence            457889999999999999999999999999999999864444433333 34456889999885  578999999999999


Q ss_pred             EeCCC----------ceeeeeecCCCccEEEEEEeCCC-CEEEEccCCCcEEEeC
Q psy15417        133 WDSMK----------TERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSFLRIWN  176 (176)
Q Consensus       133 ~d~~~----------~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~~d~~v~vwd  176 (176)
                      +|+.+          .++......|...|..++..|++ +.+.+++.||++|-+|
T Consensus       122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyD  176 (758)
T KOG1310|consen  122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYD  176 (758)
T ss_pred             EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeec
Confidence            99764          23444456788889889999987 7889999999999876

>KOG1587|consensus

Probab=99.44  E-value=6.3e-12  Score=99.62  Aligned_cols=158  Identities=20%  Similarity=0.254  Sum_probs=113.6

Q ss_pred             CccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCee--ee----EecCCCCCeeEEEEccCCc--EEEEeeCCCcEEEe
Q psy15417         19 HTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSC--KQ----TFPGHESDINAVTFFPNGW--AFATGSDDATCRLF   89 (176)
Q Consensus        19 h~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~--~~----~~~~h~~~v~~v~~~~~~~--~l~s~s~d~~i~iw   89 (176)
                      -...|.|+.|+| +..+++.|..+|.|.+||.+.+..  ..    ....|..+|..+.|..+..  -|++++.||.|..|
T Consensus       241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W  320 (555)
T KOG1587|consen  241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW  320 (555)
T ss_pred             cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence            457899999999 556889999999999999987654  11    2234889999999987644  49999999999999


Q ss_pred             eCCCCCe----------e--------------eEEe-------------------------------------ecceEec
Q psy15417         90 DIRADQE----------L--------------AMYS-------------------------------------HDNIICG  108 (176)
Q Consensus        90 d~~~~~~----------~--------------~~~~-------------------------------------~~~~~~~  108 (176)
                      +++.-..          .              ..+.                                     +..+..+
T Consensus       321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~  400 (555)
T KOG1587|consen  321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP  400 (555)
T ss_pred             eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence            8652100          0              0000                                     0001124


Q ss_pred             eEEEEECCCCcEEEEEcCCCeEEEEeCC-CceeeeeecCCCccEEEEEEeCCC-CEEEEccCCCcEEEeC
Q psy15417        109 ITSVAFSRSGRLLLAGYDDFNCNVWDSM-KTERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSFLRIWN  176 (176)
Q Consensus       109 v~~~~~~~~~~~l~~g~~d~~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~~d~~v~vwd  176 (176)
                      +.++.++|=+..++....|-++++|... ...++.....+...+..++|+|.. ..++++..||.+.+||
T Consensus       401 v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWD  470 (555)
T KOG1587|consen  401 VYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWD  470 (555)
T ss_pred             eEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhh
Confidence            6677777766544333348899999866 556666666677789999999975 5678888899999998

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.44  E-value=1.9e-11  Score=92.43  Aligned_cols=154  Identities=12%  Similarity=0.152  Sum_probs=100.7

Q ss_pred             cCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCeeee-------EecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeC
Q psy15417         21 GDVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQ-------TFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDI   91 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~~~-------~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~   91 (176)
                      ....++.++|+++++++++ .++.|.+||+++...+.       ... .......+.|+|++++++++.. +++|.+|++
T Consensus       126 ~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~  204 (330)
T PRK11028        126 EGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQL  204 (330)
T ss_pred             CcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEE
Confidence            3456788999998875544 56899999997632221       111 1234678999999999888876 899999998


Q ss_pred             CCC--Ce--eeEEee-cc---eEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCCce----eeeeecCCCccEEEEEEeC
Q psy15417         92 RAD--QE--LAMYSH-DN---IICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTE----RAGILAGHDNRVSCLGVTE  158 (176)
Q Consensus        92 ~~~--~~--~~~~~~-~~---~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~  158 (176)
                      ...  ..  +..... ..   .......+.++|++++++++. .++.|.+|++....    ........ .....++++|
T Consensus       205 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~-~~p~~~~~~~  283 (330)
T PRK11028        205 KDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE-TQPRGFNIDH  283 (330)
T ss_pred             eCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecc-ccCCceEECC
Confidence            632  21  111111 00   001123588999999888875 46889999875432    22222211 2335678999


Q ss_pred             CCCEEEEccC-CCcEEEeC
Q psy15417        159 DGMAVATGSW-DSFLRIWN  176 (176)
Q Consensus       159 ~~~~l~tg~~-d~~v~vwd  176 (176)
                      +|++|+++.. +++|.+|+
T Consensus       284 dg~~l~va~~~~~~v~v~~  302 (330)
T PRK11028        284 SGKYLIAAGQKSHHISVYE  302 (330)
T ss_pred             CCCEEEEEEccCCcEEEEE
Confidence            9999887665 88999983

>KOG0322|consensus

Probab=99.43  E-value=4.5e-13  Score=94.84  Aligned_cols=118  Identities=25%  Similarity=0.397  Sum_probs=96.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--Ceee--eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD--GSCK--QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~--~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      ...|+++|++++|.+....-++|+.+..+..|.++-  +.+.  .+..-..-.|+.+.+.||++.++++++|+.||+|+.
T Consensus       201 ~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVysw  280 (323)
T KOG0322|consen  201 NASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSW  280 (323)
T ss_pred             hhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEe
Confidence            456999999999998777788999888888888753  3221  111112345899999999999999999999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeC
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS  135 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~  135 (176)
                      ++.+.++...+..  ..|++++|+|+..++++++.|.+|.+|++
T Consensus       281 rtl~pLAVLkyHs--agvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  281 RTLNPLAVLKYHS--AGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             ccCCchhhhhhhh--cceeEEEeCCCCchhhhccCCceEEeeec
Confidence            9998887655433  57999999999999999999999999985

>KOG1963|consensus

Probab=99.42  E-value=2e-11  Score=98.17  Aligned_cols=113  Identities=19%  Similarity=0.186  Sum_probs=88.9

Q ss_pred             CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC--CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc
Q psy15417         61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRA--DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT  138 (176)
Q Consensus        61 h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~  138 (176)
                      |.-+.++.+++|.+.+++++..||.|.+|.--.  +....-.-..-+...|+++.|+++|.+|++|+..+-+.+|.++++
T Consensus       204 Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~  283 (792)
T KOG1963|consen  204 HTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETG  283 (792)
T ss_pred             hcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCC
Confidence            555678899999999999999999999996322  211111111223357899999999999999999999999998887


Q ss_pred             eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417        139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       139 ~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      + ..-++.-...|..+.++||+.+.+....|.+|.+
T Consensus       284 ~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~l  318 (792)
T KOG1963|consen  284 K-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHL  318 (792)
T ss_pred             C-cccccccCCeeEEEEEcCCCCeEEEEecCceEEE
Confidence            7 4445566778999999999999998888998875

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.42  E-value=3.9e-11  Score=90.68  Aligned_cols=153  Identities=13%  Similarity=0.131  Sum_probs=102.1

Q ss_pred             cCeEEEEEcCCCCEEEEEe-CCCeEEEEEcC-CCee--eeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeCCCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGA-CDASAKLWDIR-DGSC--KQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDIRADQ   95 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~-~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~~~   95 (176)
                      +....+.++|++++|++++ .++.|.+|+++ +++.  ..... .......++|+|+++.+++++. ++.+.+|++....
T Consensus        35 ~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g  113 (330)
T PRK11028         35 GQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDG  113 (330)
T ss_pred             CCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCC
Confidence            4566789999999887664 47889999997 3432  22222 2345678999999998888765 7889999986432


Q ss_pred             ee-eEEe-ecceEeceEEEEECCCCcEEE-EEcCCCeEEEEeCCCceeee-------eecCCCccEEEEEEeCCCCEEEE
Q psy15417         96 EL-AMYS-HDNIICGITSVAFSRSGRLLL-AGYDDFNCNVWDSMKTERAG-------ILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        96 ~~-~~~~-~~~~~~~v~~~~~~~~~~~l~-~g~~d~~i~v~d~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      .+ .... ... ......+.++|++++++ +...++.|.+||+.+...+.       .... ......++|+|++.++++
T Consensus       114 ~~~~~~~~~~~-~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv  191 (330)
T PRK11028        114 IPVAPIQIIEG-LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYC  191 (330)
T ss_pred             CCCCceeeccC-CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECCCCCEEEE
Confidence            11 1111 111 12345688999998775 45566899999986532221       1111 223467899999999877


Q ss_pred             ccC-CCcEEEeC
Q psy15417        166 GSW-DSFLRIWN  176 (176)
Q Consensus       166 g~~-d~~v~vwd  176 (176)
                      +.. +++|.+||
T Consensus       192 ~~~~~~~v~v~~  203 (330)
T PRK11028        192 VNELNSSVDVWQ  203 (330)
T ss_pred             EecCCCEEEEEE
Confidence            765 88999885

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.41  E-value=1.1e-11  Score=96.83  Aligned_cols=144  Identities=11%  Similarity=0.161  Sum_probs=97.9

Q ss_pred             eEEEEEcCCCCEEEEEe-CCCeEEEE--EcCCCeeeeEecCCCCCeeEEEEccCCcEEEEe-eCCCcEEEeeCCCCCe-e
Q psy15417         23 VMSLSLAPDMRTFVSGA-CDASAKLW--DIRDGSCKQTFPGHESDINAVTFFPNGWAFATG-SDDATCRLFDIRADQE-L   97 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s-~dg~v~~w--d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~~~~~-~   97 (176)
                      ....+|+||++.|+.++ .+|.+.||  |+.+++ ...+..+...+.+..|+|+|+.++.+ ..++...+|++..... .
T Consensus       250 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~  328 (429)
T PRK01742        250 NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA  328 (429)
T ss_pred             cCceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe
Confidence            34689999999887664 67876655  666655 44566677778899999999876544 4678888887643221 1


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ......    . ....|+|+++.++..+.++ +.+||+.+++........  ....++|+|+|.+|+.++.++.+++|
T Consensus       329 ~~l~~~----~-~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l  398 (429)
T PRK01742        329 SLVGGR----G-YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVL  398 (429)
T ss_pred             EEecCC----C-CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEE
Confidence            221111    1 2467999999988877665 556898776543322222  22456799999999999989888776

>KOG0974|consensus

Probab=99.40  E-value=2.3e-12  Score=105.08  Aligned_cols=118  Identities=28%  Similarity=0.447  Sum_probs=99.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.||++.|..+.++.||.++++.|.|+++++|++++.+... +.-+|++.|..++|+|+  .+++++.|-+.++|+...
T Consensus       170 ~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~  247 (967)
T KOG0974|consen  170 RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNG  247 (967)
T ss_pred             eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEeccc
Confidence            478999999999999999999999999999999999987655 77889999999999998  999999999999996543


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                       .++..+. .+....+-.++.+++....++++.|+.+++|++.
T Consensus       248 -~~l~~y~-~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~  288 (967)
T KOG0974|consen  248 -TQLEVYD-EHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN  288 (967)
T ss_pred             -ceehhhh-hhhhcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence             2333321 1223457788999888999999999999999953

>KOG1240|consensus

Probab=99.39  E-value=2.1e-11  Score=101.31  Aligned_cols=161  Identities=21%  Similarity=0.305  Sum_probs=113.2

Q ss_pred             cCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCC-------eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEE
Q psy15417         16 ASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCR   87 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~   87 (176)
                      +..|+..|..++.+++. .+|+|||.||+||+||.++-       ++..++.--..++..+.+.+.+..++.++.||.|.
T Consensus      1044 L~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~ 1123 (1431)
T KOG1240|consen 1044 LHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVR 1123 (1431)
T ss_pred             hhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEE
Confidence            45688888898887765 89999999999999998642       23334433457789999999999999999999999


Q ss_pred             EeeCCCCC--e-e----eEEeecceEeceEEEEECC-CC-cEEEEEcCCCeEEEEeCCCceeeeee--cCCCccEEEEEE
Q psy15417         88 LFDIRADQ--E-L----AMYSHDNIICGITSVAFSR-SG-RLLLAGYDDFNCNVWDSMKTERAGIL--AGHDNRVSCLGV  156 (176)
Q Consensus        88 iwd~~~~~--~-~----~~~~~~~~~~~v~~~~~~~-~~-~~l~~g~~d~~i~v~d~~~~~~~~~~--~~~~~~i~~~~~  156 (176)
                      +..+.--.  . .    ..........-+..-+|.. .+ ..++.+...+.|..||..........  ....+.|++++.
T Consensus      1124 ~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~i 1203 (1431)
T KOG1240|consen 1124 VLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVI 1203 (1431)
T ss_pred             EEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEe
Confidence            98875411  0 0    0000111111122222222 12 36777888889999997655433322  233467999999


Q ss_pred             eCCCCEEEEccCCCcEEEeC
Q psy15417        157 TEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       157 ~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +|.+..+++|..-|.+.+||
T Consensus      1204 dp~~~WlviGts~G~l~lWD 1223 (1431)
T KOG1240|consen 1204 DPWCNWLVIGTSRGQLVLWD 1223 (1431)
T ss_pred             cCCceEEEEecCCceEEEEE
Confidence            99999999999999999998

>KOG4547|consensus

Probab=99.39  E-value=4e-11  Score=92.85  Aligned_cols=142  Identities=18%  Similarity=0.225  Sum_probs=118.2

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEe
Q psy15417         30 PDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIIC  107 (176)
Q Consensus        30 ~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~  107 (176)
                      .|..+++-|...|.|.+|+...++....+.  .|.++|+++.++.+...|.|++.|..+..|+.+.......+.-..  .
T Consensus        68 ~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~--~  145 (541)
T KOG4547|consen   68 LDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQK--P  145 (541)
T ss_pred             CCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCC--C
Confidence            345688999999999999999999888776  489999999999998899999999999999998887777665433  3


Q ss_pred             ceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC-----CCEEEEc-cCCCcEEEe
Q psy15417        108 GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED-----GMAVATG-SWDSFLRIW  175 (176)
Q Consensus       108 ~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~l~tg-~~d~~v~vw  175 (176)
                      .+.++.++||+.++++++  ++|++||+++.+.+..+.+|...|++++|..+     |.++.++ ..+.-+.+|
T Consensus       146 ~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w  217 (541)
T KOG4547|consen  146 LVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVW  217 (541)
T ss_pred             ccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEE
Confidence            467899999999998875  57999999999999999999999999999876     6666544 334444444

>KOG2111|consensus

Probab=99.39  E-value=5.7e-11  Score=86.16  Aligned_cols=98  Identities=21%  Similarity=0.233  Sum_probs=85.0

Q ss_pred             CCCeEEEEEcCCCee--eeEecCCCCCeeEEEEccCCcEEEEeeCCCc-EEEeeCCCCCeeeEEeecceEeceEEEEECC
Q psy15417         40 CDASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGSDDAT-CRLFDIRADQELAMYSHDNIICGITSVAFSR  116 (176)
Q Consensus        40 ~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~  116 (176)
                      .-|.|++-|+...+.  ...+++|.+.+.+++...+|..++|+|.-|+ |||||..++..+.++...-....+.+++|+|
T Consensus       157 k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp  236 (346)
T KOG2111|consen  157 KTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSP  236 (346)
T ss_pred             ccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCC
Confidence            358899999987655  4688999999999999999999999999998 8999999998887765444445789999999


Q ss_pred             CCcEEEEEcCCCeEEEEeCCC
Q psy15417        117 SGRLLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus       117 ~~~~l~~g~~d~~i~v~d~~~  137 (176)
                      +..+|++.+..|+++|+.++.
T Consensus       237 ~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  237 NSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             CccEEEEEcCCCeEEEEEeec
Confidence            999999999999999998654

>KOG1272|consensus

Probab=99.39  E-value=9.3e-13  Score=99.52  Aligned_cols=150  Identities=17%  Similarity=0.220  Sum_probs=121.0

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      ..|..+.|-|-.-+|++++..|.++.-|+.+|+.+..+..-.+.+..++-.|-...+-.|...|+|.+|...+.+.+.. 
T Consensus       210 ~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvK-  288 (545)
T KOG1272|consen  210 IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVK-  288 (545)
T ss_pred             CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHH-
Confidence            5678899999999999999999999999999999888887778888888888888888999999999999876665543 


Q ss_pred             eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                       ..++..+|.+++++++|.++++.+.|..++|||+.....+.+... .-....+++|..| .| ..|....|.||
T Consensus       289 -iLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg-lL-A~~~G~~v~iw  359 (545)
T KOG1272|consen  289 -ILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG-LL-ALSYGDHVQIW  359 (545)
T ss_pred             -HHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCcccccccccc-ce-eeecCCeeeee
Confidence             233446789999999999999999999999999987765555443 2345667888654 33 44455588888

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.38  E-value=9.9e-11  Score=91.74  Aligned_cols=156  Identities=13%  Similarity=0.092  Sum_probs=104.7

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCCc--EEEe
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGAC---DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDAT--CRLF   89 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~---dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~--i~iw   89 (176)
                      ++.|.+.+...+|+|||+.|+..+.   +..|.+||+.+++.. .+..+.+.+....|+|+|+.+ ++.+.++.  |.+|
T Consensus       197 lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~  275 (435)
T PRK05137        197 LTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTM  275 (435)
T ss_pred             EecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEE
Confidence            5668889999999999998877654   467999999888643 455566677889999999876 46666665  6666


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCC--eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDF--NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      |+.+++.........   ......|+||++.++..+ .++  .|+++|+..++.. .+..+...+....|+|+|..|+..
T Consensus       276 d~~~~~~~~Lt~~~~---~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~~~~~~~~~~~SpdG~~ia~~  351 (435)
T PRK05137        276 DLRSGTTTRLTDSPA---IDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISFGGGRYSTPVWSPRGDLIAFT  351 (435)
T ss_pred             ECCCCceEEccCCCC---ccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-EeecCCCcccCeEECCCCCEEEEE
Confidence            887665433222211   234578999998776654 333  6788887654432 232233445567899999998766


Q ss_pred             cCC---CcEEEeC
Q psy15417        167 SWD---SFLRIWN  176 (176)
Q Consensus       167 ~~d---~~v~vwd  176 (176)
                      +.+   ..+.+||
T Consensus       352 ~~~~~~~~i~~~d  364 (435)
T PRK05137        352 KQGGGQFSIGVMK  364 (435)
T ss_pred             EcCCCceEEEEEE
Confidence            543   2455543

>KOG1963|consensus

Probab=99.37  E-value=4.3e-11  Score=96.24  Aligned_cols=157  Identities=12%  Similarity=0.234  Sum_probs=119.0

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--Ce--eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD--GS--CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~--~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .-|.-.+.|.++||+++++++|..||.|.+|.--.  .+  ....+.=|..+|+++.|+++|.+|+||++.+-+-+|.+.
T Consensus       202 ~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~  281 (792)
T KOG1963|consen  202 VHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLE  281 (792)
T ss_pred             hhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeec
Confidence            34777789999999999999999999999996422  11  233455588899999999999999999999999999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec---C--------CCccEEEEEEeCCCC
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA---G--------HDNRVSCLGVTEDGM  161 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~---~--------~~~~i~~~~~~~~~~  161 (176)
                      +++.. ..+...  .+|..+.++||+.+++...+|..|++-....-+...++.   .        ...-.+.+++.|..+
T Consensus       282 T~~kq-fLPRLg--s~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~  358 (792)
T KOG1963|consen  282 TGKKQ-FLPRLG--SPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTN  358 (792)
T ss_pred             CCCcc-cccccC--CeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCC
Confidence            87733 223322  467889999999999999999999988743322222211   1        123356678888777


Q ss_pred             EEEEccCCCcEEEeC
Q psy15417        162 AVATGSWDSFLRIWN  176 (176)
Q Consensus       162 ~l~tg~~d~~v~vwd  176 (176)
                      .++-.+..++|.+||
T Consensus       359 ~~vln~~~g~vQ~yd  373 (792)
T KOG1963|consen  359 SLVLNGHPGHVQFYD  373 (792)
T ss_pred             ceeecCCCceEEEEe
Confidence            788888999999886

>KOG4227|consensus

Probab=99.36  E-value=5.9e-12  Score=93.82  Aligned_cols=121  Identities=18%  Similarity=0.254  Sum_probs=101.7

Q ss_pred             eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC------CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC
Q psy15417         54 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR------ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD  127 (176)
Q Consensus        54 ~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d  127 (176)
                      +.+.+.+|.+.|+++.|+.++..|++|+.|..+++|++.      .++++.+.++. +...|.+++|....+.+++|..+
T Consensus        48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~-H~SNIF~L~F~~~N~~~~SG~~~  126 (609)
T KOG4227|consen   48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHP-HRSNIFSLEFDLENRFLYSGERW  126 (609)
T ss_pred             hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCc-cccceEEEEEccCCeeEecCCCc
Confidence            566778999999999999999999999999999999974      23444443333 23568999999999999999999


Q ss_pred             CeEEEEeCCCceeeeeecCCCc---cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        128 FNCNVWDSMKTERAGILAGHDN---RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       128 ~~i~v~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++...|+++.+.+.... |++   .|..+..+|-.+.+++.+.++.|.+||
T Consensus       127 ~~VI~HDiEt~qsi~V~~-~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D  177 (609)
T KOG4227|consen  127 GTVIKHDIETKQSIYVAN-ENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFID  177 (609)
T ss_pred             ceeEeeecccceeeeeec-ccCcccceeecccCCCCceEEEEecCceEEEEe
Confidence            999999999887776654 433   799999999999999999999999997

>KOG4190|consensus

Probab=99.36  E-value=2.5e-12  Score=99.67  Aligned_cols=160  Identities=20%  Similarity=0.358  Sum_probs=116.8

Q ss_pred             cccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-------CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417         14 PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-------GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      ..++||.+.|..+.--.+...+++++.|++||+|.++.       ..|..+++.|+.+|.++.|..+-++++++  |+.|
T Consensus       729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~gi  806 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGI  806 (1034)
T ss_pred             ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcc
Confidence            35789999999988777888899999999999998853       35889999999999999999988877654  7899


Q ss_pred             EEeeCCCCCeeeEEe--ec-ceEeceEEEEECCCCcEEEEE-cCCCeEEEEeCCCceeeeee-----cCCCccEEEEEEe
Q psy15417         87 RLFDIRADQELAMYS--HD-NIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSMKTERAGIL-----AGHDNRVSCLGVT  157 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~~g-~~d~~i~v~d~~~~~~~~~~-----~~~~~~i~~~~~~  157 (176)
                      .+||.--+..+....  .. .....|.++. +-+..++++| +...+++++|.+..+-....     ++.+.-+.++++.
T Consensus       807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa  885 (1034)
T KOG4190|consen  807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVA  885 (1034)
T ss_pred             eeecccccchhHhhhcCcccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEec
Confidence            999965444333111  11 1111222322 1134455554 88899999998776544333     3455678999999


Q ss_pred             CCCCEEEEccCCCcEEEeC
Q psy15417        158 EDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       158 ~~~~~l~tg~~d~~v~vwd  176 (176)
                      |.|+.+|.+=.+|++.+-|
T Consensus       886 ~~GN~lAa~LSnGci~~LD  904 (1034)
T KOG4190|consen  886 DKGNKLAAALSNGCIAILD  904 (1034)
T ss_pred             cCcchhhHHhcCCcEEEEe
Confidence            9999999998888887643

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.34  E-value=1.8e-10  Score=90.22  Aligned_cols=156  Identities=15%  Similarity=0.114  Sum_probs=101.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCC--cEEEe
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACD---ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDA--TCRLF   89 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~d---g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~--~i~iw   89 (176)
                      ++.|.+.+....|+||++.++..+.+   ..+.+||+.+++.. .+....+...+..|+|+|+.+ ++.+.++  .|.+|
T Consensus       199 lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~  277 (433)
T PRK04922        199 ILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVM  277 (433)
T ss_pred             eecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCCCEEEEEEeCCCCceEEEE
Confidence            45677788999999999988877643   46899999887643 333344445678999999866 4556665  48889


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCCe--EEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFN--CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      |+.+++........   .......|+|+++.++..+ .++.  +.++++..++... +..+.......+|+|+|.+|+..
T Consensus       278 d~~~g~~~~lt~~~---~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~  353 (433)
T PRK04922        278 DLGSRQLTRLTNHF---GIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARASVSPDGKKIAMV  353 (433)
T ss_pred             ECCCCCeEECccCC---CCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEEECCCCCEEEEE
Confidence            98776543322221   1234578999998776654 3444  6666765554322 21222334467899999998765


Q ss_pred             cCCC---cEEEeC
Q psy15417        167 SWDS---FLRIWN  176 (176)
Q Consensus       167 ~~d~---~v~vwd  176 (176)
                      +.++   .|.+||
T Consensus       354 ~~~~~~~~I~v~d  366 (433)
T PRK04922        354 HGSGGQYRIAVMD  366 (433)
T ss_pred             ECCCCceeEEEEE
Confidence            4332   477764

>KOG2139|consensus

Probab=99.34  E-value=2.4e-10  Score=84.39  Aligned_cols=142  Identities=17%  Similarity=0.264  Sum_probs=100.9

Q ss_pred             CCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCC----ee----------eeEecCCCCCeeEEEEccCCcEEEEeeC
Q psy15417         18 GHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDG----SC----------KQTFPGHESDINAVTFFPNGWAFATGSD   82 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~----~~----------~~~~~~h~~~v~~v~~~~~~~~l~s~s~   82 (176)
                      --...|.|++|-|.+. .|+.|+ -+-|.+|.....    +.          +-..++| -+|++++|.+||..+++++-
T Consensus       138 ~sQrnvtclawRPlsaselavgC-r~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~  215 (445)
T KOG2139|consen  138 VSQRNVTCLAWRPLSASELAVGC-RAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASF  215 (445)
T ss_pred             hhhcceeEEEeccCCcceeeeee-cceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeeccc
Confidence            3456799999999655 555555 455999986421    11          1122344 67999999999999999987


Q ss_pred             C-CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCCC
Q psy15417         83 D-ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus        83 d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~  160 (176)
                      + ..|.+||..+++.+......  ..+++-+.|+||+.+++++.-|+..++|+... ...+.-.. -.+.|....|+|.|
T Consensus       216 gsssi~iWdpdtg~~~pL~~~g--lgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcG  292 (445)
T KOG2139|consen  216 GSSSIMIWDPDTGQKIPLIPKG--LGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCG  292 (445)
T ss_pred             CcceEEEEcCCCCCcccccccC--CCceeeEEEcCCCCEEEEecccceeeeehhcccceecceec-cCCceeeeeecCCC
Confidence            5 57999999887665443222  24677899999999999999999999996332 22222222 23488899999999


Q ss_pred             CEEE
Q psy15417        161 MAVA  164 (176)
Q Consensus       161 ~~l~  164 (176)
                      .+|.
T Consensus       293 sfLL  296 (445)
T KOG2139|consen  293 SFLL  296 (445)
T ss_pred             CEEE
Confidence            8764

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.32  E-value=4.6e-10  Score=87.84  Aligned_cols=156  Identities=13%  Similarity=0.095  Sum_probs=98.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEe-eCCC--cEEEe
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGAC---DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATG-SDDA--TCRLF   89 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~---dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-s~d~--~i~iw   89 (176)
                      ++.+.+.+...+|+|||+.|+..+.   +..+.+||+.+++... +......+....|+|+|+.++.. +.++  .|.+|
T Consensus       194 lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~  272 (429)
T PRK03629        194 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM  272 (429)
T ss_pred             eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEE
Confidence            3446678899999999998876542   3468899998875332 22223335568999999877654 4455  48888


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcC-CCe--EEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD-DFN--CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      |+.+++........   ..+....|+|+++.++..+. ++.  +.++|+..++.. .+..+........|+|+|.+|+..
T Consensus       273 d~~tg~~~~lt~~~---~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~SpDG~~Ia~~  348 (429)
T PRK03629        273 DLASGQIRQVTDGR---SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMV  348 (429)
T ss_pred             ECCCCCEEEccCCC---CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEEEEE
Confidence            98776543332221   23456889999997766554 344  444566554332 222233344567899999998765


Q ss_pred             cCC-C--cEEEeC
Q psy15417        167 SWD-S--FLRIWN  176 (176)
Q Consensus       167 ~~d-~--~v~vwd  176 (176)
                      +.+ +  .+.+||
T Consensus       349 ~~~~g~~~I~~~d  361 (429)
T PRK03629        349 SSNGGQQHIAKQD  361 (429)
T ss_pred             EccCCCceEEEEE
Confidence            543 2  355553

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.31  E-value=1.9e-10  Score=89.93  Aligned_cols=156  Identities=14%  Similarity=0.134  Sum_probs=98.3

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEeeC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACD---ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDI   91 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~d---g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~   91 (176)
                      +..+.+.+.+.+|+||++.++..+.+   ..+.+||+++++... +....+.+....|+|+|+.++ +.+.++...+|.+
T Consensus       191 l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~  269 (427)
T PRK02889        191 ALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTV  269 (427)
T ss_pred             eccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEE
Confidence            34577889999999999988776643   358999999886543 333345567889999998765 6677887777754


Q ss_pred             --CCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCCeEEEEe--CCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         92 --RADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWD--SMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        92 --~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                        .++.........   .......|+|||+.++..+ .++...+|.  ...++.... ..........+|+|+|++|+..
T Consensus       270 d~~~~~~~~lt~~~---~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l-t~~g~~~~~~~~SpDG~~Ia~~  345 (427)
T PRK02889        270 NADGSGLRRLTQSS---GIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV-TFTGSYNTSPRISPDGKLLAYI  345 (427)
T ss_pred             ECCCCCcEECCCCC---CCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE-ecCCCCcCceEECCCCCEEEEE
Confidence              333322111111   1234567999998776544 345555654  333332221 1122223456899999999876


Q ss_pred             cCCC---cEEEeC
Q psy15417        167 SWDS---FLRIWN  176 (176)
Q Consensus       167 ~~d~---~v~vwd  176 (176)
                      +.++   .|.+||
T Consensus       346 s~~~g~~~I~v~d  358 (427)
T PRK02889        346 SRVGGAFKLYVQD  358 (427)
T ss_pred             EccCCcEEEEEEE
Confidence            6543   577775

>KOG1587|consensus

Probab=99.30  E-value=8.7e-11  Score=93.22  Aligned_cols=154  Identities=20%  Similarity=0.167  Sum_probs=113.1

Q ss_pred             cCeEEEEEcC-CCCEEEEEeCCCeEEEEEcC---CC-----eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         21 GDVMSLSLAP-DMRTFVSGACDASAKLWDIR---DG-----SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        21 ~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~---~~-----~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      ..+++++|.+ +...|+.|+..|.|.-=+..   ..     +.+..+..|.++|+++.++|=...++..+.|-+++||.-
T Consensus       348 ~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~  427 (555)
T KOG1587|consen  348 VGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSE  427 (555)
T ss_pred             cceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccc
Confidence            4678999987 56789999999998752222   21     123355668899999999998776666666999999986


Q ss_pred             C-CCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCc--eeeeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417         92 R-ADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKT--ERAGILAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        92 ~-~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      . ...++  +.+......+..++|+|..+ +|+++..+|.+.+||+...  ++......+......+.++++|..|+.|.
T Consensus       428 ~~~~~Pl--~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd  505 (555)
T KOG1587|consen  428 DVIASPL--LSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGD  505 (555)
T ss_pred             cCCCCcc--hhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEec
Confidence            5 22222  22333333588999999875 6788888999999997653  45555544555567778888899999999


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      ..|++++|+
T Consensus       506 ~~G~~~~~~  514 (555)
T KOG1587|consen  506 ANGTTHILK  514 (555)
T ss_pred             CCCcEEEEE
Confidence            999999874

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.30  E-value=5.2e-10  Score=87.03  Aligned_cols=156  Identities=15%  Similarity=0.135  Sum_probs=102.8

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCC--cEEEe
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACD---ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDA--TCRLF   89 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~d---g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~--~i~iw   89 (176)
                      +..+...+....|+||++.++..+..   ..|.+||+.+++... +..+...+.+++|+|+++.|+ +.+.++  .|.+|
T Consensus       185 l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~  263 (417)
T TIGR02800       185 ITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVM  263 (417)
T ss_pred             eecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEE
Confidence            34466678899999999988877654   479999999876433 334555677789999998665 445444  48888


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcC-CC--eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD-DF--NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      |+.+++.........   ......|+|+++.++..+. ++  .+.++|+..++.. .+..+.......+|+|++.+|+.+
T Consensus       264 d~~~~~~~~l~~~~~---~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i~~~  339 (417)
T TIGR02800       264 DLDGKQLTRLTNGPG---IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLIAFV  339 (417)
T ss_pred             ECCCCCEEECCCCCC---CCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEEEEE
Confidence            887664432222211   1234579999987765443 33  5777787655432 333344456677899999998877


Q ss_pred             cCCC---cEEEeC
Q psy15417        167 SWDS---FLRIWN  176 (176)
Q Consensus       167 ~~d~---~v~vwd  176 (176)
                      +.++   .|.+||
T Consensus       340 ~~~~~~~~i~~~d  352 (417)
T TIGR02800       340 HREGGGFNIAVMD  352 (417)
T ss_pred             EccCCceEEEEEe
Confidence            7665   555553

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2139|consensus

Probab=99.29  E-value=1.7e-10  Score=85.24  Aligned_cols=154  Identities=14%  Similarity=0.269  Sum_probs=114.1

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC-CCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC----
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ----   95 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~----   95 (176)
                      -.+..++|++---.++++..|-.|++||-.+ ++...++.. ...|.+++|.|.+..-++.+-.+.|.+|.....-    
T Consensus        99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~r  177 (445)
T KOG2139|consen   99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANR  177 (445)
T ss_pred             cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCccccccc
Confidence            3456788888556788999999999999876 556666643 4679999999975544555555679999753211    


Q ss_pred             --------eeeEEeecceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         96 --------ELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        96 --------~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                              ....+...++ .+|+++.|++||..+++++ .+..|.|||...+..+-....-.+.++-+.|+|++.+|..+
T Consensus       178 ~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaA  256 (445)
T KOG2139|consen  178 NIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAA  256 (445)
T ss_pred             ccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEe
Confidence                    1122333333 5789999999999888865 56679999988776555444455678889999999999999


Q ss_pred             cCCCcEEEeC
Q psy15417        167 SWDSFLRIWN  176 (176)
Q Consensus       167 ~~d~~v~vwd  176 (176)
                      .-|+..++|+
T Consensus       257 t~davfrlw~  266 (445)
T KOG2139|consen  257 TCDAVFRLWQ  266 (445)
T ss_pred             cccceeeeeh
Confidence            9999999993

>KOG0290|consensus

Probab=99.26  E-value=1.4e-10  Score=83.51  Aligned_cols=152  Identities=15%  Similarity=0.181  Sum_probs=110.3

Q ss_pred             cCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEe---cCCCCCeeEEEEccC-CcEEEEeeCCC-cEEEe
Q psy15417         16 ASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTF---PGHESDINAVTFFPN-GWAFATGSDDA-TCRLF   89 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~---~~h~~~v~~v~~~~~-~~~l~s~s~d~-~i~iw   89 (176)
                      +..|..+|..++|..++ ++|++.+.||.|+++|++.-+....+   +....+..-++|.+. .+++++-..|. .|.+-
T Consensus       192 LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iL  271 (364)
T KOG0290|consen  192 LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVIL  271 (364)
T ss_pred             EEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEE
Confidence            67899999999999865 58999999999999999876533222   222457778888874 56777777765 58889


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCce------eeeeecCCCccEEEEEEeC-CCC
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTE------RAGILAGHDNRVSCLGVTE-DGM  161 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~------~~~~~~~~~~~i~~~~~~~-~~~  161 (176)
                      |+|-+... .-....+...|+.++|.|.. ..+.+++.|.+..+||+..-.      ++.... -...|+.+.|++ .+.
T Consensus       272 DiR~P~tp-va~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~D  349 (364)
T KOG0290|consen  272 DIRVPCTP-VARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPD  349 (364)
T ss_pred             EecCCCcc-eehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCC
Confidence            99865432 22344555689999999974 688999999999999975421      111222 345788999985 467


Q ss_pred             EEEEccCC
Q psy15417        162 AVATGSWD  169 (176)
Q Consensus       162 ~l~tg~~d  169 (176)
                      .|+.+...
T Consensus       350 wiai~~~k  357 (364)
T KOG0290|consen  350 WIAICFGK  357 (364)
T ss_pred             EEEEEecC
Confidence            78777543

>KOG2321|consensus

Probab=99.25  E-value=2e-10  Score=89.14  Aligned_cols=150  Identities=13%  Similarity=0.216  Sum_probs=113.0

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec-
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD-  103 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-  103 (176)
                      .++++....-|+.++....|.=+++..|+.+..|....+++++|...+-..+|++|+.+|.+..||.+..+.+...... 
T Consensus       138 Dm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~  217 (703)
T KOG2321|consen  138 DMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAAS  217 (703)
T ss_pred             cccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeeccc
Confidence            4556544443444444556888899999999999888899999999999889999999999999999876554333221 


Q ss_pred             --------ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc--cEEEEEEeCC--CCEEEEccCCCc
Q psy15417        104 --------NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN--RVSCLGVTED--GMAVATGSWDSF  171 (176)
Q Consensus       104 --------~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~--~i~~~~~~~~--~~~l~tg~~d~~  171 (176)
                              .....|+++.|+.+|-.+++|+.+|.+.|||+...+++... .|..  +|..+.|.+.  ++.+++. +...
T Consensus       218 ~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k-dh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~  295 (703)
T KOG2321|consen  218 SVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK-DHGYELPIKKLDWQDTDQQNKVVSM-DKRI  295 (703)
T ss_pred             ccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec-ccCCccceeeecccccCCCceEEec-chHH
Confidence                    11234889999988999999999999999999887766544 3433  6888888665  4556555 5567


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      ++|||
T Consensus       296 ~kiWd  300 (703)
T KOG2321|consen  296 LKIWD  300 (703)
T ss_pred             hhhcc
Confidence            89996

>KOG3881|consensus

Probab=99.22  E-value=3e-10  Score=84.41  Aligned_cols=120  Identities=18%  Similarity=0.162  Sum_probs=100.0

Q ss_pred             CeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         22 DVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        22 ~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      .++.+.|-++  ...|++++.-+.|++||.+.++ .+.+|.-.+.+++++...|+++.++++..-+.+..+|++......
T Consensus       204 W~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g  283 (412)
T KOG3881|consen  204 WITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLG  283 (412)
T ss_pred             eeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeec
Confidence            3457888887  7899999999999999998764 556666667889999999999999999999999999999876654


Q ss_pred             EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee
Q psy15417         99 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG  142 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~  142 (176)
                      . .+......+.++..||.++++++++.|+.+||+|+++.+.+.
T Consensus       284 ~-~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~  326 (412)
T KOG3881|consen  284 C-GLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLH  326 (412)
T ss_pred             c-ccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhh
Confidence            3 233444578899999999999999999999999988855443

>KOG1334|consensus

Probab=99.18  E-value=1.4e-10  Score=88.35  Aligned_cols=162  Identities=20%  Similarity=0.253  Sum_probs=120.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe-cCCCCCeeEEEEccC--CcEEEEeeCCCcEEEeeC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF-PGHESDINAVTFFPN--GWAFATGSDDATCRLFDI   91 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd~   91 (176)
                      .|.+|.+.|+.+.|...|..|++||.|..|.+||..+++.+-.| .+|...|--..|.|.  ...+++++.||.+++=.+
T Consensus       137 kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i  216 (559)
T KOG1334|consen  137 KLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEI  216 (559)
T ss_pred             cccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeee
Confidence            46789999999999999999999999999999999988765555 468888888889885  568999999999998665


Q ss_pred             CC-CCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeee---cCCCc---cEEEEEEeCCCC-E
Q psy15417         92 RA-DQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGIL---AGHDN---RVSCLGVTEDGM-A  162 (176)
Q Consensus        92 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~---~~~~~---~i~~~~~~~~~~-~  162 (176)
                      .. +..........+..++..++.-|+. ..|.+++.|+.+.-+|+....+...+   ..+..   ....++..|... .
T Consensus       217 ~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~  296 (559)
T KOG1334|consen  217 LETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNE  296 (559)
T ss_pred             ccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccc
Confidence            32 2221111122233457777777765 46888999999998987655433222   22333   457788888654 7


Q ss_pred             EEEccCCCcEEEeC
Q psy15417        163 VATGSWDSFLRIWN  176 (176)
Q Consensus       163 l~tg~~d~~v~vwd  176 (176)
                      +++|+.|..+|+||
T Consensus       297 faVgG~dqf~RvYD  310 (559)
T KOG1334|consen  297 FAVGGSDQFARVYD  310 (559)
T ss_pred             cccCChhhhhhhhc
Confidence            89999999999986

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.18  E-value=5.5e-09  Score=81.80  Aligned_cols=145  Identities=13%  Similarity=0.159  Sum_probs=92.9

Q ss_pred             cCeEEEEEcCCCCEEEEE-eCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEe--eCCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSG-ACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLF--DIRAD   94 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~-s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iw--d~~~~   94 (176)
                      +.+....|+|||+.|+.. +.+|  .|.+||+++++... +..+...+....|+|+++.++..+. ++...+|  |+.++
T Consensus       243 ~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g  321 (429)
T PRK03629        243 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGG  321 (429)
T ss_pred             CCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCC
Confidence            334568999999977654 4444  48889998887544 4444556788999999998766655 4555555  55554


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcC-C--CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYD-D--FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d--~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      +.... ....  .......|+|+|+.++.... +  ..+.+||+..++........  ......|+|||.+|+..+.++.
T Consensus       322 ~~~~l-t~~~--~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~~--~~~~p~~SpDG~~i~~~s~~~~  396 (429)
T PRK03629        322 APQRI-TWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDTF--LDETPSIAPNGTMVIYSSSQGM  396 (429)
T ss_pred             CeEEe-ecCC--CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCCC--CCCCceECCCCCEEEEEEcCCC
Confidence            33222 1111  12345789999988766443 2  35788998766533222111  2235679999999988887764

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.14  E-value=8.3e-09  Score=80.92  Aligned_cols=144  Identities=13%  Similarity=0.053  Sum_probs=92.0

Q ss_pred             CccCeEEEEEcCCCCEEE-EEeCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-CCCc--EEEeeCC
Q psy15417         19 HTGDVMSLSLAPDMRTFV-SGACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-DDAT--CRLFDIR   92 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~-s~s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~--i~iwd~~   92 (176)
                      +.+...+..|+||++.++ +.+.+|  .|.+||+.+++.. .+..+.......+|+|+++.++..+ .++.  +.++|+.
T Consensus       246 ~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~  324 (433)
T PRK04922        246 FRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAAS  324 (433)
T ss_pred             CCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence            344555789999998664 555555  5889999888743 4555555566789999998877665 4455  5555665


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC---eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF---NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~---~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      +++..... ...  .......|+|+++.++....++   .|.+||+..++.. .+. +........|+|+|.+|+..+.
T Consensus       325 ~g~~~~lt-~~g--~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~  398 (433)
T PRK04922        325 GGSAERLT-FQG--NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATR  398 (433)
T ss_pred             CCCeEEee-cCC--CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEe
Confidence            55432221 111  1123578999999887654332   6899998766543 222 2223345689999998776554

>KOG0280|consensus

Probab=99.12  E-value=5.5e-09  Score=75.38  Aligned_cols=114  Identities=18%  Similarity=0.153  Sum_probs=88.8

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee--EecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      ..+++|++.+..++++-.+|.+.+-+........  +++.|+.+..-+.|+. +.+.+++||+|+.+..||+|.+.....
T Consensus       124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~  203 (339)
T KOG0280|consen  124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW  203 (339)
T ss_pred             eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence            4578899989999999999999866665554444  8899999999899975 467999999999999999995543322


Q ss_pred             EeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCC
Q psy15417        100 YSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~  136 (176)
                      ...+-+..+|.+|.-+|. ..++++|+.|..|++||.+
T Consensus       204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR  241 (339)
T KOG0280|consen  204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTR  241 (339)
T ss_pred             ecceeeecceEEEecCCCCCceEEEeccccceeeeehh
Confidence            223334467878876664 5689999999999999965

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.12  E-value=1.7e-08  Score=79.01  Aligned_cols=148  Identities=15%  Similarity=0.101  Sum_probs=93.6

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCC--cEEEe
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACD---ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDA--TCRLF   89 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~d---g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~--~i~iw   89 (176)
                      +..+...+....|+|||+.|+..+.+   ..+.+||+.+++... +....+.+....|+|+|+.++ +.+.++  .|.++
T Consensus       194 l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~  272 (430)
T PRK00178        194 LLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVM  272 (430)
T ss_pred             EecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEE
Confidence            44567788999999999988766543   358889998886433 333334455789999998765 555555  47777


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCC--eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDF--NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      |+.+++.........   ......|+|++..++..+ .++  .++++++..++...... ........+|+|+++.|+..
T Consensus       273 d~~~~~~~~lt~~~~---~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~-~~~~~~~~~~Spdg~~i~~~  348 (430)
T PRK00178        273 DLASRQLSRVTNHPA---IDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF-VGNYNARPRLSADGKTLVMV  348 (430)
T ss_pred             ECCCCCeEEcccCCC---CcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-CCCCccceEECCCCCEEEEE
Confidence            887765433222211   233467999998665544 333  57777876655332211 11223346799999998765


Q ss_pred             cC
Q psy15417        167 SW  168 (176)
Q Consensus       167 ~~  168 (176)
                      +.
T Consensus       349 ~~  350 (430)
T PRK00178        349 HR  350 (430)
T ss_pred             Ec
Confidence            54

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.12  E-value=2.8e-10  Score=58.61  Aligned_cols=39  Identities=46%  Similarity=0.877  Sum_probs=36.9

Q ss_pred             CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         52 GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        52 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      ++++.++++|..+|++++|+|++..|++++.|++|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            367889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.12  E-value=3.7e-08  Score=75.58  Aligned_cols=151  Identities=13%  Similarity=0.090  Sum_probs=97.3

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCCCCCeeeEEee
Q psy15417         24 MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIRADQELAMYSH  102 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~  102 (176)
                      ..+.|+||++++++++.||.|.++|+.+.+.+.+++.- ....+++++++|++++++. .++.+.++|.++.+.+...+.
T Consensus        40 ~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~  118 (369)
T PF02239_consen   40 AGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG-GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPT  118 (369)
T ss_dssp             EEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S-SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE-
T ss_pred             eEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC-CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeeccc
Confidence            34778999999999999999999999999999888754 3468899999999887665 578999999988877665543


Q ss_pred             cc-----eEeceEEEEECCCCcEEE-EEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCCCEEEEc-cCCCcEEE
Q psy15417        103 DN-----IICGITSVAFSRSGRLLL-AGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATG-SWDSFLRI  174 (176)
Q Consensus       103 ~~-----~~~~v~~~~~~~~~~~l~-~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~tg-~~d~~v~v  174 (176)
                      ..     ...++..+..+|....++ +--+.+.|-+-|....+.+. ....-........|.|++.+++.+ ..+..|-+
T Consensus       119 ~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~v  198 (369)
T PF02239_consen  119 GGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAV  198 (369)
T ss_dssp             -EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEE
T ss_pred             ccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEE
Confidence            22     223566777777777554 44555778777865443222 222233445677899999987654 33335544


Q ss_pred             e
Q psy15417        175 W  175 (176)
Q Consensus       175 w  175 (176)
                      +
T Consensus       199 i  199 (369)
T PF02239_consen  199 I  199 (369)
T ss_dssp             E
T ss_pred             E
Confidence            4

...

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.12  E-value=1.1e-08  Score=80.18  Aligned_cols=147  Identities=15%  Similarity=0.151  Sum_probs=94.6

Q ss_pred             cCCCccCeEEEEEcCCCCEEE-EEeCCCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CC--cEEEe
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFV-SGACDAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DA--TCRLF   89 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~-s~s~dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~--~i~iw   89 (176)
                      +..+.+.+...+|+|||+.++ +.+.++.  |.+||+.+++. ..+..+........|+|+++.++..+. ++  .|.++
T Consensus       241 l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~  319 (435)
T PRK05137        241 VGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVM  319 (435)
T ss_pred             eecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEE
Confidence            344566777899999998764 5566655  67778887764 445556666778999999988776653 33  57777


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC---CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d---~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      |+.+++........   .......|+|+++.++....+   ..+.+||...+.. ..+. ....+....|+|+|..|+..
T Consensus       320 d~~g~~~~~lt~~~---~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~  394 (435)
T PRK05137        320 NADGSNPRRISFGG---GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFF  394 (435)
T ss_pred             ECCCCCeEEeecCC---CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEE
Confidence            87655433222111   124457799999988765432   3678888654432 2222 12235567899999887654


Q ss_pred             cC
Q psy15417        167 SW  168 (176)
Q Consensus       167 ~~  168 (176)
                      +.
T Consensus       395 ~~  396 (435)
T PRK05137        395 RQ  396 (435)
T ss_pred             Ec
Confidence            43

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.09  E-value=4.3e-08  Score=75.25  Aligned_cols=134  Identities=16%  Similarity=0.182  Sum_probs=90.5

Q ss_pred             EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEEC
Q psy15417         36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS  115 (176)
Q Consensus        36 ~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~  115 (176)
                      ++-..++.|.+.|..+.+.+..++.....-..+.|+||+++++.+++|+.+.++|+.+.+.+........   ...++++
T Consensus        10 V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~---~~~i~~s   86 (369)
T PF02239_consen   10 VVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN---PRGIAVS   86 (369)
T ss_dssp             EEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE---EEEEEE-
T ss_pred             EEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC---cceEEEc
Confidence            4455689999999999999999986544445678999999999999999999999999887776654432   3468999


Q ss_pred             CCCcEEEEE-cCCCeEEEEeCCCceeeeeecCC-------CccEEEEEEeCCCCE-EEEccCCCcE
Q psy15417        116 RSGRLLLAG-YDDFNCNVWDSMKTERAGILAGH-------DNRVSCLGVTEDGMA-VATGSWDSFL  172 (176)
Q Consensus       116 ~~~~~l~~g-~~d~~i~v~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~-l~tg~~d~~v  172 (176)
                      +||++++++ ...+.+.++|.++.+++..++..       ..++..+..+|.... +++--+.+.|
T Consensus        87 ~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I  152 (369)
T PF02239_consen   87 PDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEI  152 (369)
T ss_dssp             -TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEE
T ss_pred             CCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeE
Confidence            999988765 47889999999888888776532       235666666777664 4443333444

...

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.08  E-value=9.5e-09  Score=80.47  Aligned_cols=145  Identities=14%  Similarity=0.149  Sum_probs=91.9

Q ss_pred             ccCeEEEEEcCCCCEEE-EEeCCCeEEEEEc--CCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeCC--C
Q psy15417         20 TGDVMSLSLAPDMRTFV-SGACDASAKLWDI--RDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDIR--A   93 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~-s~s~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~--~   93 (176)
                      .+.+....|+||++.++ +.+.+|...+|.+  .+++ ...+..+.+......|+|+|+.++..+. ++...+|.+.  +
T Consensus       239 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~  317 (427)
T PRK02889        239 KGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG  317 (427)
T ss_pred             CCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC
Confidence            34566889999998775 5677887666654  4444 4455555555677899999987765554 5677777653  3


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC---eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF---NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~---~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      +..... ....  .......|+|+|+.++..+.++   .|.+||+..++.......  .......|+|++..|+..+.++
T Consensus       318 g~~~~l-t~~g--~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~--~~~~~p~~spdg~~l~~~~~~~  392 (427)
T PRK02889        318 GAAQRV-TFTG--SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDT--TRDESPSFAPNGRYILYATQQG  392 (427)
T ss_pred             CceEEE-ecCC--CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCC--CCccCceECCCCCEEEEEEecC
Confidence            332221 1111  1122467999999887655443   689999876654332222  2235678999999887766544

>KOG4497|consensus

Probab=99.08  E-value=1.1e-08  Score=75.03  Aligned_cols=150  Identities=14%  Similarity=0.268  Sum_probs=101.2

Q ss_pred             cCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCCCeee
Q psy15417         21 GDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        21 ~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      ..|.-+.|..|.. .|...+.++.|++|++...+-...+.....++.+++|+|+|+ .+.+...|-.|.+|.+.+.... 
T Consensus        49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~-  127 (447)
T KOG4497|consen   49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY-  127 (447)
T ss_pred             HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE-
Confidence            4555677877766 455667788999999988777777777788999999999995 5666777889999998764332 


Q ss_pred             EEeecceEeceEEEEECCCCcEEEEEcC------------------------------------CCeEEEEeCCCceeee
Q psy15417         99 MYSHDNIICGITSVAFSRSGRLLLAGYD------------------------------------DFNCNVWDSMKTERAG  142 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~------------------------------------d~~i~v~d~~~~~~~~  142 (176)
                      ..++..  ..+..++|+|||++.+..+.                                    +.-+.|||.-..-.  
T Consensus       128 ~~~~pK--~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leyk--  203 (447)
T KOG4497|consen  128 LLPHPK--TNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYK--  203 (447)
T ss_pred             Eecccc--cCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhhe--
Confidence            222222  23456778888776554321                                    11233444211101  


Q ss_pred             eecCCC-ccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        143 ILAGHD-NRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       143 ~~~~~~-~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ....|. -.+..++|+|.+.+|+.|+.|+.+||-
T Consensus       204 v~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvl  237 (447)
T KOG4497|consen  204 VYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVL  237 (447)
T ss_pred             eeeeeeccceeEEEeccccceEEeeccchhhhhh
Confidence            112222 357788999999999999999998874

>KOG1064|consensus

Probab=99.06  E-value=1.8e-09  Score=93.19  Aligned_cols=154  Identities=16%  Similarity=0.260  Sum_probs=115.9

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      .|-..|.++.=+|...+.+||+.||.|++|....+..+..++. -++.|+.+.|+.+|+.+..+..||.+.+|... +..
T Consensus      2206 ~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~ 2284 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKP 2284 (2439)
T ss_pred             cccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccc
Confidence            3556788888889889999999999999999988876666643 23789999999999999999999999999875 222


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEE---cCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAG---YDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g---~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      .  ...+++....+.+.|-.  ..+++.   ..++.+.+||.... ..-....+|.+..+++++.|....|++||.+|.|
T Consensus      2285 ~--~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v 2360 (2439)
T KOG1064|consen 2285 Y--TSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEV 2360 (2439)
T ss_pred             e--eccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcE
Confidence            2  22333323444454432  444443   36678999995432 2222336899999999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      .+||
T Consensus      2361 ~l~D 2364 (2439)
T KOG1064|consen 2361 CLFD 2364 (2439)
T ss_pred             EEee
Confidence            9998

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.06  E-value=6.6e-10  Score=57.19  Aligned_cols=39  Identities=26%  Similarity=0.559  Sum_probs=36.2

Q ss_pred             ceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       138 ~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++++..+.+|...|.+++|+|++.+|++|+.|++|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            356788899999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1334|consensus

Probab=99.05  E-value=7.3e-10  Score=84.57  Aligned_cols=165  Identities=24%  Similarity=0.392  Sum_probs=120.9

Q ss_pred             cCCCcccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeE--ecCC-CC---CeeEEEEccCCc-EEEEee
Q psy15417         10 LLGSPAASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQT--FPGH-ES---DINAVTFFPNGW-AFATGS   81 (176)
Q Consensus        10 ~~~~~~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~--~~~h-~~---~v~~v~~~~~~~-~l~s~s   81 (176)
                      ..++..+..|.++|..++.-|+. ..|++++.|+.++-+|++.+.....  .+.+ ..   ....++..|... .+++++
T Consensus       222 ~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG  301 (559)
T KOG1334|consen  222 VENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGG  301 (559)
T ss_pred             eecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCC
Confidence            33344456799999999998865 5799999999999999987653322  2222 23   467889998754 899999


Q ss_pred             CCCcEEEeeCCCCCee------------------------eEEeecc---------------------------------
Q psy15417         82 DDATCRLFDIRADQEL------------------------AMYSHDN---------------------------------  104 (176)
Q Consensus        82 ~d~~i~iwd~~~~~~~------------------------~~~~~~~---------------------------------  104 (176)
                      .|-.+++||.+.-+..                        ..|.+..                                 
T Consensus       302 ~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~  381 (559)
T KOG1334|consen  302 SDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQ  381 (559)
T ss_pred             hhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhh
Confidence            9999999997531100                        0111000                                 


Q ss_pred             --------e-----EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417        105 --------I-----ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus       105 --------~-----~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                              +     +.+|+  =|-|...++++|+.-|.|.||+..+++.+..+.+...-|+|+--+|.-..||+.|-|..
T Consensus       382 ~~k~vYKGHrN~~TVKgVN--FfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~D  459 (559)
T KOG1334|consen  382 YVKRVYKGHRNSRTVKGVN--FFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHD  459 (559)
T ss_pred             ccchhhcccccccccceee--eccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccc
Confidence                    0     00111  15677788999999999999998888888888877678899998998899999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      ||||-
T Consensus       460 VKIWT  464 (559)
T KOG1334|consen  460 VKIWT  464 (559)
T ss_pred             eeeec
Confidence            99993

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.05  E-value=6.1e-08  Score=83.26  Aligned_cols=152  Identities=13%  Similarity=0.265  Sum_probs=105.5

Q ss_pred             EEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCC---------------CCCeeEEEEccCCc-EEEEeeCCCcE
Q psy15417         24 MSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGH---------------ESDINAVTFFPNGW-AFATGSDDATC   86 (176)
Q Consensus        24 ~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h---------------~~~v~~v~~~~~~~-~l~s~s~d~~i   86 (176)
                      ..++|+| ++.++++.+.++.|++||..++... .+.+.               -....+++++|++. .+++-+.++.|
T Consensus       686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~I  764 (1057)
T PLN02919        686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSI  764 (1057)
T ss_pred             eEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeE
Confidence            5789999 5667778788899999999876532 22111               12356799999987 55666677899


Q ss_pred             EEeeCCCCCeeeEEe-----------ec---c-----eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee---
Q psy15417         87 RLFDIRADQELAMYS-----------HD---N-----IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL---  144 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~-----------~~---~-----~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~---  144 (176)
                      ++||+.++.......           +.   .     .......++++++|.++++-..+++|++||..++......   
T Consensus       765 rv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G  844 (1057)
T PLN02919        765 RALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTG  844 (1057)
T ss_pred             EEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccC
Confidence            999987654221110           00   0     0012346889999999999999999999997665543221   


Q ss_pred             ----------cCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        145 ----------AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       145 ----------~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                                .+.......++++++|..+++-+.+++|++||
T Consensus       845 ~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid  886 (1057)
T PLN02919        845 KAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLD  886 (1057)
T ss_pred             CcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEE
Confidence                      11122456789999999989999999999996

>KOG3914|consensus

Probab=99.05  E-value=6.7e-09  Score=77.54  Aligned_cols=148  Identities=16%  Similarity=0.169  Sum_probs=96.7

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCee----eeE--ecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGSC----KQT--FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~----~~~--~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      .+.+++.+++++.+..++...++++.....    ...  +..-...++.+.........-..++...+.+|+..++....
T Consensus        67 ~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~  146 (390)
T KOG3914|consen   67 LVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEP  146 (390)
T ss_pred             ccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCcch
Confidence            455677888888888888777777654422    111  12122223333333333334444555666666654322221


Q ss_pred             EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417         99 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                         ..++..-+..++++||++.++++..|..|++-..... ....-+.+|...|+.++.-++. .|++||-|+++++||
T Consensus       147 ---~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd  221 (390)
T KOG3914|consen  147 ---ILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWD  221 (390)
T ss_pred             ---hhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEEEe
Confidence               2234456789999999999999999999999764432 2333456899999999998765 478999999999997

>KOG1409|consensus

Probab=99.04  E-value=2.1e-09  Score=78.99  Aligned_cols=78  Identities=26%  Similarity=0.515  Sum_probs=69.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|.+.+.++.|.+....|.+|..|..+.+||+.-.+ ....+.+|...|..++..+-...+++++.||.|.+||++
T Consensus       192 ~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  192 TFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             EEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence            367899999999999999999999999999999996443 356778899999999998888999999999999999975

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.04  E-value=4.5e-08  Score=77.11  Aligned_cols=152  Identities=16%  Similarity=0.123  Sum_probs=92.6

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeC-CC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCc--EEEeeC
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGAC-DA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDAT--CRLFDI   91 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~-dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~--i~iwd~   91 (176)
                      .+.+.+....|+|||+.++..+. ++  .+.+||+.+++... +....+......|+|+|+.++ +.+.++.  |.++|+
T Consensus       215 ~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl  293 (448)
T PRK04792        215 RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDI  293 (448)
T ss_pred             cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEEC
Confidence            34567788999999998876554 33  47888998876432 222233345689999998765 4566665  666787


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCC--eEEEEeCCCceeeee-ecCCCccEEEEEEeCCCCEEEEcc
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDF--NCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~--~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      .+++........   .......|+||++.++..+ .++  .+.++|+..++.... ..+.  .....+|+|+|++|+..+
T Consensus       294 ~tg~~~~lt~~~---~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~--~~~~~~~SpDG~~l~~~~  368 (448)
T PRK04792        294 ATKALTRITRHR---AIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGE--QNLGGSITPDGRSMIMVN  368 (448)
T ss_pred             CCCCeEECccCC---CCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCC--CCcCeeECCCCCEEEEEE
Confidence            765543222211   1234578999998765543 333  466677765543322 2222  223468999999887654


Q ss_pred             C-CCcEEEe
Q psy15417        168 W-DSFLRIW  175 (176)
Q Consensus       168 ~-d~~v~vw  175 (176)
                      . ++..+||
T Consensus       369 ~~~g~~~I~  377 (448)
T PRK04792        369 RTNGKFNIA  377 (448)
T ss_pred             ecCCceEEE
Confidence            4 3444443

>KOG4547|consensus

Probab=99.02  E-value=3.8e-08  Score=76.67  Aligned_cols=146  Identities=15%  Similarity=0.210  Sum_probs=116.0

Q ss_pred             cCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--C-CCCeeEEEEc------c--------------CCcEEEEeeCCCc
Q psy15417         29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPG--H-ESDINAVTFF------P--------------NGWAFATGSDDAT   85 (176)
Q Consensus        29 ~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--h-~~~v~~v~~~------~--------------~~~~l~s~s~d~~   85 (176)
                      +|...+++....||.+++||..+++....|..  | ++...+..|.      |              +-..++-|-..|.
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~   81 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS   81 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence            45667899999999999999999887776653  1 2233333332      1              1234777777889


Q ss_pred             EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      |.+++.-.++....+...++..+++++.++.+...+.++++|+.+..|+.......+...+....+..++++||+..+++
T Consensus        82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~  161 (541)
T KOG4547|consen   82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLT  161 (541)
T ss_pred             EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEe
Confidence            99999888887777777777778999998888889999999999999998888888888877888899999999999998


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      ++.  +|++||
T Consensus       162 as~--~ik~~~  170 (541)
T KOG4547|consen  162 ASR--QIKVLD  170 (541)
T ss_pred             ccc--eEEEEE
Confidence            865  698886

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.00  E-value=7.3e-08  Score=75.06  Aligned_cols=146  Identities=14%  Similarity=0.087  Sum_probs=93.3

Q ss_pred             CccCeEEEEEcCCCCEEE-EEeCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CC--cEEEeeCC
Q psy15417         19 HTGDVMSLSLAPDMRTFV-SGACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DA--TCRLFDIR   92 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~-s~s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~--~i~iwd~~   92 (176)
                      +.+.+.++.|+||++.|+ +.+.++  .+.+||+.+++. ..+..+........|+|+++.++..+. ++  .|.++|+.
T Consensus       232 ~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~  310 (417)
T TIGR02800       232 FPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD  310 (417)
T ss_pred             CCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECC
Confidence            455667789999998665 445444  488889887753 344445555567789999987765554 34  46667776


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC---eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF---NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~---~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      +++..... ...  .......|+|++..++.+..++   .+.++|+..+.... +... ......+|+|++..|+..+.+
T Consensus       311 ~~~~~~l~-~~~--~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~-l~~~-~~~~~p~~spdg~~l~~~~~~  385 (417)
T TIGR02800       311 GGEVRRLT-FRG--GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERV-LTDT-GLDESPSFAPNGRMILYATTR  385 (417)
T ss_pred             CCCEEEee-cCC--CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEE-ccCC-CCCCCceECCCCCEEEEEEeC
Confidence            55432221 111  1244678999999888877665   78889977643322 2211 122345799999888776655


Q ss_pred             C
Q psy15417        170 S  170 (176)
Q Consensus       170 ~  170 (176)
                      +
T Consensus       386 ~  386 (417)
T TIGR02800       386 G  386 (417)
T ss_pred             C
Confidence            4

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG1354|consensus

Probab=98.98  E-value=1.2e-08  Score=75.19  Aligned_cols=158  Identities=26%  Similarity=0.422  Sum_probs=111.9

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee---eeEecCC-----CCCeeEEEEccC-CcEEEEeeCCCcEE
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC---KQTFPGH-----ESDINAVTFFPN-GWAFATGSDDATCR   87 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~---~~~~~~h-----~~~v~~v~~~~~-~~~l~s~s~d~~i~   87 (176)
                      -+|.=.|++++++.|+..++++. |=.|.+|++.-...   +..++.+     +.-+++..|+|. .+.|+-++.-|+|+
T Consensus       161 NaHtyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIr  239 (433)
T KOG1354|consen  161 NAHTYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIR  239 (433)
T ss_pred             ccceeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEE
Confidence            46888999999999999999986 55699999864321   2233322     245788999996 56788888889999


Q ss_pred             EeeCCCCCe----eeEEe-e---------cceEeceEEEEECCCCcEEEEEcCCCeEEEEeC-CCceeeeeecCCC----
Q psy15417         88 LFDIRADQE----LAMYS-H---------DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS-MKTERAGILAGHD----  148 (176)
Q Consensus        88 iwd~~~~~~----~~~~~-~---------~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~-~~~~~~~~~~~~~----  148 (176)
                      +-|+|....    ...++ .         ...+..|+.+.|+++|+++++-.. -++++||+ +..+++.+.+-|.    
T Consensus       240 LcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~  318 (433)
T KOG1354|consen  240 LCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRS  318 (433)
T ss_pred             EeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHH
Confidence            999984321    11111 1         112346889999999999988654 47999997 4455555554441    


Q ss_pred             --------ccE---EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        149 --------NRV---SCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       149 --------~~i---~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                              ..|   ..++|+-++.+++|||....+++|+
T Consensus       319 kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~  357 (433)
T KOG1354|consen  319 KLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFN  357 (433)
T ss_pred             HHHHHhhccchhheeEEEEcCCcceEecccccceEEEec
Confidence                    111   3457888888999999999999985

>KOG1354|consensus

Probab=98.97  E-value=1.6e-09  Score=79.73  Aligned_cols=156  Identities=15%  Similarity=0.288  Sum_probs=106.4

Q ss_pred             CccCeEEEEEcCCCC--EEEEEeCCCeEEEEEcCCCeee-----------------------------------eEe-cC
Q psy15417         19 HTGDVMSLSLAPDMR--TFVSGACDASAKLWDIRDGSCK-----------------------------------QTF-PG   60 (176)
Q Consensus        19 h~~~V~~~~~~~~~~--~l~s~s~dg~v~~wd~~~~~~~-----------------------------------~~~-~~   60 (176)
                      -+++|+.+.|.+++.  .++....|+++++|.+......                                   +.+ .+
T Consensus        83 ieEKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNa  162 (433)
T KOG1354|consen   83 IEEKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANA  162 (433)
T ss_pred             hhhhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeecccc
Confidence            457899999988654  6777788999999997532111                                   111 25


Q ss_pred             CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe---eeEE-e--ecceEeceEEEEECCCCc-EEEEEcCCCeEEEE
Q psy15417         61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE---LAMY-S--HDNIICGITSVAFSRSGR-LLLAGYDDFNCNVW  133 (176)
Q Consensus        61 h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~---~~~~-~--~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~  133 (176)
                      |+.-++++.+..|+..++++ +|-.|.+|++.-...   +.-. +  .+....-|++..|||..+ +++-.+..|+|++-
T Consensus       163 HtyhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLc  241 (433)
T KOG1354|consen  163 HTYHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLC  241 (433)
T ss_pred             ceeEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEe
Confidence            88889999999999888876 788999999853221   1111 1  111223478889999864 66778889999999


Q ss_pred             eCCCceeee----ee------------cCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        134 DSMKTERAG----IL------------AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       134 d~~~~~~~~----~~------------~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |++......    .+            ..--..|+.+.|+++|.|+++-..- +|++||
T Consensus       242 DmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyl-tvk~wD  299 (433)
T KOG1354|consen  242 DMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYL-TVKLWD  299 (433)
T ss_pred             echhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccc-eeEEEe
Confidence            976321110    00            0111357788999999999887543 899997

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.95  E-value=1.7e-07  Score=73.50  Aligned_cols=142  Identities=12%  Similarity=0.121  Sum_probs=83.5

Q ss_pred             cCeEEEEEcCCCCEEEEEeC-----CCeEEEEEcCCC---eeeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeC
Q psy15417         21 GDVMSLSLAPDMRTFVSGAC-----DASAKLWDIRDG---SCKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDI   91 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~-----dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~   91 (176)
                      +......|+|||+.|+..+.     +..+..|++..+   +......++.......+|+|+|+.|+..+ .++...+|.+
T Consensus       231 g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~  310 (428)
T PRK01029        231 GNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIM  310 (428)
T ss_pred             CCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEE
Confidence            34456789999987765442     223445777653   33333333333446789999998766554 5676666643


Q ss_pred             --CC-CCeeeEEeecceEeceEEEEECCCCcEEEEEcCC---CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         92 --RA-DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        92 --~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d---~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                        .. +..........  ..+....|+|||+.++....+   ..|.+||+..++..... .....+....|+|+|..|+.
T Consensus       311 ~~~~~g~~~~~lt~~~--~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt-~~~~~~~~p~wSpDG~~L~f  387 (428)
T PRK01029        311 QIDPEGQSPRLLTKKY--RNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLT-TSPENKESPSWAIDSLHLVY  387 (428)
T ss_pred             ECcccccceEEeccCC--CCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEcc-CCCCCccceEECCCCCEEEE
Confidence              21 11111111111  234567899999977654332   46899998777553322 22234566889999988763

>KOG2695|consensus

Probab=98.95  E-value=2.4e-09  Score=78.84  Aligned_cols=137  Identities=13%  Similarity=0.206  Sum_probs=100.1

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-----eeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-----SCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-----~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.|.++.|...+.++..|..+|.|..+|++..     .+...+- |.+.|++++... ++.+|.+++-+|+|++||+|.
T Consensus       252 ksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~  330 (425)
T KOG2695|consen  252 KSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRA  330 (425)
T ss_pred             chhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhhhccccceEeeccCcCceeEeeehh
Confidence            456788889888899999999999999999865     2333333 889999998887 788899999999999999986


Q ss_pred             CCee-eEEeecceEec--eEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC----CccEEEEEEe
Q psy15417         94 DQEL-AMYSHDNIICG--ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH----DNRVSCLGVT  157 (176)
Q Consensus        94 ~~~~-~~~~~~~~~~~--v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~----~~~i~~~~~~  157 (176)
                      -+.. ....++.+...  -.-+..+++...+++++.|...|+|.+..+..+.+++-.    ...+..++|.
T Consensus       331 ~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~  401 (425)
T KOG2695|consen  331 TKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD  401 (425)
T ss_pred             hhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence            5541 12223332211  112445666677888999999999999988888877533    2245556664

>KOG0280|consensus

Probab=98.88  E-value=4.7e-07  Score=65.61  Aligned_cols=155  Identities=13%  Similarity=0.100  Sum_probs=100.2

Q ss_pred             CeEEEEEcC---CCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCC---CC---eeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         22 DVMSLSLAP---DMR-TFVSGACDASAKLWDIRDGSCKQTFPGHE---SD---INAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        22 ~V~~~~~~~---~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~---~~---v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      .+..+.|..   ++. .++-+...|.+.++.....+....+++-.   -.   -.++.|++.+..++++..+|.+.+-+.
T Consensus        71 ~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~  150 (339)
T KOG0280|consen   71 TEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYE  150 (339)
T ss_pred             ccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEec
Confidence            344555542   344 56777788999999887666566665432   12   346788899999999999999885443


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCC-Cceeeee-ecCCCccEEEEEEeC-CCCEEEEcc
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSM-KTERAGI-LAGHDNRVSCLGVTE-DGMAVATGS  167 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~-~~~~~~~-~~~~~~~i~~~~~~~-~~~~l~tg~  167 (176)
                      ...........+.+.-++=...|+.. .+++.+|+.|+.+.-||++ .++.+.. ..-|...|.++.-+| .+.+|+||+
T Consensus       151 t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGs  230 (339)
T KOG0280|consen  151 TEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGS  230 (339)
T ss_pred             ceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEec
Confidence            32211111111111122333445443 3688999999999999976 2333333 445667777776654 467999999


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      .|.+|++||
T Consensus       231 YDe~i~~~D  239 (339)
T KOG0280|consen  231 YDECIRVLD  239 (339)
T ss_pred             cccceeeee
Confidence            999999997

>KOG1275|consensus

Probab=98.88  E-value=2.6e-08  Score=81.44  Aligned_cols=146  Identities=19%  Similarity=0.288  Sum_probs=107.1

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC---------CCcEEEeeCCC
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD---------DATCRLFDIRA   93 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~---------d~~i~iwd~~~   93 (176)
                      |.-|+  .+++.+.+|...|+|.+-|.++.+.+.++..|++.+.....  .|++|++||.         |..+++||+|.
T Consensus       180 v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRm  255 (1118)
T KOG1275|consen  180 VTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRM  255 (1118)
T ss_pred             eEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhh
Confidence            44444  46789999999999999999999999999999998866554  6899999975         55679999986


Q ss_pred             CCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCC-cee-ee--eecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMK-TER-AG--ILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~-~~~-~~--~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      ...+.-.++..   ...-+.|+|.- ..+++.+..|+..+-|... ..+ ..  .+......+..+.+++++..+|-|-.
T Consensus       256 mral~PI~~~~---~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~  332 (1118)
T KOG1275|consen  256 MRALSPIQFPY---GPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDH  332 (1118)
T ss_pred             hhccCCccccc---CchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecc
Confidence            54443222221   22446788875 4677788889998888221 111 11  12222344889999999999999999


Q ss_pred             CCcEEEe
Q psy15417        169 DSFLRIW  175 (176)
Q Consensus       169 d~~v~vw  175 (176)
                      +|.|.+|
T Consensus       333 ~g~v~~w  339 (1118)
T KOG1275|consen  333 EGHVNLW  339 (1118)
T ss_pred             cCcEeee
Confidence            9999999

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.85  E-value=5.1e-06  Score=63.43  Aligned_cols=155  Identities=15%  Similarity=0.152  Sum_probs=96.5

Q ss_pred             cCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCe--ee--eEecC-CCCCeeEEEEccCCcEEEEee-CCCcEEEeeCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGS--CK--QTFPG-HESDINAVTFFPNGWAFATGS-DDATCRLFDIRA   93 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~--~~--~~~~~-h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~   93 (176)
                      ....++.|+|+++++++... ...|.+|+++...  +.  ..+.. .....+.+.|+|+++.++... .+++|.++++..
T Consensus       144 ~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~  223 (345)
T PF10282_consen  144 PHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDP  223 (345)
T ss_dssp             TCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred             ccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecc
Confidence            45678999999998877643 3458899987654  32  23322 345689999999988765554 467899998872


Q ss_pred             CC-eeeEE---eec--ce--EeceEEEEECCCCcEEEEEc-CCCeEEEEeCCC--c--eeeeeecCCCccEEEEEEeCCC
Q psy15417         94 DQ-ELAMY---SHD--NI--ICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMK--T--ERAGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus        94 ~~-~~~~~---~~~--~~--~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~--~--~~~~~~~~~~~~i~~~~~~~~~  160 (176)
                      .. .+...   ...  ..  ......+.++|++++|++.. .+..|.+|++..  +  +.+.........-..++++|+|
T Consensus       224 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g  303 (345)
T PF10282_consen  224 SDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDG  303 (345)
T ss_dssp             TTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTS
T ss_pred             cCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCC
Confidence            21 22111   110  00  01356789999999876654 566899999732  2  2333343333446889999999


Q ss_pred             CEEEEcc-CCCcEEEe
Q psy15417        161 MAVATGS-WDSFLRIW  175 (176)
Q Consensus       161 ~~l~tg~-~d~~v~vw  175 (176)
                      ++|+++. .++.|.+|
T Consensus       304 ~~l~Va~~~s~~v~vf  319 (345)
T PF10282_consen  304 RYLYVANQDSNTVSVF  319 (345)
T ss_dssp             SEEEEEETTTTEEEEE
T ss_pred             CEEEEEecCCCeEEEE
Confidence            9987665 55678777

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2315|consensus

Probab=98.84  E-value=5e-07  Score=70.38  Aligned_cols=126  Identities=19%  Similarity=0.314  Sum_probs=88.8

Q ss_pred             eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-C-CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcE
Q psy15417         43 SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-D-DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL  120 (176)
Q Consensus        43 ~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~-d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  120 (176)
                      ++.+++++...+.-.+. -.+||-+++|+|+++-|+.+- - --.+.++|++.. .+  +.+..  .+-+++-|+|.|++
T Consensus       252 ~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~-~v--~df~e--gpRN~~~fnp~g~i  325 (566)
T KOG2315|consen  252 TLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK-PV--FDFPE--GPRNTAFFNPHGNI  325 (566)
T ss_pred             eEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC-Ee--EeCCC--CCccceEECCCCCE
Confidence            56677776334444444 368999999999998766553 2 346899998743 22  22221  24567889999998


Q ss_pred             EEEE---cCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC------CCcEEEeC
Q psy15417        121 LLAG---YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW------DSFLRIWN  176 (176)
Q Consensus       121 l~~g---~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~------d~~v~vwd  176 (176)
                      ++.+   ...|.|-|||....+++..+..-...  -..|+|+|.+|.|+..      |..++||+
T Consensus       326 i~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt--~~eW~PdGe~flTATTaPRlrvdNg~Kiwh  388 (566)
T KOG2315|consen  326 ILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTT--VFEWSPDGEYFLTATTAPRLRVDNGIKIWH  388 (566)
T ss_pred             EEEeecCCCCCceEEEeccchhhccccccCCce--EEEEcCCCcEEEEEeccccEEecCCeEEEE
Confidence            7653   35588999999988888877654433  4679999999987765      67788885

>KOG1240|consensus

Probab=98.84  E-value=5e-07  Score=76.15  Aligned_cols=157  Identities=17%  Similarity=0.209  Sum_probs=107.6

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--e-----eee-----------E-----------------------
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG--S-----CKQ-----------T-----------------------   57 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~--~-----~~~-----------~-----------------------   57 (176)
                      ....+.++.+.+++..++.++.||.|.+.+++-.  +     +.+           .                       
T Consensus      1097 ~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv 1176 (1431)
T KOG1240|consen 1097 EGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIV 1176 (1431)
T ss_pred             cCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceE
Confidence            3567888888999999999999999999887541  0     000           0                       


Q ss_pred             ------------e--cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCC---CcE
Q psy15417         58 ------------F--PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS---GRL  120 (176)
Q Consensus        58 ------------~--~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~  120 (176)
                                  +  ....+.|++++.+|-+++++.|...|.+-+||+|-...+..+.++.. .++..+..+|-   ...
T Consensus      1177 ~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~-~~i~~v~~~~~~~~~S~ 1255 (1431)
T KOG1240|consen 1177 SWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR-APIRHVWLCPTYPQESV 1255 (1431)
T ss_pred             EecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCccc-CCcceEEeeccCCCCce
Confidence                        0  01236699999999999999999999999999998877777766544 45555555543   234


Q ss_pred             E-EEEc-CCCeEEEEeCCCceeeeeecCC-------------------CccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        121 L-LAGY-DDFNCNVWDSMKTERAGILAGH-------------------DNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       121 l-~~g~-~d~~i~v~d~~~~~~~~~~~~~-------------------~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      . .++. ..+-+-+|+++++.+...+..-                   .-.....++...+..+.+|+.|..||.||
T Consensus      1256 ~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD 1332 (1431)
T KOG1240|consen 1256 SVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWD 1332 (1431)
T ss_pred             EEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeecc
Confidence            4 3444 5667999998877543332111                   11112223444456788999999999998

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.81  E-value=5.7e-07  Score=70.53  Aligned_cols=158  Identities=13%  Similarity=0.061  Sum_probs=88.5

Q ss_pred             cCCCccCeEEEEEcCCCCE---EEEEeCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CC----c
Q psy15417         16 ASGHTGDVMSLSLAPDMRT---FVSGACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DA----T   85 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~---l~s~s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~----~   85 (176)
                      ++...+.+..-.|+|||+.   +++...+|  .|.+.++..++... +....+......|+|||+.|+-.+. ++    .
T Consensus       180 lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~  258 (428)
T PRK01029        180 LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMPTFSPRKKLLAFISDRYGNPDLF  258 (428)
T ss_pred             cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccceEECCCCCEEEEEECCCCCccee
Confidence            3334556677899999874   23444444  46777887775332 2223344556899999987765543 23    3


Q ss_pred             EEEeeCCCC---CeeeEEeecceEeceEEEEECCCCcEEEEEc-CCCeEEEE--eCCC-ceeeeeecCCCccEEEEEEeC
Q psy15417         86 CRLFDIRAD---QELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVW--DSMK-TERAGILAGHDNRVSCLGVTE  158 (176)
Q Consensus        86 i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~--d~~~-~~~~~~~~~~~~~i~~~~~~~  158 (176)
                      +..|++..+   ..........  .......|+|||+.++..+ .++...+|  ++.. +.....+..+...+...+|+|
T Consensus       259 ~~~~~~~~g~~g~~~~lt~~~~--~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSP  336 (428)
T PRK01029        259 IQSFSLETGAIGKPRRLLNEAF--GTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSP  336 (428)
T ss_pred             EEEeecccCCCCcceEeecCCC--CCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECC
Confidence            444666542   2112211111  1123568999998665543 45654555  4322 222222333344556788999


Q ss_pred             CCCEEEEccCC---CcEEEeC
Q psy15417        159 DGMAVATGSWD---SFLRIWN  176 (176)
Q Consensus       159 ~~~~l~tg~~d---~~v~vwd  176 (176)
                      +|+.|+..+.+   ..|.+||
T Consensus       337 DG~~Laf~~~~~g~~~I~v~d  357 (428)
T PRK01029        337 DGKKIAFCSVIKGVRQICVYD  357 (428)
T ss_pred             CCCEEEEEEcCCCCcEEEEEE
Confidence            99988765443   2466664

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.81  E-value=1.4e-06  Score=68.30  Aligned_cols=142  Identities=11%  Similarity=0.017  Sum_probs=87.3

Q ss_pred             cCeEEEEEcCCCCEEE-EEeCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-CCC--cEEEeeCCCC
Q psy15417         21 GDVMSLSLAPDMRTFV-SGACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-DDA--TCRLFDIRAD   94 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~-s~s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~--~i~iwd~~~~   94 (176)
                      +.+....|+|||+.++ +.+.+|  .+.+||+++++.. .+..+........|+|+++.++-.+ .++  .|.++++.++
T Consensus       243 g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g  321 (430)
T PRK00178        243 GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGG  321 (430)
T ss_pred             CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            4455689999998776 555555  5788899887644 4555555566788999998765554 344  4666677665


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcC-CC--eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYD-DF--NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      +..... ...  .......|+|++..++.... ++  .+.++|+.+++....-..  .......|+|+|..++-.+.
T Consensus       322 ~~~~lt-~~~--~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~--~~~~~p~~spdg~~i~~~~~  393 (430)
T PRK00178        322 RAERVT-FVG--NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDT--SLDESPSVAPNGTMLIYATR  393 (430)
T ss_pred             CEEEee-cCC--CCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCC--CCCCCceECCCCCEEEEEEe
Confidence            532221 111  11224679999988766543 33  577889776543222111  11223579999988865544

>KOG3914|consensus

Probab=98.81  E-value=1.4e-08  Score=75.85  Aligned_cols=86  Identities=20%  Similarity=0.324  Sum_probs=71.4

Q ss_pred             cccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE-ecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         14 PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ...-||...++.+.|+||+++++++..|+.|++-.....-.+.. +.||+.-|..++..++. .|+++|-|+++++||++
T Consensus       145 ~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd~~  223 (390)
T KOG3914|consen  145 EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWDIT  223 (390)
T ss_pred             chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEEEecc
Confidence            34568999999999999999999999999999877765444444 35799999999998655 59999999999999999


Q ss_pred             CCCeeeEE
Q psy15417         93 ADQELAMY  100 (176)
Q Consensus        93 ~~~~~~~~  100 (176)
                      ++..+...
T Consensus       224 sgk~L~t~  231 (390)
T KOG3914|consen  224 SGKLLDTC  231 (390)
T ss_pred             cCCccccc
Confidence            88766433

>KOG4714|consensus

Probab=98.80  E-value=5.4e-08  Score=69.38  Aligned_cols=71  Identities=25%  Similarity=0.377  Sum_probs=60.5

Q ss_pred             eEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCee-eeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCC
Q psy15417         23 VMSLSLAPD-MRTFVSGACDASAKLWDIRDGSC-KQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        23 V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~   93 (176)
                      |.+++-+|. ...++.|+.||.+-+||++.... ...++.|+.+++.+-|+|. +.+|++++.||.+..||..+
T Consensus       182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             chhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            888888884 55778888999999999988743 3467789999999999996 78999999999999999753

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.78  E-value=1.7e-06  Score=66.70  Aligned_cols=144  Identities=17%  Similarity=0.165  Sum_probs=106.2

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCC-eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDA-SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg-~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      .+|.+.|.-..+..++.-++.|..|| .+-++|.++++.. .+.+.-+.|.++..+|+|+.++.+..-..+.+.|+.++.
T Consensus       356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~k-r~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn  434 (668)
T COG4946         356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVK-RIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN  434 (668)
T ss_pred             cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEE-EeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence            46888888888888888899999999 6899999988744 444456789999999999999988877778888988765


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCC----eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF----NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~----~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      ....-..  ...-|..++|||++++++-+.-+|    .|+++|+..++....-. .+..-.+-||.|++.+|.
T Consensus       435 v~~idkS--~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT-~ta~DfsPaFD~d~ryLY  504 (668)
T COG4946         435 VRLIDKS--EYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT-PTAYDFSPAFDPDGRYLY  504 (668)
T ss_pred             eeEeccc--ccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC-CcccccCcccCCCCcEEE
Confidence            4322111  113477899999999998877665    68999987766544222 222223457888887753

>KOG4497|consensus

Probab=98.76  E-value=4.5e-07  Score=66.86  Aligned_cols=148  Identities=12%  Similarity=0.086  Sum_probs=103.7

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee---------------------------------------------
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK---------------------------------------------   55 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~---------------------------------------------   55 (176)
                      -.+..+.|+|.+++|+.|+.|+.+++.|.-+-+..                                             
T Consensus       211 lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~  290 (447)
T KOG4497|consen  211 LGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWE  290 (447)
T ss_pred             cceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccc
Confidence            46788999999999999999999988663211000                                             


Q ss_pred             ---------------eEec------CCCCCeeEEEEccCCcEEEEeeCC--CcEEEeeCCCCCeeeEEeecceEeceEEE
Q psy15417         56 ---------------QTFP------GHESDINAVTFFPNGWAFATGSDD--ATCRLFDIRADQELAMYSHDNIICGITSV  112 (176)
Q Consensus        56 ---------------~~~~------~h~~~v~~v~~~~~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~~~~~~~v~~~  112 (176)
                                     ..++      ...-.+.-++|++|..++++-.+.  +.+.+||++.-+.-+.....   .+|-..
T Consensus       291 ~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk---~piraf  367 (447)
T KOG4497|consen  291 ESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQK---HPIRAF  367 (447)
T ss_pred             cchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhc---cceeEE
Confidence                           0000      112235568999998877776442  57899999765443333322   356789


Q ss_pred             EECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417        113 AFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus       113 ~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      .|+|..+.++.+.....+++|.. .+....-.+.....|..+.|..+|..++.++.|..+
T Consensus       368 ~WdP~~prL~vctg~srLY~W~p-sg~~~V~vP~~GF~i~~l~W~~~g~~i~l~~kDafc  426 (447)
T KOG4497|consen  368 EWDPGRPRLVVCTGKSRLYFWAP-SGPRVVGVPKKGFNIQKLQWLQPGEFIVLCGKDAFC  426 (447)
T ss_pred             EeCCCCceEEEEcCCceEEEEcC-CCceEEecCCCCceeeeEEecCCCcEEEEEcCCceE
Confidence            99999998888888888999984 444444444455678999999999999999988754

>KOG1409|consensus

Probab=98.76  E-value=3.1e-07  Score=67.90  Aligned_cols=156  Identities=16%  Similarity=0.284  Sum_probs=119.6

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEc----CCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDI----RDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~----~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      .+++++.+.+....|+.|-.+|++--+-.    +.-...+.+..|...|..+-|+...+++++.+.|..+.---.+++..
T Consensus        69 ~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~  148 (404)
T KOG1409|consen   69 SPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNR  148 (404)
T ss_pred             CCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCc
Confidence            56788999999999999999999976644    34445677788999999999998899999999987765433333211


Q ss_pred             eeE---------------Ee------------------------ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417         97 LAM---------------YS------------------------HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus        97 ~~~---------------~~------------------------~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~  137 (176)
                      +.-               +.                        ...+..++.+..|.|....+.+|..|..+-+||+..
T Consensus       149 lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg  228 (404)
T KOG1409|consen  149 LGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGG  228 (404)
T ss_pred             ccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccC
Confidence            100               00                        112223577889999999999999999999999765


Q ss_pred             ce-eeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        138 TE-RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       138 ~~-~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .+ ......+|++.+..+...+.-..+.+++.||.|-+||
T Consensus       229 ~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~  268 (404)
T KOG1409|consen  229 RKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWN  268 (404)
T ss_pred             CcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEe
Confidence            43 4456778999999988888888899999999999996

>KOG1064|consensus

Probab=98.72  E-value=2.8e-08  Score=86.14  Aligned_cols=142  Identities=18%  Similarity=0.239  Sum_probs=106.6

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee---CCCcEEEeeCCCCCee
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS---DDATCRLFDIRADQEL   97 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s---~d~~i~iwd~~~~~~~   97 (176)
                      ..|..+.|+.+|..+..+..||.+.+|.+. .+.....+-|........|-.  ..+++++   +++.+.+||.--....
T Consensus      2252 s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~ 2328 (2439)
T KOG1064|consen 2252 SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMN 2328 (2439)
T ss_pred             chhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCccc
Confidence            556667788889999999999999999987 455566777888888888865  4556654   4578999995432222


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ... +..+..+.+++++-|....+++|+.+|.+++||+...+...+++.         +. ...++++|+..|.++||+
T Consensus      2329 s~v-~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~ 2396 (2439)
T KOG1064|consen 2329 SLV-HTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWR 2396 (2439)
T ss_pred             cee-eeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEE
Confidence            222 234446788999999999999999999999999866555444432         33 457899999999999995

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.71  E-value=1.2e-05  Score=58.29  Aligned_cols=152  Identities=16%  Similarity=0.280  Sum_probs=97.7

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC-------CCCCeeEEEEccCC------cEEEEeeCCCcEEEee
Q psy15417         24 MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG-------HESDINAVTFFPNG------WAFATGSDDATCRLFD   90 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-------h~~~v~~v~~~~~~------~~l~s~s~d~~i~iwd   90 (176)
                      ..++||||+.+|+.+...|+|.++|+-..+ +..++.       -...|.++.|.+..      ..|+.-.-+|.++-+-
T Consensus        47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~  125 (282)
T PF15492_consen   47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYL  125 (282)
T ss_pred             eEEEECCCCcEEEEEcCCCeEEEEecccce-eEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEE
Confidence            469999999999999999999999986433 223322       13557777776532      2466667777777665


Q ss_pred             CCC--CC---eeeEEeec-ceEeceEEEEECCCCcEEEEEcCC-C----------eEEEEeCCCcee-------------
Q psy15417         91 IRA--DQ---ELAMYSHD-NIICGITSVAFSRSGRLLLAGYDD-F----------NCNVWDSMKTER-------------  140 (176)
Q Consensus        91 ~~~--~~---~~~~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d-~----------~i~v~d~~~~~~-------------  140 (176)
                      +..  .+   ....+.+. ....+|+++.++|..++|++|+.. .          -+..|-+....+             
T Consensus       126 vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~  205 (282)
T PF15492_consen  126 VSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDIT  205 (282)
T ss_pred             EEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCcccc
Confidence            421  11   12223322 123478999999998888776532 1          133443221110             


Q ss_pred             -------eee---------ecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        141 -------AGI---------LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       141 -------~~~---------~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                             ...         .......|..|..+|||..||+...+|.+-+|+
T Consensus       206 ~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~  257 (282)
T PF15492_consen  206 ASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWE  257 (282)
T ss_pred             ccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEe
Confidence                   000         011245688999999999999999999999995

>KOG0309|consensus

Probab=98.69  E-value=5.5e-08  Score=78.15  Aligned_cols=121  Identities=15%  Similarity=0.248  Sum_probs=85.3

Q ss_pred             cccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCe-eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         14 PAASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      +.+.||...|+.+.|.|+. ..+++++.|-.|..||+++.. ....+..-...-.-|+|.-....+.+.+..+.|++||+
T Consensus       108 f~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~  187 (1081)
T KOG0309|consen  108 FVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDL  187 (1081)
T ss_pred             EEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEec
Confidence            3578999999999999865 589999999999999999864 33333333344566888765556666677788999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeC
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDS  135 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~  135 (176)
                      +.+...... ...++..++.++|+.- ...+.+...|++++.||-
T Consensus       188 r~gs~pl~s-~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y  231 (1081)
T KOG0309|consen  188 RKGSTPLCS-LKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDY  231 (1081)
T ss_pred             cCCCcceEE-ecccceeeehHHHhhhhhhhhcccCCCCceeeecc
Confidence            876543322 2224456677766543 234566778888888873

>KOG2695|consensus

Probab=98.69  E-value=9.4e-08  Score=70.64  Aligned_cols=135  Identities=22%  Similarity=0.263  Sum_probs=97.0

Q ss_pred             EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC-----eeeEEeecceEeceE
Q psy15417         36 VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-----ELAMYSHDNIICGIT  110 (176)
Q Consensus        36 ~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~-----~~~~~~~~~~~~~v~  110 (176)
                      ++.+.+-.|.+-|+.++- ...|. ..+.|.+++|+..+++++.|.+.|.|...|+|...     ....+.++.   .|+
T Consensus       228 fs~G~sqqv~L~nvetg~-~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~S---svt  302 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGH-QQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDS---SVT  302 (425)
T ss_pred             ecccccceeEEEEeeccc-ccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCc---chh
Confidence            444556678888988773 33343 56779999999999999999999999999998542     222333443   344


Q ss_pred             EEEECC-CCcEEEEEcCCCeEEEEeCCCcee---eeeecCCCccEE--EEEEeCCCCEEEEccCCCcEEEe
Q psy15417        111 SVAFSR-SGRLLLAGYDDFNCNVWDSMKTER---AGILAGHDNRVS--CLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       111 ~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~---~~~~~~~~~~i~--~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ++..-. +++.|.+.+-+|+|++||+...++   +....+|.+.-.  .+-+.+....++++++|...|||
T Consensus       303 slq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiW  373 (425)
T KOG2695|consen  303 SLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIW  373 (425)
T ss_pred             hhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEE
Confidence            444333 678888889999999999876665   777788865322  22345666678889999999999

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.67  E-value=2.4e-05  Score=59.76  Aligned_cols=153  Identities=16%  Similarity=0.196  Sum_probs=97.6

Q ss_pred             eEEEEEcCCCCEEEEEeC----CCeEEEEEcCC--Ce--eeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeCCC
Q psy15417         23 VMSLSLAPDMRTFVSGAC----DASAKLWDIRD--GS--CKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDIRA   93 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~----dg~v~~wd~~~--~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~   93 (176)
                      ..-+.++|++++|++...    ++.|..|++..  ++  .+............++++|+++.++++.. ++.+.++++..
T Consensus        39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~  118 (345)
T PF10282_consen   39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDD  118 (345)
T ss_dssp             ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccC
Confidence            345788999999988877    46898888765  33  33344433455678999999998888874 78999999976


Q ss_pred             CCeeeE----Eeec--------ceEeceEEEEECCCCcEEEEE-cCCCeEEEEeCCCce--e--eeee-cCCCccEEEEE
Q psy15417         94 DQELAM----YSHD--------NIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSMKTE--R--AGIL-AGHDNRVSCLG  155 (176)
Q Consensus        94 ~~~~~~----~~~~--------~~~~~v~~~~~~~~~~~l~~g-~~d~~i~v~d~~~~~--~--~~~~-~~~~~~i~~~~  155 (176)
                      ...+..    ..+.        .......++.++|+++++++. .....|++|++....  .  ...+ ......-+.++
T Consensus       119 ~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~  198 (345)
T PF10282_consen  119 DGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLA  198 (345)
T ss_dssp             TSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEE
T ss_pred             CcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEE
Confidence            433221    1110        111246789999999877664 334478899876543  2  1122 12233457899


Q ss_pred             EeCCCCEE-EEccCCCcEEEe
Q psy15417        156 VTEDGMAV-ATGSWDSFLRIW  175 (176)
Q Consensus       156 ~~~~~~~l-~tg~~d~~v~vw  175 (176)
                      |+|+++++ ++.-.+++|.+|
T Consensus       199 f~pdg~~~Yv~~e~s~~v~v~  219 (345)
T PF10282_consen  199 FSPDGKYAYVVNELSNTVSVF  219 (345)
T ss_dssp             E-TTSSEEEEEETTTTEEEEE
T ss_pred             EcCCcCEEEEecCCCCcEEEE
Confidence            99998876 455566677766

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG4532|consensus

Probab=98.66  E-value=3.4e-06  Score=60.70  Aligned_cols=125  Identities=14%  Similarity=0.113  Sum_probs=86.4

Q ss_pred             EEEEEeCCCeEEEEEcCCCeeeeEecCCCCC--eeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE-eecceEeceE
Q psy15417         34 TFVSGACDASAKLWDIRDGSCKQTFPGHESD--INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGIT  110 (176)
Q Consensus        34 ~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~--v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~~~~~~~v~  110 (176)
                      -+..++.|.++++.++.-+...  +..|...  ++++.+++++++.++.++.+.|..|.+..+....+. ........-.
T Consensus       130 ~~~i~sndht~k~~~~~~~s~~--~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF  207 (344)
T KOG4532|consen  130 PLNIASNDHTGKTMVVSGDSNK--FAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGF  207 (344)
T ss_pred             ceeeccCCcceeEEEEecCccc--ceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCce
Confidence            3566777888887776533211  1223333  889999999999999999999999998654432211 1111112234


Q ss_pred             EEEECCCCcEEEEEcCCCeEEEEeCCCc-ee----eeeecCCCccEEEEEEeCCC
Q psy15417        111 SVAFSRSGRLLLAGYDDFNCNVWDSMKT-ER----AGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus       111 ~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~----~~~~~~~~~~i~~~~~~~~~  160 (176)
                      +..|+.....+++++.||++.|||++.- .+    ..+.+.|++.+..+.|++.|
T Consensus       208 ~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g  262 (344)
T KOG4532|consen  208 YNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYG  262 (344)
T ss_pred             eeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCC
Confidence            6789988899999999999999997642 22    22345688899999999754

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.66  E-value=5.8e-06  Score=65.30  Aligned_cols=140  Identities=12%  Similarity=0.072  Sum_probs=83.4

Q ss_pred             eEEEEEcCCCCEEE-EEeCCCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-CCCc--EEEeeCCCCCe
Q psy15417         23 VMSLSLAPDMRTFV-SGACDAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-DDAT--CRLFDIRADQE   96 (176)
Q Consensus        23 V~~~~~~~~~~~l~-s~s~dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~--i~iwd~~~~~~   96 (176)
                      .....|+||++.|+ +.+.++.  |.++|+.+++. ..+..+........|+|+++.++..+ .++.  |.++|+.+++.
T Consensus       264 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~  342 (448)
T PRK04792        264 NGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV  342 (448)
T ss_pred             cCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence            34678999999765 4566665  77778887764 34444555567789999998765544 3444  55556665554


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcC-CC--eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYD-DF--NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      .... ....  ......|+|+++.++.... ++  .|.++|+..++... +... ......+|+|+|..|+..+.
T Consensus       343 ~~Lt-~~g~--~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~-~~d~~ps~spdG~~I~~~~~  412 (448)
T PRK04792        343 SRLT-FEGE--QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTST-RLDESPSVAPNGTMVIYSTT  412 (448)
T ss_pred             EEEe-cCCC--CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccCC-CCCCCceECCCCCEEEEEEe
Confidence            3221 1111  1223579999987765443 34  45557776654322 2211 11123479999988765443

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.62  E-value=2.8e-07  Score=67.48  Aligned_cols=155  Identities=15%  Similarity=0.259  Sum_probs=101.0

Q ss_pred             ccCeEEEEEcCCCC--EEEEEeCCCeEEEEEcCCCee------------------------------------------e
Q psy15417         20 TGDVMSLSLAPDMR--TFVSGACDASAKLWDIRDGSC------------------------------------------K   55 (176)
Q Consensus        20 ~~~V~~~~~~~~~~--~l~s~s~dg~v~~wd~~~~~~------------------------------------------~   55 (176)
                      ++.|+.+.|..++.  .++..+.|+++++|.+.....                                          .
T Consensus        85 eEKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~  164 (460)
T COG5170          85 EEKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPC  164 (460)
T ss_pred             HHHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccc
Confidence            45788888876543  677778899999998753200                                          0


Q ss_pred             eEe-cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee---eEE-ee--cceEeceEEEEECCCCc-EEEEEcCC
Q psy15417         56 QTF-PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL---AMY-SH--DNIICGITSVAFSRSGR-LLLAGYDD  127 (176)
Q Consensus        56 ~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~---~~~-~~--~~~~~~v~~~~~~~~~~-~l~~g~~d  127 (176)
                      +.+ ..|+.-++++.|..+...++++ +|-.|.+|++.-....   .-. ++  .....-|++..|||... .+.-.+..
T Consensus       165 rvyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSk  243 (460)
T COG5170         165 RVYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSK  243 (460)
T ss_pred             eeccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCC
Confidence            001 2477778999999888777765 6789999998643221   111 11  11123467889999865 45556778


Q ss_pred             CeEEEEeCCCceee------e--ee--------cCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        128 FNCNVWDSMKTERA------G--IL--------AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       128 ~~i~v~d~~~~~~~------~--~~--------~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |.|++-|++.....      -  .+        .+-...|+.+.|+++|.+|++-..- +|+|||
T Consensus       244 G~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl-tvkiwD  307 (460)
T COG5170         244 GEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL-TVKIWD  307 (460)
T ss_pred             CcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc-eEEEEe
Confidence            99999997532110      0  00        1112357788999999999877554 899997

>KOG2066|consensus

Probab=98.61  E-value=2.7e-06  Score=69.01  Aligned_cols=150  Identities=16%  Similarity=0.230  Sum_probs=97.0

Q ss_pred             cCCCccCeEEEEEcCC-------------CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-----CcEE
Q psy15417         16 ASGHTGDVMSLSLAPD-------------MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-----GWAF   77 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~-------------~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-----~~~l   77 (176)
                      +-.|++.|....+..+             |.+++|||.||+|.+--+-+.+...++. -..++.+++++|+     .+.+
T Consensus        54 ~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~f  132 (846)
T KOG2066|consen   54 LGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQF  132 (846)
T ss_pred             eccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhhe
Confidence            4458887777666555             8999999999999998887766444443 2467999999998     5679


Q ss_pred             EEeeCCCcEEEeeCC---CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccE---
Q psy15417         78 ATGSDDATCRLFDIR---ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV---  151 (176)
Q Consensus        78 ~s~s~d~~i~iwd~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i---  151 (176)
                      ++|+.-| +-++.=+   ....+....   ...+|.++.|.  |.+++=++.+| ++|||...+..+..++.....+   
T Consensus       133 v~GG~ag-lvL~er~wlgnk~~v~l~~---~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e  205 (846)
T KOG2066|consen  133 VSGGMAG-LVLSERNWLGNKDSVVLSE---GEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPE  205 (846)
T ss_pred             eecCcce-EEEehhhhhcCccceeeec---CccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcc
Confidence            9999988 6665411   111111111   22468888884  56665555555 8999988777766554332222   


Q ss_pred             ---EEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        152 ---SCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       152 ---~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                         ..+.|.++. .|+.| |..+|+|.
T Consensus       206 ~fpphl~W~~~~-~LVIG-W~d~v~i~  230 (846)
T KOG2066|consen  206 LFPPHLHWQDED-RLVIG-WGDSVKIC  230 (846)
T ss_pred             cCCCceEecCCC-eEEEe-cCCeEEEE
Confidence               335566543 44454 66677663

>KOG2041|consensus

Probab=98.61  E-value=3.2e-07  Score=73.76  Aligned_cols=154  Identities=15%  Similarity=0.146  Sum_probs=103.8

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---------------eeeEecCCCCCeeEEEEccCCcEEEEeeCCC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---------------CKQTFPGHESDINAVTFFPNGWAFATGSDDA   84 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---------------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~   84 (176)
                      .....|+.|.....+++.|+.||.+++..+.+..               ..+++.||.+.|.-+.|..+...|-++..+|
T Consensus        14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G   93 (1189)
T KOG2041|consen   14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG   93 (1189)
T ss_pred             CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence            3567899999999999999999999999875421               2357889999999999999999999999999


Q ss_pred             cEEEeeCCCCCeee-EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCCCE
Q psy15417         85 TCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMA  162 (176)
Q Consensus        85 ~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~  162 (176)
                      -|.+|=+-.++=.. .....+ ..-|-++.|+.+|..+....+||.+-|=.+...+... .+.+  .....+.|++|...
T Consensus        94 lIiVWmlykgsW~EEMiNnRn-KSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg--~~l~hv~ws~D~~~  170 (1189)
T KOG2041|consen   94 LIIVWMLYKGSWCEEMINNRN-KSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKG--QLLAHVLWSEDLEQ  170 (1189)
T ss_pred             eEEEEeeecccHHHHHhhCcC-ccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcch--heccceeecccHHH
Confidence            99999875443111 111111 1346688999999988887888877543332221111 0100  11224557777655


Q ss_pred             EEEccCCCcEEEeC
Q psy15417        163 VATGSWDSFLRIWN  176 (176)
Q Consensus       163 l~tg~~d~~v~vwd  176 (176)
                      +.-+-.+|.+.++|
T Consensus       171 ~Lf~~ange~hlyd  184 (1189)
T KOG2041|consen  171 ALFKKANGETHLYD  184 (1189)
T ss_pred             HHhhhcCCcEEEec
Confidence            55555556666554

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.58  E-value=3.7e-06  Score=71.50  Aligned_cols=151  Identities=16%  Similarity=0.228  Sum_probs=98.5

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC---------------C--------CeeeeEecC----------------
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIR---------------D--------GSCKQTFPG----------------   60 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~---------------~--------~~~~~~~~~----------------   60 (176)
                      ...|.+++||||+.+|+..+.++++.+-...               .        |+....|+|                
T Consensus       120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~  199 (928)
T PF04762_consen  120 DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVP  199 (928)
T ss_pred             cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCC
Confidence            5789999999999999999989888664311               0        111112221                


Q ss_pred             --------CCCCeeEEEEccCCcEEEEeeC---C---CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcC
Q psy15417         61 --------HESDINAVTFFPNGWAFATGSD---D---ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD  126 (176)
Q Consensus        61 --------h~~~v~~v~~~~~~~~l~s~s~---d---~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~  126 (176)
                              +...-..++|..||.+|+..+-   .   +.+|+|+ |.+......+....  --.+++|.|.|.++++...
T Consensus       200 ~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~-ReG~L~stSE~v~g--Le~~l~WrPsG~lIA~~q~  276 (928)
T PF04762_consen  200 KVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYS-REGELQSTSEPVDG--LEGALSWRPSGNLIASSQR  276 (928)
T ss_pred             ccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEEC-CCceEEeccccCCC--ccCCccCCCCCCEEEEEEE
Confidence                    1113346889999999988875   2   5699998 44544333321111  1136899999998887653


Q ss_pred             ---CCeEEEEeCCCceeeee----ecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        127 ---DFNCNVWDSMKTERAGI----LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       127 ---d~~i~v~d~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                         ...|.+|. +.|.....    .......+..++|++++..||..-.|. |.+|
T Consensus       277 ~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLW  330 (928)
T PF04762_consen  277 LPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLW  330 (928)
T ss_pred             cCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEE
Confidence               23466675 33333333    223456789999999999999877654 9998

>KOG2314|consensus

Probab=98.58  E-value=1.2e-06  Score=68.61  Aligned_cols=137  Identities=12%  Similarity=0.075  Sum_probs=95.9

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC-----------CcEEEeeCC
Q psy15417         24 MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD-----------ATCRLFDIR   92 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----------~~i~iwd~~   92 (176)
                      +-+.|||-|.+|+|-..-| |.+|--.+-..+..|. |++ |.-+.|+|.-++|++-|..           ..+.|||++
T Consensus       214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~  290 (698)
T KOG2314|consen  214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA  290 (698)
T ss_pred             eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence            4588999999999988666 8999766655555565 654 8999999999999987642           468999999


Q ss_pred             CCCeeeEEeecc-eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE
Q psy15417         93 ADQELAMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        93 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      ++...+.+.... ....-.-+.|+.|+.+++--..+ .|.||+..+..++-...-.-..|....|+|.++.||
T Consensus       291 tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llA  362 (698)
T KOG2314|consen  291 TGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLA  362 (698)
T ss_pred             ccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEecCceeeecccccCCccccCcccCCCcceEE
Confidence            998776665421 11112346799999998877665 588998665443332222234466667888777665

>KOG2315|consensus

Probab=98.57  E-value=2.4e-06  Score=66.74  Aligned_cols=110  Identities=20%  Similarity=0.354  Sum_probs=84.0

Q ss_pred             CccCeEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC---CcEEEeeCCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGA--CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD---ATCRLFDIRA   93 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d---~~i~iwd~~~   93 (176)
                      .+++|.++.|+|+++-++.+.  +--.+-++|++ ++.+..+.  +++=+.+-|+|.|++++-+|.+   |.+-+||..+
T Consensus       269 k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n  345 (566)
T KOG2315|consen  269 KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPN  345 (566)
T ss_pred             CCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccc
Confidence            479999999999998765544  45567899986 55565554  5677889999999999888875   6899999987


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCC------CeEEEEeC
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD------FNCNVWDS  135 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d------~~i~v~d~  135 (176)
                      -+.+..+.-.    ..+.+.|+|||.+++++++.      ..++||+.
T Consensus       346 ~K~i~~~~a~----~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy  389 (566)
T KOG2315|consen  346 RKLIAKFKAA----NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY  389 (566)
T ss_pred             hhhccccccC----CceEEEEcCCCcEEEEEeccccEEecCCeEEEEe
Confidence            6666554433    24568999999999998754      45778884

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.56  E-value=2.6e-05  Score=67.47  Aligned_cols=154  Identities=10%  Similarity=0.104  Sum_probs=100.4

Q ss_pred             CeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCeeeeEecCC-----------------CCCeeEEEEcc-CCcEEEEeeC
Q psy15417         22 DVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGH-----------------ESDINAVTFFP-NGWAFATGSD   82 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~h-----------------~~~v~~v~~~~-~~~~l~s~s~   82 (176)
                      .-..+++++++..|+.+.. +..|+.+|..++. +.++.+-                 -.....++|+| ++..+++.+.
T Consensus       625 ~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~  703 (1057)
T PLN02919        625 RPQGLAYNAKKNLLYVADTENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG  703 (1057)
T ss_pred             CCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC
Confidence            3467889888776655544 5678999987765 3333210                 01235799999 5777788888


Q ss_pred             CCcEEEeeCCCCCeeeEEee------c------ceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeeeec----
Q psy15417         83 DATCRLFDIRADQELAMYSH------D------NIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGILA----  145 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~~~~------~------~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~~~----  145 (176)
                      ++.|++||..++........      .      ........++++|++. ++++-..+++|++||..++.......    
T Consensus       704 ~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~  783 (1057)
T PLN02919        704 QHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPT  783 (1057)
T ss_pred             CCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccc
Confidence            89999999866533211100      0      0011245688999987 66677778999999987654221100    


Q ss_pred             ---------C--------CCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        146 ---------G--------HDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       146 ---------~--------~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                               .        ....-..+++.++|..+++-+.+++|++||
T Consensus       784 ~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD  831 (1057)
T PLN02919        784 FSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLD  831 (1057)
T ss_pred             cCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEE
Confidence                     0        011235788999998888989999999986

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.54  E-value=6.3e-07  Score=70.40  Aligned_cols=72  Identities=24%  Similarity=0.380  Sum_probs=61.4

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ....|.|++++|+...|+.|+.||.|.+||..++...  +....=.++.++|||+|..+++|+..|.+.+||+-
T Consensus       258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A  329 (545)
T PF11768_consen  258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA  329 (545)
T ss_pred             cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence            5678999999999999999999999999999876433  22334457889999999999999999999999963

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.50  E-value=9.8e-05  Score=55.14  Aligned_cols=153  Identities=18%  Similarity=0.207  Sum_probs=99.1

Q ss_pred             eEEEEEcCCCCEEEEEeCC-CeEEEEEcCCCeeeeEec---CCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCCCC-Ce
Q psy15417         23 VMSLSLAPDMRTFVSGACD-ASAKLWDIRDGSCKQTFP---GHESDINAVTFFPNGWAFATGS-DDATCRLFDIRAD-QE   96 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~d-g~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~-~~   96 (176)
                      +....|.|++++|+++.-- -.|.+|++..|++...-+   ......+.+.|+|+++...... .+++|.+|..... ..
T Consensus       147 ~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~  226 (346)
T COG2706         147 VHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGK  226 (346)
T ss_pred             cceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCce
Confidence            8889999999999888642 238899999876543221   2446689999999998765554 4789999987653 22


Q ss_pred             eeEEee-c------ceEeceEEEEECCCCcEEEEEcCC-CeEEEEeCCC--ce--eeeeecCCCccEEEEEEeCCCCEEE
Q psy15417         97 LAMYSH-D------NIICGITSVAFSRSGRLLLAGYDD-FNCNVWDSMK--TE--RAGILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        97 ~~~~~~-~------~~~~~v~~~~~~~~~~~l~~g~~d-~~i~v~d~~~--~~--~~~~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      +...+. .      ........|.++|+|++|.+.... ..|-+|.+..  ++  .......+...-+...|.+++.+|+
T Consensus       227 ~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Li  306 (346)
T COG2706         227 FEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLI  306 (346)
T ss_pred             EEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEE
Confidence            211111 0      011245688999999999886532 2566776443  22  2222233333346677889999987


Q ss_pred             EccCCC-cEEEe
Q psy15417        165 TGSWDS-FLRIW  175 (176)
Q Consensus       165 tg~~d~-~v~vw  175 (176)
                      ...+++ ++.+|
T Consensus       307 aa~q~sd~i~vf  318 (346)
T COG2706         307 AANQKSDNITVF  318 (346)
T ss_pred             EEccCCCcEEEE
Confidence            776654 56665

>KOG0309|consensus

Probab=98.50  E-value=4.9e-07  Score=72.87  Aligned_cols=153  Identities=20%  Similarity=0.341  Sum_probs=107.7

Q ss_pred             eEEEEEcCCC--CEEEEEeCCCeEEEEEcCCC---eeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         23 VMSLSLAPDM--RTFVSGACDASAKLWDIRDG---SCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        23 V~~~~~~~~~--~~l~s~s~dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      |-...|+|..  .+-++......-.+|++...   ..-..+.+|...++.+-|+|. ...+++++.|..+..||+++...
T Consensus        70 vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~  149 (1081)
T KOG0309|consen   70 VADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR  149 (1081)
T ss_pred             hcceecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCc
Confidence            4456676643  23333344555678887532   233456789999999999986 45799999999999999998754


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCC-CCEEEEccCCCcEEE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTED-GMAVATGSWDSFLRI  174 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~-~~~l~tg~~d~~v~v  174 (176)
                      . .+.........+.+.|+.-...+++.+....|++||...+ .++..+.+|...+..++|..- ...+.+++.|++|+.
T Consensus       150 p-~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkf  228 (1081)
T KOG0309|consen  150 P-FYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKF  228 (1081)
T ss_pred             c-eeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceee
Confidence            3 2222222234567888876666667677778999998764 567777778888888777532 345779999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       229 w~  230 (1081)
T KOG0309|consen  229 WD  230 (1081)
T ss_pred             ec
Confidence            97

>KOG1832|consensus

Probab=98.50  E-value=1.6e-07  Score=77.10  Aligned_cols=144  Identities=13%  Similarity=0.128  Sum_probs=104.0

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~   93 (176)
                      +..|....+|++|+.+..+|+.|+..|.|+++++.+|.....+..|.++|+.+.=+.+|....+.+.-.  -.-+|++.+
T Consensus      1097 frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s 1176 (1516)
T KOG1832|consen 1097 FRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS 1176 (1516)
T ss_pred             hhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccc
Confidence            456788899999999999999999999999999999998899999999999998888887666554433  467798864


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec----CCCccEEEEEEeCCCCEEE
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA----GHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~  164 (176)
                      -     +...+.-....++.|+.....-+.|.......+||++++.++.++.    +.+..-++..|+|....+.
T Consensus      1177 ~-----~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl 1246 (1516)
T KOG1832|consen 1177 T-----GGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL 1246 (1516)
T ss_pred             c-----cCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe
Confidence            1     1111111234567887665444556655678899998887655522    1122236677888876654

>KOG2114|consensus

Probab=98.46  E-value=1.1e-05  Score=66.04  Aligned_cols=138  Identities=13%  Similarity=0.207  Sum_probs=94.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCC-eeEEEEccCCcEEEEeeCCCc-----EEEeeCCC--
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPNGWAFATGSDDAT-----CRLFDIRA--   93 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~s~d~~-----i~iwd~~~--   93 (176)
                      .|.|  +++++..++.|+.+|.|.+++-. -+..+.|+.++.. |..+....+.+.|++.+.|..     +++|++..  
T Consensus        27 ~isc--~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~  103 (933)
T KOG2114|consen   27 AISC--CSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD  103 (933)
T ss_pred             ceeE--EcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence            4554  47889999999999999888743 3445788888777 666666666678888888754     89999853  


Q ss_pred             ----CCee---eEEeecce--EeceEEEEECCCCcEEEEEcCCCeEEEEe--CCC--ceeeeeecCCCccEEEEEEeCCC
Q psy15417         94 ----DQEL---AMYSHDNI--ICGITSVAFSRSGRLLLAGYDDFNCNVWD--SMK--TERAGILAGHDNRVSCLGVTEDG  160 (176)
Q Consensus        94 ----~~~~---~~~~~~~~--~~~v~~~~~~~~~~~l~~g~~d~~i~v~d--~~~--~~~~~~~~~~~~~i~~~~~~~~~  160 (176)
                          ++.+   +.++...+  ..++++++++.+-..+++|..+|.+..+.  +.+  +........-..+|+.+++..++
T Consensus       104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~  183 (933)
T KOG2114|consen  104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDG  183 (933)
T ss_pred             CCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCC
Confidence                2222   23332222  35678899999999999999999998874  211  22222222234679999998777


Q ss_pred             CE
Q psy15417        161 MA  162 (176)
Q Consensus       161 ~~  162 (176)
                      ..
T Consensus       184 ~s  185 (933)
T KOG2114|consen  184 KS  185 (933)
T ss_pred             ce
Confidence            65

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.45  E-value=8.9e-05  Score=55.36  Aligned_cols=159  Identities=15%  Similarity=0.142  Sum_probs=103.8

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCC---CeEEEEEcC--CCee--eeEecCCCCCeeEEEEccCCcEEEEeeCC-CcEE
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACD---ASAKLWDIR--DGSC--KQTFPGHESDINAVTFFPNGWAFATGSDD-ATCR   87 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~d---g~v~~wd~~--~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-~~i~   87 (176)
                      +..+.+...=+.|+|+++.|.++-.+   |.|.-|.++  +|++  +........+.+.+++++++..++++.-. +.|.
T Consensus        35 ~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~  114 (346)
T COG2706          35 LVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVS  114 (346)
T ss_pred             hccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEE
Confidence            44566777889999999999888776   557666554  4653  23333334455889999999998888765 6799


Q ss_pred             EeeCCCCCee----eEEeecce-------EeceEEEEECCCCcEEEEEc--CCCeEEEEeCCCceeeeeec---CCCccE
Q psy15417         88 LFDIRADQEL----AMYSHDNI-------ICGITSVAFSRSGRLLLAGY--DDFNCNVWDSMKTERAGILA---GHDNRV  151 (176)
Q Consensus        88 iwd~~~~~~~----~~~~~~~~-------~~~v~~~~~~~~~~~l~~g~--~d~~i~v~d~~~~~~~~~~~---~~~~~i  151 (176)
                      ++-++.+-.+    ....+...       ...+.+..+.|+++++++..  .| +|.+|++..+.....-+   .....-
T Consensus       115 v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~D-ri~~y~~~dg~L~~~~~~~v~~G~GP  193 (346)
T COG2706         115 VYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTD-RIFLYDLDDGKLTPADPAEVKPGAGP  193 (346)
T ss_pred             EEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCc-eEEEEEcccCccccccccccCCCCCc
Confidence            9888653211    11111111       11267888999999888764  34 58899987654322111   222334


Q ss_pred             EEEEEeCCCCEEE-EccCCCcEEEe
Q psy15417        152 SCLGVTEDGMAVA-TGSWDSFLRIW  175 (176)
Q Consensus       152 ~~~~~~~~~~~l~-tg~~d~~v~vw  175 (176)
                      +.++|+|++++.. .+--+++|-+|
T Consensus       194 RHi~FHpn~k~aY~v~EL~stV~v~  218 (346)
T COG2706         194 RHIVFHPNGKYAYLVNELNSTVDVL  218 (346)
T ss_pred             ceEEEcCCCcEEEEEeccCCEEEEE
Confidence            7899999998754 44457788777

>KOG4532|consensus

Probab=98.44  E-value=4.4e-05  Score=55.15  Aligned_cols=150  Identities=16%  Similarity=0.126  Sum_probs=97.7

Q ss_pred             CCccC--eEEEEEcCCCCEEEEEeCCCeEEEEEcCC-Ce-eeeEe-cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         18 GHTGD--VMSLSLAPDMRTFVSGACDASAKLWDIRD-GS-CKQTF-PGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        18 gh~~~--V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~-~~~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      -|...  +..+.++++++.+++.+....|..|.+.. ++ ..++. ..-+..=-+..|+.....|+++.+||++.|||+|
T Consensus       154 ~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR  233 (344)
T KOG4532|consen  154 VHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVR  233 (344)
T ss_pred             eeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEec
Confidence            35554  78899999999999999999999998864 22 23322 2233445678899999999999999999999998


Q ss_pred             CCCeeeEE---eecceEeceEEEEECCCCc--EEEEEcCCCeEEEEeCCCceeeeee-------cCCCc-cEEEEEEeCC
Q psy15417         93 ADQELAMY---SHDNIICGITSVAFSRSGR--LLLAGYDDFNCNVWDSMKTERAGIL-------AGHDN-RVSCLGVTED  159 (176)
Q Consensus        93 ~~~~~~~~---~~~~~~~~v~~~~~~~~~~--~l~~g~~d~~i~v~d~~~~~~~~~~-------~~~~~-~i~~~~~~~~  159 (176)
                      ........   ..+++...+-.+.|++-|.  +|+..-.=+.+++-|++..+....+       ..|.. .|....|..+
T Consensus       234 ~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~  313 (344)
T KOG4532|consen  234 NMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNE  313 (344)
T ss_pred             ccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCC
Confidence            76543221   2233445567788887553  4444434457889998776433322       22332 2666667666


Q ss_pred             CCEEEEcc
Q psy15417        160 GMAVATGS  167 (176)
Q Consensus       160 ~~~l~tg~  167 (176)
                      +..+.+.+
T Consensus       314 n~s~~v~~  321 (344)
T KOG4532|consen  314 NESNDVKN  321 (344)
T ss_pred             Cccccccc
Confidence            55443333

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.43  E-value=0.0002  Score=51.98  Aligned_cols=141  Identities=18%  Similarity=0.157  Sum_probs=92.5

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCC--------CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEee
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACD--------ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFD   90 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~d--------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd   90 (176)
                      ....+.+.+.++|.+.++-...        |.+..++.. ++...... .-...+.++|+|+++.|+ +-+..+.|..++
T Consensus        85 ~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~  162 (246)
T PF08450_consen   85 FNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADSFNGRIWRFD  162 (246)
T ss_dssp             TEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEETTTTEEEEEE
T ss_pred             cCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchheeecccccceeEEEe
Confidence            4567889999999977776654        457777776 55433332 234578999999998665 666778888888


Q ss_pred             CCCCCe-e---eEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe-CCCCEE
Q psy15417         91 IRADQE-L---AMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT-EDGMAV  163 (176)
Q Consensus        91 ~~~~~~-~---~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l  163 (176)
                      +..... +   ..+ .........-.+++.++|++.++....+.|.++|.. ++.+..+.-....+++++|. ++.+.|
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L  240 (246)
T PF08450_consen  163 LDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTL  240 (246)
T ss_dssp             EETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEE
T ss_pred             ccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEE
Confidence            754322 2   112 122111124568899999999998889999999965 87777666555578899994 554443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.40  E-value=0.00013  Score=55.71  Aligned_cols=151  Identities=15%  Similarity=0.139  Sum_probs=95.1

Q ss_pred             EEEEEcCCCCEEEEEeC--CCeEEEEEcCCCeeeeEecCCC-------------------------------CCeeEEE-
Q psy15417         24 MSLSLAPDMRTFVSGAC--DASAKLWDIRDGSCKQTFPGHE-------------------------------SDINAVT-   69 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~~h~-------------------------------~~v~~v~-   69 (176)
                      ..++++|||++|+....  +..|-+.|+.+++.+.++.-..                               ..+.... 
T Consensus       108 ~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~v  187 (352)
T TIGR02658       108 WMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEV  187 (352)
T ss_pred             ceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeee
Confidence            36788999998887763  5779999998876555433100                               0011111 


Q ss_pred             -------------Ecc-CCcEEEEeeCCCcEEEeeCCCCCe-----eeEEeec-----ceEeceEEEEECCCCcEEEEEc
Q psy15417         70 -------------FFP-NGWAFATGSDDATCRLFDIRADQE-----LAMYSHD-----NIICGITSVAFSRSGRLLLAGY  125 (176)
Q Consensus        70 -------------~~~-~~~~l~s~s~d~~i~iwd~~~~~~-----~~~~~~~-----~~~~~v~~~~~~~~~~~l~~g~  125 (176)
                                   |.+ +++.++.... |+|.+-|+.....     +......     -...+.+-++++|++..++...
T Consensus       188 f~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~  266 (352)
T TIGR02658       188 FHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLA  266 (352)
T ss_pred             ecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEe
Confidence                         123 5666666655 8888888543321     1111111     0122345599999988776632


Q ss_pred             ----------CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEcc-CCCcEEEeC
Q psy15417        126 ----------DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGS-WDSFLRIWN  176 (176)
Q Consensus       126 ----------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~-~d~~v~vwd  176 (176)
                                ....+.++|..+++.+..+.- ......++++|+++ .|.+.. .++.|.++|
T Consensus       267 ~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD  328 (352)
T TIGR02658       267 DQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFD  328 (352)
T ss_pred             cCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEE
Confidence                      224799999999988887763 34678899999998 665443 567788775

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.40  E-value=0.00015  Score=56.87  Aligned_cols=140  Identities=9%  Similarity=-0.031  Sum_probs=84.2

Q ss_pred             CeEEEEEcCCCCE-EEEEeCC---CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCC--cEEEeeCCCC
Q psy15417         22 DVMSLSLAPDMRT-FVSGACD---ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDA--TCRLFDIRAD   94 (176)
Q Consensus        22 ~V~~~~~~~~~~~-l~s~s~d---g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~--~i~iwd~~~~   94 (176)
                      .+....|+||++. ++..+.+   ..|.++|+.+++...... ..+.+....|+|||+.+ ++.+.++  .|.++|+.++
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g  267 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK  267 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            5678999999984 5543433   458889998886544333 44556678899999755 4555454  4666677665


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEc-CCC--eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDF--NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      +.........   ....-.|+|||+.++-.+ ..+  .|.+.|+..++....... ...  ...|+|+|..|+-.+.
T Consensus       268 ~~~~LT~~~~---~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~--~~~~SPDG~~Ia~~~~  338 (419)
T PRK04043        268 TLTQITNYPG---IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKN--NSSVSTYKNYIVYSSR  338 (419)
T ss_pred             cEEEcccCCC---ccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCc--CceECCCCCEEEEEEc
Confidence            4332222221   112346999997554433 333  577778776654332211 111  2379999998876554

>KOG2066|consensus

Probab=98.40  E-value=5.4e-06  Score=67.37  Aligned_cols=140  Identities=16%  Similarity=0.185  Sum_probs=97.2

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      ...++|++++  ++.|+-|+.+|.|.+++.+-.-  .+...|...      ..+|.+++|||.||++.|-.+-+++....
T Consensus        39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~  108 (846)
T KOG2066|consen   39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGNP--KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQ  108 (846)
T ss_pred             hhHHHHHHhh--cceeeeccccceEEEEecCCcc--ccccccccc------ccCCceEEEecCCCcEEEeeccCCcccee
Confidence            3455666665  6789999999999999986432  334445433      55799999999999999998888777666


Q ss_pred             EeecceEeceEEEEECCC-----CcEEEEEcCCCeEEEEeCC--CceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417        100 YSHDNIICGITSVAFSRS-----GRLLLAGYDDFNCNVWDSM--KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~-----~~~l~~g~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      +.+.   .++.+++++|+     ...+++|+.-| +.++.-.  ..+.........+.|.++.|.  |++||=++++ -|
T Consensus       109 ~df~---rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~-Gv  181 (846)
T KOG2066|consen  109 YDFK---RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDD-GV  181 (846)
T ss_pred             EecC---CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCC-Cc
Confidence            5554   35778999998     35788888777 6565411  111112344456789998885  6688777655 46


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      +|||
T Consensus       182 ~vyd  185 (846)
T KOG2066|consen  182 KVYD  185 (846)
T ss_pred             EEEe
Confidence            6665

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.39  E-value=2.4e-05  Score=60.33  Aligned_cols=134  Identities=13%  Similarity=0.048  Sum_probs=89.1

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe-ecceEeceE
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGIT  110 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~~~~v~  110 (176)
                      +..++.++.+|.+..||.++++.+.......  .....  ..+..++.++.++.+..+|..+++.+.... ....  ...
T Consensus       241 ~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~--~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~--~~s  314 (377)
T TIGR03300       241 GGQVYAVSYQGRVAALDLRSGRVLWKRDASS--YQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYR--QLT  314 (377)
T ss_pred             CCEEEEEEcCCEEEEEECCCCcEEEeeccCC--ccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCC--ccc
Confidence            4567778889999999999998777665211  11111  245677788899999999998877654331 1111  111


Q ss_pred             EEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEE-EEEeCCCCEEEEccCCCcEEEe
Q psy15417        111 SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC-LGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       111 ~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      +...  .+..++++..+|.++++|..+++.+.....+...+.. .++. ++ .|..++.||.|..|
T Consensus       315 sp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~~-~l~v~~~dG~l~~~  376 (377)
T TIGR03300       315 APAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-GD-GLLVQTRDGDLYAF  376 (377)
T ss_pred             cCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-CC-EEEEEeCCceEEEe
Confidence            1111  3467888899999999999889888877755543322 2333 33 56788899998876

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.36  E-value=0.0001  Score=57.80  Aligned_cols=141  Identities=9%  Similarity=0.034  Sum_probs=82.4

Q ss_pred             ccCeEEEEEcCCCCEEE-EEeCC--CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-CCC--cEEEeeCCC
Q psy15417         20 TGDVMSLSLAPDMRTFV-SGACD--ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-DDA--TCRLFDIRA   93 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~-s~s~d--g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~--~i~iwd~~~   93 (176)
                      .+.+....|+|||+.++ +.+.+  ..+.++|+.+++.. .+..+........|+|||+.++-.+ ..+  .|.+.|+.+
T Consensus       232 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~  310 (419)
T PRK04043        232 QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNS  310 (419)
T ss_pred             CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            44556788999997554 44434  45777788877643 3443333334567999997554444 444  466667766


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCC---------CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---------FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d---------~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      ++..... ....    ....|+|+|+.++.....         ..|.+.|+..++... +... .......|+|||..|+
T Consensus       311 g~~~rlt-~~g~----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~-LT~~-~~~~~p~~SPDG~~I~  383 (419)
T PRK04043        311 GSVEQVV-FHGK----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRR-LTAN-GVNQFPRFSSDGGSIM  383 (419)
T ss_pred             CCeEeCc-cCCC----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEE-CCCC-CCcCCeEECCCCCEEE
Confidence            5442221 1111    124799999977554432         367888877665322 2221 1223467999998776


Q ss_pred             EccC
Q psy15417        165 TGSW  168 (176)
Q Consensus       165 tg~~  168 (176)
                      -.+.
T Consensus       384 f~~~  387 (419)
T PRK04043        384 FIKY  387 (419)
T ss_pred             EEEc
Confidence            4443

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.35  E-value=0.00018  Score=54.91  Aligned_cols=103  Identities=15%  Similarity=-0.001  Sum_probs=76.7

Q ss_pred             CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC----------CCcEEEeeCCCCCeeeEEeecce-----E
Q psy15417         42 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD----------DATCRLFDIRADQELAMYSHDNI-----I  106 (176)
Q Consensus        42 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~----------d~~i~iwd~~~~~~~~~~~~~~~-----~  106 (176)
                      ++|.+.|..+.+.+.++..-..+ ..+ ++|+++.++.+..          +..|.+||..+.+.+........     .
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~  104 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG  104 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence            78999999999988888754333 334 9999887666654          78999999998887765553221     1


Q ss_pred             eceEEEEECCCCcEEEEEc-C-CCeEEEEeCCCceeeeeecC
Q psy15417        107 CGITSVAFSRSGRLLLAGY-D-DFNCNVWDSMKTERAGILAG  146 (176)
Q Consensus       107 ~~v~~~~~~~~~~~l~~g~-~-d~~i~v~d~~~~~~~~~~~~  146 (176)
                      .....++++|||+++++.. . +..+.+.|+.+++.+.++.-
T Consensus       105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v  146 (352)
T TIGR02658       105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV  146 (352)
T ss_pred             CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC
Confidence            1223688999999888765 4 67899999999988887653

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.34  E-value=1.2e-05  Score=63.41  Aligned_cols=109  Identities=12%  Similarity=0.188  Sum_probs=75.8

Q ss_pred             eEEEEEcC-CCCEEEEE----eCCCeE----EEEEcCCCeee----eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         23 VMSLSLAP-DMRTFVSG----ACDASA----KLWDIRDGSCK----QTFPGHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        23 V~~~~~~~-~~~~l~s~----s~dg~v----~~wd~~~~~~~----~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      ..++.|+. +...+.+-    +.+|.+    .+|+...++..    ..++ .++.|.+++++|+...++.|..||+|.+|
T Consensus       208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsip-L~s~v~~ca~sp~E~kLvlGC~DgSiiLy  286 (545)
T PF11768_consen  208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIP-LPSQVICCARSPSEDKLVLGCEDGSIILY  286 (545)
T ss_pred             cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEe-cCCcceEEecCcccceEEEEecCCeEEEE
Confidence            35667765 33333322    223433    46776555422    2333 56789999999999999999999999999


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                      |...+..... ..   ....+.++|||+|.++++|+..|.+.+||+.
T Consensus       287 D~~~~~t~~~-ka---~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A  329 (545)
T PF11768_consen  287 DTTRGVTLLA-KA---EFIPTLIAWHPDGAIFVVGSEQGELQCFDMA  329 (545)
T ss_pred             EcCCCeeeee-ee---cccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence            9876533221 11   1235679999999999999999999999954

>KOG0882|consensus

Probab=98.29  E-value=6.4e-06  Score=63.10  Aligned_cols=160  Identities=14%  Similarity=0.088  Sum_probs=106.7

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCeeeeEecCCCCCeeEEEE-ccCC----cEEEEeeCCCcEEEe
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDINAVTF-FPNG----WAFATGSDDATCRLF   89 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~-~~~~----~~l~s~s~d~~i~iw   89 (176)
                      +..|-+.|..++.+-++.++.|.+. |..++++|+.+-..+.-++-..- ...+.| ...|    ..-++.-.++.+.++
T Consensus        49 FraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~l-Pg~a~wv~skGd~~s~IAVs~~~sg~i~Vv  127 (558)
T KOG0882|consen   49 FRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDL-PGFAEWVTSKGDKISLIAVSLFKSGKIFVV  127 (558)
T ss_pred             hHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccC-CCceEEecCCCCeeeeEEeecccCCCcEEE
Confidence            3468888899999999999999777 99999999987654432222111 111222 2222    233344456889999


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC------ceee---------eeecCCCccEEEE
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK------TERA---------GILAGHDNRVSCL  154 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~------~~~~---------~~~~~~~~~i~~~  154 (176)
                      |-+.+.....+-...+..+|..+.+.+.+..+++....|.|.-|..+.      .+..         ..++.......++
T Consensus       128 D~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~  207 (558)
T KOG0882|consen  128 DGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSF  207 (558)
T ss_pred             CCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccce
Confidence            976544222222222335788888999999999999999999998763      1110         1112223345788


Q ss_pred             EEeCCCCEEEEccCCCcEEEeC
Q psy15417        155 GVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       155 ~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .|+|++..+++-+.|..||+++
T Consensus       208 Efsp~g~qistl~~DrkVR~F~  229 (558)
T KOG0882|consen  208 EFSPDGAQISTLNPDRKVRGFV  229 (558)
T ss_pred             EEccccCcccccCcccEEEEEE
Confidence            9999999999999999999874

>KOG4190|consensus

Probab=98.29  E-value=1.9e-06  Score=67.75  Aligned_cols=157  Identities=18%  Similarity=0.210  Sum_probs=103.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--CCCCeeEEEEccC--CcEEEEe-eCCCcEEEe
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--HESDINAVTFFPN--GWAFATG-SDDATCRLF   89 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~--~~~l~s~-s~d~~i~iw   89 (176)
                      ..+.|..+|..+.|-.+.++++++  ||-+.+||.=-++....+..  ..+.+..+...|+  ...++.+ +...+++++
T Consensus       779 TY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~  856 (1034)
T KOG4190|consen  779 TYQAHKKPIHDIGFLADLRSIASC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLF  856 (1034)
T ss_pred             EhhhccCcccceeeeeccceeeec--cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheee
Confidence            356799999999999888887766  89999999877765543321  2244555555554  3344444 778899999


Q ss_pred             eCCCCCeeeEEeec---ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         90 DIRADQELAMYSHD---NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      |.++.+-.-.+..-   ....-+-++++.|.|+.++++-.+|.|.+.|.++++.+..-....-....++ .|....++..
T Consensus       857 DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~s  935 (1034)
T KOG4190|consen  857 DARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQS  935 (1034)
T ss_pred             ecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhh
Confidence            99987543333221   1112356788999999999999999999999888876654433222222222 2344455666


Q ss_pred             cCCCcEEE
Q psy15417        167 SWDSFLRI  174 (176)
Q Consensus       167 ~~d~~v~v  174 (176)
                      ..|+++.|
T Consensus       936 aldHslaV  943 (1034)
T KOG4190|consen  936 ALDHSLAV  943 (1034)
T ss_pred             cccceeEe
Confidence            66666665

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.28  E-value=0.00041  Score=51.55  Aligned_cols=149  Identities=16%  Similarity=0.254  Sum_probs=94.9

Q ss_pred             EEEcCCCCEEEEEeCC-----CeEEEEEcC-CCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-------CCcEEE----
Q psy15417         26 LSLAPDMRTFVSGACD-----ASAKLWDIR-DGSCKQTFPGHESDINAVTFFPNGWAFATGSD-------DATCRL----   88 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~d-----g~v~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-------d~~i~i----   88 (176)
                      -.||+||++|++.-.|     |.|-+||.. +.+.+.+|..|.-..=.+.+.|++..|+.+.-       .|..++    
T Consensus        56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~t  135 (305)
T PF07433_consen   56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDT  135 (305)
T ss_pred             EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhh
Confidence            5689999999987654     778999998 66778888877655556789999966655521       122232    


Q ss_pred             -------eeCCCCCeeeEEee--cceEeceEEEEECCCCcEEEEEcCCCe-------EEEEeCCCceeeeee-------c
Q psy15417         89 -------FDIRADQELAMYSH--DNIICGITSVAFSRSGRLLLAGYDDFN-------CNVWDSMKTERAGIL-------A  145 (176)
Q Consensus        89 -------wd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~g~~d~~-------i~v~d~~~~~~~~~~-------~  145 (176)
                             -|.++++.+.....  ..+..++--+++.++|..++.....+.       +.+++  .++.+..+       .
T Consensus       136 M~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~  213 (305)
T PF07433_consen  136 MQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWR  213 (305)
T ss_pred             cCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHH
Confidence                   23344444444333  223345667788888888777654442       23333  22222222       1


Q ss_pred             CCCccEEEEEEeCCCCEE-EEccCCCcEEEeC
Q psy15417        146 GHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN  176 (176)
Q Consensus       146 ~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vwd  176 (176)
                      ...+.+-++++++++..+ +|+=..+.+.+||
T Consensus       214 ~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d  245 (305)
T PF07433_consen  214 RLNGYIGSIAADRDGRLIAVTSPRGGRVAVWD  245 (305)
T ss_pred             hhCCceEEEEEeCCCCEEEEECCCCCEEEEEE
Confidence            234678899999998776 5666677888885

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.28  E-value=0.00034  Score=54.42  Aligned_cols=140  Identities=12%  Similarity=0.109  Sum_probs=104.5

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC-cEEEeeCCCCCeeeEEeecceEece
Q psy15417         31 DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA-TCRLFDIRADQELAMYSHDNIICGI  109 (176)
Q Consensus        31 ~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-~i~iwd~~~~~~~~~~~~~~~~~~v  109 (176)
                      +|.+++..| -|...+.+...+-.+ .+ +|.+.|.-..+..+++.++.|..|| .+-++|.++++....   +.....|
T Consensus       331 ~Gd~ia~VS-RGkaFi~~~~~~~~i-qv-~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~---e~~lg~I  404 (668)
T COG4946         331 NGDYIALVS-RGKAFIMRPWDGYSI-QV-GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRI---EKDLGNI  404 (668)
T ss_pred             CCcEEEEEe-cCcEEEECCCCCeeE-Ec-CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEe---eCCccce
Confidence            577777777 456766665544322 22 3667798888888888999999999 899999887653322   1222457


Q ss_pred             EEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC----cEEEeC
Q psy15417        110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS----FLRIWN  176 (176)
Q Consensus       110 ~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~----~v~vwd  176 (176)
                      -++..+|+|..++++.....+-+.|+.++.....-....+-|...+|+|++.++|-+--+|    .|+++|
T Consensus       405 ~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklyd  475 (668)
T COG4946         405 EAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYD  475 (668)
T ss_pred             EEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEe
Confidence            7899999999999999999999999998876655555667799999999999998775554    567664

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.22  E-value=0.00014  Score=62.17  Aligned_cols=152  Identities=11%  Similarity=0.154  Sum_probs=96.2

Q ss_pred             CccCeEEEEEcCCCCEEEEEeC---C---CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC---CCcEEEe
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGAC---D---ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD---DATCRLF   89 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~---d---g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~---d~~i~iw   89 (176)
                      +...-..++|-.||.+|++.+.   .   +.+++|+-+ |++..+-..-.+--.+++|.|+|+++++...   ...|-+|
T Consensus       208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFf  286 (928)
T PF04762_consen  208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFF  286 (928)
T ss_pred             cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEE
Confidence            4445567999999999998886   2   468899865 6655444433333456899999999998876   2345556


Q ss_pred             eCCCCCeeeEEeec--ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee----eeeecCCCccEEEEEEeCCC-CE
Q psy15417         90 DIRADQELAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER----AGILAGHDNRVSCLGVTEDG-MA  162 (176)
Q Consensus        90 d~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~----~~~~~~~~~~i~~~~~~~~~-~~  162 (176)
                      + |.+..-..|..+  .....+..+.|++++.+|+....|. +.+|......-    ...+.. ...+..+.|+|.. ..
T Consensus       287 E-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~-~~~~~~~~Wdpe~p~~  363 (928)
T PF04762_consen  287 E-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSS-SESVNFVKWDPEKPLR  363 (928)
T ss_pred             e-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccC-CCCCCceEECCCCCCE
Confidence            5 343333333322  2234678899999999999977665 99998665532    222222 2233447788753 33


Q ss_pred             EEEccCCCcEEE
Q psy15417        163 VATGSWDSFLRI  174 (176)
Q Consensus       163 l~tg~~d~~v~v  174 (176)
                      |...+.++.+..
T Consensus       364 L~v~t~~g~~~~  375 (928)
T PF04762_consen  364 LHVLTSNGQYEI  375 (928)
T ss_pred             EEEEecCCcEEE
Confidence            555555455433

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.22  E-value=0.00085  Score=48.69  Aligned_cols=144  Identities=13%  Similarity=0.097  Sum_probs=89.9

Q ss_pred             EEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEc-cCCcEEEEeeCCCcEEEeeCCCCCeeeEEee
Q psy15417         25 SLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF-PNGWAFATGSDDATCRLFDIRADQELAMYSH  102 (176)
Q Consensus        25 ~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~  102 (176)
                      +..|.+ ++.++.+--..+.|..|+..+++... +....  ..++++. +++..+++ ... .+.++|..+++.......
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~-~~~-~~~~~d~~~g~~~~~~~~   78 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVA-DSG-GIAVVDPDTGKVTVLADL   78 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEE-ETT-CEEEEETTTTEEEEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEE-EcC-ceEEEecCCCcEEEEeec
Confidence            567887 66777777778999999998876433 33222  6777887 66655554 443 445558877654433332


Q ss_pred             --cc-eEeceEEEEECCCCcEEEEEcCC--------CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE-EccCCC
Q psy15417        103 --DN-IICGITSVAFSRSGRLLLAGYDD--------FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA-TGSWDS  170 (176)
Q Consensus       103 --~~-~~~~v~~~~~~~~~~~l~~g~~d--------~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-tg~~d~  170 (176)
                        .. .....+.+++.|+|++.++....        +.+..++.. ++..... ..-...+.++|+|+++.|. +-+..+
T Consensus        79 ~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~-~~~~~pNGi~~s~dg~~lyv~ds~~~  156 (246)
T PF08450_consen   79 PDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA-DGLGFPNGIAFSPDGKTLYVADSFNG  156 (246)
T ss_dssp             ETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE-EEESSEEEEEEETTSSEEEEEETTTT
T ss_pred             cCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe-cCcccccceEECCcchheeecccccc
Confidence              11 23567899999999988775533        457677755 3332222 2234457899999998654 556666


Q ss_pred             cEEEe
Q psy15417        171 FLRIW  175 (176)
Q Consensus       171 ~v~vw  175 (176)
                      .|..|
T Consensus       157 ~i~~~  161 (246)
T PF08450_consen  157 RIWRF  161 (246)
T ss_dssp             EEEEE
T ss_pred             eeEEE
Confidence            66554

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG1912|consensus

Probab=98.18  E-value=9.5e-05  Score=60.46  Aligned_cols=132  Identities=17%  Similarity=0.207  Sum_probs=95.0

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC------------cEEEEeeCCCcEEEee
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG------------WAFATGSDDATCRLFD   90 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~------------~~l~s~s~d~~i~iwd   90 (176)
                      -.+++|+|.| +++-|+ ...|.+-|..+.+.+..+..|+..|+.+.|.|..            -.++++...|.|-+||
T Consensus        18 ~~A~Dw~~~G-LiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d   95 (1062)
T KOG1912|consen   18 RNAADWSPSG-LIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVD   95 (1062)
T ss_pred             ccccccCccc-eEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEE
Confidence            5678998876 334443 5579999999999999999999999999998742            2367777789999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEE---CCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC
Q psy15417         91 IRADQELAMYSHDNIICGITSVAF---SRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE  158 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~---~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~  158 (176)
                      ......+..+++..  .+++.+.|   .++. .+|++.....++.+|+..+++.......-.....|+.+.|
T Consensus        96 ~~~~s~~~~l~~~~--~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DP  165 (1062)
T KOG1912|consen   96 FVLASVINWLSHSN--DSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDP  165 (1062)
T ss_pred             ehhhhhhhhhcCCC--cchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCC
Confidence            87654433333222  23444444   3344 5677777888999999999988887766556667777665

>KOG1912|consensus

Probab=98.18  E-value=5.5e-05  Score=61.78  Aligned_cols=86  Identities=14%  Similarity=0.125  Sum_probs=68.0

Q ss_pred             CCcccCCCccCeEEEEEcCC------------CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC---C-c
Q psy15417         12 GSPAASGHTGDVMSLSLAPD------------MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN---G-W   75 (176)
Q Consensus        12 ~~~~~~gh~~~V~~~~~~~~------------~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~---~-~   75 (176)
                      ...+++-|...|+.+.|.|-            ..+++++...|.|.+||+..+..+..+..|..++..++|-+.   . .
T Consensus        47 ~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd  126 (1062)
T KOG1912|consen   47 LIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRD  126 (1062)
T ss_pred             hhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchh
Confidence            33455668999999999873            125778888899999999999888899999999999999863   2 4


Q ss_pred             EEEEeeCCCcEEEeeCCCCCee
Q psy15417         76 AFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        76 ~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      .|+.-....++.+||..+++..
T Consensus       127 ~LlaIh~ss~lvLwntdtG~k~  148 (1062)
T KOG1912|consen  127 VLLAIHGSSTLVLWNTDTGEKF  148 (1062)
T ss_pred             eeEEecCCcEEEEEEccCCcee
Confidence            5666667788999988776544

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.17  E-value=3.3e-05  Score=56.96  Aligned_cols=156  Identities=21%  Similarity=0.365  Sum_probs=103.5

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eeeEecCCC-----CCeeEEEEccC-CcEEEEeeCCCcEE
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTFPGHE-----SDINAVTFFPN-GWAFATGSDDATCR   87 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~-----~~v~~v~~~~~-~~~l~s~s~d~~i~   87 (176)
                      -.|.-.++++.|..|...++++. |=.|.+|++.-..   -+..++.|.     .-+++..|+|. .+.+.-++..|.|+
T Consensus       169 NaH~yhiNSiS~NsD~et~lSaD-dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ik  247 (460)
T COG5170         169 NAHPYHINSISFNSDKETLLSAD-DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIK  247 (460)
T ss_pred             ccceeEeeeeeecCchheeeecc-ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence            46888899999999999998876 5568999986432   233444443     45788999997 55677777789999


Q ss_pred             EeeCCCCCee----eEEe----------ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC-ceeeeeecCC-----
Q psy15417         88 LFDIRADQEL----AMYS----------HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK-TERAGILAGH-----  147 (176)
Q Consensus        88 iwd~~~~~~~----~~~~----------~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~-----  147 (176)
                      +-|+|.....    ..++          +......|+.+.|+++|+++++-..- ++++||..- ..++.+++-|     
T Consensus       248 l~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl-tvkiwDvnm~k~pikTi~~h~~l~~  326 (460)
T COG5170         248 LNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL-TVKIWDVNMAKNPIKTIPMHCDLMD  326 (460)
T ss_pred             ehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc-eEEEEecccccCCceeechHHHHHH
Confidence            9999843210    1111          11223467889999999998886543 799999643 3445554333     


Q ss_pred             -------CccE---EEEEEeCCCCEEEEccCCCcEEE
Q psy15417        148 -------DNRV---SCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       148 -------~~~i---~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                             +..|   ..+.|+-+...+.+|+.....-+
T Consensus       327 ~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgi  363 (460)
T COG5170         327 ELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGI  363 (460)
T ss_pred             HHHhhhhccceeeeEEEEecCCcccccccccccceee
Confidence                   1122   34567777777778877655443

>smart00320 WD40 WD40 repeats

Probab=98.16  E-value=9.7e-06  Score=39.92  Aligned_cols=39  Identities=38%  Similarity=0.678  Sum_probs=34.2

Q ss_pred             CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         52 GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        52 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      +++...+..|...|.+++|.+.+..+++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            345667778889999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>smart00320 WD40 WD40 repeats

Probab=98.15  E-value=1.1e-05  Score=39.70  Aligned_cols=37  Identities=27%  Similarity=0.519  Sum_probs=32.0

Q ss_pred             eeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        140 RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +...+..|...+.++.|.+++..+++++.|+.+++||
T Consensus         4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            4455567888899999999989999999999999997

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4640|consensus

Probab=98.14  E-value=2.3e-05  Score=62.30  Aligned_cols=93  Identities=16%  Similarity=0.257  Sum_probs=75.4

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCee-EEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDIN-AVTFFPNGWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~-~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      ..|.-+.|+|.-.++|.+..+|.+.+..++ -..+.+++-|..+|+ +++|.|||+.++.|-.||+|++-|+.++..+..
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~   99 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS   99 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence            456778999999999999999999999988 667889998888888 999999999999999999999999988766544


Q ss_pred             EeecceEeceEEEEEC
Q psy15417        100 YSHDNIICGITSVAFS  115 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~  115 (176)
                      +... ....+.++.|.
T Consensus       100 ~~~s-~e~~is~~~w~  114 (665)
T KOG4640|consen  100 FLFS-VETDISKGIWD  114 (665)
T ss_pred             cccc-cccchheeecc
Confidence            2111 11345556664

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.14  E-value=0.00049  Score=53.11  Aligned_cols=108  Identities=14%  Similarity=0.081  Sum_probs=73.6

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEE
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS  111 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~  111 (176)
                      +..++.++.++.+..+|..+|+.++.+............  ++..++.++.++.+..+|..+++.+..........  ..
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~--~~  140 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVL--SP  140 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceee--cC
Confidence            567888888999999999999988877654322222222  45678888889999999998887765443332211  11


Q ss_pred             EEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec
Q psy15417        112 VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA  145 (176)
Q Consensus       112 ~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~  145 (176)
                      ..+  .+..++.+..++.+..+|.++++......
T Consensus       141 p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~  172 (377)
T TIGR03300       141 PLV--ANGLVVVRTNDGRLTALDAATGERLWTYS  172 (377)
T ss_pred             CEE--ECCEEEEECCCCeEEEEEcCCCceeeEEc
Confidence            111  23456667789999999988887766554

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1645|consensus

Probab=98.10  E-value=1.4e-05  Score=60.43  Aligned_cols=82  Identities=12%  Similarity=0.192  Sum_probs=70.3

Q ss_pred             CcccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEee
Q psy15417         13 SPAASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFD   90 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd   90 (176)
                      ...+.+|...|..++|+|... ++..++-+.++++.|+++..+...+..+ .++.+++|.-+ .++++.|...|.|.++|
T Consensus       186 sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD  264 (463)
T KOG1645|consen  186 SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYD  264 (463)
T ss_pred             hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEE
Confidence            345678888999999999766 7889999999999999999888888877 78999999876 56788888899999999


Q ss_pred             CCCCC
Q psy15417         91 IRADQ   95 (176)
Q Consensus        91 ~~~~~   95 (176)
                      ++..+
T Consensus       265 ~R~~~  269 (463)
T KOG1645|consen  265 MRQPE  269 (463)
T ss_pred             ccCCC
Confidence            98654

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.10  E-value=0.0014  Score=46.92  Aligned_cols=139  Identities=17%  Similarity=0.104  Sum_probs=85.0

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEe-cCCC--CC-eeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceE-
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTF-PGHE--SD-INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII-  106 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~-~~h~--~~-v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~-  106 (176)
                      +..++.++.++.+..+|..+|+.++.. ....  .. .........+..++.+..++.+..+|+++++.+..+...... 
T Consensus        76 ~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~  155 (238)
T PF13360_consen   76 GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRG  155 (238)
T ss_dssp             TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-S
T ss_pred             ccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCC
Confidence            445666667889999999999988874 4321  11 122223334778888888999999999999877655442211 


Q ss_pred             -e------ce-EEEEECCCCcEEEEEcCCCe-EEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        107 -C------GI-TSVAFSRSGRLLLAGYDDFN-CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       107 -~------~v-~~~~~~~~~~~l~~g~~d~~-i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                       .      .. ....+. ++ .++.+..++. +.+ |..+++......  ......+ ....+..|+.++.++.+..||
T Consensus       156 ~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~~~~~~-~~~~~~~l~~~~~~~~l~~~d  228 (238)
T PF13360_consen  156 SSPISSFSDINGSPVIS-DG-RVYVSSGDGRVVAV-DLATGEKLWSKP--ISGIYSL-PSVDGGTLYVTSSDGRLYALD  228 (238)
T ss_dssp             S--EEEETTEEEEEECC-TT-EEEEECCTSSEEEE-ETTTTEEEEEEC--SS-ECEC-EECCCTEEEEEETTTEEEEEE
T ss_pred             CcceeeecccccceEEE-CC-EEEEEcCCCeEEEE-ECCCCCEEEEec--CCCccCC-ceeeCCEEEEEeCCCEEEEEE
Confidence             0      11 222333 45 5555556664 666 999888665333  2222221 345667777777889998875

...

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.10  E-value=0.00041  Score=49.76  Aligned_cols=114  Identities=16%  Similarity=0.089  Sum_probs=76.1

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE-eecc--eE
Q psy15417         30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDN--II  106 (176)
Q Consensus        30 ~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~~~--~~  106 (176)
                      +++..+++++.++.+..||..+|+.+..+.. ..++.... ...+..++.+..++.+..+|.++++.+... ....  ..
T Consensus        34 ~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~  111 (238)
T PF13360_consen   34 PDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG  111 (238)
T ss_dssp             EETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS
T ss_pred             EeCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeeccccccccc
Confidence            3567777888999999999999998887775 22222222 223455666668889999999988876552 2211  00


Q ss_pred             -eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC
Q psy15417        107 -CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH  147 (176)
Q Consensus       107 -~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~  147 (176)
                       .......+  .+..++++..++.+..+|.++++.+......
T Consensus       112 ~~~~~~~~~--~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~  151 (238)
T PF13360_consen  112 VRSSSSPAV--DGDRLYVGTSSGKLVALDPKTGKLLWKYPVG  151 (238)
T ss_dssp             TB--SEEEE--ETTEEEEEETCSEEEEEETTTTEEEEEEESS
T ss_pred             cccccCceE--ecCEEEEEeccCcEEEEecCCCcEEEEeecC
Confidence             01112222  3677788888999999999999887766543

...

>KOG0882|consensus

Probab=98.10  E-value=2.3e-05  Score=60.21  Aligned_cols=156  Identities=15%  Similarity=0.228  Sum_probs=107.4

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--C-eeeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeCCCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD--G-SCKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDIRAD   94 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~--~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~~   94 (176)
                      |+..|+.+.- .-.+++.+++.||.+|.|.-..  + +.+..++.|-+.+.+++.+-++.++.|.+. |..++++|+.+-
T Consensus         8 hrd~i~hv~~-tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~   86 (558)
T KOG0882|consen    8 HRDVITHVFP-TKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF   86 (558)
T ss_pred             ccceeeeEee-ehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence            8888877653 3467899999999999997643  2 345667778888999999999999999888 999999998754


Q ss_pred             CeeeEEeecceEeceEEEEECCCC---cEEEEEcCCCeEEEEeCCCc--eeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSG---RLLLAGYDDFNCNVWDSMKT--ERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~g~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      .............-+ ....+|..   .+.+.-..++.+.++|-...  +......-|..+|.++.+.+.+..+.+.-..
T Consensus        87 DminmiKL~~lPg~a-~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~  165 (558)
T KOG0882|consen   87 DMINMIKLVDLPGFA-EWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDIS  165 (558)
T ss_pred             chhhhcccccCCCce-EEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecccc
Confidence            333211111111111 12222221   23344557788999994332  2333344588899999999999988888888


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      |.|.-|.
T Consensus       166 gmVEyWs  172 (558)
T KOG0882|consen  166 GMVEYWS  172 (558)
T ss_pred             ceeEeec
Confidence            8888883

>KOG4714|consensus

Probab=98.09  E-value=1.1e-05  Score=57.84  Aligned_cols=143  Identities=16%  Similarity=0.191  Sum_probs=86.5

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCCCeeEEEEccCCcEEEEeeCCC------cEEEeeCCCCCeeeEEeec
Q psy15417         31 DMRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAVTFFPNGWAFATGSDDA------TCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        31 ~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~------~i~iwd~~~~~~~~~~~~~  103 (176)
                      .+..++++..||.+.+.+.+.-. ....++.-...--+.+....++.+.++ .-|      ..+.|+++.-..+. ....
T Consensus       100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~-~~g~~n~~d~~~a~~~~p~~t~~-~~~~  177 (319)
T KOG4714|consen  100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSG-GCGNWNAQDNFYANTLDPIKTLI-PSKK  177 (319)
T ss_pred             cCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecC-CcceEeeccceeeeccccccccc-cccc
Confidence            35678899999999999876411 111111111111122222233333332 222      34445544222211 1111


Q ss_pred             ceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCce-eeeeecCCCccEEEEEEeCC-CCEEEEccCCCcEEEeC
Q psy15417        104 NIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTE-RAGILAGHDNRVSCLGVTED-GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       104 ~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~-~~~l~tg~~d~~v~vwd  176 (176)
                      .. ..|.+++-||.. .++++|+.+|.+-+||.+... +...+..|...++.+-|+|. +..|.+++.||.+-.||
T Consensus       178 ~~-~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wd  252 (319)
T KOG4714|consen  178 AL-DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWD  252 (319)
T ss_pred             cc-ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEc
Confidence            11 247778888865 567889999999999976542 34456789999999999985 67889999999998886

>KOG2041|consensus

Probab=98.07  E-value=2.1e-05  Score=63.72  Aligned_cols=125  Identities=12%  Similarity=0.161  Sum_probs=92.2

Q ss_pred             ccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe--cCCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417          9 ALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF--PGHESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus         9 ~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      .+.+-..+.||++.|.-+.|..+.+.|-|...+|.|.+|=+-.+.=...+  ....+-|.+++|..+|..+.-.-.||.|
T Consensus        60 nLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGav  139 (1189)
T KOG2041|consen   60 NLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAV  139 (1189)
T ss_pred             ccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCE
Confidence            45555568899999999999999999999999999999988766421111  1134668999999999999888889888


Q ss_pred             EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                      -+=.+..+..   |+.+-......-+.|++|...++.+-++|.+++||.+
T Consensus       140 IVGsvdGNRI---wgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnq  186 (1189)
T KOG2041|consen  140 IVGSVDGNRI---WGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQ  186 (1189)
T ss_pred             EEEeecccee---cchhcchheccceeecccHHHHHhhhcCCcEEEeccc
Confidence            7655443321   2211111123457899999999999999999999954

>KOG1275|consensus

Probab=98.06  E-value=2.2e-05  Score=64.95  Aligned_cols=120  Identities=16%  Similarity=0.228  Sum_probs=88.4

Q ss_pred             CCcccCCCccCeEEEEEcCCCCEEEEEeC---------CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEee
Q psy15417         12 GSPAASGHTGDVMSLSLAPDMRTFVSGAC---------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGS   81 (176)
Q Consensus        12 ~~~~~~gh~~~V~~~~~~~~~~~l~s~s~---------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s   81 (176)
                      ..+.+..|++.|..++  -.|..|++|+.         |..|++||++.-+.+..++-+.++ .-+.|+|. ...++.++
T Consensus       209 ~iht~~aHs~siSDfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S  285 (1118)
T KOG1275|consen  209 TIHTFDAHSGSISDFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTS  285 (1118)
T ss_pred             eeeeeeccccceeeee--ccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEe
Confidence            3344567999887655  46888988886         677899999988877777655554 66889997 56788889


Q ss_pred             CCCcEEEeeCCC--CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEe
Q psy15417         82 DDATCRLFDIRA--DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD  134 (176)
Q Consensus        82 ~d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d  134 (176)
                      ..|...+-|.-+  +.....+........+....+++++..++.|..+|.+.+|.
T Consensus       286 ~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  286 QSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             cccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            999998887321  22223332222224578899999999999999999999997

>KOG1008|consensus

Probab=98.03  E-value=1.3e-06  Score=69.52  Aligned_cols=156  Identities=18%  Similarity=0.264  Sum_probs=103.1

Q ss_pred             CccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEcc-CCcEEEEee----CCCcEEEe
Q psy15417         19 HTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFP-NGWAFATGS----DDATCRLF   89 (176)
Q Consensus        19 h~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~-~~~~l~s~s----~d~~i~iw   89 (176)
                      -...+.|+++.-  +...++.|..+|.|-+-.++...  .....++|..+.++++|.+ |.++|+.|-    .|..+.||
T Consensus        55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw  134 (783)
T KOG1008|consen   55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW  134 (783)
T ss_pred             cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence            345667777543  45689999999999888765432  2445677888999999988 456677663    35579999


Q ss_pred             eCCCCC--eeeEEeecc-eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC-CCCEEEE
Q psy15417         90 DIRADQ--ELAMYSHDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-DGMAVAT  165 (176)
Q Consensus        90 d~~~~~--~~~~~~~~~-~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~t  165 (176)
                      |+.+.-  +.....+.. ...+.+++.|..+.+.+++|...+.++++|++.. ......-....+..+.+.| .++|+++
T Consensus       135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs-~~~~~svnTk~vqG~tVdp~~~nY~cs  213 (783)
T KOG1008|consen  135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQS-LDSVSSVNTKYVQGITVDPFSPNYFCS  213 (783)
T ss_pred             ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhh-hhhhhhhhhhhcccceecCCCCCceec
Confidence            987651  111111111 2234567788888889999999999999996521 1111111223456667777 6778766


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      -. |+.|.+||
T Consensus       214 ~~-dg~iAiwD  223 (783)
T KOG1008|consen  214 NS-DGDIAIWD  223 (783)
T ss_pred             cc-cCceeecc
Confidence            55 89999997

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.01  E-value=8.3e-05  Score=57.89  Aligned_cols=151  Identities=15%  Similarity=0.123  Sum_probs=96.4

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCc-------------
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDAT-------------   85 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~-------------   85 (176)
                      -.-++..++|||.|.+|++....+ |.+|+-.+...+..+. | ..|..+.|+|.+++|.+-+..+.             
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~  107 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSK  107 (561)
T ss_pred             cCcchhheeecCcchheehhhccc-eEEccccchhheeeee-c-CCceecccCcccceeeeeccCCccChhhccCCcccc
Confidence            456788999999999999887665 9999987776555555 3 34899999999999999887665             


Q ss_pred             --EEEeeCCCCCeeeEEeecceEe-ceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC---CccEEEEEEeCC
Q psy15417         86 --CRLFDIRADQELAMYSHDNIIC-GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH---DNRVSCLGVTED  159 (176)
Q Consensus        86 --i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~---~~~i~~~~~~~~  159 (176)
                        +.+||+.++..+..+....... .=.-+.|+.+..+++=- -...++|+++ +. .+...+-+   ...+...+++|.
T Consensus       108 n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~-n~~~~p~~~lr~~gi~dFsisP~  184 (561)
T COG5354         108 NNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TD-NIEEHPFKNLRPVGILDFSISPE  184 (561)
T ss_pred             CceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CC-ccccCchhhccccceeeEEecCC
Confidence              8999999988876665443210 11135566666654332 2235888885 21 11111111   234566667765


Q ss_pred             CC--EEE-----EccCCCcEEEe
Q psy15417        160 GM--AVA-----TGSWDSFLRIW  175 (176)
Q Consensus       160 ~~--~l~-----tg~~d~~v~vw  175 (176)
                      ++  .||     ..+.+.++++|
T Consensus       185 ~n~~~la~~tPEk~~kpa~~~i~  207 (561)
T COG5354         185 GNHDELAYWTPEKLNKPAMVRIL  207 (561)
T ss_pred             CCCceEEEEccccCCCCcEEEEE
Confidence            32  222     23445556655

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.99  E-value=0.0011  Score=41.75  Aligned_cols=101  Identities=15%  Similarity=0.235  Sum_probs=65.6

Q ss_pred             eEEEEEc---CCC-CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         23 VMSLSLA---PDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        23 V~~~~~~---~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      |++|++.   .|| ..|++||.|..|++|+-.  +.+.++... ..|.+++-... ..|+-+...|+|-+|+-.  +  +
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~--R   73 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDRS--Q--R   73 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeCc--c--e
Confidence            4555553   333 589999999999999854  556677654 45777777665 569999999999998742  1  2


Q ss_pred             EEee--cceEeceEEEEECCCC-cEEEEEcCCCeEE
Q psy15417         99 MYSH--DNIICGITSVAFSRSG-RLLLAGYDDFNCN  131 (176)
Q Consensus        99 ~~~~--~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~  131 (176)
                      .|..  ++.+..+....+.-+| +.|++|..+|.+-
T Consensus        74 lWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   74 LWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eeeeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            3332  2222223333333333 4789999998774

>KOG1008|consensus

Probab=97.96  E-value=1.9e-06  Score=68.56  Aligned_cols=157  Identities=19%  Similarity=0.319  Sum_probs=99.0

Q ss_pred             ccCCCccCeEEEEEcC-CCCEEEEEeC----CCeEEEEEcCCC--ee--eeEecC-CCCCeeEEEEccCCcEEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAP-DMRTFVSGAC----DASAKLWDIRDG--SC--KQTFPG-HESDINAVTFFPNGWAFATGSDDA   84 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~-~~~~l~s~s~----dg~v~~wd~~~~--~~--~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~   84 (176)
                      .-++|..+.++++|.+ |...|++|-.    |-.+++||+.+.  ..  ...|.+ .-..++++||..+.+++.+|...+
T Consensus        97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr  176 (783)
T KOG1008|consen   97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSR  176 (783)
T ss_pred             ecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccc
Confidence            3467888999999988 4456666532    345789999876  22  223333 334567899998889999999999


Q ss_pred             cEEEeeCCCC-CeeeEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCC-Ccee-eeeecCC----CccEEEEEE
Q psy15417         85 TCRLFDIRAD-QELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSM-KTER-AGILAGH----DNRVSCLGV  156 (176)
Q Consensus        85 ~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~-~~~~-~~~~~~~----~~~i~~~~~  156 (176)
                      .+.++|+|.. .....+..+    -++.+++.| .+.++++- .++.|.+||.. +-+. +..+...    ...+..++|
T Consensus       177 ~~~ifdlRqs~~~~~svnTk----~vqG~tVdp~~~nY~cs~-~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~ay  251 (783)
T KOG1008|consen  177 SVHIFDLRQSLDSVSSVNTK----YVQGITVDPFSPNYFCSN-SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAY  251 (783)
T ss_pred             hhhhhhhhhhhhhhhhhhhh----hcccceecCCCCCceecc-ccCceeeccchhhhccHHHHHhhCCCCcccceeeEEe
Confidence            9999999832 222222221    234466777 55666554 59999999932 2222 2222211    234888999


Q ss_pred             eCCCC-EEEEccCCC-cEEEeC
Q psy15417        157 TEDGM-AVATGSWDS-FLRIWN  176 (176)
Q Consensus       157 ~~~~~-~l~tg~~d~-~v~vwd  176 (176)
                      .|-.. .+++...|. +|+++|
T Consensus       252 cPtrtglla~l~RdS~tIrlyd  273 (783)
T KOG1008|consen  252 CPTRTGLLAVLSRDSITIRLYD  273 (783)
T ss_pred             ccCCcchhhhhccCcceEEEec
Confidence            98643 456666554 677664

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.95  E-value=0.0009  Score=54.28  Aligned_cols=122  Identities=17%  Similarity=0.151  Sum_probs=79.0

Q ss_pred             CCeEEEEEcCC-----CeeeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCCCCCe------------eeEEee
Q psy15417         41 DASAKLWDIRD-----GSCKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIRADQE------------LAMYSH  102 (176)
Q Consensus        41 dg~v~~wd~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~------------~~~~~~  102 (176)
                      +..|.+.|.++     .+.+..++- ....-.+.++|||++++.++ .++++.+.|+.+.+.            ....+.
T Consensus       295 gn~V~VID~~t~~~~~~~v~~yIPV-GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev  373 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSALTRYVPV-PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL  373 (635)
T ss_pred             CCEEEEEECCccccCCcceEEEEEC-CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc
Confidence            45688999887     345555553 34577899999998766555 489999999876432            111111


Q ss_pred             cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC----------ceeeeeecCCCccEEEEE-----EeCCCCEEEEc
Q psy15417        103 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK----------TERAGILAGHDNRVSCLG-----VTEDGMAVATG  166 (176)
Q Consensus       103 ~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~----------~~~~~~~~~~~~~i~~~~-----~~~~~~~l~tg  166 (176)
                       .  .+..-.+|.++|..+.+-..|.++..||+.+          ...+..+.-|++.-...+     -.|+|++|++.
T Consensus       374 -G--lGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~  449 (635)
T PRK02888        374 -G--LGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSL  449 (635)
T ss_pred             -C--CCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEc
Confidence             1  1223478999999888889999999999765          234444444544322111     24678887765

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.93  E-value=0.0016  Score=51.34  Aligned_cols=139  Identities=17%  Similarity=0.109  Sum_probs=77.4

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe-eCCCCCee
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF-DIRADQEL   97 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw-d~~~~~~~   97 (176)
                      ..-....+.++|+++.++.++ ||.-.++.....+-...     +.-...+|.+.+ .++.-...++|.++ +++. ...
T Consensus        31 ~~~~p~~ls~npngr~v~V~g-~geY~iyt~~~~r~k~~-----G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~-~~~  102 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLVCG-DGEYEIYTALAWRNKAF-----GSGLSFVWSSRN-RYAVLESSSTIKIYKNFKN-EVV  102 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEEEE-TTEEEEEETTTTEEEEE-----EE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE--TT
T ss_pred             CCcCCeeEEECCCCCEEEEEc-CCEEEEEEccCCccccc-----CceeEEEEecCc-cEEEEECCCeEEEEEcCcc-ccc
Confidence            334567899999999998855 78888887544333222     234567888854 56776668889995 4432 221


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      .....+.....+    |.  |.+|...+.+ .+.+||.++++.+..+.-.  .|..+.|++++.+++..+.+ .+.|.
T Consensus       103 k~i~~~~~~~~I----f~--G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il  170 (443)
T PF04053_consen  103 KSIKLPFSVEKI----FG--GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYIL  170 (443)
T ss_dssp             -----SS-EEEE----E---SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEE
T ss_pred             eEEcCCcccceE----Ec--CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEE
Confidence            222222211222    21  7777666554 7999999999888887632  37889999999999988766 45443

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG3621|consensus

Probab=97.92  E-value=0.00023  Score=57.46  Aligned_cols=119  Identities=13%  Similarity=0.195  Sum_probs=87.9

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      |...|.--+++..+++++-|+.-|.+.+|+...++... ...+-.+.+..++++++..+++.|++.|.|.++.+......
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~  111 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR  111 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence            44455555667789999999999999999988776332 23234455666788899999999999999999887553321


Q ss_pred             --eEEe--ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417         98 --AMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus        98 --~~~~--~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~  137 (176)
                        ..+.  ...+.+.|+++.|++++..+++|...|++..-.+..
T Consensus       112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence              1112  222357899999999999999999999997766544

>KOG3617|consensus

Probab=97.92  E-value=3.6e-05  Score=63.52  Aligned_cols=106  Identities=17%  Similarity=0.227  Sum_probs=82.1

Q ss_pred             eEEEEccCCcEEEEeeC----CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee
Q psy15417         66 NAVTFFPNGWAFATGSD----DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA  141 (176)
Q Consensus        66 ~~v~~~~~~~~l~s~s~----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~  141 (176)
                      +-..|+|....|+.++.    .|.+.||- .++++..-...+   -.+.++.|||..-+|+.|...|.+.+|.....+..
T Consensus        19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P---~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~h   94 (1416)
T KOG3617|consen   19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYP---VHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETH   94 (1416)
T ss_pred             cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccccc---eehhhhccChHHHHHhhccccceeEEEecCCceee
Confidence            34578888777766653    46777773 344432221222   13457899999999999999999999998777887


Q ss_pred             eeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        142 GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      .....|...|..+.|+++|..+.|+-.-|.+.+|
T Consensus        95 tv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lw  128 (1416)
T KOG3617|consen   95 TVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLW  128 (1416)
T ss_pred             eeccCCCCCceeEEecCCCCeEEEcCCCceeEEE
Confidence            7778899999999999999999999999999998

>KOG1920|consensus

Probab=97.89  E-value=0.00082  Score=57.50  Aligned_cols=154  Identities=16%  Similarity=0.168  Sum_probs=96.0

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEc----CC-------------------CeeeeEecCCCC------------
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDI----RD-------------------GSCKQTFPGHES------------   63 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~----~~-------------------~~~~~~~~~h~~------------   63 (176)
                      -...|.+++|+||+..++..+..+++.+-+-    =.                   |+....|+|..+            
T Consensus       108 vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek  187 (1265)
T KOG1920|consen  108 VDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEK  187 (1265)
T ss_pred             ccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccc
Confidence            3578999999999999998888888754321    00                   111123332111            


Q ss_pred             ---------CeeEEEEccCCcEEEEe-----eCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEc---C
Q psy15417         64 ---------DINAVTFFPNGWAFATG-----SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY---D  126 (176)
Q Consensus        64 ---------~v~~v~~~~~~~~l~s~-----s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~  126 (176)
                               .=+.|.|.-||.+|++.     ...+.|++||-+ +..-.......  .-=.+++|-|.|..+++..   .
T Consensus       188 ~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~--~l~~~LsWkPsgs~iA~iq~~~s  264 (1265)
T KOG1920|consen  188 ALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVE--GLQHSLSWKPSGSLIAAIQCKTS  264 (1265)
T ss_pred             cccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCccc--ccccceeecCCCCeEeeeeecCC
Confidence                     11348999999888773     333789999954 32211111110  0113689999999887743   4


Q ss_pred             CCeEEEEe---CCCceeeeeecCCCccEEEEEEeCCCCEEEE---ccCCCcEEEe
Q psy15417        127 DFNCNVWD---SMKTERAGILAGHDNRVSCLGVTEDGMAVAT---GSWDSFLRIW  175 (176)
Q Consensus       127 d~~i~v~d---~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~t---g~~d~~v~vw  175 (176)
                      +..|.+|.   ++.++.....+.....+..++|..++..||+   ......|++|
T Consensus       265 d~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lw  319 (1265)
T KOG1920|consen  265 DSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLW  319 (1265)
T ss_pred             CCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEE
Confidence            45688886   2223333334444445899999999999887   5666669998

>KOG1920|consensus

Probab=97.89  E-value=0.0019  Score=55.40  Aligned_cols=153  Identities=14%  Similarity=0.109  Sum_probs=97.9

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe----eCCCCCe
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF----DIRADQE   96 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw----d~~~~~~   96 (176)
                      ..|.++.|..+..-++.+...|.|.+-|..+... .....-...|.+.+|+|+...++-...++++-+-    ++-.++.
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~  147 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP  147 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence            5788999998888888889999999888877642 2222235679999999999998888877777553    2222222


Q ss_pred             e----------eE--Eee-----cc---------------------eEeceEEEEECCCCcEEEE-----EcCCCeEEEE
Q psy15417         97 L----------AM--YSH-----DN---------------------IICGITSVAFSRSGRLLLA-----GYDDFNCNVW  133 (176)
Q Consensus        97 ~----------~~--~~~-----~~---------------------~~~~v~~~~~~~~~~~l~~-----g~~d~~i~v~  133 (176)
                      +          ..  |+.     ..                     ....-.+|.|.-||.++++     ....+.++||
T Consensus       148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~  227 (1265)
T KOG1920|consen  148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVY  227 (1265)
T ss_pred             cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEe
Confidence            2          00  000     00                     0001235889889998877     3333799999


Q ss_pred             eCCCceeeeeecCCCccEEEEEEeCCCCEEEEcc---CCCcEEEe
Q psy15417        134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGS---WDSFLRIW  175 (176)
Q Consensus       134 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~---~d~~v~vw  175 (176)
                      |-+ +..-.......+.-.+++|.|.|..+|+-.   .|+.|.+|
T Consensus       228 drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~Ivff  271 (1265)
T KOG1920|consen  228 DRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFF  271 (1265)
T ss_pred             ccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEE
Confidence            965 333222222223335688999999988753   34456654

>KOG3617|consensus

Probab=97.87  E-value=0.00032  Score=58.20  Aligned_cols=70  Identities=13%  Similarity=0.169  Sum_probs=61.6

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      +.+++|+|..-.|+.|-.-|.+-+|..++.+.......|+.++..+.|+|+|..+.++..-|.+.+|...
T Consensus        62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            4468999998899999999999999998877666666799999999999999999999999999999753

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.83  E-value=0.002  Score=52.31  Aligned_cols=144  Identities=15%  Similarity=0.036  Sum_probs=90.6

Q ss_pred             EcCCCCEEEE-EeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-------------------------
Q psy15417         28 LAPDMRTFVS-GACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-------------------------   81 (176)
Q Consensus        28 ~~~~~~~l~s-~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-------------------------   81 (176)
                      ++|||+.+.. ....+.+-+.|..+.+...++.-. +....++++|+++++++.+                         
T Consensus       200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vd-gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni  278 (635)
T PRK02888        200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVD-GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI  278 (635)
T ss_pred             cCCCCCEeecccceeEEEEEEECccceEEEEEEeC-CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch
Confidence            4567765533 333455678888877766666532 3456678888888776665                         


Q ss_pred             ---------------CCCcEEEeeCCC----C-CeeeEEeecceEeceEEEEECCCCcEEEE-EcCCCeEEEEeCCCcee
Q psy15417         82 ---------------DDATCRLFDIRA----D-QELAMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNVWDSMKTER  140 (176)
Q Consensus        82 ---------------~d~~i~iwd~~~----~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-g~~d~~i~v~d~~~~~~  140 (176)
                                     .++.|.+.|.++    + ......+...   ....+.++|||+++++ +..+.++.|.|+.+.+.
T Consensus       279 ~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIPVGK---sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~  355 (635)
T PRK02888        279 ARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVPVPK---NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD  355 (635)
T ss_pred             HHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEECCC---CccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence                           123466666554    1 2222222211   2346889999997655 56788999999876432


Q ss_pred             ------------eeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        141 ------------AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       141 ------------~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                                  ..+..--.++ ...+|.++|..+.|-..|.+|..||
T Consensus       356 ~~~~~~~~~~~vvaevevGlGP-LHTaFDg~G~aytslf~dsqv~kwn  402 (635)
T PRK02888        356 LFDGKIKPRDAVVAEPELGLGP-LHTAFDGRGNAYTTLFLDSQIVKWN  402 (635)
T ss_pred             hhhccCCccceEEEeeccCCCc-ceEEECCCCCEEEeEeecceeEEEe
Confidence                        2222222233 3568999998888999999999996

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.78  E-value=0.0016  Score=54.53  Aligned_cols=134  Identities=14%  Similarity=0.163  Sum_probs=88.2

Q ss_pred             CEEEE-EeCCCeEEEEEcCCCeeeeEecCCCCC-eeEEEEccC-------CcEEEEeeCCCcEEEeeCCCCC-eeeEEee
Q psy15417         33 RTFVS-GACDASAKLWDIRDGSCKQTFPGHESD-INAVTFFPN-------GWAFATGSDDATCRLFDIRADQ-ELAMYSH  102 (176)
Q Consensus        33 ~~l~s-~s~dg~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~~~-------~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~  102 (176)
                      .+++. ......+.-.|+++|+.+..+..|... |.  .+.|+       ....+.|-.+..+..||.|-.. .+.....
T Consensus       494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~--~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~  571 (794)
T PF08553_consen  494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVV--DIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS  571 (794)
T ss_pred             ceEeecCCCCCceEEEecCCCcEEEEeecCCCccee--EecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence            34333 344567888999999999999887643 44  44443       3456888888999999988532 2211111


Q ss_pred             -c-ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417        103 -D-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus       103 -~-~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                       . ......+|++-..+| ++++|+.+|.||+||-.....-..+++-..+|..+.++.||.+|+..+..
T Consensus       572 k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t  639 (794)
T PF08553_consen  572 KQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKT  639 (794)
T ss_pred             cccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc
Confidence             1 111235566555454 67889999999999943323333566777899999999999997655443

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.77  E-value=0.0083  Score=44.78  Aligned_cols=141  Identities=15%  Similarity=0.167  Sum_probs=91.7

Q ss_pred             EEEEcC-CCCEEEEEeCCCe-EEEEEcCCCeeeeEecCCCCCe--eEEEEccCCcEEEEeeC-----CCcEEEeeCC-CC
Q psy15417         25 SLSLAP-DMRTFVSGACDAS-AKLWDIRDGSCKQTFPGHESDI--NAVTFFPNGWAFATGSD-----DATCRLFDIR-AD   94 (176)
Q Consensus        25 ~~~~~~-~~~~l~s~s~dg~-v~~wd~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~s~-----d~~i~iwd~~-~~   94 (176)
                      .++.+| ....++.+-.-|+ ..+||.++++....+....+.-  -...|+++|.+|++.-.     .|.|-+||.. +-
T Consensus         9 ~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~   88 (305)
T PF07433_consen    9 GVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGY   88 (305)
T ss_pred             ceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCc
Confidence            566788 5567777777777 5689999998776665443322  23689999999988744     4679999987 33


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcC-------CC-----------eEEEEeCCCceeeee--e--cCCCccEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYD-------DF-----------NCNVWDSMKTERAGI--L--AGHDNRVS  152 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-------d~-----------~i~v~d~~~~~~~~~--~--~~~~~~i~  152 (176)
                      +.+.++....  .+..-+.+.||++.|+++..       .|           .+...|..+++.+..  +  ..|..+|.
T Consensus        89 ~ri~E~~s~G--IGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiR  166 (305)
T PF07433_consen   89 RRIGEFPSHG--IGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIR  166 (305)
T ss_pred             EEEeEecCCC--cChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccccccee
Confidence            3344443322  23345778999987777531       12           222344556665554  3  23677899


Q ss_pred             EEEEeCCCCEEEEcc
Q psy15417        153 CLGVTEDGMAVATGS  167 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~  167 (176)
                      .+++.++|..+...-
T Consensus       167 HLa~~~~G~V~~a~Q  181 (305)
T PF07433_consen  167 HLAVDGDGTVAFAMQ  181 (305)
T ss_pred             eEEecCCCcEEEEEe
Confidence            999999887665443

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.77  E-value=0.0031  Score=39.80  Aligned_cols=100  Identities=19%  Similarity=0.280  Sum_probs=61.2

Q ss_pred             eeEEEEcc---C-CcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee
Q psy15417         65 INAVTFFP---N-GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER  140 (176)
Q Consensus        65 v~~v~~~~---~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~  140 (176)
                      |+++++..   + .+.|+.|+.|..||+|+  .++.+.......   .+..+.-... ..|+.+..+|+|-+|+-  ...
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~--~~e~~~Ei~e~~---~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~R   73 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFK--GDEIVAEITETD---KVTSLCSLGG-GRFAYALANGTVGVYDR--SQR   73 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEe--CCcEEEEEeccc---ceEEEEEcCC-CEEEEEecCCEEEEEeC--cce
Confidence            66777664   2 26799999999999996  334444433222   3444444333 67889999999999983  223


Q ss_pred             eeeecCCCccEEEEEEe-CCC---CEEEEccCCCcEE
Q psy15417        141 AGILAGHDNRVSCLGVT-EDG---MAVATGSWDSFLR  173 (176)
Q Consensus       141 ~~~~~~~~~~i~~~~~~-~~~---~~l~tg~~d~~v~  173 (176)
                      +...... ..+.++++. .++   .-|++|=.+|.|-
T Consensus        74 lWRiKSK-~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   74 LWRIKSK-NQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eeeeccC-CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            3333222 225555543 232   2577887788764

>KOG2395|consensus

Probab=97.77  E-value=0.001  Score=52.49  Aligned_cols=133  Identities=18%  Similarity=0.213  Sum_probs=89.0

Q ss_pred             EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-------EEEEeeCCCcEEEeeCCCCCe--eeEEe-ec
Q psy15417         34 TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-------AFATGSDDATCRLFDIRADQE--LAMYS-HD  103 (176)
Q Consensus        34 ~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-------~l~s~s~d~~i~iwd~~~~~~--~~~~~-~~  103 (176)
                      +|.++.....++-.|+..|+.+.++.-+.. |+-+.+.|+.+       .-+.|-.+..|.-||+|-...  +..-+ ++
T Consensus       348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kq  426 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQ  426 (644)
T ss_pred             EeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccc
Confidence            455555556688889999999999987766 77788887642       246677788899999873322  11111 11


Q ss_pred             c-eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417        104 N-IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus       104 ~-~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      . .....+|.+-.-+ -++++|+.+|.||+||-.-...-..+++-...|..+..+.+|+.|+..+.
T Consensus       427 y~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~  491 (644)
T KOG2395|consen  427 YSTKNNFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCK  491 (644)
T ss_pred             cccccccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecc
Confidence            0 1122445554434 36788999999999995323334457777888999999999998754443

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=97.75  E-value=0.0031  Score=49.05  Aligned_cols=135  Identities=12%  Similarity=-0.028  Sum_probs=84.1

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEE
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS  111 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~  111 (176)
                      +..++.++.+|.+..+|..+|+.+......  ....+.  ..+..++.++.++.+...|..+++.+........ ....+
T Consensus       256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~--~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~s  330 (394)
T PRK11138        256 GGVVYALAYNGNLVALDLRSGQIVWKREYG--SVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLH-RLLTA  330 (394)
T ss_pred             CCEEEEEEcCCeEEEEECCCCCEEEeecCC--CccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCC-CcccC
Confidence            455677778999999999999877665421  111121  2455677788899999999988765433221110 00111


Q ss_pred             EEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEE-EEEeCCCCEEEEccCCCcEEEe
Q psy15417        112 VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC-LGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       112 ~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ..+  .+..++.+..+|.++..|..+++.+....-....+.. ..+.  +..|..++.||.+..+
T Consensus       331 p~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~--~~~l~v~t~~G~l~~~  391 (394)
T PRK11138        331 PVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVVA--DDKLLIQARDGTVYAI  391 (394)
T ss_pred             CEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEEE--CCEEEEEeCCceEEEE
Confidence            111  2345677889999999999888887765433222222 1222  3467788899988765

>KOG2314|consensus

Probab=97.71  E-value=0.0016  Score=51.70  Aligned_cols=99  Identities=20%  Similarity=0.258  Sum_probs=69.4

Q ss_pred             CeEEEEEcCCCCEEEEEeCC-----------CeEEEEEcCCCeeeeEecCC--CCCee-EEEEccCCcEEEEeeCCCcEE
Q psy15417         22 DVMSLSLAPDMRTFVSGACD-----------ASAKLWDIRDGSCKQTFPGH--ESDIN-AVTFFPNGWAFATGSDDATCR   87 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~d-----------g~v~~wd~~~~~~~~~~~~h--~~~v~-~v~~~~~~~~l~s~s~d~~i~   87 (176)
                      .|--++|||+.++|+|-+..           ..+.|||+++|...+.|...  ...+. -..|+.|+++++.-.. .+|.
T Consensus       251 ~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sis  329 (698)
T KOG2314|consen  251 GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSIS  329 (698)
T ss_pred             CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEE
Confidence            35679999999999998863           45789999999988888762  23332 3688889988877665 5899


Q ss_pred             EeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEE
Q psy15417         88 LFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA  123 (176)
Q Consensus        88 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  123 (176)
                      |++..+-..+-...  -.+.+|....|+|.+.+|+-
T Consensus       330 IyEtpsf~lld~Ks--lki~gIr~FswsP~~~llAY  363 (698)
T KOG2314|consen  330 IYETPSFMLLDKKS--LKISGIRDFSWSPTSNLLAY  363 (698)
T ss_pred             EEecCceeeecccc--cCCccccCcccCCCcceEEE
Confidence            99876532221111  12346777889998776654

>KOG3621|consensus

Probab=97.69  E-value=0.00044  Score=55.98  Aligned_cols=112  Identities=15%  Similarity=0.117  Sum_probs=79.2

Q ss_pred             CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee
Q psy15417         61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER  140 (176)
Q Consensus        61 h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~  140 (176)
                      +...|.=-++....++++-|+..|.+.+++-..++.. ..........+..+.+|++..++++|+..|.+.++.+....+
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~-~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p  110 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMR-KLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELP  110 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhh-cccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence            3455665677778899999999999999985444332 222211222345567888888999999999999997654321


Q ss_pred             -eeee-----cCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417        141 -AGIL-----AGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus       141 -~~~~-----~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                       ...+     ..|...|+|++|+++++.+.+|-.-|+|.
T Consensus       111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~  149 (726)
T KOG3621|consen  111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVV  149 (726)
T ss_pred             CcceeeccccccCCceEEEEEecccccEEeecCCCceEE
Confidence             1111     13567899999999999999998888775

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=97.47  E-value=0.0015  Score=51.17  Aligned_cols=117  Identities=17%  Similarity=0.181  Sum_probs=83.0

Q ss_pred             EEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEE
Q psy15417         45 KLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG  124 (176)
Q Consensus        45 ~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g  124 (176)
                      .+|+..+.+....+....-++..++++|.|.+|++... ..|.+|.-.....+..+.+.    .|-.+.|+|.+.+|.+-
T Consensus        15 ~f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~~~~l~~~~~~----~V~~~~fSP~~kYL~tw   89 (561)
T COG5354          15 VFWNSQSEVIHTRFESENWPVAYVSESPLGTYLFSEHA-AGVECWGGPSKAKLVRFRHP----DVKYLDFSPNEKYLVTW   89 (561)
T ss_pred             EeecCccccccccccccCcchhheeecCcchheehhhc-cceEEccccchhheeeeecC----CceecccCcccceeeee
Confidence            46666665555555556678999999999998888755 46888987665544444443    35678999999999886


Q ss_pred             cCCC---------------eEEEEeCCCceeeeeecCCCcc--EE-EEEEeCCCCEEEEc
Q psy15417        125 YDDF---------------NCNVWDSMKTERAGILAGHDNR--VS-CLGVTEDGMAVATG  166 (176)
Q Consensus       125 ~~d~---------------~i~v~d~~~~~~~~~~~~~~~~--i~-~~~~~~~~~~l~tg  166 (176)
                      ....               .+.+||+..+..+..+.....+  .+ -+.|+-+.+++|-.
T Consensus        90 ~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv  149 (561)
T COG5354          90 SREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV  149 (561)
T ss_pred             ccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh
Confidence            5443               3889999999888877665444  33 56688777776543

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.46  E-value=0.032  Score=43.37  Aligned_cols=142  Identities=17%  Similarity=0.189  Sum_probs=92.0

Q ss_pred             eEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCCCCCeee
Q psy15417         23 VMSLSLAPDMRTFVSGAC---DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIRADQELA   98 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~---dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~   98 (176)
                      -..++++++++.+..+..   ++++.+.|..+++...+...-..+ ..+++.|+++.++... .++.+.+.|........
T Consensus       118 P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~  196 (381)
T COG3391         118 PVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR  196 (381)
T ss_pred             CceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec
Confidence            346889999987777766   688999999998877775544445 8899999998655554 67889999966544332


Q ss_pred             EEe---ecceEeceEEEEECCCCcEEEEEcCC---CeEEEEeCCCceeeee-ecCCCccEEEEEEeCCCCEEEEc
Q psy15417         99 MYS---HDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        99 ~~~---~~~~~~~v~~~~~~~~~~~l~~g~~d---~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                       ..   ..........+.+.|++..+......   +.+.+.|...+..... ...-...-..+++.|+|.++...
T Consensus       197 -~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~  270 (381)
T COG3391         197 -GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVA  270 (381)
T ss_pred             -cccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEE
Confidence             10   00111123458899999865544333   5888888776655443 22111133456788888776544

>KOG2114|consensus

Probab=97.46  E-value=0.0077  Score=50.18  Aligned_cols=156  Identities=16%  Similarity=0.248  Sum_probs=93.4

Q ss_pred             CCccC-eEEEEEcCCCCEEEEEeCCCe-----EEEEEcCCC------eee---eEec----CCCCCeeEEEEccCCcEEE
Q psy15417         18 GHTGD-VMSLSLAPDMRTFVSGACDAS-----AKLWDIRDG------SCK---QTFP----GHESDINAVTFFPNGWAFA   78 (176)
Q Consensus        18 gh~~~-V~~~~~~~~~~~l~s~s~dg~-----v~~wd~~~~------~~~---~~~~----~h~~~v~~v~~~~~~~~l~   78 (176)
                      .+... |..+-...+..+|++-+.|+.     +++||++..      .+.   +.++    ..+.|+.+++++.+-+.++
T Consensus        62 a~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv  141 (933)
T KOG2114|consen   62 AYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIV  141 (933)
T ss_pred             ecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEE
Confidence            34444 333333334457777666654     799998532      233   1121    1357889999999988999


Q ss_pred             EeeCCCcEEEee--CCCCCee-eEEeecceEeceEEEEECCCCcE-EEEEcCCCeEEEEeCCCcee-eeeecCCCccEEE
Q psy15417         79 TGSDDATCRLFD--IRADQEL-AMYSHDNIICGITSVAFSRSGRL-LLAGYDDFNCNVWDSMKTER-AGILAGHDNRVSC  153 (176)
Q Consensus        79 s~s~d~~i~iwd--~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~-l~~g~~d~~i~v~d~~~~~~-~~~~~~~~~~i~~  153 (176)
                      .|-.+|.|..+.  +-.+... ..+.+.. ..+|+.+.+..++.. +++. +...+.+|.+....+ ...+..|...+.|
T Consensus       142 ~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~-~~pITgL~~~~d~~s~lFv~-Tt~~V~~y~l~gr~p~~~~ld~~G~~lnC  219 (933)
T KOG2114|consen  142 CGFTNGLVICYKGDILRDRGSRQDYSHRG-KEPITGLALRSDGKSVLFVA-TTEQVMLYSLSGRTPSLKVLDNNGISLNC  219 (933)
T ss_pred             EEecCcEEEEEcCcchhccccceeeeccC-CCCceeeEEecCCceeEEEE-ecceeEEEEecCCCcceeeeccCCcccee
Confidence            999999988763  2111111 1222322 257888888888765 3333 334688998764442 3345666778899


Q ss_pred             EEEeCCCCEEEEccCCCcEEEeC
Q psy15417        154 LGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       154 ~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .++++....++.++ +..+.+||
T Consensus       220 ss~~~~t~qfIca~-~e~l~fY~  241 (933)
T KOG2114|consen  220 SSFSDGTYQFICAG-SEFLYFYD  241 (933)
T ss_pred             eecCCCCccEEEec-CceEEEEc
Confidence            99987655344443 33566553

>KOG2444|consensus

Probab=97.46  E-value=0.00042  Score=49.02  Aligned_cols=138  Identities=14%  Similarity=0.141  Sum_probs=80.6

Q ss_pred             EEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC-CeeeEEeecceEece-E
Q psy15417         34 TFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD-QELAMYSHDNIICGI-T  110 (176)
Q Consensus        34 ~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~~~~~v-~  110 (176)
                      .+..-+.||.|.-++++.-+... .-+.|... .  ....-+..++.|+.+|.|.+|+.... +....+....  ..+ +
T Consensus        32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~-~--~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~--e~i~~  106 (238)
T KOG2444|consen   32 LLRATSADGLVRERKVRKHKESCRSERFIDEG-Q--RVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGE--ESIDL  106 (238)
T ss_pred             hhccccCCcccccchhhhhhhhhhhhhhhhcc-e--eecccCceEEeecccceEEEecCCccchHHHhhhccc--cccee
Confidence            34555667877777765432111 01111111 1  11123567899999999999886521 1111111111  111 1


Q ss_pred             EEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCC-ccEEEEEEeCCCCEEEEc--cCCCcEEEeC
Q psy15417        111 SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD-NRVSCLGVTEDGMAVATG--SWDSFLRIWN  176 (176)
Q Consensus       111 ~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~tg--~~d~~v~vwd  176 (176)
                      -+....++.+..++..++.|+.|+++..+.+.....|+ .++.-....-.+.+++..  |.|..++.|+
T Consensus       107 ~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~  175 (238)
T KOG2444|consen  107 GIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWN  175 (238)
T ss_pred             ccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcc
Confidence            22222345578889999999999999888888887787 455555555556677666  7777777775

>KOG1645|consensus

Probab=97.45  E-value=0.00073  Score=51.46  Aligned_cols=92  Identities=20%  Similarity=0.238  Sum_probs=70.0

Q ss_pred             EEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCC-cEE
Q psy15417         44 AKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG-RLL  121 (176)
Q Consensus        44 v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l  121 (176)
                      |++.+..+-+....+++|...+.+++|+|..+ ++..++.+..|++.|+++...+..+....   .+-+++|..+. .++
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~---~~wSC~wDlde~h~I  251 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYN---QIWSCCWDLDERHVI  251 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccC---CceeeeeccCCccee
Confidence            55565555555556777888899999999877 68889999999999999876655543332   35567787664 588


Q ss_pred             EEEcCCCeEEEEeCCCc
Q psy15417        122 LAGYDDFNCNVWDSMKT  138 (176)
Q Consensus       122 ~~g~~d~~i~v~d~~~~  138 (176)
                      .+|..+|.+.|||+...
T Consensus       252 YaGl~nG~VlvyD~R~~  268 (463)
T KOG1645|consen  252 YAGLQNGMVLVYDMRQP  268 (463)
T ss_pred             EEeccCceEEEEEccCC
Confidence            99999999999997643

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.38  E-value=0.00084  Score=35.68  Aligned_cols=34  Identities=18%  Similarity=0.282  Sum_probs=29.7

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC   54 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~   54 (176)
                      ...|.+++|+|...+++.++.+|.|.++.+ +++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            356999999999999999999999999998 4443

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=97.34  E-value=0.013  Score=45.58  Aligned_cols=108  Identities=11%  Similarity=0.005  Sum_probs=70.4

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC----------Cee-EEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHES----------DIN-AVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~----------~v~-~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      +..++.++.++.+.-+|.++|+.++.......          .+. .+..  .+..++.++.++.+..+|.++++.+...
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~  146 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQT  146 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence            55777888899999999999998887653220          000 0111  2456777788899999999888876554


Q ss_pred             eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec
Q psy15417        101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA  145 (176)
Q Consensus       101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~  145 (176)
                      .......  .+-.+. + ..++.+..++.+.-+|..+++.+....
T Consensus       147 ~~~~~~~--ssP~v~-~-~~v~v~~~~g~l~ald~~tG~~~W~~~  187 (394)
T PRK11138        147 KVAGEAL--SRPVVS-D-GLVLVHTSNGMLQALNESDGAVKWTVN  187 (394)
T ss_pred             cCCCcee--cCCEEE-C-CEEEEECCCCEEEEEEccCCCEeeeec
Confidence            4332211  111111 3 345567788899999998888776654

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.28  E-value=0.047  Score=41.31  Aligned_cols=137  Identities=16%  Similarity=0.168  Sum_probs=82.3

Q ss_pred             CCEEEEEeC---------C-CeEEEEEcCCC----eeeeEe--cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         32 MRTFVSGAC---------D-ASAKLWDIRDG----SCKQTF--PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        32 ~~~l~s~s~---------d-g~v~~wd~~~~----~~~~~~--~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..+++.|..         . |.+.++++.+.    .....+  ....++|++++-. ++..+++.  .+.+.+|++...+
T Consensus        42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~lv~~~--g~~l~v~~l~~~~  118 (321)
T PF03178_consen   42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGRLVVAV--GNKLYVYDLDNSK  118 (321)
T ss_dssp             SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTEEEEEE--TTEEEEEEEETTS
T ss_pred             cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCEEEEee--cCEEEEEEccCcc
Confidence            457777765         2 88999999884    122222  1246889998777 45544444  3789999998776


Q ss_pred             -eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEE--eCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         96 -ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW--DSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        96 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~--d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                       ....-..... ..+.++...  +.++++|.....+.++  +. ....+..+.  ....++.++.|.+++..++.+..+|
T Consensus       119 ~l~~~~~~~~~-~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~-~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~g  194 (321)
T PF03178_consen  119 TLLKKAFYDSP-FYITSLSVF--KNYILVGDAMKSVSLLRYDE-ENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDG  194 (321)
T ss_dssp             SEEEEEEE-BS-SSEEEEEEE--TTEEEEEESSSSEEEEEEET-TTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTS
T ss_pred             cchhhheecce-EEEEEEecc--ccEEEEEEcccCEEEEEEEc-cCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCC
Confidence             3332222221 234455543  5688888877777766  53 222223222  2345688888886657888998999


Q ss_pred             cEEEe
Q psy15417        171 FLRIW  175 (176)
Q Consensus       171 ~v~vw  175 (176)
                      .+.++
T Consensus       195 nl~~l  199 (321)
T PF03178_consen  195 NLFVL  199 (321)
T ss_dssp             EEEEE
T ss_pred             eEEEE
Confidence            88875

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG4640|consensus

Probab=97.25  E-value=0.0015  Score=52.47  Aligned_cols=68  Identities=16%  Similarity=0.150  Sum_probs=58.6

Q ss_pred             ceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEE-EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        108 GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS-CLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       108 ~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .+-.+.|+|.-..++.+.++|.+.++-+. ...+.+++-|+..+. +++|.|||+.||.|-.||+|++-|
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~D   90 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHD   90 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEE
Confidence            45578899999999999999998888765 777888886777666 999999999999999999999865

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.16  E-value=0.031  Score=43.63  Aligned_cols=114  Identities=18%  Similarity=0.235  Sum_probs=74.5

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee-------------------------------------------eEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK-------------------------------------------QTF   58 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~-------------------------------------------~~~   58 (176)
                      .|..+.|.++..-|+.|-..|.|-+|.+..++--                                           .-+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            5788999999999999999999988876322100                                           012


Q ss_pred             cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc------eEeceEEEEEC-----CCC---cEEEEE
Q psy15417         59 PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN------IICGITSVAFS-----RSG---RLLLAG  124 (176)
Q Consensus        59 ~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~-----~~~---~~l~~g  124 (176)
                      ....++|++++.+.-| .++.|..+|.+.+.|+|.+..+..-....      ..+.+.++.|.     -|+   ..+++|
T Consensus        83 ~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            2346789999997556 78888999999999999876654422222      12335556553     233   578899


Q ss_pred             cCCCeEEEEeCC
Q psy15417        125 YDDFNCNVWDSM  136 (176)
Q Consensus       125 ~~d~~i~v~d~~  136 (176)
                      +..|.+.+|.+.
T Consensus       162 Tn~G~v~~fkIl  173 (395)
T PF08596_consen  162 TNSGNVLTFKIL  173 (395)
T ss_dssp             ETTSEEEEEEEE
T ss_pred             eCCCCEEEEEEe
Confidence            999999999754

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.14  E-value=0.065  Score=40.28  Aligned_cols=150  Identities=12%  Similarity=0.119  Sum_probs=75.2

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      .+.+..+.-+++++++++++.-....-||.-...=...-+.-..+|.++.|.|++.+.+.+ +.+.++.=+..  .....
T Consensus       144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~--~~~~~  220 (302)
T PF14870_consen  144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDP--DDGET  220 (302)
T ss_dssp             ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-T--TEEEE
T ss_pred             cceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCC--CCccc
Confidence            4667888889999988888655555678764322122222345789999999998765544 88888875511  11122


Q ss_pred             Eee---c--ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec---CCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417        100 YSH---D--NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA---GHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus       100 ~~~---~--~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      +..   +  ..--.+..+++.++....++|+. |++ +.....++.-...+   .-..-+..+.|.++.+-++.| .+|.
T Consensus       221 w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG-~~G~  297 (302)
T PF14870_consen  221 WSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG-QDGV  297 (302)
T ss_dssp             E---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--STTE
T ss_pred             cccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEEC-CCcE
Confidence            211   1  11124678899998888877754 444 33333333222221   222346677787666666666 6666


Q ss_pred             EEEe
Q psy15417        172 LRIW  175 (176)
Q Consensus       172 v~vw  175 (176)
                      +.=|
T Consensus       298 ll~~  301 (302)
T PF14870_consen  298 LLRY  301 (302)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            6544

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.13  E-value=0.058  Score=39.40  Aligned_cols=165  Identities=13%  Similarity=0.181  Sum_probs=88.2

Q ss_pred             cccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe------eeeEec-----CCCCCeeEEEEccCCcE
Q psy15417          8 SALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS------CKQTFP-----GHESDINAVTFFPNGWA   76 (176)
Q Consensus         8 ~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~------~~~~~~-----~h~~~v~~v~~~~~~~~   76 (176)
                      +.++.+.++.| .+....+++..++.++++--.++.+.++++....      ....+.     .+...+.+++|.|.+..
T Consensus        53 G~vlr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~  131 (248)
T PF06977_consen   53 GKVLRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNR  131 (248)
T ss_dssp             --EEEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTE
T ss_pred             CCEEEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCE
Confidence            34555555666 3566788888888888877678999888883321      111221     23456899999998877


Q ss_pred             EEEeeCCCcEEEeeCCC---CCeeeEEee---c---ceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecC
Q psy15417         77 FATGSDDATCRLFDIRA---DQELAMYSH---D---NIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAG  146 (176)
Q Consensus        77 l~s~s~d~~i~iwd~~~---~~~~~~~~~---~---~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~  146 (176)
                      |+.+-...-..++.++.   ...+.....   .   .....++.++++|. +.+++-...+..+..+| ..+++...+.-
T Consensus       132 L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L  210 (248)
T PF06977_consen  132 LFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSL  210 (248)
T ss_dssp             EEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-
T ss_pred             EEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEe
Confidence            77776665566666543   222111111   1   11234678899997 46777788888899999 56665443321


Q ss_pred             C---------CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        147 H---------DNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       147 ~---------~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      .         -.+--.++|.++|...++. .-+..++|
T Consensus       211 ~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~f  247 (248)
T PF06977_consen  211 DRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLFYRF  247 (248)
T ss_dssp             STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEEEEE
T ss_pred             CCcccCcccccCCccEEEECCCCCEEEEc-CCceEEEe
Confidence            1         1245778999998766554 44444443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.10  E-value=0.064  Score=39.38  Aligned_cols=141  Identities=13%  Similarity=0.135  Sum_probs=80.1

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCC----CeeeeEecCCCC-CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         26 LSLAPDMRTFVSGACDASAKLWDIRD----GSCKQTFPGHES-DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~dg~v~~wd~~~----~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      ++.+.+|+.||.-- |..|-+--.+.    -.....++..+. .=+-++|+||+..|+.+...|+|+++|+...+.. ..
T Consensus         3 ~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf-~I   80 (282)
T PF15492_consen    3 LALSSDGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELF-VI   80 (282)
T ss_pred             eeecCCCcEEEEEe-ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeE-Ec
Confidence            45567777776654 65666654432    122333433332 2467999999999999999999999998754322 11


Q ss_pred             eec-----ceEeceEEEEECCC---C---cEEEEEcCCCeEEEEeCC--C---ceeee--eecCC-CccEEEEEEeCCCC
Q psy15417        101 SHD-----NIICGITSVAFSRS---G---RLLLAGYDDFNCNVWDSM--K---TERAG--ILAGH-DNRVSCLGVTEDGM  161 (176)
Q Consensus       101 ~~~-----~~~~~v~~~~~~~~---~---~~l~~g~~d~~i~v~d~~--~---~~~~~--~~~~~-~~~i~~~~~~~~~~  161 (176)
                      +..     .....|..+.|-+-   .   ..|++-...|.++-|-+.  +   .+...  .+..| ...|.++.++|...
T Consensus        81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~  160 (282)
T PF15492_consen   81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHR  160 (282)
T ss_pred             CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCC
Confidence            111     01122333333221   1   245555667666655431  1   11111  22233 55799999999987


Q ss_pred             EEEEccC
Q psy15417        162 AVATGSW  168 (176)
Q Consensus       162 ~l~tg~~  168 (176)
                      .|..||.
T Consensus       161 LLlVgG~  167 (282)
T PF15492_consen  161 LLLVGGC  167 (282)
T ss_pred             EEEEecc
Confidence            7766654

>KOG2079|consensus

Probab=97.07  E-value=0.0031  Score=53.67  Aligned_cols=67  Identities=18%  Similarity=0.353  Sum_probs=54.9

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEE---ccCCcEEEEeeCCCc
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF---FPNGWAFATGSDDAT   85 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~---~~~~~~l~s~s~d~~   85 (176)
                      -.++|.+++|+.+|..++.|-.+|.|.+||..+++..+.+..|..|+.++-+   ..++..+.++...|.
T Consensus       129 v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  129 VQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             cCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence            3478999999999999999999999999999999888888877777666544   345556788777775

>KOG2079|consensus

Probab=97.06  E-value=0.0046  Score=52.67  Aligned_cols=101  Identities=17%  Similarity=0.257  Sum_probs=69.5

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE-eecceEece
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY-SHDNIICGI  109 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~~~~~~~v  109 (176)
                      +..++.|+..|.+...|+..+-..-.-.. -.++|++++|+.+|..+..|-.+|.|.+||+...+..... .+..+..++
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v  178 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV  178 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence            44577888888888888765411101111 2589999999999999999999999999999876665443 233333445


Q ss_pred             EEEEECCCCcEEEEEcCCCeEEEEe
Q psy15417        110 TSVAFSRSGRLLLAGYDDFNCNVWD  134 (176)
Q Consensus       110 ~~~~~~~~~~~l~~g~~d~~i~v~d  134 (176)
                      -.+.+..++..++++...|.  +|.
T Consensus       179 i~v~~t~~nS~llt~D~~Gs--f~~  201 (1206)
T KOG2079|consen  179 IFVGRTSQNSKLLTSDTGGS--FWK  201 (1206)
T ss_pred             EEEEEeCCCcEEEEccCCCc--eEE
Confidence            55566666677888777664  454

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.03  E-value=0.089  Score=39.80  Aligned_cols=114  Identities=14%  Similarity=0.102  Sum_probs=69.9

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-eeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC-C
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRA-D   94 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~-~   94 (176)
                      ...++|+++.-- ++. |+.+. .+.+.+|++...+ ....-.- ....+.++..  .+..++.|.....+.++..+. +
T Consensus        86 ~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~  160 (321)
T PF03178_consen   86 EVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYDEEN  160 (321)
T ss_dssp             EESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEETTT
T ss_pred             eecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEEccC
Confidence            346889888865 333 44444 5789999998776 3332221 1224444444  466888888888888775443 2


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                      ..+.....+.....+.++.+-+++..++++..+|.+.++...
T Consensus       161 ~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  161 NKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             E-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             CEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            224444433333456777777565789999999999998743

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.01  E-value=0.049  Score=42.83  Aligned_cols=147  Identities=14%  Similarity=0.172  Sum_probs=72.1

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--CCCCeeE-----EEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--HESDINA-----VTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--h~~~v~~-----v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      +.+.++.|+.+..+ +.-..||+++++|+. |+....+..  ....|..     ..+..+|-.+.+.  ++.+.+-+-..
T Consensus        81 ~~iv~~~wt~~e~L-vvV~~dG~v~vy~~~-G~~~fsl~~~i~~~~v~e~~i~~~~~~~~GivvLt~--~~~~~~v~n~~  156 (410)
T PF04841_consen   81 GRIVGMGWTDDEEL-VVVQSDGTVRVYDLF-GEFQFSLGEEIEEEKVLECRIFAIWFYKNGIVVLTG--NNRFYVVNNID  156 (410)
T ss_pred             CCEEEEEECCCCeE-EEEEcCCEEEEEeCC-CceeechhhhccccCcccccccccccCCCCEEEECC--CCeEEEEeCcc
Confidence            78889999876554 455679999999986 333111111  1112222     2333345333333  33333322111


Q ss_pred             CC-eeeEE-eecc------eEeceEE-EEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE
Q psy15417         94 DQ-ELAMY-SHDN------IICGITS-VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        94 ~~-~~~~~-~~~~------~~~~v~~-~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      +. ..... ....      ....... ..++.+....+....++.+.+.+-...+.   + ...+++..+++||+++++|
T Consensus       157 ~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i-~~~~~i~~iavSpng~~iA  232 (410)
T PF04841_consen  157 EPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---I-DSDGPIIKIAVSPNGKFIA  232 (410)
T ss_pred             ccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---c-cCCCCeEEEEECCCCCEEE
Confidence            11 11110 0000      0000000 12333444444444455555443222111   1 1235789999999999999


Q ss_pred             EccCCCcEEEe
Q psy15417        165 TGSWDSFLRIW  175 (176)
Q Consensus       165 tg~~d~~v~vw  175 (176)
                      .-..+|.+.+.
T Consensus       233 l~t~~g~l~v~  243 (410)
T PF04841_consen  233 LFTDSGNLWVV  243 (410)
T ss_pred             EEECCCCEEEE
Confidence            88888887664

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG4649|consensus

Probab=96.89  E-value=0.1  Score=38.26  Aligned_cols=109  Identities=12%  Similarity=0.034  Sum_probs=77.3

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEE
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS  111 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~  111 (176)
                      ..+++.||..+.++.-|..+|+..+.--- ...+.+-+.. -|..++.|...|.+.+-+.++++....+.....+ ++ .
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~il-g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~v-k~-~   98 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL-GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETV-KV-R   98 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhh-CceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhh-cc-c
Confidence            45888999999999999999987764321 1223322222 3566888888999988888888766665544332 12 2


Q ss_pred             EEECCCCcEEEEEcCCCeEEEEeCCCceeeeee
Q psy15417        112 VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL  144 (176)
Q Consensus       112 ~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~  144 (176)
                      ....+++..+..|+.|++.+..|..+...+...
T Consensus        99 a~~d~~~glIycgshd~~~yalD~~~~~cVyks  131 (354)
T KOG4649|consen   99 AQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKS  131 (354)
T ss_pred             eEEcCCCceEEEecCCCcEEEecccccceEEec
Confidence            335678899999999999999998877666654

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.82  E-value=0.17  Score=41.73  Aligned_cols=153  Identities=20%  Similarity=0.188  Sum_probs=79.2

Q ss_pred             CccCeEEEEEcCCCCEEEEEe------CCCeEEEEEcCC-CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCc-EEEee
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGA------CDASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAFATGSDDAT-CRLFD   90 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s------~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~-i~iwd   90 (176)
                      ....+...+++|+++.++..-      .|+.-.||=... +.....+.+.  ....-.|+|+|..+.+.+.... +++.+
T Consensus       348 ~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~  425 (591)
T PRK13616        348 QMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIR  425 (591)
T ss_pred             cccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCC--CCCCceECCCCCceEEEecCcceEEEec
Confidence            334677889999998765554      244434443322 2222222332  3677889999887777754322 23322


Q ss_pred             CCCCCeeeEEeec------ceEeceEEEEECCCCcEEEEEcCCCeEEE---EeCCCceeee----ee-cCCCccEEEEEE
Q psy15417         91 IRADQELAMYSHD------NIICGITSVAFSRSGRLLLAGYDDFNCNV---WDSMKTERAG----IL-AGHDNRVSCLGV  156 (176)
Q Consensus        91 ~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~g~~d~~i~v---~d~~~~~~~~----~~-~~~~~~i~~~~~  156 (176)
                      -.....+......      .....|..+.|+|||..++... ++++.+   -....++...    .+ ..-...+..++|
T Consensus       426 ~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W  504 (591)
T PRK13616        426 DPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDW  504 (591)
T ss_pred             cCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceE
Confidence            1111111111110      1123588999999998766544 466666   3323343111    11 122233567889


Q ss_pred             eCCCCEEEEccCCCcEEEe
Q psy15417        157 TEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       157 ~~~~~~l~tg~~d~~v~vw  175 (176)
                      .+++..+ .+..++...+|
T Consensus       505 ~~~~~L~-V~~~~~~~~v~  522 (591)
T PRK13616        505 RTGDSLV-VGRSDPEHPVW  522 (591)
T ss_pred             ecCCEEE-EEecCCCCceE
Confidence            9887754 44444433333

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.71  E-value=0.12  Score=41.88  Aligned_cols=163  Identities=12%  Similarity=0.115  Sum_probs=88.6

Q ss_pred             cccccCCCcccCCCc--cCeEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC----cEE
Q psy15417          6 DKSALLGSPAASGHT--GDVMSLSLAPDMRTFVSGA--CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG----WAF   77 (176)
Q Consensus         6 ~~~~~~~~~~~~gh~--~~V~~~~~~~~~~~l~s~s--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~----~~l   77 (176)
                      .++.++++=-+.-|.  .+|..++|....+.++|.=  .+|.+++=|-   +.+..|.    -|.++.|.|-+    ..+
T Consensus         3 GkgkLLRTGlNaL~qAiHPvhGlaWTDGkqVvLT~L~l~~gE~kfGds---~viGqFE----hV~GlsW~P~~~~~~paL   75 (671)
T PF15390_consen    3 GKGKLLRTGLNALHQAIHPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS---KVIGQFE----HVHGLSWAPPCTADTPAL   75 (671)
T ss_pred             cccchhhcchHHHHhhhccccceEecCCCEEEEEeeeeeCCccccCCc---cEeeccc----eeeeeeecCcccCCCCce
Confidence            455666654443344  4788899974444555543  2344443321   2233333    48889999852    356


Q ss_pred             EEeeCCCcEEEeeCCC-----CCeeeEEe--e-cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC--ceeeeeecCC
Q psy15417         78 ATGSDDATCRLFDIRA-----DQELAMYS--H-DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK--TERAGILAGH  147 (176)
Q Consensus        78 ~s~s~d~~i~iwd~~~-----~~~~~~~~--~-~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~--~~~~~~~~~~  147 (176)
                      .+...-..|.+|.+.-     ++.+....  . +....-.+.+.|||...+|++=.....-.+++...  .+.-..+ .-
T Consensus        76 LAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~  154 (671)
T PF15390_consen   76 LAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI-KT  154 (671)
T ss_pred             EEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEec-cC
Confidence            6777778899999752     11111100  0 00000123567999988776644443333555322  2222223 34


Q ss_pred             CccEEEEEEeCCCCEEEEc-cCCCcEEEeC
Q psy15417        148 DNRVSCLGVTEDGMAVATG-SWDSFLRIWN  176 (176)
Q Consensus       148 ~~~i~~~~~~~~~~~l~tg-~~d~~v~vwd  176 (176)
                      .+.|.|.+|.+||..|+.+ +..=.-++||
T Consensus       155 ~G~IhCACWT~DG~RLVVAvGSsLHSyiWd  184 (671)
T PF15390_consen  155 SGLIHCACWTKDGQRLVVAVGSSLHSYIWD  184 (671)
T ss_pred             CceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence            5779999999999876433 2222457776

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.70  E-value=0.076  Score=41.93  Aligned_cols=143  Identities=15%  Similarity=0.134  Sum_probs=79.2

Q ss_pred             cCeEEEEEcCCCCEEEEE--eCC--CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcE-EEEeeCCCcEEEe--eCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSG--ACD--ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA-FATGSDDATCRLF--DIRA   93 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~--s~d--g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~s~d~~i~iw--d~~~   93 (176)
                      ..+..-.|+|+++.++--  ...  ..+.++|+++++....+. -.+.-..-+|+|+|+. +++...|+...+|  |+.+
T Consensus       193 ~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~  271 (425)
T COG0823         193 SLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDG  271 (425)
T ss_pred             cceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCC
Confidence            345566788887753222  112  358889998886444333 2223345689999865 5666777775554  6655


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEE-EcCCCe--EEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLA-GYDDFN--CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-g~~d~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      .+...........   ..=.|+|||+.++- ....|.  |.+++.+...... +......-..-.++|+|.+|+..+.
T Consensus       272 ~~~~~Lt~~~gi~---~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~r-iT~~~~~~~~p~~SpdG~~i~~~~~  345 (425)
T COG0823         272 KNLPRLTNGFGIN---TSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTR-LTFSGGGNSNPVWSPDGDKIVFESS  345 (425)
T ss_pred             CcceecccCCccc---cCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeE-eeccCCCCcCccCCCCCCEEEEEec
Confidence            4432222221111   13358999986644 444554  5556655544322 2111111125568999999876653

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.64  E-value=0.23  Score=38.92  Aligned_cols=112  Identities=15%  Similarity=0.190  Sum_probs=66.5

Q ss_pred             EEEEEcCCCCEEEEE-eCCC----eEEEEEcCCCeeeeEe-cCCCCCeeEEEEccCCcEEEEeeCCC-----------cE
Q psy15417         24 MSLSLAPDMRTFVSG-ACDA----SAKLWDIRDGSCKQTF-PGHESDINAVTFFPNGWAFATGSDDA-----------TC   86 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~-s~dg----~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~-----------~i   86 (176)
                      ....++|++++++-+ +..|    +++++|+++++.+... .. .. -..+.|.++++.|+-...+.           .|
T Consensus       127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~-~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v  204 (414)
T PF02897_consen  127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PK-FSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV  204 (414)
T ss_dssp             EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EE-SEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred             eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cc-cceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence            357889999977644 3434    3899999999765532 22 11 22399999988776665443           26


Q ss_pred             EEeeCCCCCee--eEEeecceEeceEEEEECCCCcEEEEEc---CC-CeEEEEeCCC
Q psy15417         87 RLFDIRADQEL--AMYSHDNIICGITSVAFSRSGRLLLAGY---DD-FNCNVWDSMK  137 (176)
Q Consensus        87 ~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~d-~~i~v~d~~~  137 (176)
                      ..|.+.++..-  ..++......-...+..++++++++...   .+ ..+.+.++..
T Consensus       205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~  261 (414)
T PF02897_consen  205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDD  261 (414)
T ss_dssp             EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCC
T ss_pred             EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccc
Confidence            77887765433  3443322211134577889998876532   22 3466777655

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.63  E-value=0.22  Score=38.54  Aligned_cols=144  Identities=13%  Similarity=0.108  Sum_probs=76.8

Q ss_pred             cCeEEEEEcCCCCEEEEEe-----------CCC-eEEEEEcCC--Ce--eeeEecCCCCCeeEEEEccCCcEEEEeeCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGA-----------CDA-SAKLWDIRD--GS--CKQTFPGHESDINAVTFFPNGWAFATGSDDA   84 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s-----------~dg-~v~~wd~~~--~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~   84 (176)
                      .....|+|.++|+++++-.           ..+ .|.+++-..  ++  ....+...-...+++++.+++ .+++ ....
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~-~~~~   91 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVA-TPPD   91 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEe-CCCe
Confidence            3445799999999877643           223 677666432  32  233444333456889999988 4444 4443


Q ss_pred             cEEEeeCCCC-----CeeeE---Eeecc--eEeceEEEEECCCCcEEEEEcCC-------------------CeEEEEeC
Q psy15417         85 TCRLFDIRAD-----QELAM---YSHDN--IICGITSVAFSRSGRLLLAGYDD-------------------FNCNVWDS  135 (176)
Q Consensus        85 ~i~iwd~~~~-----~~~~~---~~~~~--~~~~v~~~~~~~~~~~l~~g~~d-------------------~~i~v~d~  135 (176)
                      -.++.|...+     +....   +....  .....+.+.|.|||.++++-+..                   +.+.-++.
T Consensus        92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p  171 (367)
T TIGR02604        92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP  171 (367)
T ss_pred             EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEec
Confidence            3334344221     11111   11110  11235678999999877654311                   33444554


Q ss_pred             CCceeeeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417        136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus       136 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      ..++....-.++.+ ...++|+++|..+++-.
T Consensus       172 dg~~~e~~a~G~rn-p~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       172 DGGKLRVVAHGFQN-PYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             CCCeEEEEecCcCC-CccceECCCCCEEEEcc
Confidence            43333222223332 35788999888876643

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG4499|consensus

Probab=96.60  E-value=0.16  Score=36.66  Aligned_cols=144  Identities=11%  Similarity=0.115  Sum_probs=86.4

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCC--------eeEEEEccCCcEE-EEeeCCCcEEEee--
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD--------INAVTFFPNGWAF-ATGSDDATCRLFD--   90 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~--------v~~v~~~~~~~~l-~s~s~d~~i~iwd--   90 (176)
                      ..+.-..+|+|++ ..|.+.-.-..+....+++-.-+.+|.-.        -++++|+.+.+.+ +.=+.+-.|.-||  
T Consensus       110 R~NDgkvdP~Gry-y~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd  188 (310)
T KOG4499|consen  110 RLNDGKVDPDGRY-YGGTMADFGDDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYD  188 (310)
T ss_pred             ccccCccCCCCce-eeeeeccccccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeeeecC
Confidence            3445556788887 44444322224444445554455555421        2568888776654 4445666777787  


Q ss_pred             CCCCCee---eEEee------cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC-C-
Q psy15417         91 IRADQEL---AMYSH------DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-D-  159 (176)
Q Consensus        91 ~~~~~~~---~~~~~------~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~-  159 (176)
                      ..+++..   ..+..      ++..  .--.++..+|.++++....+++...|..+++.+.++.-...++++++|-- + 
T Consensus       189 ~~tG~~snr~~i~dlrk~~~~e~~~--PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGkn~  266 (310)
T KOG4499|consen  189 CPTGDLSNRKVIFDLRKSQPFESLE--PDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGKNL  266 (310)
T ss_pred             CCcccccCcceeEEeccCCCcCCCC--CCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCCCc
Confidence            4443321   11111      1111  11234456889999999999999999999999998887788999999963 2 


Q ss_pred             CCEEEEccC
Q psy15417        160 GMAVATGSW  168 (176)
Q Consensus       160 ~~~l~tg~~  168 (176)
                      ..+.+|+..
T Consensus       267 d~~yvT~aa  275 (310)
T KOG4499|consen  267 DILYVTTAA  275 (310)
T ss_pred             cEEEEEehh
Confidence            233445543

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.58  E-value=0.21  Score=37.75  Aligned_cols=146  Identities=14%  Similarity=0.126  Sum_probs=83.0

Q ss_pred             CeEEEEEcCCCCEEEEEeC-----C----CeEEEEEcC-CCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEee
Q psy15417         22 DVMSLSLAPDMRTFVSGAC-----D----ASAKLWDIR-DGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFD   90 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~-----d----g~v~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd   90 (176)
                      .-+.....|+|.+-++--.     .    ..=.+|-+. .+...+.+..+-..-|+++|+|+++.++.+-. .+.|.-++
T Consensus       112 r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~  191 (307)
T COG3386         112 RPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYD  191 (307)
T ss_pred             CCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEe
Confidence            3456667788776555433     0    111355554 45555555555555689999999977766654 36677776


Q ss_pred             CCC--CC---eeeEEeecceEeceEEEEECCCCcEEEEEcCCC-eEEEEeCCCceeeeeecCCCccEEEEEEe-CCCCEE
Q psy15417         91 IRA--DQ---ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF-NCNVWDSMKTERAGILAGHDNRVSCLGVT-EDGMAV  163 (176)
Q Consensus        91 ~~~--~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~-~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l  163 (176)
                      +..  ..   .....-........-.++...+|.+.+++..+| .+.+|+.. ++++..+.-....+.+++|- |+.+.|
T Consensus       192 ~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L  270 (307)
T COG3386         192 LDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTL  270 (307)
T ss_pred             cCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEE
Confidence            542  11   110111111111122355667888775554444 89999965 88877776665777888885 333443


Q ss_pred             -EEccC
Q psy15417        164 -ATGSW  168 (176)
Q Consensus       164 -~tg~~  168 (176)
                       +|...
T Consensus       271 ~iTs~~  276 (307)
T COG3386         271 YITSAR  276 (307)
T ss_pred             EEEecC
Confidence             44433

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=96.56  E-value=0.18  Score=36.81  Aligned_cols=160  Identities=16%  Similarity=0.138  Sum_probs=88.8

Q ss_pred             ccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCC-CCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      +++|-...++.++|+|+.. ++++....+.|.-++. +|+.++.++-. .+-..+|++..++.++++.-+++.+.++++.
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~   94 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID   94 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence            4566677799999999755 6677777777877886 47777766543 3568899998888877777678889888874


Q ss_pred             CCCe---ee---EEe--ec-ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC---ceee--eee------cCCCccEE
Q psy15417         93 ADQE---LA---MYS--HD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK---TERA--GIL------AGHDNRVS  152 (176)
Q Consensus        93 ~~~~---~~---~~~--~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~---~~~~--~~~------~~~~~~i~  152 (176)
                      ....   ..   .+.  .. ....++=.++|+|.+..|+.+-.....++|.+..   ....  ...      ......++
T Consensus        95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S  174 (248)
T PF06977_consen   95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS  174 (248)
T ss_dssp             ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred             ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence            3211   11   111  11 1112345688999877777776666666665432   1111  111      11234578


Q ss_pred             EEEEeCC-CCEEEEccCCCcEEEe
Q psy15417        153 CLGVTED-GMAVATGSWDSFLRIW  175 (176)
Q Consensus       153 ~~~~~~~-~~~l~tg~~d~~v~vw  175 (176)
                      .+++.|. +.+++....++.+..+
T Consensus       175 ~l~~~p~t~~lliLS~es~~l~~~  198 (248)
T PF06977_consen  175 GLSYDPRTGHLLILSDESRLLLEL  198 (248)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEE
T ss_pred             ceEEcCCCCeEEEEECCCCeEEEE
Confidence            8889886 4555565556555544

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PHA02713 hypothetical protein; Provisional

Probab=96.48  E-value=0.12  Score=42.30  Aligned_cols=133  Identities=8%  Similarity=0.055  Sum_probs=66.8

Q ss_pred             CCCEEEEEeCCC-----eEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEeeCCC-------------------
Q psy15417         31 DMRTFVSGACDA-----SAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDDA-------------------   84 (176)
Q Consensus        31 ~~~~l~s~s~dg-----~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-------------------   84 (176)
                      ++++.+.|+.++     ++..||..+.+  ....++........+.  -+++.++.||.++                   
T Consensus       351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~  428 (557)
T PHA02713        351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT  428 (557)
T ss_pred             CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccc
Confidence            566777777654     37789987653  1222221111112222  2677788887653                   


Q ss_pred             ----cEEEeeCCCCCeeeEEeec-ceEeceEEEEECCCCcEEEEEcCC------CeEEEEeCCC-c--eeeeeecCCCcc
Q psy15417         85 ----TCRLFDIRADQELAMYSHD-NIICGITSVAFSRSGRLLLAGYDD------FNCNVWDSMK-T--ERAGILAGHDNR  150 (176)
Q Consensus        85 ----~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d------~~i~v~d~~~-~--~~~~~~~~~~~~  150 (176)
                          .+..||.++++ ....... ........+.+  ++.+++.|+.+      ..+..||.++ .  +.+..++.....
T Consensus       429 ~~~~~ve~YDP~td~-W~~v~~m~~~r~~~~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~  505 (557)
T PHA02713        429 HSSNKVIRYDTVNNI-WETLPNFWTGTIRPGVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSA  505 (557)
T ss_pred             cccceEEEECCCCCe-EeecCCCCcccccCcEEEE--CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccccc
Confidence                35567765432 2111111 11111112222  56777777654      2356788765 2  333344332222


Q ss_pred             EEEEEEeCCCCEEEEccCCC
Q psy15417        151 VSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus       151 i~~~~~~~~~~~l~tg~~d~  170 (176)
                      . .++.. ++...+.||.|+
T Consensus       506 ~-~~~~~-~~~iyv~Gg~~~  523 (557)
T PHA02713        506 L-HTILH-DNTIMMLHCYES  523 (557)
T ss_pred             c-eeEEE-CCEEEEEeeecc
Confidence            2 22232 567888999887

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.46  E-value=0.0088  Score=31.74  Aligned_cols=28  Identities=25%  Similarity=0.357  Sum_probs=25.3

Q ss_pred             CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        148 DNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       148 ~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ...|.+++|+|....||.|..+|.|.++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~   38 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVY   38 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEE
Confidence            3568899999999999999999999886

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.41  E-value=0.076  Score=41.92  Aligned_cols=110  Identities=15%  Similarity=0.170  Sum_probs=60.7

Q ss_pred             EEEEcCCCCEE-EEEeCCCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcE-EEEeeCCCcEEEe--eCCCCCeee
Q psy15417         25 SLSLAPDMRTF-VSGACDAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA-FATGSDDATCRLF--DIRADQELA   98 (176)
Q Consensus        25 ~~~~~~~~~~l-~s~s~dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~s~d~~i~iw--d~~~~~~~~   98 (176)
                      .-+|+|||+.| ++...||.  |.+.|+.+....+ +..-.+.-..-.|+|+|+. +++.+..|.-.||  ++...+. .
T Consensus       242 ~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~  319 (425)
T COG0823         242 APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-T  319 (425)
T ss_pred             CccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-e
Confidence            46799999855 55555666  4566777665333 4433333336678999876 4556666665554  4443332 2


Q ss_pred             EEeecceEeceEEEEECCCCcEEEEEcC-CCe--EEEEeCCCc
Q psy15417         99 MYSHDNIICGITSVAFSRSGRLLLAGYD-DFN--CNVWDSMKT  138 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d~~--i~v~d~~~~  138 (176)
                      .......  .-..-.++|||..++..+. +|.  +-+.|...+
T Consensus       320 riT~~~~--~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~  360 (425)
T COG0823         320 RLTFSGG--GNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASG  360 (425)
T ss_pred             EeeccCC--CCcCccCCCCCCEEEEEeccCCceeeEEeccCCC
Confidence            1111111  1113568999988766553 343  445554443

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=96.22  E-value=0.31  Score=35.83  Aligned_cols=135  Identities=13%  Similarity=0.092  Sum_probs=74.1

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe--------
Q psy15417         30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS--------  101 (176)
Q Consensus        30 ~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--------  101 (176)
                      ..++.|+.|+.+| +.+++.........+. +..+|..+...|+-+.++.-+ |+.+.++++..-.......        
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~   81 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR   81 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence            4577899999888 8999983322222222 233499999998877666665 4999999986433222100        


Q ss_pred             ----ecceEeceEEEE--ECCCCcEEEEEcCCCeEEEEeCCCc-----eeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417        102 ----HDNIICGITSVA--FSRSGRLLLAGYDDFNCNVWDSMKT-----ERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus       102 ----~~~~~~~v~~~~--~~~~~~~l~~g~~d~~i~v~d~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                          ......++..++  -.+.+...++....+++.+|.....     +...++. -...+..++|.+  +.++.|..++
T Consensus        82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~~--~~i~v~~~~~  158 (275)
T PF00780_consen   82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFLG--NKICVGTSKG  158 (275)
T ss_pred             cccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEeC--CEEEEEeCCc
Confidence                011112334333  1123333333334558888764432     2333333 235667788873  4555555444

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=96.10  E-value=0.57  Score=37.78  Aligned_cols=142  Identities=15%  Similarity=0.176  Sum_probs=81.3

Q ss_pred             EEcCCCCEEEEEeCCC------------------eEEEEEcCCCeeeeEecC--CCC----CeeEEEEc----cCCc---
Q psy15417         27 SLAPDMRTFVSGACDA------------------SAKLWDIRDGSCKQTFPG--HES----DINAVTFF----PNGW---   75 (176)
Q Consensus        27 ~~~~~~~~l~s~s~dg------------------~v~~wd~~~~~~~~~~~~--h~~----~v~~v~~~----~~~~---   75 (176)
                      .+.+.+..++.++.++                  .+.-+|.++|+.+..++.  |..    ......+.    -++.   
T Consensus       223 a~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~  302 (488)
T cd00216         223 TYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVP  302 (488)
T ss_pred             eEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeE
Confidence            4445566777777665                  789999999999888753  210    00111111    1232   


Q ss_pred             EEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEE-----------------cCCCeEEEEeCCCc
Q psy15417         76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG-----------------YDDFNCNVWDSMKT  138 (176)
Q Consensus        76 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g-----------------~~d~~i~v~d~~~~  138 (176)
                      .++.++.+|.+...|.++++.+.......     ..+...| +.+++..                 ..++.+.-.|..++
T Consensus       303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~~-----~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG  376 (488)
T cd00216         303 AIVHAPKNGFFYVLDRTTGKLISARPEVE-----QPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTG  376 (488)
T ss_pred             EEEEECCCceEEEEECCCCcEeeEeEeec-----cccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCC
Confidence            57788889999999999988765443221     0122333 2222211                 23567777887777


Q ss_pred             eeeeeecCCC--------ccE--EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        139 ERAGILAGHD--------NRV--SCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       139 ~~~~~~~~~~--------~~i--~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.+.......        ...  ..++.  .+..|..|+.|+.++.+|
T Consensus       377 ~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald  422 (488)
T cd00216         377 KVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFD  422 (488)
T ss_pred             cEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEE
Confidence            7666554220        111  11222  345777888888887664

The alignment model contains an 8-bladed beta-propeller.

>KOG2444|consensus

Probab=96.09  E-value=0.035  Score=39.57  Aligned_cols=105  Identities=14%  Similarity=0.137  Sum_probs=58.6

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeee-EecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEece
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQ-TFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGI  109 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v  109 (176)
                      +..++.|+.+|.|.+|+.+-..... .+.. -..-.+.+.-..++.+..++++|+.|+.|+++-...+....+... .+.
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~-~~~  148 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF-ESG  148 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccC-CCc
Confidence            4578899999999999886221111 1111 111122233334566889999999999999876554433222111 112


Q ss_pred             EEEEECCCCcEEEEE--cCCCeEEEEeCCC
Q psy15417        110 TSVAFSRSGRLLLAG--YDDFNCNVWDSMK  137 (176)
Q Consensus       110 ~~~~~~~~~~~l~~g--~~d~~i~v~d~~~  137 (176)
                      ........+..+...  +.+..++.|+++.
T Consensus       149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  149 EELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             ceeEEecCCceEEeeccccchhhhhcchhh
Confidence            222222334455554  6677777787653

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.08  E-value=0.55  Score=37.40  Aligned_cols=128  Identities=12%  Similarity=0.033  Sum_probs=67.1

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC------------CeeeE
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD------------QELAM   99 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~------------~~~~~   99 (176)
                      |.+|+..+.+ .|.+||+.+++.++.+...  +|..+.|++++.+++-.+.+ .+.+.+...+            .....
T Consensus       117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~  192 (443)
T PF04053_consen  117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELI  192 (443)
T ss_dssp             SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEE
T ss_pred             CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEE
Confidence            7777666644 8999999999999988743  48999999999998888765 6666553322            11111


Q ss_pred             EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417        100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      .+.   ...|.+..|.-+  .++-.+.+ .++.+-  .++.  +..+   ..++.-+.+.++.+.+...-.|+.+..
T Consensus       193 ~E~---~~~IkSg~W~~d--~fiYtT~~-~lkYl~--~Ge~~~i~~l---d~~~yllgy~~~~~~ly~~Dr~~~v~~  258 (443)
T PF04053_consen  193 HEI---SERIKSGCWVED--CFIYTTSN-HLKYLV--NGETGIIAHL---DKPLYLLGYLPKENRLYLIDRDGNVIS  258 (443)
T ss_dssp             EEE----S--SEEEEETT--EEEEE-TT-EEEEEE--TTEEEEEEE----SS--EEEEEETTTTEEEEE-TT--EEE
T ss_pred             EEe---cceeEEEEEEcC--EEEEEcCC-eEEEEE--cCCcceEEEc---CCceEEEEEEccCCEEEEEECCCCEEE
Confidence            111   134666778655  34333344 665532  3332  2222   345566677776666666666666654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PHA02713 hypothetical protein; Provisional

Probab=96.05  E-value=0.49  Score=38.86  Aligned_cols=93  Identities=11%  Similarity=0.155  Sum_probs=45.9

Q ss_pred             CCCEEEEEeCC------CeEEEEEcCCCeeeeEecCCCCCe-eEEEEccCCcEEEEeeCCC-----cEEEeeCCCCCeee
Q psy15417         31 DMRTFVSGACD------ASAKLWDIRDGSCKQTFPGHESDI-NAVTFFPNGWAFATGSDDA-----TCRLFDIRADQELA   98 (176)
Q Consensus        31 ~~~~l~s~s~d------g~v~~wd~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~~~~~   98 (176)
                      ++.+++.|+.+      ..+..||..+.+- ..++....+- ......-+++.++.||.++     ++..||..++ ...
T Consensus       303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W-~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~-~W~  380 (557)
T PHA02713        303 DNEIIIAGGYNFNNPSLNKVYKINIENKIH-VELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDD-KWK  380 (557)
T ss_pred             CCEEEEEcCCCCCCCccceEEEEECCCCeE-eeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCC-eEE
Confidence            56677777753      3466788876631 1122111111 1112223677888888764     3777887654 222


Q ss_pred             EEee-cceEeceEEEEECCCCcEEEEEcCC
Q psy15417         99 MYSH-DNIICGITSVAFSRSGRLLLAGYDD  127 (176)
Q Consensus        99 ~~~~-~~~~~~v~~~~~~~~~~~l~~g~~d  127 (176)
                      .... .........+.+  ++.+++.|+.+
T Consensus       381 ~~~~mp~~r~~~~~~~~--~g~IYviGG~~  408 (557)
T PHA02713        381 MLPDMPIALSSYGMCVL--DQYIYIIGGRT  408 (557)
T ss_pred             ECCCCCcccccccEEEE--CCEEEEEeCCC
Confidence            2111 111111222232  67888887754

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=95.97  E-value=0.66  Score=37.41  Aligned_cols=111  Identities=9%  Similarity=0.108  Sum_probs=67.6

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC------Ce--eEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHES------DI--NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~------~v--~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~  103 (176)
                      +..++.++.++.+..+|.++++.+..+.....      .+  ..+.+. ++..++.++.++.+.-+|.++++.+..+...
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            34566777889999999999998887754322      01  011111 2256777888999999999998877655443


Q ss_pred             ceE---ece-EEEEECCCCcEEEEEc---------CCCeEEEEeCCCceeeeeec
Q psy15417        104 NII---CGI-TSVAFSRSGRLLLAGY---------DDFNCNVWDSMKTERAGILA  145 (176)
Q Consensus       104 ~~~---~~v-~~~~~~~~~~~l~~g~---------~d~~i~v~d~~~~~~~~~~~  145 (176)
                      ...   ..+ ....+. + ..++.++         .++.+.-+|..+++......
T Consensus       140 ~~~~~~~~i~ssP~v~-~-~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~  192 (488)
T cd00216         140 DQVPPGYTMTGAPTIV-K-KLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFY  192 (488)
T ss_pred             CCcCcceEecCCCEEE-C-CEEEEeccccccccCCCCcEEEEEECCCCceeeEee
Confidence            220   000 111121 2 3344443         35778888988887766553

The alignment model contains an 8-bladed beta-propeller.

>KOG4649|consensus

Probab=95.93  E-value=0.44  Score=35.02  Aligned_cols=98  Identities=12%  Similarity=0.018  Sum_probs=64.6

Q ss_pred             CcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEE
Q psy15417         74 GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVS  152 (176)
Q Consensus        74 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~  152 (176)
                      ..+++.||..+.+.--|..++....+-.....+. ...+.   =+..++.|..++.+++.+..++++...+..... +++
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE-~sa~v---vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~   98 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIE-CSAIV---VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR   98 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhhCceee-eeeEE---ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc
Confidence            4577888888888888887776543322222211 11222   246788999999999999999877776654322 232


Q ss_pred             EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        153 CLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                       ....+++..+..|+.|++.+.-|
T Consensus        99 -a~~d~~~glIycgshd~~~yalD  121 (354)
T KOG4649|consen   99 -AQCDFDGGLIYCGSHDGNFYALD  121 (354)
T ss_pred             -eEEcCCCceEEEecCCCcEEEec
Confidence             23456788999999999887543

>PRK13684 Ycf48-like protein; Provisional

Probab=95.76  E-value=0.64  Score=35.57  Aligned_cols=150  Identities=11%  Similarity=0.087  Sum_probs=79.1

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEE-EEcCCCeeeeEe-cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKL-WDIRDGSCKQTF-PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~-wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      .+.+.++.+.+++.+++++. .|.+.. +|-. ++.=... ..-...++++.+.+++..++.+ ..|.+.+=....+...
T Consensus       172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~g-g~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW  248 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEPG-QTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESW  248 (334)
T ss_pred             cceEEEEEECCCCeEEEEeC-CceEEEEcCCC-CCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCcc
Confidence            45678899998877665554 565442 2211 1111111 1234678899999988766654 5566653222232222


Q ss_pred             eEEeec--ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec---CCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         98 AMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA---GHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        98 ~~~~~~--~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ......  .....+..+.+.|++..+++| .+|.+. .....++.-....   .-......+.|..++..+++| ..|.|
T Consensus       249 ~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~G~i  325 (334)
T PRK13684        249 SKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLG-QRGVL  325 (334)
T ss_pred             ccccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEEC-CCceE
Confidence            211111  011246678888888776665 456553 3323332222221   122346677777666666655 66777


Q ss_pred             EEe
Q psy15417        173 RIW  175 (176)
Q Consensus       173 ~vw  175 (176)
                      .-|
T Consensus       326 l~~  328 (334)
T PRK13684        326 LRY  328 (334)
T ss_pred             EEe
Confidence            655

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.76  E-value=0.96  Score=37.57  Aligned_cols=98  Identities=13%  Similarity=0.108  Sum_probs=56.0

Q ss_pred             EEEEeeCC-CcEEEeeCCCCCeeeEEeecceEeceEEEEE--CCCCcEEEEEcCCCeEEEEeCCC---------ceeeee
Q psy15417         76 AFATGSDD-ATCRLFDIRADQELAMYSHDNIICGITSVAF--SRSGRLLLAGYDDFNCNVWDSMK---------TERAGI  143 (176)
Q Consensus        76 ~l~s~s~d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~g~~d~~i~v~d~~~---------~~~~~~  143 (176)
                      .++....+ ..+.|||.+.........+. ....|..+.|  .|+++.+++-+-...+.++.-.+         ..++..
T Consensus        42 k~a~V~~~~~~LtIWD~~~~~lE~~~~f~-~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~  120 (631)
T PF12234_consen   42 KIAVVDSSRSELTIWDTRSGVLEYEESFS-EDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRK  120 (631)
T ss_pred             cEEEEECCCCEEEEEEcCCcEEEEeeeec-CCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEE
Confidence            34444444 46999999876643332331 1234666665  45777776666677888886322         112222


Q ss_pred             --ecCCC-ccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        144 --LAGHD-NRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       144 --~~~~~-~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                        +..+. .+|....|.++|..++..|  .++.|+|
T Consensus       121 i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~d  154 (631)
T PF12234_consen  121 IDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFD  154 (631)
T ss_pred             EEeecCCCCCccceeEecCCeEEEEeC--CEEEEEC
Confidence              23343 3577788999886654443  3566664

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=95.75  E-value=0.73  Score=36.16  Aligned_cols=159  Identities=16%  Similarity=0.197  Sum_probs=84.8

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE--ecC------CCCCeeEEEEcc-----CC---cEEEE
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT--FPG------HESDINAVTFFP-----NG---WAFAT   79 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~--~~~------h~~~v~~v~~~~-----~~---~~l~s   79 (176)
                      +....++|++++.| |=.+++.|+.+|.+.+.|++....+..  +..      ....|+++.|..     |+   -.++.
T Consensus        82 ~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v  160 (395)
T PF08596_consen   82 LDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV  160 (395)
T ss_dssp             E---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred             eeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence            34457999999986 677999999999999999987765543  222      234577787762     33   46889


Q ss_pred             eeCCCcEEEeeCC--CCCee-eEEe-ec-ceEeceEEEE-ECCC-----------------C---cEEEEEcCCCeEEEE
Q psy15417         80 GSDDATCRLFDIR--ADQEL-AMYS-HD-NIICGITSVA-FSRS-----------------G---RLLLAGYDDFNCNVW  133 (176)
Q Consensus        80 ~s~d~~i~iwd~~--~~~~~-~~~~-~~-~~~~~v~~~~-~~~~-----------------~---~~l~~g~~d~~i~v~  133 (176)
                      |...|.+.+|.+.  ++... ..+. .. ....++..+. ++.+                 +   +-++....+..+|++
T Consensus       161 GTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~  240 (395)
T PF08596_consen  161 GTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVF  240 (395)
T ss_dssp             EETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE
T ss_pred             EeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEE
Confidence            9999999999764  21111 1111 10 1111121111 2111                 0   113333446689999


Q ss_pred             eCCCceeeeeecCCCccEEEEEEe-----CCCCEEEEccCCCcEEEe
Q psy15417        134 DSMKTERAGILAGHDNRVSCLGVT-----EDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       134 d~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~l~tg~~d~~v~vw  175 (176)
                      ...+.+..............+.+.     ..+..|+.-..+|.+++|
T Consensus       241 ~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~  287 (395)
T PF08596_consen  241 KPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIY  287 (395)
T ss_dssp             -TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEE
T ss_pred             eCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEE
Confidence            877766544443222223334442     346677888889999986

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG4441|consensus

Probab=95.69  E-value=0.63  Score=38.33  Aligned_cols=135  Identities=19%  Similarity=0.204  Sum_probs=69.9

Q ss_pred             CCCEEEEEeCCC------eEEEEEcCCCeeee--EecCCCCCeeEEEEccCCcEEEEeeCC-C-----cEEEeeCCCCCe
Q psy15417         31 DMRTFVSGACDA------SAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDD-A-----TCRLFDIRADQE   96 (176)
Q Consensus        31 ~~~~l~s~s~dg------~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d-~-----~i~iwd~~~~~~   96 (176)
                      .+.+++.|+.++      .+..||..+++-..  .++ ......++++. ++..+++||.| +     ++..||.+.++ 
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~-  360 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQ-  360 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCc-
Confidence            456677777774      57889988774222  222 11222334443 56789999998 2     46667776654 


Q ss_pred             eeEEeecc-eEeceEEEEECCCCcEEEEEcCCCe-----EEEEeCCCceeeeeecCCCccEEEEE-EeCCCCEEEEccCC
Q psy15417         97 LAMYSHDN-IICGITSVAFSRSGRLLLAGYDDFN-----CNVWDSMKTERAGILAGHDNRVSCLG-VTEDGMAVATGSWD  169 (176)
Q Consensus        97 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~g~~d~~-----i~v~d~~~~~~~~~~~~~~~~i~~~~-~~~~~~~l~tg~~d  169 (176)
                      +....... .........  -+|.++++|+.||.     +-.||..+.+.. ....+.......+ ..-+|...+.||.|
T Consensus       361 W~~~a~M~~~R~~~~v~~--l~g~iYavGG~dg~~~l~svE~YDp~~~~W~-~va~m~~~r~~~gv~~~~g~iYi~GG~~  437 (571)
T KOG4441|consen  361 WTPVAPMNTKRSDFGVAV--LDGKLYAVGGFDGEKSLNSVECYDPVTNKWT-PVAPMLTRRSGHGVAVLGGKLYIIGGGD  437 (571)
T ss_pred             eeccCCccCccccceeEE--ECCEEEEEeccccccccccEEEecCCCCccc-ccCCCCcceeeeEEEEECCEEEEEcCcC
Confidence            22222111 111111122  27888999998875     445664432211 1111111222222 22357777888877


Q ss_pred             Cc
Q psy15417        170 SF  171 (176)
Q Consensus       170 ~~  171 (176)
                      +.
T Consensus       438 ~~  439 (571)
T KOG4441|consen  438 GS  439 (571)
T ss_pred             CC
Confidence            64

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.68  E-value=0.09  Score=27.21  Aligned_cols=32  Identities=16%  Similarity=0.271  Sum_probs=25.7

Q ss_pred             cCeEEEEEcCCC---CEEEEEeCCCeEEEEEcCCC
Q psy15417         21 GDVMSLSLAPDM---RTFVSGACDASAKLWDIRDG   52 (176)
Q Consensus        21 ~~V~~~~~~~~~---~~l~s~s~dg~v~~wd~~~~   52 (176)
                      +.|.++.|+|+.   .+|+-+-..+.|.++|++++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            468899999854   47877777888999999853

It contains a characteristic DLL sequence motif.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.68  E-value=0.64  Score=35.05  Aligned_cols=106  Identities=17%  Similarity=0.107  Sum_probs=57.0

Q ss_pred             CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEe-CCCce
Q psy15417         61 HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD-SMKTE  139 (176)
Q Consensus        61 h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d-~~~~~  139 (176)
                      -.+.++.+...++|.+++.++......-||.... ....+.... ..+++.+.|.|++.+.+++ ..+.++.=+ ....+
T Consensus       143 ~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~-~w~~~~r~~-~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~  219 (302)
T PF14870_consen  143 TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQT-TWQPHNRNS-SRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGE  219 (302)
T ss_dssp             ----EEEEEE-TTS-EEEEETTSSEEEEE-TT-S-S-EEEE--S-SS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEE
T ss_pred             CcceeEeEEECCCCcEEEEECcccEEEEecCCCc-cceEEccCc-cceehhceecCCCCEEEEe-CCcEEEEccCCCCcc
Confidence            3467888888999998888877777778875321 222222221 2478999999998876655 778887766 12222


Q ss_pred             eeee--ec--CCCccEEEEEEeCCCCEEEEccCC
Q psy15417        140 RAGI--LA--GHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus       140 ~~~~--~~--~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      ....  .+  .-...+..+++.+++...|+|+..
T Consensus       220 ~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G  253 (302)
T PF14870_consen  220 TWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG  253 (302)
T ss_dssp             EE---B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred             ccccccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence            2111  11  122347889999887777766543

>PRK13616 lipoprotein LpqB; Provisional

Probab=95.52  E-value=0.52  Score=38.98  Aligned_cols=125  Identities=14%  Similarity=0.059  Sum_probs=65.3

Q ss_pred             CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee------CCCcEEEe--eCCCCCeeeEEeecceEeceEEE
Q psy15417         41 DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS------DDATCRLF--DIRADQELAMYSHDNIICGITSV  112 (176)
Q Consensus        41 dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s------~d~~i~iw--d~~~~~~~~~~~~~~~~~~v~~~  112 (176)
                      +|.+.-.+-...+.+....+....+.+.+++|+|..++...      .|..-.+|  +.... . ...-...   ....-
T Consensus       328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~-~-~~lt~g~---~~t~P  402 (591)
T PRK13616        328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV-A-VQVLEGH---SLTRP  402 (591)
T ss_pred             CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc-c-eeeecCC---CCCCc
Confidence            66665544322222222223334678899999998876665      24443444  44222 2 1111111   24456


Q ss_pred             EECCCCcEEEEEcCC------------CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417        113 AFSRSGRLLLAGYDD------------FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       113 ~~~~~~~~l~~g~~d------------~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      .|+|+|..+.+....            +.+.+.++..++...   ...+.|..+.|+|||..++.-. +++|.+
T Consensus       403 sWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        403 SWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             eECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence            799997755554322            223333333322211   2245699999999999877554 355543

>KOG2395|consensus

Probab=95.46  E-value=0.19  Score=40.26  Aligned_cols=97  Identities=19%  Similarity=0.326  Sum_probs=64.5

Q ss_pred             EEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCc-------EEEEEcCCCeEEEEeCCCce--eeeeecC
Q psy15417         76 AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-------LLLAGYDDFNCNVWDSMKTE--RAGILAG  146 (176)
Q Consensus        76 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~g~~d~~i~v~d~~~~~--~~~~~~~  146 (176)
                      .|.++.....+..-|++.++.+..|.+...   |+-+.+.|+..       .-+.|-.+..+.-||.+-.-  .+..-.+
T Consensus       348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d---i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~  424 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD---INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQS  424 (644)
T ss_pred             EeeCCCCcCcceeeecccceeeeEeeccCC---cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeec
Confidence            355666667788889999988888877653   56677777642       12456677778888854221  2222222


Q ss_pred             C----CccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        147 H----DNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       147 ~----~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |    ....+|.+-..+| +|+.||.+|.||+||
T Consensus       425 kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYd  457 (644)
T KOG2395|consen  425 KQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYD  457 (644)
T ss_pred             cccccccccceeeecCCc-eEEEeecCCcEEeeh
Confidence            3    2235677666654 899999999999996

>KOG3630|consensus

Probab=95.40  E-value=0.27  Score=42.90  Aligned_cols=139  Identities=13%  Similarity=0.086  Sum_probs=81.2

Q ss_pred             CeEEEEEcCCCC--EEEEEeCCCeEEEEEcCCCee-----eeEecCC------CCCeeEEEEccC-CcEEEEeeCCCcEE
Q psy15417         22 DVMSLSLAPDMR--TFVSGACDASAKLWDIRDGSC-----KQTFPGH------ESDINAVTFFPN-GWAFATGSDDATCR   87 (176)
Q Consensus        22 ~V~~~~~~~~~~--~l~s~s~dg~v~~wd~~~~~~-----~~~~~~h------~~~v~~v~~~~~-~~~l~s~s~d~~i~   87 (176)
                      ++..+...+|+.  .++..+.+-.|..||+++-..     ...|.-|      ..-+.++.|.|. .-..+.+..|+.|+
T Consensus       102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~  181 (1405)
T KOG3630|consen  102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR  181 (1405)
T ss_pred             cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence            344444456654  334444444688999875311     1111111      122455677775 33467778888888


Q ss_pred             EeeCCCCCe-eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC----CCccEEEEEEeCCCCE
Q psy15417         88 LFDIRADQE-LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG----HDNRVSCLGVTEDGMA  162 (176)
Q Consensus        88 iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~  162 (176)
                      +..+..... ...+..   ....+++.|+|.|..+++|..+|++.=|-- ..+....+.+    .+..|.++.|.....+
T Consensus       182 V~~~~~~~~~v~s~p~---t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik~~ip~Pp~~e~yrvl~v~Wl~t~ef  257 (1405)
T KOG3630|consen  182 VKSTKQLAQNVTSFPV---TNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIKSEIPEPPVEENYRVLSVTWLSTQEF  257 (1405)
T ss_pred             hhhhhhhhhhhcccCc---ccceeeEEeccccceeeEecCCCeEEEeec-ccceeecccCCCcCCCcceeEEEEecceeE
Confidence            876542211 111121   234678999999999999999999977753 2222222221    2467899999877666


Q ss_pred             EE
Q psy15417        163 VA  164 (176)
Q Consensus       163 l~  164 (176)
                      ++
T Consensus       258 lv  259 (1405)
T KOG3630|consen  258 LV  259 (1405)
T ss_pred             EE
Confidence            54

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.24  E-value=1.4  Score=36.59  Aligned_cols=103  Identities=16%  Similarity=0.265  Sum_probs=64.1

Q ss_pred             cCCCCEEEEEeCCCeEEEEEcCCCeeee--EecCCCCCeeEEEEc--cCCcEEEEeeCCCcEEEeeC-CC-----C---C
Q psy15417         29 APDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFF--PNGWAFATGSDDATCRLFDI-RA-----D---Q   95 (176)
Q Consensus        29 ~~~~~~l~s~s~dg~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~--~~~~~l~s~s~d~~i~iwd~-~~-----~---~   95 (176)
                      +.-++..+.-+....+.|||.+.+....  .| ...+.|.++.|.  |++..+++.|-.+.|.++.- +-     .   .
T Consensus        38 ss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~  116 (631)
T PF12234_consen   38 SSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWA  116 (631)
T ss_pred             cccCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccc
Confidence            3333433333333457899999886433  33 346789999886  68999999999999999853 11     1   1


Q ss_pred             eeeEEeec-ceEeceEEEEECCCCcEEEEEcCCCeEEEEe
Q psy15417         96 ELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWD  134 (176)
Q Consensus        96 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d  134 (176)
                      .+...... ....+|....|.++|..+++.  +..+.|+|
T Consensus       117 ~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~d  154 (631)
T PF12234_consen  117 PIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFD  154 (631)
T ss_pred             eeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEEC
Confidence            12222111 111356778898888766554  34688887

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG1832|consensus

Probab=95.24  E-value=0.024  Score=47.95  Aligned_cols=81  Identities=16%  Similarity=0.222  Sum_probs=59.8

Q ss_pred             eeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC--eEEE
Q psy15417         55 KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF--NCNV  132 (176)
Q Consensus        55 ~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~--~i~v  132 (176)
                      .+.|+.|+...++++|+...++++.|+..|.|++++..+++.....  .++...++-+.=+.+|..+++.+.-.  -..+
T Consensus      1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~--ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESV--NCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred             chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccc--cccccccccccccCCcceeeeeccccCchHHH
Confidence            4577788899999999999999999999999999999887654432  23334566666666787766654333  3568


Q ss_pred             EeCCC
Q psy15417        133 WDSMK  137 (176)
Q Consensus       133 ~d~~~  137 (176)
                      |++..
T Consensus      1172 W~~~s 1176 (1516)
T KOG1832|consen 1172 WDASS 1176 (1516)
T ss_pred             hcccc
Confidence            88543

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=95.24  E-value=0.95  Score=34.24  Aligned_cols=142  Identities=13%  Similarity=0.136  Sum_probs=74.0

Q ss_pred             EcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE---eec
Q psy15417         28 LAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY---SHD  103 (176)
Q Consensus        28 ~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~---~~~  103 (176)
                      |.++.. ++.+--..+.|.-|+..+++ ...+..+ +.+.++.....+..|+++..  .+.+++...+......   ...
T Consensus        32 w~~~~~~L~w~DI~~~~i~r~~~~~g~-~~~~~~p-~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~  107 (307)
T COG3386          32 WDPDRGALLWVDILGGRIHRLDPETGK-KRVFPSP-GGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPEDG  107 (307)
T ss_pred             CcCCCCEEEEEeCCCCeEEEecCCcCc-eEEEECC-CCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccCC
Confidence            556555 44454556778888887664 3334333 23344433333334555543  3445565433331111   111


Q ss_pred             ceEeceEEEEECCCCcEEEEEcC-----------CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc-cCCCc
Q psy15417        104 NIICGITSVAFSRSGRLLLAGYD-----------DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG-SWDSF  171 (176)
Q Consensus       104 ~~~~~v~~~~~~~~~~~l~~g~~-----------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg-~~d~~  171 (176)
                      ......+...+.|+|.+.++...           -|.++.+|. .+........+-..-+.++|+|+++.+... +..+.
T Consensus       108 ~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~  186 (307)
T COG3386         108 LPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANR  186 (307)
T ss_pred             CCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCe
Confidence            22245677888999988776544           123444442 344444444444445779999999665443 33344


Q ss_pred             EEE
Q psy15417        172 LRI  174 (176)
Q Consensus       172 v~v  174 (176)
                      +.-
T Consensus       187 i~r  189 (307)
T COG3386         187 IHR  189 (307)
T ss_pred             EEE
Confidence            443

>PHA03098 kelch-like protein; Provisional

Probab=95.23  E-value=1.2  Score=36.27  Aligned_cols=104  Identities=13%  Similarity=0.212  Sum_probs=49.3

Q ss_pred             CCCEEEEEeCC-----CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC------CcEEEeeCCCCCee
Q psy15417         31 DMRTFVSGACD-----ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD------ATCRLFDIRADQEL   97 (176)
Q Consensus        31 ~~~~l~s~s~d-----g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~~~~~~~   97 (176)
                      ++++++.|+.+     ..+..||..+.+=.  ..++....  ......-+++.++.||.+      ..+..||+.+++ .
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~--~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~-W  418 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRY--NPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNK-W  418 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCc--cceEEEECCEEEEECCcCCCCcccceEEEEeCCCCe-e
Confidence            56677777765     34667887765311  11211111  111122356777777742      346778876532 2


Q ss_pred             eEEee-cceEeceEEEEECCCCcEEEEEcCCC--------eEEEEeCCCce
Q psy15417         98 AMYSH-DNIICGITSVAFSRSGRLLLAGYDDF--------NCNVWDSMKTE  139 (176)
Q Consensus        98 ~~~~~-~~~~~~v~~~~~~~~~~~l~~g~~d~--------~i~v~d~~~~~  139 (176)
                      ..... +........+.  .++.+++.|+.+.        .+.+||..+.+
T Consensus       419 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~  467 (534)
T PHA03098        419 SKGSPLPISHYGGCAIY--HDGKIYVIGGISYIDNIKVYNIVESYNPVTNK  467 (534)
T ss_pred             eecCCCCccccCceEEE--ECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence            11111 11111112222  2566777776432        37788876543

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=95.02  E-value=1.3  Score=34.57  Aligned_cols=151  Identities=15%  Similarity=0.184  Sum_probs=89.2

Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         22 DVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      ....+.+.+++..+.... ....+...+............-...-.++++++.+. .++....+..+.+.|.........
T Consensus        32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~  111 (381)
T COG3391          32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGS  111 (381)
T ss_pred             CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeE
Confidence            334566777775443333 222455555552222221221113345778888877 455555568999999665544333


Q ss_pred             EeecceEeceEEEEECCCCcEEEEEcC---CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc-cCCCcEEEe
Q psy15417        100 YSHDNIICGITSVAFSRSGRLLLAGYD---DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG-SWDSFLRIW  175 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~---d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg-~~d~~v~vw  175 (176)
                      .....   ....++++|++..+.++..   ++++.+.|..+.........-..+ ..+++.|+|+.+... +.++.+.+.
T Consensus       112 ~~vG~---~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi  187 (381)
T COG3391         112 IPVGL---GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVI  187 (381)
T ss_pred             eeecc---CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEE
Confidence            22221   2346889999976655544   688999998777776664433334 678999999865444 467777665


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       188 ~  188 (381)
T COG3391         188 D  188 (381)
T ss_pred             e
Confidence            4

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=95.02  E-value=0.085  Score=44.63  Aligned_cols=69  Identities=14%  Similarity=0.196  Sum_probs=51.3

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      ....|++-+. ..+++.|+.+|.|++||--.-+....|++-..||.+|+.+.||+++++.+. ..+.+.+.
T Consensus       578 ~~Fs~~aTt~-~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  578 NNFSCFATTE-DGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLIDT  646 (794)
T ss_pred             CCceEEEecC-CceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence            3456666544 457899999999999995433456677787899999999999998766644 46666664

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=95.01  E-value=0.47  Score=37.38  Aligned_cols=84  Identities=13%  Similarity=0.200  Sum_probs=56.2

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC-CeeEEEEccCC------------------cEE
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNG------------------WAF   77 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~------------------~~l   77 (176)
                      .-....+.++..+|++++.++...-|.|.++|+.++..++-++|... .+.-+.....+                  -++
T Consensus       304 ~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~Lv  383 (415)
T PF14655_consen  304 PDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLV  383 (415)
T ss_pred             ccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEE
Confidence            33456688899999999999988889999999999988877777532 22222221111                  123


Q ss_pred             EEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         78 ATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        78 ~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      +-+-.-|.+.+|.++.+..+..+
T Consensus       384 IyaprRg~lEvW~~~~g~Rv~a~  406 (415)
T PF14655_consen  384 IYAPRRGILEVWSMRQGPRVAAF  406 (415)
T ss_pred             EEeccCCeEEEEecCCCCEEEEE
Confidence            44455677888888777655443

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=94.96  E-value=1.7  Score=35.64  Aligned_cols=118  Identities=14%  Similarity=0.207  Sum_probs=68.2

Q ss_pred             CCCccCeEEEEEcCC----CCEEEEEeCCCeEEEEEcC-----CCeeee----EecCC-CCCeeEEEEccCCcEEEEeeC
Q psy15417         17 SGHTGDVMSLSLAPD----MRTFVSGACDASAKLWDIR-----DGSCKQ----TFPGH-ESDINAVTFFPNGWAFATGSD   82 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~----~~~l~s~s~dg~v~~wd~~-----~~~~~~----~~~~h-~~~v~~v~~~~~~~~l~s~s~   82 (176)
                      -|+-+.|..+.|.|-    ...|++....+.|-+|.+.     +++...    .+... .---.++.|||....|+.-..
T Consensus        53 iGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~  132 (671)
T PF15390_consen   53 IGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTA  132 (671)
T ss_pred             eeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEec
Confidence            467789999999985    3367777888899999975     122111    12110 111246779998765544433


Q ss_pred             CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcC-CCeEEEEeC
Q psy15417         83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD-DFNCNVWDS  135 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d~~i~v~d~  135 (176)
                      ...--+++++.+....+-... ....|.|..|.+||+.|+.+-. .=..++||-
T Consensus       133 ~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~  185 (671)
T PF15390_consen  133 RDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDS  185 (671)
T ss_pred             CceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence            222233455443332222111 1235788999999987655433 334678984

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.85  E-value=1.2  Score=33.32  Aligned_cols=111  Identities=5%  Similarity=0.087  Sum_probs=66.7

Q ss_pred             EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         57 TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        57 ~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                      .+.+-...|.++.|+|+.+.|++....+..-+|=...++.+...+.... ...-.+.+--++.+.++-=.++++.++.+.
T Consensus        80 pi~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~-~DpE~Ieyig~n~fvi~dER~~~l~~~~vd  158 (316)
T COG3204          80 PILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF-SDPETIEYIGGNQFVIVDERDRALYLFTVD  158 (316)
T ss_pred             ccccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc-CChhHeEEecCCEEEEEehhcceEEEEEEc
Confidence            3455566799999999999999998888877776667777665553321 111134444455555554455666666543


Q ss_pred             Ccee----------eeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417        137 KTER----------AGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus       137 ~~~~----------~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      ....          +......+.....+|+.|....|...-.
T Consensus       159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKE  200 (316)
T COG3204         159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKE  200 (316)
T ss_pred             CCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEc
Confidence            3211          1111122556778888887766655433

>PHA03098 kelch-like protein; Provisional

Probab=94.65  E-value=2  Score=34.98  Aligned_cols=104  Identities=11%  Similarity=0.013  Sum_probs=49.7

Q ss_pred             CCCEEEEEeCCC------eEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeCCC-----cEEEeeCCCCCeee
Q psy15417         31 DMRTFVSGACDA------SAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSDDA-----TCRLFDIRADQELA   98 (176)
Q Consensus        31 ~~~~l~s~s~dg------~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~~~~~   98 (176)
                      ++.+++.|+.++      .+..||..+.+-. .++... .........-+++.++.||.++     .+..||..+.+ ..
T Consensus       294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~  371 (534)
T PHA03098        294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWN-KVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESK-WR  371 (534)
T ss_pred             CCEEEEECCCcCCCCeeccEEEEeCCCCeee-ECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCc-ee
Confidence            455667776543      4667888776532 222111 1111111223577778887653     45667765432 21


Q ss_pred             EEee-cceEeceEEEEECCCCcEEEEEcCC------CeEEEEeCCCc
Q psy15417         99 MYSH-DNIICGITSVAFSRSGRLLLAGYDD------FNCNVWDSMKT  138 (176)
Q Consensus        99 ~~~~-~~~~~~v~~~~~~~~~~~l~~g~~d------~~i~v~d~~~~  138 (176)
                      .... .........+.  -++.+++.|+.+      ..+..||..+.
T Consensus       372 ~~~~lp~~r~~~~~~~--~~~~iYv~GG~~~~~~~~~~v~~yd~~t~  416 (534)
T PHA03098        372 EEPPLIFPRYNPCVVN--VNNLIYVIGGISKNDELLKTVECFSLNTN  416 (534)
T ss_pred             eCCCcCcCCccceEEE--ECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence            1111 11111111122  256777777632      35778886654

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=94.63  E-value=0.59  Score=38.17  Aligned_cols=70  Identities=20%  Similarity=0.177  Sum_probs=43.3

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCC----Ce-eeeE----------ecC-----------CCCCeeEEEEcc----CCcEEEE
Q psy15417         30 PDMRTFVSGACDASAKLWDIRD----GS-CKQT----------FPG-----------HESDINAVTFFP----NGWAFAT   79 (176)
Q Consensus        30 ~~~~~l~s~s~dg~v~~wd~~~----~~-~~~~----------~~~-----------h~~~v~~v~~~~----~~~~l~s   79 (176)
                      ++...++.+..||.+...+...    +. ....          +.+           ....+..+++++    +..++++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4667788888999988777654    11 1111          110           123455666666    6789999


Q ss_pred             eeCCCcEEEeeCCCCCeeeE
Q psy15417         80 GSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~   99 (176)
                      .+.|+++|+||+.+.+.+..
T Consensus       236 l~~D~~LRiW~l~t~~~~~~  255 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCLAT  255 (547)
T ss_dssp             EETTSEEEEEETTTTCEEEE
T ss_pred             EeCCCeEEEEECCCCeEEEE
Confidence            99999999999998877443

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>KOG4441|consensus

Probab=94.61  E-value=1.8  Score=35.80  Aligned_cols=134  Identities=16%  Similarity=0.231  Sum_probs=66.6

Q ss_pred             CCCEEEEEeCC------CeEEEEEcCCCeeeeEecCCCCCeeEEEE-ccCCcEEEEeeCCCc-----EEEeeCCCCCeee
Q psy15417         31 DMRTFVSGACD------ASAKLWDIRDGSCKQTFPGHESDINAVTF-FPNGWAFATGSDDAT-----CRLFDIRADQELA   98 (176)
Q Consensus        31 ~~~~l~s~s~d------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~-~~~~~~l~s~s~d~~-----i~iwd~~~~~~~~   98 (176)
                      ++.+.++|+.|      .++..||.++++=.. +.....+=..... .-+|..++.||.||.     +..||.++++ ..
T Consensus       332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~-W~  409 (571)
T KOG4441|consen  332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNK-WT  409 (571)
T ss_pred             CCEEEEEccccCCCcccceEEEecCCCCceec-cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCc-cc
Confidence            45788899988      345678877664111 1111111111111 126888999999874     5667765432 11


Q ss_pred             EEe-ecceEeceEEEEECCCCcEEEEEcCCCe------EEEEeCCCce--eeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         99 MYS-HDNIICGITSVAFSRSGRLLLAGYDDFN------CNVWDSMKTE--RAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        99 ~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~~------i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      ... ..........+.+  ++.++++|+.++.      +..||..+.+  .+..+...... ..++.. ++...+.||.|
T Consensus       410 ~va~m~~~r~~~gv~~~--~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~-~g~a~~-~~~iYvvGG~~  485 (571)
T KOG4441|consen  410 PVAPMLTRRSGHGVAVL--GGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSG-FGVAVL-NGKIYVVGGFD  485 (571)
T ss_pred             ccCCCCcceeeeEEEEE--CCEEEEEcCcCCCccccceEEEEcCCCCceeecCCccccccc-ceEEEE-CCEEEEECCcc
Confidence            111 1111112222222  6788888886553      4567754432  22222211111 223333 45677788877


Q ss_pred             C
Q psy15417        170 S  170 (176)
Q Consensus       170 ~  170 (176)
                      +
T Consensus       486 ~  486 (571)
T KOG4441|consen  486 G  486 (571)
T ss_pred             C
Confidence            6

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.57  E-value=0.18  Score=26.09  Aligned_cols=31  Identities=16%  Similarity=0.288  Sum_probs=24.5

Q ss_pred             CCeeEEEEccCCc---EEEEeeCCCcEEEeeCCC
Q psy15417         63 SDINAVTFFPNGW---AFATGSDDATCRLFDIRA   93 (176)
Q Consensus        63 ~~v~~v~~~~~~~---~l~s~s~d~~i~iwd~~~   93 (176)
                      +.|+++.|+|+..   +|+-+-..+.+.++|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            4689999998644   666666678999999985

It contains a characteristic DLL sequence motif.

>PHA02790 Kelch-like protein; Provisional

Probab=94.54  E-value=2  Score=34.58  Aligned_cols=129  Identities=14%  Similarity=0.119  Sum_probs=61.9

Q ss_pred             CCCEEEEEeCC--CeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEeeCCC---cEEEeeCCCCCeeeEEeec
Q psy15417         31 DMRTFVSGACD--ASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDDA---TCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        31 ~~~~l~s~s~d--g~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~~  103 (176)
                      ++.+.+.|+.+  .++..||..+++  ....++....  ......-+++.++.||.++   .+..||.+++ ........
T Consensus       318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~--~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~-~W~~~~~m  394 (480)
T PHA02790        318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRC--NPAVASINNVIYVIGGHSETDTTTEYLLPNHD-QWQFGPST  394 (480)
T ss_pred             CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCc--ccEEEEECCEEEEecCcCCCCccEEEEeCCCC-EEEeCCCC
Confidence            56667777754  347788876553  1222221111  1122223677888887654   4667887543 22221111


Q ss_pred             c-eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417        104 N-IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus       104 ~-~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      . .......+.  -++.+++.|+   ...+||.++.+-  +..+....... .++.. ++...+.||.+
T Consensus       395 ~~~r~~~~~~~--~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~~~-~~~v~-~~~IYviGG~~  456 (480)
T PHA02790        395 YYPHYKSCALV--FGRRLFLVGR---NAEFYCESSNTWTLIDDPIYPRDNP-ELIIV-DNKLLLIGGFY  456 (480)
T ss_pred             CCccccceEEE--ECCEEEEECC---ceEEecCCCCcEeEcCCCCCCcccc-EEEEE-CCEEEEECCcC
Confidence            1 111112222  2667777774   466788655432  22222111122 23333 56677788764

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.54  E-value=0.16  Score=39.04  Aligned_cols=65  Identities=20%  Similarity=0.293  Sum_probs=44.1

Q ss_pred             cCCCCEEEEEe---------CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         29 APDMRTFVSGA---------CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        29 ~~~~~~l~s~s---------~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      |||+++++...         ..+...++|+++++....... ...+....|+|+|+.++-.. ++.|.++++.+++
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~   74 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQ   74 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCC
Confidence            46666665532         246678999999865443332 56788999999999887775 5788888876553

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=94.43  E-value=0.57  Score=33.57  Aligned_cols=63  Identities=13%  Similarity=0.241  Sum_probs=45.7

Q ss_pred             EcCCCCEEEEEeCCCeEEEEEcCCCeeeeE-------ec-------CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         28 LAPDMRTFVSGACDASAKLWDIRDGSCKQT-------FP-------GHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        28 ~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~-------~~-------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      +..++.+|++-+.+|.+.+||+.+.++...       +.       .....|..+.+..+|.-+++-+. |....|+.
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsn-g~~y~y~~   94 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSN-GDSYSYSP   94 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeC-CCEEEecc
Confidence            345678899999999999999998865331       11       24456788888888887777654 56777764

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=94.07  E-value=0.68  Score=33.21  Aligned_cols=62  Identities=18%  Similarity=0.161  Sum_probs=44.6

Q ss_pred             ECCCCcEEEEEcCCCeEEEEeCCCceeeeee------c--------CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        114 FSRSGRLLLAGYDDFNCNVWDSMKTERAGIL------A--------GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       114 ~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~------~--------~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +..++.++++-+.+|.+++||+.+.+.....      .        .....|..+.++.+|.-|++-+ +|..+.|+
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~   93 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYS   93 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEec
Confidence            4457788999999999999998877643322      1        2345678888888887776664 46777775

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.97  E-value=2  Score=32.21  Aligned_cols=121  Identities=19%  Similarity=0.264  Sum_probs=81.0

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ..|-...|.++.|+|+.+.|++....+.-.++=-.+|+.+++++-.. .....+.+..++...++--+++++.++.+..+
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~  160 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD  160 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence            34555669999999999999888888777777666788888776421 33456777777777777777777777765443


Q ss_pred             Ceee-----EEe---ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         95 QELA-----MYS---HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        95 ~~~~-----~~~---~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                      ..+.     .++   ..+..++.--++|.|....|...-+-.-+.||...
T Consensus       161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~  210 (316)
T COG3204         161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT  210 (316)
T ss_pred             ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence            2111     111   11112345568999988888887777777777643

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=93.91  E-value=2.2  Score=32.65  Aligned_cols=102  Identities=13%  Similarity=0.109  Sum_probs=63.7

Q ss_pred             CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeCCCCCeeeEEeecce--E---
Q psy15417         42 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDIRADQELAMYSHDNI--I---  106 (176)
Q Consensus        42 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~~~~--~---  106 (176)
                      +.+.++|.++++.+-.+..  +-.-.+..+|+++.+++++          +.-.|.+||..+-+.......+..  .   
T Consensus        17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~   94 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV   94 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred             ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence            4799999999987766653  2234467889998877653          233588999988766554443321  1   


Q ss_pred             eceEEEEECCCCcEEEEEc--CCCeEEEEeCCCceeeeeec
Q psy15417        107 CGITSVAFSRSGRLLLAGY--DDFNCNVWDSMKTERAGILA  145 (176)
Q Consensus       107 ~~v~~~~~~~~~~~l~~g~--~d~~i~v~d~~~~~~~~~~~  145 (176)
                      .......++.++++++...  --..+.|-|+..++.+.++.
T Consensus        95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~  135 (342)
T PF06433_consen   95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEID  135 (342)
T ss_dssp             --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEE
T ss_pred             ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeec
Confidence            1123456778888776643  23357888888887776654

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG1916|consensus

Probab=93.88  E-value=0.046  Score=46.31  Aligned_cols=68  Identities=19%  Similarity=0.320  Sum_probs=45.6

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEE-----------EccCCcEEEEeeCCCcEEEeeC
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT-----------FFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~-----------~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      |.-+-|-++.-++..+-.++++++.++++.. ..-+++|...+..++           ++|||+.|+.+..||.++.|.+
T Consensus       186 V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~-~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi  264 (1283)
T KOG1916|consen  186 VSWCPIAVNKVYICYGLKGGEIRLLNINRAL-RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI  264 (1283)
T ss_pred             eeecccccccceeeeccCCCceeEeeechHH-HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence            3334444566677777778899888776543 244566776665533           4677888888888888887765

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.88  E-value=1.6  Score=32.65  Aligned_cols=55  Identities=22%  Similarity=0.390  Sum_probs=41.5

Q ss_pred             EEcCCCCEEEEEeCC-----CeEEEEEcCCC-eeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417         27 SLAPDMRTFVSGACD-----ASAKLWDIRDG-SCKQTFPGHESDINAVTFFPNGWAFATGS   81 (176)
Q Consensus        27 ~~~~~~~~l~s~s~d-----g~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~~~~~~l~s~s   81 (176)
                      .|||||.+|+..-.|     |.|-+||.+.+ ..+-++..|.-..-.+.+.+||..++.+.
T Consensus       120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan  180 (366)
T COG3490         120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN  180 (366)
T ss_pred             ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence            389999999887665     56779999754 34557777766666788999999887764

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=93.81  E-value=1.4  Score=36.01  Aligned_cols=61  Identities=18%  Similarity=0.179  Sum_probs=42.6

Q ss_pred             CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417         42 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        42 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~  103 (176)
                      |.+.-+|+.+++.....+.......+. +.-.+..++.+..+|.++.+|.++++.+..+...
T Consensus       441 g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       441 GSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             eeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence            567889999998888776432212222 2224557788888999999999999988665543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=93.79  E-value=1.9  Score=31.54  Aligned_cols=145  Identities=15%  Similarity=0.183  Sum_probs=80.2

Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCeeeeEe-cCCCCCeeEEEEccCCcEEEEeeCCCcEEEee-CCCCCee-
Q psy15417         22 DVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQTF-PGHESDINAVTFFPNGWAFATGSDDATCRLFD-IRADQEL-   97 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd-~~~~~~~-   97 (176)
                      .+...++++++..++... .++.-.+|-...+.....+ .+  ..+..-.|.+++...+....+...+++. ..++... 
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~  102 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTG--GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP  102 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccC--CccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence            677899999998766555 2333333333333222222 32  2577788999987666666566666663 2222221 


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEc---CCCeEEEEeCCC---c------eeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDSMK---T------ERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~---~------~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      ...........|..+.++|||..++.-.   .++.+.+=-+.+   +      ............+..++|.+++.+++.
T Consensus       103 ~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~  182 (253)
T PF10647_consen  103 VEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVL  182 (253)
T ss_pred             EEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEE
Confidence            1111111111688999999998665433   345666554322   2      111112223456788999998877655


Q ss_pred             ccC
Q psy15417        166 GSW  168 (176)
Q Consensus       166 g~~  168 (176)
                      +..
T Consensus       183 ~~~  185 (253)
T PF10647_consen  183 GRS  185 (253)
T ss_pred             eCC
Confidence            543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=93.76  E-value=0.94  Score=35.73  Aligned_cols=90  Identities=12%  Similarity=0.108  Sum_probs=54.9

Q ss_pred             EEEEccCCcEEEEeeCCCcEEE---eeCC-CC--Ceee--EE--eec----ceEeceEEEEE--------CCCCcEEEEE
Q psy15417         67 AVTFFPNGWAFATGSDDATCRL---FDIR-AD--QELA--MY--SHD----NIICGITSVAF--------SRSGRLLLAG  124 (176)
Q Consensus        67 ~v~~~~~~~~l~s~s~d~~i~i---wd~~-~~--~~~~--~~--~~~----~~~~~v~~~~~--------~~~~~~l~~g  124 (176)
                      .++.+|++..++-+..++.+.+   |+.. .+  ....  .+  ..+    ..+..+.++-+        .+|...+++|
T Consensus         6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG   85 (415)
T PF14655_consen    6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG   85 (415)
T ss_pred             eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence            3566788888877777666544   5431 11  1111  11  111    12334444544        2556889999


Q ss_pred             cCCCeEEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417        125 YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT  157 (176)
Q Consensus       125 ~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~  157 (176)
                      ..+|.+++|. +++..+....-|..+|..+.+.
T Consensus        86 ~ssG~vrfyt-e~G~LL~~Q~~h~~pV~~ik~~  117 (415)
T PF14655_consen   86 TSSGYVRFYT-ENGVLLLSQLLHEEPVLKIKCR  117 (415)
T ss_pred             ecccEEEEEe-ccchHHHHHhcCccceEEEEec
Confidence            9999999998 5777666666677777776653

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=93.71  E-value=4.1  Score=34.98  Aligned_cols=113  Identities=12%  Similarity=0.056  Sum_probs=69.7

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC--------CeeEEEEcc----------------CCcEEEEeeCCCcEE
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHES--------DINAVTFFP----------------NGWAFATGSDDATCR   87 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~--------~v~~v~~~~----------------~~~~l~s~s~d~~i~   87 (176)
                      +..++.++.++.|.-.|.++|+.+..+.-...        ..+.+.+..                .+..++.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            45677888899999999999998888754221        123344432                234677888899988


Q ss_pred             EeeCCCCCeeeEEeecceEe----------ceEEEEECC--CCcEEEEEcC----------CCeEEEEeCCCceeeeee
Q psy15417         88 LFDIRADQELAMYSHDNIIC----------GITSVAFSR--SGRLLLAGYD----------DFNCNVWDSMKTERAGIL  144 (176)
Q Consensus        88 iwd~~~~~~~~~~~~~~~~~----------~v~~~~~~~--~~~~l~~g~~----------d~~i~v~d~~~~~~~~~~  144 (176)
                      -.|.++++....+.......          .-....-.|  .+..+++|+.          +|.|+-+|.++++.....
T Consensus       274 ALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~  352 (764)
T TIGR03074       274 ALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW  352 (764)
T ss_pred             EEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence            88988888765543221100          000011111  1234445532          688999999999877654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=93.59  E-value=2.8  Score=32.72  Aligned_cols=140  Identities=14%  Similarity=0.102  Sum_probs=64.4

Q ss_pred             EEEEcCCCC-EEEEEeCCCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417         25 SLSLAPDMR-TFVSGACDAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        25 ~~~~~~~~~-~l~s~s~dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~  101 (176)
                      .=+|.+||+ +|+.+..||.  +.+.|+.+++..+...+......+..++|+.+.++-......++--|+.+.+....+.
T Consensus        40 ~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~  119 (386)
T PF14583_consen   40 QNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYE  119 (386)
T ss_dssp             S--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE
T ss_pred             CCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEE
Confidence            345677886 4455555655  5567888887554333322333356677887776656556678888998877655555


Q ss_pred             ecceEeceEEEEECCCCcEEEEEc----------------------CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC
Q psy15417        102 HDNIICGITSVAFSRSGRLLLAGY----------------------DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED  159 (176)
Q Consensus       102 ~~~~~~~v~~~~~~~~~~~l~~g~----------------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~  159 (176)
                      .+..-.+.-....+.++..++..-                      -.+.|..-|+.+++....+. -..++..+-|+|.
T Consensus       120 ~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~  198 (386)
T PF14583_consen  120 VPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPT  198 (386)
T ss_dssp             --TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-EEEEEEETT
T ss_pred             CCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCccccCcccCCC
Confidence            443221111122344555543321                      11233344555555433332 3456677778886


Q ss_pred             CCEEEE
Q psy15417        160 GMAVAT  165 (176)
Q Consensus       160 ~~~l~t  165 (176)
                      ...+++
T Consensus       199 dp~li~  204 (386)
T PF14583_consen  199 DPTLIM  204 (386)
T ss_dssp             EEEEEE
T ss_pred             CCCEEE
Confidence            544443

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=93.59  E-value=2.5  Score=32.26  Aligned_cols=103  Identities=19%  Similarity=0.287  Sum_probs=54.4

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee---eeEe----cCCCCCeeEEEEccC----CcEEEEeeCC--------
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSC---KQTF----PGHESDINAVTFFPN----GWAFATGSDD--------   83 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~---~~~~----~~h~~~v~~v~~~~~----~~~l~s~s~d--------   83 (176)
                      -+.|+|.||+++|++ ...|.|++++ ..+..   +..+    .........++++|+    +..++..+..        
T Consensus         4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            468999999887765 5599999999 44443   2222    123456889999994    5544444422        


Q ss_pred             CcEEEeeCCCC-------CeeeEE-ee-cceEeceEEEEECCCCcEEEEEcCC
Q psy15417         84 ATCRLFDIRAD-------QELAMY-SH-DNIICGITSVAFSRSGRLLLAGYDD  127 (176)
Q Consensus        84 ~~i~iwd~~~~-------~~~~~~-~~-~~~~~~v~~~~~~~~~~~l~~g~~d  127 (176)
                      ..|.-|.....       +.+... +. ......-..+.|.||+.++++.+..
T Consensus        82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~  134 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDG  134 (331)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-T
T ss_pred             eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCC
Confidence            12333333222       111111 11 0011123568999999877665433

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=93.37  E-value=3.6  Score=33.39  Aligned_cols=132  Identities=14%  Similarity=0.162  Sum_probs=76.9

Q ss_pred             EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-------cEEEEeeCCCcEEEeeCCCCC-eeeEEeecce
Q psy15417         34 TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-------WAFATGSDDATCRLFDIRADQ-ELAMYSHDNI  105 (176)
Q Consensus        34 ~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-------~~l~s~s~d~~i~iwd~~~~~-~~~~~~~~~~  105 (176)
                      ++..|.....+.--|+..|+.+.++..|...  -++|.|..       ..-+.|-.+..|.--|.|-.. .+...+....
T Consensus       482 i~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY  559 (776)
T COG5167         482 IYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDY  559 (776)
T ss_pred             EEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhc
Confidence            3344555555667788889999888888765  37777753       223344444444444654322 2222222211


Q ss_pred             E--eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417        106 I--CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus       106 ~--~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      .  ...++..- ...-++++++..|-|++||-.....-..+++....|..+..+.+|+.+.+.+.
T Consensus       560 ~tKn~Fss~~t-TesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk  623 (776)
T COG5167         560 KTKNKFSSGMT-TESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK  623 (776)
T ss_pred             ccccccccccc-ccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec
Confidence            1  11222222 23457889999999999994433334456666777888888888887654433

>KOG4499|consensus

Probab=93.30  E-value=0.87  Score=33.05  Aligned_cols=57  Identities=11%  Similarity=0.113  Sum_probs=45.2

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC--CcEEEEeeC
Q psy15417         26 LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWAFATGSD   82 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~   82 (176)
                      +++..+|.+.+++-.-++|.-.|..+|+.+.+++-.+..++++||--.  ...++++..
T Consensus       217 m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGkn~d~~yvT~aa  275 (310)
T KOG4499|consen  217 MTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGKNLDILYVTTAA  275 (310)
T ss_pred             ceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCCCccEEEEEehh
Confidence            444567888888888999999999999999999988999999999644  334455543

>PHA02790 Kelch-like protein; Provisional

Probab=93.19  E-value=3.8  Score=33.06  Aligned_cols=103  Identities=7%  Similarity=-0.031  Sum_probs=52.0

Q ss_pred             CCCEEEEEeCCC-----eEEEEEcCCCeeee--EecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCeeeEEe
Q psy15417         31 DMRTFVSGACDA-----SAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQELAMYS  101 (176)
Q Consensus        31 ~~~~l~s~s~dg-----~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~  101 (176)
                      ++.+++.|+.++     ++..||..+++-..  .++........+  .-++..++.||.++  ++..||..+++ ....+
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v--~~~~~iYviGG~~~~~sve~ydp~~n~-W~~~~  347 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV--PANNKLYVVGGLPNPTSVERWFHGDAA-WVNMP  347 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE--EECCEEEEECCcCCCCceEEEECCCCe-EEECC
Confidence            455667777543     46678887764221  222111111122  23677788888643  57778865432 22211


Q ss_pred             ecc-eEeceEEEEECCCCcEEEEEcCCC---eEEEEeCCCc
Q psy15417        102 HDN-IICGITSVAFSRSGRLLLAGYDDF---NCNVWDSMKT  138 (176)
Q Consensus       102 ~~~-~~~~v~~~~~~~~~~~l~~g~~d~---~i~v~d~~~~  138 (176)
                      ... .......+.+  ++.+++.|+.++   .+..||..+.
T Consensus       348 ~l~~~r~~~~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~  386 (480)
T PHA02790        348 SLLKPRCNPAVASI--NNVIYVIGGHSETDTTTEYLLPNHD  386 (480)
T ss_pred             CCCCCCcccEEEEE--CCEEEEecCcCCCCccEEEEeCCCC
Confidence            111 1111122222  678888877554   3557775543

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=93.06  E-value=2.7  Score=31.03  Aligned_cols=113  Identities=15%  Similarity=0.117  Sum_probs=68.8

Q ss_pred             EEEEcCCCCEEEEEeCCC--eEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417         25 SLSLAPDMRTFVSGACDA--SAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg--~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~  101 (176)
                      .+.|..++.++-+.+.-|  .++.+|+.+++.....+-.. .-=.+++...+.-+.+|- ..+...+||..+-+.+..+.
T Consensus        49 GL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTW-k~~~~f~yd~~tl~~~~~~~  127 (264)
T PF05096_consen   49 GLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTW-KEGTGFVYDPNTLKKIGTFP  127 (264)
T ss_dssp             EEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEES-SSSEEEEEETTTTEEEEEEE
T ss_pred             cEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEe-cCCeEEEEccccceEEEEEe
Confidence            566766777777777777  47899999998665444322 112345555333223333 56788999998877777777


Q ss_pred             ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee
Q psy15417        102 HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI  143 (176)
Q Consensus       102 ~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~  143 (176)
                      ++..--+++     .++..|+....+..++++|..+.+....
T Consensus       128 y~~EGWGLt-----~dg~~Li~SDGS~~L~~~dP~~f~~~~~  164 (264)
T PF05096_consen  128 YPGEGWGLT-----SDGKRLIMSDGSSRLYFLDPETFKEVRT  164 (264)
T ss_dssp             -SSS--EEE-----ECSSCEEEE-SSSEEEEE-TTT-SEEEE
T ss_pred             cCCcceEEE-----cCCCEEEEECCccceEEECCcccceEEE
Confidence            665434444     3677777777778899999766554443

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=92.91  E-value=3.7  Score=32.18  Aligned_cols=99  Identities=18%  Similarity=0.214  Sum_probs=57.2

Q ss_pred             eeEEEEccCCcEEEEe-eCCC----cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcC-----------CC
Q psy15417         65 INAVTFFPNGWAFATG-SDDA----TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD-----------DF  128 (176)
Q Consensus        65 v~~v~~~~~~~~l~s~-s~d~----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-----------d~  128 (176)
                      +....++|++++++-+ +..|    .++++|+.+++.+.. ....  ..-..+.|.++++.|+....           ..
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d-~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~  202 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPD-GIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR  202 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEE-EEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCC-cccc--cccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence            3467889999876544 4444    499999998865432 1111  11223899999876655432           22


Q ss_pred             eEEEEeCCCceee--eeecCCCc--cEEEEEEeCCCCEEEEc
Q psy15417        129 NCNVWDSMKTERA--GILAGHDN--RVSCLGVTEDGMAVATG  166 (176)
Q Consensus       129 ~i~v~d~~~~~~~--~~~~~~~~--~i~~~~~~~~~~~l~tg  166 (176)
                      .++.|.+.+....  ..+.....  ....+..++++.+|+..
T Consensus       203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~  244 (414)
T PF02897_consen  203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFIS  244 (414)
T ss_dssp             EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEE
T ss_pred             EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEE
Confidence            3677776554222  23322222  25567889999987643

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=92.21  E-value=2.7  Score=28.87  Aligned_cols=29  Identities=24%  Similarity=0.233  Sum_probs=23.3

Q ss_pred             ceEEEEECCCC------cEEEEEcCCCeEEEEeCC
Q psy15417        108 GITSVAFSRSG------RLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus       108 ~v~~~~~~~~~------~~l~~g~~d~~i~v~d~~  136 (176)
                      .+-.++|+|.|      .+|++-+.++.+.+|...
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~  121 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP  121 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence            46678999954      578889999999999744

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=91.98  E-value=6  Score=32.42  Aligned_cols=60  Identities=15%  Similarity=0.089  Sum_probs=35.9

Q ss_pred             cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC
Q psy15417         85 TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH  147 (176)
Q Consensus        85 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~  147 (176)
                      .+.-+|+.+++.....+......+ ..+.  ..+.+++.+..+|.++.+|.++++.+....-.
T Consensus       442 ~l~AiD~~tGk~~W~~~~~~p~~~-~~l~--t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       442 SLIAWDPITGKIVWEHKEDFPLWG-GVLA--TAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             eEEEEeCCCCceeeEecCCCCCCC-cceE--ECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence            456667766655443332211000 0111  13456777888999999999999988876543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG1897|consensus

Probab=91.94  E-value=8.1  Score=33.82  Aligned_cols=145  Identities=14%  Similarity=0.174  Sum_probs=81.7

Q ss_pred             eEEEEEcCC-CCEEEEEeC----------CCeEEEEEcCCCeeeeEecCC--CCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         23 VMSLSLAPD-MRTFVSGAC----------DASAKLWDIRDGSCKQTFPGH--ESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        23 V~~~~~~~~-~~~l~s~s~----------dg~v~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      |.++.|..| +.+++.|..          .|.+.++.+.....++....+  .+.|.++... +|++++.-+  ..++++
T Consensus       777 i~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~In--~~vrLy  853 (1096)
T KOG1897|consen  777 IISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAGIN--QSVRLY  853 (1096)
T ss_pred             eeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEecC--cEEEEE
Confidence            444558776 667777754          366677777663334444333  3556555443 466666554  579999


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeC--CCceeee-eecCCCccEEEEEEeCCCCEEEEc
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS--MKTERAG-ILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~--~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      +...+..+..-..  ...++..+...-.+..+++|..-+.+.+...  ..+...- .-..+..+..++.+..+..++. +
T Consensus       854 e~t~~~eLr~e~~--~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmtaveil~~d~ylg-a  930 (1096)
T KOG1897|consen  854 EWTTERELRIECN--ISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMTAVEILDDDTYLG-A  930 (1096)
T ss_pred             Eccccceehhhhc--ccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccceeeEEEecCceEEe-e
Confidence            9876644433211  1123445555567888888887777766442  2221222 1223566788888876666653 3


Q ss_pred             cCCCcEE
Q psy15417        167 SWDSFLR  173 (176)
Q Consensus       167 ~~d~~v~  173 (176)
                      -.++.+.
T Consensus       931 e~~gNlf  937 (1096)
T KOG1897|consen  931 ENSGNLF  937 (1096)
T ss_pred             cccccEE
Confidence            3444443

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=91.88  E-value=5.2  Score=31.52  Aligned_cols=146  Identities=10%  Similarity=0.018  Sum_probs=76.7

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeE-EEEEcCCCe-eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe----
Q psy15417         23 VMSLSLAPDMRTFVSGACDASA-KLWDIRDGS-CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE----   96 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v-~~wd~~~~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~----   96 (176)
                      ...+..++++.+++.+. .|.+ +-||-.... ..... .....++++.+.+++..++.+ .+|.+.. ....++.    
T Consensus       241 f~~v~~~~dG~~~~vg~-~G~~~~s~d~G~~~W~~~~~-~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~  316 (398)
T PLN00033        241 FSTVNRSPDGDYVAVSS-RGNFYLTWEPGQPYWQPHNR-ASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDF  316 (398)
T ss_pred             eeeEEEcCCCCEEEEEC-CccEEEecCCCCcceEEecC-CCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCccccc
Confidence            34455667777766665 4433 334432110 01111 124568899999988877666 5555432 2223321    


Q ss_pred             -eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec---CCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         97 -LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA---GHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        97 -~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                       ............+..+.+.+++..+++| ..|.+..-. ..++.-....   .-...++.+.|.++++.+++| .+|.|
T Consensus       317 ~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~i  393 (398)
T PLN00033        317 DFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVL  393 (398)
T ss_pred             ceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEE
Confidence             1111111111246778888887777666 556554443 3333322222   113456788888777776665 66766


Q ss_pred             EEe
Q psy15417        173 RIW  175 (176)
Q Consensus       173 ~vw  175 (176)
                      .-|
T Consensus       394 l~~  396 (398)
T PLN00033        394 LRY  396 (398)
T ss_pred             EEe
Confidence            544

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=91.82  E-value=2.3  Score=33.99  Aligned_cols=152  Identities=11%  Similarity=0.126  Sum_probs=86.0

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee-eEecCC-CC----Cee-EEEEccCCcEEEEeeCCCcEEEe-e
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK-QTFPGH-ES----DIN-AVTFFPNGWAFATGSDDATCRLF-D   90 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~-~~~~~h-~~----~v~-~v~~~~~~~~l~s~s~d~~i~iw-d   90 (176)
                      --+.|..+-..||++.|..-+. .++.++++.+.... +.+... .+    .|+ .+.....|..+..++.||-+..| |
T Consensus       219 ~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFd  297 (733)
T COG4590         219 PFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFD  297 (733)
T ss_pred             CccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeee
Confidence            3456677788999997776665 46777777654211 111111 11    122 22334457788999999999888 4


Q ss_pred             CCCCCee-----eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         91 IRADQEL-----AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        91 ~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      .+.+...     +.+....  .++..+.-..+.+-+++-..+|++.++.....+. ..+..-.+....++++|++.++++
T Consensus       298 vr~~~~p~l~h~R~f~l~p--a~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~-lL~~~~~~~~~~~~~Sp~~~~Ll~  374 (733)
T COG4590         298 VRRDGQPHLNHIRNFKLAP--AEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKL-LLFERAYQAPQLVAMSPNQAYLLS  374 (733)
T ss_pred             eecCCCCcceeeeccccCc--ccceeeccccccceEEEEcCCCceeeeecccCcc-eehhhhhcCcceeeeCcccchhee
Confidence            4433221     1111111  2233333222345677778888888887433333 323323345667889999999866


Q ss_pred             ccCCCcEEEe
Q psy15417        166 GSWDSFLRIW  175 (176)
Q Consensus       166 g~~d~~v~vw  175 (176)
                      - +.|.++++
T Consensus       375 e-~~gki~~~  383 (733)
T COG4590         375 E-DQGKIRLA  383 (733)
T ss_pred             e-cCCceEEE
Confidence            5 44566654

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=91.59  E-value=4.2  Score=29.82  Aligned_cols=99  Identities=18%  Similarity=0.179  Sum_probs=57.8

Q ss_pred             CeeEEEEccCCcEEEEee--CC-CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEe-CCCce
Q psy15417         64 DINAVTFFPNGWAFATGS--DD-ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD-SMKTE  139 (176)
Q Consensus        64 ~v~~v~~~~~~~~l~s~s--~d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d-~~~~~  139 (176)
                      .+.+.++++++..++...  .+ ..+.++....  ....... .  ..+..-.|++++...+....+...+++. ...++
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~--~~~~~~~-g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~   99 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGG--PVRPVLT-G--GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGT   99 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCC--cceeecc-C--CccccccccCCCCEEEEEcCCCceEEEEecCCCc
Confidence            688899999998777666  32 3355554332  2222111 1  1344567889988777766666666663 22222


Q ss_pred             --eeee-ecCCCccEEEEEEeCCCCEEEEcc
Q psy15417        140 --RAGI-LAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus       140 --~~~~-~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                        .... ...-...|..+.++|||..+|.-.
T Consensus       100 ~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~  130 (253)
T PF10647_consen  100 GEPVEVDWPGLRGRITALRVSPDGTRVAVVV  130 (253)
T ss_pred             ceeEEecccccCCceEEEEECCCCcEEEEEE
Confidence              1111 111112899999999998876544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=91.36  E-value=2.9  Score=27.53  Aligned_cols=88  Identities=10%  Similarity=0.088  Sum_probs=51.4

Q ss_pred             EEEEccCCcEEEEeeCCCcEEEeeCCC--------CCeeeEEeecceEeceEEEEECC--CCcEEEEEcCCCeEEEEeCC
Q psy15417         67 AVTFFPNGWAFATGSDDATCRLFDIRA--------DQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        67 ~v~~~~~~~~l~s~s~d~~i~iwd~~~--------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~d~~i~v~d~~  136 (176)
                      ...|......|+.+...++|.+++...        ...+........+..+.+-.+.|  +...|+.|+.. .+..||++
T Consensus         3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t-~llaYDV~   81 (136)
T PF14781_consen    3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQT-SLLAYDVE   81 (136)
T ss_pred             EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccc-eEEEEEcc
Confidence            345655566788888888999988642        22344445444444444444543  34678888665 57799987


Q ss_pred             CceeeeeecCCCccEEEEEE
Q psy15417        137 KTERAGILAGHDNRVSCLGV  156 (176)
Q Consensus       137 ~~~~~~~~~~~~~~i~~~~~  156 (176)
                      ...-+... .-.+.+.++.+
T Consensus        82 ~N~d~Fyk-e~~DGvn~i~~  100 (136)
T PF14781_consen   82 NNSDLFYK-EVPDGVNAIVI  100 (136)
T ss_pred             cCchhhhh-hCccceeEEEE
Confidence            65332211 12355666655

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=91.20  E-value=6.4  Score=31.24  Aligned_cols=143  Identities=9%  Similarity=0.012  Sum_probs=80.0

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCee-----eeEecCCCCCeeEEEEc---cC-CcEEEEeeCCCcEEEeeCCCC--C----
Q psy15417         31 DMRTFVSGACDASAKLWDIRDGSC-----KQTFPGHESDINAVTFF---PN-GWAFATGSDDATCRLFDIRAD--Q----   95 (176)
Q Consensus        31 ~~~~l~s~s~dg~v~~wd~~~~~~-----~~~~~~h~~~v~~v~~~---~~-~~~l~s~s~d~~i~iwd~~~~--~----   95 (176)
                      +...++.||..|.+++|+...++.     +-+.+ -..||..+..-   +. ....++.-.-+.+.+|.+...  .    
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~-l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g  114 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQ-LKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHG  114 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCccEEEEEe-cCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccC
Confidence            346899999999999999865431     11111 23566655443   22 333455566778888876321  1    


Q ss_pred             -ee---eEEeecceEe--ceEEEEECC-C-CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417         96 -EL---AMYSHDNIIC--GITSVAFSR-S-GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        96 -~~---~~~~~~~~~~--~v~~~~~~~-~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                       ..   ..+++.-...  ....-.|.- . ...+.+-+-||.+.+|+-+.......++...- --.++|.+.-..+++++
T Consensus       115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~ll-PgPl~Y~~~tDsfvt~s  193 (418)
T PF14727_consen  115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLL-PGPLCYCPRTDSFVTAS  193 (418)
T ss_pred             cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCC-CcCeEEeecCCEEEEec
Confidence             11   1222221111  111122221 1 35778889999999999655443334433211 13467888878888888


Q ss_pred             CCCcEEEe
Q psy15417        168 WDSFLRIW  175 (176)
Q Consensus       168 ~d~~v~vw  175 (176)
                      .+..+.-|
T Consensus       194 ss~~l~~Y  201 (418)
T PF14727_consen  194 SSWTLECY  201 (418)
T ss_pred             CceeEEEe
Confidence            77666543

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=91.07  E-value=3.1  Score=27.38  Aligned_cols=113  Identities=9%  Similarity=0.100  Sum_probs=64.7

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCe--------eeeEecCCCCCeeEEEEcc---C--CcEEEEeeCCCcEEEeeC
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGS--------CKQTFPGHESDINAVTFFP---N--GWAFATGSDDATCRLFDI   91 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--------~~~~~~~h~~~v~~v~~~~---~--~~~l~s~s~d~~i~iwd~   91 (176)
                      .-+|......|+.++.-|+|.+++.....        .+..+. -...|++++--+   +  ...|+-| ....+..||+
T Consensus         3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliG-t~t~llaYDV   80 (136)
T PF14781_consen    3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIG-TQTSLLAYDV   80 (136)
T ss_pred             EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEe-ccceEEEEEc
Confidence            34566666678888888999999876432        223333 234566664433   2  2345555 4468889998


Q ss_pred             CCCCeeeEEeecceEeceEEEEECC----CCcEEEEEcCCCeEEEEeCCCceeeee
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSR----SGRLLLAGYDDFNCNVWDSMKTERAGI  143 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~g~~d~~i~v~d~~~~~~~~~  143 (176)
                      ..+..+.....+   .+++++.+-.    +.+++++| .+..|.-||.+-.+...+
T Consensus        81 ~~N~d~Fyke~~---DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~G~e~fWt  132 (136)
T PF14781_consen   81 ENNSDLFYKEVP---DGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYEGNEIFWT  132 (136)
T ss_pred             ccCchhhhhhCc---cceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCCCcEEEEE
Confidence            766543221222   3566665522    23444444 567788888665555444

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=90.78  E-value=1.6  Score=33.36  Aligned_cols=58  Identities=14%  Similarity=0.192  Sum_probs=41.6

Q ss_pred             eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEee-CCCcEEEeeCCCCCeeeEEe
Q psy15417         43 SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGS-DDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        43 ~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s-~d~~i~iwd~~~~~~~~~~~  101 (176)
                      .|.++|+.+++.+..+.. ..++.+++++.+.+ +|++.+ .++.+.+||..+++.+....
T Consensus       270 eVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~  329 (342)
T PF06433_consen  270 EVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE  329 (342)
T ss_dssp             EEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred             EEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence            367788999998888874 24578999998765 555544 57899999999987765543

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG2247|consensus

Probab=90.57  E-value=0.028  Score=44.44  Aligned_cols=140  Identities=12%  Similarity=0.127  Sum_probs=91.1

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCCCeee-EEee
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELA-MYSH  102 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~-~~~~  102 (176)
                      ...|-|.+.-++.++.+-.+..||-.... .-... .++....++|..++. .++-+-..+.+.+||+.++.... .+.-
T Consensus        39 ~~~w~~e~~nlavaca~tiv~~YD~agq~-~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg  116 (615)
T KOG2247|consen   39 IHRWRPEGHNLAVACANTIVIYYDKAGQV-ILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGG  116 (615)
T ss_pred             eeeEecCCCceehhhhhhHHHhhhhhcce-ecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccC
Confidence            34566777778888889899999965432 21111 234455667766654 34555567889999987653221 1111


Q ss_pred             cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417        103 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus       103 ~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      .. ..  .-..|++....++.|...+.+.+++....+..-....|..++.+.++.+.+ +.+.++.|.
T Consensus       117 ~~-s~--sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd-~vil~dcd~  180 (615)
T KOG2247|consen  117 TS-SK--SLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLED-YVILCDCDN  180 (615)
T ss_pred             cc-hH--HHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccc-eeeecCcHH
Confidence            11 11  126788888889999899999999976665555555588899999998875 555665554

>smart00564 PQQ beta-propeller repeat

Probab=90.40  E-value=1  Score=21.23  Aligned_cols=25  Identities=24%  Similarity=0.326  Sum_probs=20.9

Q ss_pred             EEEEEeCCCeEEEEEcCCCeeeeEe
Q psy15417         34 TFVSGACDASAKLWDIRDGSCKQTF   58 (176)
Q Consensus        34 ~l~s~s~dg~v~~wd~~~~~~~~~~   58 (176)
                      .++.++.+|.+..+|.++|+.+..+
T Consensus         8 ~v~~~~~~g~l~a~d~~~G~~~W~~   32 (33)
T smart00564        8 TVYVGSTDGTLYALDAKTGEILWTY   32 (33)
T ss_pred             EEEEEcCCCEEEEEEcccCcEEEEc
Confidence            5778888999999999999877654

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=90.38  E-value=0.97  Score=36.93  Aligned_cols=38  Identities=21%  Similarity=0.457  Sum_probs=28.2

Q ss_pred             cCeEEEEEcC----CCCEEEEEeCCCeEEEEEcCCCeeeeEe
Q psy15417         21 GDVMSLSLAP----DMRTFVSGACDASAKLWDIRDGSCKQTF   58 (176)
Q Consensus        21 ~~V~~~~~~~----~~~~l~s~s~dg~v~~wd~~~~~~~~~~   58 (176)
                      +.+..++++.    +..++++-+.|+++|+||+.++.++.+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred             CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence            3455566666    6789999999999999999999985544

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=89.72  E-value=6  Score=33.72  Aligned_cols=73  Identities=22%  Similarity=0.276  Sum_probs=51.0

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCC----------Cee---eeEe-------c-CCCCCeeEEEEccC---CcEE
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRD----------GSC---KQTF-------P-GHESDINAVTFFPN---GWAF   77 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~----------~~~---~~~~-------~-~h~~~v~~v~~~~~---~~~l   77 (176)
                      .|..+.++|+|.+++..+..|. .+-.+..          |+.   -+++       . .+...|..+.|+|.   +.+|
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~v-~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l  164 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRGV-VVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL  164 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCcE-EEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence            6778899999999988887664 4433321          111   1111       1 23457889999996   5789


Q ss_pred             EEeeCCCcEEEeeCCCCC
Q psy15417         78 ATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        78 ~s~s~d~~i~iwd~~~~~   95 (176)
                      +.=..|+++|+||+...+
T Consensus       165 ~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  165 VVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             EEEecCCEEEEEecCCCC
Confidence            999999999999986543

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF01011 PQQ: PQQ enzyme repeat family

Probab=89.38  E-value=1.4  Score=21.84  Aligned_cols=26  Identities=19%  Similarity=0.188  Sum_probs=22.3

Q ss_pred             EEEEeCCCeEEEEEcCCCeeeeEecC
Q psy15417         35 FVSGACDASAKLWDIRDGSCKQTFPG   60 (176)
Q Consensus        35 l~s~s~dg~v~~wd~~~~~~~~~~~~   60 (176)
                      ++.++.+|.+.-+|.++|+.+..++.
T Consensus         3 v~~~~~~g~l~AlD~~TG~~~W~~~~   28 (38)
T PF01011_consen    3 VYVGTPDGYLYALDAKTGKVLWKFQT   28 (38)
T ss_dssp             EEEETTTSEEEEEETTTTSEEEEEES
T ss_pred             EEEeCCCCEEEEEECCCCCEEEeeeC
Confidence            45668899999999999999988864

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=89.35  E-value=1.7  Score=21.66  Aligned_cols=31  Identities=16%  Similarity=0.180  Sum_probs=22.0

Q ss_pred             CCCCEEEEEe-CCCeEEEEEcCCCeeeeEecC
Q psy15417         30 PDMRTFVSGA-CDASAKLWDIRDGSCKQTFPG   60 (176)
Q Consensus        30 ~~~~~l~s~s-~dg~v~~wd~~~~~~~~~~~~   60 (176)
                      |+++.|+++. .+++|.++|..+++....+..
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v   32 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV   32 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence            4566555544 578899999988877776654

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=88.79  E-value=2.8  Score=29.90  Aligned_cols=47  Identities=19%  Similarity=0.119  Sum_probs=35.0

Q ss_pred             cEEEEEcCCCeEEEEeCC--CceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417        119 RLLLAGYDDFNCNVWDSM--KTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus       119 ~~l~~g~~d~~i~v~d~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      ..|+.+...+.|.+|++.  ..++...++.- +.|..++++..|+||+|=
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTl   77 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTL   77 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEE
Confidence            455454667789999987  34556666544 678899999999999875

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=88.28  E-value=11  Score=29.78  Aligned_cols=53  Identities=9%  Similarity=0.087  Sum_probs=37.0

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC-CCCeeEEEEccC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPN   73 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~   73 (176)
                      +++..|++||++++++.-..+|.+.+....-.+....+... ......+.|.-+
T Consensus       217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~  270 (410)
T PF04841_consen  217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGN  270 (410)
T ss_pred             CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECC
Confidence            67899999999999999998999888876555545444433 234455555543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=88.15  E-value=10  Score=29.06  Aligned_cols=103  Identities=15%  Similarity=0.145  Sum_probs=52.4

Q ss_pred             eeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe---eeEEe--ecceEeceEEEEECCC----CcEEEEEcCC------C-
Q psy15417         65 INAVTFFPNGWAFATGSDDATCRLFDIRADQE---LAMYS--HDNIICGITSVAFSRS----GRLLLAGYDD------F-  128 (176)
Q Consensus        65 v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~---~~~~~--~~~~~~~v~~~~~~~~----~~~l~~g~~d------~-  128 (176)
                      .++++|.|++..|++ ...|.|++.+ ..+..   +....  .......+..++++|+    +.++++.+..      . 
T Consensus         4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            578999999977665 5699999998 33332   11111  1112246788999995    4444444421      1 


Q ss_pred             -eEEEEeCCCc-------e-eeeeecC---CCccEEEEEEeCCCCEEEEccCC
Q psy15417        129 -NCNVWDSMKT-------E-RAGILAG---HDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus       129 -~i~v~d~~~~-------~-~~~~~~~---~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                       .|.-|.....       + .+...+.   ..-.-..++|.|+|.++++.+..
T Consensus        82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~  134 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDG  134 (331)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-T
T ss_pred             eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCC
Confidence             2222322111       1 1112222   11234568999999766665543

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=87.28  E-value=17  Score=30.91  Aligned_cols=112  Identities=9%  Similarity=0.012  Sum_probs=68.9

Q ss_pred             CeEEEEEc--CCCCEEEEEeCCCeEEEEEcCC-------C----e---------eeeEecCCCCCeeEEEEc--cCCcEE
Q psy15417         22 DVMSLSLA--PDMRTFVSGACDASAKLWDIRD-------G----S---------CKQTFPGHESDINAVTFF--PNGWAF   77 (176)
Q Consensus        22 ~V~~~~~~--~~~~~l~s~s~dg~v~~wd~~~-------~----~---------~~~~~~~h~~~v~~v~~~--~~~~~l   77 (176)
                      .|+-|...  .+...|+.|..||.|.+|..++       .    +         +-..++ ...++.+++++  ...+++
T Consensus       102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlI  180 (717)
T PF08728_consen  102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLI  180 (717)
T ss_pred             eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEE
Confidence            35555443  3556899999999999996521       0    0         011111 24578999999  888899


Q ss_pred             EEeeCCCcEEEeeCCCCC-eeeEE-eecceEeceEEEEECCCC------cEEEEEcCCCeEEEEeC
Q psy15417         78 ATGSDDATCRLFDIRADQ-ELAMY-SHDNIICGITSVAFSRSG------RLLLAGYDDFNCNVWDS  135 (176)
Q Consensus        78 ~s~s~d~~i~iwd~~~~~-~~~~~-~~~~~~~~v~~~~~~~~~------~~l~~g~~d~~i~v~d~  135 (176)
                      |.++....|.+|-....+ ..... ... ....|.+|.|-++.      ..+++++=.|.+-+|++
T Consensus       181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~-~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  181 AVSSNSQEVTVFAFALVDERFYHVPSHQ-HSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEecCCceEEEEEEeccccccccccccc-cccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            999999988887653321 11110 111 11245567765543      26777777787777765

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=87.19  E-value=11  Score=28.45  Aligned_cols=138  Identities=17%  Similarity=0.226  Sum_probs=76.7

Q ss_pred             EEEEcCCC-CEEEEEeCCCe-EEEEEcCCCeeeeEecCCCCC--eeEEEEccCCcEEEEeeCC-----CcEEEeeCCCC-
Q psy15417         25 SLSLAPDM-RTFVSGACDAS-AKLWDIRDGSCKQTFPGHESD--INAVTFFPNGWAFATGSDD-----ATCRLFDIRAD-   94 (176)
Q Consensus        25 ~~~~~~~~-~~l~s~s~dg~-v~~wd~~~~~~~~~~~~h~~~--v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~-   94 (176)
                      .+.|+|.. .-++-+=.-|+ ..++|.+..+...++...++.  .-.-.|+|+|.+|+..-.|     |.|-+||.+.. 
T Consensus        72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~f  151 (366)
T COG3490          72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGF  151 (366)
T ss_pred             CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccccc
Confidence            46677643 34555555566 457888776655444332211  1224699999988877554     46888998732 


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEE-e-------------------CCCceeeee--ec--CCCcc
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW-D-------------------SMKTERAGI--LA--GHDNR  150 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~-d-------------------~~~~~~~~~--~~--~~~~~  150 (176)
                      +.+.++.  .+-.+...+.+.+||+.++...  |-|... |                   ..++..+.+  ++  .+..+
T Consensus       152 qrvgE~~--t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lS  227 (366)
T COG3490         152 QRVGEFS--THGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLS  227 (366)
T ss_pred             ceecccc--cCCcCcceeEEecCCcEEEEeC--CceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcc
Confidence            1222332  2222445678889999887753  334433 2                   112222111  12  23456


Q ss_pred             EEEEEEeCCCCEEEEc
Q psy15417        151 VSCLGVTEDGMAVATG  166 (176)
Q Consensus       151 i~~~~~~~~~~~l~tg  166 (176)
                      +..++..++|....-+
T Consensus       228 iRHld~g~dgtvwfgc  243 (366)
T COG3490         228 IRHLDIGRDGTVWFGC  243 (366)
T ss_pred             eeeeeeCCCCcEEEEE
Confidence            7778888877665544

>KOG4460|consensus

Probab=86.90  E-value=6.5  Score=32.10  Aligned_cols=77  Identities=16%  Similarity=0.283  Sum_probs=50.6

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEE-----EEc----CCCeeeeE----------ecC-CCCCeeEEEEccCC---cEE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKL-----WDI----RDGSCKQT----------FPG-HESDINAVTFFPNG---WAF   77 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~-----wd~----~~~~~~~~----------~~~-h~~~v~~v~~~~~~---~~l   77 (176)
                      =.|..+..++.|..++-.+.+|.+..     |-.    ..|+...+          |.. ..-.+.-++|+|+.   .++
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL  183 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL  183 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence            35677888999999988888997643     322    22321111          111 11235568899974   678


Q ss_pred             EEeeCCCcEEEeeCCCCCee
Q psy15417         78 ATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        78 ~s~s~d~~i~iwd~~~~~~~   97 (176)
                      ..-+.|..||+||+.+..++
T Consensus       184 ~iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  184 VLLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             EEEecCcEEEEEecCCcchh
Confidence            88889999999998765444

>KOG3630|consensus

Probab=86.16  E-value=1.8  Score=38.17  Aligned_cols=101  Identities=14%  Similarity=0.093  Sum_probs=62.4

Q ss_pred             cCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeee-eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         21 GDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCK-QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        21 ~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      ....++.|.|. ....+.+..|+.+++..+...... ..++ -...+++++|+|.|+.++.|-..|++..|... .+...
T Consensus       156 vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~  233 (1405)
T KOG3630|consen  156 VFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKS  233 (1405)
T ss_pred             cccccccccCCccchhhhhccccchhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecc-cceee
Confidence            34557777774 345677788888887766433211 1222 34668999999999999999999999988643 22221


Q ss_pred             EE-eecce-EeceEEEEECCCCcEEEE
Q psy15417         99 MY-SHDNI-ICGITSVAFSRSGRLLLA  123 (176)
Q Consensus        99 ~~-~~~~~-~~~v~~~~~~~~~~~l~~  123 (176)
                      .. +.+.. ...|.++.|-....+++.
T Consensus       234 ~ip~Pp~~e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  234 EIPEPPVEENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             cccCCCcCCCcceeEEEEecceeEEEE
Confidence            11 11111 135777877655444433

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=85.92  E-value=14  Score=28.59  Aligned_cols=101  Identities=13%  Similarity=0.100  Sum_probs=51.5

Q ss_pred             CCeeEEEEccCCcEEEEee-----------CCC-cEEEeeCCCCC----eeeEEeecceEeceEEEEECCCCcEEEEEcC
Q psy15417         63 SDINAVTFFPNGWAFATGS-----------DDA-TCRLFDIRADQ----ELAMYSHDNIICGITSVAFSRSGRLLLAGYD  126 (176)
Q Consensus        63 ~~v~~v~~~~~~~~l~s~s-----------~d~-~i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~  126 (176)
                      .....++|.++|+.+++..           ..+ .|.+++-..+.    ....+.  ........+++.+++ +++ +..
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa--~~l~~p~Gi~~~~~G-lyV-~~~   89 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFA--EELSMVTGLAVAVGG-VYV-ATP   89 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEee--cCCCCccceeEecCC-EEE-eCC
Confidence            3456788999988777653           223 66666543221    111221  111224568888888 444 444


Q ss_pred             CCeEEEEeCCC-------ceeee-eecCC----CccEEEEEEeCCCCEEEEcc
Q psy15417        127 DFNCNVWDSMK-------TERAG-ILAGH----DNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus       127 d~~i~v~d~~~-------~~~~~-~~~~~----~~~i~~~~~~~~~~~l~tg~  167 (176)
                      ....++.|...       .+.+. .+...    ......+++.|+|.+.++-+
T Consensus        90 ~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        90 PDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             CeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            44344445321       12222 22221    23356788999987665444

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=85.91  E-value=11  Score=27.47  Aligned_cols=62  Identities=19%  Similarity=0.168  Sum_probs=39.5

Q ss_pred             cCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc
Q psy15417         72 PNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT  138 (176)
Q Consensus        72 ~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~  138 (176)
                      ..+..++.|..+| +.+++.............   .+|..+..-|+-..+++- .|++++++++..-
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~---~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l   66 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILKL---SSITQLSVLPELNLLLVL-SDGQLYVYDLDSL   66 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEeec---ceEEEEEEecccCEEEEE-cCCccEEEEchhh
Confidence            3567888888888 888888332222221111   236777777876666554 3589999996653

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG4460|consensus

Probab=85.19  E-value=20  Score=29.51  Aligned_cols=105  Identities=17%  Similarity=0.116  Sum_probs=60.7

Q ss_pred             CEEEEEeCCCeEEEEEcCCCe-eeeEecCCC---------------------CCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         33 RTFVSGACDASAKLWDIRDGS-CKQTFPGHE---------------------SDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        33 ~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~---------------------~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      +.++.|..| .+..||.+..- ....+++..                     -.|.-+..++.|..++-+|-+|-+-+.-
T Consensus        53 rN~~~~~gD-~lf~Wd~~ds~Llv~~lR~~~~~~~~~a~~q~q~l~P~~~V~feV~~vl~s~~GS~VaL~G~~Gi~vMeL  131 (741)
T KOG4460|consen   53 RNVVFGLGD-ELFLWDGEDSSLLVVRLRGPSGGGEEPALSQYQRLLPINPVLFEVYQVLLSPTGSHVALIGIKGLMVMEL  131 (741)
T ss_pred             cchhcccCC-EEEEEecCcceEEEEEeccCCCCcccccccccceeccCCcceEEEEEEEecCCCceEEEecCCeeEEEEc
Confidence            345666656 68888876442 222333211                     1245577788899888888887654432


Q ss_pred             C---------CCCCee---eEEeec------ceEeceEEEEECCCC---cEEEEEcCCCeEEEEeCCCc
Q psy15417         91 I---------RADQEL---AMYSHD------NIICGITSVAFSRSG---RLLLAGYDDFNCNVWDSMKT  138 (176)
Q Consensus        91 ~---------~~~~~~---~~~~~~------~~~~~v~~~~~~~~~---~~l~~g~~d~~i~v~d~~~~  138 (176)
                      .         ++++..   +.++..      ...-.+..++|||+.   ..+..-..|..||+||+..-
T Consensus       132 p~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~  200 (741)
T KOG4460|consen  132 PKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEP  200 (741)
T ss_pred             hhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecCcEEEEEecCCc
Confidence            1         122111   111111      111234567899985   57777788999999996543

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=84.25  E-value=20  Score=28.74  Aligned_cols=97  Identities=16%  Similarity=0.147  Sum_probs=50.7

Q ss_pred             CCeEEEEEcCCCeeeeEecCCC--CCeeEEEEccC--Cc-EEEEeeCCCcEEEeeC-CCCC----eeeEEeec-------
Q psy15417         41 DASAKLWDIRDGSCKQTFPGHE--SDINAVTFFPN--GW-AFATGSDDATCRLFDI-RADQ----ELAMYSHD-------  103 (176)
Q Consensus        41 dg~v~~wd~~~~~~~~~~~~h~--~~v~~v~~~~~--~~-~l~s~s~d~~i~iwd~-~~~~----~~~~~~~~-------  103 (176)
                      -.++.+||+.+.+.++++.--.  .-+..|.|..+  .. -|+.+....+|..|-- ..++    .+...+..       
T Consensus       221 G~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~l  300 (461)
T PF05694_consen  221 GHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWIL  300 (461)
T ss_dssp             --EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS--
T ss_pred             cCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccc
Confidence            4578999999999888876433  33567777644  33 3555555566655532 2211    11111110       


Q ss_pred             -ce-------EeceEEEEECCCCcEE-EEEcCCCeEEEEeCCC
Q psy15417        104 -NI-------ICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK  137 (176)
Q Consensus       104 -~~-------~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~  137 (176)
                       ..       ..-++.+.++.|.++| ++...+|.++-||+..
T Consensus       301 p~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISD  343 (461)
T PF05694_consen  301 PEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISD  343 (461)
T ss_dssp             -GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred             cccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence             00       1235778888888866 6688999999999765

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=83.85  E-value=3  Score=19.09  Aligned_cols=24  Identities=17%  Similarity=0.261  Sum_probs=18.8

Q ss_pred             EEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        152 SCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       152 ~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ..+++.++|..+++=+..++|++|
T Consensus         5 ~gvav~~~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    5 HGVAVDSDGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             EEEEEETTSEEEEEECCCTEEEEE
T ss_pred             cEEEEeCCCCEEEEECCCCEEEEC
Confidence            567788888888888888888775

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=83.78  E-value=5  Score=32.66  Aligned_cols=60  Identities=17%  Similarity=0.222  Sum_probs=45.7

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ..+++.||..|.|++||.---+....+++-...+..+....+|+++++.+. ..+.+-|++
T Consensus       573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~  632 (776)
T COG5167         573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP  632 (776)
T ss_pred             CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence            468999999999999996544455667777788999999999987665544 466666653

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=83.52  E-value=22  Score=28.69  Aligned_cols=54  Identities=15%  Similarity=0.238  Sum_probs=36.7

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee--eeEec----C-CCCCeeEEEEccCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC--KQTFP----G-HESDINAVTFFPNG   74 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~--~~~~~----~-h~~~v~~v~~~~~~   74 (176)
                      ..-+.|+|.||+.+|++--..|.|++++..++..  ...+.    . -...+.+++++|+=
T Consensus        30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF   90 (454)
T ss_pred             CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence            4457899999998877765569999998655432  21121    1 24668899999873

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>KOG1916|consensus

Probab=83.49  E-value=0.55  Score=40.28  Aligned_cols=114  Identities=12%  Similarity=0.131  Sum_probs=63.4

Q ss_pred             cCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCC--CCCe---eeEEeecceEeceEEEEECC---CCcEEEEEcCCCe
Q psy15417         59 PGHESDINAVTFFP-NGWAFATGSDDATCRLFDIR--ADQE---LAMYSHDNIICGITSVAFSR---SGRLLLAGYDDFN  129 (176)
Q Consensus        59 ~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~--~~~~---~~~~~~~~~~~~v~~~~~~~---~~~~l~~g~~d~~  129 (176)
                      ++.++.|-.++|.. +...+.  -.-|.+.+|++.  .++.   +.+.........+..+.|.|   +..++..+-.++.
T Consensus       129 kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~  206 (1283)
T KOG1916|consen  129 KGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGE  206 (1283)
T ss_pred             hcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCc
Confidence            45566677777742 111111  223567788753  2221   11111111111233344443   5556667778888


Q ss_pred             EEEEeCCCceeeeeecCCCccEEEE-----------EEeCCCCEEEEccCCCcEEEe
Q psy15417        130 CNVWDSMKTERAGILAGHDNRVSCL-----------GVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       130 i~v~d~~~~~~~~~~~~~~~~i~~~-----------~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      +++.+..+... ..+.+|..++..+           .++|||..+|..+.||.++.|
T Consensus       207 i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~  262 (1283)
T KOG1916|consen  207 IRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFY  262 (1283)
T ss_pred             eeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCcccee
Confidence            88877544433 4445565544333           368999999999999999877

>KOG1900|consensus

Probab=83.32  E-value=28  Score=31.70  Aligned_cols=135  Identities=14%  Similarity=0.255  Sum_probs=75.6

Q ss_pred             CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEc--------cCCcEEEEeeCCCcEEEeeCCCCC---eeeEE------ee
Q psy15417         40 CDASAKLWDIRDGSCKQTFPGHESDINAVTFF--------PNGWAFATGSDDATCRLFDIRADQ---ELAMY------SH  102 (176)
Q Consensus        40 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~--------~~~~~l~s~s~d~~i~iwd~~~~~---~~~~~------~~  102 (176)
                      -|..+.+|+.+++.....+.+-...|..|...        |.-+++...+.--.+.++-+.-++   ....+      +.
T Consensus        97 iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~  176 (1311)
T KOG1900|consen   97 IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKISV  176 (1311)
T ss_pred             eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeeec
Confidence            37889999999865555555544445555443        222333333333344444321110   01111      11


Q ss_pred             cceEeceEEEEECCCCcEEEEEcCCCeEE-EEeCCCce------e--------------eeeec-CCCccEEEEEEeCCC
Q psy15417        103 DNIICGITSVAFSRSGRLLLAGYDDFNCN-VWDSMKTE------R--------------AGILA-GHDNRVSCLGVTEDG  160 (176)
Q Consensus       103 ~~~~~~v~~~~~~~~~~~l~~g~~d~~i~-v~d~~~~~------~--------------~~~~~-~~~~~i~~~~~~~~~  160 (176)
                      ++  ..|++++...+|++|++|-.++.-- +|..+.+.      .              +..+. .+..+|..+++...-
T Consensus       177 dg--~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR  254 (1311)
T KOG1900|consen  177 DG--VSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSR  254 (1311)
T ss_pred             CC--ceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecccc
Confidence            11  3477888888999999986653211 23322211      0              11122 456688889998887


Q ss_pred             CEEEEccCCCcEEEeC
Q psy15417        161 MAVATGSWDSFLRIWN  176 (176)
Q Consensus       161 ~~l~tg~~d~~v~vwd  176 (176)
                      +.+.+=+..++|++||
T Consensus       255 ~IlY~lsek~~v~~Y~  270 (1311)
T KOG1900|consen  255 NILYVLSEKGTVSAYD  270 (1311)
T ss_pred             ceeeeeccCceEEEEE
Confidence            8888888899999986

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=82.98  E-value=3.4  Score=19.02  Aligned_cols=26  Identities=19%  Similarity=0.411  Sum_probs=19.6

Q ss_pred             ccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        149 NRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       149 ~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.|.+++..+  .+++.+..-+.+|+|.
T Consensus         2 E~i~aia~g~--~~vavaTS~~~lRifs   27 (27)
T PF12341_consen    2 EEIEAIAAGD--SWVAVATSAGYLRIFS   27 (27)
T ss_pred             ceEEEEEccC--CEEEEEeCCCeEEecC
Confidence            3467777664  4888888888999984

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=81.82  E-value=24  Score=27.91  Aligned_cols=27  Identities=15%  Similarity=0.325  Sum_probs=22.7

Q ss_pred             cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        150 RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       150 ~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .|..++..+....+.+-..++.|.+|+
T Consensus       191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~  217 (422)
T PF08801_consen  191 KIVQVAVDPSRRLLYTLTSDGSIQVWD  217 (422)
T ss_dssp             -EEEEEEETTTTEEEEEESSE-EEEEE
T ss_pred             ceeeEEecCCcCEEEEEeCCCcEEEEE
Confidence            388889988888999999999999996

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>KOG2377|consensus

Probab=81.31  E-value=18  Score=29.23  Aligned_cols=98  Identities=8%  Similarity=0.164  Sum_probs=56.4

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe----eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS----CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      -+++|.++.||+|.+.++.--.+.+|.+.+..--+    ...+.+..+..+-+.+|..+.. ++-.... .+.+|....+
T Consensus        65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e-~A~i~~~-G~e~y~v~pe  142 (657)
T KOG2377|consen   65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTE-IAFITDQ-GIEFYQVLPE  142 (657)
T ss_pred             CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCee-EEEEecC-CeEEEEEchh
Confidence            45799999999999999999999999999983221    1222333345577778876633 3333332 2444443222


Q ss_pred             Ce-eeEEeecceEeceEEEEECCCCcE
Q psy15417         95 QE-LAMYSHDNIICGITSVAFSRSGRL  120 (176)
Q Consensus        95 ~~-~~~~~~~~~~~~v~~~~~~~~~~~  120 (176)
                      .. ++..  +.+...|+...|.++...
T Consensus       143 krslRlV--ks~~~nvnWy~yc~et~v  167 (657)
T KOG2377|consen  143 KRSLRLV--KSHNLNVNWYMYCPETAV  167 (657)
T ss_pred             hhhhhhh--hhcccCccEEEEccccce
Confidence            11 1111  112234566666666553

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=81.19  E-value=25  Score=28.43  Aligned_cols=107  Identities=15%  Similarity=0.120  Sum_probs=66.2

Q ss_pred             CCCCEEEEEeCCCeEEEE-EcCCCe-----eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417         30 PDMRTFVSGACDASAKLW-DIRDGS-----CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        30 ~~~~~l~s~s~dg~v~~w-d~~~~~-----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~  103 (176)
                      ..+..|+.++.||.|.-| |++.+.     .++.++-...++..+.-..+.+-|++-...|++..+...++..+. ++..
T Consensus       278 ~Gg~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL-~~~~  356 (733)
T COG4590         278 SGGFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL-FERA  356 (733)
T ss_pred             hCceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCccee-hhhh
Confidence            345678899999999766 554331     233333333445444433446678888888998887655444332 2211


Q ss_pred             ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee
Q psy15417        104 NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER  140 (176)
Q Consensus       104 ~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~  140 (176)
                        .....-++++|.+.+++.- ..|.|+++.+++..+
T Consensus       357 --~~~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~P  390 (733)
T COG4590         357 --YQAPQLVAMSPNQAYLLSE-DQGKIRLAQLENRNP  390 (733)
T ss_pred             --hcCcceeeeCcccchheee-cCCceEEEEecCCCC
Confidence              1235568899999888775 446788988766543

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=80.70  E-value=22  Score=26.71  Aligned_cols=96  Identities=14%  Similarity=0.233  Sum_probs=52.4

Q ss_pred             CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee------CCCcEEEeeCCCCCeeeEEee---cceEeceEEE
Q psy15417         42 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS------DDATCRLFDIRADQELAMYSH---DNIICGITSV  112 (176)
Q Consensus        42 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s------~d~~i~iwd~~~~~~~~~~~~---~~~~~~v~~~  112 (176)
                      ..|++||..+.+=...-.+-.+.|+++.|..+.+.++.|.      ....+-.||+.+. .......   .....++..+
T Consensus        16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~-~w~~~~~~~s~~ipgpv~a~   94 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ-TWSSLGGGSSNSIPGPVTAL   94 (281)
T ss_pred             CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC-eeeecCCcccccCCCcEEEE
Confidence            4589999877643322223457899999987777777664      3456777887653 2222211   1112345555


Q ss_pred             EECC-CC-cEEEEEc-CC--CeEEEEeCCCc
Q psy15417        113 AFSR-SG-RLLLAGY-DD--FNCNVWDSMKT  138 (176)
Q Consensus       113 ~~~~-~~-~~l~~g~-~d--~~i~v~d~~~~  138 (176)
                      .+.. +. .+.++|. .+  ..+..||-...
T Consensus        95 ~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W  125 (281)
T PF12768_consen   95 TFISNDGSNFWVAGRSANGSTFLMKYDGSSW  125 (281)
T ss_pred             EeeccCCceEEEeceecCCCceEEEEcCCce
Confidence            5422 23 3444443 22  34667774443

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=80.61  E-value=13  Score=31.60  Aligned_cols=73  Identities=11%  Similarity=0.126  Sum_probs=51.9

Q ss_pred             CccCeEEEEEc--CCCCEEEEEeCCCeEEEEEcCCC--ee-eeEecCCCCCeeEEEEccCC------cEEEEeeCCCcEE
Q psy15417         19 HTGDVMSLSLA--PDMRTFVSGACDASAKLWDIRDG--SC-KQTFPGHESDINAVTFFPNG------WAFATGSDDATCR   87 (176)
Q Consensus        19 h~~~V~~~~~~--~~~~~l~s~s~dg~v~~wd~~~~--~~-~~~~~~h~~~v~~v~~~~~~------~~l~s~s~d~~i~   87 (176)
                      ....++.++++  ...+++|+++....|-||-+...  +. ...-..|...|.+|+|-++.      .++++++-.|.+.
T Consensus       162 v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~  241 (717)
T PF08728_consen  162 VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVW  241 (717)
T ss_pred             cCCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEE
Confidence            34578999998  78888888888888877765542  11 11111255678999998643      2788899999998


Q ss_pred             EeeC
Q psy15417         88 LFDI   91 (176)
Q Consensus        88 iwd~   91 (176)
                      +|++
T Consensus       242 ~~~I  245 (717)
T PF08728_consen  242 TFKI  245 (717)
T ss_pred             EEEE
Confidence            8887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	176
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		1e-79
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		1e-79
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		1e-79
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		1e-79
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		1e-79
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		2e-50
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		6e-42
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-19
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		3e-17
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		4e-17
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		4e-17
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		4e-17
2g99_A	308	Structural Basis For The Specific Recognition Of Me		4e-17
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		4e-17
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		4e-17
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		4e-17
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		4e-17
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		4e-17
2gnq_A	336	Structure Of Wdr5 Length = 336		4e-17
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		4e-17
2h9l_A	329	Wdr5delta23 Length = 329		4e-17
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		5e-17
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		5e-17
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		6e-17
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		6e-17
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		8e-17
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		5e-15
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-12
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-12
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		8e-11
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		1e-10
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		2e-10
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		2e-10
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		2e-10
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		2e-10
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		2e-10
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		2e-10
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		2e-10
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		8e-10
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		8e-10
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		1e-09
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		1e-09
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		2e-09
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		2e-08
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		6e-08
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		6e-08
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		1e-07
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		1e-07
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		5e-07
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		7e-07
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		9e-07
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		2e-06
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		6e-06
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		2e-06
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		6e-06
3zwl_B	369	Structure Of Eukaryotic Translation Initiation Fact		1e-05
3vl1_A	420	Crystal Structure Of Yeast Rpn14 Length = 420		1e-05
3acp_A	417	Crystal Structure Of Yeast Rpn14, A Chaperone Of Th		1e-05
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		2e-05
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		2e-05
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		3e-05
4a11_B	408	Structure Of The Hsddb1-Hscsa Complex Length = 408		2e-04
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		2e-04
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		3e-04
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		3e-04
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		3e-04
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		3e-04
3cfs_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		7e-04
3cfv_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		8e-04
3mmy_A	368	Structural And Functional Analysis Of The Interacti		9e-04

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score =  291 bits (746), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 136/158 (86%), Positives = 149/158 (94%)
Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
           HTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG AFA
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 79  TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
           TGSDDATCRLFD+RADQEL  YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++K 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score =  291 bits (746), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 136/158 (86%), Positives = 149/158 (94%)
Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
           HTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG AFA
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 79  TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
           TGSDDATCRLFD+RADQEL  YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++K 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score =  291 bits (746), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 136/158 (86%), Positives = 149/158 (94%)
Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
           HTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG AFA
Sbjct: 194 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 253
Query: 79  TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
           TGSDDATCRLFD+RADQEL  YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++K 
Sbjct: 254 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 313
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 314 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 351

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score =  291 bits (745), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 136/158 (86%), Positives = 149/158 (94%)
Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
           HTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG AFA
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 79  TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
           TGSDDATCRLFD+RADQEL  YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++K 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score =  291 bits (745), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 136/158 (86%), Positives = 149/158 (94%)
Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
           HTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG AFA
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 79  TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
           TGSDDATCRLFD+RADQEL  YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++K 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score =  194 bits (494), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 93/160 (58%), Positives = 117/160 (73%), Gaps = 2/160 (1%)
Query: 18  GHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW 75
           GH  DV+ L LAP     TFVSG CD  A +WD+R G C Q F  HESD+N+V ++P+G 
Sbjct: 194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD 253
Query: 76  AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS 135
           AFA+GSDDATCRL+D+RAD+E+A+YS ++II G +SV FS SGRLL AGY+D+  NVWD 
Sbjct: 254 AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 313
Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
           +K  R  IL GH+NRVS L V+ DG A  +GSWD  LR+W
Sbjct: 314 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score =  166 bits (420), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 121/181 (66%), Gaps = 11/181 (6%)
Query: 6   DKSALLGSPAASGHTGDVMSLSL-APDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHES 63
            + ++ GS   SGHT DV+SLS+ + +   F+SG+CD + +LWD+R  S   +T+ GHE 
Sbjct: 191 QRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG 250
Query: 64  DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-----HDNIICGITSVAFSRSG 118
           DIN+V FFP+G  F TGSDD TCRLFD+R   +L +Y+     +DN +  +TSVAFS SG
Sbjct: 251 DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISG 310
Query: 119 RLLLAGYDDFNCNVWDSMKTERA---GILAG-HDNRVSCLGVTEDGMAVATGSWDSFLRI 174
           RLL AGY + +C VWD++  E     G L   H+ R+SCLG++ DG A+ TGSWD  L+I
Sbjct: 311 RLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKI 370
Query: 175 W 175
           W
Sbjct: 371 W 371

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 5/160 (3%)
Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           +GH+  V  ++ +PD +T  S + D + KLW+ R+G   QT  GH S +N V F P+G  
Sbjct: 218 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVNGVAFRPDGQT 276
Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
            A+ SDD T +L++        +  H + + G   VAFS  G+ + +  DD    +W+  
Sbjct: 277 IASASDDKTVKLWNRNGQLLQTLTGHSSSVWG---VAFSPDGQTIASASDDKTVKLWN-R 332
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             +    L GH + V  +  + DG  +A+ S D  +++WN
Sbjct: 333 NGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 111 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 170
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 171 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 229
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 230 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 271

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 106 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 165
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 166 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 224
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 225 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 266

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 110 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 169
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 170 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 228
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 229 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 270

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 105 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 164
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 165 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 223
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 224 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 265

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 101 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 160
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 161 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 219
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 220 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 261

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 104 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 163
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 164 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 222
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 223 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 264

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 111 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 170
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 171 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 229
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 230 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 271

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 105 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 164
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 165 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 223
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 224 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 265

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 127 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 245
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 246 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 111 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 170
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 171 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 229
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 230 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 271

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 129 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 188
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 189 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 247
Query: 138 TERAGILAGHDNRVSCL----GVTEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+     VT  G  + +GS D+ + IWN
Sbjct: 248 GKCLKTYTGHKNEKYCIFANFSVT-GGKWIVSGSEDNLVYIWN 289

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 167
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 168 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 226
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 227 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 268

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 122 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 181
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 182 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 240
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 241 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 282

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 84.0 bits (206), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 167
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 168 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 226
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 227 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 268

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 84.0 bits (206), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 167
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 168 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 226
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 227 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 268

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 83.6 bits (205), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 23  VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
           + S+  +PD +   +GA D   ++WDI +        GHE DI ++ +FP+G    +GS 
Sbjct: 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 185
Query: 83  DATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTER 140
           D T R++D+R  Q  L +   D    G+T+VA S   G+ + AG  D    VWDS     
Sbjct: 186 DRTVRIWDLRTGQCSLTLSIED----GVTTVAVSPGDGKYIAAGSLDRAVRVWDS----E 237
Query: 141 AGILA-----------GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            G L            GH + V  +  T DG +V +GS D  +++WN
Sbjct: 238 TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 83.6 bits (205), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLI 167
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D +  +WD  K
Sbjct: 168 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNDLKLWDYSK 226
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 227 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 268

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 83.2 bits (204), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V   +  P     VSG+ D S ++WD++ G C +T P H   ++AV F  +G   
Sbjct: 108 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLI 167
Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
            + S D  CR++D  + Q L     D+    ++ V FS +G+ +LA   D    +WD  K
Sbjct: 168 VSSSYDGLCRIWDTASGQCLKTLIDDDNP-PVSFVKFSPNGKYILAATLDNTLKLWDYSK 226
Query: 138 TERAGILAGHDNRVSCLGV---TEDGMAVATGSWDSFLRIWN 176
            +      GH N   C+        G  + +GS D+ + IWN
Sbjct: 227 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 268

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTG V S  +  ++   +SG+ D + K+W+   G C  T  GH S +  +         
Sbjct: 157 GHTGGVWSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK--RV 212
Query: 78  ATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
            +GS DAT R++DI   Q L  +  H   +  +  V +   GR +++G  DF   VWD  
Sbjct: 213 VSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQY--DGRRVVSGAYDFMVKVWDPE 267
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
                  L GH NRV  L    DG+ V +GS D+ +R+W+
Sbjct: 268 TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWD 305

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GH+  V  ++L+ +    VS + D S +LW++++G C+  F GH  D+ +V F P+    
Sbjct: 65  GHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQI 124
Query: 78  ATGSDDATCRLFDIRAD--QELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVW 133
            +G  D   R+++++ +    L+  +H +    ++ V FS S    ++++G  D    VW
Sbjct: 125 VSGGRDNALRVWNVKGECMHTLSRGAHTDW---VSCVRFSPSLDAPVIVSGGWDNLVKVW 181
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           D         L GH N V+ + V+ DG   A+   D   R+W+
Sbjct: 182 DLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWD 224

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
           A SGH   V  +   P     VS + DA+ K+WD   G  ++T  GH   +  ++F  +G
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 75  WAFATGSDDATCRLFDIRADQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
              A+ S D T +L+D +  + +  M+ HD+    ++SV+   +G  +++   D    +W
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDH---NVSSVSIMPNGDHIVSASRDKTIKMW 219
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
           +           GH   V  +   +DG  +A+ S D  +R+W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
Query: 11  LGSPAAS--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
            G P  S  GH+  V   +L  D    +S + D + +LWD+  G   Q F GH+SD+ +V
Sbjct: 54  FGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSV 113
Query: 69  TFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS---GRLLLAGY 125
                     +GS D T +++ I+      +  H++ +  +  V   ++      +++  
Sbjct: 114 DIDKKASXIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173
Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +D     W+  + +      GH++ ++ L  + DG  +A+   D  + +WN
Sbjct: 174 NDKXVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIXLWN 224

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 11  LGSPAAS--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
            G P  S  GH+  V   +L  D    +S + D + +LWD+  G   Q F GH+SD+ +V
Sbjct: 54  FGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSV 113
Query: 69  TFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR----SGRLLLAG 124
                     +GS D T +++ I+      +  H++ +  +  V   +    S  ++ AG
Sbjct: 114 DIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173
Query: 125 YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            D      W+  + +      GH++ ++ L  + DG  +A+   D  + +WN
Sbjct: 174 NDKM-VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWN 224

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 11  LGSPAAS--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
            G P  S  GH+  V   +L  D    +S + D + +LWD+  G   Q F GH+SD+ +V
Sbjct: 54  FGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSV 113
Query: 69  TFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR----SGRLLLAG 124
                     +GS D T +++ I+      +  H++ +  +  V   +    S  ++ AG
Sbjct: 114 DIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173
Query: 125 YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            D      W+  + +      GH++ ++ L  + DG  +A+   D  + +WN
Sbjct: 174 NDKM-VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWN 224

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 11  LGSPAAS--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
            G P  S  GH+  V   +L  D    +S + D + +LWD+  G   Q F GH+SD+ +V
Sbjct: 54  FGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSV 113
Query: 69  TFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR----SGRLLLAG 124
                     +GS D T +++ I+      +  H++ +  +  V   +    S  ++ AG
Sbjct: 114 DIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173
Query: 125 YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            D      W+  + +      GH++ ++ L  + DG  +A+   D  + +WN
Sbjct: 174 NDKM-VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWN 224

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 11  LGSPAAS--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
            G P  S  GH+  V   +L  D    +S + D + +LWD+  G   Q F GH+SD+ +V
Sbjct: 48  FGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSV 107
Query: 69  TFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR----SGRLLLAG 124
                     +GS D T +++ I+      +  H++ +  +  V   +    S  ++ AG
Sbjct: 108 DIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 167
Query: 125 YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            D      W+  + +      GH++ ++ L  + DG  +A+   D  + +WN
Sbjct: 168 NDKM-VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWN 218

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS----CKQTFPGHESDINAVTFFP 72
           SGH+ +V  L  APD R   SG  D    +W    G       QTF  H+  + AV + P
Sbjct: 147 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCP 206
Query: 73  ---NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 129
              N  A   G+ D   R++++ +   L+     + +C   S+ +S   + L++G+  F 
Sbjct: 207 WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVC---SILWSPHYKELISGHG-FA 262
Query: 130 CN---VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
            N   +W      +   L GH +RV  L ++ DG  VA+ + D  LR+W
Sbjct: 263 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 311

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 11  LGSPAAS--GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV 68
            G P  S  GH+  V   +L  D    +S + D + +LWD+  G   Q F GH+SD+ +V
Sbjct: 54  FGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSV 113
Query: 69  TFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR----SGRLLLAG 124
                     +GS D T +++ I+      +  H++ +  +  V   +    S  ++ AG
Sbjct: 114 DIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG 173
Query: 125 YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            D      W+  + +      GH++ ++ L  + DG  +A+   D  + +WN
Sbjct: 174 NDKM-VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWN 224

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS----CKQTFPGHESDINAVTFFP 72
           SGH+ +V  L  APD R   SG  D    +W    G       QTF  H+  + AV + P
Sbjct: 227 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCP 286
Query: 73  ---NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 129
              N  A   G+ D   R++++ +   L+     + +C   S+ +S   + L++G+  F 
Sbjct: 287 WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVC---SILWSPHYKELISGHG-FA 342
Query: 130 CN---VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
            N   +W      +   L GH +RV  L ++ DG  VA+ + D  LR+W
Sbjct: 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 391

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS----CKQTFPGHESDINAVTFFP 72
           SGH+ +V  L  APD R   SG  D    +W    G       QTF  H+  + AV + P
Sbjct: 238 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCP 297
Query: 73  ---NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 129
              N  A   G+ D   R++++ +   L+     + +C   S+ +S   + L++G+  F 
Sbjct: 298 WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVC---SILWSPHYKELISGHG-FA 353
Query: 130 CN---VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
            N   +W      +   L GH +RV  L ++ DG  VA+ + D  LR+W
Sbjct: 354 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 402

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 6   DKSALLGSP--AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES 63
           +++   G P  A +GH   V  L+L+ +    +S + D + +LWD+R G+  + F GH+S
Sbjct: 60  EQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS 119
Query: 64  DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS---RSGRL 120
           ++ +V F P+     +   +   +L++I  + + +    +N    ++ V +S   +S   
Sbjct: 120 EVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANK 179
Query: 121 L--LAGYD-----DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR 173
           +   A Y      D    VW++    R    A H++ V+ L ++ +G  +ATG  D  L 
Sbjct: 180 VQPFAPYFASVGWDGRLKVWNTNFQIRYTFKA-HESNVNHLSISPNGKYIATGGKDKKLL 238
Query: 174 IWN 176
           IW+
Sbjct: 239 IWD 241

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 2/160 (1%)
Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
            GH   V+S+ ++  +    S + DA  +LWD+ +G   ++      D   + F P+   
Sbjct: 77  EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY 136
Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
            ATG+      +F + + ++   YS D     I S+A+S  G+ L +G  D   N++D  
Sbjct: 137 LATGTHVGKVNIFGVESGKK--EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 194
Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             +    L GH   +  L  + D   + T S D +++I++
Sbjct: 195 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 234

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
Query: 6   DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
           DK+  +     +GH+  V  + L+ D +  +SG+ D   +LWD+  G   + F GH  D+
Sbjct: 416 DKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV 475
Query: 66  NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS----HDNIICGITSVAFSRSGRLL 121
            +V F  +     + S D T +L++   + +  +      H + +  +     +    ++
Sbjct: 476 LSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535
Query: 122 LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            A +D     VW+    +    LAGH   VS + V+ DG   A+G  D  + +W+
Sbjct: 536 SASWDK-TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD 589

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 25/197 (12%)
Query: 1   MCDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG 60
           + D ++K  LL     SGH G V +L  A      VSG+ D + ++WDI+ G C   F G
Sbjct: 146 VYDSINKKFLL---QLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEG 201
Query: 61  HESDINA--VTFFPNGWAFATGSDDATCRLFDI-----------RADQELAMYSHDN--- 104
           H S +    +  + N     TGS D T  ++ +             D  L  ++ +    
Sbjct: 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 261
Query: 105 ---IICG-ITSV-AFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED 159
              ++ G + SV   S  G ++++G  D    VWD  + +   IL+GH +R+       +
Sbjct: 262 FVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE 321
Query: 160 GMAVATGSWDSFLRIWN 176
                + S D+ +RIW+
Sbjct: 322 RKRCISASMDTTIRIWD 338

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 25/197 (12%)
Query: 1   MCDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG 60
           + D ++K  LL     SGH G V +L  A      VSG+ D + ++WDI+ G C   F G
Sbjct: 146 VYDSINKKFLL---QLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEG 201
Query: 61  HESDINA--VTFFPNGWAFATGSDDATCRLFDI-----------RADQELAMYSHDN--I 105
           H S +    +  + N     TGS D T  ++ +             D  L  ++ +    
Sbjct: 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 261
Query: 106 ICGI------TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED 159
             G+      +    S  G ++++G  D    VWD  + +   IL+GH +R+       +
Sbjct: 262 FVGVLRGHXASVRTVSGHGNIVVSGSYDNTLIVWDVAQXKCLYILSGHTDRIYSTIYDHE 321
Query: 160 GMAVATGSWDSFLRIWN 176
                + S D+ +RIW+
Sbjct: 322 RKRCISASXDTTIRIWD 338

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 6   DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI 65
           DK+ L      +GHTG V+ L    D R  ++G+ D++ ++WD+  G    T   H   +
Sbjct: 159 DKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV 216
Query: 66  NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICG----ITSVAFSRSGRLL 121
             + F  N     T S D +  ++D+ +  ++ +     ++ G    +  V F    + +
Sbjct: 217 LHLRF--NNGMMVTCSKDRSIAVWDMASPTDITL---RRVLVGHRAAVNVVDFD--DKYI 269
Query: 122 LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           ++   D    VW++   E    L GH   ++CL   +    V +GS D+ +R+W+
Sbjct: 270 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD 322

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
           A  GH+  V  + ++ D +  +SG+ D + +LWD+  G+  + F GH  D+ +V F  + 
Sbjct: 81  ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 140
Query: 75  WAFATGSDDATCRLFDIRADQELAMY--SHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
               +GS D T +L++     +  +   SH   +  +     S +  ++  G+D     V
Sbjct: 141 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL-VKV 199
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           W+    +      GH   ++ + V+ DG   A+G  D    +W+
Sbjct: 200 WNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 243

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
           A  GH+  V  + ++ D +  +SG+ D + +LWD+  G+  + F GH  D+ +V F  + 
Sbjct: 58  ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 117
Query: 75  WAFATGSDDATCRLFDIRADQELAMY--SHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
               +GS D T +L++     +  +   SH   +  +     S +  ++  G+D     V
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL-VKV 176
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           W+    +      GH   ++ + V+ DG   A+G  D    +W+
Sbjct: 177 WNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 3/163 (1%)
Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFPNGW 75
             H   + S+++ P     +SG+ D + KLW+  +  + +QTF GHE  +  V F P   
Sbjct: 94  EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP 153
Query: 76  A-FATGSDDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
           + FA+G  D T +++ + ++     + +                   ++   DD    +W
Sbjct: 154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           D         L GH + VS          + +GS D  L+IWN
Sbjct: 214 DYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 3/163 (1%)
Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFPNGW 75
             H   + S+++ P     +SG+ D + KLW+  +  + +QTF GHE  +  V F P   
Sbjct: 94  EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP 153
Query: 76  A-FATGSDDATCRLFDI-RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
           + FA+G  D T +++ + ++     + +                   ++   DD    +W
Sbjct: 154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213
Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           D         L GH + VS          + +GS D  L+IWN
Sbjct: 214 DYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
Query: 8   SALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR--DGSCKQTFPGHESDI 65
           S +  S  + GH   V  ++ +P      S + DA+  +W     D  C  T  GHE+++
Sbjct: 49  SWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEV 108
Query: 66  NAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNI-ICGITSVAFSRSGRLLL-A 123
            +V + P+G   AT S D +  ++++  + E    S  N     +  V +  S  LL  A
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168
Query: 124 GYDDFNCNVWDSMKTERA--------GILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
            YD       D++K  R           L GH++ V  L     G  +A+ S D  +RIW
Sbjct: 169 SYD-------DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFP-NGW 75
            H   + S+++ P     +SG+ D + KLW+  +  + +QTF GHE  +  V F P +  
Sbjct: 95  AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154
Query: 76  AFATGSDDATCRLFDI-RADQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNV 132
            FA+G  D T +++ + ++     + +      G+  V +        ++   DD    +
Sbjct: 155 TFASGCLDRTVKVWSLGQSTPNFTLTTGQER--GVNYVDYYPLPDKPYMITASDDLTIKI 212
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           WD         L GH + VS          + +GS D  L+IWN
Sbjct: 213 WDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFP-NGW 75
            H   + S+++ P     +SG+ D + KLW+  +  + +QTF GHE  +  V F P +  
Sbjct: 95  AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154
Query: 76  AFATGSDDATCRLFDI-RADQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNV 132
            FA+G  D T +++ + ++     + +      G+  V +        ++   DD    +
Sbjct: 155 TFASGCLDRTVKVWSLGQSTPNFTLTTGQER--GVNYVDYYPLPDKPYMITASDDLTIKI 212
Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           WD         L GH + VS          + +GS D  L+IWN
Sbjct: 213 WDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN 256

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 19   HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
            H G V+S +++ D   F S + D +AK+W     S      GH   +    F  +G   A
Sbjct: 1084 HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA 1143
Query: 79   TGSDDATCRLFDIRADQEL 97
            TG D+   R++++   Q L
Sbjct: 1144 TGDDNGEIRIWNVSDGQLL 1162

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
           HT  V     + D +   S   D + +++    G        HE ++    F  +    A
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 673
Query: 79  TGSDDATCRLFDIRADQELAMY-SHDNII--CGITSVAFSRSGRLLLA-GYDDFNCNVWD 134
           T S D   +++D    + +  Y  H   +  C  T+    +S  LLLA G +DF   +WD
Sbjct: 674 TCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTN----KSNHLLLATGSNDFFLKLWD 729
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             + E    + GH N V+    + D   +A+ S D  LR+W+
Sbjct: 730 LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 19   HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
            H G V+S +++ D   F S + D +AK+W     S      GH   +    F  +G   A
Sbjct: 1091 HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA 1150
Query: 79   TGSDDATCRLFDIRADQEL 97
            TG D+   R++++   Q L
Sbjct: 1151 TGDDNGEIRIWNVSDGQLL 1169

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
           HT  V     + D +   S   D + +++    G        HE ++    F  +    A
Sbjct: 621 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 680
Query: 79  TGSDDATCRLFDIRADQELAMY-SHDNII--CGITSVAFSRSGRLLLA-GYDDFNCNVWD 134
           T S D   +++D    + +  Y  H   +  C  T+    +S  LLLA G +DF   +WD
Sbjct: 681 TCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTN----KSNHLLLATGSNDFFLKLWD 736
Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             + E    + GH N V+    + D   +A+ S D  LR+W+
Sbjct: 737 LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 778

>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 20/174 (11%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF 77
           GHTG + S+ +    +  V+G+ D S KLWD+ +G C  T+      +  V F P G  F
Sbjct: 72  GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKS-PVPVKRVEFSPCGNYF 130
Query: 78  ATGSDDA-----TCRLFDIRAD---QELAMYSHDNIICGIT-------SVA-FSRSGRLL 121
               D+      +  +++I  D    EL   S + I   IT       +VA +S  G+ +
Sbjct: 131 LAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYI 190
Query: 122 LAGYDDFNCNVWD-SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD--SFL 172
           +AG+ D   + +D S   E    +  H+  +S +  + D     T S D  SFL
Sbjct: 191 IAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFL 244

>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14 Length = 420

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 5   LDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD 64
           LD +  L       H  ++  L   P     +S + D   K+W ++DGS  +T  GH + 
Sbjct: 124 LDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRAT 183
Query: 65  INAVTFFPNGWAFATGSDDATCRLFD 90
           +  +     G    + S D T RL++
Sbjct: 184 VTDIAIIDRGRNVLSASLDGTIRLWE 209

>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg Particle Of The Proteasome Length = 417

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 5   LDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD 64
           LD +  L       H  ++  L   P     +S + D   K+W ++DGS  +T  GH + 
Sbjct: 121 LDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRAT 180
Query: 65  INAVTFFPNGWAFATGSDDATCRLFD 90
           +  +     G    + S D T RL++
Sbjct: 181 VTDIAIIDRGRNVLSASLDGTIRLWE 206

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 20/170 (11%)
Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV---------- 68
           H   V +++++   R   +G      K+WDI       + PG++S ++ +          
Sbjct: 50  HGEVVCAVTISNPTRHVYTGG-KGCVKVWDI-------SHPGNKSPVSQLDCLNRDNYIR 101
Query: 69  --TFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD 126
                P+G     G + +T  ++D+ A          +      ++A S   ++  +   
Sbjct: 102 SCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS 161
Query: 127 DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           D N  VWD           GH +  SC+ ++ DG  + TG  D+ +R W+
Sbjct: 162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD 211

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP---NG 74
           GH+ +V  L+   D     SG  D   ++WD R    K T   H + + AV + P   N 
Sbjct: 215 GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNL 274
Query: 75  WAFATGSDDATCRLFDIRADQELAMYSHDNIICG--ITSVAFSRSGRLLLA--GYDDFNC 130
            A   G+ D     ++      +     + +  G  +TS+ +S   + +++  G+ D N 
Sbjct: 275 LATGGGTMDKQIHFWNAATGARV-----NTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNL 329
Query: 131 NVW---DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
           ++W    S  T++  I A HD RV    ++ DG  ++T + D  L+ W
Sbjct: 330 SIWSYSSSGLTKQVDIPA-HDTRVLYSALSPDGRILSTAASDENLKFW 376

>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 29/140 (20%)
Query: 38  GACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQE 96
           G      +L D++ GSC     GH  +I AV++ P   +  AT S D+  +L+D+R    
Sbjct: 162 GTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR---- 217
Query: 97  LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV 156
                              R+   L+   D  N     S   E A     H+ +V+ L  
Sbjct: 218 -------------------RASGCLIT-LDQHNGK--KSQAVESAN--TAHNGKVNGLCF 253
Query: 157 TEDGMAVATGSWDSFLRIWN 176
           T DG+ + T   D+ +R+WN
Sbjct: 254 TSDGLHLLTVGTDNRMRLWN 273

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 25/190 (13%)
Query: 6   DKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP------ 59
           D   L+     + H   + S++  P      +G+ D++  +W  ++ S  +TF       
Sbjct: 44  DDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW-AKEESADRTFEMDLLAI 102
Query: 60  --GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE-------LAMYSHDNIICGIT 110
             GHE+++  V +  +G+  AT S D +  +++     E       L  +S D     + 
Sbjct: 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQD-----VK 157
Query: 111 SVAFSRSGRLLLAGYDDFNCNVWDSMKT--ERAGILAGHDNRV--SCLGVTEDGMAVATG 166
            V +  S  LL +   D    +W       E   +L GH+  V  S    TE    + +G
Sbjct: 158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSG 217
Query: 167 SWDSFLRIWN 176
           S DS +R+W 
Sbjct: 218 SDDSTVRVWK 227

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 35  FVSGACDASAKLWDIRDGSCKQ---TFPGHESDINAVTFFP-NGWAFATGSDDATCRLFD 90
           F S A D    +WD R+ +  +   T   H +++N ++F P + +  ATGS D T  L+D
Sbjct: 247 FGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 306
Query: 91  IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMK 137
           +R + +L ++S ++    I  V +S     +LA    D   +VWD  K
Sbjct: 307 LR-NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 35  FVSGACDASAKLWDIRDGSCKQ---TFPGHESDINAVTFFP-NGWAFATGSDDATCRLFD 90
           F S A D    +WD R+ +  +   T   H +++N ++F P + +  ATGS D T  L+D
Sbjct: 249 FGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 308
Query: 91  IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMK 137
           +R + +L ++S ++    I  V +S     +LA    D   +VWD  K
Sbjct: 309 LR-NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 355

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 35  FVSGACDASAKLWDIRDGSCKQ---TFPGHESDINAVTFFP-NGWAFATGSDDATCRLFD 90
           F S A D    +WD R+ +  +   T   H +++N ++F P + +  ATGS D T  L+D
Sbjct: 251 FGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 310
Query: 91  IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMK 137
           +R + +L ++S ++    I  V +S     +LA    D   +VWD  K
Sbjct: 311 LR-NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 357

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 17  SGHTGDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQ---TFPGHESDINAVTFFP 72
           +GHT  V  +S      + F S A D    +WD R  +  +   +   H +++N ++F P
Sbjct: 224 TGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNP 283
Query: 73  -NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNC 130
            + +  ATGS D T  L+D+R + +L ++S ++    I  V +S     +LA    D   
Sbjct: 284 YSEFILATGSADKTVALWDLR-NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
Query: 131 NVWDSMK 137
           NVWD  K
Sbjct: 343 NVWDLSK 349

>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 35  FVSGACDASAKLWDIRDGSCKQT---FPGHESDINAVTFFP-NGWAFATGSDDATCRLFD 90
           F S A D    +WD R  +  +       H +++N ++F P + +  ATGS D T  L+D
Sbjct: 245 FGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 304
Query: 91  IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMK------------ 137
           +R + +L +++ ++    I  V +S     +LA    D   NVWD  K            
Sbjct: 305 LR-NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED 363
Query: 138 --TERAGILAGHDNRVSCLG-VTEDGMAVATGSWDSFLRIWN 176
              E   I  GH  ++S       +   + + S D+ ++IW 
Sbjct: 364 GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 405

>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 35  FVSGACDASAKLWDIRDGSCKQT---FPGHESDINAVTFFP-NGWAFATGSDDATCRLFD 90
           F S A D    +WD R  +  +       H +++N ++F P + +  ATGS D T  L+D
Sbjct: 245 FGSVADDQKLXIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 304
Query: 91  IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMK 137
           +R + +L +++ ++    I  V +S     +LA    D   NVWD  K
Sbjct: 305 LR-NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSK 351

>pdb|3MMY|A Chain A, Structural And Functional Analysis Of The Interaction Between The Nucleoporin Nup98 And The Mrna Export Factor Rae1 Length = 368

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF--P 72
           A   HTG V+ +  + D     + +CD +AK+WD+      Q    H++ +  + +   P
Sbjct: 81  AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAP 139
Query: 73  NGWAFATGSDDATCRLFDIRADQELAMYSHD------NIICGITSVAFSRSGRLLLAGYD 126
           N     TGS D T + +D R+   + +          ++I  +  VA +  G ++     
Sbjct: 140 NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQ--- 196
Query: 127 DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG 166
                  ++  +E   I +   ++  C+ + +D     TG
Sbjct: 197 ------LENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTG 230

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	176
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.98
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.98
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.98
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.98
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.97
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.97
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.97
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.97
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.97
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.97
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.97
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.97
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.97
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.97
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.97
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.97
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.97
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.97
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.97
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.97
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.97
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.97
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.97
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.97
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.97
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.97
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.97
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.97
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.97
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.97
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.97
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.96
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.96
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.96
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.96
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.96
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.96
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.96
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.96
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.96
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.96
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.96
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.96
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.96
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.96
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.96
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.96
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.96
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.96
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.96
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.96
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.96
3jro_A	753	Fusion protein of protein transport protein SEC13	99.96
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.96
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.96
3jro_A	753	Fusion protein of protein transport protein SEC13	99.96
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.95
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.95
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.95
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.95
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.95
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.95
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.95
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.95
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.95
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.95
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.95
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.95
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.95
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.95
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.95
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.95
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.95
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.95
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.95
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.94
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.94
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.94
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.94
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.94
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.94
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.94
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.94
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.94
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.94
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.94
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.94
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.93
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.93
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.93
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.92
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.92
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.92
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.92
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.91
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.91
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.9
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.89
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.89
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.88
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.88
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.87
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.86
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.82
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.79
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.78
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.77
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.76
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.75
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.75
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.74
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.74
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.73
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.72
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.72
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.72
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.72
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.72
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.72
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.71
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.71
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.71
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.7
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.69
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.69
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.68
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.67
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.67
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.67
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.67
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.66
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.65
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.64
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.64
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.62
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.61
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.6
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.6
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.59
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.58
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.58
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.58
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.57
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.55
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.52
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.51
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.5
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.49
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.48
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.48
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.46
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.44
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.44
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.43
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.4
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.4
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.38
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.36
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.35
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.35
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.35
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.33
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.3
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.29
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.27
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.25
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.24
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.24
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.22
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.22
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.22
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.2
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.18
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.16
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.14
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.12
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.11
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.11
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.11
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.09
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.06
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.04
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.03
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.03
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.99
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.98
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.97
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.96
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.93
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.9
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.89
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.89
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.77
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.74
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.7
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.67
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.67
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.65
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.58
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.58
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.57
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.56
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.56
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.51
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.48
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.47
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.46
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.44
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.43
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.4
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.38
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.36
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.33
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.31
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.28
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.26
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.24
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.18
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.18
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.17
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.17
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.16
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.16
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.15
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.15
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.13
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.12
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.99
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.98
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.96
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.87
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.83
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.83
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.81
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.8
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.79
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.77
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.74
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.71
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.69
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.69
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.67
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.64
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.6
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.57
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.56
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.56
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.54
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.52
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.44
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.41
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.41
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.4
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.4
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.37
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.36
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.28
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.25
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.23
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.21
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.2
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.04
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	96.96
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.95
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.9
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.89
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.88
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.85
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.77
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.77
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.72
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	96.55
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.46
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.42
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.37
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.31
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.28
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.27
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.27
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.2
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.13
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.08
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.07
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	95.87
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	95.86
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.85
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	95.54
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	95.47
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	95.45
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	95.17
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	95.17
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	94.79
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	94.53
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	94.5
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	94.38
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	94.34
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	94.17
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	93.36
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	92.88
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	92.41
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	92.31
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	91.79
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	91.12
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	90.42
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	90.34
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	89.86
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	88.48
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	87.27
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	85.91
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	85.34
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	84.99
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	83.34
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	82.71
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	82.36
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	81.02

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=6.9e-36  Score=224.36  Aligned_cols=162  Identities=85%  Similarity=1.433  Sum_probs=151.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|.+.|.+++|+|++.++++|+.|++|++||++++++..++.+|..+|++++|+|++..|++++.|++|++||+++.
T Consensus       179 ~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~  258 (340)
T 1got_B          179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD  258 (340)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +.+..+.+......+.+++|+|++.++++|+.|+.+++||..+.+....+.+|...|.+++|+|++.+|++|+.|++|+|
T Consensus       259 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~i  338 (340)
T 1got_B          259 QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI  338 (340)
T ss_dssp             EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred             cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEe
Confidence            77666655554457899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       339 Wd  340 (340)
T 1got_B          339 WN  340 (340)
T ss_dssp             EC
T ss_pred             cC
Confidence            97

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.4e-35  Score=222.35  Aligned_cols=161  Identities=20%  Similarity=0.215  Sum_probs=142.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +.||.+.|++++|+|++++|++|+.|++|++||+++++++.++.+|...|++++|+|++ ..|++++.|++|++||++++
T Consensus       123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~  202 (344)
T 4gqb_B          123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP  202 (344)
T ss_dssp             EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS
T ss_pred             ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc
Confidence            56899999999999999999999999999999999999999999999999999999987 57899999999999999988


Q ss_pred             CeeeEEeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC-CEEEEccCCCcE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSFL  172 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~~d~~v  172 (176)
                      +....+....+...+.++.|+|+ +.++++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++|+.|++|
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i  282 (344)
T 4gqb_B          203 KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSL  282 (344)
T ss_dssp             SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred             ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeE
Confidence            77665543333335788999995 5688999999999999999999999999999999999999997 579999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      +|||
T Consensus       283 ~vwd  286 (344)
T 4gqb_B          283 AVLD  286 (344)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            9997

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3.2e-34  Score=216.57  Aligned_cols=162  Identities=57%  Similarity=1.041  Sum_probs=148.8

Q ss_pred             ccCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|...|.+++|+|  ++.+|++|+.||+|++||++++++...+.+|...|++++|+|++..|++++.|++|++||++
T Consensus       191 ~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~  270 (354)
T 2pbi_B          191 SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLR  270 (354)
T ss_dssp             EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence            4678999999999987  46899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ....+..+........+.++.|+|++.++++|+.|++|++||+.+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v  350 (354)
T 2pbi_B          271 ADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTL  350 (354)
T ss_dssp             TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred             CCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCE
Confidence            87766555544434467899999999999999999999999998998888999999999999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++|+
T Consensus       351 ~vW~  354 (354)
T 2pbi_B          351 RVWA  354 (354)
T ss_dssp             EEEC
T ss_pred             EecC
Confidence            9997

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=4.3e-34  Score=211.57  Aligned_cols=160  Identities=19%  Similarity=0.362  Sum_probs=146.0

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|.+.|.+++|+|++.+|++|+.||+|++||+.+++.+..+..|..+|.+++|+|+++.+++++.|++|++||+.++
T Consensus         8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~   87 (304)
T 2ynn_A            8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG   87 (304)
T ss_dssp             EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred             eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence            47789999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeC-CCCEEEEccCCCcE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTE-DGMAVATGSWDSFL  172 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~tg~~d~~v  172 (176)
                      +.+..+.  .+...|.+++|+|++.++++|+.|+++++||+..+ .....+.+|...|.+++|+| ++..|++|+.|++|
T Consensus        88 ~~~~~~~--~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v  165 (304)
T 2ynn_A           88 EKVVDFE--AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV  165 (304)
T ss_dssp             CEEEEEE--CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred             cEEEEEe--CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence            7765543  23356899999999999999999999999998776 45567889999999999999 57899999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       166 ~iwd  169 (304)
T 2ynn_A          166 KVWS  169 (304)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9996

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.6e-33  Score=208.38  Aligned_cols=159  Identities=22%  Similarity=0.356  Sum_probs=147.2

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +.+|...|.+++|+|++++|++|+.||.|++||+++++++..+.+|..+|++++|+|++.+|++++.|++|++||++..+
T Consensus       160 ~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~  239 (321)
T 3ow8_A          160 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN  239 (321)
T ss_dssp             EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred             ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence            45688899999999999999999999999999999999999999999999999999999999999999999999998776


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ....+.  .+...|.+++|+|++.+|++++.|+++++||+.+++++..+.+|...|.+++|+|++.+|++++.|++|++|
T Consensus       240 ~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw  317 (321)
T 3ow8_A          240 LAGTLS--GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY  317 (321)
T ss_dssp             EEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred             eeEEEc--CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence            654432  333468899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       318 d  318 (321)
T 3ow8_A          318 D  318 (321)
T ss_dssp             E
T ss_pred             e
Confidence            7

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=4.6e-33  Score=206.04  Aligned_cols=161  Identities=25%  Similarity=0.421  Sum_probs=142.5

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-eeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|.+.|.+++|+|++.+|++|+.|++|++||++++ .....+.+|...|.+++|+| ++..|++++.|++|++||++
T Consensus        92 ~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~  171 (304)
T 2ynn_A           92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG  171 (304)
T ss_dssp             EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred             EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence            46789999999999999999999999999999999887 56678899999999999999 57899999999999999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECC--CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      .......... .+...+..+.|+|  ++.++++|+.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.|+
T Consensus       172 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg  250 (304)
T 2ynn_A          172 QSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG  250 (304)
T ss_dssp             CSSCSEEEEC-CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred             CCCccceecc-CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCC
Confidence            7655433322 1223577788876  678999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      +|++||
T Consensus       251 ~i~iWd  256 (304)
T 2ynn_A          251 TLKIWN  256 (304)
T ss_dssp             CEEEEE
T ss_pred             eEEEEE
Confidence            999996

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=4e-33  Score=214.34  Aligned_cols=160  Identities=25%  Similarity=0.428  Sum_probs=148.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||.++|++++|+|++.+|++|+.||+|++||+.+++...++++|..+|.+++|+|++..|++|+.|++|++||+.+.
T Consensus       103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~  182 (410)
T 1vyh_C          103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF  182 (410)
T ss_dssp             EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred             eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +.+..+  ..+...|.++.|+|++..+++|+.|++|++||+.++.++..+.+|...+.+++++|++.+|++|+.|++|++
T Consensus       183 ~~~~~~--~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~v  260 (410)
T 1vyh_C          183 ECIRTM--HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV  260 (410)
T ss_dssp             CEEECC--CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             ceeEEE--cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEE
Confidence            655433  223346899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       261 wd  262 (410)
T 1vyh_C          261 WV  262 (410)
T ss_dssp             EE
T ss_pred             EE
Confidence            96

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=3.2e-32  Score=202.88  Aligned_cols=159  Identities=23%  Similarity=0.374  Sum_probs=143.1

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|...|.+++|+|++.+|++|+.|++|++||++++++...+.+|..+|.+++|+|++..+++++.|++|++||++..
T Consensus        60 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~  139 (319)
T 3frx_A           60 SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ  139 (319)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC
T ss_pred             EEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999754


Q ss_pred             CeeeEEeecceEeceEEEEECCC------CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         95 QELAMYSHDNIICGITSVAFSRS------GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                       .+...  ..+...+.++.++|.      +..+++++.|+++++||+...+....+.+|...|.+++|+|++.+|++|+.
T Consensus       140 -~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~  216 (319)
T 3frx_A          140 -CLATL--LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK  216 (319)
T ss_dssp             -EEEEE--CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred             -eEEEE--eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC
Confidence             32222  222345788899885      448999999999999999998888899999999999999999999999999


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      |++|++||
T Consensus       217 dg~i~iwd  224 (319)
T 3frx_A          217 DGEIMLWN  224 (319)
T ss_dssp             TCEEEEEE
T ss_pred             CCeEEEEE
Confidence            99999996

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.1e-32  Score=208.49  Aligned_cols=162  Identities=22%  Similarity=0.244  Sum_probs=145.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~   93 (176)
                      ...+|.+.|++++|+|++++|++|+.|++|++||+++++++..+++|...|++++|+|++ ..+++++.|++|++||+++
T Consensus       134 ~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~  213 (357)
T 4g56_B          134 AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK  213 (357)
T ss_dssp             EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred             ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence            456899999999999999999999999999999999999999999999999999999987 4789999999999999998


Q ss_pred             CCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC-CEEEEccCCCc
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGSWDSF  171 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~~d~~  171 (176)
                      ++.............+.+++|+|++ .++++|+.|+.|++||+..++....+.+|...|.+++|+|++ .+|++|+.|++
T Consensus       214 ~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~  293 (357)
T 4g56_B          214 PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT  293 (357)
T ss_dssp             SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred             CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE
Confidence            7766554443334568899999984 688999999999999999999999999999999999999987 57999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      |+|||
T Consensus       294 i~iwd  298 (357)
T 4g56_B          294 VAVLD  298 (357)
T ss_dssp             EEEEC
T ss_pred             EEEEE
Confidence            99997

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.1e-32  Score=204.96  Aligned_cols=161  Identities=24%  Similarity=0.417  Sum_probs=142.3

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG--SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      ..||.+.|.+++|+|++.+|++|+.|+++++||.+++  ++...+.+|..+|.+++|+|++++|++++.|++|++||+++
T Consensus        57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~  136 (345)
T 3fm0_A           57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE  136 (345)
T ss_dssp             CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred             ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence            4689999999999999999999999999999999876  46788999999999999999999999999999999999987


Q ss_pred             CCeeeE-EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce--eeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         94 DQELAM-YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE--RAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        94 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      +..... .....+...|.++.|+|++.++++|+.|+++++||....+  ....+.+|...|.+++|+|++.+|++|+.|+
T Consensus       137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~  216 (345)
T 3fm0_A          137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR  216 (345)
T ss_dssp             TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence            654322 2233344568899999999999999999999999987664  4567889999999999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      +|++||
T Consensus       217 ~v~iW~  222 (345)
T 3fm0_A          217 TVRIWR  222 (345)
T ss_dssp             CEEEEE
T ss_pred             eEEEec
Confidence            999995

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=7.8e-32  Score=199.45  Aligned_cols=160  Identities=25%  Similarity=0.462  Sum_probs=148.3

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||.+.|.+++|+|++++|++|+.||.|++||..+++....+.+|..+|.+++|+|+++.|++++.|+.|++||++++
T Consensus        18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~   97 (312)
T 4ery_A           18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG   97 (312)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +.+..+.  .+...+.++.|+|++.++++|+.|+++++||+..++....+..|...+.+++|+|++.+|++|+.|+.|++
T Consensus        98 ~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  175 (312)
T 4ery_A           98 KCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI  175 (312)
T ss_dssp             CEEEEEE--CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             cEEEEEc--CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence            7665443  22346889999999999999999999999999999988999999999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       176 wd  177 (312)
T 4ery_A          176 WD  177 (312)
T ss_dssp             EE
T ss_pred             EE
Confidence            96

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.3e-32  Score=204.41  Aligned_cols=161  Identities=24%  Similarity=0.409  Sum_probs=141.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|...|.+++|+|++.++++|+.|++|++||++++++...+.+|..+|.+++|+|++.++++++.|++|++||+...
T Consensus        71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~  150 (343)
T 2xzm_R           71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE  150 (343)
T ss_dssp             EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC
T ss_pred             hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC
Confidence            36799999999999999999999999999999999999999999999999999999999999999999999999999743


Q ss_pred             CeeeEEeecceEeceEEEEECCCC----------cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSG----------RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      ..........+...+.++.|+|++          .++++++.|+++++|| ...+....+.+|...|.+++|+|++.+|+
T Consensus       151 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~  229 (343)
T 2xzm_R          151 CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIA  229 (343)
T ss_dssp             EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred             ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEE
Confidence            222211112333468899999987          7899999999999999 55667778889999999999999999999


Q ss_pred             EccCCCcEEEeC
Q psy15417        165 TGSWDSFLRIWN  176 (176)
Q Consensus       165 tg~~d~~v~vwd  176 (176)
                      +|+.|+.|++||
T Consensus       230 sgs~dg~v~iwd  241 (343)
T 2xzm_R          230 TGGKDKKLLIWD  241 (343)
T ss_dssp             EEETTCEEEEEE
T ss_pred             EEcCCCeEEEEE
Confidence            999999999996

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.1e-32  Score=204.20  Aligned_cols=160  Identities=23%  Similarity=0.359  Sum_probs=148.1

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||...|.+++|++++.++++++.|++|++||+++++++..+..|...+.+++|+|++++|++++.|+.+++|+++++
T Consensus        75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~  154 (321)
T 3ow8_A           75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG  154 (321)
T ss_dssp             EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC
T ss_pred             eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +........  ...+.+++|+|+++++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++
T Consensus       155 ~~~~~~~~~--~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~i  232 (321)
T 3ow8_A          155 KKEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKI  232 (321)
T ss_dssp             SEEEEEECS--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred             ceeEEecCC--CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEE
Confidence            765444322  235789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       233 wd  234 (321)
T 3ow8_A          233 YD  234 (321)
T ss_dssp             EE
T ss_pred             EE
Confidence            96

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.4e-32  Score=209.17  Aligned_cols=160  Identities=51%  Similarity=0.976  Sum_probs=142.2

Q ss_pred             CCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcC-CCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         17 SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIR-DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        17 ~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~-~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+|...|.+++|++ ++.+|++|+.|++|++||++ .++....+.+|...|++++|+|++.+|++++.|++|++||++++
T Consensus       202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~  281 (380)
T 3iz6_a          202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG  281 (380)
T ss_dssp             SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred             CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence            68999999999977 88999999999999999998 45778899999999999999999999999999999999999988


Q ss_pred             CeeeEEeecc-----eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee----cCCCccEEEEEEeCCCCEEEE
Q psy15417         95 QELAMYSHDN-----IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL----AGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        95 ~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      +.+..+....     ....+.+++|+|++.++++|+.|+.|++||...++....+    .+|.+.|.+++|+|++.+|++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s  361 (380)
T 3iz6_a          282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT  361 (380)
T ss_dssp             EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred             cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE
Confidence            7766554321     1123778999999999999999999999998887776655    679999999999999999999


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      |+.|++|++|+
T Consensus       362 gs~D~~i~iW~  372 (380)
T 3iz6_a          362 GSWDKNLKIWA  372 (380)
T ss_dssp             ECTTSCEEEEE
T ss_pred             eeCCCCEEEEe
Confidence            99999999996

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=8.1e-32  Score=207.03  Aligned_cols=160  Identities=27%  Similarity=0.444  Sum_probs=147.1

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|...|.+++|+|++.+|++|+.|++|++||+++++++.++.+|...|.++.++|++..+++++.|++|++||++++
T Consensus       187 ~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~  266 (410)
T 1vyh_C          187 TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK  266 (410)
T ss_dssp             CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred             EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CeeeEEeecceEeceEEEEECCC--------------------CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRS--------------------GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCL  154 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~  154 (176)
                      +....+.  .+...+.++.|+|+                    +.++++|+.|++|++||+.+++++..+.+|...|.++
T Consensus       267 ~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v  344 (410)
T 1vyh_C          267 ECKAELR--EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV  344 (410)
T ss_dssp             CEEEEEC--CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred             ceeeEec--CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEE
Confidence            6654432  23346889999996                    6689999999999999999999999999999999999


Q ss_pred             EEeCCCCEEEEccCCCcEEEeC
Q psy15417        155 GVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       155 ~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +|+|++.+|++|+.|++|++||
T Consensus       345 ~~~~~g~~l~s~s~D~~i~vwd  366 (410)
T 1vyh_C          345 LFHSGGKFILSCADDKTLRVWD  366 (410)
T ss_dssp             EECSSSSCEEEEETTTEEEEEC
T ss_pred             EEcCCCCEEEEEeCCCeEEEEE
Confidence            9999999999999999999997

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=6.7e-32  Score=199.19  Aligned_cols=162  Identities=20%  Similarity=0.317  Sum_probs=137.4

Q ss_pred             ccCCCccCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~i   88 (176)
                      .+.||.+.|.+++|+++  +.+|++|+.|++|++||+++++  ....+.+|..+|++++|+|+  +..|++++.|++|++
T Consensus        48 ~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~  127 (297)
T 2pm7_B           48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV  127 (297)
T ss_dssp             EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred             EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE
Confidence            57899999999999864  8899999999999999999874  56678889999999999997  889999999999999


Q ss_pred             eeCCCCCeeeEEeecceEeceEEEEECCC-------------CcEEEEEcCCCeEEEEeCCCce----eeeeecCCCccE
Q psy15417         89 FDIRADQELAMYSHDNIICGITSVAFSRS-------------GRLLLAGYDDFNCNVWDSMKTE----RAGILAGHDNRV  151 (176)
Q Consensus        89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~g~~d~~i~v~d~~~~~----~~~~~~~~~~~i  151 (176)
                      ||++............+...+.++.|+|+             +.+|++|+.|++|++||+...+    ....+.+|...|
T Consensus       128 wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V  207 (297)
T 2pm7_B          128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV  207 (297)
T ss_dssp             EEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred             EEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce
Confidence            99986542211222233346889999997             4689999999999999976654    556788999999


Q ss_pred             EEEEEeCCC---CEEEEccCCCcEEEeC
Q psy15417        152 SCLGVTEDG---MAVATGSWDSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~~---~~l~tg~~d~~v~vwd  176 (176)
                      .+++|+|++   .+|++|+.|++|++||
T Consensus       208 ~~v~~sp~~~~~~~las~s~D~~v~iWd  235 (297)
T 2pm7_B          208 RDVAWSPTVLLRSYMASVSQDRTCIIWT  235 (297)
T ss_dssp             EEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred             EEEEECCCCCCceEEEEEECCCcEEEEE
Confidence            999999984   8999999999999996

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.4e-31  Score=201.32  Aligned_cols=162  Identities=22%  Similarity=0.301  Sum_probs=139.6

Q ss_pred             ccCCCcc-CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--e-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTG-DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--Q-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~-~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      .+.+|.+ .|.+++|+|++++|++|+.|++|++||+.+++..  . ...+|...|++++|+|++++|++++.|+++++|+
T Consensus        10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~   89 (345)
T 3fm0_A           10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK   89 (345)
T ss_dssp             EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence            4678988 9999999999999999999999999999887633  2 2368999999999999999999999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc---eeeeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT---ERAGILAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      +..+..........+...|.+++|+|++.+|++|+.|+++++||+...   +....+.+|...|.+++|+|++.+|++|+
T Consensus        90 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s  169 (345)
T 3fm0_A           90 KNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS  169 (345)
T ss_dssp             ECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred             ccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence            876643333334444457899999999999999999999999998664   34566788999999999999999999999


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      .|++|++||
T Consensus       170 ~d~~i~~w~  178 (345)
T 3fm0_A          170 YDDTVKLYR  178 (345)
T ss_dssp             TTSCEEEEE
T ss_pred             CCCcEEEEE
Confidence            999999996

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-31  Score=199.21  Aligned_cols=159  Identities=21%  Similarity=0.405  Sum_probs=132.7

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-------CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-------GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      +|.+.|.+++|+|++.+|++|+.|++|++||++.       .++...+.+|..+|.+++|+|++++|++++.|++|++||
T Consensus        56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd  135 (330)
T 2hes_X           56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE  135 (330)
T ss_dssp             CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence            4999999999999999999999999999999853       356778899999999999999999999999999999999


Q ss_pred             CCCC-Cee-eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc--eeeeeecCCCccEEEEEEeCC--CCEEE
Q psy15417         91 IRAD-QEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT--ERAGILAGHDNRVSCLGVTED--GMAVA  164 (176)
Q Consensus        91 ~~~~-~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~  164 (176)
                      ++.. +.. .......+...|.++.|+|++.+|++|+.|++|++||....  +++..+.+|...|.+++|+|+  +..|+
T Consensus       136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~  215 (330)
T 2hes_X          136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC  215 (330)
T ss_dssp             CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred             ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence            9532 221 11223334457899999999999999999999999997655  577788899999999999998  67899


Q ss_pred             EccCCCcEEEeC
Q psy15417        165 TGSWDSFLRIWN  176 (176)
Q Consensus       165 tg~~d~~v~vwd  176 (176)
                      +|+.|++|++||
T Consensus       216 s~s~D~~v~iw~  227 (330)
T 2hes_X          216 SGSDDSTVRVWK  227 (330)
T ss_dssp             EEETTSCEEEEE
T ss_pred             EEeCCCeEEEEE
Confidence            999999999996

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.7e-31  Score=197.06  Aligned_cols=162  Identities=18%  Similarity=0.252  Sum_probs=137.3

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--CeeeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD--GSCKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~--~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd   90 (176)
                      .+.+|.+.|.+++|+|++++|++|+.|++|++||+..  .+++.++.+|.++|.+++|+|+  +..|++++.|++|++||
T Consensus         4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd   83 (297)
T 2pm7_B            4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK   83 (297)
T ss_dssp             ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred             eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence            4678999999999999999999999999999999974  3678899999999999999763  88999999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCce--eeeeecCCCccEEEEEEeCC-------
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTE--RAGILAGHDNRVSCLGVTED-------  159 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~-------  159 (176)
                      +++++.........+...|.+++|+|+  +.++++++.|+++++||+....  ....+.+|...|.+++|+|+       
T Consensus        84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~  163 (297)
T 2pm7_B           84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE  163 (297)
T ss_dssp             BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred             cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence            987642222222223346889999998  8899999999999999987653  23456789999999999996       


Q ss_pred             ------CCEEEEccCCCcEEEeC
Q psy15417        160 ------GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       160 ------~~~l~tg~~d~~v~vwd  176 (176)
                            +.+|++|+.|++|++||
T Consensus       164 ~~~~~~~~~l~sgs~D~~v~lwd  186 (297)
T 2pm7_B          164 HNGTKESRKFVTGGADNLVKIWK  186 (297)
T ss_dssp             ------CCEEEEEETTSCEEEEE
T ss_pred             CCCCCCcceEEEEcCCCcEEEEE
Confidence                  46899999999999996

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=4.9e-31  Score=197.91  Aligned_cols=161  Identities=18%  Similarity=0.388  Sum_probs=144.1

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||.+.|.+++|+|++++|++|+.||+|++||..+++....++.|...|.+++|+|++.++++++.|+.+++|++.+.
T Consensus        50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~  129 (340)
T 1got_B           50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR  129 (340)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred             eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999765


Q ss_pred             Cee--eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         95 QEL--AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        95 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      +..  .......+...+.++.|++++. +++++.|+++++||+.+++....+.+|...|.+++|+|++.++++|+.|++|
T Consensus       130 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v  208 (340)
T 1got_B          130 EGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASA  208 (340)
T ss_dssp             SBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             CCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence            421  1122333345688899988875 7889999999999999999999999999999999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       209 ~~wd  212 (340)
T 1got_B          209 KLWD  212 (340)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9996

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=5.1e-31  Score=211.69  Aligned_cols=162  Identities=18%  Similarity=0.363  Sum_probs=143.6

Q ss_pred             ccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.||.+.|++++|+|++. .|++|+.|++|++||.+++++..++.+|...|++++|+|++++|++++.|++|++||+++
T Consensus       142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~  221 (611)
T 1nr0_A          142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD  221 (611)
T ss_dssp             CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence            4679999999999999986 699999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCeeeEEeec-----ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee--------------------------
Q psy15417         94 DQELAMYSHD-----NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG--------------------------  142 (176)
Q Consensus        94 ~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~--------------------------  142 (176)
                      ++....+...     .+...|.+++|+|++.+|++++.|+++++||+.+++...                          
T Consensus       222 g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s  301 (611)
T 1nr0_A          222 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS  301 (611)
T ss_dssp             CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE
T ss_pred             CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEe
Confidence            7766554211     234578999999999999999999999999987665432                          


Q ss_pred             -----------------eecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        143 -----------------ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       143 -----------------~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                                       .+.+|...|.+++|+|++.+|++++.|++|++||
T Consensus       302 ~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd  352 (611)
T 1nr0_A          302 ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD  352 (611)
T ss_dssp             TTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence                             3357889999999999999999999999999996

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.4e-30  Score=196.66  Aligned_cols=159  Identities=23%  Similarity=0.384  Sum_probs=137.3

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE--------------------------------------
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT--------------------------------------   57 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~--------------------------------------   57 (176)
                      +.||.+.|++++|+|++.+|++|+.||+|++||..+++....                                      
T Consensus        60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~  139 (354)
T 2pbi_B           60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDK  139 (354)
T ss_dssp             EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred             ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence            679999999999999999999999999999999877654333                                      


Q ss_pred             ----------ecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC--CCcEEEEEc
Q psy15417         58 ----------FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR--SGRLLLAGY  125 (176)
Q Consensus        58 ----------~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~  125 (176)
                                +.+|...|.+++|+|++..+++++.|++|++||+++++.+..+.  .+...+.++.++|  ++.++++|+
T Consensus       140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~g~~l~sgs  217 (354)
T 2pbi_B          140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH--GHGADVLCLDLAPSETGNTFVSGG  217 (354)
T ss_dssp             TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECCCSSCCEEEEEE
T ss_pred             cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc--CCCCCeEEEEEEeCCCCCEEEEEe
Confidence                      33467778888888888889999999999999998877665443  2224678888887  468999999


Q ss_pred             CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       126 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .|+++++||+.++++...+.+|...|.+++|+|++.+|++|+.|++|++||
T Consensus       218 ~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd  268 (354)
T 2pbi_B          218 CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYD  268 (354)
T ss_dssp             TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999999999999999999999999999999999999996

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-30  Score=193.96  Aligned_cols=160  Identities=19%  Similarity=0.286  Sum_probs=132.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--eeeeEe-cC-CCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG--SCKQTF-PG-HESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~--~~~~~~-~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      .+.+|.+.|.+++|+|+  +|++|+.|++|++||++++  +....+ .+ |..+|++++|+|++.+|++++.|++|++||
T Consensus         9 ~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~   86 (330)
T 2hes_X            9 SLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWA   86 (330)
T ss_dssp             EEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            46789999999999987  9999999999999999875  455556 44 999999999999999999999999999999


Q ss_pred             CCCCC-----eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC----ceeeeeecCCCccEEEEEEeCCCC
Q psy15417         91 IRADQ-----ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK----TERAGILAGHDNRVSCLGVTEDGM  161 (176)
Q Consensus        91 ~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~----~~~~~~~~~~~~~i~~~~~~~~~~  161 (176)
                      ++...     .........+...|.+++|+|++.+|++|+.|+++++||+..    .+++..+.+|...|.+++|+|++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~  166 (330)
T 2hes_X           87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA  166 (330)
T ss_dssp             C-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS
T ss_pred             cccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC
Confidence            85321     111122334456799999999999999999999999999842    255677889999999999999999


Q ss_pred             EEEEccCCCcEEEeC
Q psy15417        162 AVATGSWDSFLRIWN  176 (176)
Q Consensus       162 ~l~tg~~d~~v~vwd  176 (176)
                      +|++|+.|++|++||
T Consensus       167 ~l~s~s~D~~i~iW~  181 (330)
T 2hes_X          167 LLASSSYDDTVRIWK  181 (330)
T ss_dssp             EEEEEETTSCEEEEE
T ss_pred             EEEEEcCCCeEEEEE
Confidence            999999999999996

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=3.6e-31  Score=201.45  Aligned_cols=162  Identities=22%  Similarity=0.446  Sum_probs=135.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC-
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~-   93 (176)
                      .+.||.+.|++++|+|++.+|++|+.||+|++||+.+++....++.|...|.+++|+|+++.+++++.|+.+++||+.+ 
T Consensus        61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~  140 (380)
T 3iz6_a           61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQ  140 (380)
T ss_dssp             EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCC
T ss_pred             cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCC
Confidence            4789999999999999999999999999999999999999999999998899999998888877777777777777532 


Q ss_pred             -------------------------------------------------CCeeeEEee---cceEeceEEEEECC-CCcE
Q psy15417         94 -------------------------------------------------DQELAMYSH---DNIICGITSVAFSR-SGRL  120 (176)
Q Consensus        94 -------------------------------------------------~~~~~~~~~---~~~~~~v~~~~~~~-~~~~  120 (176)
                                                                       ++.+..+..   ..+...+.++.++| ++.+
T Consensus       141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~  220 (380)
T 3iz6_a          141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANM  220 (380)
T ss_dssp             SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCE
T ss_pred             ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCE
Confidence                                                             211111110   11223577888877 7889


Q ss_pred             EEEEcCCCeEEEEeCC-CceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        121 LLAGYDDFNCNVWDSM-KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       121 l~~g~~d~~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++|+.|+++++||+. ..+....+.+|...|.+++|+|++.+|++|+.|++|++||
T Consensus       221 l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd  277 (380)
T 3iz6_a          221 FISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFD  277 (380)
T ss_dssp             EEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred             EEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence            9999999999999987 4567778889999999999999999999999999999996

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.98  E-value=2.1e-30  Score=198.00  Aligned_cols=155  Identities=34%  Similarity=0.557  Sum_probs=139.8

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      +...|.+++|+|++++|++|+.|++|++||+++++....+.+|...|.+++|+|++..|++++.|++|++||+++++...
T Consensus       122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~  201 (393)
T 1erj_A          122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSL  201 (393)
T ss_dssp             CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred             CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEE
Confidence            33459999999999999999999999999999999999999999999999999999999999999999999999877655


Q ss_pred             EEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeee-------cCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         99 MYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGIL-------AGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      .....   ..+.+++|+| ++.++++|+.|+++++||..+++....+       .+|...|.+++|+|++.+|++|+.|+
T Consensus       202 ~~~~~---~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~  278 (393)
T 1erj_A          202 TLSIE---DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR  278 (393)
T ss_dssp             EEECS---SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEEcC---CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence            54443   3577899999 8999999999999999999887766555       57889999999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      +|++||
T Consensus       279 ~v~~wd  284 (393)
T 1erj_A          279 SVKLWN  284 (393)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            999996

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.98  E-value=6.6e-31  Score=198.06  Aligned_cols=169  Identities=19%  Similarity=0.204  Sum_probs=137.9

Q ss_pred             ccccccccCCCcccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccC-CcEEE
Q psy15417          3 DHLDKSALLGSPAASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPN-GWAFA   78 (176)
Q Consensus         3 ~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~-~~~l~   78 (176)
                      |++++...+.  .+.+|.+.|.+++|++++. +|++|+.|++|++||+++++....+.  .|...+++++|+|+ +++|+
T Consensus       154 wd~~~~~~~~--~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~  231 (344)
T 4gqb_B          154 WDLAQQVVLS--SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV  231 (344)
T ss_dssp             EETTTTEEEE--EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred             EECCCCcEEE--EEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceE
Confidence            3444443332  4678999999999999875 78999999999999999998877764  35567999999995 67899


Q ss_pred             EeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417         79 TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT  157 (176)
Q Consensus        79 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~  157 (176)
                      +|+.|++|++||+++++.+..+.  .+...|.+++|+|++ .+|++|+.|++|++||+..++.. ...+|.+.|.+++|+
T Consensus       232 sg~~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~s  308 (344)
T 4gqb_B          232 FGDENGTVSLVDTKSTSCVLSSA--VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWS  308 (344)
T ss_dssp             EEETTSEEEEEESCC--CCEEEE--CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEEC
T ss_pred             EeccCCcEEEEECCCCcEEEEEc--CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEe
Confidence            99999999999999887765543  233468899999998 57899999999999998877654 567899999999999


Q ss_pred             CCCC-EEEEccCCCcEEEeC
Q psy15417        158 EDGM-AVATGSWDSFLRIWN  176 (176)
Q Consensus       158 ~~~~-~l~tg~~d~~v~vwd  176 (176)
                      |++. +|++||.|++|++|+
T Consensus       309 p~~~~llas~s~D~~v~~w~  328 (344)
T 4gqb_B          309 PLNHSLLTTVGWDHQVVHHV  328 (344)
T ss_dssp             SSSTTEEEEEETTSCEEEEE
T ss_pred             CCCCeEEEEEcCCCeEEEEE
Confidence            9875 678999999999995

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.98  E-value=2.5e-30  Score=194.22  Aligned_cols=160  Identities=23%  Similarity=0.384  Sum_probs=137.8

Q ss_pred             ccCCCccCeEEEEE-----cC-CCCEEEEEeCCCeEEEEEcCCC-------eeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417         15 AASGHTGDVMSLSL-----AP-DMRTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPNGWAFATGS   81 (176)
Q Consensus        15 ~~~gh~~~V~~~~~-----~~-~~~~l~s~s~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s   81 (176)
                      .+.||.+.|++++|     ++ ++.+|++|+.|++|++||+.+.       .....+.+|..+|++++|+|++.++++++
T Consensus        16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s   95 (343)
T 2xzm_R           16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS   95 (343)
T ss_dssp             EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred             eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc
Confidence            57899999999999     76 8999999999999999999753       45678899999999999999999999999


Q ss_pred             CCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee--ecCCCccEEEEEEeCC
Q psy15417         82 DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI--LAGHDNRVSCLGVTED  159 (176)
Q Consensus        82 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~  159 (176)
                      .|++|++||+++++.+..+.  .+...|.+++|+|++..+++++.|++|++||+........  ...|...+.+++|+|+
T Consensus        96 ~D~~v~lwd~~~~~~~~~~~--~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~  173 (343)
T 2xzm_R           96 WDKTLRLWDLRTGTTYKRFV--GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPI  173 (343)
T ss_dssp             TTSEEEEEETTSSCEEEEEE--CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred             CCCcEEEEECCCCcEEEEEc--CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence            99999999999887665443  2335789999999999999999999999999864332221  2368889999999998


Q ss_pred             C----------CEEEEccCCCcEEEeC
Q psy15417        160 G----------MAVATGSWDSFLRIWN  176 (176)
Q Consensus       160 ~----------~~l~tg~~d~~v~vwd  176 (176)
                      +          .+|++|+.|++|++||
T Consensus       174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd  200 (343)
T 2xzm_R          174 MKSANKVQPFAPYFASVGWDGRLKVWN  200 (343)
T ss_dssp             CCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred             cccccccCCCCCEEEEEcCCCEEEEEc
Confidence            6          7899999999999996

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.98  E-value=1.5e-31  Score=198.94  Aligned_cols=162  Identities=17%  Similarity=0.238  Sum_probs=132.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEcc--CCcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFP--NGWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~d~~i~iwd   90 (176)
                      .+.+|.+.|++++|+|++++|++|+.|++|++||+++++  +..++++|..+|.+++|+|  ++..|++++.|++|++||
T Consensus         8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd   87 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR   87 (316)
T ss_dssp             ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred             ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence            467899999999999999999999999999999998875  5678999999999999975  488999999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCce---eeeeecCCCccEEEEEEeCC------
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTE---RAGILAGHDNRVSCLGVTED------  159 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~---~~~~~~~~~~~i~~~~~~~~------  159 (176)
                      +++++.........+...|.+++|+|+  +.++++|+.|+++++||+....   ....+.+|...+.+++|+|+      
T Consensus        88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~  167 (316)
T 3bg1_A           88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL  167 (316)
T ss_dssp             CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred             CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence            987643223333334457889999998  7899999999999999987642   23456788889999999987      


Q ss_pred             -----------CCEEEEccCCCcEEEeC
Q psy15417        160 -----------GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       160 -----------~~~l~tg~~d~~v~vwd  176 (176)
                                 +.+|++|+.|++|++||
T Consensus       168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd  195 (316)
T 3bg1_A          168 IDHPSGQKPNYIKRFASGGCDNLIKLWK  195 (316)
T ss_dssp             ---CCSCCCCCCCBEECCBTTSBCCEEE
T ss_pred             cccccccCccccceEEEecCCCeEEEEE
Confidence                       36899999999999996

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.97  E-value=3.7e-30  Score=191.67  Aligned_cols=159  Identities=23%  Similarity=0.406  Sum_probs=139.9

Q ss_pred             ccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCC-----CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRD-----GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i   88 (176)
                      .+.||.+.|.+++|+|++ .+|++|+.|++|++||+..     +..+..+++|...|.+++|+|++.++++++.|++|++
T Consensus        12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~   91 (319)
T 3frx_A           12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL   91 (319)
T ss_dssp             EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence            578999999999999965 8999999999999999864     3456789999999999999999999999999999999


Q ss_pred             eeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC------CCE
Q psy15417         89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED------GMA  162 (176)
Q Consensus        89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~------~~~  162 (176)
                      ||+++++.+..+.  .+...|.+++|+|++.++++|+.|++|++||+. ++.+..+.+|...+.++++.|.      +..
T Consensus        92 wd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~  168 (319)
T 3frx_A           92 WDVATGETYQRFV--GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVT  168 (319)
T ss_dssp             EETTTTEEEEEEE--CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred             EECCCCCeeEEEc--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence            9999887655443  333578999999999999999999999999974 5677788899999999999985      448


Q ss_pred             EEEccCCCcEEEeC
Q psy15417        163 VATGSWDSFLRIWN  176 (176)
Q Consensus       163 l~tg~~d~~v~vwd  176 (176)
                      |++|+.|+.|++||
T Consensus       169 l~s~~~d~~i~~wd  182 (319)
T 3frx_A          169 IISAGNDKMVKAWN  182 (319)
T ss_dssp             EEEEETTSCEEEEE
T ss_pred             EEEEeCCCEEEEEE
Confidence            99999999999996

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.97  E-value=9.1e-30  Score=188.32  Aligned_cols=159  Identities=25%  Similarity=0.494  Sum_probs=143.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +.+|...|.+++|+|++.+|++|+.|+.|++||+++++++..+.+|...|.+++|+|++.++++++.|+.|++||+++++
T Consensus        61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~  140 (312)
T 4ery_A           61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK  140 (312)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred             hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-CCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-GHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      .+..+.  .+..++.++.|+|++.++++++.|+.+++||+.+++.+..+. .+...+..++|+|++.+|++++.|+.|++
T Consensus       141 ~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i  218 (312)
T 4ery_A          141 CLKTLP--AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL  218 (312)
T ss_dssp             EEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred             EEEEec--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence            655443  223468899999999999999999999999998887766554 45667999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       219 wd  220 (312)
T 4ery_A          219 WD  220 (312)
T ss_dssp             EE
T ss_pred             EE
Confidence            96

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.97  E-value=5.3e-30  Score=194.33  Aligned_cols=158  Identities=15%  Similarity=0.138  Sum_probs=128.6

Q ss_pred             CCCccCeEEEEEcCCCCEEEE--EeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVS--GACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s--~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ..++..+.+++|+|||+++++  ++.|++|++||+++++++..+. |...|.+++|+|+++++++++.++ +.+|+..++
T Consensus       130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~  207 (365)
T 4h5i_A          130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTG  207 (365)
T ss_dssp             CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTC
T ss_pred             CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccC
Confidence            346677999999999998765  4478999999999999988886 778899999999999999998665 555554332


Q ss_pred             Ceee--------------EEee------------------------------------cceEeceEEEEECCCCcEEEEE
Q psy15417         95 QELA--------------MYSH------------------------------------DNIICGITSVAFSRSGRLLLAG  124 (176)
Q Consensus        95 ~~~~--------------~~~~------------------------------------~~~~~~v~~~~~~~~~~~l~~g  124 (176)
                      +...              .+..                                    ..+...|.+++|+|++++|++|
T Consensus       208 ~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg  287 (365)
T 4h5i_A          208 SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA  287 (365)
T ss_dssp             CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred             cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence            2110              0000                                    0011247899999999999999


Q ss_pred             cCCCeEEEEeCCCceeeeee-cCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        125 YDDFNCNVWDSMKTERAGIL-AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       125 ~~d~~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.|++|+|||+.+++++..+ .+|...|.+++|+|++.+||+||.|++|||||
T Consensus       288 s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~  340 (365)
T 4h5i_A          288 SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIK  340 (365)
T ss_dssp             ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred             cCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999988875 68999999999999999999999999999996

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.97  E-value=3.2e-30  Score=207.10  Aligned_cols=160  Identities=23%  Similarity=0.373  Sum_probs=131.8

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe--eeeE-----------------------------------
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQT-----------------------------------   57 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--~~~~-----------------------------------   57 (176)
                      .+.||.+.|++++|+|++++|++|+.|++|++||+.+++  ...+                                   
T Consensus        54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~  133 (611)
T 1nr0_A           54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL  133 (611)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred             EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence            467999999999999999999999999999999986432  2222                                   


Q ss_pred             ---------ecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC
Q psy15417         58 ---------FPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD  127 (176)
Q Consensus        58 ---------~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d  127 (176)
                               +.+|...|++++|+|++. .|++++.|++|++||.+..+....+  ..+...|.+++|+|++.++++|+.|
T Consensus       134 wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l--~~H~~~V~~v~fspdg~~las~s~D  211 (611)
T 1nr0_A          134 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF--GEHTKFVHSVRYNPDGSLFASTGGD  211 (611)
T ss_dssp             TTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE--CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             eeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee--ccccCceEEEEECCCCCEEEEEECC
Confidence                     345666667777777664 5888888888899987665443332  3334568999999999999999999


Q ss_pred             CeEEEEeCCCceeeeeec-------CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        128 FNCNVWDSMKTERAGILA-------GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       128 ~~i~v~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++|++||...++....+.       +|...|.+++|+|++.+|++|+.|++|++||
T Consensus       212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd  267 (611)
T 1nr0_A          212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN  267 (611)
T ss_dssp             SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence            999999998888777663       7999999999999999999999999999996

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.97  E-value=2.6e-30  Score=210.06  Aligned_cols=162  Identities=25%  Similarity=0.427  Sum_probs=145.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||...|.+++|+|++++|++|+.||+|++||+.++++...+.+|...|.+++|+|++..|++++.|++|++||....
T Consensus       425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~  504 (694)
T 3dm0_A          425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE  504 (694)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred             eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC
Confidence            36799999999999999999999999999999999999999999999999999999999999999999999999998654


Q ss_pred             CeeeEEe-ecceEeceEEEEECCCC--cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         95 QELAMYS-HDNIICGITSVAFSRSG--RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        95 ~~~~~~~-~~~~~~~v~~~~~~~~~--~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      ....... ...+...|.++.|+|++  ..+++|+.|++|++||+...+....+.+|...|.+++|+|++.+|++|+.|++
T Consensus       505 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~  584 (694)
T 3dm0_A          505 CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV  584 (694)
T ss_dssp             EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred             cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence            3322211 12333468899999986  58999999999999999998888899999999999999999999999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      |++||
T Consensus       585 i~iwd  589 (694)
T 3dm0_A          585 VLLWD  589 (694)
T ss_dssp             CEEEE
T ss_pred             EEEEE
Confidence            99996

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.97  E-value=6.7e-30  Score=202.66  Aligned_cols=157  Identities=31%  Similarity=0.563  Sum_probs=141.3

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|...|.+++|+|++++|++++.|++|++||. +++....+.+|..+|++++|+|++++|++++.|++|++||. ++
T Consensus       421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~  498 (577)
T 2ymu_A          421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NG  498 (577)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TS
T ss_pred             EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CC
Confidence            35789999999999999999999999999999996 56778899999999999999999999999999999999995 44


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +.+..+.  .+...|++++|+|++++|++++.|+.|++||. .++++..+.+|...|.+++|+|++.+|+|++.|++|++
T Consensus       499 ~~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~  575 (577)
T 2ymu_A          499 QLLQTLT--GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKL  575 (577)
T ss_dssp             CEEEEEE--CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred             CEEEEEe--CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEE
Confidence            4444332  33357899999999999999999999999994 67888899999999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       576 Wd  577 (577)
T 2ymu_A          576 WN  577 (577)
T ss_dssp             EC
T ss_pred             eC
Confidence            98

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.97  E-value=1.4e-29  Score=187.73  Aligned_cols=162  Identities=23%  Similarity=0.304  Sum_probs=137.8

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC----eeeeEecCCCCCeeEEEEcc--CCcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG----SCKQTFPGHESDINAVTFFP--NGWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~~--~~~~l~s~s~d~~i~i   88 (176)
                      .+.||.+.|++++|+|++.+|++|+.||.|++||+.++    +....+.+|..+|.+++|+|  ++.+|++++.|+.|++
T Consensus         6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v   85 (351)
T 3f3f_A            6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL   85 (351)
T ss_dssp             EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred             cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence            46799999999999999999999999999999999876    46778889999999999999  5999999999999999


Q ss_pred             eeCCCCCe-------eeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCce--------------------
Q psy15417         89 FDIRADQE-------LAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTE--------------------  139 (176)
Q Consensus        89 wd~~~~~~-------~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~--------------------  139 (176)
                      ||++.++.       ........+...+.++.|+|+  +.++++++.|+.+++||+...+                    
T Consensus        86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  165 (351)
T 3f3f_A           86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN  165 (351)
T ss_dssp             EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred             EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence            99987532       112223333457899999999  9999999999999999975432                    


Q ss_pred             ----------------------------------------eeeeecCCCccEEEEEEeCCC----CEEEEccCCCcEEEe
Q psy15417        140 ----------------------------------------RAGILAGHDNRVSCLGVTEDG----MAVATGSWDSFLRIW  175 (176)
Q Consensus       140 ----------------------------------------~~~~~~~~~~~i~~~~~~~~~----~~l~tg~~d~~v~vw  175 (176)
                                                              ....+.+|...|.+++|+|++    .+|++|+.|+.|++|
T Consensus       166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw  245 (351)
T 3f3f_A          166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF  245 (351)
T ss_dssp             CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred             cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence                                                    133455788899999999998    899999999999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       246 d  246 (351)
T 3f3f_A          246 K  246 (351)
T ss_dssp             E
T ss_pred             e
Confidence            6

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.1e-29  Score=188.75  Aligned_cols=167  Identities=20%  Similarity=0.233  Sum_probs=145.8

Q ss_pred             cCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         10 LLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        10 ~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      .+....+.||.+.|.+++|+|++.+|++|+.||.|++||+.+++....+.+|..+|.+++|+|++++|++++.|+.|++|
T Consensus        22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw  101 (369)
T 3zwl_B           22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW  101 (369)
T ss_dssp             SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred             ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence            33444578999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCeeeEEeecceE---------------------------------------------------------eceEEE
Q psy15417         90 DIRADQELAMYSHDNII---------------------------------------------------------CGITSV  112 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~---------------------------------------------------------~~v~~~  112 (176)
                      |+++++.+..+......                                                         ..+.++
T Consensus       102 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (369)
T 3zwl_B          102 DVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA  181 (369)
T ss_dssp             ETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred             ECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence            99876544332211000                                                         057788


Q ss_pred             EECCCCcEEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        113 AFSRSGRLLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       113 ~~~~~~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +|+|++..+++++.++.+++||+.. .+....+..|...|.+++|+|++.+|++++.|+.|++||
T Consensus       182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d  246 (369)
T 3zwl_B          182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVD  246 (369)
T ss_dssp             EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEE
Confidence            8999999999999999999999888 678888888999999999999999999999999999996

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.97  E-value=9.9e-30  Score=187.55  Aligned_cols=175  Identities=19%  Similarity=0.375  Sum_probs=141.4

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec----------------------
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP----------------------   59 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~----------------------   59 (176)
                      +|+.+++..+....+.+|...|.+++|+|++++|++|+.||+|++||+++++++..+.                      
T Consensus        49 iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~  128 (318)
T 4ggc_A           49 LWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRS  128 (318)
T ss_dssp             EEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETT
T ss_pred             EEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecC
Confidence            3566666666665677899999999999999999999999999999999887655443                      


Q ss_pred             -------------------CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee----EE-eec------------
Q psy15417         60 -------------------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA----MY-SHD------------  103 (176)
Q Consensus        60 -------------------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~----~~-~~~------------  103 (176)
                                         +|...+..+.+.++++++++++.|++|++||+++++...    .. ...            
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  208 (318)
T 4ggc_A          129 GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ  208 (318)
T ss_dssp             SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTS
T ss_pred             CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCC
Confidence                               456667788888999999999999999999987543110    00 000            


Q ss_pred             -----------------------------ceEeceEEEEECCCCcEEEEE--cCCCeEEEEeCCCceeeeeecCCCccEE
Q psy15417        104 -----------------------------NIICGITSVAFSRSGRLLLAG--YDDFNCNVWDSMKTERAGILAGHDNRVS  152 (176)
Q Consensus       104 -----------------------------~~~~~v~~~~~~~~~~~l~~g--~~d~~i~v~d~~~~~~~~~~~~~~~~i~  152 (176)
                                                   .....+..+.|+|++..++++  +.|+.|++||+.+++++..+.+|.+.|.
T Consensus       209 ~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~  288 (318)
T 4ggc_A          209 SNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL  288 (318)
T ss_dssp             TTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred             CcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence                                         000135677888888876654  4899999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        153 CLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++|+|++.+|+|||.|++|+|||
T Consensus       289 ~l~~spdg~~l~S~s~D~~v~iWd  312 (318)
T 4ggc_A          289 SLTMSPDGATVASAAADETLRLWR  312 (318)
T ss_dssp             EEEECTTSSCEEEEETTTEEEEEC
T ss_pred             EEEEcCCCCEEEEEecCCeEEEEE
Confidence            999999999999999999999997

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.97  E-value=4.3e-30  Score=194.25  Aligned_cols=159  Identities=21%  Similarity=0.278  Sum_probs=136.9

Q ss_pred             ccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEe--cCCCCCeeEEEEccC-CcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTF--PGHESDINAVTFFPN-GWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd   90 (176)
                      .+.+|...|++++|++++. ++++++.||+|++||+++++....+  ..|...+.+++|+|+ +.+|++++.|+.|++||
T Consensus       176 ~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd  255 (357)
T 4g56_B          176 SYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVN  255 (357)
T ss_dssp             EECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEE
T ss_pred             EEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEE
Confidence            4678999999999999875 8899999999999999998766554  446788999999997 57899999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC-CCCEEEEccC
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-DGMAVATGSW  168 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~tg~~  168 (176)
                      +++++.+..+..  +...|.+++|+|++ .+|++|+.|++|+|||+..++.+..+ +|.+.|.+++|+| ++.+|++|+.
T Consensus       256 ~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~  332 (357)
T 4g56_B          256 IKNPDSAQTSAV--HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGW  332 (357)
T ss_dssp             SSCGGGCEEECC--CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEET
T ss_pred             CCCCcEeEEEec--cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcC
Confidence            998877655432  23468899999987 57899999999999999888776554 7999999999998 7899999999


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      |++|++||
T Consensus       333 Dg~v~iW~  340 (357)
T 4g56_B          333 DHKVLHHH  340 (357)
T ss_dssp             TSCEEEEE
T ss_pred             CCeEEEEE
Confidence            99999996

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.97  E-value=1.4e-29  Score=193.47  Aligned_cols=161  Identities=26%  Similarity=0.458  Sum_probs=138.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.+|...|.+++|+|++.+|++|+.|++|++||++++++...+. +...+.+++|+| ++.++++++.|+.|++||+++
T Consensus       160 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~  238 (393)
T 1erj_A          160 ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET  238 (393)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT
T ss_pred             EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence            367899999999999999999999999999999999999888776 556799999999 899999999999999999988


Q ss_pred             CCeeeEEee-----cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc------------eeeeeecCCCccEEEEEE
Q psy15417         94 DQELAMYSH-----DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT------------ERAGILAGHDNRVSCLGV  156 (176)
Q Consensus        94 ~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~------------~~~~~~~~~~~~i~~~~~  156 (176)
                      +..+.....     ..+...|.+++|+|++.++++|+.|+++++||+...            .+...+.+|...|.+++|
T Consensus       239 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  318 (393)
T 1erj_A          239 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT  318 (393)
T ss_dssp             CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEE
T ss_pred             CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEE
Confidence            766544321     223346889999999999999999999999997653            234567789999999999


Q ss_pred             eCCCCEEEEccCCCcEEEeC
Q psy15417        157 TEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       157 ~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +|++.+|++|+.|+.|++||
T Consensus       319 ~~~~~~l~sgs~D~~v~iwd  338 (393)
T 1erj_A          319 TQNDEYILSGSKDRGVLFWD  338 (393)
T ss_dssp             CGGGCEEEEEETTSEEEEEE
T ss_pred             CCCCCEEEEEeCCCeEEEEE
Confidence            99999999999999999996

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.97  E-value=3.7e-31  Score=196.84  Aligned_cols=162  Identities=21%  Similarity=0.348  Sum_probs=136.2

Q ss_pred             ccCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~i   88 (176)
                      .+.||.+.|.+++|++  ++.+|++|+.|++|++||+++++  ....+.+|..+|++++|+|+  +..|++++.|++|++
T Consensus        52 ~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l  131 (316)
T 3bg1_A           52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL  131 (316)
T ss_dssp             EEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE
T ss_pred             EEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE
Confidence            4679999999999986  48899999999999999999873  56778899999999999998  789999999999999


Q ss_pred             eeCCCCCeeeE-EeecceEeceEEEEECCC-----------------CcEEEEEcCCCeEEEEeCCCc---eeeeeecCC
Q psy15417         89 FDIRADQELAM-YSHDNIICGITSVAFSRS-----------------GRLLLAGYDDFNCNVWDSMKT---ERAGILAGH  147 (176)
Q Consensus        89 wd~~~~~~~~~-~~~~~~~~~v~~~~~~~~-----------------~~~l~~g~~d~~i~v~d~~~~---~~~~~~~~~  147 (176)
                      ||++....... .....+...+.++.|+|+                 +.+|++|+.|++|++||+...   +....+.+|
T Consensus       132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h  211 (316)
T 3bg1_A          132 LTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH  211 (316)
T ss_dssp             EEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC
T ss_pred             EecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC
Confidence            99986533211 112223345778899987                 368999999999999998644   466678899


Q ss_pred             CccEEEEEEeCCC----CEEEEccCCCcEEEeC
Q psy15417        148 DNRVSCLGVTEDG----MAVATGSWDSFLRIWN  176 (176)
Q Consensus       148 ~~~i~~~~~~~~~----~~l~tg~~d~~v~vwd  176 (176)
                      ...|.+++|+|++    .+|++|+.|++|++||
T Consensus       212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~  244 (316)
T 3bg1_A          212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT  244 (316)
T ss_dssp             SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred             CCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence            9999999999986    7899999999999995

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.97  E-value=4.6e-30  Score=196.39  Aligned_cols=161  Identities=20%  Similarity=0.370  Sum_probs=141.2

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +.+|.+.|.+++|+|++.+|++|+.|++|++||+++++....+.+|..+|.+++|+|++..|++++.|++|++||+++++
T Consensus       135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~  214 (420)
T 3vl1_A          135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT  214 (420)
T ss_dssp             TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred             cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             eeeEEeec-ceE---------------------eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-CCCccEE
Q psy15417         96 ELAMYSHD-NII---------------------CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-GHDNRVS  152 (176)
Q Consensus        96 ~~~~~~~~-~~~---------------------~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-~~~~~i~  152 (176)
                      .+..+... .+.                     ..+.++.|+|++.++++|+.|+.+++||+..++....+. .|...+.
T Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~  294 (420)
T 3vl1_A          215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCN  294 (420)
T ss_dssp             EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEE
T ss_pred             eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCce
Confidence            66555321 111                     233445678999999999999999999998887666654 5788999


Q ss_pred             EEEEeCCCC-EEEEccCCCcEEEeC
Q psy15417        153 CLGVTEDGM-AVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~-~l~tg~~d~~v~vwd  176 (176)
                      +++|+|++. +|++|+.|+.|++||
T Consensus       295 ~~~~~~~~~~~l~~g~~dg~i~vwd  319 (420)
T 3vl1_A          295 SLTVDGNNANYIYAGYENGMLAQWD  319 (420)
T ss_dssp             EEEECSSCTTEEEEEETTSEEEEEE
T ss_pred             eEEEeCCCCCEEEEEeCCCeEEEEE
Confidence            999999998 999999999999996

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.97  E-value=2.9e-30  Score=199.56  Aligned_cols=160  Identities=23%  Similarity=0.242  Sum_probs=134.8

Q ss_pred             cCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCee--eeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeC
Q psy15417         16 ASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSC--KQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~   91 (176)
                      ..+|...|+|++|+| ++.+|++|+.||+|++||+.+++.  ...+.+|.++|++++|+| ++.+|++++.|++|++||+
T Consensus       115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~  194 (435)
T 4e54_B          115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF  194 (435)
T ss_dssp             EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred             CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence            456889999999999 567999999999999999987754  445668999999999998 6889999999999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEccCCC
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGSWDS  170 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~~d~  170 (176)
                      ++...............+.+++|+|++.++++|+.|+.|++||+. ++.+..+.+|...|.+++|+|++. +|++|+.|+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~  273 (435)
T 4e54_B          195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQ  273 (435)
T ss_dssp             TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTS
T ss_pred             cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcc
Confidence            765443333333333346789999999999999999999999974 566777889999999999999875 788999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      +|++||
T Consensus       274 ~v~iwd  279 (435)
T 4e54_B          274 TVKIWD  279 (435)
T ss_dssp             BCCEEE
T ss_pred             eeeEEe
Confidence            999996

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.97  E-value=1.6e-30  Score=196.57  Aligned_cols=160  Identities=20%  Similarity=0.206  Sum_probs=130.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      .+.+|.+.|.+++|+|++.+|++++.|++|++||+.+++   ....+.+|...|.+++|+|+++.|++++.|+.|++||+
T Consensus        50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  129 (377)
T 3dwl_C           50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYF  129 (377)
T ss_dssp             CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC
T ss_pred             EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEE
Confidence            467899999999999999999999999999999999877   67778889999999999999999999999999999999


Q ss_pred             CCCCe---eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC------------------CceeeeeecCCCcc
Q psy15417         92 RADQE---LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM------------------KTERAGILAGHDNR  150 (176)
Q Consensus        92 ~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~------------------~~~~~~~~~~~~~~  150 (176)
                      +.++.   ...... .+...+.+++|+|++.++++++.|+++++||+.                  .+++...+ +|...
T Consensus       130 ~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  207 (377)
T 3dwl_C          130 EQENDWWVSKHLKR-PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW  207 (377)
T ss_dssp             -----CCCCEEECS-SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS
T ss_pred             CCcccceeeeEeec-ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce
Confidence            87653   222221 134578999999999999999999999999974                  24455566 89999


Q ss_pred             EEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        151 VSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       151 i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |.+++|+|++.+|++|+.|+.|++||
T Consensus       208 v~~~~~sp~~~~l~~~~~d~~i~iwd  233 (377)
T 3dwl_C          208 VHAVGFSPSGNALAYAGHDSSVTIAY  233 (377)
T ss_dssp             EEEEEECTTSSCEEEEETTTEEC-CE
T ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            99999999999999999999999996

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.4e-30  Score=205.96  Aligned_cols=160  Identities=16%  Similarity=0.060  Sum_probs=137.5

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCCCeeEE--EEccCC-cEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAV--TFFPNG-WAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v--~~~~~~-~~l~s~s~d~~i~iwd   90 (176)
                      .+.+|...|++++|+++ ..|++|+.||+|++||+++++ ....+.+|..+|+++  .|.|++ .+|++++.|++|++||
T Consensus       261 ~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD  339 (524)
T 2j04_B          261 TLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN  339 (524)
T ss_dssp             EECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred             EEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence            46789999999999986 489999999999999999764 455789999999999  567777 8999999999999999


Q ss_pred             CCCCCeeeEEe-ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         91 IRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        91 ~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      +++.+....+. +.. ...+.+++|+|++..+++++.|+++++||+..+.....+.+|.+.|.+++|+|++.+|++|+.|
T Consensus       340 ~~~~~~~~~~~~~~~-~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D  418 (524)
T 2j04_B          340 PKDIATTKTTVSRFR-GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD  418 (524)
T ss_dssp             GGGHHHHCEEEEECS-CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT
T ss_pred             CCCCCcccccccccc-cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECC
Confidence            98766543332 211 1136679999999999999999999999998887777788999999999999999999999999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      ++|++||
T Consensus       419 gtv~lwd  425 (524)
T 2j04_B          419 GSLIITN  425 (524)
T ss_dssp             TEEECCB
T ss_pred             CEEEEEe
Confidence            9999996

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.97  E-value=2e-29  Score=192.67  Aligned_cols=162  Identities=22%  Similarity=0.357  Sum_probs=144.4

Q ss_pred             ccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC-------eeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCc
Q psy15417         15 AASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDG-------SCKQTFPGHESDINAVTFFPNG-WAFATGSDDAT   85 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~-------~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~   85 (176)
                      .+.+|.+.|.+++|+| ++.+|++|+.||+|++||+.++       +....+.+|...|.+++|+|++ +.|++++.|+.
T Consensus        76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~  155 (402)
T 2aq5_A           76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV  155 (402)
T ss_dssp             CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred             eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence            3678999999999999 8999999999999999999987       5678899999999999999997 69999999999


Q ss_pred             EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee-cCCCcc-EEEEEEeCCCCEE
Q psy15417         86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNR-VSCLGVTEDGMAV  163 (176)
Q Consensus        86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l  163 (176)
                      |++||+++++.+..+....+...+.+++|+|++.++++++.|+.+++||+..++.+..+ ..|.+. +.+++|+|++.+|
T Consensus       156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  235 (402)
T 2aq5_A          156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL  235 (402)
T ss_dssp             EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred             EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence            99999998776655421333457899999999999999999999999999998888887 678765 8899999999999


Q ss_pred             EEc---cCCCcEEEeC
Q psy15417        164 ATG---SWDSFLRIWN  176 (176)
Q Consensus       164 ~tg---~~d~~v~vwd  176 (176)
                      ++|   +.|+.|++||
T Consensus       236 ~~g~~~~~d~~i~iwd  251 (402)
T 2aq5_A          236 TTGFSRMSERQVALWD  251 (402)
T ss_dssp             EEEECTTCCEEEEEEE
T ss_pred             EEeccCCCCceEEEEc
Confidence            999   8999999996

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=6.6e-30  Score=190.50  Aligned_cols=157  Identities=8%  Similarity=0.092  Sum_probs=119.7

Q ss_pred             CCccCeEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC---CCeeEEEEccCCcEE------------EE
Q psy15417         18 GHTGDVMSLSLAP---DMRTFVSGACDASAKLWDIRDGSCKQTFPGHE---SDINAVTFFPNGWAF------------AT   79 (176)
Q Consensus        18 gh~~~V~~~~~~~---~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~---~~v~~v~~~~~~~~l------------~s   79 (176)
                      +|...+..++|++   ++.+|++|+.|++|++||+++++++.++.+|.   ..|.+++|+|++..+            ++
T Consensus       176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS  255 (356)
T 2w18_A          176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESL  255 (356)
T ss_dssp             ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC----------
T ss_pred             cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence            4555555555555   45678899999999999999999999998754   467788999999876            67


Q ss_pred             eeCCCcEEEeeCCCCCeeeEEee---cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEE-EEE
Q psy15417         80 GSDDATCRLFDIRADQELAMYSH---DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS-CLG  155 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~-~~~  155 (176)
                      |+.|+++++||..++..+.....   ..+...+.+.  +.++..+++|+.|++|+|||+.+++.+.++.+|...+. +++
T Consensus       256 Gs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~va  333 (356)
T 2w18_A          256 RSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVK  333 (356)
T ss_dssp             --CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEE
T ss_pred             cCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence            88999999999988776543321   1221122222  33467899999999999999999999999998987654 589


Q ss_pred             EeCCCCEEEEccCCCcEEEeC
Q psy15417        156 VTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       156 ~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |+|+|.+|++|+.|++|||||
T Consensus       334 fSPDG~~LaSGS~D~TIklWd  354 (356)
T 2w18_A          334 WSGTDSHLLAGQKDGNIFVYH  354 (356)
T ss_dssp             ECSSSSEEEEECTTSCEEEEE
T ss_pred             ECCCCCEEEEEECCCcEEEec
Confidence            999999999999999999996

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.97  E-value=2.2e-29  Score=186.67  Aligned_cols=161  Identities=20%  Similarity=0.299  Sum_probs=138.7

Q ss_pred             cCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC---------eeeeEecCCCCCeeEEEEccC--CcEEEEeeC
Q psy15417         16 ASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDG---------SCKQTFPGHESDINAVTFFPN--GWAFATGSD   82 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~---------~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~   82 (176)
                      +.+|.+.|.+++|+|  ++.+|++|+.||+|++||++++         +....+.+|..+|.+++|+|+  +..+++++.
T Consensus        53 ~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~  132 (351)
T 3f3f_A           53 WRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN  132 (351)
T ss_dssp             EECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred             eccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC
Confidence            568999999999999  6999999999999999999887         567888999999999999999  999999999


Q ss_pred             CCcEEEeeCCCCCeee----------------------------------------------------------EEeecc
Q psy15417         83 DATCRLFDIRADQELA----------------------------------------------------------MYSHDN  104 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~----------------------------------------------------------~~~~~~  104 (176)
                      |+.|++||+++.+.+.                                                          ......
T Consensus       133 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (351)
T 3f3f_A          133 DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG  212 (351)
T ss_dssp             TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC
T ss_pred             CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC
Confidence            9999999987543211                                                          111112


Q ss_pred             eEeceEEEEECCCC----cEEEEEcCCCeEEEEeCCCc------------------------------------------
Q psy15417        105 IICGITSVAFSRSG----RLLLAGYDDFNCNVWDSMKT------------------------------------------  138 (176)
Q Consensus       105 ~~~~v~~~~~~~~~----~~l~~g~~d~~i~v~d~~~~------------------------------------------  138 (176)
                      +...|.+++|+|++    .++++|+.|+.|++||+...                                          
T Consensus       213 h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (351)
T 3f3f_A          213 HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQS  292 (351)
T ss_dssp             CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CC
T ss_pred             CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecc
Confidence            33468899999998    89999999999999997653                                          


Q ss_pred             ----eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        139 ----ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       139 ----~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                          +.+..+.+|...|.+++|+|++.+|++|+.|+.|++||
T Consensus       293 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  334 (351)
T 3f3f_A          293 NLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWK  334 (351)
T ss_dssp             SEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred             cccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence                56667788999999999999999999999999999996

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.97  E-value=9.8e-29  Score=183.75  Aligned_cols=162  Identities=21%  Similarity=0.345  Sum_probs=136.2

Q ss_pred             ccCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCe-----eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGS-----CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~-----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i   88 (176)
                      .+.||++.|++++|+|+ +++|+||+.|++|++||+++.+     +...+++|..+|.+++|+|+++++++++.|+.+++
T Consensus        33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~  112 (340)
T 4aow_A           33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL  112 (340)
T ss_dssp             EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence            37899999999999997 6899999999999999997643     56788999999999999999999999999999999


Q ss_pred             eeCCCCCeeeEEee-----------------------------------------cceEeceEEEEECCCC--cEEEEEc
Q psy15417         89 FDIRADQELAMYSH-----------------------------------------DNIICGITSVAFSRSG--RLLLAGY  125 (176)
Q Consensus        89 wd~~~~~~~~~~~~-----------------------------------------~~~~~~v~~~~~~~~~--~~l~~g~  125 (176)
                      |+............                                         ..+...+..+.|++++  .++++++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~  192 (340)
T 4aow_A          113 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG  192 (340)
T ss_dssp             EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred             EeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc
Confidence            99765422111100                                         0011235677787764  5788899


Q ss_pred             CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       126 ~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .|+.+++||+...+....+.+|...|.+++|+|++.+|++|+.|+.|++||
T Consensus       193 ~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd  243 (340)
T 4aow_A          193 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD  243 (340)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred             CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999999999999999999999999999999999999996

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.97  E-value=3.7e-29  Score=189.69  Aligned_cols=161  Identities=19%  Similarity=0.152  Sum_probs=140.8

Q ss_pred             ccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEcc-CCcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFP-NGWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd   90 (176)
                      .+.+|.+.|.+++|+|++ .+|++|+.||.|++||+.+++....+.  +|...|.+++|+| ++..|++++.|+.|++||
T Consensus        68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd  147 (383)
T 3ei3_B           68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD  147 (383)
T ss_dssp             EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred             eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence            357899999999999998 899999999999999999887776665  6999999999999 789999999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEccCC
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGSWD  169 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~~d  169 (176)
                      +++...........+...+.+++|+|++.++++|+.|+.+++||+ +++....+.+|...|.+++|+|++. +|++|+.|
T Consensus       148 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  226 (383)
T 3ei3_B          148 FSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD  226 (383)
T ss_dssp             TTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred             CCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC
Confidence            986332222223323346889999999999999999999999997 6778888889999999999999998 99999999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      +.|++||
T Consensus       227 ~~i~iwd  233 (383)
T 3ei3_B          227 ATVKLWD  233 (383)
T ss_dssp             SEEEEEE
T ss_pred             CEEEEEe
Confidence            9999996

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.1e-29  Score=188.63  Aligned_cols=162  Identities=19%  Similarity=0.260  Sum_probs=141.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCeeeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR--DGSCKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd   90 (176)
                      .+.||.+.|.+++|+|++.+|++|+.||.|++||+.  +++....+.+|..+|++++|+|+  +.+|++++.|+.|++||
T Consensus         6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd   85 (379)
T 3jrp_A            6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   85 (379)
T ss_dssp             CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred             EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence            567899999999999999999999999999999998  55678889999999999999877  89999999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCce--eeeeecCCCccEEEEEEeC--------
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKTE--RAGILAGHDNRVSCLGVTE--------  158 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~--------  158 (176)
                      +++++.........+...+.++.|+|+  +.++++++.|+.+++||+....  ....+..|...|.+++|+|        
T Consensus        86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  165 (379)
T 3jrp_A           86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE  165 (379)
T ss_dssp             EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred             cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence            988753333333333457899999999  9999999999999999987763  3445668899999999999        


Q ss_pred             -----CCCEEEEccCCCcEEEeC
Q psy15417        159 -----DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       159 -----~~~~l~tg~~d~~v~vwd  176 (176)
                           ++.+|++|+.|+.|++||
T Consensus       166 ~~~~~~~~~l~~~~~dg~i~i~d  188 (379)
T 3jrp_A          166 HNGTKESRKFVTGGADNLVKIWK  188 (379)
T ss_dssp             ----CTTCEEEEEETTSCEEEEE
T ss_pred             ccCCCCCCEEEEEeCCCeEEEEE
Confidence                 689999999999999996

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.97  E-value=3.9e-29  Score=192.33  Aligned_cols=175  Identities=19%  Similarity=0.361  Sum_probs=137.1

Q ss_pred             CccccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec----------------------
Q psy15417          2 CDHLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP----------------------   59 (176)
Q Consensus         2 ~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~----------------------   59 (176)
                      +||.+++..+....+.+|...|++++|+|++.+|++|+.||+|++||+++++++..+.                      
T Consensus       129 lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d  208 (420)
T 4gga_A          129 LWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRS  208 (420)
T ss_dssp             EEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred             EEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCC
Confidence            3556666666555667899999999999999999999999999999998887655544                      


Q ss_pred             -------------------CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe--------------ee--------
Q psy15417         60 -------------------GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--------------LA--------   98 (176)
Q Consensus        60 -------------------~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~--------------~~--------   98 (176)
                                         +|...+..+.+.|++..+++++.|+.+++|+...++.              +.        
T Consensus       209 ~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~  288 (420)
T 4gga_A          209 GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ  288 (420)
T ss_dssp             SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTC
T ss_pred             CceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCc
Confidence                               4555566677777778888888888888888653210              00        


Q ss_pred             ----------------EEeec--------ceEeceEEEEECCCCcEEEEEc--CCCeEEEEeCCCceeeeeecCCCccEE
Q psy15417         99 ----------------MYSHD--------NIICGITSVAFSRSGRLLLAGY--DDFNCNVWDSMKTERAGILAGHDNRVS  152 (176)
Q Consensus        99 ----------------~~~~~--------~~~~~v~~~~~~~~~~~l~~g~--~d~~i~v~d~~~~~~~~~~~~~~~~i~  152 (176)
                                      .+...        .....+.++.|+|++..+++++  .|+.|++||..+++++..+.+|...|.
T Consensus       289 ~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~  368 (420)
T 4gga_A          289 SNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL  368 (420)
T ss_dssp             TTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred             ccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence                            00000        0012366788999998877654  789999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        153 CLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++|+|+|.+|+||+.|++|++||
T Consensus       369 ~l~~spdg~~l~S~s~D~tvriWd  392 (420)
T 4gga_A          369 SLTMSPDGATVASAAADETLRLWR  392 (420)
T ss_dssp             EEEECTTSSCEEEEETTTEEEEEC
T ss_pred             EEEEcCCCCEEEEEecCCeEEEEE
Confidence            999999999999999999999997

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.97  E-value=1.2e-30  Score=197.32  Aligned_cols=161  Identities=14%  Similarity=0.129  Sum_probs=133.2

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG--SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      ...|.++|++++|+|++.+|++|+.|+.|++||+.++  ++...+.+|..+|.+++|+|++++|++++.|++|++||+.+
T Consensus         7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~   86 (377)
T 3dwl_C            7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP   86 (377)
T ss_dssp             EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred             EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence            3446789999999999999999999999999999988  78889999999999999999999999999999999999987


Q ss_pred             CC-eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce---eeeeecC-CCccEEEEEEeCCCCEEEEccC
Q psy15417         94 DQ-ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE---RAGILAG-HDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        94 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      ++ .........+...+.++.|+|++.++++++.|+.+++||+...+   ....+.. |...|.+++|+|++.+|++|+.
T Consensus        87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~  166 (377)
T 3dwl_C           87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA  166 (377)
T ss_dssp             --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred             CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence            65 11122222334578999999999999999999999999988766   3566666 9999999999999999999999


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      |+.|++||
T Consensus       167 d~~i~iwd  174 (377)
T 3dwl_C          167 DRKAYVLS  174 (377)
T ss_dssp             SSCEEEEE
T ss_pred             CCEEEEEE
Confidence            99999996

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.97  E-value=9e-30  Score=196.76  Aligned_cols=171  Identities=14%  Similarity=0.173  Sum_probs=137.3

Q ss_pred             ccccccccCCCcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCC--CCCeeEEEEccCCcEEEE
Q psy15417          3 DHLDKSALLGSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGH--ESDINAVTFFPNGWAFAT   79 (176)
Q Consensus         3 ~~~~~~~~~~~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s   79 (176)
                      |++++........+.||.+.|++++|+| ++.+|++|+.||+|++||++++........+  ...+.+++|+|++.+|++
T Consensus       147 Wd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  226 (435)
T 4e54_B          147 WNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVT  226 (435)
T ss_dssp             ECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEE
T ss_pred             EECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEE
Confidence            4554444444445679999999999998 6889999999999999999877554444333  356789999999999999


Q ss_pred             eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeee---eecCCCccEEEEE
Q psy15417         80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAG---ILAGHDNRVSCLG  155 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~---~~~~~~~~i~~~~  155 (176)
                      |+.|+.|++||++.... ..  ...+...|.+++|+|++. ++++|+.|++|++||+...+...   ...+|...|.+++
T Consensus       227 g~~dg~i~~wd~~~~~~-~~--~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~  303 (435)
T 4e54_B          227 GDNVGNVILLNMDGKEL-WN--LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAAC  303 (435)
T ss_dssp             ECSSSBEEEEESSSCBC-CC--SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECC
T ss_pred             EeCCCcEeeeccCccee-EE--EecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccccee
Confidence            99999999999875432 22  222335688999999976 78899999999999987655433   3357899999999


Q ss_pred             EeCCCCEEEEccCCCcEEEeC
Q psy15417        156 VTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       156 ~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |+|++.+|++|+.|++|+|||
T Consensus       304 ~spdg~~l~s~~~D~~i~iwd  324 (435)
T 4e54_B          304 FSPDGARLLTTDQKSEIRVYS  324 (435)
T ss_dssp             BCTTSSEEEEEESSSCEEEEE
T ss_pred             ECCCCCeeEEEcCCCEEEEEE
Confidence            999999999999999999996

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.97  E-value=7.4e-29  Score=186.48  Aligned_cols=161  Identities=12%  Similarity=0.105  Sum_probs=141.3

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      +..|.++|.+++|+|++.+|++++.|+.|++||+.+++  ....+.+|..+|.+++|+|++..+++++.|+.|++||+++
T Consensus         4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~   83 (372)
T 1k8k_C            4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG   83 (372)
T ss_dssp             EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred             ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence            45599999999999999999999999999999999987  8889999999999999999999999999999999999987


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce----eeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE----RAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      .+.........+...+.++.|+|++.++++++.|+.+++||+...+    .......|...|.+++|+|++.+|++|+.|
T Consensus        84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  163 (372)
T 1k8k_C           84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD  163 (372)
T ss_dssp             TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred             CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence            7644443333334578899999999999999999999999987654    223335788899999999999999999999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      +.|++||
T Consensus       164 g~i~~~d  170 (372)
T 1k8k_C          164 FKCRIFS  170 (372)
T ss_dssp             SCEEEEE
T ss_pred             CCEEEEE
Confidence            9999996

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.5e-29  Score=187.27  Aligned_cols=162  Identities=20%  Similarity=0.318  Sum_probs=141.8

Q ss_pred             ccCCCccCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~i   88 (176)
                      .+.+|.+.|.+++|+++  +.+|++|+.||.|++||+++++  ....+..|..+|.+++|+|+  +..+++++.|+.|++
T Consensus        50 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v  129 (379)
T 3jrp_A           50 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV  129 (379)
T ss_dssp             EECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred             EecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence            46789999999999987  8999999999999999999987  77888899999999999999  999999999999999


Q ss_pred             eeCCCCCeeeEEeecceEeceEEEEECC-------------CCcEEEEEcCCCeEEEEeCCCce----eeeeecCCCccE
Q psy15417         89 FDIRADQELAMYSHDNIICGITSVAFSR-------------SGRLLLAGYDDFNCNVWDSMKTE----RAGILAGHDNRV  151 (176)
Q Consensus        89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~g~~d~~i~v~d~~~~~----~~~~~~~~~~~i  151 (176)
                      ||++............+...+.++.|+|             ++..+++++.|+.|++||+....    ....+.+|...|
T Consensus       130 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v  209 (379)
T 3jrp_A          130 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV  209 (379)
T ss_dssp             EECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred             EecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcE
Confidence            9998775443333333345788999999             68999999999999999976543    445677899999


Q ss_pred             EEEEEeCC---CCEEEEccCCCcEEEeC
Q psy15417        152 SCLGVTED---GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~---~~~l~tg~~d~~v~vwd  176 (176)
                      .+++|+|+   +.+|++++.|+.|++||
T Consensus       210 ~~~~~sp~~~~~~~l~s~~~dg~i~iwd  237 (379)
T 3jrp_A          210 RDVAWSPTVLLRSYLASVSQDRTCIIWT  237 (379)
T ss_dssp             EEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred             eEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence            99999999   89999999999999996

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.97  E-value=1.8e-28  Score=194.50  Aligned_cols=157  Identities=30%  Similarity=0.539  Sum_probs=140.3

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|...|.+++|+|++++|++++.|+.|++||. +++....+.+|..+|.+++|+|+++.+++++.|+++++||.. .
T Consensus       380 ~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~  457 (577)
T 2ymu_A          380 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-G  457 (577)
T ss_dssp             EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-S
T ss_pred             EecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-C
Confidence            35689999999999999999999999999999995 567788999999999999999999999999999999999964 3


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +.+....  .+...+.+++|+|+++++++++.|++|++|| .+++.+..+.+|...|.+++|+|++.+|++++.|+.|++
T Consensus       458 ~~~~~~~--~~~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~l  534 (577)
T 2ymu_A          458 QLLQTLT--GHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL  534 (577)
T ss_dssp             CEEEEEE--CCSSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred             CEEEEEc--CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEE
Confidence            4333322  2334688999999999999999999999999 567888889999999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       535 wd  536 (577)
T 2ymu_A          535 WN  536 (577)
T ss_dssp             EC
T ss_pred             Ee
Confidence            97

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.97  E-value=4.6e-28  Score=179.58  Aligned_cols=158  Identities=22%  Similarity=0.374  Sum_probs=143.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|...|.+++|+|++.++++++.||.|++||+++++....+++|...+.+++|+|++..+++++.|+.+++||+++.
T Consensus       136 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~  215 (337)
T 1gxr_A          136 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG  215 (337)
T ss_dssp             EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred             ecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence            46679999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +.+....+.   ..+.++.|+|++..+++++.++.+++||+...+. ..+..|...+.+++|+|++.+|++++.|+.|++
T Consensus       216 ~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~  291 (337)
T 1gxr_A          216 RQLQQHDFT---SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA  291 (337)
T ss_dssp             EEEEEEECS---SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             ceEeeecCC---CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEE
Confidence            766655443   3578899999999999999999999999877665 456788999999999999999999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       292 ~~  293 (337)
T 1gxr_A          292 WR  293 (337)
T ss_dssp             EE
T ss_pred             EE
Confidence            96

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.96  E-value=4.7e-28  Score=206.78  Aligned_cols=162  Identities=22%  Similarity=0.345  Sum_probs=148.9

Q ss_pred             CcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         13 SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ...+.+|.+.|++++|+|+++++++|+.||+|++||+.+++.+..+.+|...|.+++|+|+++++++++.|++|++||+.
T Consensus       608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~  687 (1249)
T 3sfz_A          608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA  687 (1249)
T ss_dssp             SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence            34567999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeeeEEeecceEeceEEEEECC--CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      +++.+..+..  +...+.++.|+|  ++.++++|+.|+.+++||+.+++....+.+|...|.+++|+|++.++++|+.|+
T Consensus       688 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg  765 (1249)
T 3sfz_A          688 TGKLVHTYDE--HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG  765 (1249)
T ss_dssp             TCCEEEEEEC--CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred             CCceEEEEcC--CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence            8877665432  335688999999  456899999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      +|++||
T Consensus       766 ~v~vwd  771 (1249)
T 3sfz_A          766 TLRLWD  771 (1249)
T ss_dssp             EEEEEE
T ss_pred             eEEEEe
Confidence            999996

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.96  E-value=1.6e-27  Score=177.20  Aligned_cols=158  Identities=23%  Similarity=0.378  Sum_probs=136.8

Q ss_pred             ccCCCccCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~--~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ...+|...|.+++|++++  .++++++.|++|++||++++++...+.+|..+|++++|+|++++|++++.|+.|++||++
T Consensus       166 ~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~  245 (340)
T 4aow_A          166 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN  245 (340)
T ss_dssp             CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred             EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEec
Confidence            356899999999998865  578999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee---------cCCCccEEEEEEeCCCCEE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL---------AGHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~l  163 (176)
                      +.+.+..+...   ..+.++.|+|++.++ +++.|+.|++||++.......+         .+|...|.+++|+|++.+|
T Consensus       246 ~~~~~~~~~~~---~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l  321 (340)
T 4aow_A          246 EGKHLYTLDGG---DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTL  321 (340)
T ss_dssp             TTEEEEEEECS---SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEE
T ss_pred             cCceeeeecCC---ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEE
Confidence            87776655443   357889999987655 5557899999998876654443         3678899999999999999


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      ++|+.|+.|+|||
T Consensus       322 ~sgs~Dg~v~iW~  334 (340)
T 4aow_A          322 FAGYTDNLVRVWQ  334 (340)
T ss_dssp             EEEETTSCEEEEE
T ss_pred             EEEeCCCEEEEEe
Confidence            9999999999996

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.96  E-value=3.9e-28  Score=179.95  Aligned_cols=159  Identities=21%  Similarity=0.407  Sum_probs=139.0

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee---eeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC---KQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~---~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      .+|.+.|.+++|+|+++++++++ ||.|++||+.+++.   ...+.  +|..+|.+++|+|+++.+++++.|+.|++||+
T Consensus        48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~  126 (337)
T 1gxr_A           48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL  126 (337)
T ss_dssp             ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred             ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence            47999999999999999999999 99999999987653   23333  78899999999999999999999999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      ++++.........+...+.++.|+|++.++++++.++.+++||+..++....+..|...+.+++|+|++.+|++++.|+.
T Consensus       127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  206 (337)
T 1gxr_A          127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT  206 (337)
T ss_dssp             CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCc
Confidence            87764333333333456889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      |++||
T Consensus       207 i~~~d  211 (337)
T 1gxr_A          207 VRSWD  211 (337)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99996

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.96  E-value=4.2e-28  Score=184.10  Aligned_cols=159  Identities=17%  Similarity=0.208  Sum_probs=143.5

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC---C---CCCeeEEEEccCCcEEEEeeCC---CcEE
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---H---ESDINAVTFFPNGWAFATGSDD---ATCR   87 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~---h---~~~v~~v~~~~~~~~l~s~s~d---~~i~   87 (176)
                      ..|...|.+++|+|++ ++++++.|+.|++||+++++.+..+..   |   ..+|.+++|+|++.+|++++.|   +.|+
T Consensus       183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~  261 (397)
T 1sq9_A          183 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT  261 (397)
T ss_dssp             SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred             cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence            4588999999999999 999999999999999999999999998   9   9999999999999999999999   9999


Q ss_pred             EeeCCCCCeeeEEeecc-----------eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec------CC---
Q psy15417         88 LFDIRADQELAMYSHDN-----------IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA------GH---  147 (176)
Q Consensus        88 iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~------~~---  147 (176)
                      +||+++.+.+..+....           +...+.++.|+|++.++++++.|+.+++||+..++.+..+.      +|   
T Consensus       262 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  341 (397)
T 1sq9_A          262 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED  341 (397)
T ss_dssp             EEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG
T ss_pred             EEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhh
Confidence            99999887665554310           33568899999999999999999999999999999888888      77   


Q ss_pred             ------------CccEEEEEEeCCC----------CEEEEccCCCcEEEeC
Q psy15417        148 ------------DNRVSCLGVTEDG----------MAVATGSWDSFLRIWN  176 (176)
Q Consensus       148 ------------~~~i~~~~~~~~~----------~~l~tg~~d~~v~vwd  176 (176)
                                  ...|.+++|+|++          .+|++|+.|+.|++||
T Consensus       342 ~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~  392 (397)
T 1sq9_A          342 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR  392 (397)
T ss_dssp             CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred             hhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence                        8999999999998          7999999999999996

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.96  E-value=5.2e-28  Score=181.83  Aligned_cols=162  Identities=22%  Similarity=0.288  Sum_probs=140.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE--ecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT--FPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|...|.+++|+|++.+|++++.||.|++||+++++....  +..|...|.+++|+|++..+++++.|+.+++||++
T Consensus        47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~  126 (372)
T 1k8k_C           47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE  126 (372)
T ss_dssp             EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEE
T ss_pred             eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEec
Confidence            4668999999999999999999999999999999998875444  46789999999999999999999999999999998


Q ss_pred             CCCeeeEE--eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeC------------------CCceeeeeecCCCccEE
Q psy15417         93 ADQELAMY--SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDS------------------MKTERAGILAGHDNRVS  152 (176)
Q Consensus        93 ~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~------------------~~~~~~~~~~~~~~~i~  152 (176)
                      ........  ....+...+.++.|+|++.++++++.|+.+++||+                  ..++....+..|...+.
T Consensus       127 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  206 (372)
T 1k8k_C          127 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVH  206 (372)
T ss_dssp             TTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEE
T ss_pred             CCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEE
Confidence            76642211  11223457899999999999999999999999995                  35677778888999999


Q ss_pred             EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        153 CLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++|+|++.+|++++.|+.|++||
T Consensus       207 ~~~~~~~~~~l~~~~~d~~i~i~d  230 (372)
T 1k8k_C          207 GVCFSANGSRVAWVSHDSTVCLAD  230 (372)
T ss_dssp             EEEECSSSSEEEEEETTTEEEEEE
T ss_pred             EEEECCCCCEEEEEeCCCEEEEEE
Confidence            999999999999999999999996

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.96  E-value=9.2e-28  Score=179.72  Aligned_cols=122  Identities=19%  Similarity=0.391  Sum_probs=106.9

Q ss_pred             ccCCCccCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCC-Ceee-eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         15 AASGHTGDVMSLSLAPD---MRTFVSGACDASAKLWDIRD-GSCK-QTFPGHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~---~~~l~s~s~dg~v~~wd~~~-~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      .+.+|.+.|++++|+|+   +.+|++|+.||.|++||+++ ++.. ..+.+|..+|++++|+|++.+|++++.|+.|++|
T Consensus        34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw  113 (368)
T 3mmy_A           34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW  113 (368)
T ss_dssp             CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence            46789999999999999   59999999999999999987 5444 7888999999999999999999999999999999


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEE--CCCCcEEEEEcCCCeEEEEeCCCce
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAF--SRSGRLLLAGYDDFNCNVWDSMKTE  139 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~g~~d~~i~v~d~~~~~  139 (176)
                      |+++++......+.   ..+.++.|  +|++.++++++.|+.+++||+..++
T Consensus       114 d~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  162 (368)
T 3mmy_A          114 DLSSNQAIQIAQHD---APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN  162 (368)
T ss_dssp             ETTTTEEEEEEECS---SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred             EcCCCCceeecccc---CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence            99987766544443   46888999  8999999999999999999976543

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.96  E-value=5.8e-28  Score=198.23  Aligned_cols=160  Identities=19%  Similarity=0.360  Sum_probs=146.5

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|.+.|.+++|+|++.+|++++.||.|++||+.+++....+.+|..+|.+++|+|++..|++++.|+.|++||+.++
T Consensus         8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~   87 (814)
T 3mkq_A            8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG   87 (814)
T ss_dssp             EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred             eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence            47889999999999999999999999999999999999999999999999999999999999999999999999999888


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeC-CCCEEEEccCCCcE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTE-DGMAVATGSWDSFL  172 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~tg~~d~~v  172 (176)
                      +.+..+.  .+...+.++.|+|+++.+++++.|+.+++||+..+ .....+.+|...+.+++|+| ++..|++++.|+.|
T Consensus        88 ~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v  165 (814)
T 3mkq_A           88 EKVVDFE--AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV  165 (814)
T ss_dssp             CEEEEEE--CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred             cEEEEEe--cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence            7665543  22346889999999999999999999999998876 66777888999999999999 78899999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       166 ~vwd  169 (814)
T 3mkq_A          166 KVWS  169 (814)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9996

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.96  E-value=1.4e-27  Score=194.03  Aligned_cols=160  Identities=25%  Similarity=0.443  Sum_probs=136.6

Q ss_pred             ccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCC-----eeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDG-----SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~-----~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i   88 (176)
                      .+.+|.+.|++++|+|++ .+|+||+.|++|++||+.+.     .....+.+|...|.+++|+|++++|++++.|++|++
T Consensus       377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v  456 (694)
T 3dm0_A          377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL  456 (694)
T ss_dssp             EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence            367999999999999864 79999999999999999753     456788999999999999999999999999999999


Q ss_pred             eeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee---ecCCCccEEEEEEeCCC--CEE
Q psy15417         89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI---LAGHDNRVSCLGVTEDG--MAV  163 (176)
Q Consensus        89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~---~~~~~~~i~~~~~~~~~--~~l  163 (176)
                      ||+.++.....+.  .+...|.+++|+|++..+++|+.|++|++||.........   ..+|...|.+++|+|++  ..|
T Consensus       457 wd~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l  534 (694)
T 3dm0_A          457 WDLAAGVSTRRFV--GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI  534 (694)
T ss_dssp             EETTTTEEEEEEE--CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred             EECCCCcceeEEe--CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence            9998876654432  3335689999999999999999999999999755433322   24688899999999986  589


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      ++|+.|++|++||
T Consensus       535 ~s~s~d~~v~vwd  547 (694)
T 3dm0_A          535 VSASWDKTVKVWN  547 (694)
T ss_dssp             EEEETTSCEEEEE
T ss_pred             EEEeCCCeEEEEE
Confidence            9999999999996

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.1e-27  Score=184.40  Aligned_cols=159  Identities=19%  Similarity=0.363  Sum_probs=132.7

Q ss_pred             CCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCC---Ce---eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         17 SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRD---GS---CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        17 ~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~---~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      .+|.+.|++++|+| ++.+|++|+.||+|++||+.+   +.   +...+ +|..+|.+++|+|++..|++++.|+.|++|
T Consensus        60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw  138 (437)
T 3gre_A           60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVL  138 (437)
T ss_dssp             TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence            78999999999999 999999999999999999976   43   23333 489999999999999999999999999999


Q ss_pred             eCC---CCCeeeEEeec--------c--eEeceEEEE--ECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC--CCccEE
Q psy15417         90 DIR---ADQELAMYSHD--------N--IICGITSVA--FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG--HDNRVS  152 (176)
Q Consensus        90 d~~---~~~~~~~~~~~--------~--~~~~v~~~~--~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~--~~~~i~  152 (176)
                      |+.   +++........        .  ....+.++.  +++++.++++|+.|+.|++||+..++.+..+..  |...|.
T Consensus       139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~  218 (437)
T 3gre_A          139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVS  218 (437)
T ss_dssp             EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEE
T ss_pred             EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceE
Confidence            984   33333221110        0  112344444  667899999999999999999999988888887  889999


Q ss_pred             EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        153 CLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++|+|++.+|++|+.|+.|++||
T Consensus       219 ~~~~s~~~~~l~s~~~dg~i~iwd  242 (437)
T 3gre_A          219 SICIDEECCVLILGTTRGIIDIWD  242 (437)
T ss_dssp             EEEECTTSCEEEEEETTSCEEEEE
T ss_pred             EEEECCCCCEEEEEcCCCeEEEEE
Confidence            999999999999999999999996

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.96  E-value=1.6e-27  Score=180.63  Aligned_cols=168  Identities=14%  Similarity=0.169  Sum_probs=137.1

Q ss_pred             cccccccCCCcccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCC---CCCeeEEEEccCCcEEEE
Q psy15417          4 HLDKSALLGSPAASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGH---ESDINAVTFFPNGWAFAT   79 (176)
Q Consensus         4 ~~~~~~~~~~~~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h---~~~v~~v~~~~~~~~l~s   79 (176)
                      ++++..........+|.+.|.+++|+| ++.+|++++.|+.|++||+++ +....+..+   ...|.+++|+|++..|++
T Consensus       102 d~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  180 (383)
T 3ei3_B          102 DYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLAT  180 (383)
T ss_dssp             ETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEE
T ss_pred             eCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEE
Confidence            333333333333457999999999999 789999999999999999986 445555544   488999999999999999


Q ss_pred             eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCC----ceeeeeecCCCccEEEE
Q psy15417         80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK----TERAGILAGHDNRVSCL  154 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~----~~~~~~~~~~~~~i~~~  154 (176)
                      ++.|+.|++||++ ++.+..+.  .+...+.+++|+|++. ++++++.|+.+++||+..    ......+ +|...|.++
T Consensus       181 ~~~d~~i~i~d~~-~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~  256 (383)
T 3ei3_B          181 GDSTGRLLLLGLD-GHEIFKEK--LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAA  256 (383)
T ss_dssp             EETTSEEEEEETT-SCEEEEEE--CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEE
T ss_pred             ECCCCCEEEEECC-CCEEEEec--cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEE
Confidence            9999999999995 44433332  2335688999999998 999999999999999876    4455555 689999999


Q ss_pred             EEeC-CCCEEEEccCCCcEEEeC
Q psy15417        155 GVTE-DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       155 ~~~~-~~~~l~tg~~d~~v~vwd  176 (176)
                      +|+| ++.+|++++.|+.|++||
T Consensus       257 ~~s~~~~~~l~~~~~d~~i~iwd  279 (383)
T 3ei3_B          257 YFNPTDSTKLLTTDQRNEIRVYS  279 (383)
T ss_dssp             EECTTTSCEEEEEESSSEEEEEE
T ss_pred             EEcCCCCCEEEEEcCCCcEEEEE
Confidence            9999 999999999999999996

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.96  E-value=7.8e-27  Score=174.74  Aligned_cols=158  Identities=20%  Similarity=0.351  Sum_probs=145.0

Q ss_pred             cCCCcc--CeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         16 ASGHTG--DVMSLSLAPDMRTFVSGACDASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        16 ~~gh~~--~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      +.+|.+  .+.+++|+|++.+|++++.||.|++||+++ .+....+..|..+|.+++|+|++..|++++.|+.|++||++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~  248 (369)
T 3zwl_B          169 IITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS  248 (369)
T ss_dssp             EECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             ccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence            345666  999999999999999999999999999998 78889999999999999999999999999999999999999


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC--------------eEEEEeCCCceeeeeecCCCccEEEEEEeC
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF--------------NCNVWDSMKTERAGILAGHDNRVSCLGVTE  158 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~--------------~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~  158 (176)
                      +.+....+...   ..+..+.|+|++..+++++.++              .+++||...++....+.+|...|.+++|+|
T Consensus       249 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~  325 (369)
T 3zwl_B          249 TLQVLKKYETD---CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISP  325 (369)
T ss_dssp             TCCEEEEEECS---SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred             CCceeeeecCC---CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECC
Confidence            88777666533   3578899999999999999888              899999999999999999999999999999


Q ss_pred             CCCEEEEccCCCcEEEeC
Q psy15417        159 DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       159 ~~~~l~tg~~d~~v~vwd  176 (176)
                      ++.+|++|+.|+.|++||
T Consensus       326 ~~~~l~s~~~dg~v~iw~  343 (369)
T 3zwl_B          326 QGTSYASGGEDGFIRLHH  343 (369)
T ss_dssp             TSSEEEEEETTSEEEEEE
T ss_pred             CCCEEEEEcCCCeEEEEE
Confidence            999999999999999996

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.96  E-value=1.2e-27  Score=184.14  Aligned_cols=158  Identities=15%  Similarity=0.247  Sum_probs=131.7

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-----------eeeEecCCC------------CCeeEEEEccCC
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-----------CKQTFPGHE------------SDINAVTFFPNG   74 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-----------~~~~~~~h~------------~~v~~v~~~~~~   74 (176)
                      .|.+.|.+++|+|++.+|++|+.||.|++||+.+++           ....+.+|.            .+|++++|+|++
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            478999999999999999999999999999998876           577899998            889999999998


Q ss_pred             --cEEEEeeCCCcEEEeeCCCCCeeeE--------------------------------------EeecceEeceEEEEE
Q psy15417         75 --WAFATGSDDATCRLFDIRADQELAM--------------------------------------YSHDNIICGITSVAF  114 (176)
Q Consensus        75 --~~l~s~s~d~~i~iwd~~~~~~~~~--------------------------------------~~~~~~~~~v~~~~~  114 (176)
                        ..|++++.|++|++||+.+.+....                                      .-...+...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              7999999999999999865322100                                      001223356889999


Q ss_pred             CCCCcEEEEEcCCCeEEEEeCCCc-eeee-------eecCCCccEEEEEEeCCC-CEEEEccCCCcEEEeC
Q psy15417        115 SRSGRLLLAGYDDFNCNVWDSMKT-ERAG-------ILAGHDNRVSCLGVTEDG-MAVATGSWDSFLRIWN  176 (176)
Q Consensus       115 ~~~~~~l~~g~~d~~i~v~d~~~~-~~~~-------~~~~~~~~i~~~~~~~~~-~~l~tg~~d~~v~vwd  176 (176)
                      +|++.++++| .|++|++||+... +...       .+.+|...|.+++|+|++ .+|++|+.|+.|++||
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd  255 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCD  255 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEE
Confidence            9999999999 8999999998743 3333       356889999999999998 9999999999999996

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.96  E-value=2.6e-27  Score=183.56  Aligned_cols=159  Identities=28%  Similarity=0.494  Sum_probs=137.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEc--cCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF--PNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|.+.|.+++|+|++ ++++|+.||+|++||++++++...+.+|..+|.+++|.  +++..+++++.|++|++||++
T Consensus       157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~  235 (464)
T 3v7d_B          157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP  235 (464)
T ss_dssp             EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECC
T ss_pred             EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCC
Confidence            356899999999999887 99999999999999999999999999999999999998  467899999999999999998


Q ss_pred             CCCeeeE---------------------EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccE
Q psy15417         93 ADQELAM---------------------YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV  151 (176)
Q Consensus        93 ~~~~~~~---------------------~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i  151 (176)
                      +......                     .....+...+.++  ++++.++++|+.|+.+++||+.+++.+..+.+|...|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v  313 (464)
T 3v7d_B          236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRI  313 (464)
T ss_dssp             CCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred             CCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCE
Confidence            7653321                     1112222334444  5778999999999999999999999999999999999


Q ss_pred             EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        152 SCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .+++|+|++.++++|+.|+.|++||
T Consensus       314 ~~~~~~~~~~~l~sg~~dg~i~vwd  338 (464)
T 3v7d_B          314 YSTIYDHERKRCISASMDTTIRIWD  338 (464)
T ss_dssp             EEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEE
Confidence            9999999999999999999999996

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.96  E-value=2.3e-27  Score=181.17  Aligned_cols=162  Identities=22%  Similarity=0.322  Sum_probs=137.9

Q ss_pred             ccCCCccCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEe--cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         15 AASGHTGDVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTF--PGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      .+.+|.+.|.+++|+|++ .+|++++.|++|++||+++++....+  .+|...|.+++|+|++..|++++.|+.|++||+
T Consensus       126 ~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  205 (402)
T 2aq5_A          126 TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEP  205 (402)
T ss_dssp             EEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEET
T ss_pred             EecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeC
Confidence            477899999999999998 69999999999999999999999999  889999999999999999999999999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEE---cCCCeEEEEeCCCcee-eeee-cCCCccEEEEEEeCCCCEEE-E
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAG---YDDFNCNVWDSMKTER-AGIL-AGHDNRVSCLGVTEDGMAVA-T  165 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g---~~d~~i~v~d~~~~~~-~~~~-~~~~~~i~~~~~~~~~~~l~-t  165 (176)
                      ++++.+..+...+....+..+.|+|++.++++|   +.++.+++||+...+. .... ..|...+.+++|+|++.+|+ +
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  285 (402)
T 2aq5_A          206 RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLC  285 (402)
T ss_dssp             TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEE
T ss_pred             CCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEE
Confidence            987766554222221236789999999999999   7999999999877543 2222 35667899999999999986 5


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      |+.|+.|++||
T Consensus       286 g~~dg~i~i~d  296 (402)
T 2aq5_A          286 GKGDSSIRYFE  296 (402)
T ss_dssp             ETTCSCEEEEE
T ss_pred             EcCCCeEEEEE
Confidence            66899999996

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.96  E-value=2.3e-27  Score=180.72  Aligned_cols=159  Identities=18%  Similarity=0.246  Sum_probs=144.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|...|.+++|+|++.+|++++.|+.|++||+++++....+.+|...|.+++|+|++ .+++++.|+.|++||+++.
T Consensus       242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~  320 (425)
T 1r5m_A          242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN  320 (425)
T ss_dssp             EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT
T ss_pred             eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC
Confidence            356899999999999999999999999999999999999999999999999999999999 9999999999999999887


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce--------------------eeeeecCCCc--cEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE--------------------RAGILAGHDN--RVS  152 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~--------------------~~~~~~~~~~--~i~  152 (176)
                      +.+..+...  ...+.++.|+|++.++++++.|+.+++||+...+                    .+..+..|..  .|.
T Consensus       321 ~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  398 (425)
T 1r5m_A          321 TLLALSIVD--GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIF  398 (425)
T ss_dssp             EEEEEEECT--TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEE
T ss_pred             cEeEecccC--CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceE
Confidence            766554432  2468899999999999999999999999988777                    7888888876  999


Q ss_pred             EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        153 CLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++|+|++.+|++++.|+.|++||
T Consensus       399 ~~~~s~~~~~l~~~~~dg~i~iw~  422 (425)
T 1r5m_A          399 DLSWNCAGNKISVAYSLQEGSVVA  422 (425)
T ss_dssp             EEEECTTSSEEEEEESSSCCEEEE
T ss_pred             EEEccCCCceEEEEecCceEEEEe
Confidence            999999999999999999999996

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.96  E-value=1.5e-27  Score=178.55  Aligned_cols=160  Identities=21%  Similarity=0.318  Sum_probs=137.2

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEE--ccCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF--FPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~--~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|.+.|.+++|+|++.+|++++.||.|++||+++++... +.+|..+|.+++|  +|++..|++++.|+.|++||++
T Consensus        81 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  159 (368)
T 3mmy_A           81 AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR  159 (368)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred             EeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence            467899999999999999999999999999999999998766 5569999999999  8899999999999999999987


Q ss_pred             CCCeeeEEee----------------------------------------------------------------------
Q psy15417         93 ADQELAMYSH----------------------------------------------------------------------  102 (176)
Q Consensus        93 ~~~~~~~~~~----------------------------------------------------------------------  102 (176)
                      +++.+..+..                                                                      
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~  239 (368)
T 3mmy_A          160 SSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR  239 (368)
T ss_dssp             CSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE
T ss_pred             CCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc
Confidence            6543211110                                                                      


Q ss_pred             ------------------cceEe------------ceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEE
Q psy15417        103 ------------------DNIIC------------GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVS  152 (176)
Q Consensus       103 ------------------~~~~~------------~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~  152 (176)
                                        ..+..            .+.+++|+|++.++++|+.|+.|++||+.+++++..+..|...|.
T Consensus       240 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~  319 (368)
T 3mmy_A          240 VAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIS  319 (368)
T ss_dssp             EEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEE
T ss_pred             EEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCce
Confidence                              00011            488999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCEEEEccCCCcEEEe
Q psy15417        153 CLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      +++|+|++.+|++|+.|+..+.|
T Consensus       320 ~~~~s~~g~~l~~~s~d~~~~~~  342 (368)
T 3mmy_A          320 ACCFNHNGNIFAYASSYDWSKGH  342 (368)
T ss_dssp             EEEECTTSSCEEEEECCCSTTCG
T ss_pred             EEEECCCCCeEEEEecccccccc
Confidence            99999999999999988765443

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.6e-27  Score=178.78  Aligned_cols=158  Identities=11%  Similarity=0.155  Sum_probs=129.1

Q ss_pred             CCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         17 SGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        17 ~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+|.+.|.+++|+|  ++.++++|+.||+|++||++++++...+.. |...+++++|+|++.++++|+.|+.|++||+++
T Consensus       122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~  201 (343)
T 3lrv_A          122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS  201 (343)
T ss_dssp             CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred             cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence            35778999999999  999999999999999999999988766644 456899999999999999999999999999998


Q ss_pred             CCee-eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC---CCccE--EEEEEeCCCCEEEEcc
Q psy15417         94 DQEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG---HDNRV--SCLGVTEDGMAVATGS  167 (176)
Q Consensus        94 ~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~---~~~~i--~~~~~~~~~~~l~tg~  167 (176)
                      ++.. ..+.. .+..+|.++.|+|++.++++++.+ .+++||+.+.+....+..   |...+  .+++|+|++.+|++++
T Consensus       202 ~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s  279 (343)
T 3lrv_A          202 PDQASSRFPV-DEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS  279 (343)
T ss_dssp             TTSCCEECCC-CTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred             CCCCccEEec-cCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence            8765 44433 123578999999999999999955 999999988766544433   33333  3699999999999988


Q ss_pred             C-CCcEEEeC
Q psy15417        168 W-DSFLRIWN  176 (176)
Q Consensus       168 ~-d~~v~vwd  176 (176)
                      . |+.+++|+
T Consensus       280 ~~d~~i~v~~  289 (343)
T 3lrv_A          280 NESNSLTIYK  289 (343)
T ss_dssp             TTTTEEEEEE
T ss_pred             CCCCcEEEEE
Confidence            8 99999994

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.96  E-value=2.7e-27  Score=180.53  Aligned_cols=160  Identities=18%  Similarity=0.293  Sum_probs=142.2

Q ss_pred             cCCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEecCC------CCCeeEEEEccCC-cEEEEeeCCC---
Q psy15417         16 ASGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGH------ESDINAVTFFPNG-WAFATGSDDA---   84 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~-~~l~s~s~d~---   84 (176)
                      ..+|...|.+++|+|+ +.+|++++.|+.|++||+++++....+..|      ..+|.+++|+|++ ..+++++.|+   
T Consensus       161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~  240 (416)
T 2pm9_A          161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP  240 (416)
T ss_dssp             SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred             ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence            4679999999999998 789999999999999999999998888876      7899999999996 6899999999   


Q ss_pred             cEEEeeCCCCC-eeeEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC-C
Q psy15417         85 TCRLFDIRADQ-ELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-M  161 (176)
Q Consensus        85 ~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~  161 (176)
                      .|++||+++.. ....+.. .+...+.++.|+| ++.++++++.|+++++||+.+++++..+..|...|.+++|+|++ .
T Consensus       241 ~i~~~d~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~  319 (416)
T 2pm9_A          241 SILIWDLRNANTPLQTLNQ-GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPD  319 (416)
T ss_dssp             CCCEEETTSTTSCSBCCCS-CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTT
T ss_pred             eEEEEeCCCCCCCcEEeec-CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCC
Confidence            99999998753 3333220 2335688999999 89999999999999999999999999999999999999999998 8


Q ss_pred             EEEEccCCCcEEEeC
Q psy15417        162 AVATGSWDSFLRIWN  176 (176)
Q Consensus       162 ~l~tg~~d~~v~vwd  176 (176)
                      +|++++.|+.|++||
T Consensus       320 ~l~s~~~d~~i~iw~  334 (416)
T 2pm9_A          320 LFACASFDNKIEVQT  334 (416)
T ss_dssp             EEEECCSSSEEEEEE
T ss_pred             EEEEEecCCcEEEEE
Confidence            999999999999996

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.96  E-value=5.6e-27  Score=179.20  Aligned_cols=159  Identities=24%  Similarity=0.419  Sum_probs=139.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEee--CCCcEEEeeC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGS--DDATCRLFDI   91 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s--~d~~i~iwd~   91 (176)
                      .+.+|.+.|.+++|+|++.+|++|+.|+.|++||+++++....+..|...|.+++|+|++ ..+++++  .|+.|++||+
T Consensus       212 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~  291 (401)
T 4aez_A          212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA  291 (401)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred             EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence            366899999999999999999999999999999999999999999999999999999975 5666655  7999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEE--EcCCCeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLA--GYDDFNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--g~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      ++++.+..+...   ..+.++.|+|++..+++  |..|+.+++||+..++.  ...+.+|...|.+++|+|++.+|++++
T Consensus       292 ~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~  368 (401)
T 4aez_A          292 ATGARVNTVDAG---SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAA  368 (401)
T ss_dssp             TTCCEEEEEECS---SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEEC
T ss_pred             CCCCEEEEEeCC---CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence            988776665543   35889999999999988  66899999999887544  344678999999999999999999999


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      .|+.|++||
T Consensus       369 ~dg~i~iw~  377 (401)
T 4aez_A          369 SDENLKFWR  377 (401)
T ss_dssp             TTSEEEEEE
T ss_pred             CCCcEEEEE
Confidence            999999996

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.96  E-value=6.1e-27  Score=175.33  Aligned_cols=159  Identities=13%  Similarity=0.201  Sum_probs=137.6

Q ss_pred             cCCCccCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCeeeeEecC-----CCCCeeEEEEccC----CcEEEEeeC
Q psy15417         16 ASGHTGDVMSLSLAPD----MRTFVSGACDASAKLWDIRDGSCKQTFPG-----HESDINAVTFFPN----GWAFATGSD   82 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~----~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-----h~~~v~~v~~~~~----~~~l~s~s~   82 (176)
                      ..+|.+.|.+++|+|+    ...+++++.++.|++||+.+++.+..+..     |...|.+++|+|+    +.+|++++.
T Consensus        14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~   93 (366)
T 3k26_A           14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS   93 (366)
T ss_dssp             ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred             ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence            4589999999999984    45677777788999999998876666553     5578999999999    679999999


Q ss_pred             CCcEEEeeCCCCCeeeEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeee---cCCCccEEEEEEeC
Q psy15417         83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGIL---AGHDNRVSCLGVTE  158 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~---~~~~~~i~~~~~~~  158 (176)
                      |+.|++||+.+++.+..+.  .+...|.++.|+| ++.++++++.|+.|++||+..++....+   ..|...|.+++|+|
T Consensus        94 dg~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~  171 (366)
T 3k26_A           94 RGIIRIINPITMQCIKHYV--GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL  171 (366)
T ss_dssp             TCEEEEECTTTCCEEEEEE--SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred             CCEEEEEEchhceEeeeec--CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence            9999999998877665543  2335789999999 8999999999999999999988888877   68999999999999


Q ss_pred             CCCEEEEccCCCcEEEeC
Q psy15417        159 DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       159 ~~~~l~tg~~d~~v~vwd  176 (176)
                      ++.+|++|+.|+.|++||
T Consensus       172 ~~~~l~~~~~dg~i~i~d  189 (366)
T 3k26_A          172 LGEKIMSCGMDHSLKLWR  189 (366)
T ss_dssp             TSSEEEEEETTSCEEEEE
T ss_pred             CCCEEEEecCCCCEEEEE
Confidence            999999999999999996

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.96  E-value=1.3e-27  Score=178.98  Aligned_cols=157  Identities=17%  Similarity=0.293  Sum_probs=137.5

Q ss_pred             CCccCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCC
Q psy15417         18 GHTGDVMSLSLAPD----MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        18 gh~~~V~~~~~~~~----~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .|.+.|.+++|+|+    +.+|++|+.||.|++||+++++.+..+.+|..+|.+++|+| ++..|++++.|+.|++||++
T Consensus        67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~  146 (366)
T 3k26_A           67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ  146 (366)
T ss_dssp             CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred             CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence            47788999999998    67999999999999999999999999999999999999999 89999999999999999999


Q ss_pred             CCCeeeEEe-ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec--------------------------
Q psy15417         93 ADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA--------------------------  145 (176)
Q Consensus        93 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~--------------------------  145 (176)
                      +++....+. ...+...+.++.|+|++..+++++.|+.+++||+..++....+.                          
T Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (366)
T 3k26_A          147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST  226 (366)
T ss_dssp             TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred             cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence            877665542 12334578999999999999999999999999988765544333                          


Q ss_pred             --CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        146 --GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       146 --~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                        .|...|.+++|+  +.+|++++.|+.|++||
T Consensus       227 ~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd  257 (366)
T 3k26_A          227 RDIHRNYVDCVRWL--GDLILSKSCENAIVCWK  257 (366)
T ss_dssp             CSSCSSCCCEEEEE--TTEEEEECSSSEEEEEE
T ss_pred             ccCCcceEEEEEEc--CCEEEEEecCCEEEEEe
Confidence              388999999998  67999999999999996

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.3e-27  Score=196.03  Aligned_cols=162  Identities=19%  Similarity=0.262  Sum_probs=138.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCeeeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIR--DGSCKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~iwd   90 (176)
                      .+.||.+.|++++|+|++.++++|+.||+|++||+.  +++....+.+|..+|.+++|+|+  +..+++++.||.|++||
T Consensus         4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd   83 (753)
T 3jro_A            4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   83 (753)
T ss_dssp             ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred             ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence            468999999999999999999999999999999998  55678899999999999999988  99999999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCC--CcEEEEEcCCCeEEEEeCCCc--eeeeeecCCCccEEEEEEeC--------
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRS--GRLLLAGYDDFNCNVWDSMKT--ERAGILAGHDNRVSCLGVTE--------  158 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~g~~d~~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~--------  158 (176)
                      ++++..........+...|.++.|+|+  +..+++|+.|+.+++||+...  .......+|...|.+++|+|        
T Consensus        84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~  163 (753)
T 3jro_A           84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE  163 (753)
T ss_dssp             EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred             CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence            987753333333334457899999999  999999999999999998776  33445678899999999999        


Q ss_pred             -----CCCEEEEccCCCcEEEeC
Q psy15417        159 -----DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       159 -----~~~~l~tg~~d~~v~vwd  176 (176)
                           ++.++++|+.|+.|++||
T Consensus       164 ~~~~~d~~~l~sgs~dg~I~iwd  186 (753)
T 3jro_A          164 HNGTKESRKFVTGGADNLVKIWK  186 (753)
T ss_dssp             ---CGGGCCEEEEETTSCEEEEE
T ss_pred             cccCCCCCEEEEEECCCeEEEEe
Confidence                 588999999999999996

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.96  E-value=5.9e-28  Score=201.41  Aligned_cols=162  Identities=14%  Similarity=0.205  Sum_probs=132.8

Q ss_pred             cccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--eEe----c-----CCCCCeeEEEEccCCcEEEEeeC
Q psy15417         14 PAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTF----P-----GHESDINAVTFFPNGWAFATGSD   82 (176)
Q Consensus        14 ~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~----~-----~h~~~v~~v~~~~~~~~l~s~s~   82 (176)
                      ..+.||...+..++|+|++++|++|+.|++|++||+.++...  ..+    .     +|...|.+++|+|++..|++|+.
T Consensus       429 ~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~  508 (902)
T 2oaj_A          429 YLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE  508 (902)
T ss_dssp             CSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred             CcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec
Confidence            356788888888889999999999999999999999887421  111    1     78899999999999999999999


Q ss_pred             CCcEEEeeCCCCCe-------------------------------------------eeEEeecceEeceEEEEECCCCc
Q psy15417         83 DATCRLFDIRADQE-------------------------------------------LAMYSHDNIICGITSVAFSRSGR  119 (176)
Q Consensus        83 d~~i~iwd~~~~~~-------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~  119 (176)
                      |++|++|++.+++.                                           ........+...|.+++|+|+| 
T Consensus       509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-  587 (902)
T 2oaj_A          509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-  587 (902)
T ss_dssp             TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-
T ss_pred             CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-
Confidence            99999999865421                                           0011222344579999999999 


Q ss_pred             EEEEEcCCCeEEEEeCCCceeee-----eec-CCCccEEEEEEe-----CCC---CEEEEccCCCcEEEeC
Q psy15417        120 LLLAGYDDFNCNVWDSMKTERAG-----ILA-GHDNRVSCLGVT-----EDG---MAVATGSWDSFLRIWN  176 (176)
Q Consensus       120 ~l~~g~~d~~i~v~d~~~~~~~~-----~~~-~~~~~i~~~~~~-----~~~---~~l~tg~~d~~v~vwd  176 (176)
                      +|++|+.|++|++||+.....+.     .+. +|...|++++|+     |||   ..|++|+.|++|++||
T Consensus       588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd  658 (902)
T 2oaj_A          588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK  658 (902)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred             EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence            99999999999999987765542     333 889999999999     885   8999999999999996

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.96  E-value=4.9e-27  Score=178.14  Aligned_cols=159  Identities=22%  Similarity=0.363  Sum_probs=139.8

Q ss_pred             ccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEec-------------CCCCCeeEEEEcc-CCcEEEE
Q psy15417         15 AASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFP-------------GHESDINAVTFFP-NGWAFAT   79 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-------------~h~~~v~~v~~~~-~~~~l~s   79 (176)
                      .+.+|.+.|.+++|+| ++.+|++|+.||.|++||+.+++....+.             +|..+|.+++|+| ++..|++
T Consensus        38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s  117 (408)
T 4a11_B           38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS  117 (408)
T ss_dssp             ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred             eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence            4678999999999999 99999999999999999999876555443             5999999999999 7789999


Q ss_pred             eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCC---CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417         80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS---GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV  156 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~  156 (176)
                      ++.|+.|++||+++.+....+....   .+.++.++|.   +.++++++.++.+++||+..++....+..|...|.+++|
T Consensus       118 ~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~  194 (408)
T 4a11_B          118 SSFDKTLKVWDTNTLQTADVFNFEE---TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSW  194 (408)
T ss_dssp             EETTSEEEEEETTTTEEEEEEECSS---CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred             EeCCCeEEEeeCCCCccceeccCCC---ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence            9999999999999887766655443   4667788874   459999999999999999988888889999999999999


Q ss_pred             eCCCC-EEEEccCCCcEEEeC
Q psy15417        157 TEDGM-AVATGSWDSFLRIWN  176 (176)
Q Consensus       157 ~~~~~-~l~tg~~d~~v~vwd  176 (176)
                      +|++. .+++|+.|+.|++||
T Consensus       195 ~~~~~~ll~~~~~dg~i~i~d  215 (408)
T 4a11_B          195 SPRYDYILATASADSRVKLWD  215 (408)
T ss_dssp             CSSCTTEEEEEETTSCEEEEE
T ss_pred             CCCCCcEEEEEcCCCcEEEEE
Confidence            99988 589999999999996

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.5e-27  Score=195.71  Aligned_cols=162  Identities=20%  Similarity=0.314  Sum_probs=142.2

Q ss_pred             ccCCCccCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccC--CcEEEEeeCCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPN--GWAFATGSDDATCRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~--~~~l~s~s~d~~i~i   88 (176)
                      .+.+|.+.|.+++|+|+  +.+|++|+.||+|++||+++++  ....+.+|..+|.+++|+|+  +..+++++.|+.|++
T Consensus        48 ~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v  127 (753)
T 3jro_A           48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV  127 (753)
T ss_dssp             EECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred             eccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE
Confidence            46789999999999988  8999999999999999999987  77888899999999999999  999999999999999


Q ss_pred             eeCCCCCeeeEEeecceEeceEEEEECC-------------CCcEEEEEcCCCeEEEEeCCCc----eeeeeecCCCccE
Q psy15417         89 FDIRADQELAMYSHDNIICGITSVAFSR-------------SGRLLLAGYDDFNCNVWDSMKT----ERAGILAGHDNRV  151 (176)
Q Consensus        89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~g~~d~~i~v~d~~~~----~~~~~~~~~~~~i  151 (176)
                      ||++............+...+.++.|+|             ++..+++|+.|++|++||+...    .....+.+|...|
T Consensus       128 wdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V  207 (753)
T 3jro_A          128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV  207 (753)
T ss_dssp             EECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred             EEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcE
Confidence            9998764433223333345788999999             5889999999999999997665    5566778899999


Q ss_pred             EEEEEeCC---CCEEEEccCCCcEEEeC
Q psy15417        152 SCLGVTED---GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~---~~~l~tg~~d~~v~vwd  176 (176)
                      .+++|+|+   +.+|++|+.|+.|++||
T Consensus       208 ~~l~~sp~~~~~~~l~s~s~Dg~I~iwd  235 (753)
T 3jro_A          208 RDVAWSPTVLLRSYLASVSQDRTCIIWT  235 (753)
T ss_dssp             EEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred             EEEEeccCCCCCCEEEEEecCCEEEEec
Confidence            99999999   89999999999999996

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.95  E-value=6.2e-28  Score=185.82  Aligned_cols=157  Identities=13%  Similarity=0.254  Sum_probs=134.0

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec-CCCCCeeEEEEcc----CCcEEEEeeCCCcEEEeeCCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-GHESDINAVTFFP----NGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~~----~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      |.+.|.+++|+|++.+|++|+.||+|++||+++++++..+. .|..+|.+++++|    ++..+++++.|+.|++||+++
T Consensus       213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~  292 (437)
T 3gre_A          213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK  292 (437)
T ss_dssp             GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence            89999999999999999999999999999999999998886 7888999996664    578999999999999999988


Q ss_pred             CCeeeEEeec------------------------ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC---
Q psy15417         94 DQELAMYSHD------------------------NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG---  146 (176)
Q Consensus        94 ~~~~~~~~~~------------------------~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~---  146 (176)
                      ++.+..+...                        .+...|.+++|+ ++.++++|+.|+.|++||+.+++....+.+   
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~  371 (437)
T 3gre_A          293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSR  371 (437)
T ss_dssp             TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred             CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence            7765444311                        022347888999 779999999999999999988776665554   


Q ss_pred             ----------------------------------CCccEEEEEEeCC--CCEEEEccCCCcEEEeC
Q psy15417        147 ----------------------------------HDNRVSCLGVTED--GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       147 ----------------------------------~~~~i~~~~~~~~--~~~l~tg~~d~~v~vwd  176 (176)
                                                        |...|.+++|.++  +.+|++|+.||.|+||+
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          372 FSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             cCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence                                              7889999999987  77999999999999996

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.95  E-value=2.7e-27  Score=183.49  Aligned_cols=160  Identities=14%  Similarity=0.116  Sum_probs=137.3

Q ss_pred             cCCCccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcC--CCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         16 ASGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIR--DGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~--~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      .++|.+.|.+++|+|++++| ++|+.||.|++||+.  ++++...+.  .|...|++++|+|++.+|++++.++.+++|+
T Consensus        98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~  177 (450)
T 2vdu_B           98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID  177 (450)
T ss_dssp             --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence            45788899999999999986 899999999999999  888888776  5678999999999999999999999999999


Q ss_pred             CCCCCeee--EEeecceEeceEEEEECCC---CcEEEEEcCCCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCCCEEE
Q psy15417         91 IRADQELA--MYSHDNIICGITSVAFSRS---GRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        91 ~~~~~~~~--~~~~~~~~~~v~~~~~~~~---~~~l~~g~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      +.+.....  ......+...+.++.|+|+   +.++++|+.|++|++||+..++.+.. +.+|...|.+++|+ ++.+|+
T Consensus       178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~  256 (450)
T 2vdu_B          178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLL  256 (450)
T ss_dssp             TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEE
T ss_pred             cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEE
Confidence            97765432  1111222346889999999   99999999999999999988877766 56899999999999 999999


Q ss_pred             EccCCCcEEEeC
Q psy15417        165 TGSWDSFLRIWN  176 (176)
Q Consensus       165 tg~~d~~v~vwd  176 (176)
                      +|+.|++|++||
T Consensus       257 s~~~d~~v~vwd  268 (450)
T 2vdu_B          257 SAGGDDKIFAWD  268 (450)
T ss_dssp             EEESSSEEEEEE
T ss_pred             EEeCCCeEEEEE
Confidence            999999999996

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.95  E-value=3e-27  Score=180.75  Aligned_cols=157  Identities=18%  Similarity=0.272  Sum_probs=134.3

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      .+| ..+....|++++.+|++|+.||.|++||+++++....+.+|...|++++|+|++.+|++++.|+.|++||+++++.
T Consensus        95 ~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~  173 (420)
T 3vl1_A           95 KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN  173 (420)
T ss_dssp             CSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC
T ss_pred             ecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC
Confidence            344 4445557899999999999999999999999999888899999999999999999999999999999999988776


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC---CCccEEEEEE-----------------
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG---HDNRVSCLGV-----------------  156 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~---~~~~i~~~~~-----------------  156 (176)
                      +..+.  .+...|.+++|+|++..+++++.|+++++||+.+++....+..   |...+.++++                 
T Consensus       174 ~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~  251 (420)
T 3vl1_A          174 PRTLI--GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN  251 (420)
T ss_dssp             CEEEE--CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred             ceEEc--CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence            65543  2335688999999999999999999999999998888877764   3445555554                 


Q ss_pred             ----eCCCCEEEEccCCCcEEEeC
Q psy15417        157 ----TEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       157 ----~~~~~~l~tg~~d~~v~vwd  176 (176)
                          +|++.+|++|+.|+.|++||
T Consensus       252 ~~~~s~~~~~l~~~~~dg~i~i~d  275 (420)
T 3vl1_A          252 NLEFGTYGKYVIAGHVSGVITVHN  275 (420)
T ss_dssp             TTCSSCTTEEEEEEETTSCEEEEE
T ss_pred             ceEEcCCCCEEEEEcCCCeEEEEE
Confidence                68899999999999999996

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.95  E-value=4.2e-27  Score=179.47  Aligned_cols=161  Identities=14%  Similarity=0.220  Sum_probs=139.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC----CeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEee
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD----GSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFD   90 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~----~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd   90 (176)
                      ..+|...|.+++|+|++.+|++|+.||.|++||+.+    .+....+.+|..+|++++|+|+ +.+|++++.|+.|++||
T Consensus        63 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  142 (416)
T 2pm9_A           63 SLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD  142 (416)
T ss_dssp             CCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred             EEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence            346899999999999999999999999999999987    4578889999999999999998 89999999999999999


Q ss_pred             CCCCC------eeeEE-eecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCC------CccEEEEEE
Q psy15417         91 IRADQ------ELAMY-SHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGH------DNRVSCLGV  156 (176)
Q Consensus        91 ~~~~~------~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~------~~~i~~~~~  156 (176)
                      +++.+      ..... ....+...+.+++|+|+ +.++++++.|+.+++||+..++....+..+      ...+.+++|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~  222 (416)
T 2pm9_A          143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEW  222 (416)
T ss_dssp             TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEE
T ss_pred             CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEE
Confidence            98765      22211 11223356889999999 789999999999999999988888877766      778999999


Q ss_pred             eCCC-CEEEEccCCC---cEEEeC
Q psy15417        157 TEDG-MAVATGSWDS---FLRIWN  176 (176)
Q Consensus       157 ~~~~-~~l~tg~~d~---~v~vwd  176 (176)
                      +|++ .++++++.|+   .|++||
T Consensus       223 ~~~~~~~l~~~~~d~~~~~i~~~d  246 (416)
T 2pm9_A          223 HPKNSTRVATATGSDNDPSILIWD  246 (416)
T ss_dssp             CSSCTTEEEEEECCSSSCCCCEEE
T ss_pred             CCCCCCEEEEEECCCCCceEEEEe
Confidence            9997 6899999999   999996

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.95  E-value=1.1e-26  Score=179.22  Aligned_cols=162  Identities=20%  Similarity=0.361  Sum_probs=138.3

Q ss_pred             CcccCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCee-------eeEecCCCCCeeEEEEcc-CCcEEEEeeCC
Q psy15417         13 SPAASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSC-------KQTFPGHESDINAVTFFP-NGWAFATGSDD   83 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~-------~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d   83 (176)
                      ...+.+|...|.+++|+|++. +|++|+.||.|++||++++..       ...+.+|...|.+++|+| ++..|++++.|
T Consensus       174 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d  253 (430)
T 2xyi_A          174 DLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD  253 (430)
T ss_dssp             SEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT
T ss_pred             cEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC
Confidence            334678999999999999988 999999999999999987432       456778999999999999 67899999999


Q ss_pred             CcEEEeeCCCCC---eeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeC
Q psy15417         84 ATCRLFDIRADQ---ELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTE  158 (176)
Q Consensus        84 ~~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~  158 (176)
                      +.|++||+++..   ......  .+...+++++|+|++. ++++|+.|+.|++||+.. ..++..+..|...|.+++|+|
T Consensus       254 g~i~i~d~~~~~~~~~~~~~~--~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp  331 (430)
T 2xyi_A          254 QKLMIWDTRNNNTSKPSHTVD--AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP  331 (430)
T ss_dssp             SEEEEEETTCSCSSSCSEEEE--CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECS
T ss_pred             CeEEEEECCCCCCCcceeEee--cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECC
Confidence            999999998763   333322  2335689999999987 788999999999999887 566778888999999999999


Q ss_pred             CCC-EEEEccCCCcEEEeC
Q psy15417        159 DGM-AVATGSWDSFLRIWN  176 (176)
Q Consensus       159 ~~~-~l~tg~~d~~v~vwd  176 (176)
                      ++. +|++++.|+.|++||
T Consensus       332 ~~~~~l~s~~~d~~i~iwd  350 (430)
T 2xyi_A          332 HNETILASSGTDRRLHVWD  350 (430)
T ss_dssp             SCTTEEEEEETTSCCEEEE
T ss_pred             CCCCEEEEEeCCCcEEEEe
Confidence            984 689999999999996

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.95  E-value=3.9e-26  Score=173.88  Aligned_cols=157  Identities=19%  Similarity=0.341  Sum_probs=137.9

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      +|.+.|.+++|+|++.+|++++.||.|++|| .+++....+.+|..+|.+++|+|++..|++++.|+.+++||+++++.+
T Consensus       106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  184 (425)
T 1r5m_A          106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM  184 (425)
T ss_dssp             --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred             CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence            4788999999999999999999999999999 677888899999999999999999999999999999999999766543


Q ss_pred             eEEee------------------------------------------------------cceEeceEEEEECCCCcEEEE
Q psy15417         98 AMYSH------------------------------------------------------DNIICGITSVAFSRSGRLLLA  123 (176)
Q Consensus        98 ~~~~~------------------------------------------------------~~~~~~v~~~~~~~~~~~l~~  123 (176)
                      ..+..                                                      ..+...+.++.|+|++.++++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  264 (425)
T 1r5m_A          185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLS  264 (425)
T ss_dssp             EEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred             EEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEE
Confidence            32211                                                      011235789999999999999


Q ss_pred             EcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        124 GYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       124 g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++.|+.+++||+..++....+..|...+.+++|+|++ .+++++.|+.|++||
T Consensus       265 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d  316 (425)
T 1r5m_A          265 ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWS  316 (425)
T ss_dssp             EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEE
T ss_pred             EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEE
Confidence            9999999999999888888888899999999999999 999999999999996

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.95  E-value=3e-26  Score=175.16  Aligned_cols=155  Identities=18%  Similarity=0.322  Sum_probs=136.5

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe-
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE-   96 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~-   96 (176)
                      .|.+.|.+++|+|++.+|++|+.||.|++||+.+++....+.+|...|.+++|  ++..+++++.|+.|++||++.... 
T Consensus       132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~  209 (401)
T 4aez_A          132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQ  209 (401)
T ss_dssp             CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE
T ss_pred             CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcce
Confidence            48899999999999999999999999999999999999999999999999999  567999999999999999985433 


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC-CEEEEcc--CCCcEE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG-MAVATGS--WDSFLR  173 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~tg~--~d~~v~  173 (176)
                      ...+  ..+...+.++.|+|++.++++|+.|+.+++||+..++....+..|...|.+++|+|++ ..+++|+  .|+.|+
T Consensus       210 ~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~  287 (401)
T 4aez_A          210 IGTL--QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH  287 (401)
T ss_dssp             EEEE--ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred             eeEE--cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence            3332  2233578899999999999999999999999999888888888999999999999975 5666654  899999


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      +||
T Consensus       288 i~d  290 (401)
T 4aez_A          288 FWN  290 (401)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            996

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.95  E-value=9.7e-27  Score=179.08  Aligned_cols=154  Identities=14%  Similarity=0.293  Sum_probs=128.4

Q ss_pred             cCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCeee---------------------------------------eE-e
Q psy15417         21 GDVMSLSLAPDM--RTFVSGACDASAKLWDIRDGSCK---------------------------------------QT-F   58 (176)
Q Consensus        21 ~~V~~~~~~~~~--~~l~s~s~dg~v~~wd~~~~~~~---------------------------------------~~-~   58 (176)
                      +.|.+++|+|++  ..|++++.|++|++||+.+++..                                       .. .
T Consensus        94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (447)
T 3dw8_B           94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA  173 (447)
T ss_dssp             CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred             CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence            889999999998  79999999999999999764432                                       12 3


Q ss_pred             cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC-eeeEE-----eecceEeceEEEEECCCC-cEEEEEcCCCeEE
Q psy15417         59 PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMY-----SHDNIICGITSVAFSRSG-RLLLAGYDDFNCN  131 (176)
Q Consensus        59 ~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~-----~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~  131 (176)
                      .+|...|.+++|+|+++.|+++ .|+.|++||++... .....     ....+...+.+++|+|++ .++++|+.|++|+
T Consensus       174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~  252 (447)
T 3dw8_B          174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR  252 (447)
T ss_dssp             SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred             cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence            6799999999999999999998 79999999998432 22222     122344568999999998 8999999999999


Q ss_pred             EEeCCCcee----eeeecCCCc------------cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        132 VWDSMKTER----AGILAGHDN------------RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       132 v~d~~~~~~----~~~~~~~~~------------~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +||+..++.    ...+..|..            .|.+++|+|++.+|++++. +.|++||
T Consensus       253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd  312 (447)
T 3dw8_B          253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWD  312 (447)
T ss_dssp             EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEE
T ss_pred             EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEe
Confidence            999888775    667777775            8999999999999999999 9999996

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.95  E-value=1.1e-26  Score=173.65  Aligned_cols=159  Identities=20%  Similarity=0.251  Sum_probs=135.3

Q ss_pred             ccCCCccCeEEEEE------cCCCCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCC----CeeEEE----EccCCcEEEE
Q psy15417         15 AASGHTGDVMSLSL------APDMRTFVSGACDASAKLWDIRDGS-CKQTFPGHES----DINAVT----FFPNGWAFAT   79 (176)
Q Consensus        15 ~~~gh~~~V~~~~~------~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~----~v~~v~----~~~~~~~l~s   79 (176)
                      .+.+|.+.|.+++|      +|++.+|++++.||.|++||+++++ ....+..|.+    .+.+++    |+|++..+++
T Consensus       106 ~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~  185 (357)
T 3i2n_A          106 SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCA  185 (357)
T ss_dssp             EECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred             EEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEE
Confidence            46789999999955      6889999999999999999999887 6777876654    788998    6789999999


Q ss_pred             eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC---CCcEEEEEcCCCeEEEEeCCCceeeeeec-----CCCccE
Q psy15417         80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR---SGRLLLAGYDDFNCNVWDSMKTERAGILA-----GHDNRV  151 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-----~~~~~i  151 (176)
                      ++.|+.|++||+++.+......+.   ..+.++.|+|   ++..+++++.|+.+++||+...+....+.     +|...|
T Consensus       186 ~~~d~~i~i~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v  262 (357)
T 3i2n_A          186 GYDNGDIKLFDLRNMALRWETNIK---NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTV  262 (357)
T ss_dssp             EETTSEEEEEETTTTEEEEEEECS---SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCE
T ss_pred             EccCCeEEEEECccCceeeecCCC---CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCE
Confidence            999999999999987764443333   4688999999   89999999999999999987766555444     899999


Q ss_pred             EEEEEeCCCC-EEEEccCCCcEEEeC
Q psy15417        152 SCLGVTEDGM-AVATGSWDSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~~~-~l~tg~~d~~v~vwd  176 (176)
                      .+++|+|++. +|++|+.|+.|++||
T Consensus       263 ~~~~~~~~~~~~l~~~~~dg~i~iwd  288 (357)
T 3i2n_A          263 WQVRHLPQNRELFLTAGGAGGLHLWK  288 (357)
T ss_dssp             EEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred             EEEEECCCCCcEEEEEeCCCcEEEee
Confidence            9999999988 899999999999996

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.95  E-value=3.7e-27  Score=178.90  Aligned_cols=161  Identities=9%  Similarity=0.064  Sum_probs=139.2

Q ss_pred             ccCCCccCeEEEEEcCC----C---CEEEEEeCCCeEEEEEcCCCee-----eeEecCC-----CCCeeEEEEc----cC
Q psy15417         15 AASGHTGDVMSLSLAPD----M---RTFVSGACDASAKLWDIRDGSC-----KQTFPGH-----ESDINAVTFF----PN   73 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~----~---~~l~s~s~dg~v~~wd~~~~~~-----~~~~~~h-----~~~v~~v~~~----~~   73 (176)
                      .+.+|...|.+++|+|+    +   .+|++++.||.|++||+.+++.     ...+..|     ...|.+++|+    |+
T Consensus        57 ~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  136 (397)
T 1sq9_A           57 SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL  136 (397)
T ss_dssp             EEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC---
T ss_pred             EEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC
Confidence            45689999999999999    9   9999999999999999998887     8888888     5899999999    99


Q ss_pred             CcE-EEEeeCCCcEEEeeCCC------CCeee-----EEee-----cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC
Q psy15417         74 GWA-FATGSDDATCRLFDIRA------DQELA-----MYSH-----DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM  136 (176)
Q Consensus        74 ~~~-l~s~s~d~~i~iwd~~~------~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~  136 (176)
                      +.. |++++.|+.|++||++.      .+.+.     .+..     ..+...+.++.|+|++ .+++++.|+.+++||+.
T Consensus       137 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~  215 (397)
T 1sq9_A          137 LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS  215 (397)
T ss_dssp             -CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT
T ss_pred             CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC
Confidence            999 99999999999999987      54443     3321     2233568899999999 99999999999999999


Q ss_pred             CceeeeeecC---C---CccEEEEEEeCCCCEEEEccCC---CcEEEeC
Q psy15417        137 KTERAGILAG---H---DNRVSCLGVTEDGMAVATGSWD---SFLRIWN  176 (176)
Q Consensus       137 ~~~~~~~~~~---~---~~~i~~~~~~~~~~~l~tg~~d---~~v~vwd  176 (176)
                      ..+.+..+..   |   ...+.+++|+|++.+|++++.|   +.|++||
T Consensus       216 ~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d  264 (397)
T 1sq9_A          216 TLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE  264 (397)
T ss_dssp             TTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred             CCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEE
Confidence            8988888888   8   8999999999999999999999   9999996

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.95  E-value=2.7e-26  Score=188.36  Aligned_cols=161  Identities=25%  Similarity=0.425  Sum_probs=144.8

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-eeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-SCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|.+.|.+++|+|++.+|++++.||+|++||++++ .....+.+|..+|.+++|+| ++..+++++.|+.|++||++
T Consensus        92 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~  171 (814)
T 3mkq_A           92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG  171 (814)
T ss_dssp             EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred             EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence            35789999999999999999999999999999999987 77888999999999999999 88999999999999999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECC--CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSR--SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      ++.......... ...+..+.|+|  ++.++++++.|+.+++||...++....+.+|...+.+++|+|++.+|++|+.|+
T Consensus       172 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  250 (814)
T 3mkq_A          172 QSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG  250 (814)
T ss_dssp             CSSCSEEEECCC-TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred             CCcceeEEecCC-CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence            776554433221 13577899999  899999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      .|++||
T Consensus       251 ~v~vwd  256 (814)
T 3mkq_A          251 TLKIWN  256 (814)
T ss_dssp             CEEEEE
T ss_pred             eEEEEE
Confidence            999996

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.95  E-value=7.7e-26  Score=174.59  Aligned_cols=160  Identities=27%  Similarity=0.382  Sum_probs=137.7

Q ss_pred             ccCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC---eeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEe
Q psy15417         15 AASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDG---SCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLF   89 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iw   89 (176)
                      .+.+|...|.+++|+| ++.+|++++.||.|++||++++   +....+..|...|++++|+|++. .+++++.|+.|++|
T Consensus       226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw  305 (430)
T 2xyi_A          226 IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW  305 (430)
T ss_dssp             EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred             eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence            4668999999999999 6789999999999999999987   56778889999999999999886 79999999999999


Q ss_pred             eCCCC-CeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCC--------------ceeeeeecCCCccEEE
Q psy15417         90 DIRAD-QELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMK--------------TERAGILAGHDNRVSC  153 (176)
Q Consensus        90 d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~--------------~~~~~~~~~~~~~i~~  153 (176)
                      |++.. +.+..+.  .+...+.++.|+|++. ++++++.|+.|++||+..              .+.+..+.+|...|.+
T Consensus       306 d~~~~~~~~~~~~--~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~  383 (430)
T 2xyi_A          306 DLRNLKLKLHSFE--SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD  383 (430)
T ss_dssp             ETTCTTSCSEEEE--CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE
T ss_pred             eCCCCCCCeEEee--cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE
Confidence            99874 3344433  2234688999999985 789999999999999865              2556677789999999


Q ss_pred             EEEeCCCC-EEEEccCCCcEEEeC
Q psy15417        154 LGVTEDGM-AVATGSWDSFLRIWN  176 (176)
Q Consensus       154 ~~~~~~~~-~l~tg~~d~~v~vwd  176 (176)
                      ++|+|++. +|++++.|+.|++|+
T Consensus       384 ~~~~p~~~~~l~s~s~dg~i~iw~  407 (430)
T 2xyi_A          384 FSWNPNEPWIICSVSEDNIMQVWQ  407 (430)
T ss_dssp             EEECSSSTTEEEEEETTSEEEEEE
T ss_pred             EEECCCCCCEEEEEECCCCEEEeE
Confidence            99999998 899999999999995

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.95  E-value=7.1e-27  Score=175.27  Aligned_cols=152  Identities=11%  Similarity=0.037  Sum_probs=126.0

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcC---------CCeeeeEec-CCCCCeeEEEEcc--CCcEEEEeeCCCcEE
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIR---------DGSCKQTFP-GHESDINAVTFFP--NGWAFATGSDDATCR   87 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~---------~~~~~~~~~-~h~~~v~~v~~~~--~~~~l~s~s~d~~i~   87 (176)
                      ...|.++.|+|+   +++++.|++|++|+..         +++.+..+. +|..+|.+++|+|  ++.++++++.|++|+
T Consensus        76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~  152 (343)
T 3lrv_A           76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIG  152 (343)
T ss_dssp             EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEE
T ss_pred             cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEE
Confidence            356667778877   9999999999999665         444444443 6778999999999  999999999999999


Q ss_pred             EeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee-eeecC-CCccEEEEEEeCCCCEEEE
Q psy15417         88 LFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA-GILAG-HDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        88 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~t  165 (176)
                      +||+++++........ ....+.+++|+|++.++++|+.|+.|++||+.+++.. ..+.. |...|.+++|+|++.+|++
T Consensus       153 ~wd~~~~~~~~~~~~~-~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s  231 (343)
T 3lrv_A          153 FQSYEDDSQYIVHSAK-SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVV  231 (343)
T ss_dssp             EEESSSSCEEEEECCC-SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEE
T ss_pred             EEECCCCcEEEEEecC-CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEE
Confidence            9999987765443222 2235889999999999999999999999999888776 66777 9999999999999999999


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      ++.+ .|++||
T Consensus       232 ~~~~-~v~iwd  241 (343)
T 3lrv_A          232 ECDQ-TVVCFD  241 (343)
T ss_dssp             EESS-BEEEEE
T ss_pred             EeCC-eEEEEE
Confidence            9955 999997

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.95  E-value=2.2e-26  Score=191.99  Aligned_cols=155  Identities=12%  Similarity=0.079  Sum_probs=135.8

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..||.+.|++++|+|++.+|++|+.||+|++||..+.++...+. |..+|.+++|+| +.+|++++.|++|++||+++++
T Consensus        13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~   90 (902)
T 2oaj_A           13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK   90 (902)
T ss_dssp             EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred             ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence            45899999999999999999999999999999998887666554 788999999999 8899999999999999999887


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee-----------eeecCCCccEEEEEEeCC-CCEE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA-----------GILAGHDNRVSCLGVTED-GMAV  163 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~-----------~~~~~~~~~i~~~~~~~~-~~~l  163 (176)
                      .+..+.+.   ..|.+++|+|++.++++|+.|++|++||+..++..           ....+|...|.+++|+|+ +..+
T Consensus        91 ~~~~~~~~---~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l  167 (902)
T 2oaj_A           91 VLTTVFVP---GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV  167 (902)
T ss_dssp             EEEEEECS---SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred             EEEEEcCC---CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence            76665433   36889999999999999999999999998877653           234578899999999996 4689


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      ++|+.|+.| +||
T Consensus       168 ~~g~~dg~v-lWd  179 (902)
T 2oaj_A          168 LISYEYVTL-TYS  179 (902)
T ss_dssp             EEECSSCEE-EEE
T ss_pred             EEEeCCCcE-EEE
Confidence            999999999 996

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.95  E-value=1.1e-26  Score=183.80  Aligned_cols=158  Identities=13%  Similarity=0.043  Sum_probs=130.2

Q ss_pred             cCCCccCeEEEEEcCC------CCEEEEEeCCCeEEEEEcCCCee-----------eeEecCCCCCeeEEEEccCCcEEE
Q psy15417         16 ASGHTGDVMSLSLAPD------MRTFVSGACDASAKLWDIRDGSC-----------KQTFPGHESDINAVTFFPNGWAFA   78 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~------~~~l~s~s~dg~v~~wd~~~~~~-----------~~~~~~h~~~v~~v~~~~~~~~l~   78 (176)
                      +.+|.+.|.+++|+|+      +.+|++++.||+|++||+.+++.           ..++.+|..+|++++|+|++ .|+
T Consensus       203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~la  281 (524)
T 2j04_B          203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVV  281 (524)
T ss_dssp             EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEE
T ss_pred             EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEE
Confidence            4567899999999996      57999999999999999987642           24778899999999999865 799


Q ss_pred             EeeCCCcEEEeeCCCCCee-eEEeecceEeceEEE--EECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCc--cEE
Q psy15417         79 TGSDDATCRLFDIRADQEL-AMYSHDNIICGITSV--AFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDN--RVS  152 (176)
Q Consensus        79 s~s~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~--~i~  152 (176)
                      +|+.||+|++||++++... ..+.  .+...|.++  .|+|++ .+|++|+.|+++++||+...+....+.+|..  .+.
T Consensus       282 sgs~DgtV~lWD~~~~~~~~~~~~--~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~  359 (524)
T 2j04_B          282 CGFKNGFVAEFDLTDPEVPSFYDQ--VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV  359 (524)
T ss_dssp             EEETTSEEEEEETTBCSSCSEEEE--CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred             EEeCCCEEEEEECCCCCCceEEee--cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence            9999999999999865332 2222  223467888  578887 8999999999999999887776666666653  478


Q ss_pred             EEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        153 CLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +++|+|++..+++++.|++|++||
T Consensus       360 ~v~fsp~~~~l~s~~~d~tv~lwd  383 (524)
T 2j04_B          360 PVVYCPQIYSYIYSDGASSLRAVP  383 (524)
T ss_dssp             CEEEETTTTEEEEECSSSEEEEEE
T ss_pred             ceEeCCCcCeEEEeCCCCcEEEEE
Confidence            899999999999999999999996

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.95  E-value=9.5e-26  Score=165.68  Aligned_cols=157  Identities=19%  Similarity=0.234  Sum_probs=136.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|.+.|.+++| +++.+|++|+.||.|++||+.+++....+..|...|.+++|+|++..+++++.|+.+++|++...
T Consensus        13 ~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~   91 (313)
T 3odt_A           13 TLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT   91 (313)
T ss_dssp             EECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC
T ss_pred             HhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec
Confidence            46899999999999 99999999999999999999999999999999999999999999999999999999999998754


Q ss_pred             Cee-eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC-CCCEEEEccCCCcE
Q psy15417         95 QEL-AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-DGMAVATGSWDSFL  172 (176)
Q Consensus        95 ~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~tg~~d~~v  172 (176)
                      ... .......+...+.++.|  ++..+++++.|+.+++||  ..+....+..|...+.++++.| ++..+++++.|+.|
T Consensus        92 ~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i  167 (313)
T 3odt_A           92 SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTI  167 (313)
T ss_dssp             TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred             CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence            321 11222333356788888  567999999999999999  6677778888999999999988 89999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       168 ~i~d  171 (313)
T 3odt_A          168 KLWQ  171 (313)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9996

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.95  E-value=5e-27  Score=179.46  Aligned_cols=162  Identities=16%  Similarity=0.187  Sum_probs=115.5

Q ss_pred             ccCCCccCeEEEEEcC--------CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCc
Q psy15417         15 AASGHTGDVMSLSLAP--------DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDAT   85 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~--------~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~   85 (176)
                      .+.||.+.|++++|+|        |+++|++|+.|++|++||++++.....+.+|..+|.+++|+|++ .+|++++.|++
T Consensus       131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~  210 (393)
T 4gq1_A          131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN  210 (393)
T ss_dssp             TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred             ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCE
Confidence            4789999999999998        78999999999999999999988888888899999999999986 58999999999


Q ss_pred             EEEeeCCCCCeeeEEee-----------------------cceEeceEEEEEC-CCCcEEEEEcCCCeEEEEeCCCceee
Q psy15417         86 CRLFDIRADQELAMYSH-----------------------DNIICGITSVAFS-RSGRLLLAGYDDFNCNVWDSMKTERA  141 (176)
Q Consensus        86 i~iwd~~~~~~~~~~~~-----------------------~~~~~~v~~~~~~-~~~~~l~~g~~d~~i~v~d~~~~~~~  141 (176)
                      |++||+++++.......                       ..+...+.++.|. |++..+++++.|+++++||+..++..
T Consensus       211 v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~  290 (393)
T 4gq1_A          211 IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY  290 (393)
T ss_dssp             EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------
T ss_pred             EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC
Confidence            99999987654321110                       0111245567775 79999999999999999998777665


Q ss_pred             eeecCCCccEEEEEE------------------eC--CCCEEEEccCCCcEEEeC
Q psy15417        142 GILAGHDNRVSCLGV------------------TE--DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       142 ~~~~~~~~~i~~~~~------------------~~--~~~~l~tg~~d~~v~vwd  176 (176)
                      ..+..|...+..+.+                  .|  ++.++++|+.|++|++||
T Consensus       291 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd  345 (393)
T 4gq1_A          291 NEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLIN  345 (393)
T ss_dssp             -------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEE
T ss_pred             ceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEE
Confidence            555555444433333                  22  344678899999999996

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.95  E-value=2.3e-25  Score=163.61  Aligned_cols=154  Identities=18%  Similarity=0.374  Sum_probs=136.4

Q ss_pred             cCCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         16 ASGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      +.+|...|.++.|+| ++.++++++.||.+++||  ..+....+.. |...+.+++|+|++. +++++.|+.|++||+++
T Consensus       138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~  214 (313)
T 3odt_A          138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT  214 (313)
T ss_dssp             EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT
T ss_pred             cccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc
Confidence            467999999999988 899999999999999999  4566777777 899999999999998 99999999999999998


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      ++.+..+.  .+...+.+++|+|++ .+++++.|+.+++||+.+++....+..|...+.+++|+|++. +++++.|+.|+
T Consensus       215 ~~~~~~~~--~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~  290 (313)
T 3odt_A          215 GDVLRTYE--GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVR  290 (313)
T ss_dssp             CCEEEEEE--CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEE
T ss_pred             hhhhhhhh--cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEE
Confidence            87765543  223468899999999 588999999999999999999999999999999999999998 56789999999


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      +||
T Consensus       291 iw~  293 (313)
T 3odt_A          291 IFS  293 (313)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            996

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.95  E-value=4.7e-26  Score=170.11  Aligned_cols=159  Identities=18%  Similarity=0.246  Sum_probs=134.8

Q ss_pred             CCCccCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCe-eeeEecCCCCCeeEEEE------ccCCcEEEEeeCCCcE
Q psy15417         17 SGHTGDVMSLSLAPD---MRTFVSGACDASAKLWDIRDGS-CKQTFPGHESDINAVTF------FPNGWAFATGSDDATC   86 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~---~~~l~s~s~dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~------~~~~~~l~s~s~d~~i   86 (176)
                      .+|...|.+++|+|+   +.+|++|+.||.|++||+++++ ....+.+|...|.+++|      +|++..|++++.|+.|
T Consensus        62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i  141 (357)
T 3i2n_A           62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV  141 (357)
T ss_dssp             EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred             ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence            379999999999998   6999999999999999999988 88899999999999955      6789999999999999


Q ss_pred             EEeeCCCCC-eeeEEee-cc-eEeceEEEE----ECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeC-
Q psy15417         87 RLFDIRADQ-ELAMYSH-DN-IICGITSVA----FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE-  158 (176)
Q Consensus        87 ~iwd~~~~~-~~~~~~~-~~-~~~~v~~~~----~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-  158 (176)
                      ++||+++++ ....+.. .. ....+.++.    |+|++.++++++.|+.+++||+..++... ...|...+.+++|+| 
T Consensus       142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~  220 (357)
T 3i2n_A          142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRK  220 (357)
T ss_dssp             EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCS
T ss_pred             EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCC
Confidence            999998775 3444322 21 123566777    78999999999999999999998877644 356888999999999 


Q ss_pred             --CCCEEEEccCCCcEEEeC
Q psy15417        159 --DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       159 --~~~~l~tg~~d~~v~vwd  176 (176)
                        ++.+|++|+.|+.|++||
T Consensus       221 ~~~~~~l~~~~~dg~i~i~d  240 (357)
T 3i2n_A          221 DISMNKLVATSLEGKFHVFD  240 (357)
T ss_dssp             SSSCCEEEEEESTTEEEEEE
T ss_pred             CCCCCEEEEECCCCeEEEEe
Confidence              899999999999999996

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.94  E-value=6.8e-26  Score=178.42  Aligned_cols=151  Identities=9%  Similarity=0.107  Sum_probs=125.1

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC-----CeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-----DINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~-----~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      +|+..|.+++|||+|+.|++++.||+|++||.++  +...+. |..     .|.+++|+|+|+.|++|+.||+|++||+.
T Consensus        83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~  159 (588)
T 2j04_A           83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR  159 (588)
T ss_dssp             SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence            6788999999999999999999999999999654  666677 665     49999999999999999999999999998


Q ss_pred             CCCe-------eeEEe--ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee---eeee-cCCCccEEEEEEeCC
Q psy15417         93 ADQE-------LAMYS--HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER---AGIL-AGHDNRVSCLGVTED  159 (176)
Q Consensus        93 ~~~~-------~~~~~--~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~---~~~~-~~~~~~i~~~~~~~~  159 (176)
                      ++..       +..+.  ...+...|.+++|+|++  +++++.|+++++||+..++.   ..++ .+|...|.+++|+  
T Consensus       160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--  235 (588)
T 2j04_A          160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--  235 (588)
T ss_dssp             CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--
T ss_pred             CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--
Confidence            7642       22221  13344579999999999  78888999999999877653   2345 4788899999999  


Q ss_pred             CCEEEEccCCCcEEEeC
Q psy15417        160 GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       160 ~~~l~tg~~d~~v~vwd  176 (176)
                      +..||+++ +++|++||
T Consensus       236 g~~LASa~-~~tIkLWd  251 (588)
T 2j04_A          236 DYKVVLTC-PGYVHKID  251 (588)
T ss_dssp             TTEEEEEC-SSEEEEEE
T ss_pred             CCEEEEEe-CCeEEEEE
Confidence            58999887 69999996

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.94  E-value=3.3e-26  Score=170.33  Aligned_cols=158  Identities=11%  Similarity=0.092  Sum_probs=134.8

Q ss_pred             ccCC--CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC---------CeeeeEecCCCCCeeEEEEccCCcEEEEeeCC
Q psy15417         15 AASG--HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD---------GSCKQTFPGHESDINAVTFFPNGWAFATGSDD   83 (176)
Q Consensus        15 ~~~g--h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~---------~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d   83 (176)
                      .+.+  |...|.+++|+| +.++++++.|+.|++||+++         ++++..+. |...|.+++|+|++  +++++.|
T Consensus        94 ~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d  169 (342)
T 1yfq_A           94 ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNN  169 (342)
T ss_dssp             ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEEST
T ss_pred             eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCC
Confidence            4567  999999999999 99999999999999999987         77677776 88999999999887  9999999


Q ss_pred             CcEEEeeCCC-CCeeeEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCc------eeeeeecCCCc------
Q psy15417         84 ATCRLFDIRA-DQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKT------ERAGILAGHDN------  149 (176)
Q Consensus        84 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~------~~~~~~~~~~~------  149 (176)
                      +.|++||+++ ...........+...+.++.|+| ++.++++++.++.+++|+....      +....+..|..      
T Consensus       170 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (342)
T 1yfq_A          170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN  249 (342)
T ss_dssp             TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCS
T ss_pred             CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccc
Confidence            9999999987 54322222222234688999999 9999999999999999998776      66667777755      


Q ss_pred             ---cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        150 ---RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       150 ---~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                         .|.+++|+|++.+|++|+.|+.|++||
T Consensus       250 ~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd  279 (342)
T 1yfq_A          250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWN  279 (342)
T ss_dssp             SCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred             cceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence               899999999999999999999999996

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.94  E-value=2.5e-25  Score=167.96  Aligned_cols=160  Identities=10%  Similarity=0.074  Sum_probs=117.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEe----------------------------------------CCCeEEEEEcCCCeee
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGA----------------------------------------CDASAKLWDIRDGSCK   55 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s----------------------------------------~dg~v~~wd~~~~~~~   55 (176)
                      ..+|...|++++|+||+.+|++|+                                        .|++|++||.++++++
T Consensus        15 ~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~   94 (355)
T 3vu4_A           15 ENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV   94 (355)
T ss_dssp             ----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE
T ss_pred             cccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE
Confidence            356778888888888777665554                                        3446666666666666


Q ss_pred             eEecCCCCCeeEEEEccCC-----------------------------------cEEEE--eeCCCcEEEeeCCCCCeee
Q psy15417         56 QTFPGHESDINAVTFFPNG-----------------------------------WAFAT--GSDDATCRLFDIRADQELA   98 (176)
Q Consensus        56 ~~~~~h~~~v~~v~~~~~~-----------------------------------~~l~s--~s~d~~i~iwd~~~~~~~~   98 (176)
                      ..+. +..+|.+++|+++.                                   ..++.  ++.||.|++||++++....
T Consensus        95 ~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~  173 (355)
T 3vu4_A           95 SRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSAT  173 (355)
T ss_dssp             EEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-----
T ss_pred             EEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccc
Confidence            6665 55678888887653                                   12222  5677888888877543100


Q ss_pred             --------------EEeecceEeceEEEEECCCCcEEEEEcCCCe-EEEEeCCCceeeeeec-C-CCccEEEEEEeCCCC
Q psy15417         99 --------------MYSHDNIICGITSVAFSRSGRLLLAGYDDFN-CNVWDSMKTERAGILA-G-HDNRVSCLGVTEDGM  161 (176)
Q Consensus        99 --------------~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~-i~v~d~~~~~~~~~~~-~-~~~~i~~~~~~~~~~  161 (176)
                                    ......+...|.+++|+|++.+|++|+.|++ +++||+.+++++..+. + |...|.+++|+|++.
T Consensus       174 ~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~  253 (355)
T 3vu4_A          174 TQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGS  253 (355)
T ss_dssp             -------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSC
T ss_pred             cccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCC
Confidence                          1112333457899999999999999999998 9999999999988887 5 999999999999999


Q ss_pred             EEEEccCCCcEEEeC
Q psy15417        162 AVATGSWDSFLRIWN  176 (176)
Q Consensus       162 ~l~tg~~d~~v~vwd  176 (176)
                      +|++|+.|++|++||
T Consensus       254 ~l~s~s~d~~v~iw~  268 (355)
T 3vu4_A          254 KLAVVSDKWTLHVFE  268 (355)
T ss_dssp             EEEEEETTCEEEEEE
T ss_pred             EEEEEECCCEEEEEE
Confidence            999999999999996

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.94  E-value=1.4e-25  Score=178.51  Aligned_cols=158  Identities=15%  Similarity=0.159  Sum_probs=140.5

Q ss_pred             ccCCCccC-eEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC--------eeeeEecCCCCCeeEEEEccCCcEEEEeeCC
Q psy15417         15 AASGHTGD-VMSLSLAP--DMRTFVSGACDASAKLWDIRDG--------SCKQTFPGHESDINAVTFFPNGWAFATGSDD   83 (176)
Q Consensus        15 ~~~gh~~~-V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~--------~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d   83 (176)
                      .+.+|.+. |.+++|+|  ++++|++|+.||+|++||+.++        +....+..|..+|.+++|+|+++.+++++.+
T Consensus        58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~  137 (615)
T 1pgu_A           58 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG  137 (615)
T ss_dssp             EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred             EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC
Confidence            47889999 99999999  9999999999999999999754        6778889999999999999999999999988


Q ss_pred             ----CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeeeecCCCc---cEEEEE
Q psy15417         84 ----ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGILAGHDN---RVSCLG  155 (176)
Q Consensus        84 ----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~---~i~~~~  155 (176)
                          +.|.+||.  ++.+..+  ..+...+.++.|+|++. .+++++.|+.+++||...++....+.+|..   .|.+++
T Consensus       138 ~~~~~~v~~~d~--~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~  213 (615)
T 1pgu_A          138 RDNFGVFISWDS--GNSLGEV--SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVE  213 (615)
T ss_dssp             SSCSEEEEETTT--CCEEEEC--CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEE
T ss_pred             CCCccEEEEEEC--CCcceee--ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEE
Confidence                68999983  3333332  33345789999999998 899999999999999999999999999998   999999


Q ss_pred             EeCC-CCEEEEccCCCcEEEeC
Q psy15417        156 VTED-GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       156 ~~~~-~~~l~tg~~d~~v~vwd  176 (176)
                      |+|+ +.+|++|+.|+.|++||
T Consensus       214 ~~~~~~~~l~~~~~dg~i~vwd  235 (615)
T 1pgu_A          214 FSPDSGEFVITVGSDRKISCFD  235 (615)
T ss_dssp             ECSTTCCEEEEEETTCCEEEEE
T ss_pred             ECCCCCCEEEEEeCCCeEEEEE
Confidence            9999 99999999999999996

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.94  E-value=5.4e-26  Score=169.21  Aligned_cols=156  Identities=12%  Similarity=0.081  Sum_probs=132.9

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDI   91 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~   91 (176)
                      ..+|.+.|.+++|+|++.+|++++.|+.|++||+.+++   ....+.+|..+|.+++|+|++. .+++++.|+.|++||+
T Consensus         7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~   86 (342)
T 1yfq_A            7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL   86 (342)
T ss_dssp             SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred             ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence            35799999999999999999999999999999998876   3445567999999999999999 9999999999999999


Q ss_pred             -CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC---------ceeeeeecCCCccEEEEEEeCCCC
Q psy15417         92 -RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK---------TERAGILAGHDNRVSCLGVTEDGM  161 (176)
Q Consensus        92 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~  161 (176)
                       .+++...... ..+...|.++.|+| +..+++++.|+.+++||+..         .++...+. |...+.+++|+|++ 
T Consensus        87 ~~~~~~~~~~~-~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-  162 (342)
T 1yfq_A           87 IGSPSFQALTN-NEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR-  162 (342)
T ss_dssp             SSSSSEEECBS-CCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred             ccCCceEeccc-cCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence             7765422222 01345788999999 99999999999999999876         55555555 88899999999886 


Q ss_pred             EEEEccCCCcEEEeC
Q psy15417        162 AVATGSWDSFLRIWN  176 (176)
Q Consensus       162 ~l~tg~~d~~v~vwd  176 (176)
                       +++++.|+.|++||
T Consensus       163 -l~~~~~d~~i~i~d  176 (342)
T 1yfq_A          163 -LIVGMNNSQVQWFR  176 (342)
T ss_dssp             -EEEEESTTEEEEEE
T ss_pred             -EEEEeCCCeEEEEE
Confidence             88999999999996

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.6e-25  Score=173.59  Aligned_cols=157  Identities=15%  Similarity=0.051  Sum_probs=135.5

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee----EecCCCCCeeEEEEccC---CcEEEEeeCCCcEEEee
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ----TFPGHESDINAVTFFPN---GWAFATGSDDATCRLFD   90 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~----~~~~h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd   90 (176)
                      +|...|.+++|+|++.+|++|+.+|.+++|++.+++...    .+.+|...|++++|+|+   +.+|++++.|++|++||
T Consensus       147 ~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd  226 (450)
T 2vdu_B          147 CFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISH  226 (450)
T ss_dssp             ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEE
T ss_pred             cCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEE
Confidence            577899999999999999999999999999998876554    77889999999999999   99999999999999999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC------------------------
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG------------------------  146 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~------------------------  146 (176)
                      +++++.+..+.. .+...|.+++|+ ++.+|++++.|++|++||+.+++.+..+..                        
T Consensus       227 ~~~~~~~~~~~~-~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (450)
T 2vdu_B          227 YPQCFIVDKWLF-GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENND  304 (450)
T ss_dssp             ESCTTCEEEECC-CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------
T ss_pred             CCCCceeeeeec-CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccc
Confidence            988776544321 223468899999 999999999999999999988887666542                        


Q ss_pred             -CCccEEEEEEeCCCCEEEEcc-CCCcEEEeC
Q psy15417        147 -HDNRVSCLGVTEDGMAVATGS-WDSFLRIWN  176 (176)
Q Consensus       147 -~~~~i~~~~~~~~~~~l~tg~-~d~~v~vwd  176 (176)
                       ....+..++|+|++.+|++++ .|+.|++||
T Consensus       305 ~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~  336 (450)
T 2vdu_B          305 IIEFAVSKIIKSKNLPFVAFFVEATKCIIILE  336 (450)
T ss_dssp             CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred             cceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence             234688999999999999998 899999996

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.94  E-value=1.6e-25  Score=191.18  Aligned_cols=162  Identities=24%  Similarity=0.392  Sum_probs=143.5

Q ss_pred             ccCCCccCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAP--DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~--~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+|.+.|.+++|+|  ++.++++|+.|+.|++||++++++...+.+|..+|++++|+|++..+++++.|+.|++||++
T Consensus       694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~  773 (1249)
T 3sfz_A          694 TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR  773 (1249)
T ss_dssp             EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGG
T ss_pred             EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCC
Confidence            3568999999999999  55689999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCeeeEEee-----------------------------------------------------cceEeceEEEEECCCCc
Q psy15417         93 ADQELAMYSH-----------------------------------------------------DNIICGITSVAFSRSGR  119 (176)
Q Consensus        93 ~~~~~~~~~~-----------------------------------------------------~~~~~~v~~~~~~~~~~  119 (176)
                      +++.......                                                     ..+...+.++.|+|++.
T Consensus       774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~  853 (1249)
T 3sfz_A          774 SANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH  853 (1249)
T ss_dssp             GTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT
T ss_pred             CCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC
Confidence            6543322110                                                     01123567899999999


Q ss_pred             EEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        120 LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       120 ~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .+++++.++.+++||..++.....+.+|...|.+++|+|++.+|++++.|+.|++||
T Consensus       854 ~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~  910 (1249)
T 3sfz_A          854 LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE  910 (1249)
T ss_dssp             EEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999999999999999999999999999999999999999999996

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.94  E-value=2.5e-25  Score=177.02  Aligned_cols=154  Identities=14%  Similarity=0.163  Sum_probs=138.0

Q ss_pred             CccCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCeee-eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCK-QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      |...+.+++|+  +.++++++. |+.|++||+.+++.. ..+.+|..+|++++|+|++.+|++++.|+.|++||+.+++.
T Consensus       445 ~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~  522 (615)
T 1pgu_A          445 LNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV  522 (615)
T ss_dssp             CSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred             cCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcc
Confidence            77889999999  889999999 999999999987765 67788999999999999999999999999999999988766


Q ss_pred             eeEEeecceEeceEEEEECC----------CCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         97 LAMYSHDNIICGITSVAFSR----------SGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~----------~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      +..+... +...+.+++|+|          ++.++++++.|+.|++||+..+ +++..+.+|...|.+++|+|++. |++
T Consensus       523 ~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s  600 (615)
T 1pgu_A          523 KTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVS  600 (615)
T ss_dssp             EECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEE
T ss_pred             eeEeecC-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEE
Confidence            5443210 335789999999          9999999999999999999887 77888899999999999999999 999


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      ++.|+.|++||
T Consensus       601 ~~~d~~v~iw~  611 (615)
T 1pgu_A          601 SGADACIKRWN  611 (615)
T ss_dssp             EETTSCEEEEE
T ss_pred             ecCCceEEEEe
Confidence            99999999996

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.94  E-value=6.1e-25  Score=170.26  Aligned_cols=156  Identities=22%  Similarity=0.351  Sum_probs=136.6

Q ss_pred             ccCCCccCeEEEEEc--CCCCEEEEEeCCCeEEEEEcCCCee-----------------------eeEecCCCCCeeEEE
Q psy15417         15 AASGHTGDVMSLSLA--PDMRTFVSGACDASAKLWDIRDGSC-----------------------KQTFPGHESDINAVT   69 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~--~~~~~l~s~s~dg~v~~wd~~~~~~-----------------------~~~~~~h~~~v~~v~   69 (176)
                      .+.+|.+.|.+++|+  +++.++++|+.||+|++||+++++.                       ...+.+|...|.++ 
T Consensus       198 ~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-  276 (464)
T 3v7d_B          198 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV-  276 (464)
T ss_dssp             EECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE-
T ss_pred             EECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE-
Confidence            467899999999998  5778999999999999999987652                       45678898888776 


Q ss_pred             EccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc
Q psy15417         70 FFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN  149 (176)
Q Consensus        70 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~  149 (176)
                       .+++..+++++.|+.|++||+++.+.+..+.  .+...+.++.|+|++..+++|+.|+.+++||+.+++++..+.+|..
T Consensus       277 -~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~  353 (464)
T 3v7d_B          277 -SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS--GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTA  353 (464)
T ss_dssp             -EEETTEEEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred             -cCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCC
Confidence             6788999999999999999998877665443  2335688999999999999999999999999999999999999999


Q ss_pred             cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        150 RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       150 ~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .|.+++++  +.+|++|+.|+.|++||
T Consensus       354 ~v~~~~~~--~~~l~s~s~dg~v~vwd  378 (464)
T 3v7d_B          354 LVGLLRLS--DKFLVSAAADGSIRGWD  378 (464)
T ss_dssp             CEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred             cEEEEEEc--CCEEEEEeCCCcEEEEE
Confidence            99999997  57999999999999996

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.94  E-value=7e-25  Score=169.19  Aligned_cols=154  Identities=24%  Similarity=0.492  Sum_probs=132.3

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|.+.|.+++|  ++.++++|+.||+|++||++++++...+.+|...|.+++|+  +..+++++.|+.|++||++++
T Consensus       168 ~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~  243 (435)
T 1p22_A          168 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASP  243 (435)
T ss_dssp             EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSS
T ss_pred             EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCC
Confidence            46789999999998  78899999999999999999999999999999999999996  459999999999999999877


Q ss_pred             CeeeE-EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         95 QELAM-YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        95 ~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      ..... .....+...+.++.+  ++.++++|+.|+.+++||+.+++.+..+.+|...+.++++.  +.++++|+.|+.|+
T Consensus       244 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~  319 (435)
T 1p22_A          244 TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIR  319 (435)
T ss_dssp             SCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred             CCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEE
Confidence            65432 122333346778887  67899999999999999998888888888999999988884  57899999999999


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      +||
T Consensus       320 iwd  322 (435)
T 1p22_A          320 LWD  322 (435)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            996

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.94  E-value=2e-24  Score=163.72  Aligned_cols=157  Identities=23%  Similarity=0.354  Sum_probs=134.6

Q ss_pred             CCCccCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC---CcEEEEeeCCCcEEEeeCC
Q psy15417         17 SGHTGDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN---GWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        17 ~gh~~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+|...|.+++|+| ++.+|++++.||.|++||+++++....+. +...+.++.+.|.   +..+++++.|+.+++||++
T Consensus        96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~  174 (408)
T 4a11_B           96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK  174 (408)
T ss_dssp             TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred             ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence            46999999999999 77899999999999999999999888877 6788999999985   4599999999999999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCce-eeeee---------------cCCCccEEEEE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTE-RAGIL---------------AGHDNRVSCLG  155 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~-~~~~~---------------~~~~~~i~~~~  155 (176)
                      +++.+..+.  .+...+.+++|+|++. ++++|+.|+.+++||+.... ....+               ..|...|.+++
T Consensus       175 ~~~~~~~~~--~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  252 (408)
T 4a11_B          175 SGSCSHILQ--GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC  252 (408)
T ss_dssp             SSCCCEEEC--CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred             Ccceeeeec--CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence            877655443  2334688999999998 68999999999999987654 22222               56888999999


Q ss_pred             EeCCCCEEEEccCCCcEEEeC
Q psy15417        156 VTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       156 ~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |+|++.+|++++.|+.|++||
T Consensus       253 ~~~~~~~l~~~~~dg~i~vwd  273 (408)
T 4a11_B          253 FTSDGLHLLTVGTDNRMRLWN  273 (408)
T ss_dssp             ECTTSSEEEEEETTSCEEEEE
T ss_pred             EcCCCCEEEEecCCCeEEEEE
Confidence            999999999999999999996

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.94  E-value=8.2e-26  Score=172.72  Aligned_cols=156  Identities=18%  Similarity=0.151  Sum_probs=118.2

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee-----eEecCCCCCeeEEEEcc--------CCcEEEEeeCCC
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK-----QTFPGHESDINAVTFFP--------NGWAFATGSDDA   84 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~-----~~~~~h~~~v~~v~~~~--------~~~~l~s~s~d~   84 (176)
                      +|...+....+++++.++++|+.|++|++||.+++++.     ..+.+|...|++++|+|        ++++|+++|.|+
T Consensus        87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~  166 (393)
T 4gq1_A           87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC  166 (393)
T ss_dssp             ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred             ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence            34444444555566778999999999999999988643     34678999999999998        789999999999


Q ss_pred             cEEEeeCCCCCeee-EEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeee-------------------
Q psy15417         85 TCRLFDIRADQELA-MYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGI-------------------  143 (176)
Q Consensus        85 ~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~-------------------  143 (176)
                      +|++||++++.... .+.+.   ..+.+++|+|++. ++++|+.|++|++||+.+++....                   
T Consensus       167 tv~~Wd~~~~~~~~~~~~~~---~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~  243 (393)
T 4gq1_A          167 TLIIWRLTDEGPILAGYPLS---SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP  243 (393)
T ss_dssp             EEEEEEEETTEEEEEEEECS---SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred             eEEEEECCCCceeeeecCCC---CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence            99999998765543 33333   3678999999874 799999999999999876543221                   


Q ss_pred             ------ecCCCccEEEEEEe-CCCCEEEEccCCCcEEEeC
Q psy15417        144 ------LAGHDNRVSCLGVT-EDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       144 ------~~~~~~~i~~~~~~-~~~~~l~tg~~d~~v~vwd  176 (176)
                            ..+|...+.+++|. +++..|++++.|+++++||
T Consensus       244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd  283 (393)
T 4gq1_A          244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN  283 (393)
T ss_dssp             GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred             ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence                  13566778888886 7899999999999999996

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.93  E-value=4.2e-24  Score=165.08  Aligned_cols=152  Identities=34%  Similarity=0.612  Sum_probs=133.5

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.+|.+.|.++.|+  +.++++|+.||+|++||+.++++...+.+|...|.++.|+  +..+++++.|++|++||++++
T Consensus       154 ~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~  229 (445)
T 2ovr_B          154 TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG  229 (445)
T ss_dssp             ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC
T ss_pred             EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC
Confidence            367899999999997  5699999999999999999999999999999999999995  568999999999999999887


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      +.+....  .+...+.++.+  ++..+++|+.|+.+++||+.+++....+.+|...+.+++|  ++.++++|+.|+.|++
T Consensus       230 ~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i  303 (445)
T 2ovr_B          230 QCLHVLM--GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRV  303 (445)
T ss_dssp             CEEEEEE--CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEE
T ss_pred             cEEEEEc--CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEE
Confidence            7665443  22346778887  6788999999999999999888888889999999999988  6789999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       304 ~d  305 (445)
T 2ovr_B          304 WD  305 (445)
T ss_dssp             EE
T ss_pred             EE
Confidence            96

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.93  E-value=6.2e-24  Score=163.88  Aligned_cols=151  Identities=25%  Similarity=0.469  Sum_probs=130.7

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..+|...|.|+.|  ++.++++|+.||+|++||+.+++....+.+|..+|.+++|  ++..+++|+.||+|++||+++++
T Consensus       129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~  204 (435)
T 1p22_A          129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE  204 (435)
T ss_dssp             CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred             ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence            3467778999876  7899999999999999999999999999999999999998  78899999999999999999887


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee---eeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA---GILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      .+..+.  .+...+.++.|++  ..+++|+.|+.+++||+...+..   ..+.+|...|.++++  ++.++++|+.|+.|
T Consensus       205 ~~~~~~--~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i  278 (435)
T 1p22_A          205 MLNTLI--HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTI  278 (435)
T ss_dssp             EEEEEC--CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred             EEEEEc--CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeE
Confidence            665443  2335688888864  58999999999999998876554   567789999999998  67899999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       279 ~vwd  282 (435)
T 1p22_A          279 KVWN  282 (435)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9996

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.93  E-value=6.4e-24  Score=164.06  Aligned_cols=153  Identities=23%  Similarity=0.441  Sum_probs=133.0

Q ss_pred             cccCCCccCe-EEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         14 PAASGHTGDV-MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        14 ~~~~gh~~~V-~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ..+.||.+.| .++  ++++.++++|+.||+|++||+.++++...+.+|..+|.+++|+  +..+++++.|++|++||+.
T Consensus       112 ~~l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~  187 (445)
T 2ovr_B          112 KVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE  187 (445)
T ss_dssp             EEEECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred             EEecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence            3578999875 554  4568999999999999999999999999999999999999997  6699999999999999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      +++....+.  .+...+.++.++  +..+++|+.|+++++||+.+++....+.+|...+.++++  ++.++++|+.|+.|
T Consensus       188 ~~~~~~~~~--~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i  261 (445)
T 2ovr_B          188 TGECIHTLY--GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV  261 (445)
T ss_dssp             TTEEEEEEC--CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCE
T ss_pred             cCcEEEEEC--CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEE
Confidence            876655443  233467888885  567999999999999999999999999999999999998  67899999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       262 ~iwd  265 (445)
T 2ovr_B          262 KVWD  265 (445)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9996

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.92  E-value=1.5e-23  Score=158.21  Aligned_cols=151  Identities=13%  Similarity=0.125  Sum_probs=117.5

Q ss_pred             EEEEEcCCCCEEEE--EeCCCeEEEEEcCCCe----------------eeeEecCCCCCeeEEEEccCCcEEEEeeCCCc
Q psy15417         24 MSLSLAPDMRTFVS--GACDASAKLWDIRDGS----------------CKQTFPGHESDINAVTFFPNGWAFATGSDDAT   85 (176)
Q Consensus        24 ~~~~~~~~~~~l~s--~s~dg~v~~wd~~~~~----------------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~   85 (176)
                      ..+++++  .+++.  |+.||.|++||+++++                +...+.+|..+|++++|+|++++|++++.|++
T Consensus       141 ~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~  218 (355)
T 3vu4_A          141 GVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT  218 (355)
T ss_dssp             EEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred             ceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence            3444555  44544  6889999999998865                26789999999999999999999999999999


Q ss_pred             -EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee--eee------------------
Q psy15417         86 -CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA--GIL------------------  144 (176)
Q Consensus        86 -i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~--~~~------------------  144 (176)
                       |++||+++++.+..+....+...|.+++|+|++.+|++++.|+++++||+......  ..+                  
T Consensus       219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (355)
T 3vu4_A          219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF  298 (355)
T ss_dssp             EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred             EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence             99999998887766552213357899999999999999999999999998654211  110                  


Q ss_pred             --c-CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        145 --A-GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       145 --~-~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                        . ........++|++++..|++++.||.+++|+
T Consensus       299 ~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~  333 (355)
T 3vu4_A          299 KLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFK  333 (355)
T ss_dssp             ECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEE
T ss_pred             EeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEE
Confidence              0 0111235689999999999999999999984

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.92  E-value=1.5e-23  Score=154.31  Aligned_cols=149  Identities=21%  Similarity=0.333  Sum_probs=124.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      ..++|+||+++ +|++| .|++|++||+.+++++..++  +|...|++++|+|+++++++|+.|++|++||+++++.+..
T Consensus        27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~  104 (318)
T 4ggc_A           27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN  104 (318)
T ss_dssp             TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence            35789999886 66655 59999999999999887765  5778899999999999999999999999999998877655


Q ss_pred             EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +..  +...+.+  +++++..+++++.++.+++|+.... .....+.+|...+..+++.+++.+|++++.|++|++||
T Consensus       105 ~~~--h~~~~~~--~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd  178 (318)
T 4ggc_A          105 MTS--HSARVGS--LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP  178 (318)
T ss_dssp             EEC--CSSCEEE--EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ecC--ccceEEE--eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence            432  2223444  4456689999999999999997664 45667788999999999999999999999999999996

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.92  E-value=5.7e-24  Score=167.52  Aligned_cols=148  Identities=10%  Similarity=0.151  Sum_probs=123.4

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-------eeeEe----cCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-------CKQTF----PGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-------~~~~~----~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      .|.+++|||||++|++|+.||+|++||+.+++       .+.++    .+|...|.+++|+|++  +++++.|+++++||
T Consensus       131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd  208 (588)
T 2j04_A          131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMT  208 (588)
T ss_dssp             CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEEC
T ss_pred             cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEE
Confidence            59999999999999999999999999999875       25666    6788899999999999  88999999999999


Q ss_pred             CCCCCee---eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE--eCCCCEEEE
Q psy15417         91 IRADQEL---AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV--TEDGMAVAT  165 (176)
Q Consensus        91 ~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~t  165 (176)
                      +.+....   ..... .+...|.+++|+  +..+++++ +++|++||...++......+|...+..++|  +|++..|++
T Consensus       209 ~~~~~~~~~~~tL~~-~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~  284 (588)
T 2j04_A          209 VSASSHQPVSRMIQN-ASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLM  284 (588)
T ss_dssp             CCSSSSCCCEEEEEC-CCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEE
T ss_pred             CCCCccccceeeecc-cccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEE
Confidence            9776632   22211 222458889998  57888886 699999998877764544489999999999  999999999


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      ++.||+ |+|.
T Consensus       285 a~edG~-klw~  294 (588)
T 2j04_A          285 SNKTSY-KVLL  294 (588)
T ss_dssp             CSSCEE-EEEE
T ss_pred             EcCCCC-EEEe
Confidence            999999 9983

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.92  E-value=6.3e-24  Score=158.39  Aligned_cols=156  Identities=17%  Similarity=0.193  Sum_probs=117.3

Q ss_pred             CccCeEEEEEcCC----CCEEEEEe--------------------CCCeEEEEEc-CCCeeeeEecCCCCCeeEEEEcc-
Q psy15417         19 HTGDVMSLSLAPD----MRTFVSGA--------------------CDASAKLWDI-RDGSCKQTFPGHESDINAVTFFP-   72 (176)
Q Consensus        19 h~~~V~~~~~~~~----~~~l~s~s--------------------~dg~v~~wd~-~~~~~~~~~~~h~~~v~~v~~~~-   72 (176)
                      |...|..++|+|+    ++.+++++                    .|+.|++|++ ..++.+..+.+|...++.++|+| 
T Consensus       110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~  189 (356)
T 2w18_A          110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV  189 (356)
T ss_dssp             SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred             cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence            4456777777777    66666655                    3899999999 45888888888999999999999 


Q ss_pred             --CCcEEEEeeCCCcEEEeeCCCCCeeeEEe-ecceEeceEEEEECCCCcEE------------EEEcCCCeEEEEeCCC
Q psy15417         73 --NGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLL------------LAGYDDFNCNVWDSMK  137 (176)
Q Consensus        73 --~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l------------~~g~~d~~i~v~d~~~  137 (176)
                        ++..|++++.|++|++||+++++.+..+. +......+.+++|+|++.++            ++|+.|+++++||..+
T Consensus       190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t  269 (356)
T 2w18_A          190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT  269 (356)
T ss_dssp             ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred             CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence              67999999999999999999998877664 22223467788999999876            5678899999999988


Q ss_pred             ceeeeee-----cCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        138 TERAGIL-----AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       138 ~~~~~~~-----~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++.+..+     .+|...+.+..++  +..+|+|+.|++|||||
T Consensus       270 gk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWD  311 (356)
T 2w18_A          270 TLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWD  311 (356)
T ss_dssp             TEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred             CEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEE
Confidence            8776654     3666665444444  77999999999999997

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.91  E-value=2.4e-22  Score=154.46  Aligned_cols=149  Identities=20%  Similarity=0.350  Sum_probs=124.8

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      +.+.++|+++ .+|++|. |++|++||+.++++...+.  +|...|++++|+|++++|++|+.|++|++||+++++.+..
T Consensus       107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~  184 (420)
T 4gga_A          107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN  184 (420)
T ss_dssp             TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence            3567999975 4666665 9999999999998877665  5778899999999999999999999999999998876655


Q ss_pred             EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc-eeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT-ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.  .+...+.++.+  ++..+++|+.|+.+++||.... .....+.+|...+..+.+.|++.++++++.|+.+++||
T Consensus       185 ~~--~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~  258 (420)
T 4gga_A          185 MT--SHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP  258 (420)
T ss_dssp             EC--CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             Ee--CCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEe
Confidence            43  23345666666  5679999999999999997654 45667889999999999999999999999999999995

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.91  E-value=4.3e-23  Score=159.86  Aligned_cols=155  Identities=13%  Similarity=0.081  Sum_probs=121.0

Q ss_pred             CccCeEEEEEcCCCCEEE----EEeCCCeEEEEEcCCC--------e---eeeEecCCCCCeeEEEEccC-CcEEEEeeC
Q psy15417         19 HTGDVMSLSLAPDMRTFV----SGACDASAKLWDIRDG--------S---CKQTFPGHESDINAVTFFPN-GWAFATGSD   82 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~----s~s~dg~v~~wd~~~~--------~---~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~   82 (176)
                      |.+.|.+++|+|++++|+    +|+.|++|++||++++        +   ....+.+|...|.+++|+|+ +..|++++.
T Consensus        91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~  170 (434)
T 2oit_A           91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA  170 (434)
T ss_dssp             CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred             CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence            566799999999999999    8999999999998754        1   24566779999999999998 889999999


Q ss_pred             CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-------CccEEEEE
Q psy15417         83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-------DNRVSCLG  155 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-------~~~i~~~~  155 (176)
                      |++|++||+++......  ...+...+.+++|+|++.+|++|+.|+++++||.. ++....+..|       ...+.+++
T Consensus       171 Dg~v~iwD~~~~~~~~~--~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~  247 (434)
T 2oit_A          171 DGSIAVLQVTETVKVCA--TLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL  247 (434)
T ss_dssp             TSCEEEEEESSSEEEEE--EECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred             CCeEEEEEcCCCcceee--ccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence            99999999987744322  22223468899999999999999999999999976 4444443333       33789999


Q ss_pred             EeCCCCEEEE-ccCCC------cEEEeC
Q psy15417        156 VTEDGMAVAT-GSWDS------FLRIWN  176 (176)
Q Consensus       156 ~~~~~~~l~t-g~~d~------~v~vwd  176 (176)
                      |++++.++++ .+.||      .+++||
T Consensus       248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~  275 (434)
T 2oit_A          248 WIGTYVFAIVYAAADGTLETSPDVVMAL  275 (434)
T ss_dssp             EEETTEEEEEEEETTCCSSSCCEEEEEE
T ss_pred             EecCceEEEEEccCCCccCCCCceEEEE
Confidence            9998877743 33332      277774

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.90  E-value=1.4e-21  Score=148.05  Aligned_cols=154  Identities=16%  Similarity=0.188  Sum_probs=127.8

Q ss_pred             CCCccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEeeCCCC
Q psy15417         17 SGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIRAD   94 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~~   94 (176)
                      .+| ..+.+++|+|+++++ ++++.|++|++||+.+++....+..+. .+.+++|+|+++.++ +++.++.|++||+.++
T Consensus        29 ~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~  106 (391)
T 1l0q_A           29 PVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN  106 (391)
T ss_dssp             ECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred             ecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC
Confidence            445 458999999999876 777799999999999999998888665 899999999998775 5556799999999887


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFL  172 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v  172 (176)
                      +.+......   ..+..++|+|+++.+ +++..++.+++||+.+++....+..+ ..+..++|+|++..+ ++++.|+.|
T Consensus       107 ~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v  182 (391)
T 1l0q_A          107 TVAGTVKTG---KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSI  182 (391)
T ss_dssp             EEEEEEECS---SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred             eEEEEEeCC---CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEE
Confidence            766554433   246789999999866 78888999999999888887777655 456889999999877 688889999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       183 ~~~d  186 (391)
T 1l0q_A          183 SVID  186 (391)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9996

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.89  E-value=2.1e-22  Score=152.61  Aligned_cols=122  Identities=10%  Similarity=0.091  Sum_probs=104.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCC----eEEEEEcCCCee----eeEecCCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDA----SAKLWDIRDGSC----KQTFPGHESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg----~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      ...+|...|.+++|+|++.++++++.|+    .+++|++.....    ...+.+|..+|++++|+|++++|++|+.|++|
T Consensus       214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V  293 (365)
T 4h5i_A          214 TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSI  293 (365)
T ss_dssp             CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCE
T ss_pred             ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEE
Confidence            4567999999999999999999999887    578899877643    45678899999999999999999999999999


Q ss_pred             EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417         87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~  137 (176)
                      ++||+++.+.+..+. ..+...|++++|+||+++|++|+.|++|+||++..
T Consensus       294 ~iwd~~~~~~~~~~~-~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          294 ALVKLKDLSMSKIFK-QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             EEEETTTTEEEEEET-TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred             EEEECCCCcEEEEec-CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence            999999877665432 22345799999999999999999999999999854

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.89  E-value=2.8e-21  Score=148.23  Aligned_cols=157  Identities=11%  Similarity=0.059  Sum_probs=132.7

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~~~   94 (176)
                      +.+|.+.|.+++|++++.++++++.|+.|++||+++++....+..|...+.+++|+|++..++ +++.|+.|++||++++
T Consensus       165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~  244 (433)
T 3bws_A          165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK  244 (433)
T ss_dssp             HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred             ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence            458999999999999999999999999999999999999999999999999999999998775 5558999999999887


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEc--------CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE-EEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGY--------DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA-VAT  165 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~--------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~t  165 (176)
                      +.+......   ..+..++|+|++..+++++        .|+.+++||+.+++..... .|...+..++|+|++.. +++
T Consensus       245 ~~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~  320 (433)
T 3bws_A          245 LEIRKTDKI---GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVS  320 (433)
T ss_dssp             EEEEECCCC---SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEE
T ss_pred             cEEEEecCC---CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEE
Confidence            665544332   2477899999999888877        5889999998887766554 45567889999999965 567


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      ++.|+.|++||
T Consensus       321 ~~~~~~v~v~d  331 (433)
T 3bws_A          321 DMCCSKIEVYD  331 (433)
T ss_dssp             ETTTTEEEEEE
T ss_pred             ecCCCEEEEEE
Confidence            79999999996

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.88  E-value=1.7e-20  Score=142.09  Aligned_cols=153  Identities=13%  Similarity=0.162  Sum_probs=128.2

Q ss_pred             CccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCe
Q psy15417         19 HTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~   96 (176)
                      +...+.+++|+|+++.+ ++++.++.|++||+++++....+..+. .+.+++|+|+++.+ ++++.++.|++||+++++.
T Consensus       114 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~  192 (391)
T 1l0q_A          114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV  192 (391)
T ss_dssp             CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred             CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE
Confidence            34568999999999977 788889999999999999888888664 57999999999876 6778899999999988766


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEc---CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFL  172 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v  172 (176)
                      ........   .+..++|+|++..+++++   .++.+++||+..++.+..+..+. .+.+++|+|++.+| ++++.|+.|
T Consensus       193 ~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v  268 (391)
T 1l0q_A          193 IDTVKVEA---APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTV  268 (391)
T ss_dssp             EEEEECSS---EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEE
T ss_pred             EEEEecCC---CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEE
Confidence            65554432   467899999999888877   68999999998888888777664 46889999999877 687899999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       269 ~v~d  272 (391)
T 1l0q_A          269 SVID  272 (391)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9996

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.88  E-value=2e-22  Score=156.09  Aligned_cols=156  Identities=9%  Similarity=0.093  Sum_probs=124.1

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-----------ee-----eeEecCCCCCeeEEEEccCCcEEE----
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDG-----------SC-----KQTFPGHESDINAVTFFPNGWAFA----   78 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~-----------~~-----~~~~~~h~~~v~~v~~~~~~~~l~----   78 (176)
                      ....++.+++++++.++++++.++ +++|+....           ..     ...+ .+...|++++|+|++++|+    
T Consensus        35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~  112 (434)
T 2oit_A           35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMM  112 (434)
T ss_dssp             CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEE
T ss_pred             CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEe
Confidence            345688999999999999999888 888875311           10     0112 2567899999999999999    


Q ss_pred             EeeCCCcEEEeeCCCC--------CeeeEEe-ecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCCC
Q psy15417         79 TGSDDATCRLFDIRAD--------QELAMYS-HDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGHD  148 (176)
Q Consensus        79 s~s~d~~i~iwd~~~~--------~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~  148 (176)
                      +++.|+.|++||+++.        +.+.... ...+...|.+++|+|+ +.++++++.|+++++||+.++.......+|.
T Consensus       113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~  192 (434)
T 2oit_A          113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST  192 (434)
T ss_dssp             ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred             ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence            8899999999998653        1111221 2223357899999998 7899999999999999998887666667788


Q ss_pred             ccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        149 NRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       149 ~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ..+.+++|+|+|.+|++|+.|++|++||
T Consensus       193 ~~v~~v~wspdg~~lasgs~dg~v~iwd  220 (434)
T 2oit_A          193 VAVTSVCWSPKGKQLAVGKQNGTVVQYL  220 (434)
T ss_dssp             GCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CceeEEEEcCCCCEEEEEcCCCcEEEEc
Confidence            8999999999999999999999999997

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.87  E-value=7.8e-21  Score=145.78  Aligned_cols=153  Identities=11%  Similarity=0.063  Sum_probs=128.0

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-----EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-----TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-----~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..+.+++|+|++.++++++.++.|++||+.+++...     .+.+|...|.+++|.|++..+++++.|+.|++||+++.+
T Consensus       123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~  202 (433)
T 3bws_A          123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA  202 (433)
T ss_dssp             SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred             CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence            345689999988888999999999999999998776     455788999999999999999999999999999998877


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEcc-------
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGS-------  167 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~-------  167 (176)
                      .+..+..  +...+.+++|+|++..+ +++..++.+++||+.+++....+..+ ..+.+++|+|++..+++++       
T Consensus       203 ~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~  279 (433)
T 3bws_A          203 YKATVDL--TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQE  279 (433)
T ss_dssp             EEEEEEC--SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred             EEEEEcC--CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccc
Confidence            6655442  22357889999999877 56668999999999888877776654 4588999999999998887       


Q ss_pred             -CCCcEEEeC
Q psy15417        168 -WDSFLRIWN  176 (176)
Q Consensus       168 -~d~~v~vwd  176 (176)
                       .|+.|++||
T Consensus       280 ~~dg~i~~~d  289 (433)
T 3bws_A          280 SGGGRLGIYS  289 (433)
T ss_dssp             SCCEEEEEEE
T ss_pred             cCCCeEEEEE
Confidence             588999996

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.86  E-value=8e-20  Score=140.63  Aligned_cols=157  Identities=13%  Similarity=0.091  Sum_probs=123.8

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCC---eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCc--EEE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDA---SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDAT--CRL   88 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg---~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~--i~i   88 (176)
                      .+.+|.+.|.+++|+|+++.|++++.++   .|++||+++++.. .+..|...+.+++|+|+++.|+ +++.++.  |.+
T Consensus       173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~  251 (415)
T 2hqs_A          173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV  251 (415)
T ss_dssp             EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred             EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEE
Confidence            4567999999999999999999999885   8999999998765 5677888999999999999777 7776665  899


Q ss_pred             eeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcC-CC--eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD-DF--NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      ||+.+++......+.   ..+..+.|+|+++.++.++. ++  .+.+||+..++. ..+..+...+..++|+|+|.+|+.
T Consensus       252 ~d~~~~~~~~l~~~~---~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~  327 (415)
T 2hqs_A          252 MDLASGQIRQVTDGR---SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVM  327 (415)
T ss_dssp             EETTTCCEEECCCCS---SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEE
T ss_pred             EECCCCCEEeCcCCC---CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEE
Confidence            999876543322222   35778999999998877765 44  677789776653 334456677889999999999988


Q ss_pred             ccCC---CcEEEeC
Q psy15417        166 GSWD---SFLRIWN  176 (176)
Q Consensus       166 g~~d---~~v~vwd  176 (176)
                      ++.+   ..|++||
T Consensus       328 ~~~~~g~~~i~~~d  341 (415)
T 2hqs_A          328 VSSNGGQQHIAKQD  341 (415)
T ss_dssp             EEECSSCEEEEEEE
T ss_pred             EECcCCceEEEEEE
Confidence            8764   5788885

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.82  E-value=1.8e-18  Score=133.03  Aligned_cols=155  Identities=14%  Similarity=0.132  Sum_probs=119.6

Q ss_pred             cCCCccCeEEEEEcCCCCEEE-EEeCCCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CC--cEEEe
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFV-SGACDAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DA--TCRLF   89 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~-s~s~dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~--~i~iw   89 (176)
                      +.+|.+.+.+++|+||++.|+ +++.++.  |++||+++++. ..+..|...+.+++|+|+++.|+.++. ++  .|.+|
T Consensus       218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~  296 (415)
T 2hqs_A          218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV  296 (415)
T ss_dssp             EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence            556888999999999999777 7776655  89999998875 567778889999999999998888776 45  56777


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC---CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD---FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d---~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      |+.+++........   ..+..+.|+|++++++.++.+   ..|++||+.+++.. .+..+. .+..++|+|+|.+|+.+
T Consensus       297 d~~~~~~~~l~~~~---~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~  371 (415)
T 2hqs_A          297 NINGGAPQRITWEG---SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYS  371 (415)
T ss_dssp             ETTSSCCEECCCSS---SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEE
T ss_pred             ECCCCCEEEEecCC---CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEE
Confidence            88766533221111   246678999999988877654   58999998877653 344444 78899999999999988


Q ss_pred             cCCC---cEEEeC
Q psy15417        167 SWDS---FLRIWN  176 (176)
Q Consensus       167 ~~d~---~v~vwd  176 (176)
                      +.++   .+++||
T Consensus       372 s~~~~~~~l~~~d  384 (415)
T 2hqs_A          372 SSQGMGSVLNLVS  384 (415)
T ss_dssp             EEETTEEEEEEEE
T ss_pred             EcCCCccEEEEEE
Confidence            8777   688775

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.79  E-value=7.2e-18  Score=122.12  Aligned_cols=156  Identities=12%  Similarity=0.127  Sum_probs=118.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CeeeeEecCC-CCCeeEEEEccCCcEEEEee--CCCcEEEeeC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-GSCKQTFPGH-ESDINAVTFFPNGWAFATGS--DDATCRLFDI   91 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s--~d~~i~iwd~   91 (176)
                      +..|.+.|.+++|+|++++|++++ ++.|.+||+.+ ++....+..+ ...+.+++|+|+++.++.++  .++..++|.+
T Consensus        37 ~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~  115 (297)
T 2ojh_A           37 VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL  115 (297)
T ss_dssp             EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred             eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence            456888999999999999999987 88999999999 8777666666 36789999999999999998  3456666654


Q ss_pred             --CCCCeeeEEeecceEeceEEEEECCCCcEEE-EEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417         92 --RADQELAMYSHDNIICGITSVAFSRSGRLLL-AGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        92 --~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                        .+.+. ......   ..+..+.|+|+++.++ ++..++.+++|++.. ......+..+...+.+++|+|++..|+.++
T Consensus       116 ~~~~~~~-~~~~~~---~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~  191 (297)
T 2ojh_A          116 PSTGGTP-RLMTKN---LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS  191 (297)
T ss_dssp             ETTCCCC-EECCSS---SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred             ECCCCce-EEeecC---CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence              43332 222222   1367789999998776 788889999998532 233445566778899999999999887665


Q ss_pred             -CCCcEEEeC
Q psy15417        168 -WDSFLRIWN  176 (176)
Q Consensus       168 -~d~~v~vwd  176 (176)
                       .++.+++|+
T Consensus       192 ~~~~~~~i~~  201 (297)
T 2ojh_A          192 SRTGQMQIWR  201 (297)
T ss_dssp             CTTSSCEEEE
T ss_pred             cCCCCccEEE
Confidence             588899884

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.78  E-value=2.3e-17  Score=122.26  Aligned_cols=158  Identities=12%  Similarity=0.118  Sum_probs=113.4

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCC-CeEEEEEcC--CCe--eeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeC
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACD-ASAKLWDIR--DGS--CKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDI   91 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~d-g~v~~wd~~--~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~   91 (176)
                      .|...+.+++|+|++++|++++.+ +.|.+|++.  +++  .+..+..+. .+..++|+|+++.+++++. ++.|.+||+
T Consensus        35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~  113 (343)
T 1ri6_A           35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL  113 (343)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence            466778899999999988888887 899999997  554  344555444 7899999999997766665 788999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCC-ceeee----eecC-CCccEEEEEEeCCCCEEE
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMK-TERAG----ILAG-HDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~-~~~~~----~~~~-~~~~i~~~~~~~~~~~l~  164 (176)
                      ..+..............+..++|+|+++.++++. .++.+++||+.. ++...    .... ....+..++|+|++.+++
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~  193 (343)
T 1ri6_A          114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY  193 (343)
T ss_dssp             ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred             CCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence            5322211111111112466789999998776665 889999999876 43321    2222 334678899999998764


Q ss_pred             -EccCCCcEEEeC
Q psy15417        165 -TGSWDSFLRIWN  176 (176)
Q Consensus       165 -tg~~d~~v~vwd  176 (176)
                       ++..++.+++||
T Consensus       194 ~~~~~~~~i~~~~  206 (343)
T 1ri6_A          194 CVNELNSSVDVWE  206 (343)
T ss_dssp             EEETTTTEEEEEE
T ss_pred             EEeCCCCEEEEEE
Confidence             555889999995

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.77  E-value=1.9e-17  Score=135.07  Aligned_cols=146  Identities=16%  Similarity=0.097  Sum_probs=114.1

Q ss_pred             ccCeEEEEEcCCCCEEEEEeC-CC-----eEEEEEcCCCeeeeEecCCCC------------------------CeeEEE
Q psy15417         20 TGDVMSLSLAPDMRTFVSGAC-DA-----SAKLWDIRDGSCKQTFPGHES------------------------DINAVT   69 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~-dg-----~v~~wd~~~~~~~~~~~~h~~------------------------~v~~v~   69 (176)
                      ...|..++|+|||++|++++. |+     .|++||+.+++....+..+..                        .+.+++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            456899999999999999998 88     899999999987776654432                        378999


Q ss_pred             EccCCcEEEEeeCCCcEEEeeCCCC---CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC
Q psy15417         70 FFPNGWAFATGSDDATCRLFDIRAD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG  146 (176)
Q Consensus        70 ~~~~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~  146 (176)
                      |+|+|+.|+.++. +.|.+||+.++   +........   ..+..+.|+|||+.++.+. ++.|++||+..++.......
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~---~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~  190 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGE---GFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD  190 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSS---SCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCC---cccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence            9999999999887 89999999876   433222221   3477899999999988876 45899999887766554443


Q ss_pred             CCcc----------------EEEEEEeCCCCEEEEccCCC
Q psy15417        147 HDNR----------------VSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus       147 ~~~~----------------i~~~~~~~~~~~l~tg~~d~  170 (176)
                      +...                +..++|+|+|..|+.++.|+
T Consensus       191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~  230 (741)
T 2ecf_A          191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE  230 (741)
T ss_dssp             CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred             CccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence            3332                36789999999999887765

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.76  E-value=1.5e-16  Score=126.31  Aligned_cols=152  Identities=8%  Similarity=-0.009  Sum_probs=120.9

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEc--CCCeeeeEecCCCCCeeEEEEcc----CCcEEEEee-CCCcEEEeeCCCCC
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDI--RDGSCKQTFPGHESDINAVTFFP----NGWAFATGS-DDATCRLFDIRADQ   95 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~~----~~~~l~s~s-~d~~i~iwd~~~~~   95 (176)
                      +..++|+|++++|++++.|++|.+||+  .+++++.+++. ...+.+++|+|    +++++++++ .+++|.+||..+.+
T Consensus       181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~  259 (543)
T 1nir_A          181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE  259 (543)
T ss_dssp             EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred             cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence            889999999999999999999999999  88988888884 45689999999    999998888 48999999998887


Q ss_pred             eeeEEeecc---------eEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEE
Q psy15417         96 ELAMYSHDN---------IICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        96 ~~~~~~~~~---------~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l  163 (176)
                      .+.......         ....+..+.++|++. ++++...+++|.+||....+.+.  .+ .+...+..++|+|++.++
T Consensus       260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l  338 (543)
T 1nir_A          260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYF  338 (543)
T ss_dssp             EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEE
T ss_pred             cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEE
Confidence            766554311         112577899999765 56777889999999987654332  33 345567788999999976


Q ss_pred             E-EccCCCcEEEeC
Q psy15417        164 A-TGSWDSFLRIWN  176 (176)
Q Consensus       164 ~-tg~~d~~v~vwd  176 (176)
                      + ++..+++|++||
T Consensus       339 ~va~~~~~~v~v~D  352 (543)
T 1nir_A          339 MTAANNSNKVAVID  352 (543)
T ss_dssp             EEEEGGGTEEEEEE
T ss_pred             EEEecCCCeEEEEE
Confidence            5 455688999996

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.75  E-value=2.2e-18  Score=140.13  Aligned_cols=147  Identities=9%  Similarity=0.076  Sum_probs=112.2

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC---CeeEEEEccCCcEEEEeeCC---------CcEEEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES---DINAVTFFPNGWAFATGSDD---------ATCRLF   89 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~s~d---------~~i~iw   89 (176)
                      .+.+++|+|||+++++ +.||+|++||+.+++....+..|..   .|.+++|+|+|+++++++.+         +.+.+|
T Consensus        18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~   96 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS   96 (723)
T ss_dssp             CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred             cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence            4678899999997766 7899999999999988888877764   49999999999999999875         678899


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCcc------------------E
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR------------------V  151 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~------------------i  151 (176)
                      |+.+++.........+...+..++|+|||+.++.++. +.+++||+..++.......+...                  +
T Consensus        97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~  175 (723)
T 1xfd_A           97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH  175 (723)
T ss_dssp             ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred             ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence            9987764222111221123567899999998888775 78999998877665544433322                  2


Q ss_pred             EEEEEeCCCCEEEEccCCC
Q psy15417        152 SCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus       152 ~~~~~~~~~~~l~tg~~d~  170 (176)
                      ..++|+|+|+.|+.++.|+
T Consensus       176 ~~~~~SpDg~~la~~~~~~  194 (723)
T 1xfd_A          176 IAHWWSPDGTRLAYAAIND  194 (723)
T ss_dssp             EEEEECTTSSEEEEEEEEC
T ss_pred             ceEEECCCCCEEEEEEECC
Confidence            6899999999999887553

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.75  E-value=3.3e-16  Score=116.01  Aligned_cols=154  Identities=12%  Similarity=0.052  Sum_probs=113.3

Q ss_pred             CccCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCee-eeEecCCCCCeeEEEEccCCcEEEEeeCCC---cEEEeeCCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSC-KQTFPGHESDINAVTFFPNGWAFATGSDDA---TCRLFDIRA   93 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~---~i~iwd~~~   93 (176)
                      +...+ .++|+|+++++++++. ++.|.+||..+++. ...+..+..+..+++|+|++++++++..++   .|.+||+.+
T Consensus        39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~  117 (331)
T 3u4y_A           39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK  117 (331)
T ss_dssp             CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred             cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence            34555 9999999996666655 88999999999987 777776766666699999999988655553   899999988


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCc-EEEEEcCCCe-EEEEeCCCceee----eeecCCCccEEEEEEeCCCCEE-EEc
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFN-CNVWDSMKTERA----GILAGHDNRVSCLGVTEDGMAV-ATG  166 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~-i~v~d~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l-~tg  166 (176)
                      ++.+.......   ....++|+|+++ ++++...++. +.+|++.....+    ............++|+|++.++ +++
T Consensus       118 ~~~~~~~~~~~---~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~  194 (331)
T 3u4y_A          118 NKFISTIPIPY---DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVAN  194 (331)
T ss_dssp             TEEEEEEECCT---TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEE
T ss_pred             CCeEEEEECCC---CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEe
Confidence            77655544322   356899999997 4455566677 999997643221    1222334457889999999855 556


Q ss_pred             cCCCcEEEeC
Q psy15417        167 SWDSFLRIWN  176 (176)
Q Consensus       167 ~~d~~v~vwd  176 (176)
                      ..++.|++||
T Consensus       195 ~~~~~v~v~d  204 (331)
T 3u4y_A          195 LIGNSIGILE  204 (331)
T ss_dssp             TTTTEEEEEE
T ss_pred             CCCCeEEEEE
Confidence            6788999996

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.74  E-value=1e-16  Score=118.44  Aligned_cols=149  Identities=15%  Similarity=0.107  Sum_probs=115.9

Q ss_pred             CeEEEEEcCCCCEEEEEe------------CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         22 DVMSLSLAPDMRTFVSGA------------CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s------------~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      .+..++|+|+++.+++++            .++.|.+||+.+++....+.. ...+.+++|+|+++.++.+  ++.+.+|
T Consensus        83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~  159 (337)
T 1pby_B           83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM  159 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred             cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence            567899999999888886            579999999999988877765 4567889999999988777  6889999


Q ss_pred             eCCCCCeeeEEeecc----------------------------------------------------------------e
Q psy15417         90 DIRADQELAMYSHDN----------------------------------------------------------------I  105 (176)
Q Consensus        90 d~~~~~~~~~~~~~~----------------------------------------------------------------~  105 (176)
                      |+.+++.........                                                                .
T Consensus       160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~  239 (337)
T 1pby_B          160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM  239 (337)
T ss_dssp             ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred             ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence            987654432221100                                                                0


Q ss_pred             EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        106 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       106 ~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ...+..+.|+|+++.++++  ++.+++||+.+++....+..+ ..+.+++|+|++++|++++.++.|++||
T Consensus       240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d  307 (337)
T 1pby_B          240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYD  307 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred             CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence            0123468999999988887  789999999888777666533 4567899999999988888899999996

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.74  E-value=2.1e-16  Score=125.53  Aligned_cols=145  Identities=15%  Similarity=0.081  Sum_probs=119.3

Q ss_pred             EcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC--CCCCeeeEEeecce
Q psy15417         28 LAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI--RADQELAMYSHDNI  105 (176)
Q Consensus        28 ~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~--~~~~~~~~~~~~~~  105 (176)
                      |+|++..+++++.|++|.+||..+++++.++..+.. +..++|+|+++++++++.|++|++||+  .+.+.+......  
T Consensus       145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g--  221 (543)
T 1nir_A          145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG--  221 (543)
T ss_dssp             CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC--
T ss_pred             cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC--
Confidence            788999999999999999999999999999984433 889999999999999999999999999  666555444432  


Q ss_pred             EeceEEEEECC----CCcEEEEEc-CCCeEEEEeCCCceeeeeecC----------C-CccEEEEEEeCCCC-EEEEccC
Q psy15417        106 ICGITSVAFSR----SGRLLLAGY-DDFNCNVWDSMKTERAGILAG----------H-DNRVSCLGVTEDGM-AVATGSW  168 (176)
Q Consensus       106 ~~~v~~~~~~~----~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~----------~-~~~i~~~~~~~~~~-~l~tg~~  168 (176)
                       ..+..++|+|    +++++++++ .++++.+||..+.+++..+..          | ...+..+.++|++. ++++...
T Consensus       222 -~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~  300 (543)
T 1nir_A          222 -IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE  300 (543)
T ss_dssp             -SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred             -CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence             2356799999    999888877 589999999988888777654          2 23688899999754 5678888


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      ++.|.+||
T Consensus       301 ~g~i~vvd  308 (543)
T 1nir_A          301 TGKVLLVN  308 (543)
T ss_dssp             TTEEEEEE
T ss_pred             CCeEEEEE
Confidence            99999986

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.73  E-value=8.3e-16  Score=114.48  Aligned_cols=152  Identities=9%  Similarity=-0.035  Sum_probs=119.6

Q ss_pred             eEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         23 VMSLSLAPDMRTFVSGA--CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      +.++.|+|+++.+++++  .++.|.+||.++++....+..+...+.+++|+|+++.++.++.++.+.+||+.+++.....
T Consensus       143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~  222 (353)
T 3vgz_A          143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK  222 (353)
T ss_dssp             EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred             CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence            68899999999777766  4788999999999988888866666889999999999999999999999999887766554


Q ss_pred             eec--ceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEEeC
Q psy15417        101 SHD--NIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN  176 (176)
Q Consensus       101 ~~~--~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vwd  176 (176)
                      ...  .....+..++|+|++..++++. .++.+.+||..+++....+.....  ..++|+|++..+ ++...++.|.+||
T Consensus       223 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d  300 (353)
T 3vgz_A          223 KLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVID  300 (353)
T ss_dssp             ECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             EcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEE
Confidence            431  1123456789999998665554 558999999988877766654332  468899999855 4555789999996

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.72  E-value=2.7e-15  Score=112.06  Aligned_cols=155  Identities=11%  Similarity=0.097  Sum_probs=109.9

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCeee--eEecCC-CCCeeEEEEccCCcEEEE-eeCCCcEEEeeCCC--
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIR-DGSCK--QTFPGH-ESDINAVTFFPNGWAFAT-GSDDATCRLFDIRA--   93 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~-~~~~~--~~~~~h-~~~v~~v~~~~~~~~l~s-~s~d~~i~iwd~~~--   93 (176)
                      ..+.+++|+|+++++++...++.|.+|++. +++..  ..+..+ ...+..++|+|++++++. ...++.+.+|++..  
T Consensus       141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~  220 (347)
T 3hfq_A          141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT  220 (347)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred             CCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence            458899999999977777778899999998 55432  222333 336788999999985555 56678999999864  


Q ss_pred             CCeeeEEeecceE------eceEEEEECCCCcEE-EEEcCCCeEEEEeCCC---ceeeeeecCCCccEEEEEEeCCCCEE
Q psy15417         94 DQELAMYSHDNII------CGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK---TERAGILAGHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        94 ~~~~~~~~~~~~~------~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l  163 (176)
                      ++...........      ..+..++|+|+++++ ++...++.+.+|++..   .+.+..+..+...+..++|+|++.+|
T Consensus       221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l  300 (347)
T 3hfq_A          221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV  300 (347)
T ss_dssp             TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEE
T ss_pred             CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEE
Confidence            3221111111100      236779999999876 5566789999999862   24555566666667889999999988


Q ss_pred             EEccC-CCcEEEe
Q psy15417        164 ATGSW-DSFLRIW  175 (176)
Q Consensus       164 ~tg~~-d~~v~vw  175 (176)
                      ++++. ++.+.+|
T Consensus       301 ~v~~~~~~~v~v~  313 (347)
T 3hfq_A          301 VVVNQNTDNATLY  313 (347)
T ss_dssp             EEEETTTTEEEEE
T ss_pred             EEEEcCCCcEEEE
Confidence            77765 4889998

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.72  E-value=9.3e-16  Score=114.23  Aligned_cols=153  Identities=7%  Similarity=0.002  Sum_probs=118.3

Q ss_pred             CeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCC---------eeEEEEccCCcEEEEee--CCCcEEEe
Q psy15417         22 DVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESD---------INAVTFFPNGWAFATGS--DDATCRLF   89 (176)
Q Consensus        22 ~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~---------v~~v~~~~~~~~l~s~s--~d~~i~iw   89 (176)
                      .+..+.|+|+++.+ ++...++.|.+||.++++....+..+...         +.+++|+|+++.++.++  .++.|.+|
T Consensus        90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~  169 (353)
T 3vgz_A           90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVV  169 (353)
T ss_dssp             CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEE
T ss_pred             CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEE
Confidence            45678999999855 55555799999999999988887765422         68899999998777665  47889999


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC----CCccEEEEEEeCCCCEEEE
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG----HDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~t  165 (176)
                      |+.+.+.........  ..+..+.|+|++..++++..++.+.+||..+++....+..    +...+..++|+|++.+++.
T Consensus       170 d~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~  247 (353)
T 3vgz_A          170 DGGNIKLKTAIQNTG--KMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFI  247 (353)
T ss_dssp             ETTTTEEEEEECCCC--TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred             cCCCCceEEEecCCC--CccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence            998876665544111  2355788999999999999999999999988887766543    4556788999999987655


Q ss_pred             cc-CCCcEEEeC
Q psy15417        166 GS-WDSFLRIWN  176 (176)
Q Consensus       166 g~-~d~~v~vwd  176 (176)
                      ++ .++.|.+||
T Consensus       248 ~~~~~~~v~~~d  259 (353)
T 3vgz_A          248 TDSKAAEVLVVD  259 (353)
T ss_dssp             EESSSSEEEEEE
T ss_pred             EeCCCCEEEEEE
Confidence            54 458999986

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.72  E-value=6.1e-17  Score=131.64  Aligned_cols=153  Identities=11%  Similarity=0.007  Sum_probs=113.6

Q ss_pred             CeEEEEEcCCCCEEEEEeCC---------CeEEEEEcCCCeeeeEec---CCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACD---------ASAKLWDIRDGSCKQTFP---GHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~d---------g~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      .|.+++|||||++|++++.+         +.+.+||+.+++. ..+.   +|...+..++|+|+|+.++.++. +.|.+|
T Consensus        62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~  139 (723)
T 1xfd_A           62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC  139 (723)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred             ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence            48999999999999999875         6788999998875 3333   34555889999999999999886 799999


Q ss_pred             eCCCCCeeeEEeecce-E---------------eceEEEEECCCCcEEEEEcCCC-------------------------
Q psy15417         90 DIRADQELAMYSHDNI-I---------------CGITSVAFSRSGRLLLAGYDDF-------------------------  128 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~-~---------------~~v~~~~~~~~~~~l~~g~~d~-------------------------  128 (176)
                      |+.+++.......... .               ..+..+.|+||++.|+.+..++                         
T Consensus       140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (723)
T 1xfd_A          140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP  219 (723)
T ss_dssp             SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred             ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence            9987665443321110 0               0226799999999888876442                         


Q ss_pred             ---------eEEEEeCCCceeeeeecCC------CccEEEEEEeCCCCEEEEccC----CCcEEEeC
Q psy15417        129 ---------NCNVWDSMKTERAGILAGH------DNRVSCLGVTEDGMAVATGSW----DSFLRIWN  176 (176)
Q Consensus       129 ---------~i~v~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~tg~~----d~~v~vwd  176 (176)
                               .+++||+..++....+..+      ...+..++|+|+|..|++.+.    +..|++||
T Consensus       220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d  286 (723)
T 1xfd_A          220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD  286 (723)
T ss_dssp             BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred             CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence                     7999998877654444443      567889999999998876543    35677775

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.72  E-value=1.2e-15  Score=112.93  Aligned_cols=155  Identities=12%  Similarity=0.153  Sum_probs=109.8

Q ss_pred             cCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCC-Ceeee----EecC-CCCCeeEEEEccCCcEEEEe-eCCCcEEEeeCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGA-CDASAKLWDIRD-GSCKQ----TFPG-HESDINAVTFFPNGWAFATG-SDDATCRLFDIR   92 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~-~~~~~----~~~~-h~~~v~~v~~~~~~~~l~s~-s~d~~i~iwd~~   92 (176)
                      ..+.+++|+|+++.+++++ .++.|.+||+.+ ++...    .+.. ....+.+++|+|+++.++.+ ..++.+.+|++.
T Consensus       129 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~  208 (343)
T 1ri6_A          129 DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK  208 (343)
T ss_dssp             TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred             CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence            3578899999999888777 899999999987 64432    2333 23578899999999866555 478999999985


Q ss_pred             C--CCee--eEEe-ecc---eEeceEEEEECCCCcEEE-EEcCCCeEEEEeCC----CceeeeeecCCCccEEEEEEeCC
Q psy15417         93 A--DQEL--AMYS-HDN---IICGITSVAFSRSGRLLL-AGYDDFNCNVWDSM----KTERAGILAGHDNRVSCLGVTED  159 (176)
Q Consensus        93 ~--~~~~--~~~~-~~~---~~~~v~~~~~~~~~~~l~-~g~~d~~i~v~d~~----~~~~~~~~~~~~~~i~~~~~~~~  159 (176)
                      .  +...  .... ...   ....+..++|+|+++.++ ++..++.+++||+.    +.+.+..+..+.. +..++|+|+
T Consensus       209 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~d  287 (343)
T 1ri6_A          209 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHS  287 (343)
T ss_dssp             CTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTT
T ss_pred             CCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCC
Confidence            3  2221  1111 110   012355799999998766 55688999999987    2344444544444 778999999


Q ss_pred             CCEEEEcc-CCCcEEEeC
Q psy15417        160 GMAVATGS-WDSFLRIWN  176 (176)
Q Consensus       160 ~~~l~tg~-~d~~v~vwd  176 (176)
                      +.+|++++ .++.+++|+
T Consensus       288 g~~l~~~~~~~~~v~v~~  305 (343)
T 1ri6_A          288 GKYLIAAGQKSHHISVYE  305 (343)
T ss_dssp             SSEEEEECTTTCEEEEEE
T ss_pred             CCEEEEecCCCCeEEEEE
Confidence            99877766 689999993

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.72  E-value=1.5e-16  Score=129.80  Aligned_cols=159  Identities=11%  Similarity=0.037  Sum_probs=120.6

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCC----------------eeEEEEccCCcEEE
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD----------------INAVTFFPNGWAFA   78 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~----------------v~~v~~~~~~~~l~   78 (176)
                      .+.+|...+..++|+|||+.++.++ ++.|.+||+.+++.......+...                +.++.|+|+|+.|+
T Consensus       146 ~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~  224 (741)
T 2ecf_A          146 QLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIA  224 (741)
T ss_dssp             BCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEE
T ss_pred             EcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEE
Confidence            4667888899999999999999887 568999999998766555444332                47899999999999


Q ss_pred             EeeCCC---------------------------------cEEEeeCCC-CCeeeEEeecceEeceEEEEECCCCcEEEEE
Q psy15417         79 TGSDDA---------------------------------TCRLFDIRA-DQELAMYSHDNIICGITSVAFSRSGRLLLAG  124 (176)
Q Consensus        79 s~s~d~---------------------------------~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g  124 (176)
                      .++.|+                                 .|.+||+.+ ++.........+...+..+.| ||++.++.+
T Consensus       225 ~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~  303 (741)
T 2ecf_A          225 YARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQ  303 (741)
T ss_dssp             EEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEE
T ss_pred             EEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEE
Confidence            887765                                 788899877 654433211112245778999 999988765


Q ss_pred             cC-----CCeEEEEeCCCceeeeeecCCCc----cEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        125 YD-----DFNCNVWDSMKTERAGILAGHDN----RVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       125 ~~-----d~~i~v~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ..     +..+++||..+++.......+..    .+..++|+|+|.++++++.|+.++||
T Consensus       304 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~  363 (741)
T 2ecf_A          304 RQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLY  363 (741)
T ss_dssp             EEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEE
T ss_pred             EecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEE
Confidence            43     56799999988876665554433    34578999999999999999988887

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.72  E-value=2.5e-16  Score=113.93  Aligned_cols=152  Identities=12%  Similarity=0.112  Sum_probs=110.4

Q ss_pred             ccCeEEEEEcCCCCEEEEEeC--CCeEEEEE--cCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEeeCC--
Q psy15417         20 TGDVMSLSLAPDMRTFVSGAC--DASAKLWD--IRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLFDIR--   92 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~--dg~v~~wd--~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iwd~~--   92 (176)
                      ...|.+++|+|+++++++++.  ++..++|.  ..+++ ...+..+ ..+..++|+|+++.++ +++.++.+++|++.  
T Consensus        84 ~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~  161 (297)
T 2ojh_A           84 TICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID  161 (297)
T ss_dssp             CCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred             cccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence            467889999999999999983  34555554  45544 3444433 3488999999998776 78889999999864  


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCC-CceeeeeecCCCccEEEEEEeCCCCEEEEccCC-
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSM-KTERAGILAGHDNRVSCLGVTEDGMAVATGSWD-  169 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d-  169 (176)
                      +.+......   ....+..+.|+|+++.++.+. .++.+++|++. .......+..|...+..++|+|++.+|+.++.+ 
T Consensus       162 ~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~  238 (297)
T 2ojh_A          162 SGVETRLTH---GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDA  238 (297)
T ss_dssp             TCCEEECCC---SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred             CCcceEccc---CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence            332221111   223577899999999776655 58889999865 445566677777888999999999999888766 


Q ss_pred             ----------CcEEEeC
Q psy15417        170 ----------SFLRIWN  176 (176)
Q Consensus       170 ----------~~v~vwd  176 (176)
                                +.+++||
T Consensus       239 ~~~~~~~~~~~~l~~~d  255 (297)
T 2ojh_A          239 DVFDHPRDLDVRVQLMD  255 (297)
T ss_dssp             TCCSCCSSEEEEEEEEE
T ss_pred             CCCcccccCceEEEEEe
Confidence                      4588875

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.71  E-value=4.3e-15  Score=111.57  Aligned_cols=155  Identities=11%  Similarity=0.084  Sum_probs=107.3

Q ss_pred             ccCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCe-------e------eeEecCCCCCeeEEEEccCCcEEEEee-CCC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGS-------C------KQTFPGHESDINAVTFFPNGWAFATGS-DDA   84 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~-------~------~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~   84 (176)
                      ...+.+++|+|+++++++++ .++.|.+|++....       .      ......+...+.+++|+|+++.++.++ .++
T Consensus       154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~  233 (361)
T 3scy_A          154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG  233 (361)
T ss_dssp             SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred             CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence            34568899999999665544 58899999887543       1      111223445678999999999877776 689


Q ss_pred             cEEEeeCCCCCeeeEEee---cceEeceEEEEECCCCcEEEEEcC--CCeEEEEeCC--Cce--eeeeecCCCccEEEEE
Q psy15417         85 TCRLFDIRADQELAMYSH---DNIICGITSVAFSRSGRLLLAGYD--DFNCNVWDSM--KTE--RAGILAGHDNRVSCLG  155 (176)
Q Consensus        85 ~i~iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~--~~~--~~~~~~~~~~~i~~~~  155 (176)
                      .|.+|++.++........   .........++|+|++++++++..  ++.+.+|++.  .++  .+..+.. ...+..++
T Consensus       234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~  312 (361)
T 3scy_A          234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFI  312 (361)
T ss_dssp             EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEE
T ss_pred             eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEE
Confidence            999999976543221111   111123568999999998866554  4899999975  233  3444443 44567899


Q ss_pred             EeCCCCEEEEcc-CCCcEEEe
Q psy15417        156 VTEDGMAVATGS-WDSFLRIW  175 (176)
Q Consensus       156 ~~~~~~~l~tg~-~d~~v~vw  175 (176)
                      |+|+|++|++++ .++.|.+|
T Consensus       313 ~spdg~~l~~~~~~~~~v~v~  333 (361)
T 3scy_A          313 ITPNGKYLLVACRDTNVIQIF  333 (361)
T ss_dssp             ECTTSCEEEEEETTTTEEEEE
T ss_pred             ECCCCCEEEEEECCCCCEEEE
Confidence            999999887776 67889986

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.71  E-value=8.5e-16  Score=114.76  Aligned_cols=157  Identities=15%  Similarity=0.120  Sum_probs=110.8

Q ss_pred             CccCeEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGAC---DASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIR   92 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~---dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~   92 (176)
                      +...+..++|+|+++ |++++.   ++.|.+||+.+++  .+..+..+...+..++|+|+++.+++++ .++.+.+|++.
T Consensus        38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~  116 (347)
T 3hfq_A           38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA  116 (347)
T ss_dssp             ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence            445667899999999 555554   6899999998776  3444455677889999999999888887 67899999986


Q ss_pred             CCCeee---EEeecce-------EeceEEEEECCCCcEEEEEcCCCeEEEEeCC-Cceee--eeecCC-CccEEEEEEeC
Q psy15417         93 ADQELA---MYSHDNI-------ICGITSVAFSRSGRLLLAGYDDFNCNVWDSM-KTERA--GILAGH-DNRVSCLGVTE  158 (176)
Q Consensus        93 ~~~~~~---~~~~~~~-------~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~-~~~~~--~~~~~~-~~~i~~~~~~~  158 (176)
                      ......   .......       ...+..++|+|+++++++...++.+++|++. .++..  .....+ ......++|+|
T Consensus       117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp  196 (347)
T 3hfq_A          117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP  196 (347)
T ss_dssp             TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT
T ss_pred             CCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC
Confidence            332222   1111110       1136789999999977777788999999987 34322  222222 23567899999


Q ss_pred             CCCEEE-EccCCCcEEEeC
Q psy15417        159 DGMAVA-TGSWDSFLRIWN  176 (176)
Q Consensus       159 ~~~~l~-tg~~d~~v~vwd  176 (176)
                      +|++++ ++..++.+++|+
T Consensus       197 dg~~l~v~~~~~~~v~v~~  215 (347)
T 3hfq_A          197 DGQYAFLAGELSSQIASLK  215 (347)
T ss_dssp             TSSEEEEEETTTTEEEEEE
T ss_pred             CCCEEEEEeCCCCEEEEEE
Confidence            999654 466788999985

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.71  E-value=6e-16  Score=130.93  Aligned_cols=156  Identities=13%  Similarity=0.105  Sum_probs=126.9

Q ss_pred             cCCCcc-CeEEEEEcCCCCEEEEEeCCCeEE-EEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         16 ASGHTG-DVMSLSLAPDMRTFVSGACDASAK-LWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        16 ~~gh~~-~V~~~~~~~~~~~l~s~s~dg~v~-~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      +.+|.+ .+..+.|+ |++.++.++.+..+. +||+.+++.. .+.+|...+..++|+|+++.+++++.++.+++||+.+
T Consensus       332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t  409 (1045)
T 1k32_A          332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET  409 (1045)
T ss_dssp             CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC
Confidence            456777 89999999 999999999888888 9999877644 4447888899999999999999999999999999988


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC----------eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF----------NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~----------~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  163 (176)
                      ++.......  +...+..++|+||+++++.++.++          .+++||+..++ ...+..|...+..++|+|+|.+|
T Consensus       410 g~~~~~~~~--~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l  486 (1045)
T 1k32_A          410 GKPTVIERS--REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNL  486 (1045)
T ss_dssp             CCEEEEEEC--SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEE
T ss_pred             CceEEeccC--CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEE
Confidence            766544321  223456789999999888776543          89999988776 56666787788889999999999


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      +.++.++..++|+
T Consensus       487 ~~~s~~~~~~~~~  499 (1045)
T 1k32_A          487 YYLSYRSLDPSPD  499 (1045)
T ss_dssp             EEEESCCCCCEEC
T ss_pred             EEEecccCCcCcc
Confidence            9998887777664

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.70  E-value=1.1e-16  Score=130.04  Aligned_cols=160  Identities=9%  Similarity=0.064  Sum_probs=117.3

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-----CeeeeEecCCCCC--------------eeEEEEccCCcE
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRD-----GSCKQTFPGHESD--------------INAVTFFPNGWA   76 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-----~~~~~~~~~h~~~--------------v~~v~~~~~~~~   76 (176)
                      +..+.+.+.+++|+|||+.|+.+ .++.|++||+.+     ++.......+...              +.++.|+|+++.
T Consensus       116 l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~  194 (706)
T 2z3z_A          116 LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSC  194 (706)
T ss_dssp             EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSE
T ss_pred             ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCE
Confidence            34466778889999999999885 689999999998     7766544444333              488999999999


Q ss_pred             EEEee---------------------------------CCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEE
Q psy15417         77 FATGS---------------------------------DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLA  123 (176)
Q Consensus        77 l~s~s---------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  123 (176)
                      |+.++                                 .+..|.+||+.+++.........+...+..+.|+|+++.+++
T Consensus       195 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~  274 (706)
T 2z3z_A          195 LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYV  274 (706)
T ss_dssp             EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEE
T ss_pred             EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEE
Confidence            99987                                 446799999987654332211112235778999999998888


Q ss_pred             EcCCC-----eEEEEeCCCc-eeeeeec-CCCc---cEEEEEEeC--CCCEEEEccCCCcEEEeC
Q psy15417        124 GYDDF-----NCNVWDSMKT-ERAGILA-GHDN---RVSCLGVTE--DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       124 g~~d~-----~i~v~d~~~~-~~~~~~~-~~~~---~i~~~~~~~--~~~~l~tg~~d~~v~vwd  176 (176)
                      +..++     .+++||..++ +...... .+..   .+..++|+|  +|.++++++.|+.++||+
T Consensus       275 ~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~  339 (706)
T 2z3z_A          275 AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYL  339 (706)
T ss_dssp             EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEE
T ss_pred             EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEE
Confidence            77665     8999998887 3322221 1222   235678999  999999999999999883

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.69  E-value=2.3e-16  Score=133.49  Aligned_cols=152  Identities=11%  Similarity=0.119  Sum_probs=125.8

Q ss_pred             CccCeEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC-CeeEEEEccCCcEEEEeeCCCcEE-EeeCCCCC
Q psy15417         19 HTGDVMSLSLA-PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNGWAFATGSDDATCR-LFDIRADQ   95 (176)
Q Consensus        19 h~~~V~~~~~~-~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~s~d~~i~-iwd~~~~~   95 (176)
                      |...+..++|+ ||++.+++++ ++.+.+|+..+++.. .+..|.. .+..++|+ ++..++.++.+..+. +|++.+.+
T Consensus       294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~  370 (1045)
T 1k32_A          294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK  370 (1045)
T ss_dssp             ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred             cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence            45578999999 9999998888 889999999887644 4666777 89999999 999999999888888 88987655


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCC-----
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDS-----  170 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~-----  170 (176)
                      .....   .+...+..++|+|+++.++++..++.+++||+.+++......+|...+..++|+|+|.+|++++.++     
T Consensus       371 ~~~l~---~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~  447 (1045)
T 1k32_A          371 AEKFE---ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD  447 (1045)
T ss_dssp             EEECC---CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred             ceEec---CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence            43222   2224577899999999999999999999999988887777768888888999999999998887654     


Q ss_pred             -----cEEEeC
Q psy15417        171 -----FLRIWN  176 (176)
Q Consensus       171 -----~v~vwd  176 (176)
                           .|++||
T Consensus       448 ~~~~~~i~l~d  458 (1045)
T 1k32_A          448 GYVMQAIHVYD  458 (1045)
T ss_dssp             SCCEEEEEEEE
T ss_pred             CCCCCeEEEEE
Confidence                 899996

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.69  E-value=6.5e-15  Score=109.03  Aligned_cols=146  Identities=6%  Similarity=0.021  Sum_probs=108.2

Q ss_pred             EEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeCCCCCe-eeEEeec
Q psy15417         27 SLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DATCRLFDIRADQE-LAMYSHD  103 (176)
Q Consensus        27 ~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~~~~-~~~~~~~  103 (176)
                      .|.+++. .+++++.++.|.+||..+++....+..+..++ .++|+|+++.++.++. ++.|.+||+.+++. .......
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~   82 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG   82 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence            4555544 57888889999999999999888887766667 9999999986666655 88999999988765 3333322


Q ss_pred             ceEeceEEEEECCCCcEEEEEcCCC---eEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCc-EEEeC
Q psy15417        104 NIICGITSVAFSRSGRLLLAGYDDF---NCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSF-LRIWN  176 (176)
Q Consensus       104 ~~~~~v~~~~~~~~~~~l~~g~~d~---~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~-v~vwd  176 (176)
                      .  .+...++|+|++++++++..++   .+.+||...++....+..+ .....++|+|+|.++ ++...++. +++|+
T Consensus        83 ~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~  157 (331)
T 3u4y_A           83 Q--SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFK  157 (331)
T ss_dssp             S--SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred             C--CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEE
Confidence            2  1233389999999888665553   8999999888877776544 345889999999754 45556677 99885

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.68  E-value=9.1e-16  Score=124.59  Aligned_cols=152  Identities=9%  Similarity=0.001  Sum_probs=114.1

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC-----CC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA-----DQ   95 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~-----~~   95 (176)
                      ..|.+++|+|| ..++.+. ++.+++||+.+++... +..+...+.+++|+|+|+.++.+ .++.|.+||+.+     ++
T Consensus        82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~  157 (706)
T 2z3z_A           82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR  157 (706)
T ss_dssp             CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred             cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence            56999999999 6555543 6999999999887554 44567778999999999998885 679999999987     65


Q ss_pred             eeeEEeecce-E-----------eceEEEEECCCCcEEEEEc---------------------------------CCCeE
Q psy15417         96 ELAMYSHDNI-I-----------CGITSVAFSRSGRLLLAGY---------------------------------DDFNC  130 (176)
Q Consensus        96 ~~~~~~~~~~-~-----------~~v~~~~~~~~~~~l~~g~---------------------------------~d~~i  130 (176)
                      .......... .           ..+..+.|+||++.|+.++                                 .+..+
T Consensus       158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l  237 (706)
T 2z3z_A          158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV  237 (706)
T ss_dssp             CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred             cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence            4332211110 0           0136789999999998876                                 44679


Q ss_pred             EEEeCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccCCC-----cEEEeC
Q psy15417        131 NVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDS-----FLRIWN  176 (176)
Q Consensus       131 ~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~-----~v~vwd  176 (176)
                      ++||+..++......  .|...+..++|+|+|..|++++.|+     .|++||
T Consensus       238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d  290 (706)
T 2z3z_A          238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYD  290 (706)
T ss_dssp             EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEE
T ss_pred             EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEE
Confidence            999998876544332  4667789999999999999877765     788885

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.67  E-value=1.1e-15  Score=113.61  Aligned_cols=148  Identities=12%  Similarity=0.111  Sum_probs=109.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCC------------CeEEEEEcCCCe---eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417         22 DVMSLSLAPDMRTFVSGACD------------ASAKLWDIRDGS---CKQTFPGHESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~d------------g~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      .+..++|+|+++++++++.+            +.|.+||+.+++   ....+.. ...+.+++|+|+++ ++.++.  .|
T Consensus        93 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i  168 (349)
T 1jmx_B           93 SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DI  168 (349)
T ss_dssp             CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEESS--SE
T ss_pred             cccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEccC--cE
Confidence            36789999999999998865            899999998854   3334443 34688999999999 555544  49


Q ss_pred             EEeeCCCCCeeeEEeecc-------------------------e------------------------------------
Q psy15417         87 RLFDIRADQELAMYSHDN-------------------------I------------------------------------  105 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~-------------------------~------------------------------------  105 (176)
                      .+||+.+++.........                         .                                    
T Consensus       169 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (349)
T 1jmx_B          169 YKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ  248 (349)
T ss_dssp             EEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEE
T ss_pred             EEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEec
Confidence            999998776544332111                         0                                    


Q ss_pred             -----EeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        106 -----ICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       106 -----~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                           ...+..+.++| ++..++++  ++.+.+||+.+++....+... ..+..++|+|++.+|++++.++.|++||
T Consensus       249 ~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d  322 (349)
T 1jmx_B          249 EFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFN  322 (349)
T ss_dssp             EEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEE
T ss_pred             ccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEe
Confidence                 00234567889 99988888  889999999888876666533 3456899999998888888899999996

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.67  E-value=7.2e-16  Score=122.84  Aligned_cols=145  Identities=11%  Similarity=-0.043  Sum_probs=111.3

Q ss_pred             EEEEEcCCCC--EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC----CcEEEeeCCCCCee
Q psy15417         24 MSLSLAPDMR--TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD----ATCRLFDIRADQEL   97 (176)
Q Consensus        24 ~~~~~~~~~~--~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~~~~~~~   97 (176)
                      ...+|+|+++  .+++++.++ +.+||+.+++.......+ .  .+++|+|+|+.+++++.+    +.|.+||+.+++..
T Consensus       113 ~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~  188 (582)
T 3o4h_A          113 RILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR  188 (582)
T ss_dssp             EEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred             eeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence            3557777775  455555554 559999998766554433 3  889999999999988877    78999999877654


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCCC--eEEEEeCCCceeeeeecCCCccEEEEE--------EeCCCCEEEEcc
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDF--NCNVWDSMKTERAGILAGHDNRVSCLG--------VTEDGMAVATGS  167 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~--~i~v~d~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~tg~  167 (176)
                      ......   ..+...+|+|||+.++++..++  +|++||+..++.. ....|...+..++        |+|+|..+++++
T Consensus       189 ~l~~~~---~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~  264 (582)
T 3o4h_A          189 VFDSGE---GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVAR  264 (582)
T ss_dssp             EECCSS---CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred             EeecCC---CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEE
Confidence            332222   3467899999999999888888  8999999887776 6666766666566        999998889999


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      .|+++++|+
T Consensus       265 ~~g~~~l~~  273 (582)
T 3o4h_A          265 REGRSAVFI  273 (582)
T ss_dssp             ETTEEEEEE
T ss_pred             cCCcEEEEE
Confidence            999999994

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.67  E-value=4.3e-15  Score=109.74  Aligned_cols=141  Identities=13%  Similarity=0.114  Sum_probs=108.2

Q ss_pred             CEEEEEeCCCeEEEEEcCCCeeeeEecCCCC--CeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCeeeEEeecc---eE
Q psy15417         33 RTFVSGACDASAKLWDIRDGSCKQTFPGHES--DINAVTFFPNGWAF-ATGSDDATCRLFDIRADQELAMYSHDN---II  106 (176)
Q Consensus        33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~---~~  106 (176)
                      .++++++.++.|.+||..+++....+.....  .+..++|+|+++.+ +++..++.|.+||+.+++.+.......   ..
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~   81 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence            4788999999999999999998887764332  47889999999755 566667899999998877665444322   11


Q ss_pred             eceEEEEECCCCcEEEEEc------------CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417        107 CGITSVAFSRSGRLLLAGY------------DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       107 ~~v~~~~~~~~~~~l~~g~------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      ..+..++|+|+++.++++.            .++.+.+||..+++....+.. ...+..++|+|++.+|+++  ++.|++
T Consensus        82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~  158 (337)
T 1pby_B           82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV  158 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred             ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence            2355789999998887775            578999999988777666654 3446778899999988777  578998


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       159 ~d  160 (337)
T 1pby_B          159 MD  160 (337)
T ss_dssp             EE
T ss_pred             EE
Confidence            86

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.67  E-value=1.9e-15  Score=112.28  Aligned_cols=147  Identities=10%  Similarity=0.074  Sum_probs=108.7

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417         26 LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~  103 (176)
                      +++++++.++++++.+++|.+||..+++....+..+. ..+..++|+|+++.+ ++...++.|.+||+.+++........
T Consensus         5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~   84 (349)
T 1jmx_B            5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   84 (349)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence            4567888899999999999999999999888887543 257899999999755 55567889999999887665444322


Q ss_pred             ce----EeceEEEEECCCCcEEEEEcCC------------CeEEEEeCCCcee---eeeecCCCccEEEEEEeCCCCEEE
Q psy15417        104 NI----ICGITSVAFSRSGRLLLAGYDD------------FNCNVWDSMKTER---AGILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus       104 ~~----~~~v~~~~~~~~~~~l~~g~~d------------~~i~v~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      ..    ...+..++|+|+++.++++..+            +.+.+||+.+++.   ..... +...+.+++|+|++. ++
T Consensus        85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~  162 (349)
T 1jmx_B           85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LY  162 (349)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EE
T ss_pred             cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EE
Confidence            11    1235678999999988888754            8999999876432   22232 334577889999999 44


Q ss_pred             EccCCCcEEEeC
Q psy15417        165 TGSWDSFLRIWN  176 (176)
Q Consensus       165 tg~~d~~v~vwd  176 (176)
                      .++.+  |++||
T Consensus       163 ~~~~~--i~~~d  172 (349)
T 1jmx_B          163 VAGPD--IYKMD  172 (349)
T ss_dssp             EESSS--EEEEC
T ss_pred             EccCc--EEEEe
Confidence            44443  88886

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.66  E-value=4.9e-16  Score=126.46  Aligned_cols=140  Identities=16%  Similarity=0.167  Sum_probs=105.0

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC---CeeEEEEccCCcEEEEeeC---------CCcEEEeeCC
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES---DINAVTFFPNGWAFATGSD---------DATCRLFDIR   92 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~s~---------d~~i~iwd~~   92 (176)
                      .++|+|+++++++ +.|++|++||+.+++....+..|..   .+.+++|+|||+.|+.++.         ++.+++||+.
T Consensus        20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~   98 (719)
T 1z68_A           20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS   98 (719)
T ss_dssp             CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence            6789999965555 4699999999999987776665543   4899999999999988876         7899999998


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee-cCCCccE-----------------EEE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNRV-----------------SCL  154 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~-~~~~~~i-----------------~~~  154 (176)
                      +++.+......   ..+..++|+|||+.++.+. ++.|++|++..++..... .++...+                 ..+
T Consensus        99 ~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~  174 (719)
T 1z68_A           99 NGEFVRGNELP---RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL  174 (719)
T ss_dssp             TTEECCSSCCC---SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred             CCccccceecC---cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence            76541101111   2466799999999888875 779999998776554322 2332222                 478


Q ss_pred             EEeCCCCEEEEccCC
Q psy15417        155 GVTEDGMAVATGSWD  169 (176)
Q Consensus       155 ~~~~~~~~l~tg~~d  169 (176)
                      +|+|||+.|+.++.|
T Consensus       175 ~wSPDG~~la~~~~d  189 (719)
T 1z68_A          175 WWSPNGKFLAYAEFN  189 (719)
T ss_dssp             EECTTSSEEEEEEEE
T ss_pred             EECCCCCEEEEEEEC
Confidence            999999999988765

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.65  E-value=8.2e-14  Score=101.38  Aligned_cols=154  Identities=17%  Similarity=0.182  Sum_probs=115.9

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      +...+.++++++++.++++...++.|.+||.. ++....+.  ++...+.+++++|+++.+++...++.|.+||.. ++.
T Consensus       119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~  196 (286)
T 1q7f_A          119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQY  196 (286)
T ss_dssp             TCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCE
T ss_pred             cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCE
Confidence            44568899999999988888888999999964 55555554  344568999999999988888888999999974 344


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcCCC-eEEEEeCCCceeeeeecCCC--ccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDF-NCNVWDSMKTERAGILAGHD--NRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~-~i~v~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      +..+........+..+++++++.++++...++ .|++||. .++.+..+..+.  .....++++|+|..+++ +.|++|+
T Consensus       197 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~  274 (286)
T 1q7f_A          197 LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLY  274 (286)
T ss_dssp             EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEE
T ss_pred             EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEE
Confidence            44433222113466899999999988888775 9999994 555555554443  24678999999987777 5789999


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      +|+
T Consensus       275 v~~  277 (286)
T 1q7f_A          275 IYR  277 (286)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            995

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.64  E-value=2.9e-14  Score=107.63  Aligned_cols=158  Identities=9%  Similarity=0.019  Sum_probs=109.1

Q ss_pred             CccCeEEEEEcCCCCEEEEEeC-CCeEEEEEcC-CCeee--eEec--CCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGAC-DASAKLWDIR-DGSCK--QTFP--GHESDINAVTFFPNGWAFATGSD-DATCRLFDI   91 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~-~~~~~--~~~~--~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~   91 (176)
                      +...+.+++|+|++++++++.. ++.|.+||++ +++..  ..+.  .|...+..++|+|+++.+++++. ++.+.+|++
T Consensus       143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~  222 (365)
T 1jof_A          143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI  222 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence            4567899999999998887664 6789999998 77643  3343  24567899999999998877765 688999986


Q ss_pred             C--CCCeee---EEe-ecce---Ee-------ceEEEE-ECCCCcEEEEEcCCC------eEEEEeCC-Cceeee---ee
Q psy15417         92 R--ADQELA---MYS-HDNI---IC-------GITSVA-FSRSGRLLLAGYDDF------NCNVWDSM-KTERAG---IL  144 (176)
Q Consensus        92 ~--~~~~~~---~~~-~~~~---~~-------~v~~~~-~~~~~~~l~~g~~d~------~i~v~d~~-~~~~~~---~~  144 (176)
                      .  +++...   ... ....   ..       .+..++ |+|++++++++..+.      ++.+|++. .++...   ..
T Consensus       223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~  302 (365)
T 1jof_A          223 DPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLS  302 (365)
T ss_dssp             CTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEE
T ss_pred             eCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeee
Confidence            5  333211   111 1100   01       367899 999999877665332      89999985 444332   13


Q ss_pred             cCCCccEEEEEEeC---CCCEEEEccCC-CcEEEeC
Q psy15417        145 AGHDNRVSCLGVTE---DGMAVATGSWD-SFLRIWN  176 (176)
Q Consensus       145 ~~~~~~i~~~~~~~---~~~~l~tg~~d-~~v~vwd  176 (176)
                      ..+......++|+|   +|.+|++++.+ +.|++|+
T Consensus       303 ~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~  338 (365)
T 1jof_A          303 PTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR  338 (365)
T ss_dssp             ECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred             ecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence            23434455688999   89999888764 8999995

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.64  E-value=2.4e-15  Score=119.82  Aligned_cols=143  Identities=13%  Similarity=0.016  Sum_probs=111.7

Q ss_pred             EEEEEcCCCCEEEEEeCC----CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCee
Q psy15417         24 MSLSLAPDMRTFVSGACD----ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQEL   97 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~d----g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~   97 (176)
                      .++.|+|||+.+++++.+    +.|++||+.+++.. .+..|...+..++|+|||+.|+++..++  .|.+||+.+++..
T Consensus       153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~  231 (582)
T 3o4h_A          153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE  231 (582)
T ss_dssp             CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred             ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence            688999999999988877    78999999988754 6778888899999999999999888888  8999999877654


Q ss_pred             eEEeecceEeceEEEE--------ECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         98 AMYSHDNIICGITSVA--------FSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~--------~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                       ....  +...+..+.        |+||+.+++++..++++++|++  ++...   .....+..++|+ ++..+++++.+
T Consensus       232 -~~~~--~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~  302 (582)
T 3o4h_A          232 -DLEL--PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSL  302 (582)
T ss_dssp             -ECCC--SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEET
T ss_pred             -EccC--CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCC
Confidence             3221  111222334        9999998999999999999998  55443   234678889999 88888888776


Q ss_pred             Cc---EEEeC
Q psy15417        170 SF---LRIWN  176 (176)
Q Consensus       170 ~~---v~vwd  176 (176)
                      .+   +.+||
T Consensus       303 ~~p~~l~~~d  312 (582)
T 3o4h_A          303 STPPRIVSLP  312 (582)
T ss_dssp             TEEEEEEEET
T ss_pred             CCCCeEEEEc
Confidence            54   44443

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.62  E-value=1.1e-15  Score=124.44  Aligned_cols=150  Identities=17%  Similarity=0.150  Sum_probs=108.2

Q ss_pred             eEEEEEcCCCCEEEEEeC---------CCeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         23 VMSLSLAPDMRTFVSGAC---------DASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~---------dg~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      |.+++|||||++|+.++.         ++++++||+.+++.+  ..+   ...+..++|+|+|+.|+.+. ++.|++|++
T Consensus        62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~  137 (719)
T 1z68_A           62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQR  137 (719)
T ss_dssp             CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred             eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence            889999999999998876         789999999998763  222   25688999999999998886 689999999


Q ss_pred             CCCCeeeEEe--ecceE--------------eceEEEEECCCCcEEEEEcCCC---------------------------
Q psy15417         92 RADQELAMYS--HDNII--------------CGITSVAFSRSGRLLLAGYDDF---------------------------  128 (176)
Q Consensus        92 ~~~~~~~~~~--~~~~~--------------~~v~~~~~~~~~~~l~~g~~d~---------------------------  128 (176)
                      .+++......  .....              .....+.|+|||+.|+.++.|.                           
T Consensus       138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~  217 (719)
T 1z68_A          138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA  217 (719)
T ss_dssp             TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred             CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence            7765433211  11000              0113689999999998876542                           


Q ss_pred             -------eEEEEeCCCceee--------eeecCCCccEEEEEEeCCCCEEEEccC--CC--cEEEeC
Q psy15417        129 -------NCNVWDSMKTERA--------GILAGHDNRVSCLGVTEDGMAVATGSW--DS--FLRIWN  176 (176)
Q Consensus       129 -------~i~v~d~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~l~tg~~--d~--~v~vwd  176 (176)
                             .+++||+..++..        ..+.+|...+..++|+|++..+++...  ++  .|.+||
T Consensus       218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d  284 (719)
T 1z68_A          218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD  284 (719)
T ss_dssp             TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred             CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence                   7889998876542        123467788999999999877766432  22  355554

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.61  E-value=3.4e-13  Score=100.45  Aligned_cols=156  Identities=11%  Similarity=0.072  Sum_probs=119.9

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCC------------------------CeEEEEEcCCCeeeeEec-CCCCCeeEEEEccCC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACD------------------------ASAKLWDIRDGSCKQTFP-GHESDINAVTFFPNG   74 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~d------------------------g~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~   74 (176)
                      -+.+.+++++|+++++++.+.+                        ++|.+||..+++....+. ++-..+.+++++|++
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g  102 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG  102 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence            4779999999999999988877                        479999999998776665 344678999999999


Q ss_pred             cEEEEeeCCCcEEEeeCCCCC-eeeEEee-------cceEeceEEEEECC-CCcEEEEEc-CCCeEEEEeCCCceeeeee
Q psy15417         75 WAFATGSDDATCRLFDIRADQ-ELAMYSH-------DNIICGITSVAFSR-SGRLLLAGY-DDFNCNVWDSMKTERAGIL  144 (176)
Q Consensus        75 ~~l~s~s~d~~i~iwd~~~~~-~~~~~~~-------~~~~~~v~~~~~~~-~~~~l~~g~-~d~~i~v~d~~~~~~~~~~  144 (176)
                      +.+++...++.|++||..... .+..+..       .........++++| ++.++++.+ .++.|++|+ ..++....+
T Consensus       103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~  181 (329)
T 3fvz_A          103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW  181 (329)
T ss_dssp             CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred             CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence            998988889999999975442 3333321       11222467899999 788888886 689999999 556655555


Q ss_pred             cC----------CCccEEEEEEeCC-CCEEEEccCCCcEEEeC
Q psy15417        145 AG----------HDNRVSCLGVTED-GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       145 ~~----------~~~~i~~~~~~~~-~~~l~tg~~d~~v~vwd  176 (176)
                      ..          +......++++|+ +.++++...+++|++||
T Consensus       182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~  224 (329)
T 3fvz_A          182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFK  224 (329)
T ss_dssp             CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEE
Confidence            32          2234788999998 77888888899999985

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.60  E-value=5.9e-14  Score=105.92  Aligned_cols=154  Identities=8%  Similarity=0.011  Sum_probs=108.4

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCeeeeEec--CCCCCeeEEEEccCCcE--EEEee-------------C
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIR-DGSCKQTFP--GHESDINAVTFFPNGWA--FATGS-------------D   82 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~-~~~~~~~~~--~h~~~v~~v~~~~~~~~--l~s~s-------------~   82 (176)
                      ..+..++|+|++++|++++.+ .|.+|++. +++......  .+ +.+.+++|+|+++.  +++++             .
T Consensus        40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~  117 (365)
T 1jof_A           40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF  117 (365)
T ss_dssp             CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred             CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence            457789999999999999888 99999997 777654332  12 23567899999984  55553             6


Q ss_pred             CCcEEEeeCCC-CCeeeEEeec--ceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCC-Cceee--eeec--CCCccEEE
Q psy15417         83 DATCRLFDIRA-DQELAMYSHD--NIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSM-KTERA--GILA--GHDNRVSC  153 (176)
Q Consensus        83 d~~i~iwd~~~-~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~-~~~~~--~~~~--~~~~~i~~  153 (176)
                      ++++.+|++.. ++........  .....+..++|+|++++++++. .+..|++|++. +++..  ..+.  .|......
T Consensus       118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~  197 (365)
T 1jof_A          118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW  197 (365)
T ss_dssp             CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred             CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence            89999999864 4332222210  0113577899999999777654 46799999987 55432  2232  23556889


Q ss_pred             EEEeCCCCEEEEccC-CCcEEEeC
Q psy15417        154 LGVTEDGMAVATGSW-DSFLRIWN  176 (176)
Q Consensus       154 ~~~~~~~~~l~tg~~-d~~v~vwd  176 (176)
                      ++|+|+|+++++++. ++.|.+|+
T Consensus       198 ~~~spdg~~l~v~~~~~~~v~v~~  221 (365)
T 1jof_A          198 VAMHPTGNYLYALMEAGNRICEYV  221 (365)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEE
T ss_pred             eEECCCCCEEEEEECCCCeEEEEE
Confidence            999999998876654 67898873

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.60  E-value=8.5e-14  Score=103.75  Aligned_cols=158  Identities=11%  Similarity=0.182  Sum_probs=118.8

Q ss_pred             CCccCeEEEEEcC-CCCEEEEEe-CCCeEEEEEcCCCeeeeEecCC----------CCCeeEEEEccC-CcEEEEeeCCC
Q psy15417         18 GHTGDVMSLSLAP-DMRTFVSGA-CDASAKLWDIRDGSCKQTFPGH----------ESDINAVTFFPN-GWAFATGSDDA   84 (176)
Q Consensus        18 gh~~~V~~~~~~~-~~~~l~s~s-~dg~v~~wd~~~~~~~~~~~~h----------~~~v~~v~~~~~-~~~l~s~s~d~   84 (176)
                      ++......++|+| ++.++++.+ .++.|++|| .+++....+...          -....+++++|+ +..+++...++
T Consensus       140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~  218 (329)
T 3fvz_A          140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG  218 (329)
T ss_dssp             TCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT
T ss_pred             cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC
Confidence            4555788999999 788888886 689999999 567766666422          234889999998 88888888889


Q ss_pred             cEEEeeCCCCCeeeEEeecceEeceEEEEECC------CCcEEEEEcCCCeEEEEeCCCceeeeee---cCCCccEEEEE
Q psy15417         85 TCRLFDIRADQELAMYSHDNIICGITSVAFSR------SGRLLLAGYDDFNCNVWDSMKTERAGIL---AGHDNRVSCLG  155 (176)
Q Consensus        85 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~g~~d~~i~v~d~~~~~~~~~~---~~~~~~i~~~~  155 (176)
                      .|++|+..+++.+..+........+..+.++|      ++..+++...+.++++|+...++.+..+   .++......++
T Consensus       219 ~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia  298 (329)
T 3fvz_A          219 RIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIV  298 (329)
T ss_dssp             EEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEE
T ss_pred             EEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEE
Confidence            99999998676665553322223456788888      3333333344568999998888887776   35667789999


Q ss_pred             EeCCCCEEEEccCCCcEEEeC
Q psy15417        156 VTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       156 ~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++|+|..+++...+++|++|+
T Consensus       299 ~~~dG~lyvad~~~~~I~~~~  319 (329)
T 3fvz_A          299 ASEDGTVYIGDAHTNTVWKFT  319 (329)
T ss_dssp             ECTTSEEEEEESSSCCEEEEE
T ss_pred             ECCCCCEEEEECCCCEEEEEe
Confidence            999998888999999999985

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.59  E-value=2.2e-13  Score=102.21  Aligned_cols=156  Identities=13%  Similarity=0.084  Sum_probs=106.2

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCC--Ce--eeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEe
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACD----ASAKLWDIRD--GS--CKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLF   89 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~d----g~v~~wd~~~--~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iw   89 (176)
                      |...+..++|+|++++|++++.+    +.+.+|+++.  ++  .+.....+......+++  +++.+++++ .++.+.+|
T Consensus        48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~  125 (361)
T 3scy_A           48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF  125 (361)
T ss_dssp             ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred             cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence            45666779999999999999886    7999998865  54  33444445566777887  777666665 57899999


Q ss_pred             eCCCCCeee----EEeecc--------eEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCce-------e------eee
Q psy15417         90 DIRADQELA----MYSHDN--------IICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTE-------R------AGI  143 (176)
Q Consensus        90 d~~~~~~~~----~~~~~~--------~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~-------~------~~~  143 (176)
                      ++.....+.    ...+..        ....+..++|+|+++.+ ++...++.+++|++....       .      ...
T Consensus       126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~  205 (361)
T 3scy_A          126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF  205 (361)
T ss_dssp             EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred             EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence            986543321    111111        01124679999999855 555568899999865432       1      111


Q ss_pred             ecCCCccEEEEEEeCCCCEEEEcc-CCCcEEEeC
Q psy15417        144 LAGHDNRVSCLGVTEDGMAVATGS-WDSFLRIWN  176 (176)
Q Consensus       144 ~~~~~~~i~~~~~~~~~~~l~tg~-~d~~v~vwd  176 (176)
                      ...+......++|+|+|.++++++ .++.|++||
T Consensus       206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~  239 (361)
T 3scy_A          206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR  239 (361)
T ss_dssp             ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred             ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence            223344568899999999776665 688999995

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.58  E-value=1.4e-13  Score=103.98  Aligned_cols=153  Identities=13%  Similarity=0.008  Sum_probs=111.4

Q ss_pred             cCCCccCeEE-----EEEcCCCCEEEEEeC-CCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEE
Q psy15417         16 ASGHTGDVMS-----LSLAPDMRTFVSGAC-DAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCR   87 (176)
Q Consensus        16 ~~gh~~~V~~-----~~~~~~~~~l~s~s~-dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~   87 (176)
                      ++.|......     .+|+|||+.|+.++. ++.  +.+||+.+++......++...+..+.|+|+++.|+.++.++.+.
T Consensus        26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~  105 (388)
T 3pe7_A           26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLM  105 (388)
T ss_dssp             CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEE
T ss_pred             ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEE
Confidence            4556555555     789999998888887 664  88889999987777776766666788999999999999999999


Q ss_pred             EeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEE----------------------cCCCeEEEEeCCCceeeeeec
Q psy15417         88 LFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAG----------------------YDDFNCNVWDSMKTERAGILA  145 (176)
Q Consensus        88 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g----------------------~~d~~i~v~d~~~~~~~~~~~  145 (176)
                      +||+.+++..................++|++..++..                      ..+..|.+||+.+++... +.
T Consensus       106 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~  184 (388)
T 3pe7_A          106 RVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-IL  184 (388)
T ss_dssp             EEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EE
T ss_pred             EEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-ee
Confidence            9999887765554433221111223458999887642                      244679999988775433 33


Q ss_pred             CCCccEEEEEEeC-CCCEEEEccCC
Q psy15417        146 GHDNRVSCLGVTE-DGMAVATGSWD  169 (176)
Q Consensus       146 ~~~~~i~~~~~~~-~~~~l~tg~~d  169 (176)
                      .+...+..++|+| +|..|+.++.+
T Consensus       185 ~~~~~~~~~~~sp~dg~~l~~~~~~  209 (388)
T 3pe7_A          185 QENQWLGHPIYRPYDDSTVAFCHEG  209 (388)
T ss_dssp             EESSCEEEEEEETTEEEEEEEEECS
T ss_pred             cCCccccccEECCCCCCEEEEEEec
Confidence            4556788999999 99888766653

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.58  E-value=8.6e-14  Score=112.22  Aligned_cols=153  Identities=8%  Similarity=0.016  Sum_probs=112.4

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCC----------CeEEEEEcCC------CeeeeEec-CCCCCeeEEEEccCCcEEEEee
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACD----------ASAKLWDIRD------GSCKQTFP-GHESDINAVTFFPNGWAFATGS   81 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~d----------g~v~~wd~~~------~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s   81 (176)
                      |...+..++|+|||+.|+.++.+          ..|.+||+.+      ++. ..+. .+...+..++|+|||+.|+.++
T Consensus       128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~  206 (662)
T 3azo_A          128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLA  206 (662)
T ss_dssp             TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred             CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEE
Confidence            67788999999999999988877          5799999987      553 4555 5566788899999999998777


Q ss_pred             CCC--------cEEEeeCC-CC---CeeeEEeecceEeceEEEEECCCCcEEEEEcCCC--eEEEEeCCCceeeeeecCC
Q psy15417         82 DDA--------TCRLFDIR-AD---QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF--NCNVWDSMKTERAGILAGH  147 (176)
Q Consensus        82 ~d~--------~i~iwd~~-~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~--~i~v~d~~~~~~~~~~~~~  147 (176)
                      .++        .|.+||+. ++   +........  ...+..+.|+||+++++++..++  .+.+||...++.......+
T Consensus       207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~--~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~  284 (662)
T 3azo_A          207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP--EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE  284 (662)
T ss_dssp             ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET--TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS
T ss_pred             CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC--CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc
Confidence            553        69999998 45   222222211  13467889999999888888888  6667776555544333333


Q ss_pred             Ccc--------EEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        148 DNR--------VSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       148 ~~~--------i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ...        +..++|+|++.++++++. +.++||
T Consensus       285 ~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~  319 (662)
T 3azo_A          285 EEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLG  319 (662)
T ss_dssp             SBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred             ccccCccccccCceEeEeCCCEEEEEEEc-CccEEE
Confidence            221        456889999999999988 999988

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.58  E-value=1.2e-14  Score=119.13  Aligned_cols=149  Identities=15%  Similarity=0.135  Sum_probs=109.0

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCC-----eeEEEEccCCcEEEEeeCC---------CcE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESD-----INAVTFFPNGWAFATGSDD---------ATC   86 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~s~d---------~~i   86 (176)
                      .....+.|+||+++++++  |++|++||+.++++...+.+|...     ...+.|+|||+.++.++.+         +.+
T Consensus        17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~   94 (740)
T 4a5s_A           17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY   94 (740)
T ss_dssp             CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred             ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence            345689999999988886  999999999999988888877632     2448899999999998876         455


Q ss_pred             EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccE--------------
Q psy15417         87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRV--------------  151 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i--------------  151 (176)
                      .+||+.+++........   ..+...+|+|||+.++.+ .++.|++|++..++... +..++...+              
T Consensus        95 ~~~d~~~~~~~~l~~~~---~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~  170 (740)
T 4a5s_A           95 DIYDLNKRQLITEERIP---NNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF  170 (740)
T ss_dssp             EEEETTTTEECCSSCCC---TTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred             EEEECCCCcEEEcccCC---CcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence            69999887643322222   356789999999988777 46799999987765433 222333222              


Q ss_pred             ---EEEEEeCCCCEEEEccCCCc-EEEe
Q psy15417        152 ---SCLGVTEDGMAVATGSWDSF-LRIW  175 (176)
Q Consensus       152 ---~~~~~~~~~~~l~tg~~d~~-v~vw  175 (176)
                         ..++|+|||+.||.++.|.+ +++|
T Consensus       171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~  198 (740)
T 4a5s_A          171 SAYSALWWSPNGTFLAYAQFNDTEVPLI  198 (740)
T ss_dssp             SSSBCEEECTTSSEEEEEEEECTTCCEE
T ss_pred             CCCcceEECCCCCEEEEEEEcccCCceE
Confidence               24789999999998765443 4444

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.57  E-value=1.6e-12  Score=94.48  Aligned_cols=156  Identities=11%  Similarity=0.147  Sum_probs=116.3

Q ss_pred             CCccCeEEEEE-cCCCCEEEEEeC-CCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         18 GHTGDVMSLSL-APDMRTFVSGAC-DASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        18 gh~~~V~~~~~-~~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +|...+..+++ .+++.++++... ++.|.+|| .+++....+.. +...+.++++.|+++.+++...++.|.+||.. +
T Consensus        74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g  151 (286)
T 1q7f_A           74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-G  151 (286)
T ss_dssp             TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-C
Confidence            45567889999 467776666643 88999999 56776666643 34568999999999988888888999999964 4


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC--CccEEEEEEeCCCCEEEEccCCC-c
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH--DNRVSCLGVTEDGMAVATGSWDS-F  171 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~tg~~d~-~  171 (176)
                      +.+..+........+..++++|++.++++...++.|++||. .++.+..+..+  ......++++++|.++++...++ .
T Consensus       152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~  230 (286)
T 1q7f_A          152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN  230 (286)
T ss_dssp             CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred             CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence            44444432222234678999999998888888999999996 45555555433  35678999999999888887776 9


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      |++||
T Consensus       231 i~~~~  235 (286)
T 1q7f_A          231 LTIFT  235 (286)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            99986

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.55  E-value=2e-12  Score=95.92  Aligned_cols=159  Identities=11%  Similarity=0.070  Sum_probs=112.8

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC----CcEEEeeCC
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD----ATCRLFDIR   92 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~~   92 (176)
                      .++...+.+++|++++++++++..++.|.+||.++++.......+...+.+++++|+++.+++...+    +.|.+||..
T Consensus        41 ~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~  120 (333)
T 2dg1_A           41 SKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN  120 (333)
T ss_dssp             ESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred             eccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence            3455667899999999988888889999999999887655444566789999999999888877766    689999987


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcC------CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYD------DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-AT  165 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~t  165 (176)
                      +...............+..+.++|++.++++...      .+.+..+|...++... +.........++|+|++..| ++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~  199 (333)
T 2dg1_A          121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVT  199 (333)
T ss_dssp             SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEE
T ss_pred             CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEE
Confidence            6654322221111235778999999998877654      3556667754433322 22223346789999999755 45


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      .+.++.|.+||
T Consensus       200 ~~~~~~i~~~d  210 (333)
T 2dg1_A          200 ETTANRLHRIA  210 (333)
T ss_dssp             EGGGTEEEEEE
T ss_pred             eCCCCeEEEEE
Confidence            55677888875

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.52  E-value=1.6e-12  Score=99.03  Aligned_cols=133  Identities=11%  Similarity=0.035  Sum_probs=106.1

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      +.. |+.++|  ++..|+++ .++.|++||+++-......+.|..++.++.+.+.  .++.+..||.+.+||+++++...
T Consensus        87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~  160 (388)
T 1xip_A           87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ  160 (388)
T ss_dssp             CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred             CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc
Confidence            556 999999  88999998 7899999999876655566677888988776654  38999999999999998766532


Q ss_pred             EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee--eeee------c---CCCccEEEEEEeCCCCEEEE
Q psy15417         99 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER--AGIL------A---GHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~--~~~~------~---~~~~~i~~~~~~~~~~~l~t  165 (176)
                            ....|.+++|+|+|  ++.|..||++++|+....+.  ..++      .   +|...|.++.|.+++.++++
T Consensus       161 ------~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          161 ------LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             ------EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             ------ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence                  23478999999999  67788999999998766553  3344      2   36788999999999888775

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.51  E-value=3.3e-12  Score=93.44  Aligned_cols=156  Identities=8%  Similarity=-0.021  Sum_probs=115.4

Q ss_pred             CCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         17 SGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..+.....++.|+|+++ +++++..++.|..||..++  ...+..+...+.+++++|+++.+++...++.|.+||..+++
T Consensus        24 ~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~  101 (296)
T 3e5z_A           24 ADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE  101 (296)
T ss_dssp             ECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred             ecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence            34556778999999998 7888888999999999887  56677777889999999999988887777899999987665


Q ss_pred             eeeEEee-cce-EeceEEEEECCCCcEEEE----Ec-------------CCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417         96 ELAMYSH-DNI-ICGITSVAFSRSGRLLLA----GY-------------DDFNCNVWDSMKTERAGILAGHDNRVSCLGV  156 (176)
Q Consensus        96 ~~~~~~~-~~~-~~~v~~~~~~~~~~~l~~----g~-------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~  156 (176)
                      ....... ... ...++.++++|+|+++++    |.             ..+.+..++.. ++ ......+......++|
T Consensus       102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~  179 (296)
T 3e5z_A          102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAF  179 (296)
T ss_dssp             EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEE
T ss_pred             EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEE
Confidence            4332211 111 123567899999998887    33             13456666644 33 3334445566788999


Q ss_pred             eCCCCEEEEccCCCcEEEeC
Q psy15417        157 TEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       157 ~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +|++..+++.+.++.|++||
T Consensus       180 s~dg~~lv~~~~~~~i~~~~  199 (296)
T 3e5z_A          180 LPSGNLLVSDTGDNATHRYC  199 (296)
T ss_dssp             CTTSCEEEEETTTTEEEEEE
T ss_pred             CCCCCEEEEeCCCCeEEEEE
Confidence            99999888888888998885

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.50  E-value=1.9e-12  Score=94.47  Aligned_cols=142  Identities=13%  Similarity=0.038  Sum_probs=110.4

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEec
Q psy15417         30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICG  108 (176)
Q Consensus        30 ~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~  108 (176)
                      .+++++++++.|+.|.+||.++++.++++..+. ..+.++.+.|+|+.++  +.++.+..||. +++.+..+..... ..
T Consensus         3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~-~~   78 (276)
T 3no2_A            3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAG-CE   78 (276)
T ss_dssp             CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTT-CE
T ss_pred             CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC-cc
Confidence            356889999999999999999999999998876 5789999999999888  45678999998 7776666554311 24


Q ss_pred             eEEEEECCCCcEEEEEcC-CCeEEEEeCCCceeeeeec------CCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        109 ITSVAFSRSGRLLLAGYD-DFNCNVWDSMKTERAGILA------GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       109 v~~~~~~~~~~~l~~g~~-d~~i~v~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.++.+.|++.++++.+. ++.+..+|. .++.+..+.      .+......+++.++|+++++...++.|..||
T Consensus        79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d  152 (276)
T 3no2_A           79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIA  152 (276)
T ss_dssp             EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEEC
T ss_pred             ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEEC
Confidence            667889999999999877 778888884 566555443      1212334457889999999999999999986

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.49  E-value=4e-13  Score=110.08  Aligned_cols=151  Identities=14%  Similarity=0.050  Sum_probs=105.9

Q ss_pred             EEEEEcCCCCEEEEEeCC---------CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         24 MSLSLAPDMRTFVSGACD---------ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~d---------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ....||||+++++.++.+         +.+.+||+.++++. .+..|...+...+|+|+|+.|+.++ ++.|.+|++.++
T Consensus        65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~  142 (740)
T 4a5s_A           65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL  142 (740)
T ss_dssp             CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred             cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC
Confidence            447889999999998876         55679999999855 4667788899999999999998885 689999998776


Q ss_pred             CeeeEEe--ecceE--------------eceEEEEECCCCcEEEEEcCC-------------------------------
Q psy15417         95 QELAMYS--HDNII--------------CGITSVAFSRSGRLLLAGYDD-------------------------------  127 (176)
Q Consensus        95 ~~~~~~~--~~~~~--------------~~v~~~~~~~~~~~l~~g~~d-------------------------------  127 (176)
                      +......  .....              .....+.|+|||+.|+....|                               
T Consensus       143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G  222 (740)
T 4a5s_A          143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG  222 (740)
T ss_dssp             CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred             ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence            5432211  11000              011247899999988776421                               


Q ss_pred             -----CeEEEEeCCC---ce--eeeeec------CCCccEEEEEEeCCCCEEEEc----cCCCcEEEeC
Q psy15417        128 -----FNCNVWDSMK---TE--RAGILA------GHDNRVSCLGVTEDGMAVATG----SWDSFLRIWN  176 (176)
Q Consensus       128 -----~~i~v~d~~~---~~--~~~~~~------~~~~~i~~~~~~~~~~~l~tg----~~d~~v~vwd  176 (176)
                           .++++||+..   ++  ....+.      +|...+..++|+|+|+.++..    +.+..|++||
T Consensus       223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d  291 (740)
T 4a5s_A          223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICD  291 (740)
T ss_dssp             SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEE
T ss_pred             CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEE
Confidence                 1588899877   62  222222      377789999999999865543    3334677775

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.48  E-value=9.7e-13  Score=99.44  Aligned_cols=153  Identities=9%  Similarity=0.112  Sum_probs=110.9

Q ss_pred             CccCeEEEEEcCCCCEEEEEeC----------CCeEEEEEcCCCeeeeEecCC------CCCeeEEEEccCCcEEEEeeC
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGAC----------DASAKLWDIRDGSCKQTFPGH------ESDINAVTFFPNGWAFATGSD   82 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~----------dg~v~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~~~l~s~s~   82 (176)
                      +..+  .+.|+||++++++++.          +++|.+||..+.+.+.++...      ......++|+|++++++++..
T Consensus        50 g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~  127 (361)
T 2oiz_A           50 AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA  127 (361)
T ss_dssp             CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE
T ss_pred             CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECC
Confidence            4444  7999999999998863          667999999998887777532      234678999999999988864


Q ss_pred             --CCcEEEeeCCCCCeeeE-Eee------------------------------c--ceEe--------------------
Q psy15417         83 --DATCRLFDIRADQELAM-YSH------------------------------D--NIIC--------------------  107 (176)
Q Consensus        83 --d~~i~iwd~~~~~~~~~-~~~------------------------------~--~~~~--------------------  107 (176)
                        +++|.+||+.+.+.+.. ...                              .  ....                    
T Consensus       128 ~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  207 (361)
T 2oiz_A          128 SPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAP  207 (361)
T ss_dssp             SSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCC
T ss_pred             CCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEe
Confidence              57899999866543322 000                              0  0000                    


Q ss_pred             -----------------------------------------------ceEEEEECCCCcEEEEEcC-----------CCe
Q psy15417        108 -----------------------------------------------GITSVAFSRSGRLLLAGYD-----------DFN  129 (176)
Q Consensus       108 -----------------------------------------------~v~~~~~~~~~~~l~~g~~-----------d~~  129 (176)
                                                                     +...++|+|++..+++...           ...
T Consensus       208 ~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~  287 (361)
T 2oiz_A          208 ALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAE  287 (361)
T ss_dssp             EECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSE
T ss_pred             cccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCce
Confidence                                                           0001567888666555432           347


Q ss_pred             EEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        130 CNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       130 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.+||..+.+.+..+..+.  ...++|+|+|++|++++. +.|.+||
T Consensus       288 v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D  331 (361)
T 2oiz_A          288 IWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYD  331 (361)
T ss_dssp             EEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEE
T ss_pred             EEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEE
Confidence            9999999999998888776  789999999999988876 9999996

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.48  E-value=5.7e-13  Score=107.42  Aligned_cols=147  Identities=9%  Similarity=0.039  Sum_probs=102.5

Q ss_pred             EEEEc--CCCCE-EEEEeC-CCeEEEEEcC--C-CeeeeEecC-----CCCCeeEEEEccCCcEEEEeeCC---------
Q psy15417         25 SLSLA--PDMRT-FVSGAC-DASAKLWDIR--D-GSCKQTFPG-----HESDINAVTFFPNGWAFATGSDD---------   83 (176)
Q Consensus        25 ~~~~~--~~~~~-l~s~s~-dg~v~~wd~~--~-~~~~~~~~~-----h~~~v~~v~~~~~~~~l~s~s~d---------   83 (176)
                      ...|+  ||++. ++..+. +..|.++++.  . ++ ...+..     |...+.+++|+|+|+.|+.++.+         
T Consensus        81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~  159 (662)
T 3azo_A           81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV  159 (662)
T ss_dssp             CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred             cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence            45555  99988 665543 4556666665  2 33 445555     56778999999999999988877         


Q ss_pred             -CcEEEeeCCC------CCeeeEE-eecceEeceEEEEECCCCcEEEEEcCC--------CeEEEEeCC-Cc---eeeee
Q psy15417         84 -ATCRLFDIRA------DQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDD--------FNCNVWDSM-KT---ERAGI  143 (176)
Q Consensus        84 -~~i~iwd~~~------~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d--------~~i~v~d~~-~~---~~~~~  143 (176)
                       ..|.+||+.+      ++..... ...   ..+..+.|+|||+.++..+.+        ..|++||+. .+   +....
T Consensus       160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l  236 (662)
T 3azo_A          160 RRFLAAVPLDGSAAADRSAVRELSDDAH---RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL  236 (662)
T ss_dssp             EEEEEEEETTSTTTTCGGGSEESSCSCS---SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred             eeEEEEEECCCCccccCCceeEEEecCC---CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence             5799999877      4332222 111   235567899999988776644        379999987 45   44444


Q ss_pred             ecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        144 LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       144 ~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ...|...+..++|+|+|.+++++..++..+||
T Consensus       237 ~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~  268 (662)
T 3azo_A          237 LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLH  268 (662)
T ss_dssp             EEETTBCEEEEEECTTSCEEEEECTTSSCEEE
T ss_pred             CCCCCceEcceEECCCCeEEEEECCCCCeEEE
Confidence            44556788999999999988888888844444

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.46  E-value=6.5e-12  Score=94.73  Aligned_cols=155  Identities=9%  Similarity=-0.012  Sum_probs=107.3

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEE--EccCCcEEEEe---------------
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT--FFPNGWAFATG---------------   80 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~--~~~~~~~l~s~---------------   80 (176)
                      +|...+....|+||++.|+.++.++.+.+||+.+++....+..+...+....  ++|++..++..               
T Consensus        78 ~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~  157 (388)
T 3pe7_A           78 GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK  157 (388)
T ss_dssp             SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred             CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence            4555555678999999999999999999999999987766666665554444  47888887742               


Q ss_pred             -------eCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC-CCcEEEEEcCC------CeEEEEeCCCceeeeeecC
Q psy15417         81 -------SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDD------FNCNVWDSMKTERAGILAG  146 (176)
Q Consensus        81 -------s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d------~~i~v~d~~~~~~~~~~~~  146 (176)
                             ..+..|.+||+.+++.........   .+..+.|+| ++..++....+      ..+.++|...++.. .+..
T Consensus       158 ~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~---~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~  233 (388)
T 3pe7_A          158 FHEFYFTKPCCRLMRVDLKTGESTVILQENQ---WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKT  233 (388)
T ss_dssp             HHHHGGGCCCEEEEEEETTTCCEEEEEEESS---CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCC
T ss_pred             hhhhhccCCcceEEEEECCCCceEEeecCCc---cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-Eeee
Confidence                   244679999998876544433332   356789999 99877665543      36888886554433 3333


Q ss_pred             CC--ccEEEEEEeCCCCEEEEccCC-----CcEEEeC
Q psy15417        147 HD--NRVSCLGVTEDGMAVATGSWD-----SFLRIWN  176 (176)
Q Consensus       147 ~~--~~i~~~~~~~~~~~l~tg~~d-----~~v~vwd  176 (176)
                      +.  ..+...+|+|+|..|+..+.+     ..|++||
T Consensus       234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d  270 (388)
T 3pe7_A          234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD  270 (388)
T ss_dssp             CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred             CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence            33  357788999999977654331     2388886

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.44  E-value=2.2e-12  Score=98.19  Aligned_cols=138  Identities=13%  Similarity=0.071  Sum_probs=102.7

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-----------eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-----------CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-----------~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      +++.+++++...++++|+.++ +.+|+..+.+           ..... .+.. |+.++|  ++..|+.+ .++.|++||
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d  112 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD  112 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence            688999999999999999885 6669865332           11222 2556 999999  88888888 889999999


Q ss_pred             CCCCCeeeEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         91 IRADQELAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        91 ~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      +++....... .+.   .++..+.+.+.  .++++..||.+.+||+..+....    +...|.|++|+|+|  ++.|..|
T Consensus       113 v~sl~~~~~~~~~~---~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d  181 (388)
T 1xip_A          113 LEELSEFRTVTSFE---KPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD  181 (388)
T ss_dssp             SSSTTCEEEEEECS---SCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred             chhhhccCccceee---cceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence            8765543322 222   24556555443  38888999999999988665533    34679999999998  6788899


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      |++++|+
T Consensus       182 g~i~~~~  188 (388)
T 1xip_A          182 RSFQSFA  188 (388)
T ss_dssp             SCEEEEE
T ss_pred             CcEEEEc
Confidence            9999984

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.44  E-value=2.5e-11  Score=87.23  Aligned_cols=154  Identities=9%  Similarity=0.030  Sum_probs=112.6

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      ..+..+++++++.++++...++.|.+|+..+.............+.++++.|+++.+++...++.|.+||........ .
T Consensus       108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-~  186 (270)
T 1rwi_B          108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-L  186 (270)
T ss_dssp             SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-C
T ss_pred             CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-e
Confidence            568899999999988887778899999876554332222233467889999999877777778899999986554322 1


Q ss_pred             eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .... ...+..+++++++.++++...++.+.+|+............+...+..+++.++|..+++...+++|++|+
T Consensus       187 ~~~~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~  261 (270)
T 1rwi_B          187 PFTD-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT  261 (270)
T ss_dssp             CCSS-CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred             cccC-CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence            1111 13466899999998888888888999999755433332223335678999999999888988999999885

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.43  E-value=7.4e-12  Score=102.10  Aligned_cols=157  Identities=11%  Similarity=0.005  Sum_probs=106.3

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCc-------
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDA-----SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDAT-------   85 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg-----~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~-------   85 (176)
                      +|...+..++|||||++|+.++.++     +|++||+.+++.......+ ..+.+++|+||++.|+.++.++.       
T Consensus       122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~  200 (710)
T 2xdw_A          122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT  200 (710)
T ss_dssp             TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred             CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence            4555688999999999888766543     8999999999876533222 23678999999999998888766       


Q ss_pred             ---------EEEeeCCCCCee--eEEeecceEeceEEEEECCCCcEEEEEcC-----CCeEEEEeCCC------ce-eee
Q psy15417         86 ---------CRLFDIRADQEL--AMYSHDNIICGITSVAFSRSGRLLLAGYD-----DFNCNVWDSMK------TE-RAG  142 (176)
Q Consensus        86 ---------i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~-----d~~i~v~d~~~------~~-~~~  142 (176)
                               |.+|++.+++..  ..+...........+.|+||+++++....     +..+++||+..      +. ...
T Consensus       201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~  280 (710)
T 2xdw_A          201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV  280 (710)
T ss_dssp             CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred             ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence                     999999776532  22222211122457899999998877653     56899999765      32 344


Q ss_pred             eecCCCccEEEEEEeCCCCEEEEccCC----CcEEEeC
Q psy15417        143 ILAGHDNRVSCLGVTEDGMAVATGSWD----SFLRIWN  176 (176)
Q Consensus       143 ~~~~~~~~i~~~~~~~~~~~l~tg~~d----~~v~vwd  176 (176)
                      .+..+...+.. .|+++|..|+..+.+    ..|.+||
T Consensus       281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d  317 (710)
T 2xdw_A          281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID  317 (710)
T ss_dssp             EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred             EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence            45555554443 477888776654442    2466653

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.40  E-value=6.8e-12  Score=102.15  Aligned_cols=155  Identities=9%  Similarity=-0.031  Sum_probs=102.0

Q ss_pred             CCccCeEEEEEcCCCCEEE-----EEeCCCeEEEEEcCCCeeeeEecCCCCCe--eEEEEccCCcEEEEeeCCCc-----
Q psy15417         18 GHTGDVMSLSLAPDMRTFV-----SGACDASAKLWDIRDGSCKQTFPGHESDI--NAVTFFPNGWAFATGSDDAT-----   85 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~-----s~s~dg~v~~wd~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~s~d~~-----   85 (176)
                      +|...+..++|||||++|+     .|+.+.+|++||+.+++...  ..+-..+  .+++|+|+++.|+.++.|..     
T Consensus       118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~  195 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV  195 (695)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred             CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence            5666789999999999988     55556789999999987541  1121222  67999999999999988776     


Q ss_pred             --------EEEeeCCCCCe--eeEEeecceEeceEEEEECCCCcEEEEEcCCC----eEEEEeCCCceeeeeecCCCccE
Q psy15417         86 --------CRLFDIRADQE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDDF----NCNVWDSMKTERAGILAGHDNRV  151 (176)
Q Consensus        86 --------i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~----~i~v~d~~~~~~~~~~~~~~~~i  151 (176)
                              |++|++.+++.  ...+........+..+.|+|+|++++....++    .+.+++...++. ..+..+...+
T Consensus       196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~  274 (695)
T 2bkl_A          196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAK  274 (695)
T ss_dssp             GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCC
T ss_pred             ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCce
Confidence                    99999987653  22333222212356789999999887766555    677776544433 3333344444


Q ss_pred             EEEEEeCCCCEEEEccC---CCcEEEeC
Q psy15417        152 SCLGVTEDGMAVATGSW---DSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~~~~l~tg~~---d~~v~vwd  176 (176)
                      ....+ +++.+++....   ++.|.+||
T Consensus       275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d  301 (695)
T 2bkl_A          275 YEVHA-WKDRFYVLTDEGAPRQRVFEVD  301 (695)
T ss_dssp             EEEEE-ETTEEEEEECTTCTTCEEEEEB
T ss_pred             EEEEe-cCCcEEEEECCCCCCCEEEEEe
Confidence            44445 44544444432   46777764

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.40  E-value=4.3e-11  Score=87.27  Aligned_cols=150  Identities=9%  Similarity=0.071  Sum_probs=115.3

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeC-CCcEEEeeCCCCCeee
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSD-DATCRLFDIRADQELA   98 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~~~~~~~~   98 (176)
                      ..+.++.++|+|++++  +.++.|..||. +++.++.+..+. ..+.++.+.|+|+.+++.+. .+.+..+|. +++.+.
T Consensus        37 ~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~  112 (276)
T 3no2_A           37 WECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLS  112 (276)
T ss_dssp             CCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEE
T ss_pred             CCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEE
Confidence            3577899999999888  34778999999 899999998753 57889999999999999887 667777775 555555


Q ss_pred             EEeecce----EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         99 MYSHDNI----ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        99 ~~~~~~~----~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      .+.....    ......+.+.+++.++++...++.+..||.. ++.+..+.... ....+.+.+++..+++++.+++|..
T Consensus       113 ~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~  190 (276)
T 3no2_A          113 KTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQ  190 (276)
T ss_dssp             EEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEECBTTSEEEE
T ss_pred             EEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC-CccceeEcCCCCEEEEeCCCCeEEE
Confidence            5443211    0122345678899999999999999999976 88888776543 3455678899999999988888887


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       191 ~d  192 (276)
T 3no2_A          191 LN  192 (276)
T ss_dssp             EC
T ss_pred             Ee
Confidence            75

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.38  E-value=3.1e-11  Score=89.75  Aligned_cols=145  Identities=11%  Similarity=0.116  Sum_probs=95.4

Q ss_pred             cCeEEEEEcCCCCEEEEEeCC---Ce--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC------------
Q psy15417         21 GDVMSLSLAPDMRTFVSGACD---AS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD------------   83 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~d---g~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d------------   83 (176)
                      ..+..+.|+|||+.|+..+.+   +.  +.+||+.+++.......+ . +..+.|+|+++.|+.++.+            
T Consensus        59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~  136 (347)
T 2gop_A           59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD  136 (347)
T ss_dssp             ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred             ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence            457789999999988887754   33  778888888765544433 3 9999999999988877632            


Q ss_pred             ---------------CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCC-------eEEEEeCCCceee
Q psy15417         84 ---------------ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDF-------NCNVWDSMKTERA  141 (176)
Q Consensus        84 ---------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~-------~i~v~d~~~~~~~  141 (176)
                                     ..|.+||+.+++.+......    .+..+.|+|++ +++++..+.       ...+|.+..++. 
T Consensus       137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~----~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-  210 (347)
T 2gop_A          137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP----RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-  210 (347)
T ss_dssp             CCCC---------CEEEEEEEETTTTEEEEEEEEE----TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-
T ss_pred             cceeecCcccccCccceEEEEECCCCeEEeeecCC----CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-
Confidence                           46888998876552222221    46678999999 777765432       334443324433 


Q ss_pred             eeecCCCccEEEEEEeCCCCEEEEccCCC--------cEEEeC
Q psy15417        142 GILAGHDNRVSCLGVTEDGMAVATGSWDS--------FLRIWN  176 (176)
Q Consensus       142 ~~~~~~~~~i~~~~~~~~~~~l~tg~~d~--------~v~vwd  176 (176)
                      ..+..+ ..+..  ++|+|..|+.++.+.        .|.+||
T Consensus       211 ~~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d  250 (347)
T 2gop_A          211 EKMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD  250 (347)
T ss_dssp             EEEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred             EEeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC
Confidence            223333 44444  389999887776543        566664

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.36  E-value=1e-10  Score=83.98  Aligned_cols=152  Identities=9%  Similarity=0.039  Sum_probs=109.1

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      ..+.++++++++.++++.. ++.|..||...... ..+.. ....+.++++.|+++.+++...++.|.+|+..+......
T Consensus        67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~  144 (270)
T 1rwi_B           67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL  144 (270)
T ss_dssp             CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred             CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee
Confidence            4577899999998666665 88999999876543 33332 235689999999999888877788999997654332211


Q ss_pred             EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                       .... ...+..+++++++.++++...++.|.+||............+......+++.++|..+++...++.|.+||
T Consensus       145 -~~~~-~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~  219 (270)
T 1rwi_B          145 -PFTG-LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL  219 (270)
T ss_dssp             -CCCS-CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred             -cccc-CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence             1111 12355788999999888887788999999766544333333335678899999998777777788898885

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.35  E-value=1.8e-10  Score=84.14  Aligned_cols=154  Identities=12%  Similarity=0.044  Sum_probs=104.7

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC----CCCeeEEEEccCCcEEEEeeC----------
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH----ESDINAVTFFPNGWAFATGSD----------   82 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~s~----------   82 (176)
                      ..+...+.++.+++++.++++...++.|.+||..+++........    ...++.+++.|+|+.+++.+.          
T Consensus        65 ~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~  144 (296)
T 3e5z_A           65 MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY  144 (296)
T ss_dssp             ESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS
T ss_pred             ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccc
Confidence            345677899999999998888777789999999888754433221    234678999999998887321          


Q ss_pred             -------CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC-Ccee---eeeecCCCccE
Q psy15417         83 -------DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM-KTER---AGILAGHDNRV  151 (176)
Q Consensus        83 -------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~-~~~~---~~~~~~~~~~i  151 (176)
                             .+.|..++.. ++ .....  ......+.++|+|+++.+++...++.|.+|++. .++.   ...+..+....
T Consensus       145 ~~~~~~~~~~l~~~~~~-g~-~~~~~--~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p  220 (296)
T 3e5z_A          145 GGEMELPGRWVFRLAPD-GT-LSAPI--RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT  220 (296)
T ss_dssp             CCCCCSSSCEEEEECTT-SC-EEEEE--CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC
T ss_pred             cccccCCCcEEEEECCC-CC-EEEee--cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC
Confidence                   2344445543 22 22211  111235679999999988888888999999975 3333   22222234455


Q ss_pred             EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        152 SCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ..+++.++|.++++.  ++.|.+||
T Consensus       221 ~~i~~d~~G~l~v~~--~~~v~~~~  243 (296)
T 3e5z_A          221 DGLRVDAGGLIWASA--GDGVHVLT  243 (296)
T ss_dssp             CSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred             CeEEECCCCCEEEEc--CCeEEEEC
Confidence            678999999876665  77888886

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.35  E-value=1.2e-09  Score=79.22  Aligned_cols=157  Identities=8%  Similarity=0.085  Sum_probs=113.8

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ++.+...+.++.+++++.++++...++.|..||.. ++... .+..+...+.++++.+++..+++...++.|..||.. +
T Consensus        10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g   87 (299)
T 2z2n_A           10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G   87 (299)
T ss_dssp             CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence            44566789999999999988877768899999988 55332 223345678999999999988887778889999875 3


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      + ...+........+..+.+++++.++++...++.+..||. .++... ........+..+++.+++..+++...++.|.
T Consensus        88 ~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~  165 (299)
T 2z2n_A           88 I-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG  165 (299)
T ss_dssp             C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred             c-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence            2 222322111134678899999998888878889999997 443332 2233445678899999998887776677887


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      .||
T Consensus       166 ~~~  168 (299)
T 2z2n_A          166 RIT  168 (299)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            775

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.35  E-value=1.1e-09  Score=81.06  Aligned_cols=155  Identities=12%  Similarity=0.065  Sum_probs=106.0

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeC------CCc
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACD----ASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSD------DAT   85 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~d----g~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~------d~~   85 (176)
                      .+...+.++.++++++++++...+    +.|.+||.++++....+.  .+...+++++++|+++.+++...      .+.
T Consensus        84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~  163 (333)
T 2dg1_A           84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG  163 (333)
T ss_dssp             CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred             CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence            355779999999999988887766    689999998876543333  23457899999999988877654      244


Q ss_pred             EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCC-ceeee--------eecCCCccEEEEE
Q psy15417         86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMK-TERAG--------ILAGHDNRVSCLG  155 (176)
Q Consensus        86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~-~~~~~--------~~~~~~~~i~~~~  155 (176)
                      |..+|..+.+.......   ...+..++|+|++..+ ++...++.|.+||... +....        ...++ .....++
T Consensus       164 l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~  239 (333)
T 2dg1_A          164 VYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCC  239 (333)
T ss_dssp             EEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEE
T ss_pred             EEEEeCCCCEEEEeecC---CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceE
Confidence            55556544333222111   1235678999999744 5556678999999753 22211        11222 3567899


Q ss_pred             EeCCCCEEEEccCCCcEEEeC
Q psy15417        156 VTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       156 ~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.++|.++++...++.|.+||
T Consensus       240 ~d~~G~l~v~~~~~~~v~~~d  260 (333)
T 2dg1_A          240 IDSDDNLYVAMYGQGRVLVFN  260 (333)
T ss_dssp             EBTTCCEEEEEETTTEEEEEC
T ss_pred             ECCCCCEEEEEcCCCEEEEEC
Confidence            999998887777778899886

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.33  E-value=1.2e-10  Score=86.58  Aligned_cols=140  Identities=14%  Similarity=0.130  Sum_probs=97.3

Q ss_pred             eEEEEEcCCCCEEEEEeCC---------------------------CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc
Q psy15417         23 VMSLSLAPDMRTFVSGACD---------------------------ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW   75 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~d---------------------------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~   75 (176)
                      +..+.|+||++.|+.++.+                           ..+.+||+.+++....+.. . .+..+.|+|++ 
T Consensus       106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-  182 (347)
T 2gop_A          106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-  182 (347)
T ss_dssp             EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred             ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence            8899999999988887643                           4688999998886455554 4 78899999999 


Q ss_pred             EEEEeeCCC-------cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC--------CeEEEEeCCCcee
Q psy15417         76 AFATGSDDA-------TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD--------FNCNVWDSMKTER  140 (176)
Q Consensus        76 ~l~s~s~d~-------~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d--------~~i~v~d~~~~~~  140 (176)
                      .++++..+.       ...+|.+.+++.......    ..+..+  +|+|+.++.++.+        ..+.+||  .++.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~----~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~  254 (347)
T 2gop_A          183 IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK----VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV  254 (347)
T ss_dssp             EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE----ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE
T ss_pred             EEEEEecccccccccccccEEEeCCCceEEeccC----cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce
Confidence            888876652       445555443332222221    233333  8999877665533        4688888  4554


Q ss_pred             eeeecCCCccEEE-EEEeCCCCEEEEccCCCcEEEe
Q psy15417        141 AGILAGHDNRVSC-LGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       141 ~~~~~~~~~~i~~-~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ......+...+.. +.|+ ++ .+++++.++.++||
T Consensus       255 ~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~  288 (347)
T 2gop_A          255 MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY  288 (347)
T ss_dssp             EESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE
T ss_pred             EeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE
Confidence            4444556667775 8899 88 88899999999987

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.30  E-value=3.5e-09  Score=76.70  Aligned_cols=154  Identities=11%  Similarity=0.041  Sum_probs=111.0

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee-eeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC-KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      +...+..+.+++++.++++...++.|..||.. ++. ...+......+.++++.|++..+++...++.+..||. ++...
T Consensus        55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~  132 (299)
T 2z2n_A           55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR  132 (299)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred             ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence            44678899999999988887778899999986 332 2222334457899999999988888777889999997 44332


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                       .+........+..+.+++++.++++...++.+..||. .++.... .......+..+++.+++..+++...++.|.+||
T Consensus       133 -~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~  210 (299)
T 2z2n_A          133 -EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT  210 (299)
T ss_dssp             -EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred             -EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence             2222211134678899999998888877889999997 5544332 333445678899999988777766677888775

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.29  E-value=1.9e-11  Score=92.14  Aligned_cols=149  Identities=10%  Similarity=-0.062  Sum_probs=98.0

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeE-------------------EEEccCCcEEEEe-----
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINA-------------------VTFFPNGWAFATG-----   80 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~-------------------v~~~~~~~~l~s~-----   80 (176)
                      .+.|+||++.|+..+.++.+.+||+.+++....+..+......                   +.++|+++.++..     
T Consensus        85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~  164 (396)
T 3c5m_A           85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT  164 (396)
T ss_dssp             TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred             cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence            3779999999999999999999999988766655544432222                   2345555544433     


Q ss_pred             eCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECC-CCcEEEEEcCC------CeEEEEeCCCceeeeeecCC-CccEE
Q psy15417         81 SDDATCRLFDIRADQELAMYSHDNIICGITSVAFSR-SGRLLLAGYDD------FNCNVWDSMKTERAGILAGH-DNRVS  152 (176)
Q Consensus        81 s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d------~~i~v~d~~~~~~~~~~~~~-~~~i~  152 (176)
                      ..+..|.+||+.+++........   ..+..+.|+| ++..++....+      ..+.+||...++........ ...+.
T Consensus       165 ~~~~~l~~~d~~~g~~~~~~~~~---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~  241 (396)
T 3c5m_A          165 NPTCRLIKVDIETGELEVIHQDT---AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCT  241 (396)
T ss_dssp             CCCEEEEEEETTTCCEEEEEEES---SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEE
T ss_pred             CCcceEEEEECCCCcEEeeccCC---cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcccc
Confidence            35567899999876654443322   2466789999 77755554433      36888887654433222211 23577


Q ss_pred             EEEEeCCCCEEEEccCC-----CcEEEeC
Q psy15417        153 CLGVTEDGMAVATGSWD-----SFLRIWN  176 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d-----~~v~vwd  176 (176)
                      .++|+|+|..|+.++.+     +.|++||
T Consensus       242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d  270 (396)
T 3c5m_A          242 HEFWIPDGSAMAYVSYFKGQTDRVIYKAN  270 (396)
T ss_dssp             EEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred             ceEECCCCCEEEEEecCCCCccceEEEEE
Confidence            88999999987766543     4488886

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.27  E-value=1.6e-10  Score=87.09  Aligned_cols=151  Identities=15%  Similarity=0.040  Sum_probs=99.4

Q ss_pred             CCccCeEEEEEcC-CCCEEEEEeCC------CeEEEEEcCCCeeeeEecCC--CCCeeEEEEccCCcEEEEeeCC-----
Q psy15417         18 GHTGDVMSLSLAP-DMRTFVSGACD------ASAKLWDIRDGSCKQTFPGH--ESDINAVTFFPNGWAFATGSDD-----   83 (176)
Q Consensus        18 gh~~~V~~~~~~~-~~~~l~s~s~d------g~v~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~s~d-----   83 (176)
                      .+...+..+.|+| ++..++..+.+      ..|.+||+..++.. .+..+  ...+..+.|+|+++.|+.++.+     
T Consensus       185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~  263 (396)
T 3c5m_A          185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTD  263 (396)
T ss_dssp             EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCC
T ss_pred             cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCcc
Confidence            3556788899999 78766665543      35888888766533 33333  2357889999999877666544     


Q ss_pred             CcEEEeeCCCCCeeeEEeecceEeceEEEEECC-CCcEEEEEc----------------CCCeEEEEeCCCceeeeeecC
Q psy15417         84 ATCRLFDIRADQELAMYSHDNIICGITSVAFSR-SGRLLLAGY----------------DDFNCNVWDSMKTERAGILAG  146 (176)
Q Consensus        84 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~g~----------------~d~~i~v~d~~~~~~~~~~~~  146 (176)
                      +.|.+||+.+++.........    .. ..|+| +++.++.+.                .+..+++||+..++.. .+..
T Consensus       264 ~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~  337 (396)
T 3c5m_A          264 RVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCK  337 (396)
T ss_dssp             EEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEE
T ss_pred             ceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccC
Confidence            349999998766543332222    22 78999 999877654                3468999998766542 2333


Q ss_pred             CCc-----------cEEEEEEeCCCCEEEEccC-CCcEEEe
Q psy15417        147 HDN-----------RVSCLGVTEDGMAVATGSW-DSFLRIW  175 (176)
Q Consensus       147 ~~~-----------~i~~~~~~~~~~~l~tg~~-d~~v~vw  175 (176)
                      +..           ....++|+|+|..|+..+. ++...+|
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~  378 (396)
T 3c5m_A          338 HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIY  378 (396)
T ss_dssp             CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred             CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEE
Confidence            333           1455789999988876654 5555555

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.25  E-value=2.3e-10  Score=86.34  Aligned_cols=132  Identities=11%  Similarity=0.003  Sum_probs=90.5

Q ss_pred             CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeCCCCCeeeEEeecce----
Q psy15417         40 CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDIRADQELAMYSHDNI----  105 (176)
Q Consensus        40 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~~~~----  105 (176)
                      .|+.|.+||..+++.+.+++.+..+  .++|+|+++.+++++          .+++|.+||+.+.+.+........    
T Consensus        29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~  106 (361)
T 2oiz_A           29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG  106 (361)
T ss_dssp             GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred             ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence            3789999999999988888877655  899999999988886          367899999987776655443210    


Q ss_pred             EeceEEEEECCCCcEEEEEcC--CCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCC-CEEEEccCCCcEEEe
Q psy15417        106 ICGITSVAFSRSGRLLLAGYD--DFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDG-MAVATGSWDSFLRIW  175 (176)
Q Consensus       106 ~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~tg~~d~~v~vw  175 (176)
                      ......+.++|++++++++..  ++++.+||+.+.+.+.. +... .. ..+.+.|++ ..+++.+.|+.+.+|
T Consensus       107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~~-~~v~~~p~~~~~~~~~~~dg~~~~v  178 (361)
T 2oiz_A          107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-GC-WSVIPQPNRPRSFMTICGDGGLLTI  178 (361)
T ss_dssp             CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-TE-EEEEECTTSSSEEEEEETTSSEEEE
T ss_pred             CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-Cc-ceeEEcCCCCeeEEEECCCCcEEEE
Confidence            012345889999999988763  57899999998887776 4421 11 123344433 334444455554443

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.24  E-value=8.1e-10  Score=82.24  Aligned_cols=150  Identities=7%  Similarity=-0.070  Sum_probs=104.5

Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC----------CcEEEee
Q psy15417         22 DVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD----------ATCRLFD   90 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----------~~i~iwd   90 (176)
                      ....+.+ .+++++++.. .++.|.++|.++++...++... .....+.++|+++.++++..+          +.|.++|
T Consensus       132 ~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id  209 (328)
T 3dsm_A          132 STEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID  209 (328)
T ss_dssp             BCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred             CcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence            3445666 3444444443 4889999999999888877653 345789999999987777655          7899999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeee--ecCCCccEEEEEEeC-CCCEEEEc-
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI--LAGHDNRVSCLGVTE-DGMAVATG-  166 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~l~tg-  166 (176)
                      ..+.+.......... .....++++|++..+++...  .+.+||..+++....  ..........++++| ++..+++. 
T Consensus       210 ~~t~~v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~  286 (328)
T 3dsm_A          210 AETFTVEKQFKFKLG-DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADA  286 (328)
T ss_dssp             TTTTEEEEEEECCTT-CCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEEC
T ss_pred             CCCCeEEEEEecCCC-CCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcc
Confidence            887765544433211 13567999999888877654  899999877664321  121235678899998 56666676 


Q ss_pred             ---cCCCcEEEeC
Q psy15417        167 ---SWDSFLRIWN  176 (176)
Q Consensus       167 ---~~d~~v~vwd  176 (176)
                         ..++.|.+||
T Consensus       287 ~~y~~~~~V~v~d  299 (328)
T 3dsm_A          287 IDYQQQGIVYRYS  299 (328)
T ss_dssp             TTSSSEEEEEEEC
T ss_pred             cccccCCEEEEEC
Confidence               6788999986

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.24  E-value=1.9e-09  Score=80.20  Aligned_cols=150  Identities=6%  Similarity=-0.059  Sum_probs=106.0

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC-----CCeeEEEEccCCcEEEEee-CCCcEEEeeCCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE-----SDINAVTFFPNGWAFATGS-DDATCRLFDIRAD   94 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-----~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~   94 (176)
                      .....++++++++.+++...++.|.+||..+++....+....     .....+++ .+++.+++.. .++.|.++|+.+.
T Consensus        84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~  162 (328)
T 3dsm_A           84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETD  162 (328)
T ss_dssp             SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTT
T ss_pred             CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCC
Confidence            557789998888555555488999999999998877776433     14566777 4555555543 4889999999887


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCC----------CeEEEEeCCCceeeeeecCC-CccEEEEEEeCCCCEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDD----------FNCNVWDSMKTERAGILAGH-DNRVSCLGVTEDGMAV  163 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d----------~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l  163 (176)
                      +.........   ....+.++|+++++++...+          +.+.++|..+++....+.-. ......++++|++..|
T Consensus       163 ~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~l  239 (328)
T 3dsm_A          163 KVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTL  239 (328)
T ss_dssp             EEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEE
T ss_pred             eEEEEEEcCC---CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEE
Confidence            6655444322   23467889999988877655          78999998877766555422 2356889999988887


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      ..+..  .|.+||
T Consensus       240 yv~~~--~v~~~d  250 (328)
T 3dsm_A          240 YWINN--DIWRMP  250 (328)
T ss_dssp             EEESS--SEEEEE
T ss_pred             EEEcc--EEEEEE
Confidence            66543  677664

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.22  E-value=1.6e-08  Score=73.28  Aligned_cols=157  Identities=9%  Similarity=0.025  Sum_probs=113.2

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      +......+.++.+++++.+.++...++.|..||.. ++... .+......+.++++.+++..+++...++.|..+|.. +
T Consensus        15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g   92 (300)
T 2qc5_A           15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G   92 (300)
T ss_dssp             CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence            34455678899999999988887778999999988 55433 233334678999999999888877777889999976 4


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      +. ..+........+..+++.+++.++++...++.+..+|.. ++... ...........+++.+++...++...++.|.
T Consensus        93 ~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~  170 (300)
T 2qc5_A           93 GF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG  170 (300)
T ss_dssp             CE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred             Ce-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence            33 233222111346788999999988888778899999976 44332 2333345678899999998777766677787


Q ss_pred             EeC
Q psy15417        174 IWN  176 (176)
Q Consensus       174 vwd  176 (176)
                      .||
T Consensus       171 ~~~  173 (300)
T 2qc5_A          171 RIT  173 (300)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            764

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.22  E-value=2.2e-10  Score=93.88  Aligned_cols=156  Identities=12%  Similarity=0.023  Sum_probs=99.2

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCc-------
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACD-----ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDAT-------   85 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~-------   85 (176)
                      +|...+..++|||||++|+.++.+     .+|++||+.+++..... .+...+..++|+|+ +.|+.++.+..       
T Consensus       160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~  237 (741)
T 1yr2_A          160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ  237 (741)
T ss_dssp             ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred             CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence            344467889999999988877654     46999999999865431 12222457899999 88888877654       


Q ss_pred             -------EEEeeCCCCCe--eeEEeecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCc--eeeeeecCCCc
Q psy15417         86 -------CRLFDIRADQE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKT--ERAGILAGHDN  149 (176)
Q Consensus        86 -------i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~--~~~~~~~~~~~  149 (176)
                             |.+|++.+++.  ...+........+..+.|+|||++++....+     ..+++||+..+  +....+..+..
T Consensus       238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~  317 (741)
T 1yr2_A          238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK  317 (741)
T ss_dssp             -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred             cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence                   88899876552  2233322211125678999999987766543     37999998665  31334444444


Q ss_pred             cEEEEEEeCCCCEEEEccCC----CcEEEeC
Q psy15417        150 RVSCLGVTEDGMAVATGSWD----SFLRIWN  176 (176)
Q Consensus       150 ~i~~~~~~~~~~~l~tg~~d----~~v~vwd  176 (176)
                      ..... +.|++..|+..+.+    +.|.+||
T Consensus       318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d  347 (741)
T 1yr2_A          318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVD  347 (741)
T ss_dssp             SCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred             ceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence            43333 34778877766553    3366653

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.22  E-value=2e-09  Score=78.75  Aligned_cols=154  Identities=10%  Similarity=0.084  Sum_probs=104.9

Q ss_pred             cCeEEEEEcCCCCEEEEEeCC---------------CeEEEEEcCCCeeeeEecCCCCCeeEEEEc----cCCcEE-EEe
Q psy15417         21 GDVMSLSLAPDMRTFVSGACD---------------ASAKLWDIRDGSCKQTFPGHESDINAVTFF----PNGWAF-ATG   80 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~d---------------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~----~~~~~l-~s~   80 (176)
                      ..+.++.+++++.++++...+               +.|..||.. ++..... .+....+.++++    |+++.+ ++.
T Consensus       117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~  194 (314)
T 1pjx_A          117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAE  194 (314)
T ss_dssp             BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred             cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEE
Confidence            457899999999888877655               567777765 5433322 233456889999    998655 444


Q ss_pred             eCCCcEEEeeCC-CCCee--eEE-eecceE-eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEE
Q psy15417         81 SDDATCRLFDIR-ADQEL--AMY-SHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLG  155 (176)
Q Consensus        81 s~d~~i~iwd~~-~~~~~--~~~-~~~~~~-~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~  155 (176)
                      ..++.|.+|++. ++...  ..+ ...... ..+..+++++++.++++...++.|.+||..+++....+..+...+.+++
T Consensus       195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~  274 (314)
T 1pjx_A          195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLH  274 (314)
T ss_dssp             TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEE
T ss_pred             CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEE
Confidence            567899999976 33211  111 111110 2356788999999988887888999999775666666666667789999


Q ss_pred             EeCCCCEE-EEccCCCcEEEeC
Q psy15417        156 VTEDGMAV-ATGSWDSFLRIWN  176 (176)
Q Consensus       156 ~~~~~~~l-~tg~~d~~v~vwd  176 (176)
                      |++++..| ++...++.|..|+
T Consensus       275 ~~~dg~~l~v~~~~~~~l~~~~  296 (314)
T 1pjx_A          275 FKPQTKTIFVTEHENNAVWKFE  296 (314)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEE
T ss_pred             ECCCCCEEEEEeCCCCeEEEEe
Confidence            99999844 5555567777663

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.20  E-value=2.7e-08  Score=72.04  Aligned_cols=154  Identities=7%  Similarity=-0.012  Sum_probs=109.8

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      ....+.++.+++++.++++...++.|..+|.. ++... .+......+.++++.++++.+++...++.|..++. +++..
T Consensus       102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~  179 (300)
T 2qc5_A          102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE  179 (300)
T ss_dssp             TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred             CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence            34568899999999988887778899999987 55432 23334467899999999997777766788999987 44332


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                       .+........+..+.+++++.++++....+.+.+++. .++... ....+...+..+++.++|...++...++.|..||
T Consensus       180 -~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~  257 (300)
T 2qc5_A          180 -EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRIT  257 (300)
T ss_dssp             -EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred             -EeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence             2322211134667899999988888777888999997 443322 2333456678899999988777766677887775

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.18  E-value=2.8e-09  Score=86.81  Aligned_cols=147  Identities=9%  Similarity=-0.014  Sum_probs=99.5

Q ss_pred             EEEEEcCCCCEEEEEeCCCe-------------EEEEEcCCCe----eeeEecCCCCCeeEEEEccCCcEEEEeeCCC--
Q psy15417         24 MSLSLAPDMRTFVSGACDAS-------------AKLWDIRDGS----CKQTFPGHESDINAVTFFPNGWAFATGSDDA--   84 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~dg~-------------v~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--   84 (176)
                      ..++|+||++.|+.++.|..             |++|++.++.    ++.....+...+.++.|+|+|++++.++.++  
T Consensus       171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~  250 (695)
T 2bkl_A          171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS  250 (695)
T ss_dssp             CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred             cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence            57899999999999998876             9999998875    3333444556789999999999887777665  


Q ss_pred             --cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEc---CCCeEEEEeCCCcee---eeeecCC-CccEEEEE
Q psy15417         85 --TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDSMKTER---AGILAGH-DNRVSCLG  155 (176)
Q Consensus        85 --~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~~~~---~~~~~~~-~~~i~~~~  155 (176)
                        .+.+|+..+++.........   ......+ +++.+++...   .++.|.+||+..++.   ......+ ...+..++
T Consensus       251 ~~~l~~~~~~~~~~~~l~~~~~---~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~  326 (695)
T 2bkl_A          251 ENDVYWKRPGEKDFRLLVKGVG---AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVS  326 (695)
T ss_dssp             EEEEEEECTTCSSCEEEEECSS---CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEE
T ss_pred             ceEEEEEcCCCCceEEeecCCC---ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEE
Confidence              56666654443333322222   2233445 4566444443   257899999876542   2233333 44577788


Q ss_pred             EeCCCCEEEEccCCCcEEEe
Q psy15417        156 VTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       156 ~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ++ ++..+++...|+..+||
T Consensus       327 ~~-~~~lv~~~~~dg~~~l~  345 (695)
T 2bkl_A          327 IV-GGHLSLEYLKDATSEVR  345 (695)
T ss_dssp             EE-TTEEEEEEEETTEEEEE
T ss_pred             EE-CCEEEEEEEECCEEEEE
Confidence            88 56788888999988887

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.16  E-value=1.4e-08  Score=81.03  Aligned_cols=153  Identities=8%  Similarity=-0.031  Sum_probs=109.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCeeeeEecCCCCCeeEEEEc----cCCcEEEEeeC-CCcEEEeeCCCC
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIR--DGSCKQTFPGHESDINAVTFF----PNGWAFATGSD-DATCRLFDIRAD   94 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~--~~~~~~~~~~h~~~v~~v~~~----~~~~~l~s~s~-d~~i~iwd~~~~   94 (176)
                      .+..+.|+||++++++++.|+.|.+||+.  +++.+.+++... ....++|+    |+|+++++++. ++++.++|..+.
T Consensus       198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~  276 (567)
T 1qks_A          198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL  276 (567)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred             CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence            45689999999999999999999999996  777777777533 46789999    69987776655 589999998887


Q ss_pred             CeeeEEeecc---------eEeceEEEEECCCCcE-EEEEcCCCeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCE
Q psy15417         95 QELAMYSHDN---------IICGITSVAFSRSGRL-LLAGYDDFNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMA  162 (176)
Q Consensus        95 ~~~~~~~~~~---------~~~~v~~~~~~~~~~~-l~~g~~d~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~  162 (176)
                      +.+.......         ....+..+.+++++.. ++.-..++.+.++|....+.  ...+ ........+.|+|++.+
T Consensus       277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~  355 (567)
T 1qks_A          277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRY  355 (567)
T ss_dssp             CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCE
T ss_pred             cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCE
Confidence            7765544221         0124667778887654 45556778999999765432  2222 22344567889999998


Q ss_pred             EEEcc-CCCcEEEeC
Q psy15417        163 VATGS-WDSFLRIWN  176 (176)
Q Consensus       163 l~tg~-~d~~v~vwd  176 (176)
                      ++++. .++.|.++|
T Consensus       356 ~~va~~~sn~V~ViD  370 (567)
T 1qks_A          356 FITAANARNKLVVID  370 (567)
T ss_dssp             EEEEEGGGTEEEEEE
T ss_pred             EEEEeCCCCeEEEEE
Confidence            75544 566788875

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.14  E-value=1e-08  Score=83.70  Aligned_cols=156  Identities=12%  Similarity=0.000  Sum_probs=105.3

Q ss_pred             CccCeEEEEEcCCCCEEEEEeC-----CCeEEEEEcCC------Ce-eeeEecCCCCCeeEEEEccCCcEEEEeeCCC--
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGAC-----DASAKLWDIRD------GS-CKQTFPGHESDINAVTFFPNGWAFATGSDDA--   84 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~-----dg~v~~wd~~~------~~-~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--   84 (176)
                      |...+..+.|+||+++|+..+.     +..+.+||+.+      ++ ....+..+...+.. .|+|++..|+..+..+  
T Consensus       231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~  309 (710)
T 2xdw_A          231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSP  309 (710)
T ss_dssp             CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCT
T ss_pred             CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCC
Confidence            4556788999999998887765     56799999986      43 35566666666655 4888887766555533  


Q ss_pred             --cEEEeeCCCCCe---eeEEeecceEeceEEEEECCCCcEEEEEcCCCe--EEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417         85 --TCRLFDIRADQE---LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN--CNVWDSMKTERAGILAGHDNRVSCLGVT  157 (176)
Q Consensus        85 --~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~  157 (176)
                        .|.+||+.++..   ......... ..+..+.|++++.++++...++.  +.+|++..++....+..+...+..++++
T Consensus       310 ~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s  388 (710)
T 2xdw_A          310 NYRLINIDFTDPEESKWKVLVPEHEK-DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQ  388 (710)
T ss_dssp             TCEEEEEETTSCCGGGCEEEECCCSS-CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECC
T ss_pred             CCEEEEEeCCCCCcccceeccCCCCC-CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecC
Confidence              588899876531   222222211 23567788877888888888885  5566765666666666677778888999


Q ss_pred             CCCCEEEEc----cCCCcEEEeC
Q psy15417        158 EDGMAVATG----SWDSFLRIWN  176 (176)
Q Consensus       158 ~~~~~l~tg----~~d~~v~vwd  176 (176)
                      |++..++..    ...+++.+||
T Consensus       389 ~d~~~l~~~~ss~~~P~~i~~~d  411 (710)
T 2xdw_A          389 KKDTEIFYQFTSFLSPGIIYHCD  411 (710)
T ss_dssp             TTCSEEEEEEECSSCCCEEEEEE
T ss_pred             CCCCEEEEEEeCCCCCCEEEEEE
Confidence            988765522    2345676664

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.12  E-value=1.3e-08  Score=81.22  Aligned_cols=143  Identities=13%  Similarity=0.033  Sum_probs=103.9

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC--CCCeeeEEeecceEe
Q psy15417         30 PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR--ADQELAMYSHDNIIC  107 (176)
Q Consensus        30 ~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~--~~~~~~~~~~~~~~~  107 (176)
                      +.+.++++...+++|.++|..+++.+.++... ..+..+.|+|+++++++++.|+.|.+||+.  +.+.+.......   
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~---  240 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS---  240 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS---
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC---
Confidence            44567788888999999999999988888743 356789999999999999999999999995  555554433322   


Q ss_pred             ceEEEEEC----CCCcEEEEEc-CCCeEEEEeCCCceeeeeecC----------CCc-cEEEEEEeCCCC-EEEEccCCC
Q psy15417        108 GITSVAFS----RSGRLLLAGY-DDFNCNVWDSMKTERAGILAG----------HDN-RVSCLGVTEDGM-AVATGSWDS  170 (176)
Q Consensus       108 ~v~~~~~~----~~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~----------~~~-~i~~~~~~~~~~-~l~tg~~d~  170 (176)
                      ....++|+    |+|++++++. .++++.++|..+.+.+..+.-          |.. .+..+.+++++. +++....++
T Consensus       241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g  320 (567)
T 1qks_A          241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG  320 (567)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence            23468899    6998776654 558999999888877766542          112 566777777644 445555666


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      .|.++|
T Consensus       321 ~v~~vd  326 (567)
T 1qks_A          321 KILLVD  326 (567)
T ss_dssp             EEEEEE
T ss_pred             eEEEEe
Confidence            666543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.11  E-value=1.2e-08  Score=75.01  Aligned_cols=155  Identities=8%  Similarity=0.007  Sum_probs=103.8

Q ss_pred             CCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         17 SGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ...........|+++++ ++++...++.|..|+. +++ ...+..+...++++++.++++++++...++.|..|+.. ++
T Consensus        41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~  117 (305)
T 3dr2_A           41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ  117 (305)
T ss_dssp             ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence            33445667889999988 6777778899999998 454 34555566778999999999977666666789999875 43


Q ss_pred             eeeEEe-ecce-EeceEEEEECCCCcEEEE----EcC-------------CCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417         96 ELAMYS-HDNI-ICGITSVAFSRSGRLLLA----GYD-------------DFNCNVWDSMKTERAGILAGHDNRVSCLGV  156 (176)
Q Consensus        96 ~~~~~~-~~~~-~~~v~~~~~~~~~~~l~~----g~~-------------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~  156 (176)
                      ...... .... ...++.+.++|+|.++++    |..             .+.+..+|..+++.....  .......++|
T Consensus       118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~  195 (305)
T 3dr2_A          118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF  195 (305)
T ss_dssp             EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE
T ss_pred             EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE
Confidence            322211 1111 123567899999998886    432             246777876555433322  3344577899


Q ss_pred             eCCCCEEEEccCC------CcEEEeC
Q psy15417        157 TEDGMAVATGSWD------SFLRIWN  176 (176)
Q Consensus       157 ~~~~~~l~tg~~d------~~v~vwd  176 (176)
                      +|++..|..+...      +.|.+||
T Consensus       196 spdg~~lyv~~~~~~~~~~~~i~~~~  221 (305)
T 3dr2_A          196 SPDEQTLYVSQTPEQGHGSVEITAFA  221 (305)
T ss_dssp             CTTSSEEEEEECCC---CCCEEEEEE
T ss_pred             cCCCCEEEEEecCCcCCCCCEEEEEE
Confidence            9999876655444      5777764

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.11  E-value=1.3e-08  Score=78.14  Aligned_cols=153  Identities=11%  Similarity=-0.000  Sum_probs=104.3

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCeee
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQELA   98 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~   98 (176)
                      .....++|++++.++++...++.|+.||..+++.......... .. ++|+|++..++.+..++  .|..++........
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~  208 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT  208 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence            4677899999999888888889999999998876655554333 34 99999999888888766  68888876544332


Q ss_pred             EEe-ecc-eEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeee----ecCCCccE--EEEEEeCC-CCEEEEccC
Q psy15417         99 MYS-HDN-IICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGI----LAGHDNRV--SCLGVTED-GMAVATGSW  168 (176)
Q Consensus        99 ~~~-~~~-~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~----~~~~~~~i--~~~~~~~~-~~~l~tg~~  168 (176)
                      ... ... ....+..++++| ++.+++ ...++.|+.||...+.....    ..++...-  ..++|+|+ +.++++-..
T Consensus       209 ~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~  287 (409)
T 3hrp_A          209 RIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN  287 (409)
T ss_dssp             EEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred             EeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence            221 101 112356789999 555555 66788999999776543222    22222222  28999994 666677777


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      ++.|+.|+
T Consensus       288 ~~~I~~~~  295 (409)
T 3hrp_A          288 LSSVYKIT  295 (409)
T ss_dssp             TTEEEEEC
T ss_pred             CCEEEEEe
Confidence            88888875

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.11  E-value=4.8e-08  Score=71.36  Aligned_cols=152  Identities=13%  Similarity=0.081  Sum_probs=100.7

Q ss_pred             CccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeE-ecC----CCCCeeEEEEccCCcEEEEeeCC---------
Q psy15417         19 HTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQT-FPG----HESDINAVTFFPNGWAFATGSDD---------   83 (176)
Q Consensus        19 h~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~-~~~----h~~~v~~v~~~~~~~~l~s~s~d---------   83 (176)
                      +...+.++.++++ +.++++.. ...|..||.+ ++.... ...    ....+.++++.++++.+++...+         
T Consensus        69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~  146 (314)
T 1pjx_A           69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR  146 (314)
T ss_dssp             EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred             CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence            5567889999999 66555554 4478899988 664433 221    12358899999999888777654         


Q ss_pred             ------CcEEEeeCCCCCeeeEEeecceEeceEEEEEC----CCCcEE-EEEcCCCeEEEEeCC-Cce-----eeeeecC
Q psy15417         84 ------ATCRLFDIRADQELAMYSHDNIICGITSVAFS----RSGRLL-LAGYDDFNCNVWDSM-KTE-----RAGILAG  146 (176)
Q Consensus        84 ------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l-~~g~~d~~i~v~d~~-~~~-----~~~~~~~  146 (176)
                            +.+..++.. ++........   .....++++    |++..+ ++...++.|.+||.. .++     ....+..
T Consensus       147 ~~~~~~~~l~~~~~~-g~~~~~~~~~---~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~  222 (314)
T 1pjx_A          147 SMQEKFGSIYCFTTD-GQMIQVDTAF---QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG  222 (314)
T ss_dssp             TTSSSCEEEEEECTT-SCEEEEEEEE---SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred             cccCCCCeEEEECCC-CCEEEeccCC---CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence                  456666654 3332222111   234678899    998654 555677899999865 232     2223333


Q ss_pred             CC-ccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        147 HD-NRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       147 ~~-~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +. .....+++.++|.++++...++.|.+||
T Consensus       223 ~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d  253 (314)
T 1pjx_A          223 THEGGADGMDFDEDNNLLVANWGSSHIEVFG  253 (314)
T ss_dssp             CSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             CCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence            43 5577899999998888877788898886

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.09  E-value=1.6e-11  Score=93.11  Aligned_cols=138  Identities=16%  Similarity=0.103  Sum_probs=77.0

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceE
Q psy15417         31 DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGIT  110 (176)
Q Consensus        31 ~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~  110 (176)
                      ++..+++++.|+.|..||..+|+.++.++.  .++.+..+.+++..+++++.|+.+..||.++++.+..+..... ..+.
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~-~~~~   84 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP-ELVQ   84 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-HHHT
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-cccc
Confidence            567899999999999999999999998886  4566666667777888888999999999988776555433210 0000


Q ss_pred             -EEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        111 -SVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       111 -~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                       +..+. .+..+++|+.++.++.||..+++....+..+..    ..++|++..+++++.|+.++.||
T Consensus        85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~~~dg~v~a~d  146 (369)
T 2hz6_A           85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLGRTEYTITMYD  146 (369)
T ss_dssp             TCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCC
T ss_pred             cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEEecCCEEEEEE
Confidence             00111 334567788889999999998888776654431    23556778888999999999886

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.06  E-value=6.3e-08  Score=73.46  Aligned_cols=150  Identities=13%  Similarity=0.005  Sum_probs=103.0

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCeeeeEecCC-------CCCeeEEEEccCCcEEEEeeC--CCc
Q psy15417         25 SLSLAPDMRTFVSGA----------CDASAKLWDIRDGSCKQTFPGH-------ESDINAVTFFPNGWAFATGSD--DAT   85 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s----------~dg~v~~wd~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--d~~   85 (176)
                      .+.|+||++.++.+.          .++.|.+||..+.+.+.++...       ......+.|+|+|++++.+..  ++.
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~  149 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence            789999999998886          3678999999988777666432       123457899999999988874  477


Q ss_pred             EEEeeCCCCCeeeE-Eeecc---------------------------------------------------------e--
Q psy15417         86 CRLFDIRADQELAM-YSHDN---------------------------------------------------------I--  105 (176)
Q Consensus        86 i~iwd~~~~~~~~~-~~~~~---------------------------------------------------------~--  105 (176)
                      |.++| .+.+.+.. .....                                                         .  
T Consensus       150 v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  228 (373)
T 2mad_H          150 VGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV  228 (373)
T ss_pred             EEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEE
Confidence            99999 77654433 21100                                                         0  


Q ss_pred             -------E------------------------------eceEEEEECCCCcEEEEEcC----------CCeEEEEeCCCc
Q psy15417        106 -------I------------------------------CGITSVAFSRSGRLLLAGYD----------DFNCNVWDSMKT  138 (176)
Q Consensus       106 -------~------------------------------~~v~~~~~~~~~~~l~~g~~----------d~~i~v~d~~~~  138 (176)
                             .                              .+...+.++|++..+++...          ++.+.++|..+.
T Consensus       229 ~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~  308 (373)
T 2mad_H          229 WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG  308 (373)
T ss_pred             EEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC
Confidence                   0                              00011456666665555432          347889998888


Q ss_pred             eeeeeecCCCccEEEEEEeCCCC-EEEEcc-CCCcEEEeC
Q psy15417        139 ERAGILAGHDNRVSCLGVTEDGM-AVATGS-WDSFLRIWN  176 (176)
Q Consensus       139 ~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~-~d~~v~vwd  176 (176)
                      +.+..+... .....++|+|+|+ .++++. .++.|.+||
T Consensus       309 ~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD  347 (373)
T 2mad_H          309 QTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYD  347 (373)
T ss_pred             EEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence            887777532 3467899999998 676766 488999886

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.04  E-value=1.3e-07  Score=69.23  Aligned_cols=153  Identities=10%  Similarity=0.079  Sum_probs=98.7

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC----CCCeeEEEEccCCcEEEEeeCC---------CcE
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH----ESDINAVTFFPNGWAFATGSDD---------ATC   86 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~s~d---------~~i   86 (176)
                      ...+.++.+++++.++++ . +..|.+||.++++........    ...++.+++.|+|+.+++....         ..-
T Consensus        53 ~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~  130 (297)
T 3g4e_A           53 DAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG  130 (297)
T ss_dssp             SSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred             CCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence            467889999999995554 4 567999999888754333221    2347889999999877655322         234


Q ss_pred             EEeeCCCCCeeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeC--CCcee-----eeeecCCCccEEEEEEeC
Q psy15417         87 RLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDS--MKTER-----AGILAGHDNRVSCLGVTE  158 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~--~~~~~-----~~~~~~~~~~i~~~~~~~  158 (176)
                      .+|.+..........  ......+.++|+|+++.+ ++.+.++.|.+|+.  ..+..     ...+..+......+++.+
T Consensus       131 ~l~~~d~~g~~~~~~--~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~  208 (297)
T 3g4e_A          131 ALYSLFPDHHVKKYF--DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA  208 (297)
T ss_dssp             EEEEECTTSCEEEEE--EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT
T ss_pred             EEEEEECCCCEEEEe--eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC
Confidence            555543322222111  111234679999999755 56667789999986  33332     222233334567889999


Q ss_pred             CCCEEEEccCCCcEEEeC
Q psy15417        159 DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       159 ~~~~l~tg~~d~~v~vwd  176 (176)
                      +|.+.++...++.|..||
T Consensus       209 ~G~lwva~~~~~~v~~~d  226 (297)
T 3g4e_A          209 EGKLWVACYNGGRVIRLD  226 (297)
T ss_dssp             TSCEEEEEETTTEEEEEC
T ss_pred             CCCEEEEEcCCCEEEEEc
Confidence            998877776777888885

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.03  E-value=8.7e-08  Score=73.51  Aligned_cols=154  Identities=7%  Similarity=0.105  Sum_probs=105.4

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE----ecCCCCC--eeEEEEcc-CCcEEEEeeCCCcEEEeeCC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT----FPGHESD--INAVTFFP-NGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~----~~~h~~~--v~~v~~~~-~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ...+.+++++|+...|+.+..++.|..||..++.....    ..++...  .+.++|+| ++..+++-...+.|+.|+..
T Consensus       218 ~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~  297 (409)
T 3hrp_A          218 SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD  297 (409)
T ss_dssp             CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred             cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence            35567899999555555577788999999987753322    2222222  23999999 47777777778899999875


Q ss_pred             CCCeeeEEeec------------ceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCCceeeeeecCC------------
Q psy15417         93 ADQELAMYSHD------------NIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGH------------  147 (176)
Q Consensus        93 ~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~------------  147 (176)
                      .. ........            ........++++|++.++++-. .+++|+.|+...++. ..+.++            
T Consensus       298 g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~  375 (409)
T 3hrp_A          298 GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPL  375 (409)
T ss_dssp             CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTT
T ss_pred             CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChh
Confidence            43 22221211            0012356799999999888888 899999999766653 333332            


Q ss_pred             ---CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        148 ---DNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       148 ---~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                         ......+++.+++.++++-..+++|+.+
T Consensus       376 ~~~~~~P~giavd~~g~lyVad~~n~~Ir~i  406 (409)
T 3hrp_A          376 EATFNYPYDICYDGEGGYWIAEAWGKAIRKY  406 (409)
T ss_dssp             TCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred             ceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence               2457889999998888888888888765

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.03  E-value=4.7e-08  Score=71.52  Aligned_cols=143  Identities=12%  Similarity=0.072  Sum_probs=95.5

Q ss_pred             cCeEEEEEcCCCCEEEEEeCC---------CeEEEEEcCC-CeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCCcEEEe
Q psy15417         21 GDVMSLSLAPDMRTFVSGACD---------ASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLF   89 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~d---------g~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iw   89 (176)
                      ..++.+.++|+|+++++....         ..-.+|.+.. ++.. .+..+-...+.++|+|+++.+ ++.+.++.|..|
T Consensus        98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~  176 (297)
T 3g4e_A           98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAF  176 (297)
T ss_dssp             EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred             CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEE
Confidence            457889999999977654322         2335555542 3322 222233456899999999765 555667889999


Q ss_pred             eCC--CCCee--eEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe-CCCCEE
Q psy15417         90 DIR--ADQEL--AMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT-EDGMAV  163 (176)
Q Consensus        90 d~~--~~~~~--~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l  163 (176)
                      ++.  ++...  ..+ ...........++++++|.+.++...++.|..||..+++.+..+..+...+.+++|. |++..|
T Consensus       177 ~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L  256 (297)
T 3g4e_A          177 DYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEM  256 (297)
T ss_dssp             EECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEE
T ss_pred             eccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEE
Confidence            873  33321  111 111111234578899999988888888899999987788888877776788999998 776654


Q ss_pred             E
Q psy15417        164 A  164 (176)
Q Consensus       164 ~  164 (176)
                      .
T Consensus       257 ~  257 (297)
T 3g4e_A          257 Y  257 (297)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.99  E-value=2.8e-08  Score=75.53  Aligned_cols=117  Identities=16%  Similarity=-0.004  Sum_probs=89.1

Q ss_pred             EEcCCCCEEEEEeC-----CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeC
Q psy15417         27 SLAPDMRTFVSGAC-----DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDI   91 (176)
Q Consensus        27 ~~~~~~~~l~s~s~-----dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~   91 (176)
                      ...|++..++....     ++.|.++|..+++.+.+++.-..+  .+.++|++++++.++          .++.|.+||.
T Consensus        39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~  116 (386)
T 3sjl_D           39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP  116 (386)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred             ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence            34688888877765     578999999999998888755555  499999999887765          3678999999


Q ss_pred             CCCCeeeEEeecc-e----EeceEEEEECCCCcEEEEEcC--CCeEEEEeCCCceeeeeec
Q psy15417         92 RADQELAMYSHDN-I----ICGITSVAFSRSGRLLLAGYD--DFNCNVWDSMKTERAGILA  145 (176)
Q Consensus        92 ~~~~~~~~~~~~~-~----~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~~~~~~~~~~  145 (176)
                      .+.+.+....... .    ......+.|+|||++++++..  ++.+.++|..+.+...++.
T Consensus       117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~  177 (386)
T 3sjl_D          117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD  177 (386)
T ss_dssp             TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred             CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence            9887766554321 0    001235889999998887764  6889999999998877764

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.98  E-value=1.4e-08  Score=75.85  Aligned_cols=159  Identities=9%  Similarity=0.055  Sum_probs=104.1

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeC-----CCeEEEEEcCCCeeeeEecCC------CCCeeEEEEccC-CcEEEEee---C
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGAC-----DASAKLWDIRDGSCKQTFPGH------ESDINAVTFFPN-GWAFATGS---D   82 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~-----dg~v~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~-~~~l~s~s---~   82 (176)
                      +|...+..++++++++++++-..     ++.|.+||+++++.+..+..+      ...++.+++.|+ +..+++-.   .
T Consensus        64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~  143 (343)
T 2qe8_A           64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD  143 (343)
T ss_dssp             CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred             cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence            46678999999999886665543     578999999999877666432      235689999975 55566655   6


Q ss_pred             CCcEEEeeCCCCCeeeEEee-------------cce--------------EeceEEEEECCCCcEEEEEcCCC-eEEEEe
Q psy15417         83 DATCRLFDIRADQELAMYSH-------------DNI--------------ICGITSVAFSRSGRLLLAGYDDF-NCNVWD  134 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~~~~-------------~~~--------------~~~v~~~~~~~~~~~l~~g~~d~-~i~v~d  134 (176)
                      ++.|.+||+.+++.......             ...              ...++.++++|+++.|+.+...+ .+..++
T Consensus       144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~  223 (343)
T 2qe8_A          144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK  223 (343)
T ss_dssp             GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred             CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence            78999999876554332210             000              02357899999998777765554 454444


Q ss_pred             CC---Cc-----eeee--eecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        135 SM---KT-----ERAG--ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       135 ~~---~~-----~~~~--~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ..   ..     +...  ...++......+++.++|.++++...++.|.+||
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d  275 (343)
T 2qe8_A          224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT  275 (343)
T ss_dssp             HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred             HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence            21   10     0000  1112222344578999999988888888999885

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.97  E-value=7.4e-08  Score=71.97  Aligned_cols=149  Identities=13%  Similarity=0.046  Sum_probs=98.7

Q ss_pred             cCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCeeeeEec-------CCCCCeeEEEEccCCcEEEEeeC-----CCcE
Q psy15417         21 GDVMSLSLAPDMRTFVSGAC--DASAKLWDIRDGSCKQTFP-------GHESDINAVTFFPNGWAFATGSD-----DATC   86 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~s~-----d~~i   86 (176)
                      ..+..++++++++++++...  ++.+.||.+.+++.. .++       ++-..+.++++.++++++++-..     ++.|
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i   95 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL   95 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence            57889999999999988642  343455555456533 332       24467899999999986665433     5789


Q ss_pred             EEeeCCCCCeeeEEeecce----EeceEEEEECCC-CcEEEEEc---CCCeEEEEeCCCceeeeeecCCC----------
Q psy15417         87 RLFDIRADQELAMYSHDNI----ICGITSVAFSRS-GRLLLAGY---DDFNCNVWDSMKTERAGILAGHD----------  148 (176)
Q Consensus        87 ~iwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~-~~~l~~g~---~d~~i~v~d~~~~~~~~~~~~~~----------  148 (176)
                      .+||+.+++.+..+.....    ...++.++++++ +..+++-.   .++.|.+||..+++....+.+|.          
T Consensus        96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~  175 (343)
T 2qe8_A           96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV  175 (343)
T ss_dssp             EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred             EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence            9999988775555443211    123467889875 55556655   67889999987665544443210          


Q ss_pred             -------------------ccEEEEEEeCCCCEEEEccCCC
Q psy15417        149 -------------------NRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus       149 -------------------~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                                         .....++++|++..|..+..++
T Consensus       176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~  216 (343)
T 2qe8_A          176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS  216 (343)
T ss_dssp             ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred             ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence                               1257799999998777665554

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.96  E-value=2e-08  Score=81.86  Aligned_cols=143  Identities=16%  Similarity=0.153  Sum_probs=90.4

Q ss_pred             CCccCeEEEEEcCCCCEEE-----EEeCCCeEEEEEcCCCeeeeE-ecCCCCCeeEEEEccCCcEEEEeeCCC-------
Q psy15417         18 GHTGDVMSLSLAPDMRTFV-----SGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWAFATGSDDA-------   84 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~-----s~s~dg~v~~wd~~~~~~~~~-~~~h~~~v~~v~~~~~~~~l~s~s~d~-------   84 (176)
                      +|...+..++||||+++++     .|+.+.+|++||+.+++.+.. +..  ....+++|+ |++.|+.++.+.       
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~  202 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS  202 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence            4566788899999999887     344346799999999985543 221  113567899 999888888774       


Q ss_pred             ------cEEEeeCCCCCe--eeEEeecc-eEeceEEEEECCCCcEEEEEc----CCCeEEEEeCCCce-eeeeecCCCcc
Q psy15417         85 ------TCRLFDIRADQE--LAMYSHDN-IICGITSVAFSRSGRLLLAGY----DDFNCNVWDSMKTE-RAGILAGHDNR  150 (176)
Q Consensus        85 ------~i~iwd~~~~~~--~~~~~~~~-~~~~v~~~~~~~~~~~l~~g~----~d~~i~v~d~~~~~-~~~~~~~~~~~  150 (176)
                            .|.+|++.+++.  ...+.... .......+.++||+++++...    ....++++|+.... ....+..+...
T Consensus       203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~  282 (693)
T 3iuj_A          203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA  282 (693)
T ss_dssp             --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred             ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence                  389999876543  23333322 112245688999999775432    23589999976652 23344444444


Q ss_pred             EEEEEEeCCCCEEE
Q psy15417        151 VSCLGVTEDGMAVA  164 (176)
Q Consensus       151 i~~~~~~~~~~~l~  164 (176)
                      .... +++++..|+
T Consensus       283 ~~~~-~~~~g~~l~  295 (693)
T 3iuj_A          283 DVSL-VDNKGSTLY  295 (693)
T ss_dssp             CEEE-EEEETTEEE
T ss_pred             eEEE-EeccCCEEE
Confidence            3333 455554443

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.93  E-value=1.1e-06  Score=65.24  Aligned_cols=152  Identities=11%  Similarity=-0.012  Sum_probs=95.6

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC---C-CCCeeEEEEccCCcEEEEeeCC----CcEEEeeC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG---H-ESDINAVTFFPNGWAFATGSDD----ATCRLFDI   91 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~---h-~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~   91 (176)
                      ...+.++.++++++++++. .+ .+.+||.++++.......   . ...+++++++|+|+.+++...+    +...+|.+
T Consensus        89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~  166 (326)
T 2ghs_A           89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV  166 (326)
T ss_dssp             SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred             CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence            3578899999998877764 34 499999988875432221   1 2358899999999877665421    23344443


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCC--Cc-e-----eeeeecCCCccEEEEEEeCCCCE
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSM--KT-E-----RAGILAGHDNRVSCLGVTEDGMA  162 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~--~~-~-----~~~~~~~~~~~i~~~~~~~~~~~  162 (176)
                      .+++ ......  .....+.++|+|+++.+ ++...++.|.+|+..  .+ +     ....+.........+++.++|.+
T Consensus       167 ~~g~-~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l  243 (326)
T 2ghs_A          167 AKGK-VTKLFA--DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI  243 (326)
T ss_dssp             ETTE-EEEEEE--EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE
T ss_pred             eCCc-EEEeeC--CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE
Confidence            3332 222111  11235678999999755 555667899999975  44 2     12222223345677889999887


Q ss_pred             EEEccCCCcEEEeC
Q psy15417        163 VATGSWDSFLRIWN  176 (176)
Q Consensus       163 l~tg~~d~~v~vwd  176 (176)
                      .++...++.|..||
T Consensus       244 wva~~~~~~v~~~d  257 (326)
T 2ghs_A          244 WNARWGEGAVDRYD  257 (326)
T ss_dssp             EEEEETTTEEEEEC
T ss_pred             EEEEeCCCEEEEEC
Confidence            76665567788775

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.90  E-value=1.2e-07  Score=77.71  Aligned_cols=146  Identities=9%  Similarity=0.037  Sum_probs=95.7

Q ss_pred             EEEEEcCCCCEEEEEeCCCe--------------EEEEEcCCCee--eeEec--CCCCCeeEEEEccCCcEEEEeeCCC-
Q psy15417         24 MSLSLAPDMRTFVSGACDAS--------------AKLWDIRDGSC--KQTFP--GHESDINAVTFFPNGWAFATGSDDA-   84 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~dg~--------------v~~wd~~~~~~--~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~-   84 (176)
                      ..++|+|| +.|+.++.++.              |++|++.++..  ...+.  .+...+.++.|+|+|++++..+.++ 
T Consensus       212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~  290 (741)
T 1yr2_A          212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT  290 (741)
T ss_dssp             CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred             ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence            57889999 98888877654              88999977652  22233  3334588999999998877776543 


Q ss_pred             ----cEEEeeCCCC--C-eeeEEeecceEeceEEEEECCCCcEEEEEcC----CCeEEEEeCCCc--eeeeeecCCCccE
Q psy15417         85 ----TCRLFDIRAD--Q-ELAMYSHDNIICGITSVAFSRSGRLLLAGYD----DFNCNVWDSMKT--ERAGILAGHDNRV  151 (176)
Q Consensus        85 ----~i~iwd~~~~--~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~----d~~i~v~d~~~~--~~~~~~~~~~~~i  151 (176)
                          .|.+||+.++  + .........   ..... +.|++..++..+.    ++.+.+||+...  +....+..+...+
T Consensus       291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~---~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l  366 (741)
T 1yr2_A          291 DPVNTVHVARVTNGKIGPVTALIPDLK---AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNL  366 (741)
T ss_dssp             CSCCEEEEEEEETTEECCCEEEECSSS---SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEE
T ss_pred             CCcceEEEEECCCCCCcccEEecCCCC---ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeE
Confidence                7899998765  3 222222221   12222 2377777666554    456999998763  3333444455556


Q ss_pred             EEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        152 SCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       152 ~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ..+++. ++..+++...|+..+||
T Consensus       367 ~~~~~~-~~~lv~~~~~dg~~~l~  389 (741)
T 1yr2_A          367 ESVGIA-GNRLFASYIHDAKSQVL  389 (741)
T ss_dssp             EEEEEE-BTEEEEEEEETTEEEEE
T ss_pred             EEEEEE-CCEEEEEEEECCEEEEE
Confidence            677777 55677888889888877

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.89  E-value=4.6e-07  Score=68.67  Aligned_cols=141  Identities=13%  Similarity=-0.123  Sum_probs=93.9

Q ss_pred             EcCCCCEEEEEeC--CC---eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeCC
Q psy15417         28 LAPDMRTFVSGAC--DA---SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDIR   92 (176)
Q Consensus        28 ~~~~~~~l~s~s~--dg---~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~~   92 (176)
                      ..|+++.++....  ..   +|.++|..+++.+.+++....+  .++++|+++.++.+.          .++.|.++|..
T Consensus        28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~  105 (373)
T 2mad_H           28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV  105 (373)
T ss_pred             CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence            3467777777653  22   8899999999988888754444  999999999888875          36789999998


Q ss_pred             CCCeeeEEeec--ce---EeceEEEEECCCCcEEEEEcC--CCeEEEEeCCCceeeee-ecCCCccEEEEEEeCCC-CEE
Q psy15417         93 ADQELAMYSHD--NI---ICGITSVAFSRSGRLLLAGYD--DFNCNVWDSMKTERAGI-LAGHDNRVSCLGVTEDG-MAV  163 (176)
Q Consensus        93 ~~~~~~~~~~~--~~---~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l  163 (176)
                      +.+.+......  ..   ......+.++|++++++++..  +..+.++| .+++.... +... ..   +.+.|++ ..+
T Consensus       106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~---~~~~~~~~~~~  180 (373)
T 2mad_H          106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TC---YHIHPGAPSTF  180 (373)
T ss_pred             CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ce---EEEEeCCCceE
Confidence            77665544332  00   011236889999999888764  47899999 88887766 5421 11   2233333 233


Q ss_pred             EEccCCCcEEEe
Q psy15417        164 ATGSWDSFLRIW  175 (176)
Q Consensus       164 ~tg~~d~~v~vw  175 (176)
                      ++.+.|+.+.++
T Consensus       181 ~~~~~dg~~~~v  192 (373)
T 2mad_H          181 YLLCAQGGLAKT  192 (373)
T ss_pred             EEEcCCCCEEEE
Confidence            444455555544

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.89  E-value=6.1e-07  Score=66.56  Aligned_cols=141  Identities=11%  Similarity=0.129  Sum_probs=92.9

Q ss_pred             cCeEEEEEcCCCCEEEEEeC------CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCCcEEEeeCC-
Q psy15417         21 GDVMSLSLAPDMRTFVSGAC------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLFDIR-   92 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~-   92 (176)
                      ..++.+.++|+++++++...      .+.|..++  +++... +..+....++++|+|+++.+ ++.+.++.|.+|++. 
T Consensus       134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~  210 (326)
T 2ghs_A          134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA  210 (326)
T ss_dssp             EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred             CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence            46889999999997765542      23455555  555332 32233457899999999765 444557889999975 


Q ss_pred             -CC-Ce--eeEE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe-CCCCEEEE
Q psy15417         93 -AD-QE--LAMY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT-EDGMAVAT  165 (176)
Q Consensus        93 -~~-~~--~~~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~t  165 (176)
                       ++ ..  ...+ ...........+.+.+++.+.++...++.+.+||. .++....+..+...+.+++|. +++..|..
T Consensus       211 ~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~v  288 (326)
T 2ghs_A          211 RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLV  288 (326)
T ss_dssp             TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEE
T ss_pred             ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEE
Confidence             43 21  1112 11111122456889999998888777788999996 566666666666678999998 88766543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.77  E-value=3.6e-07  Score=66.98  Aligned_cols=146  Identities=13%  Similarity=0.065  Sum_probs=95.4

Q ss_pred             CeEEEEEcCCCCEEEE----EeC-------------CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC-
Q psy15417         22 DVMSLSLAPDMRTFVS----GAC-------------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD-   83 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s----~s~-------------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-   83 (176)
                      .++.+.++++|.+.++    |..             .+.|..+|..+++.....  .....+.++|+|+++.++.+... 
T Consensus       132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~  209 (305)
T 3dr2_A          132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPE  209 (305)
T ss_dssp             CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC
T ss_pred             CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCC
Confidence            3567899999998887    432             245777887777644332  33457889999999877776655 


Q ss_pred             -----CcEEEeeCCCCCeeeEEe-e-cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417         84 -----ATCRLFDIRADQELAMYS-H-DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV  156 (176)
Q Consensus        84 -----~~i~iwd~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~  156 (176)
                           +.|..|++..+. +.... + .........+.++++|.+.++. .+ .|.+|+. .++.+..+..+. .+..++|
T Consensus       210 ~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f  284 (305)
T 3dr2_A          210 QGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DGQLLGHIPTPG-TASNCTF  284 (305)
T ss_dssp             ---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-TSCEEEEEECSS-CCCEEEE
T ss_pred             cCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-CCCEEEEEECCC-ceeEEEE
Confidence                 689999986543 21111 1 0000112357788999965554 44 5999996 566666555444 4778899


Q ss_pred             eCCCCEEEEccCCCcEEE
Q psy15417        157 TEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       157 ~~~~~~l~tg~~d~~v~v  174 (176)
                      .++++.|..++.++-.++
T Consensus       285 ~~d~~~L~it~~~~l~~~  302 (305)
T 3dr2_A          285 DQAQQRLFITGGPCLWML  302 (305)
T ss_dssp             CTTSCEEEEEETTEEEEE
T ss_pred             eCCCCEEEEEcCCeEEEE
Confidence            999888877777665554

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.74  E-value=2e-10  Score=87.01  Aligned_cols=144  Identities=13%  Similarity=0.103  Sum_probs=71.9

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCC-CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~  103 (176)
                      +..+..++..+++++.|+.+..||.++++.+..++.+.. .+.+.-....+..+++++.|+.+..||.++++.+..+...
T Consensus        42 s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~  121 (369)
T 2hz6_A           42 QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSA  121 (369)
T ss_dssp             CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC-----------
T ss_pred             ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCC
Confidence            333445677888888999999999999988777654421 1110000113446788888999999999988775444332


Q ss_pred             ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCC---CEEEEccCCCcEEEeC
Q psy15417        104 NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG---MAVATGSWDSFLRIWN  176 (176)
Q Consensus       104 ~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~tg~~d~~v~vwd  176 (176)
                      .      ...++|++..+++++.++.++.||..+++....+..+.  ....++.++.   ..++.++.|+.++.||
T Consensus       122 ~------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d  189 (369)
T 2hz6_A          122 F------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVD  189 (369)
T ss_dssp             -----------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred             C------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEE
Confidence            1      13345677888888899999999988887655543211  1122233321   4556777888888876

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.70  E-value=2.5e-07  Score=70.02  Aligned_cols=151  Identities=12%  Similarity=-0.004  Sum_probs=101.4

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCeeeeEecCC-------CCCeeEEEEccCCcEEEEeeC--CCc
Q psy15417         25 SLSLAPDMRTFVSGA----------CDASAKLWDIRDGSCKQTFPGH-------ESDINAVTFFPNGWAFATGSD--DAT   85 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s----------~dg~v~~wd~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--d~~   85 (176)
                      .+.|+||++.++.+.          .++.|.+||..+++.+.++..+       ......++|+|+|++++.+..  +..
T Consensus        69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~  148 (368)
T 1mda_H           69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence            699999999888886          3678999999999988887643       123567999999998888864  356


Q ss_pred             EEE--eeCCCCCee-------------------------eEEeecc----------------------------------
Q psy15417         86 CRL--FDIRADQEL-------------------------AMYSHDN----------------------------------  104 (176)
Q Consensus        86 i~i--wd~~~~~~~-------------------------~~~~~~~----------------------------------  104 (176)
                      +.+  +|+.+-..+                         .......                                  
T Consensus       149 v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~v  228 (368)
T 1mda_H          149 AGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA  228 (368)
T ss_dssp             EEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC
T ss_pred             EEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEE
Confidence            888  876320000                         0000000                                  


Q ss_pred             ---eE------------------------------eceEEEEECCCCcEEEEEcC---------CCeEEEEeCCCceeee
Q psy15417        105 ---II------------------------------CGITSVAFSRSGRLLLAGYD---------DFNCNVWDSMKTERAG  142 (176)
Q Consensus       105 ---~~------------------------------~~v~~~~~~~~~~~l~~g~~---------d~~i~v~d~~~~~~~~  142 (176)
                         ..                              .+...+.++|++..++.+..         +....++|..+.+.+.
T Consensus       229 s~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~  308 (368)
T 1mda_H          229 VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG  308 (368)
T ss_dssp             BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE
T ss_pred             cCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEE
Confidence               00                              00011568888876665432         2356699999888887


Q ss_pred             eecCCCccEEEEEEeCCCC-EEEEcc-CCCcEEEeC
Q psy15417        143 ILAGHDNRVSCLGVTEDGM-AVATGS-WDSFLRIWN  176 (176)
Q Consensus       143 ~~~~~~~~i~~~~~~~~~~-~l~tg~-~d~~v~vwd  176 (176)
                      .+.... ....++|+|+++ .+++.. .++.|.++|
T Consensus       309 ~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID  343 (368)
T 1mda_H          309 PISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD  343 (368)
T ss_dssp             CCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred             EEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence            775433 467899999987 456666 589999886

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.67  E-value=2.2e-06  Score=66.07  Aligned_cols=140  Identities=16%  Similarity=-0.041  Sum_probs=94.6

Q ss_pred             CCCCEEEEEeCC-----CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeCCCC
Q psy15417         30 PDMRTFVSGACD-----ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDIRAD   94 (176)
Q Consensus        30 ~~~~~l~s~s~d-----g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~~~~   94 (176)
                      +++..++.....     +.|.++|..+++.+.+++.-..+  .+.++|+++.++.+.          .++.|.++|..+.
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~  159 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF  159 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence            455655555442     68999999999999888765555  899999999887775          4678999999988


Q ss_pred             CeeeEEeec--ce---EeceEEEEECCCCcEEEEEcC--CCeEEEEeCCCceeeeeecCCCc-------cEEEEEEeCCC
Q psy15417         95 QELAMYSHD--NI---ICGITSVAFSRSGRLLLAGYD--DFNCNVWDSMKTERAGILAGHDN-------RVSCLGVTEDG  160 (176)
Q Consensus        95 ~~~~~~~~~--~~---~~~v~~~~~~~~~~~l~~g~~--d~~i~v~d~~~~~~~~~~~~~~~-------~i~~~~~~~~~  160 (176)
                      +.+......  ..   ......+.|+||+++++++..  ++.+.+.|..+.+....+.-...       .-.-++++++|
T Consensus       160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG  239 (426)
T 3c75_H          160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG  239 (426)
T ss_dssp             CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred             cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence            776555432  00   011224789999998888764  57899999998887776653111       01124566666


Q ss_pred             CEEEEccCCCc
Q psy15417        161 MAVATGSWDSF  171 (176)
Q Consensus       161 ~~l~tg~~d~~  171 (176)
                      ..++....+++
T Consensus       240 ~~~~V~~~~~~  250 (426)
T 3c75_H          240 SLARVDFADGE  250 (426)
T ss_dssp             SEEEEECCTTC
T ss_pred             CEEEEECCCCc
Confidence            65544334443

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.67  E-value=1.9e-06  Score=70.29  Aligned_cols=151  Identities=13%  Similarity=0.111  Sum_probs=103.9

Q ss_pred             EEEEcCCCCEEEEEeCCCe-------------------EEEEEcCCCeeeeEecC--CC-------CCeeEEEEccCCc-
Q psy15417         25 SLSLAPDMRTFVSGACDAS-------------------AKLWDIRDGSCKQTFPG--HE-------SDINAVTFFPNGW-   75 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~-------------------v~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~~-   75 (176)
                      .+.++|+..+++.++.++.                   |..||.++|+.+..++.  |.       .++.-.....+|+ 
T Consensus       239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~  318 (689)
T 1yiq_A          239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP  318 (689)
T ss_dssp             CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred             ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence            5788898899999988864                   99999999999988865  21       1222223333554 


Q ss_pred             --EEEEeeCCCcEEEeeCCCCCeeeEEeecce--Eec-----------------------------------eEEEEECC
Q psy15417         76 --AFATGSDDATCRLFDIRADQELAMYSHDNI--ICG-----------------------------------ITSVAFSR  116 (176)
Q Consensus        76 --~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~~~-----------------------------------v~~~~~~~  116 (176)
                        .++.++.+|.+.++|.++++.+........  ...                                   -..++++|
T Consensus       319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp  398 (689)
T 1yiq_A          319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP  398 (689)
T ss_dssp             EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred             EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence              788999999999999998887643322110  000                                   01257788


Q ss_pred             CCcEEEEEcC---------------------------------------------CCeEEEEeCCCceeeeeecCCCccE
Q psy15417        117 SGRLLLAGYD---------------------------------------------DFNCNVWDSMKTERAGILAGHDNRV  151 (176)
Q Consensus       117 ~~~~l~~g~~---------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~i  151 (176)
                      +..++++...                                             ++.++.||+.+++.......+... 
T Consensus       399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~-  477 (689)
T 1yiq_A          399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIF-  477 (689)
T ss_dssp             TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSC-
T ss_pred             CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCc-
Confidence            7766665421                                             377999999999888777654322 


Q ss_pred             EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        152 SCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ....+...+..++.|+.|+.++.||
T Consensus       478 ~~g~~~tagglvf~gt~dg~l~a~D  502 (689)
T 1yiq_A          478 NGGTLSTAGNLVFEGSADGRVIAYA  502 (689)
T ss_dssp             CCCEEEETTTEEEEECTTSEEEEEE
T ss_pred             cCccceECCCEEEEECCCCcEEEEE
Confidence            2234555677888999999999986

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.65  E-value=9.8e-07  Score=67.09  Aligned_cols=146  Identities=8%  Similarity=-0.033  Sum_probs=90.1

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCeeeeEecCCC-------CCeeEEEEccCCcEEEEeeC--CCc
Q psy15417         25 SLSLAPDMRTFVSGA----------CDASAKLWDIRDGSCKQTFPGHE-------SDINAVTFFPNGWAFATGSD--DAT   85 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s----------~dg~v~~wd~~~~~~~~~~~~h~-------~~v~~v~~~~~~~~l~s~s~--d~~   85 (176)
                      .+.++||++.++.++          .++.|.+||..+.+.+.++.-..       .....+.|+|+|++++.+..  ++.
T Consensus        82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~  161 (386)
T 3sjl_D           82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA  161 (386)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred             cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence            389999999887776          35679999999998887775321       24567999999998888764  689


Q ss_pred             EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC-ceeeeeecCC----CccE-EEEEEe-C
Q psy15417         86 CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK-TERAGILAGH----DNRV-SCLGVT-E  158 (176)
Q Consensus        86 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~----~~~i-~~~~~~-~  158 (176)
                      |.++|+.+.+.+........     ...+....+.+++.+.||++.+.++.. ++.......+    ...+ ...+|. +
T Consensus       162 VsVID~~t~~vv~tI~v~g~-----~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~  236 (386)
T 3sjl_D          162 VGVVDLEGKAFKRMLDVPDC-----YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK  236 (386)
T ss_dssp             EEEEETTTTEEEEEEECCSE-----EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred             EEEEECCCCcEEEEEECCCc-----ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence            99999998877766554331     111211234455556667766666654 3321111111    1111 113454 5


Q ss_pred             CCCEEEEccCCCcEEEeC
Q psy15417        159 DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       159 ~~~~l~tg~~d~~v~vwd  176 (176)
                      +|.++. .+.+++|.+.|
T Consensus       237 dG~~~~-vs~~g~V~v~d  253 (386)
T 3sjl_D          237 AGRLVW-PTYTGKIHQID  253 (386)
T ss_dssp             TTEEEE-EBTTSEEEEEE
T ss_pred             CCcEEE-EeCCCEEEEEE
Confidence            564443 34467777654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.58  E-value=1.8e-05  Score=57.18  Aligned_cols=148  Identities=13%  Similarity=0.050  Sum_probs=95.1

Q ss_pred             CeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCeeeeEecCCCC-CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         22 DVMSLSLAPDMRTFVSGAC--DASAKLWDIRDGSCKQTFPGHES-DINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      ....+.|++++.++++.+.  +..|.++|..+++.+..+.-... -...+++.. +..+++.-.++.+.++|..+.+.+.
T Consensus        22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~  100 (266)
T 2iwa_A           22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIK  100 (266)
T ss_dssp             CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEE
T ss_pred             CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEE
Confidence            3578999998655554443  57899999999998887753221 223455542 3444444557899999998887776


Q ss_pred             EEeec-ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCC-----ccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         99 MYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD-----NRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        99 ~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      .++.. ..  +   ..+.+++..++++..++++.++|..+.+....+.--.     ...+.+.|. ++..++....++.|
T Consensus       101 ~i~~g~~~--g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V  174 (266)
T 2iwa_A          101 NFTHQMKD--G---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI  174 (266)
T ss_dssp             EEECCSSS--C---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred             EEECCCCC--e---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence            66544 21  2   2344577666666678899999988877666554211     135677777 56555555556666


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      .+.|
T Consensus       175 ~vID  178 (266)
T 2iwa_A          175 ARIS  178 (266)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6543

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.58  E-value=1.2e-05  Score=58.16  Aligned_cols=146  Identities=9%  Similarity=0.012  Sum_probs=98.4

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN  104 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~  104 (176)
                      .+++.. +.+.++.-.++.+.++|.++.+.+.+++....  ....+.+++..++.+..++++.+.|..+.+.........
T Consensus        70 Gi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~  146 (266)
T 2iwa_A           70 GLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKY  146 (266)
T ss_dssp             EEEEET-TEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred             EEEEeC-CEEEEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECC
Confidence            344442 34445555678899999999998888864311  124466677766666678899999998876655443221


Q ss_pred             ---eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-------------CccEEEEEEeCCCC-EEEEcc
Q psy15417        105 ---IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-------------DNRVSCLGVTEDGM-AVATGS  167 (176)
Q Consensus       105 ---~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~-~l~tg~  167 (176)
                         ....++.+.+. ++..++....+..|.+.|..+++.+..+.-.             ....+.++|+|+++ .++++.
T Consensus       147 ~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk  225 (266)
T 2iwa_A          147 NGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK  225 (266)
T ss_dssp             TTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred             CCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence               11235567777 7777777777889999999998877766421             12458899999875 456776


Q ss_pred             CCCcEEE
Q psy15417        168 WDSFLRI  174 (176)
Q Consensus       168 ~d~~v~v  174 (176)
                      ....+.+
T Consensus       226 ~~~~v~~  232 (266)
T 2iwa_A          226 LWPKLFE  232 (266)
T ss_dssp             TCSEEEE
T ss_pred             CCCeEEE
Confidence            6666654

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.57  E-value=5.5e-06  Score=63.97  Aligned_cols=151  Identities=7%  Similarity=0.056  Sum_probs=96.5

Q ss_pred             EEEEcCCCCEEEEEeCC------CeEEEEEcCCCeeeeEecCCCC---CeeEEEEccCCcEEEEee--------------
Q psy15417         25 SLSLAPDMRTFVSGACD------ASAKLWDIRDGSCKQTFPGHES---DINAVTFFPNGWAFATGS--------------   81 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~d------g~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~s--------------   81 (176)
                      .+...|++ +++++..+      +.+.++|.++.+.+.++.....   --..+-|+|+++.++++.              
T Consensus       142 ~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~  220 (462)
T 2ece_A          142 TVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLE  220 (462)
T ss_dssp             EEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTT
T ss_pred             ceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchh
Confidence            34567888 77777666      7899999999998888863222   123577899999998885              


Q ss_pred             -----CCCcEEEeeCCCCCeeeEEeecceEeceEEEE--ECCCCcEEEEEc------CCCeEEEEeCCCce--eeee--e
Q psy15417         82 -----DDATCRLFDIRADQELAMYSHDNIICGITSVA--FSRSGRLLLAGY------DDFNCNVWDSMKTE--RAGI--L  144 (176)
Q Consensus        82 -----~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~g~------~d~~i~v~d~~~~~--~~~~--~  144 (176)
                           .+.+|.+||+.+.+.+.............-+.  |+|++++++++.      .++++.+|....++  ....  +
T Consensus       221 ~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi  300 (462)
T 2ece_A          221 HLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEI  300 (462)
T ss_dssp             THHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred             hhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeC
Confidence                 36899999998765555544421111222344  499999887766      45577665432221  1111  0


Q ss_pred             cCC----------------CccEEEEEEeCCCCEEEEccC-CCcEEEeC
Q psy15417        145 AGH----------------DNRVSCLGVTEDGMAVATGSW-DSFLRIWN  176 (176)
Q Consensus       145 ~~~----------------~~~i~~~~~~~~~~~l~tg~~-d~~v~vwd  176 (176)
                      ...                ......+.++++|++|..+.+ .+.|.+||
T Consensus       301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Vavfd  349 (462)
T 2ece_A          301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYD  349 (462)
T ss_dssp             CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEE
T ss_pred             CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEE
Confidence            100                133567889999998865544 55788774

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.56  E-value=2.2e-06  Score=69.85  Aligned_cols=151  Identities=14%  Similarity=0.132  Sum_probs=104.5

Q ss_pred             EEEEcCCCCEEEEEeCCC-------------------eEEEEEcCCCeeeeEecC--CC-------CCeeEEEEccCC--
Q psy15417         25 SLSLAPDMRTFVSGACDA-------------------SAKLWDIRDGSCKQTFPG--HE-------SDINAVTFFPNG--   74 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg-------------------~v~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~--   74 (176)
                      .+.+++++.+++.++.++                   .|..+|.++|+.+..++.  |.       ....-+....+|  
T Consensus       247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~  326 (677)
T 1kb0_A          247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP  326 (677)
T ss_dssp             CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred             ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence            577889888888888764                   499999999999888764  21       122223334467  


Q ss_pred             -cEEEEeeCCCcEEEeeCCCCCeeeEEeecce--E------ec-e------------------------EEEEECCCCcE
Q psy15417         75 -WAFATGSDDATCRLFDIRADQELAMYSHDNI--I------CG-I------------------------TSVAFSRSGRL  120 (176)
Q Consensus        75 -~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~------~~-v------------------------~~~~~~~~~~~  120 (176)
                       ..++.++.+|.+.++|.++++.+........  .      +. +                        ..++++|+..+
T Consensus       327 ~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~  406 (677)
T 1kb0_A          327 RKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL  406 (677)
T ss_dssp             EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred             eeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE
Confidence             6799999999999999999887654432210  0      00 0                        14578888777


Q ss_pred             EEEEcC-------------------------------------------CCeEEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417        121 LLAGYD-------------------------------------------DFNCNVWDSMKTERAGILAGHDNRVSCLGVT  157 (176)
Q Consensus       121 l~~g~~-------------------------------------------d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~  157 (176)
                      +++...                                           .+.+..||+.+++........ ..+....+.
T Consensus       407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~  485 (677)
T 1kb0_A          407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLT  485 (677)
T ss_dssp             EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEE
T ss_pred             EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceE
Confidence            766432                                           267999999999887776532 223334455


Q ss_pred             CCCCEEEEccCCCcEEEeC
Q psy15417        158 EDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       158 ~~~~~l~tg~~d~~v~vwd  176 (176)
                      ..+..++.++.|+.+++||
T Consensus       486 ~~g~~v~~g~~dg~l~a~D  504 (677)
T 1kb0_A          486 TAGNVVFQGTADGRLVAYH  504 (677)
T ss_dssp             ETTTEEEEECTTSEEEEEE
T ss_pred             eCCCEEEEECCCCcEEEEE
Confidence            6677888889999999986

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.56  E-value=6.9e-05  Score=53.63  Aligned_cols=154  Identities=8%  Similarity=0.014  Sum_probs=93.5

Q ss_pred             cCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         21 GDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      ..+..++|++++..| ++-..++.|..++.+.......+...-....++++.|+ +..+++-...+.|.++++.......
T Consensus        36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~  115 (267)
T 1npe_A           36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV  115 (267)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence            346789999866544 45555788999999766543333332346789999986 4555666667789999886433222


Q ss_pred             EEeecceEeceEEEEECCC-CcEEEEEcC--CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEE
Q psy15417         99 MYSHDNIICGITSVAFSRS-GRLLLAGYD--DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRI  174 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~-~~~l~~g~~--d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~v  174 (176)
                      .....  ......++++|+ +.++++-..  .+.|..++...................+++++++..| ++-...+.|.+
T Consensus       116 ~~~~~--~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~  193 (267)
T 1npe_A          116 LFDTG--LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC  193 (267)
T ss_dssp             EECSS--CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             EEECC--CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence            22111  123467899996 455555433  4688888754322211111222456788999976544 55556667776


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      +|
T Consensus       194 ~~  195 (267)
T 1npe_A          194 LN  195 (267)
T ss_dssp             EE
T ss_pred             Ee
Confidence            64

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.51  E-value=2.3e-06  Score=65.98  Aligned_cols=78  Identities=9%  Similarity=-0.079  Sum_probs=61.4

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCeeeeEecCC-------CCCeeEEEEccCCcEEEEeeC--CCc
Q psy15417         25 SLSLAPDMRTFVSGA----------CDASAKLWDIRDGSCKQTFPGH-------ESDINAVTFFPNGWAFATGSD--DAT   85 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s----------~dg~v~~wd~~~~~~~~~~~~h-------~~~v~~v~~~~~~~~l~s~s~--d~~   85 (176)
                      .+.++||++.++.+.          .++.|.++|..+++.+.++.-.       ......+.|+|++++++.+..  ++.
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~  201 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA  201 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence            789999999888876          3678999999999888776421       123567899999999988875  578


Q ss_pred             EEEeeCCCCCeeeEEee
Q psy15417         86 CRLFDIRADQELAMYSH  102 (176)
Q Consensus        86 i~iwd~~~~~~~~~~~~  102 (176)
                      |.+.|+.+.+.+.....
T Consensus       202 VsVID~~t~kvv~~I~v  218 (426)
T 3c75_H          202 VGVVDLEGKTFDRMLDV  218 (426)
T ss_dssp             EEEEETTTTEEEEEEEC
T ss_pred             EEEEECCCCeEEEEEEc
Confidence            99999998877665544

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.48  E-value=5.9e-05  Score=54.20  Aligned_cols=146  Identities=10%  Similarity=0.003  Sum_probs=95.6

Q ss_pred             eEEEEEcCCCCEEEEEeCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCCCCCeeeE
Q psy15417         23 VMSLSLAPDMRTFVSGACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS-DDATCRLFDIRADQELAM   99 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~   99 (176)
                      .-.+.|+ ++.++.+.+.+|  .|+.+|+++++.+..+.... ......+.+++..++... .++.+.++|..+.+.+..
T Consensus        45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t  122 (262)
T 3nol_A           45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS  122 (262)
T ss_dssp             EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred             cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence            4678888 666677777666  79999999999888876543 343333333444444444 578899999998888877


Q ss_pred             EeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC--C---ccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417        100 YSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH--D---NRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~--~---~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      ++....-.     .+.+++..|+....+.++.++|..+.+....+.-.  .   ..++.+.+. +|...+..-.+..|.+
T Consensus       123 i~~~~eG~-----glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v  196 (262)
T 3nol_A          123 FNYDGEGW-----GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR  196 (262)
T ss_dssp             EECSSCCC-----CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred             EECCCCce-----EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE
Confidence            76644211     22246676666666788999998887776665431  1   234556676 5655555545666665


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      .|
T Consensus       197 ID  198 (262)
T 3nol_A          197 ID  198 (262)
T ss_dssp             EC
T ss_pred             EE
Confidence            54

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.47  E-value=2.2e-05  Score=56.55  Aligned_cols=144  Identities=8%  Similarity=-0.067  Sum_probs=94.9

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCee--EEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDIN--AVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~--~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      .-.+.|+ ++.++.+.+.+|.|+.+|+++++.+..+ -. ....  ++++.. ++.++..-.++.+.++|..+.+.+..+
T Consensus        57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti  132 (268)
T 3nok_A           57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTT  132 (268)
T ss_dssp             EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred             cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEE
Confidence            4577887 4567778888889999999999887776 22 2333  355543 234444456789999999988888777


Q ss_pred             eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC--CC---ccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG--HD---NRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~--~~---~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      .....-..   +  .+++..|+....+++++++|.++.+....+.-  +.   ..++.+.+. +|...+..-.+..|.+.
T Consensus       133 ~~~~eGwG---L--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI  206 (268)
T 3nok_A          133 RYSGEGWG---L--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI  206 (268)
T ss_dssp             ECSSCCCC---E--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred             eCCCceeE---E--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence            65443222   2  24677777777788999999888777665542  11   134566676 55555555455566654


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       207 D  207 (268)
T 3nok_A          207 D  207 (268)
T ss_dssp             C
T ss_pred             e
Confidence            4

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.46  E-value=1.7e-05  Score=63.17  Aligned_cols=150  Identities=13%  Similarity=0.007  Sum_probs=103.0

Q ss_pred             CeEEEEE-c-CCCCEEEEEe------------------CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee
Q psy15417         22 DVMSLSL-A-PDMRTFVSGA------------------CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS   81 (176)
Q Consensus        22 ~V~~~~~-~-~~~~~l~s~s------------------~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s   81 (176)
                      ....+++ + |++.+++.++                  .++.+-++|.++.+...++.--. ....++++|+|+++++.+
T Consensus       135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~  213 (595)
T 1fwx_A          135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTS  213 (595)
T ss_dssp             SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEE
T ss_pred             CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEe
Confidence            3567887 5 8999888884                  34678899999998888776322 457788999999988887


Q ss_pred             CCC--------------------------------------cEEEeeCCC--CCe-eeEEeecceEeceEEEEECCCCcE
Q psy15417         82 DDA--------------------------------------TCRLFDIRA--DQE-LAMYSHDNIICGITSVAFSRSGRL  120 (176)
Q Consensus        82 ~d~--------------------------------------~i~iwd~~~--~~~-~~~~~~~~~~~~v~~~~~~~~~~~  120 (176)
                      .+.                                      .+.+.|.++  +.. +...+...   ....+.++|||++
T Consensus       214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~sPDGk~  290 (595)
T 1fwx_A          214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKKH  290 (595)
T ss_dssp             SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEES---SCCCEEECTTSSE
T ss_pred             cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCC---CceEEEEcCCCCE
Confidence            553                                      355556554  222 22222211   2346889999986


Q ss_pred             EE-EEcCCCeEEEEeCCCce------------eeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        121 LL-AGYDDFNCNVWDSMKTE------------RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       121 l~-~g~~d~~i~v~d~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ++ ++..+.++.++|..+.+            ...... -...-..++|+++|....+...|++|.+||
T Consensus       291 v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwd  358 (595)
T 1fwx_A          291 LCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWN  358 (595)
T ss_dssp             EEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred             EEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence            64 45577899999987542            222322 223457789999995566788899999996

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.44  E-value=1.1e-05  Score=65.80  Aligned_cols=151  Identities=14%  Similarity=0.064  Sum_probs=88.7

Q ss_pred             CccCeEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCe-eeeEecCCCCCeeEEEEccCCc-EEEEeeCC---CcEEEe
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGAC----DASAKLWDIRDGS-CKQTFPGHESDINAVTFFPNGW-AFATGSDD---ATCRLF   89 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~----dg~v~~wd~~~~~-~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d---~~i~iw   89 (176)
                      |...+..+.|+||+++++....    +..+.++|+.++. ....+..+....... +++++. .++....+   +.|..+
T Consensus       232 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~  310 (693)
T 3iuj_A          232 QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTV  310 (693)
T ss_dssp             GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred             CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence            3445778999999997754332    2478999998763 345566566555555 555554 45555444   468888


Q ss_pred             eCCCCCe--eeE-EeecceEeceEEEEECCCCcEEEEEc-CCC--eEEEEeCCCceeeeeec-CCCccEEEEEEeCCCCE
Q psy15417         90 DIRADQE--LAM-YSHDNIICGITSVAFSRSGRLLLAGY-DDF--NCNVWDSMKTERAGILA-GHDNRVSCLGVTEDGMA  162 (176)
Q Consensus        90 d~~~~~~--~~~-~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~--~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~  162 (176)
                      ++.++..  +.. .....   .+.  .|++++..|+... .++  .+++|++..+.. ..+. .....+..+++++++..
T Consensus       311 d~~~~~~~~~~~l~~~~~---~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~  384 (693)
T 3iuj_A          311 DAANPGPAHWRDLIPERQ---QVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV-REVALPGLGSVSGFNGKHDDPA  384 (693)
T ss_dssp             ETTSCCGGGCEEEECCCS---SCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE-EEECCSSSSEEEECCCCTTCSC
T ss_pred             eCCCCCccccEEEecCCC---CEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee-EEeecCCCceEEeeecCCCCCE
Confidence            8876543  222 22222   222  7778887665544 444  688898764433 3332 23445666677777765


Q ss_pred             EEEccCC----CcEEEeC
Q psy15417        163 VATGSWD----SFLRIWN  176 (176)
Q Consensus       163 l~tg~~d----~~v~vwd  176 (176)
                      ++....+    +++..||
T Consensus       385 l~~~~ss~~tP~~l~~~d  402 (693)
T 3iuj_A          385 LYFGFENYAQPPTLYRFE  402 (693)
T ss_dssp             EEEEEECSSSCCEEEEEC
T ss_pred             EEEEecCCCCCCEEEEEE
Confidence            5443333    4566554

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.43  E-value=4.2e-06  Score=68.16  Aligned_cols=134  Identities=10%  Similarity=0.019  Sum_probs=90.8

Q ss_pred             EEcCCC---CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCC-----------e------------------------eEE
Q psy15417         27 SLAPDM---RTFVSGACDASAKLWDIRDGSCKQTFPGHESD-----------I------------------------NAV   68 (176)
Q Consensus        27 ~~~~~~---~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~-----------v------------------------~~v   68 (176)
                      ....+|   ..++.++.+|.+.++|.++|+.+..++....+           +                        ..+
T Consensus       319 ~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~  398 (677)
T 1kb0_A          319 DIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPM  398 (677)
T ss_dssp             EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCC
T ss_pred             ecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCc
Confidence            333466   68899999999999999999987766532110           1                        146


Q ss_pred             EEccCCcEEEEeeC-------------------------------------------CCcEEEeeCCCCCeeeEEeecce
Q psy15417         69 TFFPNGWAFATGSD-------------------------------------------DATCRLFDIRADQELAMYSHDNI  105 (176)
Q Consensus        69 ~~~~~~~~l~s~s~-------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~  105 (176)
                      +|+|+...++....                                           .+.|..||+.+++.+........
T Consensus       399 a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~  478 (677)
T 1kb0_A          399 SFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP  478 (677)
T ss_dssp             EEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS
T ss_pred             eEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC
Confidence            78888777766543                                           16799999998877655544321


Q ss_pred             EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCC-ccEEEEEEeCCCCEE
Q psy15417        106 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHD-NRVSCLGVTEDGMAV  163 (176)
Q Consensus       106 ~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l  163 (176)
                         .....+.+.+..++.++.++.+++||..+++.+..+.... .....+.|..+|+.+
T Consensus       479 ---~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~  534 (677)
T 1kb0_A          479 ---WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY  534 (677)
T ss_dssp             ---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             ---CcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEE
Confidence               2222344466778888999999999999999888775332 222345566676543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.40  E-value=5e-05  Score=56.38  Aligned_cols=157  Identities=9%  Similarity=0.032  Sum_probs=100.7

Q ss_pred             ccCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCeeee-EecC----C--CCCeeEEEE---ccCCcEEEEeeC------
Q psy15417         20 TGDVMSLSLAPDMRTFVSGA-CDASAKLWDIRDGSCKQ-TFPG----H--ESDINAVTF---FPNGWAFATGSD------   82 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s-~dg~v~~wd~~~~~~~~-~~~~----h--~~~v~~v~~---~~~~~~l~s~s~------   82 (176)
                      ...-.+++|++....|..++ ..++|..||...+.... .+.+    .  ...+.++.+   .|++.++++...      
T Consensus        12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~   91 (334)
T 2p9w_A           12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF   91 (334)
T ss_dssp             TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred             ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence            34445789988666666666 78999999997554322 3332    1  123578999   688877775431      


Q ss_pred             -------CCcEEEeeCC---CCCeeeEEeecc-----------eEeceEEEEECCCCcEEEEEcCC-CeEEEEeCCCcee
Q psy15417         83 -------DATCRLFDIR---ADQELAMYSHDN-----------IICGITSVAFSRSGRLLLAGYDD-FNCNVWDSMKTER  140 (176)
Q Consensus        83 -------d~~i~iwd~~---~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~g~~d-~~i~v~d~~~~~~  140 (176)
                             ++.+..+|+.   +++.+.......           .....+.+++.++|+.+++++.. +.|...+......
T Consensus        92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~  171 (334)
T 2p9w_A           92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV  171 (334)
T ss_dssp             TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred             cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence                   5778889998   666554333211           11247889999999999998888 8887777433222


Q ss_pred             eeeecCC-----CccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        141 AGILAGH-----DNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       141 ~~~~~~~-----~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .......     ....+.+++.|++..|+....++.+.-||
T Consensus       172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD  212 (334)
T 2p9w_A          172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD  212 (334)
T ss_dssp             EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred             eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence            1111111     11256789999998776665588777654

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.38  E-value=6.7e-05  Score=57.86  Aligned_cols=149  Identities=9%  Similarity=0.097  Sum_probs=93.2

Q ss_pred             CeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CC----cEEEeeCCCCC
Q psy15417         22 DVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DA----TCRLFDIRADQ   95 (176)
Q Consensus        22 ~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~----~i~iwd~~~~~   95 (176)
                      ....++++| ++..|+.+...+.|..+|+..++..... ........++|+++++.++.+.. .+    .+...+ +.+.
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~  215 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESG  215 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGT
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCc
Confidence            456789998 4566666665578899999877644333 34456889999999985555544 22    222233 2222


Q ss_pred             ee--eEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeee-cCCCccEEEEEEeCCCC-EEEEccCCC
Q psy15417         96 EL--AMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNRVSCLGVTEDGM-AVATGSWDS  170 (176)
Q Consensus        96 ~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~-~l~tg~~d~  170 (176)
                      ..  ......   .....++++| ++.++++-..++.|..++.......... ......-..++|+|+++ .+++-...+
T Consensus       216 ~~~~~~l~~~---~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~  292 (430)
T 3tc9_A          216 FKVITELTKG---QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH  292 (430)
T ss_dssp             SCSEEEEEEC---SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred             eeeeeeeccC---CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence            21  111111   1234678999 7888888878889999997655432211 11123456899999998 455656677


Q ss_pred             cEEEe
Q psy15417        171 FLRIW  175 (176)
Q Consensus       171 ~v~vw  175 (176)
                      +|..+
T Consensus       293 ~I~~~  297 (430)
T 3tc9_A          293 YILRS  297 (430)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            77765

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.36  E-value=7.6e-05  Score=55.97  Aligned_cols=138  Identities=10%  Similarity=-0.060  Sum_probs=86.5

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCC---------CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEee
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHE---------SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH  102 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~---------~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~  102 (176)
                      +..++.++.++.|..+|.++++.+..+....         ..+.+. ...++..++.++.++.+..+|.++++.+.....
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~  131 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV  131 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence            5677888889999999999999887776432         223222 222355677788899999999988877655443


Q ss_pred             cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccE-----EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        103 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV-----SCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       103 ~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ........  ..  .+..+++++.++.+..+|..+++............     ....+.  +..+..++.++.+..+|
T Consensus       132 ~~~~~~~p--~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d  204 (376)
T 3q7m_A          132 AGEALSRP--VV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVL  204 (376)
T ss_dssp             SSCCCSCC--EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEE
T ss_pred             CCceEcCC--EE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEE
Confidence            32211111  11  13466777889999999988887766654322111     111222  34566777777776653

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.33  E-value=8.3e-05  Score=54.72  Aligned_cols=153  Identities=9%  Similarity=0.031  Sum_probs=92.3

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--------------------CCCCeeEEEEcc-CCcEEEE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--------------------HESDINAVTFFP-NGWAFAT   79 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--------------------h~~~v~~v~~~~-~~~~l~s   79 (176)
                      ....++++++++.++.++..++.|..||..+++.. .+..                    ....+.++++.+ +++.+++
T Consensus        19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~   97 (322)
T 2fp8_A           19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV   97 (322)
T ss_dssp             SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred             CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence            34457888999887888888999999998765432 2211                    013478899997 6655544


Q ss_pred             eeCCCcEEEeeCCCCCeeeEEe-ecc-eEeceEEEEECC-CCcEEEEEcC-----------------CCeEEEEeCCCce
Q psy15417         80 GSDDATCRLFDIRADQELAMYS-HDN-IICGITSVAFSR-SGRLLLAGYD-----------------DFNCNVWDSMKTE  139 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~~~-~~~-~~~~v~~~~~~~-~~~~l~~g~~-----------------d~~i~v~d~~~~~  139 (176)
                       ...+.+..+|..++....... ... .....+.+++.+ ++.++++-..                 ++.+..+|...++
T Consensus        98 -d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~  176 (322)
T 2fp8_A           98 -DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE  176 (322)
T ss_dssp             -ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred             -ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence             444558888865443211111 111 112356789999 9987776432                 3678888865554


Q ss_pred             eeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEEeC
Q psy15417        140 RAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN  176 (176)
Q Consensus       140 ~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vwd  176 (176)
                      ....... ......++++|++..| ++-..++.|.+|+
T Consensus       177 ~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~  213 (322)
T 2fp8_A          177 TTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYW  213 (322)
T ss_dssp             EEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred             EEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEE
Confidence            3222111 1223468899998754 4445556776653

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.31  E-value=9.9e-05  Score=53.05  Aligned_cols=130  Identities=10%  Similarity=0.115  Sum_probs=88.5

Q ss_pred             CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec--c-eEece
Q psy15417         33 RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD--N-IICGI  109 (176)
Q Consensus        33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~--~-~~~~v  109 (176)
                      ++..+...++.+.+||.++.+.+.+++-..   ....+.+++..|+.+..++.|.++|..+.+.+......  . ....+
T Consensus        98 ~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~l  174 (262)
T 3nol_A           98 KIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPEL  174 (262)
T ss_dssp             EEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred             EEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence            334444457889999999999998887532   22334456776766666788999999887766554331  1 11334


Q ss_pred             EEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC------------CccEEEEEEeCCCCEE-EEc
Q psy15417        110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH------------DNRVSCLGVTEDGMAV-ATG  166 (176)
Q Consensus       110 ~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~l-~tg  166 (176)
                      +-+.+. +|.+++....+..|.+.|..+++.+..+.-.            ..-.+.+|++|+++.| +||
T Consensus       175 NELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          175 NELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             EEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             ceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence            556665 7887777777889999999998877665421            1245889999986655 444

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.28  E-value=2.7e-05  Score=63.54  Aligned_cols=128  Identities=13%  Similarity=0.059  Sum_probs=85.5

Q ss_pred             EEEEEeCCCeEEEEEcCCCeeeeEecCCCC---------------------------------------CeeEEEEccCC
Q psy15417         34 TFVSGACDASAKLWDIRDGSCKQTFPGHES---------------------------------------DINAVTFFPNG   74 (176)
Q Consensus        34 ~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~---------------------------------------~v~~v~~~~~~   74 (176)
                      .++.++.+|.+.++|.++|+.+...+....                                       .-..++|+|+.
T Consensus       321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~  400 (689)
T 1yiq_A          321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT  400 (689)
T ss_dssp             EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred             EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence            788999999999999999987743321100                                       01126788887


Q ss_pred             cEEEEeeC---------------------------------------------CCcEEEeeCCCCCeeeEEeecceEece
Q psy15417         75 WAFATGSD---------------------------------------------DATCRLFDIRADQELAMYSHDNIICGI  109 (176)
Q Consensus        75 ~~l~s~s~---------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v  109 (176)
                      ..++....                                             ++.+..||+++++.+........   .
T Consensus       401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~---~  477 (689)
T 1yiq_A          401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI---F  477 (689)
T ss_dssp             TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS---C
T ss_pred             CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC---c
Confidence            67665422                                             36799999998877655443321   1


Q ss_pred             EEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEEEEeCCCC-EEE
Q psy15417        110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGM-AVA  164 (176)
Q Consensus       110 ~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~-~l~  164 (176)
                      ..-.+...+.+++.|+.|+.++.||.++++.+..+..... ....+.|..+|+ |++
T Consensus       478 ~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~  534 (689)
T 1yiq_A          478 NGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT  534 (689)
T ss_dssp             CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             cCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence            1123334667888899999999999999999887764422 223466766765 444

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.26  E-value=2.7e-05  Score=57.01  Aligned_cols=135  Identities=13%  Similarity=0.097  Sum_probs=89.6

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEE
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS  111 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~  111 (176)
                      +..+..++.++.+..+|.+ ++....+..+...+.++...+++. ++.++.++.+..+|.. ++....+....  ..+.+
T Consensus       107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~--~~~~~  181 (330)
T 3hxj_A          107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTND--AITSA  181 (330)
T ss_dssp             TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSS--CCCSC
T ss_pred             CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCC--Cceee
Confidence            4567778888999999998 777777766655667777777776 5556778899999987 55544443322  23445


Q ss_pred             EEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        112 VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       112 ~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +...+++.+++..   +.+..+| .+++...........+.++.+.+++.. ..++.++.+..+|
T Consensus       182 ~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~  241 (330)
T 3hxj_A          182 ASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAIN  241 (330)
T ss_dssp             CEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEEC
T ss_pred             eEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEEC
Confidence            5666677765554   6788999 666666555544455667777777654 4455566665543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.24  E-value=2.7e-05  Score=64.15  Aligned_cols=113  Identities=14%  Similarity=0.097  Sum_probs=70.7

Q ss_pred             CeEEEEEc-CCCCEEEEEeC-C----CeEEEEEcCCC-eeee-EecCCCCCeeEEEEccCCcEEEEeeCC-----CcEEE
Q psy15417         22 DVMSLSLA-PDMRTFVSGAC-D----ASAKLWDIRDG-SCKQ-TFPGHESDINAVTFFPNGWAFATGSDD-----ATCRL   88 (176)
Q Consensus        22 ~V~~~~~~-~~~~~l~s~s~-d----g~v~~wd~~~~-~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~i   88 (176)
                      .+....|| |||++++-... +    .+|+++|+.++ +.+. .+.   ....++.|+|+++.|+-...|     ..|..
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            56789999 99997764332 2    35999999988 6321 111   113468899999877766654     25777


Q ss_pred             eeCCCCCe--eeEEeecceEeceEEEEECCCCcEEEEEc---CCCeEEEEeCCCc
Q psy15417         89 FDIRADQE--LAMYSHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDSMKT  138 (176)
Q Consensus        89 wd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~~  138 (176)
                      +++.+++.  ...+..... .-...+.|+||+++|+...   ....+.++|+..+
T Consensus       252 ~~lgt~~~~~~lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          252 HVMGKLQSEDVCLYEEHNP-LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             EETTSCGGGCEEEEECCCT-TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             EECCCCchhcEEEEecCCC-ceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence            78876542  223322111 1134678999999776544   2345778887654

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.18  E-value=9.8e-05  Score=55.36  Aligned_cols=136  Identities=10%  Similarity=-0.047  Sum_probs=89.3

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEE
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS  111 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~  111 (176)
                      +..++.++.++.+..+|.++++.+.....  .....+..  ++..++.++.++.+..+|..+++.+........ .....
T Consensus       239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~  313 (376)
T 3q7m_A          239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH-RLLTS  313 (376)
T ss_dssp             TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTT-SCCCC
T ss_pred             CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCC-CcccC
Confidence            45677778899999999999988877653  22333333  356777788899999999988876544331110 01111


Q ss_pred             EEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEE-EEEeCCCCEEEEccCCCcEEEeC
Q psy15417        112 VAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC-LGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       112 ~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ...  .+..++.+..++.++.+|..+++...........+.. ....  +..|..++.+|.+..||
T Consensus       314 ~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~--~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          314 PVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAA--DGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             CEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEE--TTEEEEEBTTSCEEEEE
T ss_pred             CEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEE--CCEEEEEeCCCEEEEEe
Confidence            111  2456777888999999999888877766543333222 1222  45677888899998875

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.18  E-value=4e-05  Score=56.07  Aligned_cols=143  Identities=14%  Similarity=0.072  Sum_probs=89.3

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEee
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH  102 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~  102 (176)
                      +.++...+++. +..++.++.+..+|.. ++....+......+.++.+.+++..++..   +.+..+| .+++.......
T Consensus       139 ~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~  212 (330)
T 3hxj_A          139 YATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA  212 (330)
T ss_dssp             CSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC
T ss_pred             eeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc
Confidence            44455565665 5567778999999998 87777776656667778887788765554   7888898 55554433332


Q ss_pred             cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        103 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       103 ~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ..  ..+.++...+++.+.+ ++.++.+..+| ..++...........+..+.+.+++ .|..++.++.+..+|
T Consensus       213 ~~--~~~~~~~~~~~g~l~v-~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d  281 (330)
T 3hxj_A          213 GY--WTVTRPAISEDGTIYV-TSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAIN  281 (330)
T ss_dssp             SS--CCCSCCEECTTSCEEE-EETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEEC
T ss_pred             CC--cceeceEECCCCeEEE-EcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEEC
Confidence            21  2355667777776554 45567787887 4555545444333333334454455 455666776776664

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.17  E-value=9.5e-05  Score=57.18  Aligned_cols=145  Identities=13%  Similarity=0.120  Sum_probs=95.6

Q ss_pred             CCCCEE-EEEeCCCeEEEEEcCCC----eeeeEec------C-CCCCeeEEEEccCCcEEEEeeCC------CcEEEeeC
Q psy15417         30 PDMRTF-VSGACDASAKLWDIRDG----SCKQTFP------G-HESDINAVTFFPNGWAFATGSDD------ATCRLFDI   91 (176)
Q Consensus        30 ~~~~~l-~s~s~dg~v~~wd~~~~----~~~~~~~------~-h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~   91 (176)
                      ++.++| +++-.+..|.++|..+.    +...++.      . -....-.+...|++ .++++..+      +.+.+.|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            667655 55666788999999765    5555552      0 11133457788999 77777665      78999999


Q ss_pred             CCCCeeeEEeecceEece-EEEEECCCCcEEEEEc-------------------CCCeEEEEeCCCceeeeeecCC-C-c
Q psy15417         92 RADQELAMYSHDNIICGI-TSVAFSRSGRLLLAGY-------------------DDFNCNVWDSMKTERAGILAGH-D-N  149 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~g~-------------------~d~~i~v~d~~~~~~~~~~~~~-~-~  149 (176)
                      ++.+.+..++.......+ ..+-|+|+++.+++..                   ...+|.+||+.+++...++.-- . .
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~  251 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR  251 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred             CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence            988877776533111111 1366799999888874                   3679999999887776666532 2 2


Q ss_pred             cEEEEEE--eCCCCEEEEcc------CCCcEEEe
Q psy15417        150 RVSCLGV--TEDGMAVATGS------WDSFLRIW  175 (176)
Q Consensus       150 ~i~~~~~--~~~~~~l~tg~------~d~~v~vw  175 (176)
                      ....+.|  +|++.++..+.      .+++|.+|
T Consensus       252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~  285 (462)
T 2ece_A          252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLW  285 (462)
T ss_dssp             EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEE
T ss_pred             ccceeEeeECCCCCEEEEEEeeeccCCCceEEEE
Confidence            2344555  99998766555      45566554

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.17  E-value=1.8e-05  Score=59.83  Aligned_cols=93  Identities=13%  Similarity=-0.094  Sum_probs=71.0

Q ss_pred             eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------CCCcEEEeeCCCCCeeeEEeecc-e----Ee
Q psy15417         43 SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------DDATCRLFDIRADQELAMYSHDN-I----IC  107 (176)
Q Consensus        43 ~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~~~-~----~~  107 (176)
                      +|.++|..+++.+.+++.-..+  .+.++|+++.++.+.          .++.|.+||+.+.+.+....... .    ..
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~  124 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP  124 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred             eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence            7889999999999988765566  899999998888876          46889999999988876654320 0    00


Q ss_pred             ceEEEEECCCCcEEEEEcC--CCeEEE--EeCCC
Q psy15417        108 GITSVAFSRSGRLLLAGYD--DFNCNV--WDSMK  137 (176)
Q Consensus       108 ~v~~~~~~~~~~~l~~g~~--d~~i~v--~d~~~  137 (176)
                      ....+.++||+++++++..  +..+.+  +|..+
T Consensus       125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence            1235889999998888764  456888  88755

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.16  E-value=9.9e-05  Score=60.04  Aligned_cols=151  Identities=12%  Similarity=0.141  Sum_probs=99.2

Q ss_pred             EEEEcCCCCEEEEEeCCCe-------------------EEEEEcCCCeeeeEecC--CC-------CCeeEEEEccCCc-
Q psy15417         25 SLSLAPDMRTFVSGACDAS-------------------AKLWDIRDGSCKQTFPG--HE-------SDINAVTFFPNGW-   75 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~-------------------v~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~~-   75 (176)
                      .+.++++..+++.++.++.                   |..+|.++|+.+..++.  |.       .+..-..+..+++ 
T Consensus       234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~  313 (668)
T 1kv9_A          234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP  313 (668)
T ss_dssp             CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred             ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence            4678888888888887764                   99999999999988875  22       2333233334664 


Q ss_pred             --EEEEeeCCCcEEEeeCCCCCeeeEEeecce--Ee--------ce------------------------EEEEECCCCc
Q psy15417         76 --AFATGSDDATCRLFDIRADQELAMYSHDNI--IC--------GI------------------------TSVAFSRSGR  119 (176)
Q Consensus        76 --~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~~--------~v------------------------~~~~~~~~~~  119 (176)
                        .++.++.+|.+.++|.++++.+...+....  ..        ++                        ..++++|+..
T Consensus       314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g  393 (668)
T 1kv9_A          314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG  393 (668)
T ss_dssp             EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred             EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence              689999999999999988887643322110  00        00                        1145666655


Q ss_pred             EEEEE------------------------------------cCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE
Q psy15417        120 LLLAG------------------------------------YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus       120 ~l~~g------------------------------------~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  163 (176)
                      +++..                                    ..++.+..||..+++.......+.. .....+...+..+
T Consensus       394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~v  472 (668)
T 1kv9_A          394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH-WNGGTLSTAGNLV  472 (668)
T ss_dssp             EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEE
T ss_pred             EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-CcCceeEeCCCEE
Confidence            44431                                    1347899999999988776653322 2222344456788


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      +.|+.|+.++.||
T Consensus       473 f~g~~dg~l~a~d  485 (668)
T 1kv9_A          473 FQGTAAGQMHAYS  485 (668)
T ss_dssp             EEECTTSEEEEEE
T ss_pred             EEECCcccchhhh
Confidence            8889999999886

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.16  E-value=0.00075  Score=47.99  Aligned_cols=148  Identities=11%  Similarity=-0.001  Sum_probs=92.7

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCCCee
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      .-.-.+.|++ +.++.+.+.+|  .|..+|+++++.+..+.-... .......+.+. .+...-.++.+.++|..+.+.+
T Consensus        21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~   98 (243)
T 3mbr_X           21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR   98 (243)
T ss_dssp             CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred             cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence            3455788986 55556666554  799999999998887764432 33333333344 4444456788999999988888


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC--C---ccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH--D---NRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~--~---~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ..++....  +.   .+.+++..|+....++.+.++|..+.+....+.-.  .   ..++.+.+. +|..++..-.+..|
T Consensus        99 ~ti~~~~~--Gw---glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I  172 (243)
T 3mbr_X           99 ARFRYPGE--GW---ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRI  172 (243)
T ss_dssp             EEEECSSC--CC---EEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEE
T ss_pred             EEEeCCCC--ce---EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeE
Confidence            77766542  22   22246666666667889999998887766655421  1   234555555 45555555445556


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      .+.|
T Consensus       173 ~vID  176 (243)
T 3mbr_X          173 ARID  176 (243)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            5543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.15  E-value=1.4e-05  Score=63.66  Aligned_cols=140  Identities=12%  Similarity=0.064  Sum_probs=91.7

Q ss_pred             EEEEcCCCCEEEEEeCCC--------------------------------------eEEEEEcCC--Cee-eeEecCCCC
Q psy15417         25 SLSLAPDMRTFVSGACDA--------------------------------------SAKLWDIRD--GSC-KQTFPGHES   63 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg--------------------------------------~v~~wd~~~--~~~-~~~~~~h~~   63 (176)
                      .++++|+++++++.+.+.                                      .|.+.|.++  ++. +..++.. .
T Consensus       199 ~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-~  277 (595)
T 1fwx_A          199 NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-N  277 (595)
T ss_dssp             CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-S
T ss_pred             ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC-C
Confidence            467888999888888653                                      477777776  433 4444422 2


Q ss_pred             CeeEEEEccCCcEEEEee-CCCcEEEeeCCCCCe----------eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEE
Q psy15417         64 DINAVTFFPNGWAFATGS-DDATCRLFDIRADQE----------LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV  132 (176)
Q Consensus        64 ~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v  132 (176)
                      ..-++.++|||++++.++ .+.++.++|+.+.+.          ......+ .-.+..-++|+|+|..+++-..++++.+
T Consensus       278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~k  356 (595)
T 1fwx_A          278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVK  356 (595)
T ss_dssp             SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEE
T ss_pred             CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEE
Confidence            456799999998766555 578899999875321          0111111 1123456899999976778889999999


Q ss_pred             EeCCC----------ceeeeeecCCCccE-EE----EEEeCCCCEEEEc
Q psy15417        133 WDSMK----------TERAGILAGHDNRV-SC----LGVTEDGMAVATG  166 (176)
Q Consensus       133 ~d~~~----------~~~~~~~~~~~~~i-~~----~~~~~~~~~l~tg  166 (176)
                      ||+..          .+.+.++.-|..+- .+    ..++|+|++|.+.
T Consensus       357 wdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~  405 (595)
T 1fwx_A          357 WNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL  405 (595)
T ss_dssp             EEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred             EEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence            99766          44566666665531 12    2347899998765

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.15  E-value=0.00055  Score=48.69  Aligned_cols=131  Identities=11%  Similarity=0.070  Sum_probs=88.3

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc---eEec
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN---IICG  108 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~---~~~~  108 (176)
                      +++......++.+.+||.++.+.+.+++....+ .++  .+++..|+.+..++.|.++|..+.+.+.......   ....
T Consensus        75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~  151 (243)
T 3mbr_X           75 DRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN  151 (243)
T ss_dssp             TEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred             CEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence            344455556888999999999999988753322 334  4566666666668899999998877665543211   1123


Q ss_pred             eEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC-------------CCccEEEEEEeCCCCEE-EEc
Q psy15417        109 ITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG-------------HDNRVSCLGVTEDGMAV-ATG  166 (176)
Q Consensus       109 v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l-~tg  166 (176)
                      ++-+.+. ++.+++....+..|.+.|..+++.+..+.-             ...-.+.+|+.|+++.| +||
T Consensus       152 lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          152 LNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             EEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             ceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence            4555554 777777777778999999998887766531             11246889999976554 555

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.13  E-value=0.0003  Score=51.68  Aligned_cols=148  Identities=5%  Similarity=-0.020  Sum_probs=92.0

Q ss_pred             CeEEEEEcC-CCCEEEEEeC-----------------CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeC
Q psy15417         22 DVMSLSLAP-DMRTFVSGAC-----------------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSD   82 (176)
Q Consensus        22 ~V~~~~~~~-~~~~l~s~s~-----------------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~   82 (176)
                      ..+.+++.+ ++.+.++-..                 ++.|..+|..+++....... -...+.++++|+++.++ +-..
T Consensus       127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~  205 (322)
T 2fp8_A          127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFL  205 (322)
T ss_dssp             CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGG
T ss_pred             ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCC
Confidence            467899999 8887766432                 36788888877764332221 13357899999987554 4455


Q ss_pred             CCcEEEeeCCCCC--eeeEEeecceEeceEEEEECCCCcEEEEEcC----------CCeEEEEeCCCceeeeeecCC---
Q psy15417         83 DATCRLFDIRADQ--ELAMYSHDNIICGITSVAFSRSGRLLLAGYD----------DFNCNVWDSMKTERAGILAGH---  147 (176)
Q Consensus        83 d~~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~----------d~~i~v~d~~~~~~~~~~~~~---  147 (176)
                      .+.|..+++....  ....+....  . ...+++.++|.++++...          .+.+..+|. .++.+..+...   
T Consensus       206 ~~~I~~~~~~~~~~~~~~~~~~~~--g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~  281 (322)
T 2fp8_A          206 SHQIVKYWLEGPKKGTAEVLVKIP--N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPF  281 (322)
T ss_dssp             GTEEEEEESSSTTTTCEEEEEECS--S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTT
T ss_pred             CCeEEEEECCCCcCCccceEEeCC--C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCC
Confidence            6889999986432  112222111  1 456889999987777654          456888885 46655555433   


Q ss_pred             -CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        148 -DNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       148 -~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                       ...+..+++. ++..+++...++.|..+
T Consensus       282 ~~~~~~~~~~~-~g~L~v~~~~~~~i~~~  309 (322)
T 2fp8_A          282 AGEHFEQIQEH-DGLLYIGTLFHGSVGIL  309 (322)
T ss_dssp             TTSCCCEEEEE-TTEEEEECSSCSEEEEE
T ss_pred             ccccceEEEEe-CCEEEEeecCCCceEEE
Confidence             2345556663 56666666667777765

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.12  E-value=0.00072  Score=48.66  Aligned_cols=136  Identities=8%  Similarity=-0.002  Sum_probs=92.1

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc-
Q psy15417         26 LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN-  104 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-  104 (176)
                      +++.. +++..+...++.+.+||.++.+.+.+++-... -.+++  +++..|+.+..++.|.++|..+.+.+....... 
T Consensus       101 it~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~  176 (268)
T 3nok_A          101 LASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR  176 (268)
T ss_dssp             EEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred             EEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC
Confidence            55543 34445555688899999999999998875322 23344  567777777678899999998877665543211 


Q ss_pred             --eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-------------CccEEEEEEeCCC-CEEEEc
Q psy15417        105 --IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-------------DNRVSCLGVTEDG-MAVATG  166 (176)
Q Consensus       105 --~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~-~~l~tg  166 (176)
                        ....++-+.|. +|.+++....+..|.+.|..+++.+..+.-.             ..-.+.+|+.|++ .+++||
T Consensus       177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence              11234556665 7787777777889999999888876655311             1246889999875 455666

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.99  E-value=0.0011  Score=51.10  Aligned_cols=151  Identities=11%  Similarity=0.045  Sum_probs=89.8

Q ss_pred             cCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC---Cc-EEEeeCCCC
Q psy15417         21 GDVMSLSLAPD--MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD---AT-CRLFDIRAD   94 (176)
Q Consensus        21 ~~V~~~~~~~~--~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d---~~-i~iwd~~~~   94 (176)
                      .....++|+|+  ...|+.+...+.|+.+|..+++... +........++++.+++..+++-...   .. +...+....
T Consensus       139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~  217 (433)
T 4hw6_A          139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG  217 (433)
T ss_dssp             SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred             CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence            34568999984  4555555554789999998876544 43344568999999999955554321   12 222222111


Q ss_pred             Cee-eEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCCCceeeeeec--CCCccEEEEEEeCCCC-EEEEccCC
Q psy15417         95 QEL-AMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSMKTERAGILA--GHDNRVSCLGVTEDGM-AVATGSWD  169 (176)
Q Consensus        95 ~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~-~l~tg~~d  169 (176)
                      ... ......   .....++++| ++.++++-..++.|+.+|...++....+.  +....-..++|+|++. ++++-...
T Consensus       218 ~~~~~~~~~~---~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~  294 (433)
T 4hw6_A          218 FTERLSLCNA---RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK  294 (433)
T ss_dssp             TCCEEEEEEC---SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred             eecccccccc---CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence            110 111111   1234578899 78887787788899999976554422221  1122234689999998 44555566


Q ss_pred             CcEEEe
Q psy15417        170 SFLRIW  175 (176)
Q Consensus       170 ~~v~vw  175 (176)
                      ++|+.+
T Consensus       295 ~~I~~~  300 (433)
T 4hw6_A          295 HCIYRV  300 (433)
T ss_dssp             TEEEEE
T ss_pred             CEEEEE
Confidence            677764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.98  E-value=0.0025  Score=47.64  Aligned_cols=152  Identities=7%  Similarity=-0.008  Sum_probs=91.1

Q ss_pred             CeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCeeeE
Q psy15417         22 DVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELAM   99 (176)
Q Consensus        22 ~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~   99 (176)
                      .+..++|++....| .+-...+.|..++++.......+...-....++++.+. ++.+++-...+.|.+.++........
T Consensus        74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l  153 (349)
T 3v64_C           74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL  153 (349)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred             ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence            35788998755544 45455678888988765533333322345678999874 56667766778899998865433222


Q ss_pred             EeecceEeceEEEEECCC-CcEEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE-EEEccCCCcEEEe
Q psy15417        100 YSHDNIICGITSVAFSRS-GRLLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRIW  175 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~-~~~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~tg~~d~~v~vw  175 (176)
                      .. .. ......++++|. +.++.+-... +.|...+................-..++++|++.. +++=+..+.|..+
T Consensus       154 ~~-~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~  230 (349)
T 3v64_C          154 LW-QS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA  230 (349)
T ss_dssp             EC-TT-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             Ee-CC-CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence            21 11 123467889985 5555665555 78888886543222222222344678999975544 4454555566554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.96  E-value=0.003  Score=47.91  Aligned_cols=154  Identities=8%  Similarity=0.001  Sum_probs=91.6

Q ss_pred             cCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         21 GDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        21 ~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      .....++|++... ++.+-...+.|..++++.+.....+........++++.+. ++.+++-...+.|.+.++.......
T Consensus       116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~  195 (386)
T 3v65_B          116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV  195 (386)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred             CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence            3466899987555 4455556678889998766543333333345678999874 5666666667788888876443322


Q ss_pred             EEeecceEeceEEEEECCCC-cEEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEccCCCcEEEe
Q psy15417         99 MYSHDNIICGITSVAFSRSG-RLLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGSWDSFLRIW  175 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~~d~~v~vw  175 (176)
                      .... . ......++++|.+ .++++-... +.|...+................-..++++|++. ++++=+..+.|..+
T Consensus       196 l~~~-~-l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~  273 (386)
T 3v65_B          196 LLWQ-S-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA  273 (386)
T ss_dssp             EECS-S-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred             eecC-C-CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence            2221 1 1234678898865 455554444 6788888654333222222334457899986544 44455556667665


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       274 d  274 (386)
T 3v65_B          274 N  274 (386)
T ss_dssp             C
T ss_pred             e
Confidence            4

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.87  E-value=0.003  Score=44.97  Aligned_cols=152  Identities=11%  Similarity=0.060  Sum_probs=87.2

Q ss_pred             cCeEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeC--CCcEEEeeCCCCCe
Q psy15417         21 GDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSD--DATCRLFDIRADQE   96 (176)
Q Consensus        21 ~~V~~~~~~~~~~~-l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~--d~~i~iwd~~~~~~   96 (176)
                      .....+++++++.. +++-...+.|.+++.+.......+.......+.++++|+ +..+++...  .+.|..+++.....
T Consensus        79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~  158 (267)
T 1npe_A           79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (267)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence            45678999987554 445555678999998644322222222245789999996 444444433  36787777754322


Q ss_pred             eeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                       ....... ......++++|++. ++++-...+.|.++|............ ......+++. ++..+++...++.|..+
T Consensus       159 -~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~  234 (267)
T 1npe_A          159 -RILAQDN-LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAM  234 (267)
T ss_dssp             -EEEECTT-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred             -EEEEECC-CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEE
Confidence             2221111 12356789999754 556666778999999764433333322 2223455654 34444455455677665


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       235 d  235 (267)
T 1npe_A          235 D  235 (267)
T ss_dssp             E
T ss_pred             e
Confidence            3

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.83  E-value=0.0053  Score=48.19  Aligned_cols=150  Identities=9%  Similarity=0.033  Sum_probs=91.4

Q ss_pred             CeEEEEEcC-CCCEEEEEeC-CCeEEEEEcCCCeeeeEecCC---CCCeeEEEE-------ccCCcEEEEeeCCC-c---
Q psy15417         22 DVMSLSLAP-DMRTFVSGAC-DASAKLWDIRDGSCKQTFPGH---ESDINAVTF-------FPNGWAFATGSDDA-T---   85 (176)
Q Consensus        22 ~V~~~~~~~-~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~h---~~~v~~v~~-------~~~~~~l~s~s~d~-~---   85 (176)
                      ....|+|+| +...|+.+.. .+.|++.|+.++.....+...   ......++|       ++++..++.+...+ .   
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            456899998 3555555544 466889999887765544432   235789999       99998666665543 2   


Q ss_pred             ---EEEeeCCC-CCee-----eEEeecceEeceEEEEECC-CCcEEEEEcCCCeEEEEeCC-------Ccee--------
Q psy15417         86 ---CRLFDIRA-DQEL-----AMYSHDNIICGITSVAFSR-SGRLLLAGYDDFNCNVWDSM-------KTER--------  140 (176)
Q Consensus        86 ---i~iwd~~~-~~~~-----~~~~~~~~~~~v~~~~~~~-~~~~l~~g~~d~~i~v~d~~-------~~~~--------  140 (176)
                         +.+.+-.. +...     ......   .....++++| ++.++++-..++.+..+|..       .++.        
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~---~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~  296 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIAAY---KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN  296 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEEEE---SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred             CceEEEEecCCCCceeecccceeeccC---CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence               44554222 1111     111111   1234678899 56777788888899999976       3332        


Q ss_pred             ------eeeecCCCccEEEEEEeCCCCE-EEEccCCCcEEEe
Q psy15417        141 ------AGILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRIW  175 (176)
Q Consensus       141 ------~~~~~~~~~~i~~~~~~~~~~~-l~tg~~d~~v~vw  175 (176)
                            +... +....-..++|+|++.. +++=+..++|+.+
T Consensus       297 ~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~ki  337 (496)
T 3kya_A          297 PNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRS  337 (496)
T ss_dssp             TTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             ccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence                  1112 12234478999999984 4555566677764

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.83  E-value=0.0044  Score=45.54  Aligned_cols=153  Identities=6%  Similarity=-0.044  Sum_probs=88.3

Q ss_pred             cCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCC----CeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCC
Q psy15417         21 GDVMSLSLAPDMR-TFVSGACDASAKLWDIRD----GSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        21 ~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~----~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .....++|++.+. ++.+-..++.|..++++.    ......+...-....++++.+ .++.+++-...+.|.+.++...
T Consensus        30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~  109 (316)
T 1ijq_A           30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  109 (316)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence            4467899998655 555555568899999875    222222332224568899986 4556666667788999998654


Q ss_pred             CeeeEEeecceEeceEEEEECCCC-cEEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCc
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSG-RLLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSF  171 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~  171 (176)
                      ..........  .....++++|.+ .++++-... +.|...+.............-..-..+++.+++..| ++-+..+.
T Consensus       110 ~~~~~~~~~~--~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~  187 (316)
T 1ijq_A          110 KRKTLFRENG--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS  187 (316)
T ss_dssp             SEEEEEECTT--CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             ceEEEEECCC--CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence            3322222111  234678899854 455554433 688888854332222222223456788999765444 45455556


Q ss_pred             EEEe
Q psy15417        172 LRIW  175 (176)
Q Consensus       172 v~vw  175 (176)
                      |..+
T Consensus       188 I~~~  191 (316)
T 1ijq_A          188 ISSI  191 (316)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6654

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.81  E-value=0.00086  Score=54.56  Aligned_cols=145  Identities=12%  Similarity=0.056  Sum_probs=91.0

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCeeeeEecCCC----CCeeEEEEccCCcEEEEeeC-----CCcEEEeeCCCCCeeeEEee
Q psy15417         32 MRTFVSGACDASAKLWDIRDGSCKQTFPGHE----SDINAVTFFPNGWAFATGSD-----DATCRLFDIRADQELAMYSH  102 (176)
Q Consensus        32 ~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~----~~v~~v~~~~~~~~l~s~s~-----d~~i~iwd~~~~~~~~~~~~  102 (176)
                      +..++.++.|+.+..+|.++|+.+..+....    ..+.+.-.-.++..++..+.     ++.+..+|.++++.+..+..
T Consensus       117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~  196 (668)
T 1kv9_A          117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT  196 (668)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence            4567888889999999999999888776521    11111101114444433322     58899999999887765542


Q ss_pred             cceE-----------------------------eceEEEEECCCCcEEEEEcCCC-------------------eEEEEe
Q psy15417        103 DNII-----------------------------CGITSVAFSRSGRLLLAGYDDF-------------------NCNVWD  134 (176)
Q Consensus       103 ~~~~-----------------------------~~v~~~~~~~~~~~l~~g~~d~-------------------~i~v~d  134 (176)
                      ....                             ..-...++.|+...++.+..++                   .+..+|
T Consensus       197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD  276 (668)
T 1kv9_A          197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR  276 (668)
T ss_dssp             SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred             cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence            1000                             0012357788777888877665                   388999


Q ss_pred             CCCceeeeeecC--CC-------ccEEEEEEeCCCC---EEEEccCCCcEEEeC
Q psy15417        135 SMKTERAGILAG--HD-------NRVSCLGVTEDGM---AVATGSWDSFLRIWN  176 (176)
Q Consensus       135 ~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~---~l~tg~~d~~v~vwd  176 (176)
                      ..+++....+..  |.       .......+..+|.   .++.++.+|.++++|
T Consensus       277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD  330 (668)
T 1kv9_A          277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLD  330 (668)
T ss_dssp             TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEE
T ss_pred             CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEE
Confidence            999988776653  22       2222223333554   678888999888875

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.80  E-value=0.0012  Score=52.83  Aligned_cols=149  Identities=12%  Similarity=0.085  Sum_probs=91.8

Q ss_pred             EEEcCCCCEEEEEeCC----------------CeEEEEEcCCCeeeeEecCC--C--------CCeeEEEEccCCc---E
Q psy15417         26 LSLAPDMRTFVSGACD----------------ASAKLWDIRDGSCKQTFPGH--E--------SDINAVTFFPNGW---A   76 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~d----------------g~v~~wd~~~~~~~~~~~~h--~--------~~v~~v~~~~~~~---~   76 (176)
                      +++.+....++.++.+                +.|..+|.++++.+..++..  .        .++. +...++|+   .
T Consensus       240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~  318 (571)
T 2ad6_A          240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPL  318 (571)
T ss_dssp             CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEE
T ss_pred             EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEE
Confidence            4566766666666532                35999999999998887642  1        2221 22234674   5


Q ss_pred             EEEeeCCCcEEEeeCCCCCeeeEEeecceE-----------ece--------------------------EEEEECCCCc
Q psy15417         77 FATGSDDATCRLFDIRADQELAMYSHDNII-----------CGI--------------------------TSVAFSRSGR  119 (176)
Q Consensus        77 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~-----------~~v--------------------------~~~~~~~~~~  119 (176)
                      ++.++.+|.+.+.|..+++.+.........           .++                          ..++++|+..
T Consensus       319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g  398 (571)
T 2ad6_A          319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR  398 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred             EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence            778888999999999888776544322100           000                          1346777765


Q ss_pred             EEEEEc-------------------------------------CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE
Q psy15417        120 LLLAGY-------------------------------------DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA  162 (176)
Q Consensus       120 ~l~~g~-------------------------------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~  162 (176)
                      ++++..                                     .++.+..||..+++......... .+....+...+..
T Consensus       399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~  477 (571)
T 2ad6_A          399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGL  477 (571)
T ss_dssp             EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTE
T ss_pred             EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCE
Confidence            555432                                     34789999988888776654221 1222222233456


Q ss_pred             EEEccCCCcEEEeC
Q psy15417        163 VATGSWDSFLRIWN  176 (176)
Q Consensus       163 l~tg~~d~~v~vwd  176 (176)
                      +..++.|+.++.||
T Consensus       478 v~~g~~dg~l~a~D  491 (571)
T 2ad6_A          478 VWYATLDGYLKALD  491 (571)
T ss_dssp             EEEECTTSEEEEEE
T ss_pred             EEEEcCCCeEEEEE
Confidence            66788999998875

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.79  E-value=0.0044  Score=44.40  Aligned_cols=164  Identities=10%  Similarity=0.119  Sum_probs=98.0

Q ss_pred             ccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee---eeEec------CCCCCeeEEEEccCCcEEEE
Q psy15417          9 ALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC---KQTFP------GHESDINAVTFFPNGWAFAT   79 (176)
Q Consensus         9 ~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~---~~~~~------~h~~~v~~v~~~~~~~~l~s   79 (176)
                      .++...++.|. .....+++.+++.++++.-.++.+.++++.....   .....      .......++++.|.+..|+.
T Consensus        59 ~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v  137 (255)
T 3qqz_A           59 DLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF  137 (255)
T ss_dssp             CEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE
T ss_pred             CEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE
Confidence            33344444443 4567788888888777766778888888764331   12221      12355789999999877766


Q ss_pred             eeCCCcEEEeeCC---CCCeeeEEee-----cceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeec---CC
Q psy15417         80 GSDDATCRLFDIR---ADQELAMYSH-----DNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILA---GH  147 (176)
Q Consensus        80 ~s~d~~i~iwd~~---~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~---~~  147 (176)
                      +.......+|.+.   ....+.....     ......++.++++|. +.+++....+..+..+|. .+++...+.   +.
T Consensus       138 a~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~  216 (255)
T 3qqz_A          138 FKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGS  216 (255)
T ss_dssp             EEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTG
T ss_pred             EECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCcc
Confidence            6665555555543   1111221111     011224678999997 456677778888999995 454444332   11


Q ss_pred             ------CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        148 ------DNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       148 ------~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                            -.+-..++|.++|+.+++ +.-..++.|
T Consensus       217 ~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f  249 (255)
T 3qqz_A          217 RGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF  249 (255)
T ss_dssp             GGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred             CCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence                  124578999999986655 454555544

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.77  E-value=0.002  Score=51.61  Aligned_cols=76  Identities=17%  Similarity=0.184  Sum_probs=52.8

Q ss_pred             EEEEcCCCCEEEEEeC--------------------C----CeEEEEEcCCCeeeeEecC--CC--------CCeeEEEE
Q psy15417         25 SLSLAPDMRTFVSGAC--------------------D----ASAKLWDIRDGSCKQTFPG--HE--------SDINAVTF   70 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~--------------------d----g~v~~wd~~~~~~~~~~~~--h~--------~~v~~v~~   70 (176)
                      .++++|...+++.+..                    |    +.|..+|.++|+.+..++.  |.        .++. +..
T Consensus       250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~  328 (582)
T 1flg_A          250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY  328 (582)
T ss_dssp             CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred             CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence            3567777777776653                    2    5799999999999988764  32        1221 122


Q ss_pred             c-cCC---cEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417         71 F-PNG---WAFATGSDDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        71 ~-~~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~  101 (176)
                      . .+|   ..++.++.+|.+.++|.++++.+..+.
T Consensus       329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~  363 (582)
T 1flg_A          329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP  363 (582)
T ss_dssp             ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence            1 356   378889999999999998888765443

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.74  E-value=0.0012  Score=52.77  Aligned_cols=127  Identities=10%  Similarity=0.001  Sum_probs=79.6

Q ss_pred             EEEEEeCCCeEEEEEcCCCeeeeEecCCC-------------CCe--------------------------eEEEEccCC
Q psy15417         34 TFVSGACDASAKLWDIRDGSCKQTFPGHE-------------SDI--------------------------NAVTFFPNG   74 (176)
Q Consensus        34 ~l~s~s~dg~v~~wd~~~~~~~~~~~~h~-------------~~v--------------------------~~v~~~~~~   74 (176)
                      .++.++.+|.+.++|.++++.+..++...             .++                          ..++++|+.
T Consensus       318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~  397 (571)
T 2ad6_A          318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES  397 (571)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred             EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence            56778889999999999999877654321             111                          235677776


Q ss_pred             cEEEEee-------------------------------------CCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCC
Q psy15417         75 WAFATGS-------------------------------------DDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS  117 (176)
Q Consensus        75 ~~l~s~s-------------------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~  117 (176)
                      ..++...                                     .++.+..||+.+++.+..+........   ..+...
T Consensus       398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~---~~~~t~  474 (571)
T 2ad6_A          398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG---GTLYTK  474 (571)
T ss_dssp             TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS---BCEEET
T ss_pred             CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc---eeEEEC
Confidence            6655543                                     346788999988877655543321111   111123


Q ss_pred             CcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEEEEeCCCCEE
Q psy15417        118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGMAV  163 (176)
Q Consensus       118 ~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l  163 (176)
                      +..++.++.++.++.+|..+++.+..+..... .-..+.+..+|..+
T Consensus       475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~y  521 (571)
T 2ad6_A          475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQY  521 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEE
Confidence            45666688999999999999988877653322 11223354566543

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.71  E-value=0.0061  Score=43.64  Aligned_cols=161  Identities=14%  Similarity=0.134  Sum_probs=97.5

Q ss_pred             ccCCCccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCC-CCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGH-ESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      ++.|-.+.+..++|+|++..| ++...++.|...|.. ++..+.++-. .....++++.+++.++++.-.++.+.++++.
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~   99 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT   99 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence            456666789999999976644 557778888899987 7777776422 2567889999988876776566788888875


Q ss_pred             CCCee---eEEeec----ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCC---Cceeeeee-------cCCCccEEEEE
Q psy15417         93 ADQEL---AMYSHD----NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM---KTERAGIL-------AGHDNRVSCLG  155 (176)
Q Consensus        93 ~~~~~---~~~~~~----~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~---~~~~~~~~-------~~~~~~i~~~~  155 (176)
                      ....+   ......    ....+.-.++++|.+..|.++.+.....+|...   ....+...       ..+...+..++
T Consensus       100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~  179 (255)
T 3qqz_A          100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE  179 (255)
T ss_dssp             TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred             CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence            54321   122111    111234578999998666665554444444432   11111111       11233568899


Q ss_pred             EeCCCC-EEEEccCCCcEEEeC
Q psy15417        156 VTEDGM-AVATGSWDSFLRIWN  176 (176)
Q Consensus       156 ~~~~~~-~l~tg~~d~~v~vwd  176 (176)
                      +.|... +++.....+.+.++|
T Consensus       180 ~dp~tg~lliLS~~s~~L~~~d  201 (255)
T 3qqz_A          180 FNQQKNTLLVLSHESRALQEVT  201 (255)
T ss_dssp             EETTTTEEEEEETTTTEEEEEC
T ss_pred             EcCCCCeEEEEECCCCeEEEEc
Confidence            998754 444444455555443

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.69  E-value=0.0079  Score=44.41  Aligned_cols=151  Identities=9%  Similarity=0.029  Sum_probs=84.4

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEc--CCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDI--RDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      +...+..+.+.+++.+++.+...+..+-.|-  .+-+.+.  ......+..+.+.+++..+ .++.+|.+.+.+...++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~t  237 (327)
T 2xbg_A          161 AIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSEN  237 (327)
T ss_dssp             CCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEE
T ss_pred             CCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCe
Confidence            4557888999998888777654443344442  2222221  2345678889998888655 455677777653221222


Q ss_pred             eeEEeec--ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec---CCCccEEEEEEeCCCCEEEEccCCCc
Q psy15417         97 LAMYSHD--NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA---GHDNRVSCLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus        97 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~tg~~d~~  171 (176)
                      .......  .....+..+.+.+++.+++++. ++.+ ++....++.-..+.   .....+..+.|.+++. ++.++.+|.
T Consensus       238 W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~  314 (327)
T 2xbg_A          238 WGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGI  314 (327)
T ss_dssp             ECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTE
T ss_pred             eEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCce
Confidence            2211111  0112467788888877777765 5666 33333333322222   2234567788876554 455667887


Q ss_pred             EEEe
Q psy15417        172 LRIW  175 (176)
Q Consensus       172 v~vw  175 (176)
                      |.-+
T Consensus       315 i~~~  318 (327)
T 2xbg_A          315 LLRY  318 (327)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7655

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.69  E-value=0.0016  Score=52.19  Aligned_cols=79  Identities=13%  Similarity=0.095  Sum_probs=49.2

Q ss_pred             CCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCcc-EEEEEEeCCCC
Q psy15417         83 DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR-VSCLGVTEDGM  161 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~  161 (176)
                      ++.+..||+.+++.+........... ..+.  ..+.+++.|+.|+.++.+|.++++.+..+...... -..+.+..+|.
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~~~~~-g~~~--tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~  541 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHLPLWA-GVLA--TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCS-CCEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             cceEEEEECCCCCEEEEecCCCCCcc-cceE--eCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence            57789999998877655443221111 0111  13456677899999999999999988877643322 12355656665


Q ss_pred             -EEE
Q psy15417        162 -AVA  164 (176)
Q Consensus       162 -~l~  164 (176)
                       |++
T Consensus       542 qYv~  545 (582)
T 1flg_A          542 QYLG  545 (582)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence             443

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.67  E-value=0.0054  Score=47.27  Aligned_cols=155  Identities=10%  Similarity=0.021  Sum_probs=87.7

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCC---Ce-EEEEEcCCCee-eeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACD---AS-AKLWDIRDGSC-KQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~d---g~-v~~wd~~~~~~-~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      ......++|++++.++++-...   .. +...+...+.. ...+. .-.....++++| ++..+++-...+.|..++..+
T Consensus       181 ~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~  259 (433)
T 4hw6_A          181 IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT  259 (433)
T ss_dssp             CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT
T ss_pred             CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC
Confidence            3457889999999955554321   12 33333322211 11222 123456788999 777777776778899998875


Q ss_pred             CCe-eeEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCC--Ccee--eeeecC---------------CCccEE
Q psy15417         94 DQE-LAMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSM--KTER--AGILAG---------------HDNRVS  152 (176)
Q Consensus        94 ~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~--~~~~--~~~~~~---------------~~~~i~  152 (176)
                      +.. ......... .....++|+|++. ++++-..++.|+.++..  .++.  ...+.+               .-..-.
T Consensus       260 g~~~~~~~~~~~~-~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~  338 (433)
T 4hw6_A          260 GTLTEEEVMMDTK-GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPN  338 (433)
T ss_dssp             CCEEEEEEECSCC-SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEE
T ss_pred             CeEEEEEeccCCC-CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCc
Confidence            544 122221111 1123589999998 55666677889997743  2211  011111               112345


Q ss_pred             EEEE---------eCCCCEEEEccCCCcEEEeC
Q psy15417        153 CLGV---------TEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       153 ~~~~---------~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .+++         .+++.++++-...++|+.++
T Consensus       339 giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~  371 (433)
T 4hw6_A          339 QGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT  371 (433)
T ss_dssp             EEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred             cEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence            6888         66676767766777887764

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.64  E-value=0.0085  Score=43.60  Aligned_cols=151  Identities=13%  Similarity=-0.018  Sum_probs=87.1

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCeee
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQELA   98 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~   98 (176)
                      .....++|++++.++++-..++.|..||.+.. ....+. ....+.++++.++++.+++.....  .+..++..+++...
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~  109 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET  109 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence            45678999999987777767899999998754 333333 234688999999998766654432  36556766655432


Q ss_pred             EEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce--eee--------eecCCCccEEEEEEeCCCCEE-EEcc
Q psy15417         99 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE--RAG--------ILAGHDNRVSCLGVTEDGMAV-ATGS  167 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~--~~~--------~~~~~~~~i~~~~~~~~~~~l-~tg~  167 (176)
                      ....... .....++..+++..+++-..++.+.++|...++  ...        ...........+  ++++..| ++-.
T Consensus       110 ~~~~~~~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~  186 (306)
T 2p4o_A          110 LLTLPDA-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT  186 (306)
T ss_dssp             EEECTTC-SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred             EEeCCCc-cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence            2222111 112334445555566665568889899865432  110        000111123344  6666544 4555


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      ..+.|..||
T Consensus       187 ~~~~I~~~~  195 (306)
T 2p4o_A          187 EKMLLLRIP  195 (306)
T ss_dssp             TTTEEEEEE
T ss_pred             CCCEEEEEE
Confidence            566777663

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.60  E-value=0.01  Score=44.09  Aligned_cols=115  Identities=11%  Similarity=0.078  Sum_probs=81.0

Q ss_pred             CeEEEEE---cCCCCEEEEEe-------------CCCeEEEEEcC---CCeeeeEecC-------------CCCCeeEEE
Q psy15417         22 DVMSLSL---APDMRTFVSGA-------------CDASAKLWDIR---DGSCKQTFPG-------------HESDINAVT   69 (176)
Q Consensus        22 ~V~~~~~---~~~~~~l~s~s-------------~dg~v~~wd~~---~~~~~~~~~~-------------h~~~v~~v~   69 (176)
                      .+..+.|   .|+++++++..             .+..+..+|+.   +++......-             -....+.++
T Consensus        64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva  143 (334)
T 2p9w_A           64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA  143 (334)
T ss_dssp             EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred             eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence            4578999   68877777543             25778999999   7776554431             112488999


Q ss_pred             EccCCcEEEEeeCC-CcEEEeeCCCCCeeeEEeec----ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417         70 FFPNGWAFATGSDD-ATCRLFDIRADQELAMYSHD----NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus        70 ~~~~~~~l~s~s~d-~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~  137 (176)
                      ..++|+.+++++.. +.|...+.... .+..+...    ......+-++++|++..|++....+.+..+|+..
T Consensus       144 vD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          144 QDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             ECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             ECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            99999999999888 88777765433 33322211    1123466899999999888877799999999764

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.57  E-value=0.007  Score=48.68  Aligned_cols=75  Identities=9%  Similarity=0.048  Sum_probs=52.8

Q ss_pred             EEEcCCCCEEEEEeCCC----------------eEEEEEcCCCeeeeEecCCC----------CCeeEEEEc-cCC---c
Q psy15417         26 LSLAPDMRTFVSGACDA----------------SAKLWDIRDGSCKQTFPGHE----------SDINAVTFF-PNG---W   75 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~dg----------------~v~~wd~~~~~~~~~~~~h~----------~~v~~v~~~-~~~---~   75 (176)
                      +++.+...+++.+..++                .|..+|.++|+.+..++...          .++. +... .+|   .
T Consensus       246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~  324 (599)
T 1w6s_A          246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARK  324 (599)
T ss_dssp             CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred             eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEE
Confidence            45667777777776653                79999999999988877532          1221 2222 456   5


Q ss_pred             EEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417         76 AFATGSDDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        76 ~l~s~s~d~~i~iwd~~~~~~~~~~~  101 (176)
                      .++.++.+|.+.+.|.++++.+....
T Consensus       325 ~v~~~~~~G~l~~lD~~tG~~lw~~~  350 (599)
T 1w6s_A          325 LLTHPDRNGIVYTLDRTDGALVSANK  350 (599)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEEECCCcEEEEEECCCCCEeeccc
Confidence            67888899999999998887765443

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.56  E-value=0.013  Score=43.68  Aligned_cols=149  Identities=7%  Similarity=0.009  Sum_probs=85.1

Q ss_pred             eEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCC-CcEEEeeCCCCCeeeE
Q psy15417         23 VMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDD-ATCRLFDIRADQELAM   99 (176)
Q Consensus        23 V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d-~~i~iwd~~~~~~~~~   99 (176)
                      ...+++++.+. ++.+-...+.|.+.+++.......+...-...+++++.|. +..+++-... +.|...++........
T Consensus       118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~  197 (349)
T 3v64_C          118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII  197 (349)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES
T ss_pred             ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE
Confidence            45788887544 5555556678999998754333333333356789999985 5555555444 6788887754322211


Q ss_pred             EeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417        100 YSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      .. .. ....+.++++|++ .++++=...+.|..+|...................+++. ++..+++-...+.|..
T Consensus       198 ~~-~~-~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~  270 (349)
T 3v64_C          198 AD-TH-LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINS  270 (349)
T ss_dssp             CC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred             EE-CC-CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEE
Confidence            11 11 1234678999754 555665667789999865433222222223344567774 3444445444555543

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.56  E-value=0.015  Score=44.26  Aligned_cols=153  Identities=6%  Similarity=-0.064  Sum_probs=89.3

Q ss_pred             cCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCC----eeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCC
Q psy15417         21 GDVMSLSLAPDMRTF-VSGACDASAKLWDIRDG----SCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ..+..++|++....| .+-...+.|..++++..    .....+...-....++++.+ .++.+++-...+.|.+.++...
T Consensus       112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~  191 (400)
T 3p5b_L          112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  191 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred             CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence            467789999865544 44445677888888652    22223332345678899997 5666666667788999888655


Q ss_pred             CeeeEEeecceEeceEEEEECCCC-cEEEEEcC-CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCc
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSG-RLLLAGYD-DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSF  171 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~-d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~  171 (176)
                      ......... . .....++++|.+ .++.+-.. .+.|...++...............-..+++.+++..| ++=+..+.
T Consensus       192 ~~~~l~~~~-~-~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~  269 (400)
T 3p5b_L          192 KRKTLFREN-G-SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS  269 (400)
T ss_dssp             SEEEEEECS-S-CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             ceEEEEeCC-C-CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence            433332211 1 234678899854 44444322 4678888865433333323333456788999765544 44344555


Q ss_pred             EEEe
Q psy15417        172 LRIW  175 (176)
Q Consensus       172 v~vw  175 (176)
                      |..+
T Consensus       270 I~~~  273 (400)
T 3p5b_L          270 ISSI  273 (400)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6554

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.54  E-value=0.027  Score=46.80  Aligned_cols=153  Identities=7%  Similarity=-0.040  Sum_probs=88.6

Q ss_pred             cCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCC----eeeeEecCCCCCeeEEEEccCC-cEEEEeeCCCcEEEeeCCCC
Q psy15417         21 GDVMSLSLAPDM-RTFVSGACDASAKLWDIRDG----SCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        21 ~~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ..+..++|++.. .++.+-...+.|+.+++...    .....+...-....++++.+.+ +++++-...+.|.+.++...
T Consensus       424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~  503 (791)
T 3m0c_C          424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  503 (791)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence            456788998854 45555555677888888642    2223333233557789998765 56666666788999998754


Q ss_pred             CeeeEEeecceEeceEEEEECCC-CcEEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCc
Q psy15417         95 QELAMYSHDNIICGITSVAFSRS-GRLLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSF  171 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~  171 (176)
                      ....+.... . .....|+++|. +.++++-... ..|.+.++..................|++.+.+..| ++=...+.
T Consensus       504 ~~~~l~~~~-l-~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~  581 (791)
T 3m0c_C          504 KRKTLFREN-G-SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS  581 (791)
T ss_dssp             SEEEEEECT-T-CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             eEEEEEeCC-C-CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence            433332211 1 23557899987 4555554333 678888865444333333333456788888654443 33334445


Q ss_pred             EEEe
Q psy15417        172 LRIW  175 (176)
Q Consensus       172 v~vw  175 (176)
                      |..+
T Consensus       582 I~~~  585 (791)
T 3m0c_C          582 ISSI  585 (791)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5443

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.52  E-value=0.011  Score=43.02  Aligned_cols=135  Identities=11%  Similarity=0.010  Sum_probs=78.0

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCCCee-eeEe---------cCCCCCeeEEEEccCCcE-EEEeeCCCcEEEeeCCC-
Q psy15417         26 LSLAPDMRTFVSGACDASAKLWDIRDGSC-KQTF---------PGHESDINAVTFFPNGWA-FATGSDDATCRLFDIRA-   93 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~dg~v~~wd~~~~~~-~~~~---------~~h~~~v~~v~~~~~~~~-l~s~s~d~~i~iwd~~~-   93 (176)
                      +...+++..+++-..++.|..+|..+++. +...         ...-...+.+  +|++.. +++-...+.|..+++.. 
T Consensus       122 ~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~  199 (306)
T 2p4o_A          122 ITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDST  199 (306)
T ss_dssp             EEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTT
T ss_pred             ccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCC
Confidence            33344444445544578888888876531 1100         0111234566  777754 45555667899999864 


Q ss_pred             CCe--eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee--eecCCCccEEEEEEe---CCCCEEEEc
Q psy15417         94 DQE--LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG--ILAGHDNRVSCLGVT---EDGMAVATG  166 (176)
Q Consensus        94 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~---~~~~~l~tg  166 (176)
                      +..  ...+...   .....++++++|.++++-...+.|.++|.. ++...  .+........+++|.   |++..|...
T Consensus       200 g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt  275 (306)
T 2p4o_A          200 DKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVV  275 (306)
T ss_dssp             SCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred             CCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEE
Confidence            221  1111111   112347889999988888778899999954 54422  233333557889998   786655443

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.44  E-value=0.021  Score=43.17  Aligned_cols=149  Identities=6%  Similarity=-0.030  Sum_probs=84.0

Q ss_pred             EEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCC-CcEEEeeCCCCCeeeEE
Q psy15417         24 MSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDD-ATCRLFDIRADQELAMY  100 (176)
Q Consensus        24 ~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d-~~i~iwd~~~~~~~~~~  100 (176)
                      ..+++++.+. ++++-...+.|.+.+++.......+...-...+++++.|.+. .+++-... +.|...++.........
T Consensus       162 ~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~  241 (386)
T 3v65_B          162 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA  241 (386)
T ss_dssp             CCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred             cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence            4577776444 445555567788888764433333333335678999998654 44544444 67887777543332222


Q ss_pred             eecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        101 SHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       101 ~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      . .. ....+.++++|+ +.++++=...+.|..+|...................+++. ++..+++-...+.|..+
T Consensus       242 ~-~~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~  314 (386)
T 3v65_B          242 D-TH-LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSA  314 (386)
T ss_dssp             C-SS-CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred             E-CC-CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEE
Confidence            1 11 123467899875 4555666667789999865433222222223344667774 34455555555566543

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.41  E-value=0.0015  Score=52.88  Aligned_cols=114  Identities=18%  Similarity=0.235  Sum_probs=72.0

Q ss_pred             EEEEcC-CCCEEEEEeCCC-----------eEEEEEcCCCee--eeEecC-CCCCeeEEEEccCCcEEEEeeC-CCcEEE
Q psy15417         25 SLSLAP-DMRTFVSGACDA-----------SAKLWDIRDGSC--KQTFPG-HESDINAVTFFPNGWAFATGSD-DATCRL   88 (176)
Q Consensus        25 ~~~~~~-~~~~l~s~s~dg-----------~v~~wd~~~~~~--~~~~~~-h~~~v~~v~~~~~~~~l~s~s~-d~~i~i   88 (176)
                      .+++.+ ++++++.|+.+.           .+.+||..+++-  +..+.. +.....++++.++++.++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            445666 888888887643           578999988752  223322 2333446778889999999985 457999


Q ss_pred             eeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CC-----CeEEEEeCCCce
Q psy15417         89 FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DD-----FNCNVWDSMKTE  139 (176)
Q Consensus        89 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d-----~~i~v~d~~~~~  139 (176)
                      ||..+.+ ............-.++.+.+++++++.|+ .+     ..+.+||..+.+
T Consensus       270 yd~~t~~-W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~  325 (656)
T 1k3i_A          270 YDSSSDS-WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  325 (656)
T ss_dssp             EEGGGTE-EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             ecCcCCc-eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence            9987542 22211111111112445667889998888 34     468899976654

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.41  E-value=0.013  Score=48.22  Aligned_cols=150  Identities=13%  Similarity=0.112  Sum_probs=79.1

Q ss_pred             EEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCee--eeEecC-CCCCeeEEEEccCCcEEEEeeCC---CcEEEeeCC
Q psy15417         24 MSLSLAPDMRTFVSGACD-----ASAKLWDIRDGSC--KQTFPG-HESDINAVTFFPNGWAFATGSDD---ATCRLFDIR   92 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~d-----g~v~~wd~~~~~~--~~~~~~-h~~~v~~v~~~~~~~~l~s~s~d---~~i~iwd~~   92 (176)
                      ..+.|+||++.|+....+     ..|..+++.++..  ...+.. ...-..++.|+|++++|+..+.+   ..+.++|+.
T Consensus       224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~  303 (751)
T 2xe4_A          224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR  303 (751)
T ss_dssp             SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred             eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence            357899999877666655     2577888877642  223332 22345678999999876655432   347777876


Q ss_pred             CCC-ee--eEEeecceEeceEEEEECCCCcEEEEEcCC----CeEEEEeCCCceeeee-ecCCCc--cEEEEEEeCCCCE
Q psy15417         93 ADQ-EL--AMYSHDNIICGITSVAFSRSGRLLLAGYDD----FNCNVWDSMKTERAGI-LAGHDN--RVSCLGVTEDGMA  162 (176)
Q Consensus        93 ~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d----~~i~v~d~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~  162 (176)
                      ++. ..  ....... .....++.|+..+.+++....+    ..+..+++........ +..+..  .+..+++. .+..
T Consensus       304 ~~~~~~~~~~l~~~~-~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~l  381 (751)
T 2xe4_A          304 KGNAHNTLEIVRPRE-KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYL  381 (751)
T ss_dssp             SCTTCCCEEESSCCC-TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEE
T ss_pred             CCCCCceeEEeecCC-CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEE
Confidence            542 11  2111111 1122345545445555555443    3566677653211122 223333  34444444 2334


Q ss_pred             EEEccCCCcEEEe
Q psy15417        163 VATGSWDSFLRIW  175 (176)
Q Consensus       163 l~tg~~d~~v~vw  175 (176)
                      +++...++..++|
T Consensus       382 v~~~~~~g~~~l~  394 (751)
T 2xe4_A          382 VVAGRRAGLTRIW  394 (751)
T ss_dssp             EEEEEETTEEEEE
T ss_pred             EEEEEeCCEEEEE
Confidence            5566666765554

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.40  E-value=0.041  Score=45.46  Aligned_cols=138  Identities=10%  Similarity=0.089  Sum_probs=87.9

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec----CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP----GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ...|.++...+++..|..|+.++-+..||.++++......    .+...|.++...+++...+...  +.+..||..+++
T Consensus       405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~  482 (795)
T 4a2l_A          405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRS  482 (795)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTE
T ss_pred             CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCe
Confidence            3578999988888856667777779999998876433221    1245688998888887555543  458888876543


Q ss_pred             eeeEEeec----c-eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-------CCCccEEEEEEeCCCCEE
Q psy15417         96 ELAMYSHD----N-IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-------GHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        96 ~~~~~~~~----~-~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l  163 (176)
                      . ..+...    . ....+.++...+++.+.+... + -+..||..+.+.  .+.       .....|.++...++|...
T Consensus       483 ~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lW  557 (795)
T 4a2l_A          483 F-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIW  557 (795)
T ss_dssp             E-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEE
T ss_pred             E-EEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEE
Confidence            2 222211    0 113477888888888776654 4 477788655443  211       123468888888877654


Q ss_pred             E
Q psy15417        164 A  164 (176)
Q Consensus       164 ~  164 (176)
                      +
T Consensus       558 i  558 (795)
T 4a2l_A          558 V  558 (795)
T ss_dssp             E
T ss_pred             E
Confidence            3

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.40  E-value=0.041  Score=45.43  Aligned_cols=143  Identities=11%  Similarity=0.055  Sum_probs=91.3

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--------CCCCeeEEEEccCCcEEEEeeCCCcEEEeeC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--------HESDINAVTFFPNGWAFATGSDDATCRLFDI   91 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--------h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~   91 (176)
                      ...|.++...+++.+- .|+.++-+..||..+++.......        ....|.+++..+++..+..|..++.+..+|.
T Consensus       356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~  434 (795)
T 4a2l_A          356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR  434 (795)
T ss_dssp             CSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred             CCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence            4569999988887755 466676799999887754332211        1356889988888875666777778999998


Q ss_pred             CCCCeeeEEeec---ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec------CCCccEEEEEEeCCCCE
Q psy15417         92 RADQELAMYSHD---NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA------GHDNRVSCLGVTEDGMA  162 (176)
Q Consensus        92 ~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~  162 (176)
                      ++++.. .+...   .....|.++...+++.+.+... + -+..||..+++......      -....|.++...++|..
T Consensus       435 ~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l  511 (795)
T 4a2l_A          435 NSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL  511 (795)
T ss_dssp             TTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE
T ss_pred             CCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE
Confidence            765432 22210   0113477888888888666654 4 47788876654332211      12356888888887765


Q ss_pred             EEEc
Q psy15417        163 VATG  166 (176)
Q Consensus       163 l~tg  166 (176)
                      .+..
T Consensus       512 Wigt  515 (795)
T 4a2l_A          512 WIGG  515 (795)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            4433

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.37  E-value=0.023  Score=41.85  Aligned_cols=152  Identities=7%  Similarity=-0.005  Sum_probs=87.9

Q ss_pred             CeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeee-eEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         22 DVMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCK-QTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        22 ~V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~-~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      ....++|++.. .++.+-...+.|..++++.+... ..+...-....++++.+ .++.+++-...+.|.+.++.......
T Consensus        36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~  115 (318)
T 3sov_A           36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV  115 (318)
T ss_dssp             EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence            45688898854 45555556678888888765321 22222224567899987 56666776667889999986543322


Q ss_pred             EEeecceEeceEEEEECCCC-cEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC-EEEEccCCCcEEEe
Q psy15417         99 MYSHDNIICGITSVAFSRSG-RLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM-AVATGSWDSFLRIW  175 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~-~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~tg~~d~~v~vw  175 (176)
                      ... .. ......++++|.+ .++.+-. ..+.|...+.............-..-..+++++++. .+.+=+..+.|..+
T Consensus       116 l~~-~~-~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~  193 (318)
T 3sov_A          116 LFW-QE-LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS  193 (318)
T ss_dssp             EEC-SS-CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEe-CC-CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEE
Confidence            221 11 1234678888864 4444432 357788888543222222222233457889998544 44454555566554

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.36  E-value=0.02  Score=46.29  Aligned_cols=73  Identities=12%  Similarity=0.133  Sum_probs=47.9

Q ss_pred             CeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCeeeeEecCCCCCe-eEEEEccCCcEEEEee-CC-----CcEEEeeCCC
Q psy15417         22 DVMSLSLAPDMRTFVSGAC-DASAKLWDIRDGSCKQTFPGHESDI-NAVTFFPNGWAFATGS-DD-----ATCRLFDIRA   93 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~~~~~~~~~h~~~v-~~v~~~~~~~~l~s~s-~d-----~~i~iwd~~~   93 (176)
                      ...++++..++++++.|+. +..+.+||..+++-...-..+...- -++++.++++.++.|+ .+     ..+.+||..+
T Consensus       244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t  323 (656)
T 1k3i_A          244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS  323 (656)
T ss_dssp             SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred             ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence            3345677889999999985 4579999998775322111122221 3456667899988888 34     4688888764


Q ss_pred             C
Q psy15417         94 D   94 (176)
Q Consensus        94 ~   94 (176)
                      +
T Consensus       324 ~  324 (656)
T 1k3i_A          324 K  324 (656)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.28  E-value=0.0095  Score=47.91  Aligned_cols=141  Identities=10%  Similarity=0.062  Sum_probs=84.8

Q ss_pred             EEEEeCCCeEEEEEcCCCeeeeEecCCC----CCeeEEEEccCCcEEEEee-----CCCcEEEeeCCCCCeeeEEeecce
Q psy15417         35 FVSGACDASAKLWDIRDGSCKQTFPGHE----SDINAVTFFPNGWAFATGS-----DDATCRLFDIRADQELAMYSHDNI  105 (176)
Q Consensus        35 l~s~s~dg~v~~wd~~~~~~~~~~~~h~----~~v~~v~~~~~~~~l~s~s-----~d~~i~iwd~~~~~~~~~~~~~~~  105 (176)
                      ++.++.|+.+..+|.++|+.+.......    ..+.+--...++..++.++     .++.|.-+|.++++.+..+.....
T Consensus       124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~  203 (599)
T 1w6s_A          124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP  203 (599)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred             EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCC
Confidence            7888889999999999999887765322    0122110112454443332     478999999999887655543221


Q ss_pred             Eec-----------------------------------e-EEEEECCCCcEEEEEcCC----------------CeEEEE
Q psy15417        106 ICG-----------------------------------I-TSVAFSRSGRLLLAGYDD----------------FNCNVW  133 (176)
Q Consensus       106 ~~~-----------------------------------v-~~~~~~~~~~~l~~g~~d----------------~~i~v~  133 (176)
                      ...                                   + ...++.++...++.+..+                ..+..+
T Consensus       204 ~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al  283 (599)
T 1w6s_A          204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR  283 (599)
T ss_dssp             HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred             ccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE
Confidence            100                                   0 123455666666666554                378899


Q ss_pred             eCCCceeeeeecC--CC--------ccEEEEEEe-CCC---CEEEEccCCCcEEEeC
Q psy15417        134 DSMKTERAGILAG--HD--------NRVSCLGVT-EDG---MAVATGSWDSFLRIWN  176 (176)
Q Consensus       134 d~~~~~~~~~~~~--~~--------~~i~~~~~~-~~~---~~l~tg~~d~~v~vwd  176 (176)
                      |..+++....++.  |.        ..+. +... .+|   ..++.++.+|.+.++|
T Consensus       284 d~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD  339 (599)
T 1w6s_A          284 DADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLD  339 (599)
T ss_dssp             ETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEE
T ss_pred             eCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEE
Confidence            9998887766543  21        1121 2222 456   4677788888887764

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.25  E-value=0.0069  Score=42.46  Aligned_cols=141  Identities=11%  Similarity=0.056  Sum_probs=79.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee------eeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC------KQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~------~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+..++|+|++.+.+.  .+|.+.-.+..++..      -..+-  +... -.++.|.|++.+.++  .||.|.-++..+
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~  116 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ  116 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence            5669999999886666  577666555544211      11111  1111 478899999988877  558887777533


Q ss_pred             CC--ee----eEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee-----eeeec--CCCccEEEEEEeCCC
Q psy15417         94 DQ--EL----AMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER-----AGILA--GHDNRVSCLGVTEDG  160 (176)
Q Consensus        94 ~~--~~----~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~-----~~~~~--~~~~~i~~~~~~~~~  160 (176)
                      ..  ..    .+.....- ..+..+.+.|+|.+.++.  ++.++-........     .....  .......-+.|.+++
T Consensus       117 ~~~~~Wl~~a~~vg~~gw-~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G  193 (236)
T 1tl2_A          117 SDTDNWIARATEVGSGGW-SGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG  193 (236)
T ss_dssp             STTCCHHHHSEEEECSSG-GGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred             CCCCceeccccEeccCCC-CceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence            21  11    11111000 246789999999988877  77754443221110     01111  222234556788888


Q ss_pred             CEEEEccCCCcE
Q psy15417        161 MAVATGSWDSFL  172 (176)
Q Consensus       161 ~~l~tg~~d~~v  172 (176)
                      ...+.-  ++.+
T Consensus       194 ~l~~v~--~g~~  203 (236)
T 1tl2_A          194 TLFGVQ--GGKF  203 (236)
T ss_dssp             CEEEEE--TTEE
T ss_pred             cEEEEe--CCeE
Confidence            766544  5543

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.23  E-value=0.043  Score=42.19  Aligned_cols=152  Identities=9%  Similarity=0.006  Sum_probs=91.2

Q ss_pred             eEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCCC--Ce-
Q psy15417         23 VMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGW-AFATGSDDATCRLFDIRAD--QE-   96 (176)
Q Consensus        23 V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~~--~~-   96 (176)
                      ...++++| ++.++++-..++.|..++...+........ .....+.++|+|+++ .+++-...+.|..++....  .. 
T Consensus       228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~  307 (430)
T 3tc9_A          228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLT  307 (430)
T ss_dssp             CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEC
T ss_pred             ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccccccc
Confidence            45678899 677777766778899999987764222222 123468899999998 4555556778988876432  11 


Q ss_pred             -eeEEe-e------cc------eEeceE-EEEE--------CCCCcEEEEEcCCCeEEEEeCCCceeeeeec-------C
Q psy15417         97 -LAMYS-H------DN------IICGIT-SVAF--------SRSGRLLLAGYDDFNCNVWDSMKTERAGILA-------G  146 (176)
Q Consensus        97 -~~~~~-~------~~------~~~~v~-~~~~--------~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-------~  146 (176)
                       ...+. .      ..      ...... .+.+        .+++.++++=..+..|+.++ ..++......       +
T Consensus       308 ~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G  386 (430)
T 3tc9_A          308 TPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSG  386 (430)
T ss_dssp             CCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSS
T ss_pred             ceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCc
Confidence             11111 0      00      000112 3444        24577777777788899998 4454322221       0


Q ss_pred             ----------CCccEEEEEEeC-CCCEEEEccCCCcEEEe
Q psy15417        147 ----------HDNRVSCLGVTE-DGMAVATGSWDSFLRIW  175 (176)
Q Consensus       147 ----------~~~~i~~~~~~~-~~~~l~tg~~d~~v~vw  175 (176)
                                .-..-..+++.| ++.++++-..++.|+.+
T Consensus       387 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i  426 (430)
T 3tc9_A          387 YNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI  426 (430)
T ss_dssp             CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred             ccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence                      012457899998 46666676667778765

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.21  E-value=0.039  Score=41.19  Aligned_cols=100  Identities=13%  Similarity=0.208  Sum_probs=58.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--eEec---CCCCCeeEEEEccC----CcEEEEeeCC-----CcEE
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFP---GHESDINAVTFFPN----GWAFATGSDD-----ATCR   87 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~~---~h~~~v~~v~~~~~----~~~l~s~s~d-----~~i~   87 (176)
                      .-..++|.|+++++++ ..+|.|.+++  .++..  ..+.   ........++|+|+    +..+++-...     +.|.
T Consensus        32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            4568999999985555 5679999998  44421  1221   12356889999998    5555554432     5677


Q ss_pred             EeeCCCCCe---eeEEe-ec---ceEeceEEEEECCCCcEEEEE
Q psy15417         88 LFDIRADQE---LAMYS-HD---NIICGITSVAFSRSGRLLLAG  124 (176)
Q Consensus        88 iwd~~~~~~---~~~~~-~~---~~~~~v~~~~~~~~~~~l~~g  124 (176)
                      .++...+..   ...+. ..   ........++|.|+|.++++-
T Consensus       109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~  152 (352)
T 2ism_A          109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT  152 (352)
T ss_dssp             EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred             EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence            777654311   11111 11   100123478999999877764

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.20  E-value=0.033  Score=41.67  Aligned_cols=102  Identities=15%  Similarity=0.178  Sum_probs=58.9

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe-eeeEec---CCCCCeeEEEEccC----CcEEEEeeC---C----Cc
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS-CKQTFP---GHESDINAVTFFPN----GWAFATGSD---D----AT   85 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~-~~~~~~---~h~~~v~~v~~~~~----~~~l~s~s~---d----~~   85 (176)
                      ..-..++|.|+++++++ ..+|.|.++| ..++ ....+.   ........++++|+    +..+++-+.   +    +.
T Consensus        29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~  106 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR  106 (354)
T ss_dssp             SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred             CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence            34578999999885554 5679999887 4454 222221   12346889999997    555555442   3    45


Q ss_pred             EEEeeCCCCC-ee----eEEe-ec-ceEeceEEEEECCCCcEEEEE
Q psy15417         86 CRLFDIRADQ-EL----AMYS-HD-NIICGITSVAFSRSGRLLLAG  124 (176)
Q Consensus        86 i~iwd~~~~~-~~----~~~~-~~-~~~~~v~~~~~~~~~~~l~~g  124 (176)
                      |..++..... .+    ..+. .. ........+.|.|++.++++-
T Consensus       107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~  152 (354)
T 3a9g_A          107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT  152 (354)
T ss_dssp             EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred             EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence            6667665431 11    1111 11 000123468999999877764

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.04  E-value=0.0031  Score=51.64  Aligned_cols=153  Identities=6%  Similarity=-0.052  Sum_probs=82.4

Q ss_pred             CeEEEEEcCCCCEEEEE-eCCCeEEEEEcCC----CeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         22 DVMSLSLAPDMRTFVSG-ACDASAKLWDIRD----GSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~-s~dg~v~~wd~~~----~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      .+..++|++.+..|+.. ...+.|..+++..    ......+...-....++++.+ .++++++-...+.|.+.++....
T Consensus       407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~  486 (699)
T 1n7d_A          407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK  486 (699)
T ss_dssp             TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred             ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence            34578888866655544 3457788888875    222222221122356788885 45566665667889999876543


Q ss_pred             eeeEEeecceEeceEEEEECCCCc-EEEEEcCC-CeEEEEeCCCceeeeeecCCCccEEEEEEeCC-CCEEEEccCCCcE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGR-LLLAGYDD-FNCNVWDSMKTERAGILAGHDNRVSCLGVTED-GMAVATGSWDSFL  172 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d-~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~tg~~d~~v  172 (176)
                      ........ . .....++++|.+. ++++-... +.|.+.++...............-..|+++|+ +.++++-+..+.|
T Consensus       487 ~~~l~~~~-~-~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I  564 (699)
T 1n7d_A          487 RKTLFREQ-G-SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI  564 (699)
T ss_dssp             EEEECCCS-S-CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred             eEEEEeCC-C-CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence            32222211 1 1234678888654 44443222 67877775432221111112233456889876 4444555556667


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ..+|
T Consensus       565 ~~~d  568 (699)
T 1n7d_A          565 SSID  568 (699)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            6654

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=96.96  E-value=0.071  Score=39.90  Aligned_cols=144  Identities=15%  Similarity=0.103  Sum_probs=79.2

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--eEec----CCCCCeeEEEEccC----CcEEEEee--CCCcEEE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFP----GHESDINAVTFFPN----GWAFATGS--DDATCRL   88 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~~----~h~~~v~~v~~~~~----~~~l~s~s--~d~~i~i   88 (176)
                      ..-+.|+|.|++.++++--..|.|++++...++..  ..+.    ........++++|+    +..+++-+  .++.|.-
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R  111 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR  111 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence            44578999999997777655899999987665432  2221    22456889999985    55555432  3445555


Q ss_pred             eeCCCCC--------eeeEEe-ecc-eEeceEEEEECCCCcEEEEEcC-------------CCeEEEEeCCCc-------
Q psy15417         89 FDIRADQ--------ELAMYS-HDN-IICGITSVAFSRSGRLLLAGYD-------------DFNCNVWDSMKT-------  138 (176)
Q Consensus        89 wd~~~~~--------~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~g~~-------------d~~i~v~d~~~~-------  138 (176)
                      |.+...+        ....+. ... ....-..+.|.|++.++++.+.             .+.|.-.+....       
T Consensus       112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf  191 (347)
T 3das_A          112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF  191 (347)
T ss_dssp             EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred             EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence            5544311        111111 110 0012346899999987777432             244444443221       


Q ss_pred             -eeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417        139 -ERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus       139 -~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                       .....-.+|.+. ..++|.|++.+.++
T Consensus       192 ~~~~i~a~G~RNp-~Gla~dp~G~L~~~  218 (347)
T 3das_A          192 PGSPVYSYGHRNV-QGLAWDDKQRLFAS  218 (347)
T ss_dssp             TTCCEEEBCCSBC-CEEEECTTCCEEEE
T ss_pred             CCCeEEeeCCCCc-ceEEECCCCCEEEE
Confidence             011111244444 46789888766543

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.95  E-value=0.071  Score=39.78  Aligned_cols=104  Identities=12%  Similarity=0.142  Sum_probs=57.8

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec-------CCCCCeeEEEEccC----CcEEEEeeC-------
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-------GHESDINAVTFFPN----GWAFATGSD-------   82 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~~~----~~~l~s~s~-------   82 (176)
                      .....|+|.|+++.++.+...|.|++++.. ++....+.       ........++++|+    +..+++-..       
T Consensus        18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~   96 (353)
T 2g8s_A           18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA   96 (353)
T ss_dssp             SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred             CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence            345789999999834455668999999853 33221111       12345789999995    655555433       


Q ss_pred             CCcEEEeeCCCCC-ee----eEEe-ec---ceEeceEEEEECCCCcEEEEEc
Q psy15417         83 DATCRLFDIRADQ-EL----AMYS-HD---NIICGITSVAFSRSGRLLLAGY  125 (176)
Q Consensus        83 d~~i~iwd~~~~~-~~----~~~~-~~---~~~~~v~~~~~~~~~~~l~~g~  125 (176)
                      ...|..+++..+. .+    ..+. ..   ........+.|.|++.++++-+
T Consensus        97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  148 (353)
T 2g8s_A           97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG  148 (353)
T ss_dssp             EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred             eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence            2245556554321 11    1111 11   0001134689999997766643

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.90  E-value=0.081  Score=39.64  Aligned_cols=135  Identities=9%  Similarity=0.148  Sum_probs=82.3

Q ss_pred             CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC----c---EEEEeeC---CCcEEEeeCC-CCCeeeEEe
Q psy15417         33 RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG----W---AFATGSD---DATCRLFDIR-ADQELAMYS  101 (176)
Q Consensus        33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~----~---~l~s~s~---d~~i~iwd~~-~~~~~~~~~  101 (176)
                      .+++.....+-+.+||+ .|+.+..++.  +.++.+.+.|+-    +   .+++..+   ++++.+|++. ....+....
T Consensus        41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~  117 (355)
T 3amr_A           41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT  117 (355)
T ss_dssp             CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred             cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence            45665666778999999 7888888864  678988888742    2   2344444   4789999773 222333321


Q ss_pred             e-----cceEeceEEEEE--CCC-Cc-EEEEEcCCCeEEEEeCC-------CceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417        102 H-----DNIICGITSVAF--SRS-GR-LLLAGYDDFNCNVWDSM-------KTERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus       102 ~-----~~~~~~v~~~~~--~~~-~~-~l~~g~~d~~i~v~d~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      .     ......+.-+++  +|. +. ++++...++.+..|++.       ..+.+.++.- ...+..+.+.+....|..
T Consensus       118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv  196 (355)
T 3amr_A          118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYI  196 (355)
T ss_dssp             CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEE
T ss_pred             ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEE
Confidence            1     000012222344  553 43 67777888999888862       2344555543 345667778877778878


Q ss_pred             ccCCCc
Q psy15417        166 GSWDSF  171 (176)
Q Consensus       166 g~~d~~  171 (176)
                      +-+|.-
T Consensus       197 ~eEd~G  202 (355)
T 3amr_A          197 AEEDEA  202 (355)
T ss_dssp             EETTTE
T ss_pred             ecccce
Confidence            877744

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.89  E-value=0.099  Score=40.52  Aligned_cols=105  Identities=12%  Similarity=0.193  Sum_probs=59.8

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--eEecC------CCCCeeEEEEcc----CCcEEEEeeC------
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFPG------HESDINAVTFFP----NGWAFATGSD------   82 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~~~------h~~~v~~v~~~~----~~~~l~s~s~------   82 (176)
                      ...+.|+|.|+++++++-...+.|.+++..+++..  ..+..      ....+..++|+|    ++..+++-+.      
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~  106 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST  106 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence            34579999999997776544357888886655432  22321      235677999999    4555555542      


Q ss_pred             ------CCcEEEeeCCCCC-ee----eEEe-ecc-eEeceEEEEECCCCcEEEEEc
Q psy15417         83 ------DATCRLFDIRADQ-EL----AMYS-HDN-IICGITSVAFSRSGRLLLAGY  125 (176)
Q Consensus        83 ------d~~i~iwd~~~~~-~~----~~~~-~~~-~~~~v~~~~~~~~~~~l~~g~  125 (176)
                            ...|.-++..... .+    ..+. ... .......+.|.|+|.++++.+
T Consensus       107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence                  1244445543211 11    1111 110 001256899999998777644

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.88  E-value=0.14  Score=42.14  Aligned_cols=152  Identities=9%  Similarity=0.056  Sum_probs=91.0

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      ....|.++...+++.+.+ |+.++-+..+|.++++......  .....|.++...+++...+. .. +.+..+|..+.+.
T Consensus       405 ~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~  481 (781)
T 3v9f_A          405 LSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKV  481 (781)
T ss_dssp             CCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSC
T ss_pred             CCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeE
Confidence            346788998887777555 6666678899988776433221  13467888888888865544 44 5688888766543


Q ss_pred             eeEEeec---ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecC---CCccEEEEEEeCCCCEEEEccCCC
Q psy15417         97 LAMYSHD---NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAG---HDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        97 ~~~~~~~---~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      .......   .....+.++...+++.+.++...+| +..+|....+.......   ....|.++...++|...+ |+.+|
T Consensus       482 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-~T~~G  559 (781)
T 3v9f_A          482 IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWL-ATGEG  559 (781)
T ss_dssp             CEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEE-EETTE
T ss_pred             EecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEE-EECCC
Confidence            2221111   0013577888888888766554355 66788654433221111   234688888877776543 33355


Q ss_pred             cEEEe
Q psy15417        171 FLRIW  175 (176)
Q Consensus       171 ~v~vw  175 (176)
                      -+..|
T Consensus       560 lv~~~  564 (781)
T 3v9f_A          560 LVCFP  564 (781)
T ss_dssp             EEEES
T ss_pred             ceEEE
Confidence            43444

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.85  E-value=0.04  Score=42.42  Aligned_cols=111  Identities=19%  Similarity=0.212  Sum_probs=75.6

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe------------eeeEecC------CCCCeeEEEEccC---CcEEEEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGS------------CKQTFPG------HESDINAVTFFPN---GWAFATG   80 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~------------~~~~~~~------h~~~v~~v~~~~~---~~~l~s~   80 (176)
                      .|..+..+|+|.+|+..+ +.+|.+-.+..+.            ..++++-      ...+|..+-|||-   +..|++-
T Consensus        67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL  145 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL  145 (452)
T ss_dssp             TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred             ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence            466788999999998886 5578888876321            0112321      3577999999995   4589999


Q ss_pred             eCCCcEEEeeCCCCC--ee------eEEeecceEeceEEEEECCCCcEEEEE--cCCCeEEEE
Q psy15417         81 SDDATCRLFDIRADQ--EL------AMYSHDNIICGITSVAFSRSGRLLLAG--YDDFNCNVW  133 (176)
Q Consensus        81 s~d~~i~iwd~~~~~--~~------~~~~~~~~~~~v~~~~~~~~~~~l~~g--~~d~~i~v~  133 (176)
                      -.|+.|++||+....  +.      ..++.......+.+++|.+++-.|.+.  ..+|-|+-.
T Consensus       146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence            999999999986422  11      112222223567899999988766664  477777543

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.77  E-value=0.089  Score=39.42  Aligned_cols=123  Identities=10%  Similarity=0.167  Sum_probs=77.4

Q ss_pred             cCeEEEEE--cCC-CC-EEEEEeCCCeEEEEEcC-------CCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         21 GDVMSLSL--APD-MR-TFVSGACDASAKLWDIR-------DGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        21 ~~V~~~~~--~~~-~~-~l~s~s~dg~v~~wd~~-------~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      ..++.+++  +|. +. +++....+|.+..|++.       +.+.+++|... +.+..+...+....|+.+-++..|..+
T Consensus       128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~  206 (355)
T 3amr_A          128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIWKF  206 (355)
T ss_dssp             SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred             CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEEecccceEEEE
Confidence            44556666  664 43 67788888999998882       34567777753 568889999888889999998776666


Q ss_pred             eCCC-----CCeeeEEeecceEeceEEEEE--CCCCc-EE-EEEcCCCeEEEEeCC-Cceeeeee
Q psy15417         90 DIRA-----DQELAMYSHDNIICGITSVAF--SRSGR-LL-LAGYDDFNCNVWDSM-KTERAGIL  144 (176)
Q Consensus        90 d~~~-----~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l-~~g~~d~~i~v~d~~-~~~~~~~~  144 (176)
                      +.+.     ...+...........+--+++  .++++ ++ ++.-.+.+..+||.. ..+.+..+
T Consensus       207 da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f  271 (355)
T 3amr_A          207 SAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF  271 (355)
T ss_dssp             ECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             eCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence            6442     223333322222112333444  55555 44 555567799999975 45555554

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.77  E-value=0.096  Score=38.51  Aligned_cols=150  Identities=11%  Similarity=0.041  Sum_probs=84.0

Q ss_pred             eEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEe-eCCCcEEEeeCCCCCeeeE
Q psy15417         23 VMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATG-SDDATCRLFDIRADQELAM   99 (176)
Q Consensus        23 V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~-s~d~~i~iwd~~~~~~~~~   99 (176)
                      ...+++.+. +.++.+-...+.|.+++++.......+...-...+++++.|. +..+++- +..+.|...++........
T Consensus        81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~  160 (318)
T 3sov_A           81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII  160 (318)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred             ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence            446788764 445555556678999998654333233333456789999986 4444443 2246787777754332222


Q ss_pred             EeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        100 YSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      .. .. ....+.++++|++ .++++=...+.|..+|...........+....-..+++..+ ..+.+-...+.|..+
T Consensus       161 ~~-~~-l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~~  234 (318)
T 3sov_A          161 IN-SE-IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILAC  234 (318)
T ss_dssp             EC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEEE
T ss_pred             EE-CC-CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEEE
Confidence            11 11 1234679999854 55566566788999987543222222222334456666543 344454455555543

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.72  E-value=0.19  Score=41.33  Aligned_cols=143  Identities=9%  Similarity=0.058  Sum_probs=85.1

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe---cCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF---PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~---~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      ...|.++...+++.+. .|+.++-+..||..+++.....   ......|.++...+++...+ |..++.+..+|.++++.
T Consensus       362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~  439 (781)
T 3v9f_A          362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF  439 (781)
T ss_dssp             SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred             CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence            3568999888877654 5555556888998765432211   12335688888887776544 66666788888765432


Q ss_pred             eeEEeec-ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC-----CccEEEEEEeCCCCEEEEccC
Q psy15417         97 LAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH-----DNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        97 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~tg~~  168 (176)
                       ..+... .....|.++...+++.+.+.. . +-+..+|..+++........     ...|.++...++|... .|+.
T Consensus       440 -~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~  513 (781)
T 3v9f_A          440 -QIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTF  513 (781)
T ss_dssp             -EECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEES
T ss_pred             -EEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEc
Confidence             222211 112357778888787766554 4 45788886654432221111     3568888888777654 3443

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=96.55  E-value=0.14  Score=37.48  Aligned_cols=151  Identities=14%  Similarity=0.003  Sum_probs=85.2

Q ss_pred             CeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCC-CcEEEeeCCCCCeee
Q psy15417         22 DVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDD-ATCRLFDIRADQELA   98 (176)
Q Consensus        22 ~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d-~~i~iwd~~~~~~~~   98 (176)
                      ....+++++.+. ++++-..++.|.+.+.+.......+...-...+++++.|.+. .+++-... +.|...++..... .
T Consensus        78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~  156 (316)
T 1ijq_A           78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-Y  156 (316)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-E
T ss_pred             CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-E
Confidence            346788886544 445556678899999875433333333335678999998644 44444332 6787777753322 2


Q ss_pred             EEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         99 MYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ...... ....+.++++|++ .++++-...+.|..+|...........  ........+++.. +..+++-...+.|..+
T Consensus       157 ~~~~~~-~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~  234 (316)
T 1ijq_A          157 SLVTEN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSA  234 (316)
T ss_dssp             EEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred             EEEECC-CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEE
Confidence            221111 1235678999865 455555566789999975432211111  1223345667753 4455555555666554

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.46  E-value=0.19  Score=38.14  Aligned_cols=152  Identities=13%  Similarity=0.034  Sum_probs=86.9

Q ss_pred             cCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC-cEEEEeeC-CCcEEEeeCCCCCee
Q psy15417         21 GDVMSLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSD-DATCRLFDIRADQEL   97 (176)
Q Consensus        21 ~~V~~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~s~-d~~i~iwd~~~~~~~   97 (176)
                      .....+++.+ .+.++.+-...+.|.+.+++.......+...-...+++++.|.+ .++++-.. .+.|...++......
T Consensus       159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~  238 (400)
T 3p5b_L          159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  238 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred             CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence            3456788887 44455555567889999987654444444334557899999864 44444322 367888887644332


Q ss_pred             eEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         98 AMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      .... .. ....+.+++++++. ++++=.....|..+|+..........  .....-..+++.. +..+++-...+.|..
T Consensus       239 ~~~~-~~-l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~~~V~~  315 (400)
T 3p5b_L          239 SLVT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS  315 (400)
T ss_dssp             EEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-TEEEEEESSSCSEEE
T ss_pred             EEEE-CC-CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-CEEEEecCCCCeEEE
Confidence            2221 11 12346789997655 44555566789999965433222222  1223345666643 344445555555654


Q ss_pred             e
Q psy15417        175 W  175 (176)
Q Consensus       175 w  175 (176)
                      +
T Consensus       316 ~  316 (400)
T 3p5b_L          316 A  316 (400)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.42  E-value=0.032  Score=45.71  Aligned_cols=150  Identities=15%  Similarity=0.049  Sum_probs=80.6

Q ss_pred             eEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCC-CcEEEeeCCCCCeeeE
Q psy15417         23 VMSLSLAPDM-RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDD-ATCRLFDIRADQELAM   99 (176)
Q Consensus        23 V~~~~~~~~~-~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d-~~i~iwd~~~~~~~~~   99 (176)
                      ...+++.+.+ .++++-...+.|.++++........+...-...+.+++.|.+. ++++-... +.|...++........
T Consensus       455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l  534 (699)
T 1n7d_A          455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL  534 (699)
T ss_dssp             CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred             cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence            3457777544 4445545567899999875543333332234567899998644 44443222 6777777653322211


Q ss_pred             EeecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        100 YSHDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       100 ~~~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      .. .. ....+.++++|+ +.++++=...+.|.+++...........  ........+++..+ .++++-...+.|..+
T Consensus       535 ~~-~~-l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~  610 (699)
T 1n7d_A          535 VT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSA  610 (699)
T ss_dssp             SC-SS-CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEE
T ss_pred             Ee-CC-CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEE
Confidence            11 11 112346889986 4566666677889999975432222211  11122234555544 344555555666654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.37  E-value=0.26  Score=38.69  Aligned_cols=112  Identities=12%  Similarity=0.159  Sum_probs=68.0

Q ss_pred             cCeEEEEE-------cCCCCEEEEEeCCC-------eEEEEEcCC-Ceee-----eEecCCCCCeeEEEEcc-CCcEEEE
Q psy15417         21 GDVMSLSL-------APDMRTFVSGACDA-------SAKLWDIRD-GSCK-----QTFPGHESDINAVTFFP-NGWAFAT   79 (176)
Q Consensus        21 ~~V~~~~~-------~~~~~~l~s~s~dg-------~v~~wd~~~-~~~~-----~~~~~h~~~v~~v~~~~-~~~~l~s   79 (176)
                      .....++|       ++++..|+.+...+       .|.+++... ++..     ..+... ....+++++| ++.++++
T Consensus       186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt  264 (496)
T 3kya_A          186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN  264 (496)
T ss_dssp             SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred             CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence            34788999       99998666665553       255665443 2221     122211 2346788999 4666777


Q ss_pred             eeCCCcEEEeeCC-------CCCe-----------e-eEEeecceEeceEEEEECCCCcE-EEEEcCCCeEEEEe
Q psy15417         80 GSDDATCRLFDIR-------ADQE-----------L-AMYSHDNIICGITSVAFSRSGRL-LLAGYDDFNCNVWD  134 (176)
Q Consensus        80 ~s~d~~i~iwd~~-------~~~~-----------~-~~~~~~~~~~~v~~~~~~~~~~~-l~~g~~d~~i~v~d  134 (176)
                      -...+.|..+|+.       ++..           . ..+..... .....++|+|++.. +++=..+..|+.++
T Consensus       265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~-~~p~~ia~~p~G~~lYvaD~~~h~I~kid  338 (496)
T 3kya_A          265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADP-SWEFQIFIHPTGKYAYFGVINNHYFMRSD  338 (496)
T ss_dssp             ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSS-SCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             ECCCCEEEEEecccccccccCceeecccccccccccceeEecCCC-CCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence            7777889999986       3332           1 11211111 12357999999984 55656778888855

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.31  E-value=0.32  Score=39.20  Aligned_cols=153  Identities=7%  Similarity=-0.008  Sum_probs=86.1

Q ss_pred             cCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCee-eeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         21 GDVMSLSLAPDMRTFVSG-ACDASAKLWDIRDGSC-KQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~-s~dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      .....++|++.+..++-+ ...+.|..++++.... ...+...-....++++.+. ++.+++-...+.|.+.++......
T Consensus        40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~  119 (619)
T 3s94_A           40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK  119 (619)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence            456789999866655544 4467788888865432 2233332356889999985 556666667788999998654432


Q ss_pred             eEEeecceEeceEEEEECCC-CcEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCE-EEEccCCCcEEE
Q psy15417         98 AMYSHDNIICGITSVAFSRS-GRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMA-VATGSWDSFLRI  174 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~-~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~tg~~d~~v~v  174 (176)
                      .... .. ......++++|. +.++.+-. ..+.|...++............-..-..+++.+++.. +++=+..+.|..
T Consensus       120 ~l~~-~~-l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~  197 (619)
T 3s94_A          120 VLFW-QE-LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK  197 (619)
T ss_dssp             EEEC-SS-CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             EEEe-CC-CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence            2221 11 122446889886 44555532 2456766665432222222223345678899876444 344444555655


Q ss_pred             e
Q psy15417        175 W  175 (176)
Q Consensus       175 w  175 (176)
                      +
T Consensus       198 ~  198 (619)
T 3s94_A          198 S  198 (619)
T ss_dssp             E
T ss_pred             e
Confidence            4

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.28  E-value=0.23  Score=37.24  Aligned_cols=150  Identities=10%  Similarity=0.169  Sum_probs=82.5

Q ss_pred             EEEEEcCCCCEEEEE------------eCCCeEEEEEcCCC--ee-eeEecC-----CCCCeeEEEEcc--CCc-EEEEe
Q psy15417         24 MSLSLAPDMRTFVSG------------ACDASAKLWDIRDG--SC-KQTFPG-----HESDINAVTFFP--NGW-AFATG   80 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~------------s~dg~v~~wd~~~~--~~-~~~~~~-----h~~~v~~v~~~~--~~~-~l~s~   80 (176)
                      ..+.+.|+|..++++            ..+|.|.++|.++.  +. .-.+.+     ..-..-.+.+.+  ++. .|+.+
T Consensus        53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv  132 (355)
T 3sre_A           53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV  132 (355)
T ss_dssp             CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred             ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence            456677877666665            26899999998742  21 112222     123566777766  343 34444


Q ss_pred             -eC--CCcEEEeeCCCCCe-eeEE-eec-ceEeceEEEEECCCCcEEEEEc-----------------CCCeEEEEeCCC
Q psy15417         81 -SD--DATCRLFDIRADQE-LAMY-SHD-NIICGITSVAFSRSGRLLLAGY-----------------DDFNCNVWDSMK  137 (176)
Q Consensus        81 -s~--d~~i~iwd~~~~~~-~~~~-~~~-~~~~~v~~~~~~~~~~~l~~g~-----------------~d~~i~v~d~~~  137 (176)
                       ..  +.++.+|++..+.. .... ... ......+.+.+.++|.++++..                 ..+.+.-+|.  
T Consensus       133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--  210 (355)
T 3sre_A          133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--  210 (355)
T ss_dssp             ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--
T ss_pred             ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--
Confidence             32  35677877654322 1111 111 1224578899999999877753                 1244555553  


Q ss_pred             ceeeeeecCCCccEEEEEEeCCCCEEE-EccCCCcEEEeC
Q psy15417        138 TERAGILAGHDNRVSCLGVTEDGMAVA-TGSWDSFLRIWN  176 (176)
Q Consensus       138 ~~~~~~~~~~~~~i~~~~~~~~~~~l~-tg~~d~~v~vwd  176 (176)
                      ++.. .....-..-+.++|+|+++.+. +-+..+.|..|+
T Consensus       211 ~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~  249 (355)
T 3sre_A          211 NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYE  249 (355)
T ss_dssp             TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred             CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEE
Confidence            2221 1211223457899999987654 444566776663

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.27  E-value=0.27  Score=37.91  Aligned_cols=142  Identities=14%  Similarity=0.132  Sum_probs=87.4

Q ss_pred             cCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC----CCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe--------
Q psy15417         29 APDMRTFVSGACDASAKLWDIRDGSCKQTFPGH----ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE--------   96 (176)
Q Consensus        29 ~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~--------   96 (176)
                      ..++..++.+- ++.||.-++.....-+.++-.    -..+..+..+|+|.+|+..+. ..|.+-.+..+..        
T Consensus        29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~  106 (452)
T 3pbp_A           29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ  106 (452)
T ss_dssp             ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred             EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence            34555555544 466776676633222223222    235778999999998888865 5788877763221        


Q ss_pred             ----eeEEeecc----eEeceEEEEECCCC---cEEEEEcCCCeEEEEeCCCc--eeeeee---------cCCCccEEEE
Q psy15417         97 ----LAMYSHDN----IICGITSVAFSRSG---RLLLAGYDDFNCNVWDSMKT--ERAGIL---------AGHDNRVSCL  154 (176)
Q Consensus        97 ----~~~~~~~~----~~~~v~~~~~~~~~---~~l~~g~~d~~i~v~d~~~~--~~~~~~---------~~~~~~i~~~  154 (176)
                          ...+....    ...+|..+.|||-+   ..|++=..|++||+||+.+.  ++. .+         ......+.++
T Consensus       107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~  185 (452)
T 3pbp_A          107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL  185 (452)
T ss_dssp             HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred             cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence                11222221    12468899999964   57888889999999998752  122 11         1222567889


Q ss_pred             EEeCCCCEEEE--ccCCCcEE
Q psy15417        155 GVTEDGMAVAT--GSWDSFLR  173 (176)
Q Consensus       155 ~~~~~~~~l~t--g~~d~~v~  173 (176)
                      +|..++..|..  .+..|-|+
T Consensus       186 ~Fg~~~lTLYvl~~t~~GDIY  206 (452)
T 3pbp_A          186 EFSKDGLTLYCLNTTEGGDIF  206 (452)
T ss_dssp             EECTTSSCEEEEECTTSCEEE
T ss_pred             EEcCCCcEEEEEecCCCCCEE
Confidence            99988765544  55667664

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.27  E-value=0.087  Score=36.95  Aligned_cols=103  Identities=10%  Similarity=0.022  Sum_probs=59.8

Q ss_pred             CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceE-----eceEEEEECCCCcEEEEEcCCCeEEEEeCCCc
Q psy15417         64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII-----CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT  138 (176)
Q Consensus        64 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~  138 (176)
                      .+..++|+|++.+.+.  .++.+.--+..+.+...-+.....+     .....+-|+|++.+.++  .|+.|+-++-.+.
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            6789999999986666  5566555554332211100111000     01246889999998888  5688887774321


Q ss_pred             eee-----eeecCC--CccEEEEEEeCCCCEEEEccCCCcE
Q psy15417        139 ERA-----GILAGH--DNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus       139 ~~~-----~~~~~~--~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ...     ....+.  -..+..+.|.|+|...+..  |+.+
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l  156 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF  156 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred             CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence            110     111111  1357889999999887666  6554

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.20  E-value=0.37  Score=38.85  Aligned_cols=151  Identities=5%  Similarity=-0.000  Sum_probs=86.5

Q ss_pred             cCeEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEcc-CCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         21 GDVMSLSLAPDMRT-FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP-NGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        21 ~~V~~~~~~~~~~~-l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      ..+.+++|++.+.. +.+-...+.|.-++++.......+...-..+.++++.+ .++.+++-+..+.|.+.++.......
T Consensus       349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~  428 (619)
T 3s94_A          349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI  428 (619)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence            34678999885544 44444577888888875433333333335678899986 46666766667889998886543322


Q ss_pred             EEeecceEeceEEEEECCC-CcEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEE
Q psy15417         99 MYSHDNIICGITSVAFSRS-GRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLR  173 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~-~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~  173 (176)
                      ... .. ......++++|. |.++.+-. ....|...++............-.+-..+++.++...| ++=+..+.|.
T Consensus       429 l~~-~~-l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~  504 (619)
T 3s94_A          429 LIS-ED-LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIE  504 (619)
T ss_dssp             EEC-TT-CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred             EEE-CC-CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEE
Confidence            221 11 124567999986 66666543 23567666644322222222233456778888754443 3333334443

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.13  E-value=0.23  Score=35.71  Aligned_cols=133  Identities=14%  Similarity=0.224  Sum_probs=65.3

Q ss_pred             CCCEEEEEeCCC-----eEEEEEcCCCeeee--EecCCCCCeeEEEEccCCcEEEEeeCC-------CcEEEeeCCCCCe
Q psy15417         31 DMRTFVSGACDA-----SAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDD-------ATCRLFDIRADQE   96 (176)
Q Consensus        31 ~~~~l~s~s~dg-----~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~   96 (176)
                      ++++++.|+.++     .+..||..+.+-..  .++........+.  -+++.++.|+.+       ..+..||+.++. 
T Consensus       108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-  184 (302)
T 2xn4_A          108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNE-  184 (302)
T ss_dssp             TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTE-
T ss_pred             CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCc-
Confidence            567777777553     46788887764222  2221111112222  256677777643       347788876542 


Q ss_pred             eeEEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceee--eeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         97 LAMYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERA--GILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        97 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      ..... ..........+.+  ++.+++.|+.+     ..+.+||..+.+-.  ..++....... ++.. ++..++.|+.
T Consensus       185 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~-~~~~-~~~i~v~GG~  260 (302)
T 2xn4_A          185 WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAG-VCAV-NGLLYVVGGD  260 (302)
T ss_dssp             EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE-EEEE-TTEEEEECCB
T ss_pred             EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCe-EEEE-CCEEEEECCc
Confidence            22211 1111111222333  56777777654     36888997765322  22221111112 2222 5566777776


Q ss_pred             CC
Q psy15417        169 DS  170 (176)
Q Consensus       169 d~  170 (176)
                      ++
T Consensus       261 ~~  262 (302)
T 2xn4_A          261 DG  262 (302)
T ss_dssp             CS
T ss_pred             CC
Confidence            54

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.08  E-value=0.24  Score=35.53  Aligned_cols=133  Identities=14%  Similarity=0.169  Sum_probs=67.2

Q ss_pred             CCCEEEEEeCC-----CeEEEEEcCCCee--eeEecCCCCCeeEEEEccCCcEEEEeeCC-----CcEEEeeCCCCCeee
Q psy15417         31 DMRTFVSGACD-----ASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRADQELA   98 (176)
Q Consensus        31 ~~~~l~s~s~d-----g~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~   98 (176)
                      ++++++.|+.+     ..+.+||..+.+-  +..++.....-..+.  -+++.++.|+.+     ..+..+|+.+.. ..
T Consensus       112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~  188 (301)
T 2vpj_A          112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGH-WT  188 (301)
T ss_dssp             TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTE-EE
T ss_pred             CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCc-EE
Confidence            56777777654     3578899887652  222222111112222  267777777754     357788876542 22


Q ss_pred             EEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceee--eeecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         99 MYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERA--GILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        99 ~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      ... ..........+.+  ++.+++.|+.+     ..+.+||..+.+-.  ..++.......+ +.. ++..++.|+.++
T Consensus       189 ~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~-~~~-~~~i~v~GG~~~  264 (301)
T 2vpj_A          189 NVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGA-TVL-RGRLYAIAGYDG  264 (301)
T ss_dssp             EECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEE-TTEEEEECCBCS
T ss_pred             eCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeE-EEE-CCEEEEEcCcCC
Confidence            221 1111111222333  56777777654     45889997765432  222211112222 222 556667777653

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.07  E-value=0.44  Score=38.52  Aligned_cols=152  Identities=5%  Similarity=-0.037  Sum_probs=89.1

Q ss_pred             cCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         21 GDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      ..+..++|++....+ .+-..++.|..++++.......+...-....++++.+. ++.+++-...+.|.+.++.......
T Consensus        37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~  116 (628)
T 4a0p_A           37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV  116 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred             CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence            456789999865554 45556788888888754433333322245788999875 5556666666789988886543322


Q ss_pred             EEeecceEeceEEEEECCC-CcEEEEEc-CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEEe
Q psy15417         99 MYSHDNIICGITSVAFSRS-GRLLLAGY-DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIW  175 (176)
Q Consensus        99 ~~~~~~~~~~v~~~~~~~~-~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vw  175 (176)
                      ... ... .....++++|. +.++.+-. ..+.|...++......... ........+++.+++..| ++=...+.|..+
T Consensus       117 l~~-~~l-~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~  193 (628)
T 4a0p_A          117 LVW-KDL-DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESS  193 (628)
T ss_dssp             EEC-SSC-CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEe-CCC-CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence            221 111 23467899985 55555532 2567777775443332222 233456788888865443 343444455443

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=95.87  E-value=0.081  Score=39.45  Aligned_cols=112  Identities=7%  Similarity=0.027  Sum_probs=70.2

Q ss_pred             CEEEEEeCCCeEEEEEcCCCeeeeEecCC-CCCeeEEEEc--c-CCcEEEEe-eCCCcEEEeeCCCCCeeeEEeecceEe
Q psy15417         33 RTFVSGACDASAKLWDIRDGSCKQTFPGH-ESDINAVTFF--P-NGWAFATG-SDDATCRLFDIRADQELAMYSHDNIIC  107 (176)
Q Consensus        33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~--~-~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~~~~~~  107 (176)
                      .+++.++.||.+.-+|.++|+.+++++.. ..++....-.  + ++..++.. ..||.+..++..++.....+...... 
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv-   89 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV-   89 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH-
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce-
Confidence            46889999999999999999999998754 1233221100  1 22333333 58999999998766333222221111 


Q ss_pred             ceEEEEEC-----------CCCcEEEEEcCCCeEEEEeCCCceeeeeec
Q psy15417        108 GITSVAFS-----------RSGRLLLAGYDDFNCNVWDSMKTERAGILA  145 (176)
Q Consensus       108 ~v~~~~~~-----------~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~  145 (176)
                      ....+...           ..+..+++|+.++++...|+.+++.+..+.
T Consensus        90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~  138 (339)
T 2be1_A           90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG  138 (339)
T ss_dssp             TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred             eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence            00001110           134677899999999999999999888775

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=95.86  E-value=0.31  Score=35.05  Aligned_cols=132  Identities=14%  Similarity=0.222  Sum_probs=65.4

Q ss_pred             CCCEEEEEeCC------CeEEEEEcCCCeeee--EecCCCCCeeEEEEccCCcEEEEeeC---------CCcEEEeeCCC
Q psy15417         31 DMRTFVSGACD------ASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSD---------DATCRLFDIRA   93 (176)
Q Consensus        31 ~~~~l~s~s~d------g~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~---------d~~i~iwd~~~   93 (176)
                      ++++++.|+.+      ..+.+||..+.+-..  .++.....-..+.  -+++.++.|+.         -..+.+||+.+
T Consensus       101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~  178 (306)
T 3ii7_A          101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT  178 (306)
T ss_dssp             TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred             CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence            56777777765      457889988775222  2221111112222  36667777764         23477888865


Q ss_pred             CCeeeEEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEE
Q psy15417         94 DQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus        94 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                      .+ ..... .......-..+.+  ++.+++.|+.+     ..+.+||..+.+-  +..++.......++ .. ++..++.
T Consensus       179 ~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~-~~~i~v~  253 (306)
T 3ii7_A          179 ET-WTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCA-AV-GSIVYVL  253 (306)
T ss_dssp             TE-EEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEE-EE-TTEEEEE
T ss_pred             Ce-EEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEE-EE-CCEEEEE
Confidence            42 22221 1111111222333  56777777643     3578899776532  22222211222222 22 5566677


Q ss_pred             ccCC
Q psy15417        166 GSWD  169 (176)
Q Consensus       166 g~~d  169 (176)
                      |+.+
T Consensus       254 GG~~  257 (306)
T 3ii7_A          254 AGFQ  257 (306)
T ss_dssp             ECBC
T ss_pred             eCcC
Confidence            7754

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.85  E-value=0.65  Score=38.65  Aligned_cols=150  Identities=15%  Similarity=0.079  Sum_probs=83.7

Q ss_pred             cCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeC-CCcEEEeeCCCCCee
Q psy15417         21 GDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSD-DATCRLFDIRADQEL   97 (176)
Q Consensus        21 ~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~-d~~i~iwd~~~~~~~   97 (176)
                      .....|++.+.+. ++++-...+.|.+.+++.......+...-....+|++.|. +.++++-.. .+.|...++......
T Consensus       471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~  550 (791)
T 3m0c_C          471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  550 (791)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred             CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence            3455788887664 4555556788999998754433333333456889999997 444444322 267888887644332


Q ss_pred             eEEeecceEeceEEEEECCCC-cEEEEEcCCCeEEEEeCCCceeeeeecC--CCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         98 AMYSHDNIICGITSVAFSRSG-RLLLAGYDDFNCNVWDSMKTERAGILAG--HDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~-~~l~~g~~d~~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      .... .. ....+.+++++.. .++++=.....|...++...........  ....-..|++..+ .++++-...+.|.
T Consensus       551 ~lv~-~~-l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~  626 (791)
T 3m0c_C          551 SLVT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIF  626 (791)
T ss_dssp             EEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEE
T ss_pred             EEEe-CC-CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEE
Confidence            2222 11 1235678888654 4555545667899998654333222222  1223345666443 3334444444444

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=95.54  E-value=0.42  Score=34.22  Aligned_cols=133  Identities=17%  Similarity=0.174  Sum_probs=65.6

Q ss_pred             CCCEEEEEeCC-----CeEEEEEcCCCe---e--eeEecCCCCCeeEEEEccCCcEEEEeeCCC-----cEEEeeCCCCC
Q psy15417         31 DMRTFVSGACD-----ASAKLWDIRDGS---C--KQTFPGHESDINAVTFFPNGWAFATGSDDA-----TCRLFDIRADQ   95 (176)
Q Consensus        31 ~~~~l~s~s~d-----g~v~~wd~~~~~---~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~~   95 (176)
                      ++.+++.|+.+     ..+.+||..+.+   -  +..++.....-..+.  -+++.++.|+.++     .+.++|+.+.+
T Consensus        62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~  139 (301)
T 2vpj_A           62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQ  139 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence            56777777755     358889987764   2  222221111122222  2677777776543     47778876543


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      =............-..+.+  ++.+++.|+.+     ..+.+||..+.+-..  .++.......+ +.. ++..++.|+.
T Consensus       140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~-~~~i~v~GG~  215 (301)
T 2vpj_A          140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGV-ALL-NDHIYVVGGF  215 (301)
T ss_dssp             EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEE-TTEEEEECCB
T ss_pred             EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceE-EEE-CCEEEEEeCC
Confidence            1111111111111222333  66777777654     357888976653322  22211112222 222 4566677766


Q ss_pred             C
Q psy15417        169 D  169 (176)
Q Consensus       169 d  169 (176)
                      +
T Consensus       216 ~  216 (301)
T 2vpj_A          216 D  216 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=95.47  E-value=0.45  Score=34.18  Aligned_cols=133  Identities=14%  Similarity=0.217  Sum_probs=66.3

Q ss_pred             CCCEEEEEeCC----CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC------CcEEEeeCCCCCeee
Q psy15417         31 DMRTFVSGACD----ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD------ATCRLFDIRADQELA   98 (176)
Q Consensus        31 ~~~~l~s~s~d----g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~~~~~~~~   98 (176)
                      ++.+++.|+.+    ..+..||..+.+-.  ..++.....-..+  .-+++.++.|+.+      ..+.+||+.+.+ ..
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~  131 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC--AAEGKIYTSGGSEVGNSALYLFECYDTRTES-WH  131 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE--EETTEEEEECCBBTTBSCCCCEEEEETTTTE-EE
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE--EECCEEEEECCCCCCCcEeeeEEEEeCCCCc-eE
Confidence            56677777754    56788998887522  2222111111222  2267777777765      357788876543 22


Q ss_pred             EEe-ecceEeceEEEEECCCCcEEEEEcC---------CCeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEc
Q psy15417         99 MYS-HDNIICGITSVAFSRSGRLLLAGYD---------DFNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        99 ~~~-~~~~~~~v~~~~~~~~~~~l~~g~~---------d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      ... .......-..+.+  ++.+++.|+.         -..+.+||..+.+-..  .++....... ++.. ++..++.|
T Consensus       132 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~i~v~G  207 (306)
T 3ii7_A          132 TKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHG-LVFV-KDKIFAVG  207 (306)
T ss_dssp             EECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCE-EEEE-TTEEEEEC
T ss_pred             eCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcce-EEEE-CCEEEEEe
Confidence            221 1111111122222  6677777653         3447889977653222  2221111112 2222 45666777


Q ss_pred             cCCC
Q psy15417        167 SWDS  170 (176)
Q Consensus       167 ~~d~  170 (176)
                      +.++
T Consensus       208 G~~~  211 (306)
T 3ii7_A          208 GQNG  211 (306)
T ss_dssp             CEET
T ss_pred             CCCC
Confidence            6543

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=95.45  E-value=0.48  Score=34.28  Aligned_cols=132  Identities=12%  Similarity=0.113  Sum_probs=64.0

Q ss_pred             CCCEEEEEeCC--------CeEEEEEcCCCee--eeEecCCCCCeeEEEEccCCcEEEEeeC-C-----CcEEEeeCCCC
Q psy15417         31 DMRTFVSGACD--------ASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGSD-D-----ATCRLFDIRAD   94 (176)
Q Consensus        31 ~~~~l~s~s~d--------g~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d-----~~i~iwd~~~~   94 (176)
                      ++.+++.|+.+        ..+.+||..+.+=  +..++..  .-...+..-+++.++.|+. +     ..+.++|+.+.
T Consensus        98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~  175 (315)
T 4asc_A           98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV--VYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKF  175 (315)
T ss_dssp             TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred             CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc--ccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence            56667777642        4578899887642  2222211  1111222246677777776 2     35788887654


Q ss_pred             CeeeEEe-ecceEeceEEEEECCCCcEEEEEcCCC-----eEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         95 QELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDF-----NCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        95 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~-----~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      . ..... .......-..+.+  ++.+++.|+.++     .+.+||..+.+-  +..++....... ++.. ++..++.|
T Consensus       176 ~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~l~v~G  250 (315)
T 4asc_A          176 E-WKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLS-LVSL-VGTLYAIG  250 (315)
T ss_dssp             E-EEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCE-EEEE-TTEEEEEE
T ss_pred             e-EEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccccee-EEEE-CCEEEEEC
Confidence            2 22211 1111111122333  567777776544     477888766532  222221111222 2222 45666677


Q ss_pred             cCC
Q psy15417        167 SWD  169 (176)
Q Consensus       167 ~~d  169 (176)
                      +.+
T Consensus       251 G~~  253 (315)
T 4asc_A          251 GFA  253 (315)
T ss_dssp             EEE
T ss_pred             Ccc
Confidence            653

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=95.17  E-value=0.57  Score=33.56  Aligned_cols=133  Identities=16%  Similarity=0.257  Sum_probs=65.2

Q ss_pred             CCCEEEEEeCC-----CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCCC-----cEEEeeCCCCCeee
Q psy15417         31 DMRTFVSGACD-----ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDDA-----TCRLFDIRADQELA   98 (176)
Q Consensus        31 ~~~~l~s~s~d-----g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d~-----~i~iwd~~~~~~~~   98 (176)
                      ++.+++.|+.+     ..+..||..+.+-.  ..++.....-..+.  -+++.++.|+.++     .+.+||+.+.+ ..
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~  137 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNE-WF  137 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTE-EE
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCe-Ee
Confidence            56777777754     35788998876522  22221111122222  2667777777653     46677876542 22


Q ss_pred             EEe-ecceEeceEEEEECCCCcEEEEEcCC-------CeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         99 MYS-HDNIICGITSVAFSRSGRLLLAGYDD-------FNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        99 ~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-------~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      ... ..........+.+  ++.+++.|+.+       ..+.+||..+.+-  +..++....... ++.. ++..++.|+.
T Consensus       138 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~iyv~GG~  213 (302)
T 2xn4_A          138 HVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAG-VGVL-NNLLYAVGGH  213 (302)
T ss_dssp             EECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCE-EEEE-TTEEEEECCB
T ss_pred             ecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccccccc-EEEE-CCEEEEECCC
Confidence            211 1111111222222  56777776542       3478899766532  222222111222 2222 4566677766


Q ss_pred             CC
Q psy15417        169 DS  170 (176)
Q Consensus       169 d~  170 (176)
                      ++
T Consensus       214 ~~  215 (302)
T 2xn4_A          214 DG  215 (302)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=95.17  E-value=0.59  Score=33.71  Aligned_cols=133  Identities=14%  Similarity=0.199  Sum_probs=66.1

Q ss_pred             CCCEEEEEeCC-----CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC-----CcEEEeeCCCCCeee
Q psy15417         31 DMRTFVSGACD-----ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRADQELA   98 (176)
Q Consensus        31 ~~~~l~s~s~d-----g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~   98 (176)
                      ++++++.|+.+     ..+..||..+.+-.  ..++.....-..+.+  +++.++.|+.+     ..+..+|+.+.+ ..
T Consensus       121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~  197 (308)
T 1zgk_A          121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE-WR  197 (308)
T ss_dssp             TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE-EE
T ss_pred             CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe-Ee
Confidence            56677776643     35788998876422  122211111222222  67777777664     357788876542 22


Q ss_pred             EEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEccCCC
Q psy15417         99 MYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATGSWDS  170 (176)
Q Consensus        99 ~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg~~d~  170 (176)
                      ... .......-..+.+  ++.+++.|+.+     ..+.+||..+.+-..  .++...... +++.. ++..++.|+.++
T Consensus       198 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~i~v~GG~~~  273 (308)
T 1zgk_A          198 MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL-GITVH-QGRIYVLGGYDG  273 (308)
T ss_dssp             ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCBCS
T ss_pred             eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce-EEEEE-CCEEEEEcCcCC
Confidence            111 1111111223333  66777777654     458899977653322  222111122 22233 456777777543

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=94.79  E-value=0.76  Score=33.09  Aligned_cols=132  Identities=12%  Similarity=0.158  Sum_probs=64.2

Q ss_pred             CCCEEEEEeC----C-----CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC-----CcEEEeeCCCC
Q psy15417         31 DMRTFVSGAC----D-----ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD-----ATCRLFDIRAD   94 (176)
Q Consensus        31 ~~~~l~s~s~----d-----g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d-----~~i~iwd~~~~   94 (176)
                      ++.+++.|+.    +     ..+.+||..+.+-.  ..++.....-..+.+  +++.++.|+.+     ..+.+||+.+.
T Consensus        70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~  147 (308)
T 1zgk_A           70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD  147 (308)
T ss_dssp             TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred             CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence            5667777765    2     35788898876422  122211111222222  66777777644     35777887654


Q ss_pred             CeeeEEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEc
Q psy15417         95 QELAMYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        95 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      + ..... .......-..+.+  ++.+++.|+.+     ..+.+||..+.+-..  .++.......+ +.. ++..++.|
T Consensus       148 ~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~-~~~-~~~iyv~G  222 (308)
T 1zgk_A          148 E-WHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGV-CVL-HNCIYAAG  222 (308)
T ss_dssp             E-EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEE-EEE-TTEEEEEC
T ss_pred             e-EeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceE-EEE-CCEEEEEe
Confidence            2 21111 1111111222333  56777777654     357888876553222  22211112222 222 55666777


Q ss_pred             cCC
Q psy15417        167 SWD  169 (176)
Q Consensus       167 ~~d  169 (176)
                      +.+
T Consensus       223 G~~  225 (308)
T 1zgk_A          223 GYD  225 (308)
T ss_dssp             CBC
T ss_pred             CCC
Confidence            654

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=94.53  E-value=0.46  Score=38.03  Aligned_cols=101  Identities=14%  Similarity=0.103  Sum_probs=63.1

Q ss_pred             eeEEEEccCCcEEEEee-CCCcEEEeeCCCC------Ce-----eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEE
Q psy15417         65 INAVTFFPNGWAFATGS-DDATCRLFDIRAD------QE-----LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV  132 (176)
Q Consensus        65 v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~------~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v  132 (176)
                      .-++.++|+|++++.++ .+.++.++|.+.-      ..     ...-+.+ .-.+..-.+|.++|..+.+-.-|.++..
T Consensus       325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk  403 (638)
T 3sbq_A          325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK  403 (638)
T ss_dssp             CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred             CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence            44688999998876655 4788999997631      11     1111111 1123445789999977778889999999


Q ss_pred             EeCCCc----------eeeeeecCCCccEEEEE-----EeCCCCEEEEc
Q psy15417        133 WDSMKT----------ERAGILAGHDNRVSCLG-----VTEDGMAVATG  166 (176)
Q Consensus       133 ~d~~~~----------~~~~~~~~~~~~i~~~~-----~~~~~~~l~tg  166 (176)
                      |++...          ..+..+.-|++.-...+     -.++|++|++.
T Consensus       404 Wni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l  452 (638)
T 3sbq_A          404 WNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL  452 (638)
T ss_dssp             EEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred             EeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence            997643          34445555655432111     14678888765

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=94.50  E-value=0.98  Score=33.04  Aligned_cols=141  Identities=13%  Similarity=0.069  Sum_probs=73.7

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe---eee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS---CKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~---~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ...+.++.|.+++..+++| .+|.|. .-.+.++   .+. ........+.++.|.+ +..++ ++.++.+.. ....++
T Consensus        35 ~~~~~~v~~~~~~~~~~~G-~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~  109 (327)
T 2xbg_A           35 TATILDMSFIDRHHGWLVG-VNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ  109 (327)
T ss_dssp             SSCEEEEEESSSSCEEEEE-TTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS
T ss_pred             CCcEEEEEECCCCcEEEEc-CCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC
Confidence            3578999998777777754 567552 2233332   111 1111245688999976 44444 455565443 222333


Q ss_pred             eeeEEeec-ceEeceEEEEECCCCcEEEEEcCCCeE-EEEeCC-CceeeeeecCCCccEEEEEEeCCCCEEEEccC
Q psy15417         96 ELAMYSHD-NIICGITSVAFSRSGRLLLAGYDDFNC-NVWDSM-KTERAGILAGHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus        96 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~g~~d~~i-~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      ........ .....+..+.+.+++..++++. ++.+ +-.|-- +.+..  .......+..+++.+++.+++.+..
T Consensus       110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~--~~~~~~~~~~~~~~~~~~~~~~g~~  182 (327)
T 2xbg_A          110 SWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQAL--VQEAIGVMRNLNRSPSGEYVAVSSR  182 (327)
T ss_dssp             SCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEE--ECSCCCCEEEEEECTTSCEEEEETT
T ss_pred             CceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEe--ecCCCcceEEEEEcCCCcEEEEECC
Confidence            33322211 0111245566666677666664 4544 333311 12222  2234456888899988888776643

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=94.38  E-value=0.99  Score=32.61  Aligned_cols=132  Identities=14%  Similarity=0.177  Sum_probs=62.7

Q ss_pred             CCCEEEEEeCC-------CeEEEEEcCCCeeee--EecCCCCCeeEEEEccCCcEEEEeeCC------CcEEEeeCCCCC
Q psy15417         31 DMRTFVSGACD-------ASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDD------ATCRLFDIRADQ   95 (176)
Q Consensus        31 ~~~~l~s~s~d-------g~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~~~~~   95 (176)
                      ++++++.|+.+       ..+.+||..+.+=..  .++...  -...+...+++.++.|+.+      ..+.++|+.+.+
T Consensus       109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  186 (318)
T 2woz_A          109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV--YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGD  186 (318)
T ss_dssp             TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE--ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred             CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc--cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence            56677777654       246788887764221  122111  1111222467777777642      357888886542


Q ss_pred             eeeEEe-ecceEeceEEEEECCCCcEEEEEcCC-----CeEEEEeCCCcee--eeeecCCCccEEEEEEeCCCCEEEEcc
Q psy15417         96 ELAMYS-HDNIICGITSVAFSRSGRLLLAGYDD-----FNCNVWDSMKTER--AGILAGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        96 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d-----~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                       ..... ..........+.+  ++.+++.|+.+     ..+.+||..+.+-  +..++....... ++.. ++..++.|+
T Consensus       187 -W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~i~v~GG  261 (318)
T 2woz_A          187 -WKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSIS-LVSL-AGSLYAIGG  261 (318)
T ss_dssp             -EEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCE-EEEE-TTEEEEECC
T ss_pred             -EEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceE-EEEE-CCEEEEECC
Confidence             22221 1111111122333  56777776543     2466888765432  222222212222 2222 456667776


Q ss_pred             CC
Q psy15417        168 WD  169 (176)
Q Consensus       168 ~d  169 (176)
                      .+
T Consensus       262 ~~  263 (318)
T 2woz_A          262 FA  263 (318)
T ss_dssp             BC
T ss_pred             ee
Confidence            54

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=94.34  E-value=1.1  Score=33.15  Aligned_cols=100  Identities=14%  Similarity=0.090  Sum_probs=57.4

Q ss_pred             CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec---ceEeceEEEEECCC----CcEEEEEcCC-----CeE
Q psy15417         63 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD---NIICGITSVAFSRS----GRLLLAGYDD-----FNC  130 (176)
Q Consensus        63 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~----~~~l~~g~~d-----~~i  130 (176)
                      ....+++|.|++..+++ ..++.|.+++  .++........   ........++++|+    +.++++-...     ..|
T Consensus        31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v  107 (352)
T 2ism_A           31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV  107 (352)
T ss_dssp             SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred             CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence            34678999999985555 5668999888  33211111110   11135678999998    4555544322     567


Q ss_pred             EEEeCCCc-----eee-eeec-----CCCccEEEEEEeCCCCEEEEcc
Q psy15417        131 NVWDSMKT-----ERA-GILA-----GHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus       131 ~v~d~~~~-----~~~-~~~~-----~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      ..++....     +.+ ..++     .|.  ...++|.|+|..+++-+
T Consensus       108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A          108 VRLRHLGERGVLDRVVLDGIPARPHGLHS--GGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EEEEECSSCEEEEEEEEEEECCCTTCCCC--CCCEEECTTSCEEEECC
T ss_pred             EEEEeCCCCcCceEEEEEeCCCCCCCCcC--CceEEECCCCCEEEEEC
Confidence            77775432     112 1233     122  24689999997776644

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=94.17  E-value=1.2  Score=34.66  Aligned_cols=106  Identities=10%  Similarity=0.042  Sum_probs=58.7

Q ss_pred             CeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCe---eeeEecC---------CCCCeeEEEEccC----CcEEEEeeCC-
Q psy15417         22 DVMSLSLAPDMR-TFVSGACDASAKLWDIRDGS---CKQTFPG---------HESDINAVTFFPN----GWAFATGSDD-   83 (176)
Q Consensus        22 ~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~---~~~~~~~---------h~~~v~~v~~~~~----~~~l~s~s~d-   83 (176)
                      .-+.|+|.|++. .++.+...|.|++++.....   .+..++.         ....+..++|+|+    +..+++-+.+ 
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~   94 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ   94 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence            346899999986 45566788999999754221   1122211         1356889999996    5555554321 


Q ss_pred             -----------CcEEEeeCCCC----------CeeeEEeecceEeceEEEEECCCCcEEEEEcCC
Q psy15417         84 -----------ATCRLFDIRAD----------QELAMYSHDNIICGITSVAFSRSGRLLLAGYDD  127 (176)
Q Consensus        84 -----------~~i~iwd~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d  127 (176)
                                 ..|.-|.+...          +.+.........-.-..+.|.||+.++++.+..
T Consensus        95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~  159 (463)
T 2wg3_C           95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG  159 (463)
T ss_dssp             CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred             CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence                       12333444321          111111111101124579999999877775543

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=93.36  E-value=2.2  Score=33.02  Aligned_cols=105  Identities=12%  Similarity=0.032  Sum_probs=57.4

Q ss_pred             CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc------eEeceEEEEECCC----CcEEEEEcC-------
Q psy15417         64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN------IICGITSVAFSRS----GRLLLAGYD-------  126 (176)
Q Consensus        64 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~~~----~~~l~~g~~-------  126 (176)
                      ...+++|.|+|..+++-...+.|.+++..++..........      ....+..++|+|+    +.++++-+.       
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~  107 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD  107 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence            46789999999877776544578887754433221111111      1245678999994    555554432       


Q ss_pred             -----CCeEEEEeCCC-------ceeee-eecC-CCccEEEEEEeCCCCEEEEccC
Q psy15417        127 -----DFNCNVWDSMK-------TERAG-ILAG-HDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus       127 -----d~~i~v~d~~~-------~~~~~-~~~~-~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                           ...|.-++...       .+.+. .+.. ..-....++|.|+|.++++.+.
T Consensus       108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                 12344444221       11121 1221 1123577999999987766443

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=92.88  E-value=1.9  Score=31.04  Aligned_cols=135  Identities=14%  Similarity=0.148  Sum_probs=63.9

Q ss_pred             cCCCCEEEEEeC-----C------CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC--------CcEE
Q psy15417         29 APDMRTFVSGAC-----D------ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD--------ATCR   87 (176)
Q Consensus        29 ~~~~~~l~s~s~-----d------g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d--------~~i~   87 (176)
                      ..++.+++.|+.     .      ..+..||..+.+-.  ..++.....-..+.+  +++.++.|+.+        ..+.
T Consensus        43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~  120 (315)
T 4asc_A           43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVM  120 (315)
T ss_dssp             CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEE
T ss_pred             EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEE
Confidence            357777777773     1      12667888876521  122211111112222  56677777742        3577


Q ss_pred             EeeCCCCCeeeEEe-ecceEeceEEEEECCCCcEEEEEcC-C-----CeEEEEeCCCcee--eeeecCCCccEEEEEEeC
Q psy15417         88 LFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYD-D-----FNCNVWDSMKTER--AGILAGHDNRVSCLGVTE  158 (176)
Q Consensus        88 iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~-d-----~~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~  158 (176)
                      ++|+.+.+ ..... .+.....-..+.  .++.+++.|+. +     ..+.+||..+.+-  +..++....... ++.. 
T Consensus       121 ~~d~~~~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-  195 (315)
T 4asc_A          121 CYDRLSFK-WGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFG-ATVH-  195 (315)
T ss_dssp             EEETTTTE-EEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCE-EEEE-
T ss_pred             EECCCCCc-EeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceE-EEEE-
Confidence            88876542 22211 111111112222  25677777765 2     3578888766432  222221111122 2222 


Q ss_pred             CCCEEEEccCCC
Q psy15417        159 DGMAVATGSWDS  170 (176)
Q Consensus       159 ~~~~l~tg~~d~  170 (176)
                      ++..++.|+.++
T Consensus       196 ~~~iyv~GG~~~  207 (315)
T 4asc_A          196 DGRIIVAAGVTD  207 (315)
T ss_dssp             TTEEEEEEEECS
T ss_pred             CCEEEEEeccCC
Confidence            456666776544

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=92.41  E-value=2.5  Score=31.35  Aligned_cols=101  Identities=12%  Similarity=0.022  Sum_probs=57.0

Q ss_pred             CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC-eeeEEee-cceEeceEEEEECCC----CcEEEEEcC---C----Ce
Q psy15417         63 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQ-ELAMYSH-DNIICGITSVAFSRS----GRLLLAGYD---D----FN  129 (176)
Q Consensus        63 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~-~~~~~~v~~~~~~~~----~~~l~~g~~---d----~~  129 (176)
                      ....+++|.|++..+++ ..++.|.+++. ++. .+..... .........++++|+    +.++++-..   +    ..
T Consensus        29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~  106 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR  106 (354)
T ss_dssp             SCEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred             CCCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence            34678999999985555 55689988873 333 1111110 011134678999997    555554332   2    45


Q ss_pred             EEEEeCCCc-------eee-eeec---CCCccEEEEEEeCCCCEEEEcc
Q psy15417        130 CNVWDSMKT-------ERA-GILA---GHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus       130 i~v~d~~~~-------~~~-~~~~---~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      |..++....       +.+ ..+.   .|.  ...++|.|+|.++++-+
T Consensus       107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~--~~~l~~~pDG~Lyvt~G  153 (354)
T 3a9g_A          107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHN--GGRIRFGPDGMLYITTG  153 (354)
T ss_dssp             EEEEEECSSSCCEEEEEEEEEEEECCSSCC--CCCEEECTTSCEEEECC
T ss_pred             EEEEEECCCCcCcCccEEEEEcCCCCCCcC--CceEEECCCCcEEEEEC
Confidence            666664432       111 1122   232  24588999998777654

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=92.31  E-value=3.8  Score=33.11  Aligned_cols=149  Identities=13%  Similarity=0.072  Sum_probs=83.7

Q ss_pred             cCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEe-cCCCCCeeEEEEcc-CCcEEEEeeCCC--cEEEeeCCCCC
Q psy15417         21 GDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTF-PGHESDINAVTFFP-NGWAFATGSDDA--TCRLFDIRADQ   95 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~~-~~~~l~s~s~d~--~i~iwd~~~~~   95 (176)
                      ..+..+++...++.| .+-+..+.|.+.+++ |+....+ ...-...++++++| .+..+++-....  .|...++....
T Consensus       389 ~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~  467 (628)
T 4a0p_A          389 IQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE  467 (628)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS
T ss_pred             CCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC
Confidence            357789998876644 566667889999886 4433333 33446689999999 576666643333  45555654332


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      ...... .. ....+.++++++...| .+=...+.|...++..................+++.. +..+.+=...+.|.
T Consensus       468 ~~~l~~-~~-l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~  543 (628)
T 4a0p_A          468 REVLFF-SG-LSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIE  543 (628)
T ss_dssp             CEEEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEET-TEEEEEETTTTEEE
T ss_pred             cEEEEe-cc-CCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEE
Confidence            222222 11 1234678888875544 4444567898898643322222212233445667655 33444443344443

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=91.79  E-value=3.1  Score=31.01  Aligned_cols=104  Identities=13%  Similarity=0.036  Sum_probs=59.6

Q ss_pred             CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec----ceEeceEEEEECCC----CcEEEEEc--CCCeEEE
Q psy15417         63 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD----NIICGITSVAFSRS----GRLLLAGY--DDFNCNV  132 (176)
Q Consensus        63 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~----~~~l~~g~--~d~~i~v  132 (176)
                      ....+++|.|++..+++--..|.|++++...+.........    ........++++|+    +.++++-+  .+..|.-
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R  111 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR  111 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence            45689999999987777755899998876544322111111    11235778999995    55544322  3334544


Q ss_pred             EeCCC----------ceeee-eec---CCCccEEEEEEeCCCCEEEEccC
Q psy15417        133 WDSMK----------TERAG-ILA---GHDNRVSCLGVTEDGMAVATGSW  168 (176)
Q Consensus       133 ~d~~~----------~~~~~-~~~---~~~~~i~~~~~~~~~~~l~tg~~  168 (176)
                      |....          .+.+. .++   .|..  ..++|.|+|.++++.++
T Consensus       112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g--~~l~fgpDG~Lyvt~Gd  159 (347)
T 3das_A          112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNG--GRIAFGPDKMLYAGTGE  159 (347)
T ss_dssp             EEBCTTSCTTCCBCCCEEEEEEECCCSSCCC--CCEEECTTSCEEEECBC
T ss_pred             EEeCCCCcccccCCCcEEEEEcCCCCCCccC--ccccCCCCCCEEEEECC
Confidence            54332          11111 222   2332  45889999987776543

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=91.12  E-value=5.4  Score=32.55  Aligned_cols=107  Identities=9%  Similarity=0.153  Sum_probs=57.5

Q ss_pred             CCCEEEEEeCCC------eEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCeeeEE
Q psy15417         31 DMRTFVSGACDA------SAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQELAMY  100 (176)
Q Consensus        31 ~~~~l~s~s~dg------~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~  100 (176)
                      ++++++.|+.++      .+.+||..+.+=.  ..++..... -+++...+++.++.|+.++  .+.+||+.+.. ....
T Consensus       451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~  528 (695)
T 2zwa_A          451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDV  528 (695)
T ss_dssp             TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEEC
T ss_pred             CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEc
Confidence            677777877543      4678888876421  112111111 1222324777888887755  68888886542 2222


Q ss_pred             ee----cceEeceEEEEECCC-CcEEEEEcC--C-----CeEEEEeCCCce
Q psy15417        101 SH----DNIICGITSVAFSRS-GRLLLAGYD--D-----FNCNVWDSMKTE  139 (176)
Q Consensus       101 ~~----~~~~~~v~~~~~~~~-~~~l~~g~~--d-----~~i~v~d~~~~~  139 (176)
                      ..    ......-..+.+..+ +.+++.|+.  +     ..+.+||..+..
T Consensus       529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~  579 (695)
T 2zwa_A          529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN  579 (695)
T ss_dssp             CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred             cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence            11    111111223445544 677777765  2     357888876654

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=90.34  E-value=2  Score=31.47  Aligned_cols=49  Identities=10%  Similarity=-0.031  Sum_probs=24.3

Q ss_pred             CeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEeeCC------CcEEEeeC
Q psy15417         42 ASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDD------ATCRLFDI   91 (176)
Q Consensus        42 g~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d------~~i~iwd~   91 (176)
                      ..+.+||..+.+  .+..++.....-.+++. -+++.++.|+.+      ..+..+|+
T Consensus       168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~  224 (357)
T 2uvk_A          168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF  224 (357)
T ss_dssp             CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred             ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence            468899998764  22223211111012222 256666666542      34566665

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=89.86  E-value=2.4  Score=31.43  Aligned_cols=101  Identities=13%  Similarity=0.059  Sum_probs=53.5

Q ss_pred             CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe-e----cceEeceEEEEECCC----CcEEEEEcC-------C
Q psy15417         64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-H----DNIICGITSVAFSRS----GRLLLAGYD-------D  127 (176)
Q Consensus        64 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~----~~~~~~v~~~~~~~~----~~~l~~g~~-------d  127 (176)
                      ....++|.|++..++.+...+.|++++.. +.....+. .    .........++++|+    +.++++-..       .
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            46789999999834444567899888743 21110000 0    011124678999995    555555332       2


Q ss_pred             CeEEEEeCCCc-------eee-eeec-----CCCccEEEEEEeCCCCEEEEcc
Q psy15417        128 FNCNVWDSMKT-------ERA-GILA-----GHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus       128 ~~i~v~d~~~~-------~~~-~~~~-----~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      ..|..++....       +.+ ..++     .|.  -..++|.|+|.++++-+
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~G  148 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIALG  148 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEEEC
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEEEC
Confidence            24555554321       111 1121     132  24589999996665543

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=88.48  E-value=5.4  Score=28.64  Aligned_cols=106  Identities=10%  Similarity=0.129  Sum_probs=52.8

Q ss_pred             cCCCCEEEEEeC----CC-------eEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC-------CcEEE
Q psy15417         29 APDMRTFVSGAC----DA-------SAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD-------ATCRL   88 (176)
Q Consensus        29 ~~~~~~l~s~s~----dg-------~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d-------~~i~i   88 (176)
                      ..++.+++.|+.    ++       .+..||..+.+-.  ..++.....-..+.+  +++.++.|+.+       ..+.+
T Consensus        54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~  131 (318)
T 2woz_A           54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC  131 (318)
T ss_dssp             CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred             EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence            456777888873    12       1677888776422  122211111122222  56777777754       24667


Q ss_pred             eeCCCCCeeeEEe-ecceEeceEEEEECCCCcEEEEEcC------CCeEEEEeCCCce
Q psy15417         89 FDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYD------DFNCNVWDSMKTE  139 (176)
Q Consensus        89 wd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~------d~~i~v~d~~~~~  139 (176)
                      +|+.+.+ ..... .+.....-..+.  .++.+++.|+.      -..+.+||..+.+
T Consensus       132 yd~~~~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  186 (318)
T 2woz_A          132 YDPVAAK-WSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD  186 (318)
T ss_dssp             EETTTTE-EEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred             EeCCCCC-EeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence            7776542 22211 111111122222  36677777753      2358889977653

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=87.27  E-value=11  Score=30.79  Aligned_cols=110  Identities=15%  Similarity=0.164  Sum_probs=60.1

Q ss_pred             CCCCEEEEEeCCC--eEEEEEcCCCeeee--E---ecCCCCCeeEEEEccC-CcEEEEeeCC-------CcEEEeeCCCC
Q psy15417         30 PDMRTFVSGACDA--SAKLWDIRDGSCKQ--T---FPGHESDINAVTFFPN-GWAFATGSDD-------ATCRLFDIRAD   94 (176)
Q Consensus        30 ~~~~~l~s~s~dg--~v~~wd~~~~~~~~--~---~~~h~~~v~~v~~~~~-~~~l~s~s~d-------~~i~iwd~~~~   94 (176)
                      .++++++.|+.++  .+.+||..+.+=..  .   ++.....-.++.+..+ ++.++.|+.+       ..+..||+.+.
T Consensus       499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~  578 (695)
T 2zwa_A          499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE  578 (695)
T ss_dssp             TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred             cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence            3788888888765  68899998764211  1   1111122233455544 6777777662       34778898766


Q ss_pred             Ce-----eeEEee-c-ceEeceEEEEECCCCcEEEEEcC--------CCeEEEEeCCCcee
Q psy15417         95 QE-----LAMYSH-D-NIICGITSVAFSRSGRLLLAGYD--------DFNCNVWDSMKTER  140 (176)
Q Consensus        95 ~~-----~~~~~~-~-~~~~~v~~~~~~~~~~~l~~g~~--------d~~i~v~d~~~~~~  140 (176)
                      .-     ...... . ........+.+ .++.+++.|+.        ...+.+||..+.+-
T Consensus       579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W  638 (695)
T 2zwa_A          579 NATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL  638 (695)
T ss_dssp             CSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred             ccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence            51     222111 1 11111223333 23677777763        34588999876543

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=85.91  E-value=8.2  Score=28.09  Aligned_cols=52  Identities=23%  Similarity=0.300  Sum_probs=28.3

Q ss_pred             CCCEEEEEeC-C---------CeEEEEEcCCCeee--eEecCCCCCeeEEEEccCCcEEEEeeCC
Q psy15417         31 DMRTFVSGAC-D---------ASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGWAFATGSDD   83 (176)
Q Consensus        31 ~~~~l~s~s~-d---------g~v~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~s~d   83 (176)
                      ++++++.|+. +         ..+..||..+.+=.  ..+. ........+...+++.++.|+.+
T Consensus        65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~  128 (357)
T 2uvk_A           65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTGGVN  128 (357)
T ss_dssp             TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEECCC
T ss_pred             CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-CcccccceEEEECCEEEEEeCcC
Confidence            5667777765 2         45788998876421  1222 11112222223567788888765

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=85.34  E-value=2.1  Score=36.38  Aligned_cols=37  Identities=19%  Similarity=0.343  Sum_probs=32.4

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF   58 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~   58 (176)
                      .+.++...++..++++-+.|+++|+|++.+++++.+.
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~  273 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI  273 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence            5677888888899999999999999999999887754

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=84.99  E-value=5.2  Score=32.14  Aligned_cols=58  Identities=16%  Similarity=0.244  Sum_probs=41.9

Q ss_pred             EEEEcCCCCEEEEEeCC------------CeEEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeC
Q psy15417         25 SLSLAPDMRTFVSGACD------------ASAKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSD   82 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~d------------g~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~   82 (176)
                      -|.|+|.|.+++.-..+            ..+.+.+..+++..+.+.++. ..++.++|+|+++.|+..-+
T Consensus       480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ  550 (592)
T 3zwu_A          480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ  550 (592)
T ss_dssp             EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred             ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence            48899999866654432            235666777788777776653 67999999999987776643

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=83.34  E-value=23  Score=31.01  Aligned_cols=126  Identities=11%  Similarity=0.039  Sum_probs=71.3

Q ss_pred             EEEEEcCCCeeeeEecCCC-CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCC-----
Q psy15417         44 AKLWDIRDGSCKQTFPGHE-SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRS-----  117 (176)
Q Consensus        44 v~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-----  117 (176)
                      |++.+......+..++... ..|...+...  .+++.++ .+.+.++++..++ +...........+.|+++.|.     
T Consensus       494 Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~-L~~~~~~~l~~evscl~i~~~~~~~~  569 (1158)
T 3ei3_A          494 VRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQE-LRQISHTEMEHEVACLDITPLGDSNG  569 (1158)
T ss_dssp             EEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTE-EEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred             EEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCc-eeeecccCCCCceEEEEeecCCCCcc
Confidence            5666665544555665432 3566666543  3455554 5677777776543 222222112236788888763     


Q ss_pred             -CcEEEEEcC-CCeEEEEeCCCceeeeeecCC-CccEEEEEEe--CCCCEEEEccCCCcEE
Q psy15417        118 -GRLLLAGYD-DFNCNVWDSMKTERAGILAGH-DNRVSCLGVT--EDGMAVATGSWDSFLR  173 (176)
Q Consensus       118 -~~~l~~g~~-d~~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~--~~~~~l~tg~~d~~v~  173 (176)
                       ..++++|.. |++++|+++...+.+....-. ......+.+.  ....+|..|-.||.+.
T Consensus       570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~  630 (1158)
T 3ei3_A          570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALF  630 (1158)
T ss_dssp             CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred             cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence             368888886 999999998765544432211 1122222221  3345777777777653

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=82.71  E-value=15  Score=28.62  Aligned_cols=150  Identities=5%  Similarity=0.017  Sum_probs=85.7

Q ss_pred             cCeEEEEEcCCCCEEEEEe-------CCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC--CcEEEE-eeC---CCcEE
Q psy15417         21 GDVMSLSLAPDMRTFVSGA-------CDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWAFAT-GSD---DATCR   87 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s-------~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s-~s~---d~~i~   87 (176)
                      ..|..-..+++.+.++..+       -.|.+++|..+.. ..+.+.||.+.-..+.+..+  ...+++ +..   .+.+.
T Consensus       151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh  229 (494)
T 1bpo_A          151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH  229 (494)
T ss_dssp             CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred             ceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence            4565666677777554222       2467789988754 35677788654444333321  122322 222   26788


Q ss_pred             EeeCCCC---C-ee----eEEeecce---EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417         88 LFDIRAD---Q-EL----AMYSHDNI---ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV  156 (176)
Q Consensus        88 iwd~~~~---~-~~----~~~~~~~~---~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~  156 (176)
                      +-++...   . ..    ....++..   .-+| ++.+++.-.+++.-+.-|.+++||++++.++...+-....|...+.
T Consensus       230 i~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPv-amqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~  308 (494)
T 1bpo_A          230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP  308 (494)
T ss_dssp             EEECSCCCTTCCCCCCEEEECCCCTTSTTCCEE-EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred             EEEcCCCccCCCCccceeeeeeCCcccccCcee-EEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecc
Confidence            8887543   1 00    00001100   0022 4566666666777778899999999999887776655666666555


Q ss_pred             eCCCCEEEEccCCCcE
Q psy15417        157 TEDGMAVATGSWDSFL  172 (176)
Q Consensus       157 ~~~~~~l~tg~~d~~v  172 (176)
                      .....-+......|.|
T Consensus       309 ~~~~~Gi~~Vnr~GqV  324 (494)
T 1bpo_A          309 HEATAGIIGVNRKGQV  324 (494)
T ss_dssp             ETTTTEEEEEETTCEE
T ss_pred             cCCCCcEEEEccCceE
Confidence            5554555555566655

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=82.36  E-value=2.5  Score=35.99  Aligned_cols=37  Identities=16%  Similarity=0.172  Sum_probs=30.1

Q ss_pred             CeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         64 DINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        64 ~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      .+.+++..++...+++.+.|+++|+|++.+++.+...
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~  273 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI  273 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence            3566777778889999999999999999988766543

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=81.02  E-value=8.9  Score=33.31  Aligned_cols=36  Identities=17%  Similarity=0.177  Sum_probs=28.6

Q ss_pred             eeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         65 INAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        65 v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      +.+++..++...+++-+.|+++|+|++.+++.+...
T Consensus       240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~  275 (1139)
T 4fhn_B          240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI  275 (1139)
T ss_dssp             BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred             eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence            344556677789999999999999999988766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	176
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-38
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-11
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	6e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-04
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-21
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-17
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-16
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-15
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-20
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-12
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-12
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-07
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-12
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	9e-11
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-08
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	7e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.002
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	4e-12
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	4e-10
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-09
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	4e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-11
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	7e-07
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	8e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.002
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-11
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-08
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.002
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	4e-11
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-08
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	3e-06
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	0.001
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	6e-10
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-05
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	0.001
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	7e-09
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	9e-08
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-05
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	8e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	8e-09
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	7e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	9e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	9e-08
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	4e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	5e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	9e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	7e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.002
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	8e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.002
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	3e-07
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	1e-04
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	3e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	4e-07
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	7e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	9e-05
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-06
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-05
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	6e-04
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	4e-05
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	5e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	6e-04
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	3e-04
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.004
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.004

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  132 bits (331), Expect = 2e-38
 Identities = 136/158 (86%), Positives = 149/158 (94%)

Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
           HTGDVMSLSLAPD R FVSGACDASAKLWD+R+G C+QTF GHESDINA+ FFPNG AFA
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242

Query: 79  TGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT 138
           TGSDDATCRLFD+RADQEL  YSHDNIICGITSV+FS+SGRLLLAGYDDFNCNVWD++K 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302

Query: 139 ERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +RAG+LAGHDNRVSCLGVT+DGMAVATGSWDSFL+IWN
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.8 bits (138), Expect = 4e-11
 Identities = 35/203 (17%), Positives = 70/203 (34%), Gaps = 43/203 (21%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
            GH   + ++    D R  VS + D    +WD    +     P   S +    + P+G  
Sbjct: 52  RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNY 111

Query: 77  FATGSDDATCRLFDIRADQELAMYSHD--------------------------------- 103
            A G  D  C +++++  +     S +                                 
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171

Query: 104 ----------NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSC 153
                          + S++ +   RL ++G  D +  +WD  +        GH++ ++ 
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231

Query: 154 LGVTEDGMAVATGSWDSFLRIWN 176
           +    +G A ATGS D+  R+++
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFD 254

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.9 bits (107), Expect = 6e-07
 Identities = 14/81 (17%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 54  CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA 113
            ++T  GH + I A+ +  +     + S D    ++D     ++      +    + + A
Sbjct: 47  TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRS--SWVMTCA 104

Query: 114 FSRSGRLLLAGYDDFNCNVWD 134
           ++ SG  +  G  D  C++++
Sbjct: 105 YAPSGNYVACGGLDNICSIYN 125

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.6 bits (83), Expect = 7e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWD 48
           +GH   V  L +  D     +G+ D+  K+W+
Sbjct: 309 AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 39/179 (21%), Positives = 65/179 (36%), Gaps = 24/179 (13%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTF------- 70
           GH   V  +    D     S + D + ++W +    CK     H   +  +++       
Sbjct: 141 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYS 200

Query: 71  -------------FPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSR 116
                           G    +GS D T +++D+     L     HDN    +  V F  
Sbjct: 201 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN---WVRGVLFHS 257

Query: 117 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW 175
            G+ +L+  DD    VWD         L  H++ V+ L   +    V TGS D  +++W
Sbjct: 258 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.9 bits (185), Expect = 2e-17
 Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 4/124 (3%)

Query: 12  GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF 71
            S ++        +          +SG+ D + K+WD+  G C  T  GH++ +  V F 
Sbjct: 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 256

Query: 72  PNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNC 130
             G    + +DD T R++D +  + +   + H++    +TS+ F ++   ++ G  D   
Sbjct: 257 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH---FVTSLDFHKTAPYVVTGSVDQTV 313

Query: 131 NVWD 134
            VW+
Sbjct: 314 KVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.5 bits (176), Expect = 3e-16
 Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 2/160 (1%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           SGH   V  +   P     VS + DA+ K+WD   G  ++T  GH   +  ++F  +G  
Sbjct: 14  SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 73

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
            A+ S D T +L+D +  + +      +      S     +G  +++   D    +W+  
Sbjct: 74  LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVS--IMPNGDHIVSASRDKTIKMWEVQ 131

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
                    GH   V  +   +DG  +A+ S D  +R+W 
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 171

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.0 bits (167), Expect = 5e-15
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 18/165 (10%)

Query: 30  PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
           P+    VS + D + K+W+++ G C +TF GH   +  V    +G   A+ S+D T R++
Sbjct: 111 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 170

Query: 90  DIRADQELA------------------MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN 131
            +   +  A                   YS  +   G  +    + G  LL+G  D    
Sbjct: 171 VVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 230

Query: 132 VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +WD         L GHDN V  +     G  + + + D  LR+W+
Sbjct: 231 MWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 275

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.4 bits (124), Expect = 4e-09
 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 45  KLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN 104
           K W  R    K    GH S +  V F P      + S+DAT +++D              
Sbjct: 1   KEWIPR-PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59

Query: 105 IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA 164
               +  ++F  SG+LL +   D    +WD    E    + GHD+ VS + +  +G  + 
Sbjct: 60  --DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIV 117

Query: 165 TGSWDSFLRIWN 176
           + S D  +++W 
Sbjct: 118 SASRDKTIKMWE 129

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.5 bits (207), Expect = 3e-20
 Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 23/170 (13%)

Query: 30  PDMRTFVSGACDASAKLWDIRDGSCKQT-------FPGHESDINAVTFFPNGWAFATGSD 82
            D +   +G+ D + ++WD   G   +          GH+  + +V F  +G +  +GS 
Sbjct: 215 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 274

Query: 83  DATCRLFDIRADQELAMY----------SHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
           D + +L++++     +            ++      + SVA +++   +L+G  D     
Sbjct: 275 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLF 334

Query: 133 WDSMKTERAGILAGHDNRVSCLGVTE------DGMAVATGSWDSFLRIWN 176
           WD        +L GH N V  + V        +    ATGS D   RIW 
Sbjct: 335 WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.9 bits (151), Expect = 1e-12
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 6/80 (7%)

Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAV------TFFP 72
           H   V+S++   +    +SG+ D     WD + G+      GH + + +V      +  P
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP 366

Query: 73  NGWAFATGSDDATCRLFDIR 92
               FATGS D   R++  +
Sbjct: 367 EYNVFATGSGDCKARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.0 bits (128), Expect = 1e-09
 Identities = 34/164 (20%), Positives = 62/164 (37%), Gaps = 17/164 (10%)

Query: 30  PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
           P     VSG+ D + ++WD+R G C  T    +          +G   A GS D   R++
Sbjct: 173 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW 232

Query: 90  DIRADQELAMYSHDNIIC-----GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL 144
           D      +     +N         + SV F+R G+ +++G  D +  +W+          
Sbjct: 233 DSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 292

Query: 145 AG------------HDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
                         H + V  +  T++   + +GS D  +  W+
Sbjct: 293 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD 336

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.9 bits (125), Expect = 3e-09
 Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF------------------P 59
            HT  V  +  + D     +G C+ + +++ + DGS                       P
Sbjct: 60  DHTSVVCCVKFSNDGEYLATG-CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118

Query: 60  GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR 119
             +  I +V F P+G   ATG++D   R++DI   + + +               S    
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178

Query: 120 LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             ++G  D    +WD    + +  L+  D   +      DG  +A GS D  +R+W+
Sbjct: 179 --VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWD 233

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.9 bits (94), Expect = 3e-05
 Identities = 36/163 (22%), Positives = 59/163 (36%), Gaps = 21/163 (12%)

Query: 34  TFVSGACDASAKLWDIRDGSCK----QTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
             +    +    L++                H S +  V F  +G   ATG +  T +++
Sbjct: 30  DALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNK-TTQVY 88

Query: 90  DIRADQELAMYSHDNIICG----------------ITSVAFSRSGRLLLAGYDDFNCNVW 133
            +     +A  S D+                    I SV FS  G+ L  G +D    +W
Sbjct: 89  RVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIW 148

Query: 134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           D    +   IL GH+  +  L     G  + +GS D  +RIW+
Sbjct: 149 DIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 191

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (150), Expect = 1e-12
 Identities = 36/156 (23%), Positives = 54/156 (34%), Gaps = 17/156 (10%)

Query: 30  PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF 89
            D +  VS + D + K+W+       +T  GH+  I             +GS D T RL+
Sbjct: 146 FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLW 203

Query: 90  DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD---------SMKTER 140
           DI     L +      +         R    +++G  D    VWD            T  
Sbjct: 204 DIECGACLRVLEGHEELVRCIRFDNKR----IVSGAYDGKIKVWDLVAALDPRAPAGTLC 259

Query: 141 AGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
              L  H  RV  L    D   + + S D  + IW+
Sbjct: 260 LRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (110), Expect = 2e-07
 Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 9/161 (5%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           S  +  V  L    D +  VSG  D + K+WD     CK+   GH   +  + +      
Sbjct: 12  SETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII 69

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD-S 135
             +          +        ++  + ++    +     +         D +  VWD +
Sbjct: 70  TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVT------CSKDRSIAVWDMA 123

Query: 136 MKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             T+         +R +   V  D   + + S D  +++WN
Sbjct: 124 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 164

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (104), Expect = 2e-06
 Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 11/130 (8%)

Query: 12  GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF 71
                + +        L    R  VSG+ D + +LWDI  G+C +   GHE  +      
Sbjct: 168 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIR 225

Query: 72  PNGWAFATGSDDATCRLFDIRADQELAMYSHDNIIC-------GITSVAFSRSGRLLLAG 124
            +     +G+ D   +++D+ A  +    +    +         +  + F      +++ 
Sbjct: 226 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSS 283

Query: 125 YDDFNCNVWD 134
             D    +WD
Sbjct: 284 SHDDTILIWD 293

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (146), Expect = 4e-12
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
           H   V+SL  A   + FVS   D     W    G+         S + +     +     
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIV 322

Query: 79  TGSDDATCRLFDI 91
           TGS D    ++++
Sbjct: 323 TGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (136), Expect = 9e-11
 Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 4/130 (3%)

Query: 47  WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII 106
                   +       S I ++ + P G   A G + +   +  +    +  ++ H++ +
Sbjct: 209 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCV 268

Query: 107 CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG 166
               S+ F+  G+  ++   D   N W       +   +   + V    ++ D   + TG
Sbjct: 269 L---SLKFAYCGKWFVSTGKDNLLNAWR-TPYGASIFQSKESSSVLSCDISVDDKYIVTG 324

Query: 167 SWDSFLRIWN 176
           S D    ++ 
Sbjct: 325 SGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (116), Expect = 4e-08
 Identities = 34/164 (20%), Positives = 64/164 (39%), Gaps = 6/164 (3%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-----FPGHESDINAVTFFP 72
            H   V +++++   R   +G      K+WDI     K           ++ I +    P
Sbjct: 49  NHGEVVCAVTISNPTRHVYTG-GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107

Query: 73  NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
           +G     G + +T  ++D+ A          +      ++A S   ++  +   D N  V
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167

Query: 133 WDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           WD           GH +  SC+ ++ DG  + TG  D+ +R W+
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD 211

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (106), Expect = 7e-07
 Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 5/104 (4%)

Query: 36  VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ 95
           V    DA       R      T   H   + AVT         TG      +++DI    
Sbjct: 26  VPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGGKG-CVKVWDISHPG 83

Query: 96  ELAMYSHDNIIC---GITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             +  S  + +     I S      G  L+ G +    ++WD  
Sbjct: 84  NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (80), Expect = 0.002
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDI 49
           S  +  V+S  ++ D +  V+G+ D  A ++++
Sbjct: 303 SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (146), Expect = 4e-12
 Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 12/157 (7%)

Query: 29  APDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL 88
             D    VSG+ D S ++WD+  G+C  T  GH+S  + +    N     +G+ D+T ++
Sbjct: 184 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKI 241

Query: 89  FDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD-----SMKTERAGI 143
           +DI+  Q L      N      +     +   ++   DD    +WD      ++      
Sbjct: 242 WDIKTGQCLQTLQGPNKHQSAVTC-LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 300

Query: 144 LAGHDNRVSCLGVTEDGMAVATGSWD----SFLRIWN 176
             G    V  +  +   +  A GS +    + L + +
Sbjct: 301 SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (131), Expect = 4e-10
 Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 9/160 (5%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
            GH   V++  L       VSG+ D + K+W    G C +T  GH   + +     N   
Sbjct: 13  KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII- 70

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
                   +        + E     H       T        + +++G  D    VWD  
Sbjct: 71  -----ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 125

Query: 137 KTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             +   +L GH   V C  V  DG  V +G++D  +++W+
Sbjct: 126 TGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWD 163

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (123), Expect = 5e-09
 Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 7/146 (4%)

Query: 32  MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDI 91
            R  VSGA D   K+WD    +C  T  GH + + ++ F  +G    +GS D + R++D+
Sbjct: 147 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 204

Query: 92  RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRV 151
                +   +         +        +L++G  D    +WD    +    L G +   
Sbjct: 205 ETGNCIHTLTG----HQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 260

Query: 152 SCLGVTE-DGMAVATGSWDSFLRIWN 176
           S +   + +   V T S D  +++W+
Sbjct: 261 SAVTCLQFNKNFVITSSDDGTVKLWD 286

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 4e-06
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 9/131 (6%)

Query: 47  WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA-MYSHDNI 105
           W   +    +   GH+  +        G    +GSDD T +++     + L  +  H   
Sbjct: 1   WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG- 58

Query: 106 ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVAT 165
             G+ S     +    +      +  +          I   + +  +   +      V +
Sbjct: 59  --GVWSSQMRDN----IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVS 112

Query: 166 GSWDSFLRIWN 176
           GS D+ LR+W+
Sbjct: 113 GSRDATLRVWD 123

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.1 bits (141), Expect = 2e-11
 Identities = 25/137 (18%), Positives = 52/137 (37%), Gaps = 2/137 (1%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
            GH   V++  L  +    ++GA D   +++D  +        GH+  + A+ +   G  
Sbjct: 9   RGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI- 66

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
             +GS D T R++DI+      ++   N       +   ++ + ++ G  D   +VW   
Sbjct: 67  LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP 126

Query: 137 KTERAGILAGHDNRVSC 153
           K           +    
Sbjct: 127 KESSVPDHGEEHDYPLV 143

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.7 bits (106), Expect = 7e-07
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 6/124 (4%)

Query: 55  KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVA 113
           + T  GH + +     F + +   TG+DD   R++D    + L   S HD    G+ ++ 
Sbjct: 5   RTTLRGHMTSVITCLQFEDNY-VITGADDKMIRVYDSINKKFLLQLSGHDG---GVWALK 60

Query: 114 FSRSGRLLLAG-YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL 172
           ++  G L+                             R   +   ++   + TGS D+ L
Sbjct: 61  YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120

Query: 173 RIWN 176
            +W 
Sbjct: 121 HVWK 124

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (98), Expect = 8e-06
 Identities = 9/71 (12%), Positives = 21/71 (29%), Gaps = 2/71 (2%)

Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC-KQTFPGHESDINAVTFFPNGWAF 77
           H  ++ +++        +    +    ++++R G             I +V F       
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LV 338

Query: 78  ATGSDDATCRL 88
           A    D    L
Sbjct: 339 AAVEKDGQSFL 349

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.6 bits (80), Expect = 0.002
 Identities = 11/130 (8%), Positives = 33/130 (25%), Gaps = 3/130 (2%)

Query: 47  WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII 106
             IR    +     +    +         +       A           + +     +  
Sbjct: 223 TTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHT 282

Query: 107 CGITSVAFSRSGRLLLAGYDDFNCNVWD-SMKTERAGILAGHDNRVSCLGVTEDGMAVAT 165
                  F  S  +L++G ++   N+++          +    +++  +      + VA 
Sbjct: 283 NLSAITTFYVSDNILVSGSEN-QFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL-VAA 340

Query: 166 GSWDSFLRIW 175
              D    + 
Sbjct: 341 VEKDGQSFLE 350

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.7 bits (140), Expect = 2e-11
 Identities = 19/166 (11%), Positives = 45/166 (27%), Gaps = 6/166 (3%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNG 74
           S     +   +   D         +    +++       Q      H   +  V + P+ 
Sbjct: 4   SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63

Query: 75  WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
               T   D    ++ ++            I      V ++ + +    G      ++  
Sbjct: 64  NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123

Query: 135 SMKTERAGILAGHDNR----VSCLGVTEDGMAVATGSWDSFLRIWN 176
             +     +           V  L    + + +A GS D   RI++
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 169

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.5 bits (116), Expect = 4e-08
 Identities = 31/164 (18%), Positives = 50/164 (30%), Gaps = 8/164 (4%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           S   G V  +  + +       + D++  L D        T       + AVTF      
Sbjct: 198 SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSL 257

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
            A G D          A  +L+     ++    +    +   R       D   +   S 
Sbjct: 258 VAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNL---DKKASSEGSA 314

Query: 137 KTERAGILAGHDNRVSCLGVTEDG----MAVATGSWDSFLRIWN 176
               AG+ + H N VS + V   G        T   D  + IW+
Sbjct: 315 AAG-AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.6 bits (80), Expect = 0.002
 Identities = 12/90 (13%), Positives = 25/90 (27%), Gaps = 5/90 (5%)

Query: 12  GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF 71
           G  +  G        S             D  A        +       H++ ++ ++  
Sbjct: 276 GKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG-SAAAGAGLDSLHKNSVSQISVL 334

Query: 72  PNG----WAFATGSDDATCRLFDIRADQEL 97
             G      F T   D    ++D+R+ +  
Sbjct: 335 SGGKAKCSQFCTTGMDGGMSIWDVRSLESA 364

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 58.3 bits (139), Expect = 4e-11
 Identities = 14/171 (8%), Positives = 35/171 (20%), Gaps = 16/171 (9%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK-------QTFPGHESDINAVTF 70
                  + +   D +     +  +     D    +            P      N    
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235

Query: 71  FPNGWAFATGSDDAT-----CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY 125
            P       G  D           ++       +   ++ I   +               
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 295

Query: 126 DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +      +D         +    N ++ L ++ D   V     D  +  + 
Sbjct: 296 EKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFP 342

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 51.0 bits (120), Expect = 1e-08
 Identities = 13/126 (10%), Positives = 31/126 (24%), Gaps = 13/126 (10%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLW-------DIRDGSCKQTFPGHESDINAVT 69
               G      L P   T  +G  D +           D  D              +   
Sbjct: 224 PLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPV 283

Query: 70  FFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFN 129
                  +    +      +D++  +   + ++      +T +  S   + ++   DD  
Sbjct: 284 HGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNN------LTDLRLSADRKTVMVRKDDGK 337

Query: 130 CNVWDS 135
              +  
Sbjct: 338 IYTFPL 343

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 43.7 bits (101), Expect = 3e-06
 Identities = 4/84 (4%), Positives = 17/84 (20%), Gaps = 4/84 (4%)

Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
                               +           +D++           ++++  +    + 
Sbjct: 271 PLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EVKNNLTDLRLSADR 326

Query: 75  WAFATGSDDATCRLFDIRADQELA 98
                  DD     F +   ++  
Sbjct: 327 KTVMVRKDDGKIYTFPLEKPEDER 350

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 36.4 bits (82), Expect = 0.001
 Identities = 6/47 (12%), Positives = 18/47 (38%)

Query: 11  LGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT 57
           + +   +    ++  L L+ D +T +    D     + +     ++T
Sbjct: 305 VKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERT 351

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 54.9 bits (130), Expect = 6e-10
 Identities = 12/124 (9%), Positives = 32/124 (25%), Gaps = 1/124 (0%)

Query: 13  SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFP 72
                   G  + L   P            S     +   +  + +  H          P
Sbjct: 10  PSLPRTARGTAVVLGNTPAGDKIQY-CNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSP 68

Query: 73  NGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNV 132
           +G+  A+G      R++D      +   +       +  +++    + + A  +      
Sbjct: 69  SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 128

Query: 133 WDSM 136
              +
Sbjct: 129 HVFL 132

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 47.6 bits (111), Expect = 1e-07
 Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT-FFPNGWAF 77
           H+G V  L+ +PD     S + D + K+W++     ++T P      +          A 
Sbjct: 237 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQAL 296

Query: 78  ATGSDDATCRLFDI 91
            + S +      + 
Sbjct: 297 VSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.0 bits (94), Expect = 2e-05
 Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 8/112 (7%)

Query: 30  PDMRTFVSGACDASAKLWDIRDGSCKQT-------FPGHESDINAVTFFPNGWAFATGSD 82
           PD   F S   D +  L++  DG+              H   +  +T+ P+G   A+ S 
Sbjct: 199 PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 258

Query: 83  DATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
           D T +++++   +          I     +    + + L++   +   N  +
Sbjct: 259 DKTIKIWNVATLKVEKTIPVGTRI-EDQQLGIIWTKQALVSISANGFINFVN 309

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.3 bits (87), Expect = 2e-04
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 6/136 (4%)

Query: 47  WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA-----MYS 101
           ++      K TF  H   +++V + P+G  FA+   D T  L++     +          
Sbjct: 174 FEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 233

Query: 102 HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD-SMKTERAGILAGHDNRVSCLGVTEDG 160
           +      +  + +S  G  + +   D    +W+ +       I  G       LG+    
Sbjct: 234 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK 293

Query: 161 MAVATGSWDSFLRIWN 176
            A+ + S + F+   N
Sbjct: 294 QALVSISANGFINFVN 309

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.4 bits (82), Expect = 0.001
 Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 1/67 (1%)

Query: 110 TSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD 169
             +  + +G  +       +             I   H ++ +    +  G   A+G   
Sbjct: 21  VVLGNTPAGDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH 79

Query: 170 SFLRIWN 176
             +RIW+
Sbjct: 80  GNVRIWD 86

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.8 bits (122), Expect = 7e-09
 Identities = 29/206 (14%), Positives = 56/206 (27%), Gaps = 47/206 (22%)

Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF------PGHESDINAV 68
           A   H  D+ S+S        VS + D   K+WD +    +           H+S ++ V
Sbjct: 9   AGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66

Query: 69  TFFPNGWA-------FATGSDDATCRLFDIRADQELAMYSHDNIIC--------GITSVA 113
                           AT S       + I  + E      + +             ++ 
Sbjct: 67  DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126

Query: 114 FSRSG-----RLLLAGYDDFNCNVWDSMKTER------------------AGILAGHDNR 150
           +  S        L+A        +W                                   
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186

Query: 151 VSCLGVTEDGMAVATGSWDSFLRIWN 176
            + + ++E G+ +ATG  +  ++I  
Sbjct: 187 ATSVDISERGL-IATGFNNGTVQISE 211

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.3 bits (113), Expect = 9e-08
 Identities = 24/106 (22%), Positives = 34/106 (32%), Gaps = 9/106 (8%)

Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDI----NAVTFFPNG 74
           H+  VMSLS      T  S   D   + WD++      T   H  DI    + +    +G
Sbjct: 288 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG 347

Query: 75  WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL 120
            + A         L          M +  N    +  V   RS R 
Sbjct: 348 DSLAEPGVFDVKFLKKG---WRSGMGADLNE--SLCCVCLDRSIRW 388

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.1 bits (97), Expect = 1e-05
 Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 5/111 (4%)

Query: 47  WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS--HDN 104
                         H S + +++F  +G    +   D   R +D++  + +   +   D+
Sbjct: 274 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDD 333

Query: 105 IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLG 155
           I      +A    G  L         +V    K  R+G+ A  +  + C+ 
Sbjct: 334 IEIEEDILAVDEHGDSLAEPGVF---DVKFLKKGWRSGMGADLNESLCCVC 381

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (83), Expect = 8e-04
 Identities = 10/135 (7%), Positives = 41/135 (30%), Gaps = 13/135 (9%)

Query: 53  SCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR-------ADQELAMYSHDNI 105
           +       H++DI +V+   +     + S D   +++D +        D+  + + H + 
Sbjct: 5   ATANAGKAHDADIFSVSACNSF--TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG 62

Query: 106 ICGITSV----AFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM 161
           +  +  +      +    L+       +   +   + +    +      +    + +   
Sbjct: 63  LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSF 122

Query: 162 AVATGSWDSFLRIWN 176
                   +   + +
Sbjct: 123 WALKWGASNDRLLSH 137

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 51.5 bits (121), Expect = 8e-09
 Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 1/122 (0%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-GHESDINAVTFFPNGWA 76
           GH   + +LS + D +T  S   +     WDI  G   + FP  H + I  +     G  
Sbjct: 10  GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 69

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSM 136
           F    DD    +    +  + +    + +      +A S  G + +A             
Sbjct: 70  FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 129

Query: 137 KT 138
            T
Sbjct: 130 LT 131

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 47.7 bits (111), Expect = 2e-07
 Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 1/86 (1%)

Query: 52  GSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITS 111
           GS  Q   GH   I A++   +G    +   +     +DI       ++   +    IT 
Sbjct: 2   GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVH-ATMITG 60

Query: 112 VAFSRSGRLLLAGYDDFNCNVWDSMK 137
           +  +  G L    +DD    V     
Sbjct: 61  IKTTSKGDLFTVSWDDHLKVVPAGGS 86

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.7 bits (98), Expect = 7e-06
 Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 2/64 (3%)

Query: 30  PDMRTFVSGACDASAKLWDIRDGSCKQ--TFPGHESDINAVTFFPNGWAFATGSDDATCR 87
           PD     +G+ D S  +W++   S         H         + N     +   D+  +
Sbjct: 234 PDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293

Query: 88  LFDI 91
            +++
Sbjct: 294 FWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.5 bits (82), Expect = 9e-04
 Identities = 6/34 (17%), Positives = 16/34 (47%)

Query: 143 ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +  GH+  ++ L  + DG  + +   +  +  W+
Sbjct: 7   VRYGHNKAITALSSSADGKTLFSADAEGHINSWD 40

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.3 bits (113), Expect = 9e-08
 Identities = 14/117 (11%), Positives = 39/117 (33%), Gaps = 7/117 (5%)

Query: 43  SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH 102
           S+K +  R              +N++ F P      T   D     ++++  +++  ++ 
Sbjct: 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291

Query: 103 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED 159
            N     + V  + S  +L     D       ++       +  + + +  +   E+
Sbjct: 292 FN---EDSVVKIACSDNILCLATSDDTFKTNAAIDQT----IELNASSIYIIFDYEN 341

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.4 bits (108), Expect = 4e-07
 Identities = 14/140 (10%), Positives = 29/140 (20%), Gaps = 3/140 (2%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTF---PGHESDINAVTFFPN 73
                 +  + + P     +  + D S  ++     +          ++  +    F  N
Sbjct: 8   QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN 67

Query: 74  GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW 133
                         L              +N                L+A   D    V 
Sbjct: 68  TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVI 127

Query: 134 DSMKTERAGILAGHDNRVSC 153
           D        I   + N  + 
Sbjct: 128 DPRNYGDGVIAVKNLNSNNT 147

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.0 bits (107), Expect = 5e-07
 Identities = 8/87 (9%), Positives = 23/87 (26%), Gaps = 7/87 (8%)

Query: 56  QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE----LAMYSHDNIICGITS 111
           Q     +  I+ +   P+       S D +  ++      +    L    + +    +  
Sbjct: 5   QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH---PLLC 61

Query: 112 VAFSRSGRLLLAGYDDFNCNVWDSMKT 138
             F  +  L +         +   +  
Sbjct: 62  CNFIDNTDLQIYVGTVQGEILKVDLIG 88

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.6 bits (106), Expect = 9e-07
 Identities = 11/95 (11%), Positives = 30/95 (31%), Gaps = 8/95 (8%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           +     V S+  +P  +   +   D     W+++     + F       + V    +   
Sbjct: 248 TNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKIACSDNI 306

Query: 77  FATGSDDATCRL-------FDIRADQELAMYSHDN 104
               + D T +         ++ A     ++ ++N
Sbjct: 307 LCLATSDDTFKTNAAIDQTIELNASSIYIIFDYEN 341

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.8 bits (91), Expect = 7e-05
 Identities = 14/153 (9%), Positives = 36/153 (23%), Gaps = 18/153 (11%)

Query: 41  DASAKLWDIRDGSCKQTF----PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE 96
           ++  + + +                    +          +A  S D    +       +
Sbjct: 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228

Query: 97  LA-------------MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGI 143
                               N+   + S+ FS   + L     D   + W+    ++   
Sbjct: 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288

Query: 144 LAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
            A   N  S + +      +   + D   +   
Sbjct: 289 FAKF-NEDSVVKIACSDNILCLATSDDTFKTNA 320

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.6 bits (80), Expect = 0.002
 Identities = 6/34 (17%), Positives = 13/34 (38%)

Query: 143 ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           I     + +S + +      +   SWD  L ++ 
Sbjct: 6   IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYK 39

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.6 bits (111), Expect = 1e-07
 Identities = 6/69 (8%), Positives = 25/69 (36%), Gaps = 2/69 (2%)

Query: 24  MSLSLAPDMRTFVSGACDASAKLWDIRD-GSCKQTFPGHESDINAVTFFPNGWAFATGSD 82
            +     +     +G+ D +  ++ ++      +    H+  +N + +        +   
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGA 277

Query: 83  DATCRLFDI 91
           DA  + +++
Sbjct: 278 DACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.2 bits (89), Expect = 1e-04
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 2/79 (2%)

Query: 99  MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD-SMKTERAGILAGHDNRVSCLGVT 157
           + +         +        L+  G  D N  ++      +    L  H + V+ L   
Sbjct: 208 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE 267

Query: 158 EDGMAVATGSWDSFLRIWN 176
                + +   D+ ++ WN
Sbjct: 268 TPST-LVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (83), Expect = 7e-04
 Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 6/90 (6%)

Query: 47  WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA--MYSHDN 104
                 S         ++  A          ATGS D    ++ ++   ++   + +H +
Sbjct: 200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD 259

Query: 105 IICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
              G+ ++ +     L+ +G D      W+
Sbjct: 260 ---GVNNLLWETPSTLVSSGADA-CIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (83), Expect = 8e-04
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 11/81 (13%)

Query: 56  QTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFS 115
           +T  GH   I A+T  P      +GS D     +   +  +     H N    I S+  S
Sbjct: 7   KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ----DHSN---LIVSLDNS 55

Query: 116 RSGRLLLAGYDDFNCNVWDSM 136
           ++       +DD       + 
Sbjct: 56  KAQEYSSISWDDTLKVNGITK 76

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.3 bits (79), Expect = 0.002
 Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 9/98 (9%)

Query: 17  SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA 76
           SGH   + +L++ P     +SG+ D     W             H + I ++        
Sbjct: 10  SGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQEY 60

Query: 77  FATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAF 114
            +   DD        + +             G T+V  
Sbjct: 61  SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLT 98

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 47.1 bits (111), Expect = 3e-07
 Identities = 15/134 (11%), Positives = 29/134 (21%), Gaps = 5/134 (3%)

Query: 35  FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94
            V+        L D      K       + ++      +G        D    + D+   
Sbjct: 35  SVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDLWMK 93

Query: 95  QELAMYSHD---NIICGITSVAFSRSGRLLLA-GYDDFNCNVWDSMKTERAGILAGHDNR 150
           +   +             TS       +  +A  Y      + D    E   I +     
Sbjct: 94  EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT 153

Query: 151 VSCLGVTEDGMAVA 164
                   +    A
Sbjct: 154 YDEQEYHPEPRVAA 167

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.0 bits (90), Expect = 1e-04
 Identities = 14/172 (8%), Positives = 35/172 (20%), Gaps = 17/172 (9%)

Query: 22  DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK-----QTFPGHESDINAVTFFPNG-W 75
            V    L+   R       D    + D+           +      S   +        +
Sbjct: 63  AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKY 122

Query: 76  AFATGSDDATCRLFDIRADQELAMYSHDNIICGI---------TSVAFSRSG-RLLLAGY 125
           A A         + D    +   + S   +              ++  S      ++   
Sbjct: 123 AIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 182

Query: 126 DDFNCNVWDSMKTERAGILA-GHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           +     + D              +  +   G+        T +      +  
Sbjct: 183 ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVI 234

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 18/125 (14%), Positives = 31/125 (24%), Gaps = 11/125 (8%)

Query: 59  PGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSG 118
           P          +        T  D     L D    +   +         +     S SG
Sbjct: 17  PEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY---AVHISRLSASG 73

Query: 119 RLLLAGYDDFNCNVWDSMKTERAGILA------GHDNRVSCLGVTEDG-MAVATGSWDSF 171
           R L     D   N+ D +  +    +A         +  +      +   A+A   W   
Sbjct: 74  RYLFVIGRDGKVNMID-LWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQ 132

Query: 172 LRIWN 176
             I +
Sbjct: 133 YVIMD 137

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.4 bits (108), Expect = 4e-07
 Identities = 11/65 (16%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 30  PDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVT---FFPNGWAFATGSDDATC 86
            D + F +   DA+ ++WD+    C Q +   +  +                + S D T 
Sbjct: 261 LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 320

Query: 87  RLFDI 91
             +++
Sbjct: 321 NFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.9 bits (91), Expect = 7e-05
 Identities = 21/132 (15%), Positives = 37/132 (28%), Gaps = 12/132 (9%)

Query: 14  PAASGHTGDVMSLSLAPDMRTFVSGACDASA-KLWDIRDGSCK--QTFPGHESD-INAVT 69
           P  S        LS  P           ++  +  D  D        F GH S  +  V 
Sbjct: 11  PQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVK 70

Query: 70  FFP--NGWAFATGSDDATCRLFDIRADQELAM------YSHDNIICGITSVAFSRSGRLL 121
           F P        +G +     ++    D+E              +   I+ +++   GR L
Sbjct: 71  FSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL 130

Query: 122 LAGYDDFNCNVW 133
               +  +    
Sbjct: 131 CVVGEGRDNFGV 142

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.5 bits (90), Expect = 9e-05
 Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 1/89 (1%)

Query: 47  WDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNII 106
                    +              + +   FAT   DAT R++D+   + +  ++ D   
Sbjct: 236 KSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ 295

Query: 107 CGITSVAFSRSG-RLLLAGYDDFNCNVWD 134
            G   V    +G   +++   D   N ++
Sbjct: 296 LGNQQVGVVATGNGRIISLSLDGTLNFYE 324

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 43.6 bits (101), Expect = 3e-06
 Identities = 15/127 (11%), Positives = 30/127 (23%), Gaps = 6/127 (4%)

Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT-FPGHESDINAVTFFPNGWAF 77
                   +   D+      A        D+  G          +    +    P     
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255

Query: 78  ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK 137
                      FD+  +  +      +      SV  S  G  +  G    +   +D+  
Sbjct: 256 FG--AYNVLESFDLEKNASIKRVPLPH---SYYSVNVSTDGSTVWLGGALGDLAAYDAET 310

Query: 138 TERAGIL 144
            E+ G +
Sbjct: 311 LEKKGQV 317

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 40.6 bits (93), Expect = 3e-05
 Identities = 18/159 (11%), Positives = 37/159 (23%), Gaps = 17/159 (10%)

Query: 35  FVSGACDASAKLWDIRDGSCKQTFPGHE--SDINAVTFFPNG-WAFATGSDDATCRLFDI 91
            ++ A      + D    +  +     +           P G  A+AT +   +    D+
Sbjct: 4   ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63

Query: 92  RADQELAMYSHDNIIC---GITSVAFSRSGRLLLAGYDD-----------FNCNVWDSMK 137
              + L              +   A S  G+ L                          +
Sbjct: 64  VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123

Query: 138 TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
           T           +++ L    DG  +     D  +    
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE 162

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.0 bits (89), Expect = 1e-04
 Identities = 16/162 (9%), Positives = 33/162 (20%), Gaps = 4/162 (2%)

Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
              G    VM       +      + +A             Q            T   + 
Sbjct: 150 YGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDI 209

Query: 75  WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWD 134
                 +        D+   +          +   ++       R             +D
Sbjct: 210 DPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA---FGAYNVLESFD 266

Query: 135 SMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             K      +    +    + V+ DG  V  G     L  ++
Sbjct: 267 LEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYD 307

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 42.0 bits (97), Expect = 1e-05
 Identities = 16/132 (12%), Positives = 37/132 (28%), Gaps = 8/132 (6%)

Query: 45  KLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN 104
             W  +    + +            F  +    AT          D++  +       D 
Sbjct: 196 YFWPHQSPRHEFSMLYTI-----ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADL 250

Query: 105 IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA 164
                T +   +    +    +      +D +K  +    A  D+   C+   + G  + 
Sbjct: 251 TELYFTGLRSPKDPNQIYGVLNR--LAKYD-LKQRKLIKAANLDHTYYCVAFDKKGDKLY 307

Query: 165 TGSWDSFLRIWN 176
            G   + L ++N
Sbjct: 308 LGGTFNDLAVFN 319

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 37.4 bits (85), Expect = 5e-04
 Identities = 9/80 (11%), Positives = 23/80 (28%), Gaps = 2/80 (2%)

Query: 19  HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA 78
            T    +   +P     + G  +     +D++     +     +     V F   G    
Sbjct: 250 LTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLY 307

Query: 79  TGSDDATCRLFDIRADQELA 98
            G       +F+    +++ 
Sbjct: 308 LGGTFNDLAVFNPDTLEKVK 327

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 37.0 bits (84), Expect = 6e-04
 Identities = 8/116 (6%), Positives = 22/116 (18%), Gaps = 8/116 (6%)

Query: 68  VTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL-AGYD 126
                        +      + D+ +D         +   G  +   +   R        
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF-GPGTAMMAPDNRTAYVLNNH 60

Query: 127 DFNCNVWDSMKTERAGIL------AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN 176
             +    D    +                 +    ++ DG  V      +     +
Sbjct: 61  YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 116

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.7 bits (94), Expect = 4e-05
 Identities = 18/146 (12%), Positives = 35/146 (23%), Gaps = 5/146 (3%)

Query: 35  FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD 94
            V+        L D       +      + ++      +G        DA   + D+ A 
Sbjct: 35  SVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAK 93

Query: 95  QELAMY---SHDNIICGITSVAFSRSGRLLLAG-YDDFNCNVWDSMKTERAGILAGHDNR 150
           +   +             +S       R  +AG Y      + D    E   I++     
Sbjct: 94  EPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT 153

Query: 151 VSCLGVTEDGMAVATGSWDSFLRIWN 176
           V       +    A  +         
Sbjct: 154 VDTQTYHPEPRVAAIIASHEHPEFIV 179

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.4 bits (90), Expect = 1e-04
 Identities = 15/186 (8%), Positives = 39/186 (20%), Gaps = 25/186 (13%)

Query: 12  GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF 71
                   T          D                       +   P  E  IN   + 
Sbjct: 148 PDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT----HTEVFHPEDEFLINHPAYS 203

Query: 72  PNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN 131
                    +        D+ +     + + + +     +  +   G   +A +   +  
Sbjct: 204 QKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 263

Query: 132 VWDSMKTERAGILAG-------------------HDNRVSCLGVTEDG--MAVATGSWDS 170
                + +                            + +  + V++D   +  A  + D 
Sbjct: 264 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 323

Query: 171 FLRIWN 176
            L I +
Sbjct: 324 TLYIHD 329

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.2 bits (87), Expect = 2e-04
 Identities = 16/189 (8%), Positives = 40/189 (21%), Gaps = 28/189 (14%)

Query: 12  GSPAASGHTGDVMSLSLAPDMRTF----------VSGACDASAKLWDIRDGSCKQTFPGH 61
           G        G + +  +A D                G      +++D             
Sbjct: 38  GRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELP 97

Query: 62  ESDINAVTFFPNGWAF---------ATGSDDATCRLFDIRADQELAMY-----SHDNIIC 107
           ++    V  +P   +             S      + D+       M       H     
Sbjct: 98  DAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTA 157

Query: 108 GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGS 167
             T     R G L    +           +          +  ++    ++    +   +
Sbjct: 158 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH----PEDEFLINHPAYSQKAGRLVWPT 213

Query: 168 WDSFLRIWN 176
           +   +   +
Sbjct: 214 YTGKIHQID 222

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.5 bits (85), Expect = 5e-04
 Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 3/86 (3%)

Query: 15  AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG 74
             + H        L      +          + D + G     F     +I+++    + 
Sbjct: 253 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDE 311

Query: 75  --WAFATGSDDATCRLFDIRADQELA 98
               +A  + D T  + D  + +EL 
Sbjct: 312 KPLLYALSTGDKTLYIHDAESGEELR 337

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.1 bits (84), Expect = 6e-04
 Identities = 18/164 (10%), Positives = 35/164 (21%), Gaps = 21/164 (12%)

Query: 18  GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFPGHESDINAVTFFPNGW 75
                +   + +      V           D+  G  K             A  + P GW
Sbjct: 192 EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 251

Query: 76  AFATGSDDATCRLFDIRADQELAMYSHDNIIC-----------------GITSVAFSRSG 118
                          +    E    +    +                   I S+  S+  
Sbjct: 252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDE 311

Query: 119 RLLL--AGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDG 160
           + LL      D    + D+   E    +    +    +   + G
Sbjct: 312 KPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 37.9 bits (86), Expect = 3e-04
 Identities = 8/74 (10%), Positives = 23/74 (31%), Gaps = 2/74 (2%)

Query: 35  FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG-WAFATGSDDATCRLFDIRA 93
           +++ +   +  + D+       T P   S+       P+G   +   +      + D   
Sbjct: 5   YIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTAT 63

Query: 94  DQELAMYSHDNIIC 107
           +  +A     +   
Sbjct: 64  NNVIATVPAGSSPQ 77

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 34.5 bits (77), Expect = 0.004
 Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 4/60 (6%)

Query: 76  AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLL-AGYDDFNCNVWD 134
           A+   S+     + D+ +++  A     +          S  G  +  A     + ++ D
Sbjct: 4   AYIANSESDNISVIDVTSNKVTATIPVGS---NPMGAVISPDGTKVYVANAHSNDVSIID 60

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 34.6 bits (78), Expect = 0.004
 Identities = 13/144 (9%), Positives = 29/144 (20%), Gaps = 24/144 (16%)

Query: 12  GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFF 71
           G+           +           + A             + K    G+ES   A  F 
Sbjct: 203 GAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFR 262

Query: 72  PNGWAFATGSDDA-------------------TCRLFDIRADQELAMYSHDNIICGITSV 112
             G+       +                              Q     S+ +      ++
Sbjct: 263 SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAI 319

Query: 113 AFSRSGRLLL--AGYDDFNCNVWD 134
             ++ G              +++D
Sbjct: 320 IAAQDGASDNYANSAGTEVLDIYD 343

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	176
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.97
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.97
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.97
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.97
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.97
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.97
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.97
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.97
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.97
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.96
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.95
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.95
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.94
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.94
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.94
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.94
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.94
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.94
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.94
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.93
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.93
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.92
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.92
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.92
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.91
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.88
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.88
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.87
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.83
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.77
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.76
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.74
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.74
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.74
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.73
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.67
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.64
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.62
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.6
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.58
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.49
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.47
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.31
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.29
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.28
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.24
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.22
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.02
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.0
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.97
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.96
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.9
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.85
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.82
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.78
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.74
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.7
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.65
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.51
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.25
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.24
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.14
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.06
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.01
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.83
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.68
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.5
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.5
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.46
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	96.84
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.7
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	96.19
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.16
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.14
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	95.81
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.71
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	95.52
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	95.5
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	95.47
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.21
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	94.97
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	94.74
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	94.58
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	94.56
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	94.22
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	93.95
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	93.54
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	92.99
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	92.46
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	91.94
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	88.6
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	87.71
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	87.52
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	84.69
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	84.6
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	80.09

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.2e-31  Score=195.09  Aligned_cols=160  Identities=86%  Similarity=1.454  Sum_probs=148.7

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      ..+...+....+.+...++++|+.|+.|++||++++++..++.+|..+|++++|+|++.+|++++.|+.+++|+++....
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~  260 (340)
T d1tbga_         181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE  260 (340)
T ss_dssp             ECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred             cccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccc
Confidence            34677888999999999999999999999999999999999999999999999999999999999999999999998777


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ...+.......++.++.|+|++.++++|+.|+.|++||+.+++++..+.+|...|.+++|+|++.+|++|+.|++|+|||
T Consensus       261 ~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         261 LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             ccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            66665555556789999999999999999999999999999999999999999999999999999999999999999998

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=6.8e-31  Score=197.16  Aligned_cols=158  Identities=11%  Similarity=0.115  Sum_probs=136.5

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCe--eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGS--CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      +.++|+|++|+|++.+|++|+.||.|++||.++++  ++..+++|.++|++++|+|++++|++++.|++|++||+.+...
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence            35789999999999999999999999999998775  6778899999999999999999999999999999999987654


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCce----eeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTE----RAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ........+...+.++.|+|+++.+++|+.|+++++|+.....    .......|...|.+++|+|++.+|++|+.|+++
T Consensus        86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v  165 (371)
T d1k8kc_          86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC  165 (371)
T ss_dssp             EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEE
Confidence            4444443344568999999999999999999999999865533    233455788899999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       166 ~v~~  169 (371)
T d1k8kc_         166 RIFS  169 (371)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9995

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=5e-30  Score=188.76  Aligned_cols=160  Identities=16%  Similarity=0.244  Sum_probs=140.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee--eeEecCCCCCeeEEEEccCCcEEEEeeCC--CcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGSDD--ATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d--~~i~iwd   90 (176)
                      .+.+|.+.|++++|+|++++|++|+.||+|++||+++++.  ...+++|..+|.+++|+|+++.+++++.+  ..+++|+
T Consensus        53 ~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~  132 (311)
T d1nr0a1          53 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL  132 (311)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred             EEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccc
Confidence            4679999999999999999999999999999999988753  45688999999999999999999999864  5699999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCCcE-EEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSGRL-LLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      +++.+....+  ..+...|.+++|+|++++ +++|+.|+.|++||+.+.+.......|...|.+++++|++.+|++|+.|
T Consensus       133 ~~~~~~~~~l--~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d  210 (311)
T d1nr0a1         133 FDTGTSNGNL--TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD  210 (311)
T ss_dssp             TTTCCBCBCC--CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccc--cccccccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccccccccc
Confidence            9876655433  223346889999999874 7889999999999999999999999999999999999999999999999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      +.|++||
T Consensus       211 ~~v~~~d  217 (311)
T d1nr0a1         211 GTIVLYN  217 (311)
T ss_dssp             SCEEEEE
T ss_pred             ccccccc
Confidence            9999996

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=2.7e-29  Score=183.85  Aligned_cols=162  Identities=22%  Similarity=0.401  Sum_probs=141.1

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||.+.|++++|+|++.+|+||+.||+|++||+.+++.+..+..|..+|.+++|+|++.++++++.|+.+++|+....
T Consensus        50 tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~  129 (340)
T d1tbga_          50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR  129 (340)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSS
T ss_pred             EECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccccccc
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999996543


Q ss_pred             Ceee----EEe-ec--------------------------------------ceEeceEEEEECCCCcEEEEEcCCCeEE
Q psy15417         95 QELA----MYS-HD--------------------------------------NIICGITSVAFSRSGRLLLAGYDDFNCN  131 (176)
Q Consensus        95 ~~~~----~~~-~~--------------------------------------~~~~~v~~~~~~~~~~~l~~g~~d~~i~  131 (176)
                      ....    ... +.                                      .....+....+.+...++++|..|+.++
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  209 (340)
T d1tbga_         130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK  209 (340)
T ss_dssp             CSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred             ccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEE
Confidence            2110    000 00                                      0001356677888899999999999999


Q ss_pred             EEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        132 VWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       132 v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +||+.++++...+.+|...|.+++|+|++.+|++|+.|+.|++||
T Consensus       210 i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~  254 (340)
T d1tbga_         210 LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD  254 (340)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Confidence            999999999999999999999999999999999999999999996

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=5.9e-30  Score=188.35  Aligned_cols=160  Identities=20%  Similarity=0.329  Sum_probs=139.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCC--CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACD--ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDI   91 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~d--g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~   91 (176)
                      .+.+|.++|.+++|+|+++++++++.+  +.+++|++++++...++.+|...|++++|+|++. .+++|+.|+.|++||+
T Consensus        97 ~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~  176 (311)
T d1nr0a1          97 TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG  176 (311)
T ss_dssp             EEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEET
T ss_pred             ccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeecccccccccccccc
Confidence            467899999999999999999999864  5599999999999999999999999999999987 5889999999999999


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee-------cCCCccEEEEEEeCCCCEEE
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-------AGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~  164 (176)
                      ++.+......  .+..+|.++.++|+++++++++.|+.+++||...++....+       .+|...|.+++|+|++.+|+
T Consensus       177 ~~~~~~~~~~--~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~  254 (311)
T d1nr0a1         177 PPFKFKSTFG--EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA  254 (311)
T ss_dssp             TTBEEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE
T ss_pred             cccccccccc--cccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEE
Confidence            8876554432  22346889999999999999999999999998877655543       36788999999999999999


Q ss_pred             EccCCCcEEEeC
Q psy15417        165 TGSWDSFLRIWN  176 (176)
Q Consensus       165 tg~~d~~v~vwd  176 (176)
                      +|+.|+.|+|||
T Consensus       255 tgs~Dg~v~iwd  266 (311)
T d1nr0a1         255 SASADKTIKIWN  266 (311)
T ss_dssp             EEETTSEEEEEE
T ss_pred             EEeCCCeEEEEE
Confidence            999999999996

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=6.4e-30  Score=191.81  Aligned_cols=165  Identities=21%  Similarity=0.272  Sum_probs=139.0

Q ss_pred             CCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee--eeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         12 GSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC--KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        12 ~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      ....+.||.++|.+++|+|++.+|++|+.|++|++||+++++.  ...+.+|..+|.+++|+|+++.|++++.|+++++|
T Consensus        43 ~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~  122 (371)
T d1k8kc_          43 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC  122 (371)
T ss_dssp             EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred             EEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceee
Confidence            3345789999999999999999999999999999999987754  44567789999999999999999999999999999


Q ss_pred             eCCCCCeeeEE--eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCc------------------eeeeeecCCCc
Q psy15417         90 DIRADQELAMY--SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKT------------------ERAGILAGHDN  149 (176)
Q Consensus        90 d~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~------------------~~~~~~~~~~~  149 (176)
                      ++.........  ....+...|.+++|+|++.++++|+.|+++++|+....                  +.......|..
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (371)
T d1k8kc_         123 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG  202 (371)
T ss_dssp             EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred             eeecccccccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccC
Confidence            98765443222  22333456889999999999999999999999996432                  23455567888


Q ss_pred             cEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        150 RVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       150 ~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      .+.+++|+|++..|++++.|+.|++||
T Consensus       203 ~v~~~~~s~~g~~l~s~~~d~~i~iwd  229 (371)
T d1k8kc_         203 WVHGVCFSANGSRVAWVSHDSTVCLAD  229 (371)
T ss_dssp             CEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred             cEEEEEeecccccccccccCCcceEEe
Confidence            999999999999999999999999996

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=3.8e-29  Score=180.61  Aligned_cols=160  Identities=23%  Similarity=0.381  Sum_probs=145.4

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCC--------------------
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNG--------------------   74 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~--------------------   74 (176)
                      .+.+|...+.+++|++++.+|++++.|+.|++|+.++++....+.+|...+.++++.|+.                    
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (317)
T d1vyhc1         138 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG  217 (317)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------C
T ss_pred             EEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCC
Confidence            356899999999999999999999999999999999999999999999999999998764                    


Q ss_pred             cEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEE
Q psy15417         75 WAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCL  154 (176)
Q Consensus        75 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~  154 (176)
                      ..+++++.|+.+++||+++++.+..+.  .+...+.++.++|++++|++|+.|+.|++||+.+++++..+.+|...|.++
T Consensus       218 ~~~~~~~~d~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~  295 (317)
T d1vyhc1         218 PFLLSGSRDKTIKMWDVSTGMCLMTLV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL  295 (317)
T ss_dssp             CEEEEEETTSEEEEEETTTTEEEEEEE--CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEE
T ss_pred             ceeEeccCCCEEEEEECCCCcEEEEEe--CCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEE
Confidence            368999999999999999887665543  233468899999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCEEEEccCCCcEEEeC
Q psy15417        155 GVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       155 ~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +|+|++.+|++|+.|++|+|||
T Consensus       296 ~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         296 DFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EECSSSSCEEEEETTSEEEEEC
T ss_pred             EEcCCCCEEEEEeCCCeEEEeC
Confidence            9999999999999999999997

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-28  Score=182.37  Aligned_cols=156  Identities=19%  Similarity=0.333  Sum_probs=140.2

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..+|...|.+++|++++..+++|+.|+.+++||+++++.+..+. |..+|.+++|+|++..+++++.|+.+++||+++.+
T Consensus       179 ~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~  257 (337)
T d1gxra_         179 FQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD  257 (337)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC
T ss_pred             ccccccccccccccccccccccccccccccccccccceeecccc-cccceEEEEEcccccccceeccccccccccccccc
Confidence            46799999999999999999999999999999999998887775 78899999999999999999999999999998876


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ......+.   ..|.++.|+|+++++++|+.|+.+++||...++++... .|...|.+++|+|++.+|++|+.|++|+||
T Consensus       258 ~~~~~~~~---~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~t~s~D~~I~vW  333 (337)
T d1gxra_         258 KYQLHLHE---SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVY  333 (337)
T ss_dssp             EEEECCCS---SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred             cccccccc---cccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEc-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence            65443333   46889999999999999999999999999888877665 477899999999999999999999999999


Q ss_pred             C
Q psy15417        176 N  176 (176)
Q Consensus       176 d  176 (176)
                      |
T Consensus       334 d  334 (337)
T d1gxra_         334 E  334 (337)
T ss_dssp             E
T ss_pred             E
Confidence            7

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.7e-29  Score=183.46  Aligned_cols=158  Identities=21%  Similarity=0.408  Sum_probs=137.0

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee-----eeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC-----KQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~-----~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      +|...|.|++|+|++++|++|+ ||.|++||+.++..     .....+|.+.|++++|+|++++|++++.|++|++||+.
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~  127 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA  127 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccc
Confidence            7999999999999999999998 89999999976532     22445789999999999999999999999999999987


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ............+...+..+.|+|++.++++++.++.+++|++..++.......|...+.+++|++++..+++|+.|+.+
T Consensus       128 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v  207 (337)
T d1gxra_         128 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV  207 (337)
T ss_dssp             CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            65443333333333467889999999999999999999999999999988899999999999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       208 ~i~d  211 (337)
T d1gxra_         208 RSWD  211 (337)
T ss_dssp             EEEE
T ss_pred             cccc
Confidence            9996

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1e-28  Score=178.30  Aligned_cols=162  Identities=25%  Similarity=0.417  Sum_probs=146.7

Q ss_pred             CcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCC
Q psy15417         13 SPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIR   92 (176)
Q Consensus        13 ~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~   92 (176)
                      .+.+.||++.|++++|+|++.+|+||+.||+|++||+++++++.++.+|..+|.+++|+|++..++++..++.+..|+..
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ   89 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccc
Confidence            34689999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      ..+.....  ..+...+.++.++|++..+++++.|+.+++||+.+++....+.+|...+.+++|+|++.+|++|+.|+.|
T Consensus        90 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v  167 (317)
T d1vyhc1          90 GFECIRTM--HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV  167 (317)
T ss_dssp             SSCEEECC--CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             cccccccc--ccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeE
Confidence            65543332  2222456789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++|+
T Consensus       168 ~~~~  171 (317)
T d1vyhc1         168 RVWV  171 (317)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9995

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=1.9e-28  Score=177.79  Aligned_cols=161  Identities=25%  Similarity=0.362  Sum_probs=129.0

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec-CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-GHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.||++.|++++|+|++++|+||+.||+|++||++++++...+. +|..+|++++|+|++. +++++.|+.+++|+...
T Consensus         7 ~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~~~~   85 (299)
T d1nr0a2           7 VRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKVVPAGG   85 (299)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEEECSSS
T ss_pred             EcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEEeccCC
Confidence            478999999999999999999999999999999999998887774 5788889999988875 55666788888887421


Q ss_pred             C-------------------------C-------------------------------------ee---------eEEe-
Q psy15417         94 D-------------------------Q-------------------------------------EL---------AMYS-  101 (176)
Q Consensus        94 ~-------------------------~-------------------------------------~~---------~~~~-  101 (176)
                      .                         .                                     .+         ..+. 
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~  165 (299)
T d1nr0a2          86 SGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKL  165 (299)
T ss_dssp             SSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            0                         0                                     00         0000 


Q ss_pred             ---------ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceee---eeecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417        102 ---------HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERA---GILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus       102 ---------~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                               ...+...|.+++|+|++.++++++.++.+++||..++...   ..+.+|...|.+++|+|++.+|++|+.|
T Consensus       166 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~d  245 (299)
T d1nr0a2         166 SGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD  245 (299)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceEEEcCC
Confidence                     0001124789999999999999999999999998765443   3456788999999999999999999999


Q ss_pred             CcEEEeC
Q psy15417        170 SFLRIWN  176 (176)
Q Consensus       170 ~~v~vwd  176 (176)
                      +.|++||
T Consensus       246 g~i~iwd  252 (299)
T d1nr0a2         246 NSVIVWN  252 (299)
T ss_dssp             SCEEEEE
T ss_pred             CEEEEEE
Confidence            9999996

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=3.3e-27  Score=178.18  Aligned_cols=158  Identities=16%  Similarity=0.185  Sum_probs=128.0

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeE------ecCCCCCeeEEEEccCCcEEEEeeCCCc---EE
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQT------FPGHESDINAVTFFPNGWAFATGSDDAT---CR   87 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~------~~~h~~~v~~v~~~~~~~~l~s~s~d~~---i~   87 (176)
                      ..+...+++++|+|++ +|++|+.||+|++||+.+++.+..      +.+|..+|++++|+|++++|++|+.|++   |+
T Consensus       181 ~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~  259 (393)
T d1sq9a_         181 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT  259 (393)
T ss_dssp             SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred             cCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceee
Confidence            3466778999999987 889999999999999999886654      4468999999999999999999999975   89


Q ss_pred             EeeCCCCCeeeEEee-----------cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCcc------
Q psy15417         88 LFDIRADQELAMYSH-----------DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR------  150 (176)
Q Consensus        88 iwd~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~------  150 (176)
                      +||+++++.+.....           ..|...|++++|+|++++|++|+.|++|++||+++++++.++.+|.+.      
T Consensus       260 lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~  339 (393)
T d1sq9a_         260 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEED  339 (393)
T ss_dssp             EEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGG
T ss_pred             ecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCcc
Confidence            999988776554321           123356899999999999999999999999999999999988888543      


Q ss_pred             ---------------EEEEEEeCC----------CCEEEEccCCCcEEEe
Q psy15417        151 ---------------VSCLGVTED----------GMAVATGSWDSFLRIW  175 (176)
Q Consensus       151 ---------------i~~~~~~~~----------~~~l~tg~~d~~v~vw  175 (176)
                                     +..+.|.+.          ...+++++.|+.+|+|
T Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~  389 (393)
T d1sq9a_         340 ILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF  389 (393)
T ss_dssp             CCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred             EEEECCCCCEEEEcccceEEECccCceeccccCCCCEEEEEEcCCeEEEE
Confidence                           345555443          2347788888888887

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=3.7e-26  Score=170.63  Aligned_cols=156  Identities=25%  Similarity=0.417  Sum_probs=131.0

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec------------------CCCCCeeEEEEccCCcEEEE
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP------------------GHESDINAVTFFPNGWAFAT   79 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~------------------~h~~~v~~v~~~~~~~~l~s   79 (176)
                      +|++.|+|++|+|||++|++|+ |++|++||+.+++.+..+.                  .|...|++++|+|++++|++
T Consensus        60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s  138 (388)
T d1erja_          60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  138 (388)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCccee
Confidence            6999999999999999999987 8999999999988776664                  35567999999999999999


Q ss_pred             eeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCC
Q psy15417         80 GSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTED  159 (176)
Q Consensus        80 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~  159 (176)
                      |+.|+.|++||...++.+....  .+...|.++.+++++..+++++.++.+++||............+...+....+.++
T Consensus       139 ~~~dg~v~i~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  216 (388)
T d1erja_         139 GAEDRLIRIWDIENRKIVMILQ--GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD  216 (388)
T ss_dssp             EETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT
T ss_pred             cccccccccccccccccccccc--cccccccccccccccccccccccceeeeeeeccccccccccccccccccccccCCC
Confidence            9999999999998776554432  23346889999999999999999999999998887777766655555544444557


Q ss_pred             CCEEEEccCCCcEEEeC
Q psy15417        160 GMAVATGSWDSFLRIWN  176 (176)
Q Consensus       160 ~~~l~tg~~d~~v~vwd  176 (176)
                      +.+|++|+.|+.|++||
T Consensus       217 ~~~l~~~~~d~~i~i~~  233 (388)
T d1erja_         217 GKYIAAGSLDRAVRVWD  233 (388)
T ss_dssp             CCEEEEEETTSCEEEEE
T ss_pred             CCeEEEEcCCCeEEEee
Confidence            89999999999999995

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.94  E-value=4.5e-26  Score=165.14  Aligned_cols=156  Identities=19%  Similarity=0.263  Sum_probs=125.5

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeee
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELA   98 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~   98 (176)
                      ...+.+++|+|++.++++|+.|+.+++||+++++... ....|..+|++++|+|++..+++++.|+.+++||+.++....
T Consensus       136 ~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~  215 (299)
T d1nr0a2         136 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELA  215 (299)
T ss_dssp             SSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEES
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3467889999999999999999999999998887543 345689999999999999999999999999999997765543


Q ss_pred             EE-eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCcee--eeeecCC-CccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         99 MY-SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTER--AGILAGH-DNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        99 ~~-~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~--~~~~~~~-~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      .. ....+...|.+++|+|++.++++|+.|+.|++||+.+...  ......| ...+.++.+. ++.+|++|+.|++|++
T Consensus       216 ~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~s~D~~i~i  294 (299)
T d1nr0a2         216 HTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKF  294 (299)
T ss_dssp             CCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEE-ETTEEEEEETTSCEEE
T ss_pred             ccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEEC-CCCEEEEEeCCCEEEE
Confidence            22 2233345789999999999999999999999999876543  2223333 4456666554 5679999999999999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       295 Wd  296 (299)
T d1nr0a2         295 WN  296 (299)
T ss_dssp             EE
T ss_pred             Ee
Confidence            97

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=8.9e-26  Score=166.45  Aligned_cols=160  Identities=18%  Similarity=0.152  Sum_probs=135.3

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-EEEEeeCCCcEEEeeCCC
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGAC--DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-AFATGSDDATCRLFDIRA   93 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~--dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~s~d~~i~iwd~~~   93 (176)
                      ..|.++|.+++|+++++++++++.  ++.+.+|+.++++++..+.+|..+|++++|+|++. .+++++.|+.+++||++.
T Consensus       112 ~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~  191 (325)
T d1pgua1         112 QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP  191 (325)
T ss_dssp             ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT
T ss_pred             ccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccc
Confidence            468899999999999999887765  66799999999999999999999999999999876 478899999999999877


Q ss_pred             CCeeeEEe-ecceEeceEEEEECCC-CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe---CCCCEEEEccC
Q psy15417         94 DQELAMYS-HDNIICGITSVAFSRS-GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT---EDGMAVATGSW  168 (176)
Q Consensus        94 ~~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~---~~~~~l~tg~~  168 (176)
                      .+...... +..+...|.+++|+|+ +.++++++.|+.|++||...++.+..+.+|...+..+.|+   |++.+|++|+.
T Consensus       192 ~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~  271 (325)
T d1pgua1         192 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGA  271 (325)
T ss_dssp             BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEET
T ss_pred             cccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeC
Confidence            65443332 2333356889999997 6889999999999999999999999998888776555554   67899999999


Q ss_pred             CCcEEEeC
Q psy15417        169 DSFLRIWN  176 (176)
Q Consensus       169 d~~v~vwd  176 (176)
                      |+.|+|||
T Consensus       272 D~~i~iwd  279 (325)
T d1pgua1         272 DATIRVWD  279 (325)
T ss_dssp             TSEEEEEE
T ss_pred             CCeEEEEE
Confidence            99999996

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=6.4e-25  Score=163.86  Aligned_cols=160  Identities=30%  Similarity=0.493  Sum_probs=135.5

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      ...+|...|.+++|+|++++|++|+.||.|++||..+++....+.+|...|.++++++++..+++++.++.+++||.++.
T Consensus       116 ~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~  195 (388)
T d1erja_         116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG  195 (388)
T ss_dssp             ---CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred             cccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeecccc
Confidence            34578899999999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee-------cCCCccEEEEEEeCCCCEEEEcc
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-------AGHDNRVSCLGVTEDGMAVATGS  167 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~tg~  167 (176)
                      ...........  .+....+.+++.++++|+.|+.+++||...+.....+       .+|...|.+++|+|++.+|++|+
T Consensus       196 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~  273 (388)
T d1erja_         196 QCSLTLSIEDG--VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS  273 (388)
T ss_dssp             EEEEEEECSSC--EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred             ccccccccccc--cccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence            65544433322  2333334457889999999999999998877655443       36788999999999999999999


Q ss_pred             CCCcEEEeC
Q psy15417        168 WDSFLRIWN  176 (176)
Q Consensus       168 ~d~~v~vwd  176 (176)
                      .|+.|++||
T Consensus       274 ~d~~i~iwd  282 (388)
T d1erja_         274 LDRSVKLWN  282 (388)
T ss_dssp             TTSEEEEEE
T ss_pred             CCCcEEEEe
Confidence            999999996

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.2e-25  Score=169.48  Aligned_cols=158  Identities=21%  Similarity=0.318  Sum_probs=126.6

Q ss_pred             CCccCeEEEEEcCC-----CCEEEEEeCCCeEEEEEcCCCe---------------e---eeEecCCCCCeeEEEEccCC
Q psy15417         18 GHTGDVMSLSLAPD-----MRTFVSGACDASAKLWDIRDGS---------------C---KQTFPGHESDINAVTFFPNG   74 (176)
Q Consensus        18 gh~~~V~~~~~~~~-----~~~l~s~s~dg~v~~wd~~~~~---------------~---~~~~~~h~~~v~~v~~~~~~   74 (176)
                      .+...+..+++.++     +.++++++.||++++|++....               .   ......+...+++++|+|++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg  196 (393)
T d1sq9a_         117 MKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG  196 (393)
T ss_dssp             GGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS
T ss_pred             cCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC
Confidence            35566778888765     4688999999999999975321               1   11122345668999999998


Q ss_pred             cEEEEeeCCCcEEEeeCCCCCeeeEEee----cceEeceEEEEECCCCcEEEEEcCCC---eEEEEeCCCceeeeee---
Q psy15417         75 WAFATGSDDATCRLFDIRADQELAMYSH----DNIICGITSVAFSRSGRLLLAGYDDF---NCNVWDSMKTERAGIL---  144 (176)
Q Consensus        75 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~g~~d~---~i~v~d~~~~~~~~~~---  144 (176)
                       +|++|+.|++|++||+++++.+..+..    ..+..+|.+++|+|++++|++|+.|+   .|++||+.+++.+..+   
T Consensus       197 -~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~  275 (393)
T d1sq9a_         197 -LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP  275 (393)
T ss_dssp             -EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC
T ss_pred             -EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccc
Confidence             889999999999999998876655442    23445799999999999999999886   4899999887766654   


Q ss_pred             ----------cCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        145 ----------AGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       145 ----------~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                                .+|.+.|.+++|+|++.+|++|+.|++|+|||
T Consensus       276 ~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd  317 (393)
T d1sq9a_         276 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD  317 (393)
T ss_dssp             --------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             cccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEE
Confidence                      37999999999999999999999999999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.7e-25  Score=161.89  Aligned_cols=163  Identities=22%  Similarity=0.377  Sum_probs=127.9

Q ss_pred             ccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEE
Q psy15417          9 ALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRL   88 (176)
Q Consensus         9 ~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~i   88 (176)
                      .+.....+.||++.|.+ ++++++++|+||+.||+|++||+++++++.++.+|..+|.+++|+|+  .|++++.|+.+++
T Consensus         5 ~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~   81 (342)
T d2ovrb2           5 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKV   81 (342)
T ss_dssp             CCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEE
T ss_pred             CCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccc
Confidence            34455568999999865 35667899999999999999999999999999999999999999864  8999999999999


Q ss_pred             eeCCCCCeeeEEe-----------------------------ec-------------------------------ceE--
Q psy15417         89 FDIRADQELAMYS-----------------------------HD-------------------------------NII--  106 (176)
Q Consensus        89 wd~~~~~~~~~~~-----------------------------~~-------------------------------~~~--  106 (176)
                      |+...........                             ..                               ...  
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  161 (342)
T d2ovrb2          82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV  161 (342)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred             cccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEE
Confidence            9865432110000                             00                               000  


Q ss_pred             --------------eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417        107 --------------CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus       107 --------------~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                                    .......+.+++..+++|+.|+.+++||+..++++....+|...+.++++.+  .+|++|+.|+.|
T Consensus       162 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~s~d~~i  239 (342)
T d2ovrb2         162 WDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTV  239 (342)
T ss_dssp             EEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET--TEEEEEETTSCE
T ss_pred             eecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC--CEEEEEcCCCEE
Confidence                          0011233445778899999999999999999999999999999998877764  599999999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       240 ~iwd  243 (342)
T d2ovrb2         240 KIWD  243 (342)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9996

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1e-25  Score=163.79  Aligned_cols=80  Identities=9%  Similarity=0.106  Sum_probs=69.0

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee---eEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEee
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK---QTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFD   90 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~---~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd   90 (176)
                      ...+|++.|++++|+|++.+|++|+.||+|++||++++...   ....+|..+|.+++|+|+ +..+++|+.|+.+++|+
T Consensus         6 ~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~   85 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred             cCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeee
Confidence            56789999999999999999999999999999999765432   233369999999999986 56899999999999999


Q ss_pred             CCCC
Q psy15417         91 IRAD   94 (176)
Q Consensus        91 ~~~~   94 (176)
                      +...
T Consensus        86 ~~~~   89 (342)
T d1yfqa_          86 LIGS   89 (342)
T ss_dssp             SSSS
T ss_pred             cccc
Confidence            8654

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=6.7e-25  Score=160.54  Aligned_cols=159  Identities=22%  Similarity=0.384  Sum_probs=117.9

Q ss_pred             ccCCCccCe-EEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCC
Q psy15417         15 AASGHTGDV-MSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRA   93 (176)
Q Consensus        15 ~~~gh~~~V-~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~   93 (176)
                      .+.||...| .|++|  ++++|+||+.||+|++||+.+++++.++.+|.++|++++|+|++ .|++++.|+++++|++..
T Consensus         7 tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~-~l~s~s~D~~i~iw~~~~   83 (355)
T d1nexb2           7 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK   83 (355)
T ss_dssp             EEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTT-EEEEEETTCCEEEEETTT
T ss_pred             EECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCC-EEEEEecccccccccccc
Confidence            478999875 56665  57899999999999999999999999999999999999999864 799999999999999876


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeE-------------------------------------------
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNC-------------------------------------------  130 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i-------------------------------------------  130 (176)
                      .+..................+++++..+++++.|+.+                                           
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (355)
T d1nexb2          84 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS  163 (355)
T ss_dssp             TEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSC
T ss_pred             cccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccc
Confidence            6543332222211222233344444444444444444                                           


Q ss_pred             --------------------EEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        131 --------------------NVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       131 --------------------~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                                          ++||+.+++......++...+.++.++|++..+++++.|+.|++||
T Consensus       164 v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d  229 (355)
T d1nexb2         164 VRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWD  229 (355)
T ss_dssp             EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             ccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeee
Confidence                                4455444444555556677788889999999999999999999985

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.1e-24  Score=160.62  Aligned_cols=160  Identities=17%  Similarity=0.174  Sum_probs=124.7

Q ss_pred             cCCCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEe---cCCCCCeeEEEEccC-CcEEEEeeCCCcEEEee
Q psy15417         16 ASGHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTF---PGHESDINAVTFFPN-GWAFATGSDDATCRLFD   90 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~---~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd   90 (176)
                      +.+|...|.+++|+|++. .+++++.|+.+++||..+.+....+   .+|...|.+++|+|+ +..+++++.|+.|++||
T Consensus       155 ~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd  234 (325)
T d1pgua1         155 VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD  234 (325)
T ss_dssp             CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred             eeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeee
Confidence            568999999999999876 4788999999999999887765554   456788999999996 68899999999999999


Q ss_pred             CCCCCeeeEEee-cceE-eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCcc--EEEEEEeCC-CCEEEE
Q psy15417         91 IRADQELAMYSH-DNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR--VSCLGVTED-GMAVAT  165 (176)
Q Consensus        91 ~~~~~~~~~~~~-~~~~-~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~--i~~~~~~~~-~~~l~t  165 (176)
                      +++++.+..+.. .... ..+.++.+ |++.+|++++.|++|+|||++.++++..+..|...  +..+++.+. +.+|++
T Consensus       235 ~~~~~~~~~l~~~~~~v~~~~~s~~~-~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  313 (325)
T d1pgua1         235 GKSGEFLKYIEDDQEPVQGGIFALSW-LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIIS  313 (325)
T ss_dssp             TTTCCEEEECCBTTBCCCSCEEEEEE-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEE
T ss_pred             eccccccccccccccccccceeeeec-cCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEE
Confidence            998877655442 2111 12334444 57899999999999999999999888877655442  333444332 357899


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      |+.|++|++||
T Consensus       314 ~s~dg~i~vwd  324 (325)
T d1pgua1         314 LSLDGTLNFYE  324 (325)
T ss_dssp             EETTSCEEEEE
T ss_pred             EECCCEEEEEE
Confidence            99999999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.2e-24  Score=153.95  Aligned_cols=155  Identities=26%  Similarity=0.441  Sum_probs=127.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +.+|...+.++.  +++.++++|+.||.|++||+++++++..+.+|...+.++.+.  ++++++++.|+.|++||+...+
T Consensus       173 ~~~~~~~~~~~~--~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~  248 (342)
T d2ovrb2         173 LQGHTNRVYSLQ--FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQ  248 (342)
T ss_dssp             ECCCSSCEEEEE--ECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC
T ss_pred             EcCccccccccc--CCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEEEEcCCCEEEEEeccccc
Confidence            466777766655  467899999999999999999999999999999999887775  5699999999999999998776


Q ss_pred             eeeEEe-ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeec-----CCCccEEEEEEeCCCCEEEEccCC
Q psy15417         96 ELAMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILA-----GHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus        96 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      ...... ...+...+.++.++  +.++++|+.||+|++||+++++.+..+.     +|...|.+++|+|++.+|++|+.|
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~d  326 (342)
T d2ovrb2         249 CLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN  326 (342)
T ss_dssp             EEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSS
T ss_pred             ccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence            655443 22333445666664  5789999999999999999988776653     567789999999999999999999


Q ss_pred             Cc----EEEeC
Q psy15417        170 SF----LRIWN  176 (176)
Q Consensus       170 ~~----v~vwd  176 (176)
                      |+    +++||
T Consensus       327 Gt~~~~l~~~D  337 (342)
T d2ovrb2         327 GTEETKLLVLD  337 (342)
T ss_dssp             SSSCCEEEEEE
T ss_pred             CCCeeEEEEEe
Confidence            85    88886

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.5e-23  Score=148.37  Aligned_cols=154  Identities=27%  Similarity=0.513  Sum_probs=104.7

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      -..+|...|+|++  +++++|+||+.||+|++||+++++++.++++|..+|.+++|  ++++|++++.|+.+++|+++.+
T Consensus        10 ~~~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~   85 (293)
T d1p22a2          10 CRSETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG   85 (293)
T ss_dssp             CCCSSCCCEEEEE--CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred             ccCCCCCCEEEEE--EcCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccccccc
Confidence            3567889999976  47899999999999999999999999999999999998877  6789999999999999998765


Q ss_pred             CeeeEEeec-----------------------------------------ceEeceEEEEECCCCcEEEEEcCCCeEEEE
Q psy15417         95 QELAMYSHD-----------------------------------------NIICGITSVAFSRSGRLLLAGYDDFNCNVW  133 (176)
Q Consensus        95 ~~~~~~~~~-----------------------------------------~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~  133 (176)
                      .........                                         .+...+....+  ....+++++.|+.+++|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~s~d~~i~~~  163 (293)
T d1p22a2          86 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVW  163 (293)
T ss_dssp             CEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred             cccccccccccccccccccccceeecccccceeEeecccccccccccccccccccccccee--cccccccccCCCceeee
Confidence            322111100                                         00001222222  22344555566666666


Q ss_pred             eCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        134 DSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       134 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      |..+.+....+.++...+..+.+.  +.++++++.|++|++||
T Consensus       164 d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d  204 (293)
T d1p22a2         164 NTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWD  204 (293)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred             cCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEe
Confidence            666666655555555555554443  34566666666666664

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.8e-23  Score=152.78  Aligned_cols=153  Identities=18%  Similarity=0.280  Sum_probs=126.4

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..++...+.++.|+|++.++++++.|++|++||.+++..+..+++|..+|.+++++  ++++++++.|+.|++||+++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~  274 (355)
T d1nexb2         197 LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS  274 (355)
T ss_dssp             ECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCC
T ss_pred             eeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccccc--cceeeeeecccccccccccccc
Confidence            45788889999999999999999999999999999999999999999999999986  4689999999999999998765


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      ......... .  .....+++++.++++| .|++|++||+++++.+. .+.+|...|.+++|+|+ ..+++++.||+++|
T Consensus       275 ~~~~~~~~~-~--~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l  349 (355)
T d1nexb2         275 RKFSYHHTN-L--SAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFL  349 (355)
T ss_dssp             EEEEEECTT-C--CCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEE
T ss_pred             eecccccCC-c--eEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEE
Confidence            543332221 1  1223456777777766 48899999999888774 56789999999999986 57889999999777


Q ss_pred             e
Q psy15417        175 W  175 (176)
Q Consensus       175 w  175 (176)
                      |
T Consensus       350 ~  350 (355)
T d1nexb2         350 E  350 (355)
T ss_dssp             E
T ss_pred             E
Confidence            6

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=2.1e-23  Score=150.15  Aligned_cols=149  Identities=13%  Similarity=0.190  Sum_probs=119.9

Q ss_pred             EEEcCCCCEEEEEeCCC-eEEEEEcCCCeeeeEec-CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417         26 LSLAPDMRTFVSGACDA-SAKLWDIRDGSCKQTFP-GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~dg-~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~  103 (176)
                      ..+++++..+++++.++ .+++|++...+....+. .|..++++++|+|++.+|++++.|+.|++||+.+.+.... ...
T Consensus       124 ~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~-~~~  202 (287)
T d1pgua2         124 SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTS-RWA  202 (287)
T ss_dssp             EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEC-CSC
T ss_pred             eeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccc-ccc
Confidence            45567778888777775 69999998766555554 4678899999999999999999999999999987654321 122


Q ss_pred             ceEeceEEEEECCC----------CcEEEEEcCCCeEEEEeCCC-ceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcE
Q psy15417        104 NIICGITSVAFSRS----------GRLLLAGYDDFNCNVWDSMK-TERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFL  172 (176)
Q Consensus       104 ~~~~~v~~~~~~~~----------~~~l~~g~~d~~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v  172 (176)
                      .+..++.+++|+|.          +.++++|+.|+++++||+++ .+....+.+|...|.+++|+|++ .|++++.|++|
T Consensus       203 ~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v  281 (287)
T d1pgua2         203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACI  281 (287)
T ss_dssp             CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCE
T ss_pred             ccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeE
Confidence            23346888999875          46899999999999999876 55667778999999999999986 68899999999


Q ss_pred             EEeC
Q psy15417        173 RIWN  176 (176)
Q Consensus       173 ~vwd  176 (176)
                      ++||
T Consensus       282 ~iW~  285 (287)
T d1pgua2         282 KRWN  285 (287)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9996

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=5.8e-24  Score=153.18  Aligned_cols=152  Identities=19%  Similarity=0.213  Sum_probs=120.9

Q ss_pred             ccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         15 AASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        15 ~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+.||.++|++++|+|    |+||+.||+|++||+.++     .++|...|.++++.++. .+++++.|+++++|++...
T Consensus         8 ~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~   77 (287)
T d1pgua2           8 TISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKH   77 (287)
T ss_dssp             EECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE-----ECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEE
T ss_pred             EECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC-----CCCCCCCEEEEEecCCC-eEEEEeecccccccccccc
Confidence            5789999999999987    899999999999998754     36799999999988765 5789999999999975321


Q ss_pred             C----------------------------------eeeEEeec-------------------------------------
Q psy15417         95 Q----------------------------------ELAMYSHD-------------------------------------  103 (176)
Q Consensus        95 ~----------------------------------~~~~~~~~-------------------------------------  103 (176)
                      +                                  .+......                                     
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~  157 (287)
T d1pgua2          78 EFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDL  157 (287)
T ss_dssp             ECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEEC
T ss_pred             ccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccccceeeee
Confidence            0                                  00000000                                     


Q ss_pred             --ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeee-eecCCCccEEEEEEeCC----------CCEEEEccCCC
Q psy15417        104 --NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAG-ILAGHDNRVSCLGVTED----------GMAVATGSWDS  170 (176)
Q Consensus       104 --~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~----------~~~l~tg~~d~  170 (176)
                        .+...+.+++|+|++.+|++|+.|+.+++||...++... ....|...|.+++|+|.          +.+|++|+.|+
T Consensus       158 ~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~  237 (287)
T d1pgua2         158 KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT  237 (287)
T ss_dssp             SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS
T ss_pred             eeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCC
Confidence              000137899999999999999999999999988877654 46789999999999864          46899999999


Q ss_pred             cEEEeC
Q psy15417        171 FLRIWN  176 (176)
Q Consensus       171 ~v~vwd  176 (176)
                      +|++||
T Consensus       238 ~i~iw~  243 (287)
T d1pgua2         238 NIFIYS  243 (287)
T ss_dssp             CEEEEE
T ss_pred             eEEEEE
Confidence            999996

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.88  E-value=2e-21  Score=142.91  Aligned_cols=156  Identities=13%  Similarity=0.098  Sum_probs=127.8

Q ss_pred             CCCccCeEEEEEcCCCCEEEEEeCCC--eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCC
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSGACDA--SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRAD   94 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~s~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~   94 (176)
                      .+|.+.|.+++|+||++.|++++.+.  .+++||.++++.. .+..|...|.+++|+|+++++++++.++.+++|++.+.
T Consensus        39 ~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~  117 (360)
T d1k32a3          39 VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG  117 (360)
T ss_dssp             CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-EeeCCCceEEeeeecccccccceecccccccccccccc
Confidence            47999999999999999988777654  6899999987644 56779999999999999999999999999999999887


Q ss_pred             CeeeEEeecceEeceEEEEECCCCcEEEEE----------cCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE
Q psy15417         95 QELAMYSHDNIICGITSVAFSRSGRLLLAG----------YDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        95 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g----------~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      +.........  ..+.+++|+|++++++.+          ..++.+++||...++.... ..+...+..++|+|+|..|+
T Consensus       118 ~~~~~~~~~~--~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~-~~~~~~~~~~~~spdg~~l~  194 (360)
T d1k32a3         118 KPTVIERSRE--AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA-TTENSHDYAPAFDADSKNLY  194 (360)
T ss_dssp             CEEEEEECSS--SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC-SCSSSBEEEEEECTTSCEEE
T ss_pred             ceeeeeeccc--ccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeee-cccccccccccccCCCCEEE
Confidence            7655443222  345679999999988753          3455789999877665443 34666778899999999999


Q ss_pred             EccCCCcEEEeC
Q psy15417        165 TGSWDSFLRIWN  176 (176)
Q Consensus       165 tg~~d~~v~vwd  176 (176)
                      +++.|+.+++||
T Consensus       195 ~~s~~~~~~~~d  206 (360)
T d1k32a3         195 YLSYRSLDPSPD  206 (360)
T ss_dssp             EEESCCCCCEEC
T ss_pred             EEeCCCceEccc
Confidence            999999999886

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.8e-21  Score=134.93  Aligned_cols=151  Identities=24%  Similarity=0.382  Sum_probs=123.2

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCC
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~   95 (176)
                      +..|...|.++.+.+  ..+++++.|+.+++||.++++.+..+.++...+..+.+.  +..+++++.|++|++||+++..
T Consensus       134 ~~~~~~~v~~~~~~~--~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~  209 (293)
T d1p22a2         134 LVGHRAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA  209 (293)
T ss_dssp             ECCCSSCEEEEEEET--TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC
T ss_pred             ccccccccccceecc--cccccccCCCceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccce
Confidence            457888888877754  568899999999999999999999999999888877764  5689999999999999999877


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC---------ceeeeeecCCCccEEEEEEeCCCCEEEEc
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK---------TERAGILAGHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      .+.......  ..+.  .+.+++..+++|+.|+.+++||+..         ...+..+.+|.+.|.+++|.  +.+|+||
T Consensus       210 ~~~~~~~~~--~~v~--~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~  283 (293)
T d1p22a2         210 CLRVLEGHE--ELVR--CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSS  283 (293)
T ss_dssp             EEEEECCCS--SCEE--EEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEEC
T ss_pred             eeeeecccc--eeee--eccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEE
Confidence            765543222  2333  3556788999999999999999532         24566778999999999884  5689999


Q ss_pred             cCCCcEEEeC
Q psy15417        167 SWDSFLRIWN  176 (176)
Q Consensus       167 ~~d~~v~vwd  176 (176)
                      |.|++|+|||
T Consensus       284 s~Dg~i~iWD  293 (293)
T d1p22a2         284 SHDDTILIWD  293 (293)
T ss_dssp             CSSSEEEEEC
T ss_pred             ecCCEEEEeC
Confidence            9999999998

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.87  E-value=2.8e-21  Score=142.06  Aligned_cols=146  Identities=11%  Similarity=0.113  Sum_probs=120.8

Q ss_pred             EEEEcC-CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC--cEEEeeCCCCCeeeEEe
Q psy15417         25 SLSLAP-DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--TCRLFDIRADQELAMYS  101 (176)
Q Consensus        25 ~~~~~~-~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~  101 (176)
                      .-+||| ||+++++++ +|.|.+||+..++..+ + +|...|++++|+|+|+.|++++.+.  .+++||.++++......
T Consensus         7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~   83 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEE   83 (360)
T ss_dssp             EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred             cccccCCCCCEEEEEE-CCeEEEEECCCCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeC
Confidence            467999 999999887 6799999998887654 3 5899999999999999888776553  79999998876544333


Q ss_pred             ecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEc----------cCCCc
Q psy15417        102 HDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATG----------SWDSF  171 (176)
Q Consensus       102 ~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg----------~~d~~  171 (176)
                         +...+..++|+|+++++++++.++.+++|+...++.......|...+.+++|+|+|.+|+.+          ..++.
T Consensus        84 ---~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~  160 (360)
T d1k32a3          84 ---NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA  160 (360)
T ss_dssp             ---CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred             ---CCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccc
Confidence               23467899999999999999999999999999988888888888888999999999999843          44556


Q ss_pred             EEEeC
Q psy15417        172 LRIWN  176 (176)
Q Consensus       172 v~vwd  176 (176)
                      +++||
T Consensus       161 ~~v~d  165 (360)
T d1k32a3         161 IHVYD  165 (360)
T ss_dssp             EEEEE
T ss_pred             eeeec
Confidence            77775

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=1.6e-19  Score=130.64  Aligned_cols=158  Identities=12%  Similarity=0.136  Sum_probs=112.0

Q ss_pred             CCCccCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCeeeeEecCCC---------------------------------
Q psy15417         17 SGHTGDVMSLSLAPD-MRTFVSGACDASAKLWDIRDGSCKQTFPGHE---------------------------------   62 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~-~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~---------------------------------   62 (176)
                      .+|.++|.+++|+|+ +.++++|+.||+|++|+...+........+.                                 
T Consensus        53 ~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~  132 (342)
T d1yfqa_          53 LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNY  132 (342)
T ss_dssp             EECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHH
T ss_pred             cCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccccccccccccccceeecccc
Confidence            479999999999986 4589999999999999987654333222111                                 


Q ss_pred             ----------------CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE----------------ee--------
Q psy15417         63 ----------------SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY----------------SH--------  102 (176)
Q Consensus        63 ----------------~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~----------------~~--------  102 (176)
                                      .......+.+.+..+++++.|+.+++|+++..+.....                ..        
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (342)
T d1yfqa_         133 GDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS  212 (342)
T ss_dssp             TTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred             ccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEee
Confidence                            11223344556667788888888888887543211000                00        


Q ss_pred             --c---------------------------------ceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC
Q psy15417        103 --D---------------------------------NIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH  147 (176)
Q Consensus       103 --~---------------------------------~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~  147 (176)
                        .                                 .+...+++++|+|++.+|++|+.||.|++||+.+++.+..+..+
T Consensus       213 s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~  292 (342)
T d1yfqa_         213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF  292 (342)
T ss_dssp             ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred             cCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC
Confidence              0                                 00113578999999999999999999999999999888877644


Q ss_pred             CccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        148 DNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       148 ~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      . ....++|+|++.++++++.|+.+++|
T Consensus       293 ~-~~~~~~~s~~~~~l~~a~sdd~~~~~  319 (342)
T d1yfqa_         293 N-EDSVVKIACSDNILCLATSDDTFKTN  319 (342)
T ss_dssp             S-SSEEEEEEECSSEEEEEEECTHHHHC
T ss_pred             C-CCEEEEEEeCCCEEEEEEcCCcEEEe
Confidence            3 34457788999999999888887766

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.77  E-value=1.1e-17  Score=121.46  Aligned_cols=171  Identities=14%  Similarity=0.048  Sum_probs=118.3

Q ss_pred             ccccccccCCCcccCCCccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCC-----CeeEEEEccCCcE
Q psy15417          3 DHLDKSALLGSPAASGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHES-----DINAVTFFPNGWA   76 (176)
Q Consensus         3 ~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~-----~v~~v~~~~~~~~   76 (176)
                      ++.++.++....+...+...+..++|+|||+++ ++++.++.|.+||+++++.+..+..+..     .+..++|+|+++.
T Consensus        16 ~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~   95 (337)
T d1pbyb_          16 IDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT   95 (337)
T ss_dssp             EETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSE
T ss_pred             EECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcE
Confidence            344555555555555555667899999999977 5677899999999999998888876543     3457899999988


Q ss_pred             EEEeeC------------CCcEEEeeCCCCCeeeEEeecce---------------------------------------
Q psy15417         77 FATGSD------------DATCRLFDIRADQELAMYSHDNI---------------------------------------  105 (176)
Q Consensus        77 l~s~s~------------d~~i~iwd~~~~~~~~~~~~~~~---------------------------------------  105 (176)
                      ++.+..            +..+.+||..+............                                       
T Consensus        96 l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~  175 (337)
T d1pbyb_          96 LAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSW  175 (337)
T ss_dssp             EEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTT
T ss_pred             EEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCCcceeeeecCcEEEEeecCCc
Confidence            877763            45666676543321111110000                                       


Q ss_pred             ----------------------------------------------------------------EeceEEEEECCCCcEE
Q psy15417        106 ----------------------------------------------------------------ICGITSVAFSRSGRLL  121 (176)
Q Consensus       106 ----------------------------------------------------------------~~~v~~~~~~~~~~~l  121 (176)
                                                                                      ........++|++.++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (337)
T d1pbyb_         176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA  255 (337)
T ss_dssp             TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred             cccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEE
Confidence                                                                            0012234455666655


Q ss_pred             EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        122 LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       122 ~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +.+  ++.+++||+.+++.+..+. +...+.+++|+|+|.+|++++.|++|+|||
T Consensus       256 ~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D  307 (337)
T d1pbyb_         256 FGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYD  307 (337)
T ss_dssp             EEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred             EEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            544  4678899988888777664 455678999999999999999999999997

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.76  E-value=2.8e-17  Score=125.25  Aligned_cols=145  Identities=10%  Similarity=-0.015  Sum_probs=112.2

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE--ee-cceEe
Q psy15417         31 DMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY--SH-DNIIC  107 (176)
Q Consensus        31 ~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~--~~-~~~~~  107 (176)
                      +..++++.+.+|+|.+||.++++++..++.+. .+..++|+|||+++++++.|+++++||+.+++.....  +. ..+..
T Consensus        31 ~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~  109 (432)
T d1qksa2          31 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS  109 (432)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred             CcEEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCC
Confidence            33456899999999999999999999998774 5999999999999999999999999999876543222  21 12222


Q ss_pred             ceEEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCC-----------CccEEEEEEeCCCCEE-EEccCCCcEEE
Q psy15417        108 GITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGH-----------DNRVSCLGVTEDGMAV-ATGSWDSFLRI  174 (176)
Q Consensus       108 ~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~l-~tg~~d~~v~v  174 (176)
                      -+.+..|+|||+++ +++..++++++||..+++....+..|           ......+.++|++..+ ++...++.|.+
T Consensus       110 ~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~  189 (432)
T d1qksa2         110 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL  189 (432)
T ss_dssp             EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred             eEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEE
Confidence            34455678899875 77888999999999988877665433           3445678889988765 56777888888


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       190 ~d  191 (432)
T d1qksa2         190 VD  191 (432)
T ss_dssp             EE
T ss_pred             EE
Confidence            74

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.74  E-value=5.3e-16  Score=110.95  Aligned_cols=168  Identities=14%  Similarity=0.152  Sum_probs=116.9

Q ss_pred             cccccccCCCcccCCCccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEE-EEee
Q psy15417          4 HLDKSALLGSPAASGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGS   81 (176)
Q Consensus         4 ~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s   81 (176)
                      ++++..++.+...   ...+..++|+|||++| ++++.++.|.+||+.+++.+.++..+.. +..+.|++++..+ +++.
T Consensus        18 D~~t~~~~~~i~~---g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   93 (301)
T d1l0qa2          18 DVTSNKVTATIPV---GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVSPDGKQVYVTNM   93 (301)
T ss_dssp             ETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEET
T ss_pred             ECCCCeEEEEEEC---CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-cccccccccccccccccc
Confidence            3445555443332   2446789999999976 5777899999999999999999987754 6889999988754 4455


Q ss_pred             CCCcEEEeeCCCCCeeeEEeecce------------------------------------------E-------------
Q psy15417         82 DDATCRLFDIRADQELAMYSHDNI------------------------------------------I-------------  106 (176)
Q Consensus        82 ~d~~i~iwd~~~~~~~~~~~~~~~------------------------------------------~-------------  106 (176)
                      .+..+.+|+..+++..........                                          .             
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (301)
T d1l0qa2          94 ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVY  173 (301)
T ss_dssp             TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEE
T ss_pred             ccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeecccccee
Confidence            567788888765432211110000                                          0             


Q ss_pred             --------------------------eceEEEEECCCCcEEEEEc---CCCeEEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417        107 --------------------------CGITSVAFSRSGRLLLAGY---DDFNCNVWDSMKTERAGILAGHDNRVSCLGVT  157 (176)
Q Consensus       107 --------------------------~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~  157 (176)
                                                .....+.+++++..++.+.   .++++++||..+++....+..+ ..+..++|+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~va~s  252 (301)
T d1l0qa2         174 VANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVT  252 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEEC
T ss_pred             eecccccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC-CCEEEEEEe
Confidence                                      0134566788877665443   3467999998888877776544 457899999


Q ss_pred             CCCCEE-EEccCCCcEEEeC
Q psy15417        158 EDGMAV-ATGSWDSFLRIWN  176 (176)
Q Consensus       158 ~~~~~l-~tg~~d~~v~vwd  176 (176)
                      |+|++| ++++.|++|++||
T Consensus       253 pdg~~l~va~~~~~~i~v~D  272 (301)
T d1l0qa2         253 PDGKKVYVALSFCNTVSVID  272 (301)
T ss_dssp             TTSSEEEEEETTTTEEEEEE
T ss_pred             CCCCEEEEEECCCCeEEEEE
Confidence            999976 6888899999997

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=3.5e-17  Score=124.14  Aligned_cols=131  Identities=11%  Similarity=-0.006  Sum_probs=98.8

Q ss_pred             CEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEee---cceEece
Q psy15417         33 RTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH---DNIICGI  109 (176)
Q Consensus        33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~~~~~~v  109 (176)
                      .++++.+.||+|++||+.+++.+.+++.|. .+.+++|+|||+++++++.|+++++||+.+.+.......   ..+..-+
T Consensus        33 ~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~  111 (426)
T d1hzua2          33 LFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVE  111 (426)
T ss_dssp             EEEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEE
T ss_pred             EEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceE
Confidence            366888899999999999999999999875 589999999999999999999999999988765433221   1222334


Q ss_pred             EEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCCCcc-----------EEEEEEeCCCCEEE
Q psy15417        110 TSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNR-----------VSCLGVTEDGMAVA  164 (176)
Q Consensus       110 ~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~~~~-----------i~~~~~~~~~~~l~  164 (176)
                      .++.|+|||+++ +++..++.+++||..+.+.......|...           ...+++++++..++
T Consensus       112 ~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~  178 (426)
T d1hzua2         112 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI  178 (426)
T ss_dssp             ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred             EeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEE
Confidence            567788999876 55568899999999888777666554333           34445555555443

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=1.2e-17  Score=126.71  Aligned_cols=170  Identities=10%  Similarity=0.021  Sum_probs=114.5

Q ss_pred             cccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee--Eec---CCCCCeeEEEEccCCcEE-
Q psy15417          4 HLDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFP---GHESDINAVTFFPNGWAF-   77 (176)
Q Consensus         4 ~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~--~~~---~h~~~v~~v~~~~~~~~l-   77 (176)
                      +.++..++.+  +.+|. .+..++|||||+++++++.|+++++||+.+++...  .++   +|...+.+++|+|+|+++ 
T Consensus        48 D~~t~~~~~~--l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~  124 (426)
T d1hzua2          48 DGDSKKIVKV--IDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTI  124 (426)
T ss_dssp             ETTTCSEEEE--EECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEE
T ss_pred             ECCCCcEEEE--EeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEE
Confidence            3444444443  33453 58899999999999999999999999999886443  232   455556777888999876 


Q ss_pred             EEeeCCCcEEEeeCCCCCeeeEEee------------cc-----------------------------------------
Q psy15417         78 ATGSDDATCRLFDIRADQELAMYSH------------DN-----------------------------------------  104 (176)
Q Consensus        78 ~s~s~d~~i~iwd~~~~~~~~~~~~------------~~-----------------------------------------  104 (176)
                      +++..++.+++||..+.........            ..                                         
T Consensus       125 v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  204 (426)
T d1hzua2         125 AGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG  204 (426)
T ss_dssp             EEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEE
T ss_pred             EeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEec
Confidence            4555789999999876543221110            00                                         


Q ss_pred             eEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCCc---------------------------------------------
Q psy15417        105 IICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKT---------------------------------------------  138 (176)
Q Consensus       105 ~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~---------------------------------------------  138 (176)
                      ....+..+.|+|++++++++. .+..+.+++...+                                             
T Consensus       205 ~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~  284 (426)
T d1hzua2         205 AAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTD  284 (426)
T ss_dssp             CCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECC
T ss_pred             cCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeecc
Confidence            001134678888888765543 3344555553322                                             


Q ss_pred             ---------eeeeeecCCCccEEEEEEeCCCCEEE-------EccCCCcEEEeC
Q psy15417        139 ---------ERAGILAGHDNRVSCLGVTEDGMAVA-------TGSWDSFLRIWN  176 (176)
Q Consensus       139 ---------~~~~~~~~~~~~i~~~~~~~~~~~l~-------tg~~d~~v~vwd  176 (176)
                               +....+.+|...+..++|+|++.+|+       +++.|++|+|||
T Consensus       285 ~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd  338 (426)
T d1hzua2         285 PKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD  338 (426)
T ss_dssp             TTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEE
T ss_pred             ccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEE
Confidence                     22334456777788899999999999       567789999996

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.73  E-value=5.9e-17  Score=123.46  Aligned_cols=169  Identities=8%  Similarity=-0.130  Sum_probs=118.6

Q ss_pred             ccccccCCCcccCCCccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCee--eeEec---CCCCCeeEEEEccCCcEE-E
Q psy15417          5 LDKSALLGSPAASGHTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSC--KQTFP---GHESDINAVTFFPNGWAF-A   78 (176)
Q Consensus         5 ~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~--~~~~~---~h~~~v~~v~~~~~~~~l-~   78 (176)
                      .++..++...  ..| ..+..++|||||+++++++.|+++.+||+.+++.  ...++   +|...+.+..|+|||+++ +
T Consensus        49 ~~t~~v~~~~--~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~v  125 (432)
T d1qksa2          49 GSTYEIKTVL--DTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIA  125 (432)
T ss_dssp             TTTCCEEEEE--ECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEE
T ss_pred             CCCCcEEEEE--eCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEE
Confidence            3444554432  334 3589999999999999999999999999988763  23333   345556666778899875 7


Q ss_pred             EeeCCCcEEEeeCCCCCeeeEEeecc---------eEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeee-cCC
Q psy15417         79 TGSDDATCRLFDIRADQELAMYSHDN---------IICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGIL-AGH  147 (176)
Q Consensus        79 s~s~d~~i~iwd~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~-~~~  147 (176)
                      +++.++++++||..+.+.+.......         .......+.++|++..+ ++...++.+.+||....+..... ..+
T Consensus       126 s~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~  205 (432)
T d1qksa2         126 GAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA  205 (432)
T ss_dssp             EEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC
T ss_pred             EcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcc
Confidence            88889999999998887665443211         11235578899998765 66777899999997765533321 234


Q ss_pred             CccEEEEEEeCCCCEEEEccCCC-cEEEeC
Q psy15417        148 DNRVSCLGVTEDGMAVATGSWDS-FLRIWN  176 (176)
Q Consensus       148 ~~~i~~~~~~~~~~~l~tg~~d~-~v~vwd  176 (176)
                      ......++|+|+|.++++++.++ .+.++|
T Consensus       206 g~~~~~~~~spdg~~~~va~~~~~~v~v~d  235 (432)
T d1qksa2         206 ERFLHDGGLDGSHRYFITAANARNKLVVID  235 (432)
T ss_dssp             CSSEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred             cCccccceECCCCCEEEEeccccceEEEee
Confidence            45678899999999877666544 555543

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.67  E-value=2.1e-15  Score=109.18  Aligned_cols=141  Identities=13%  Similarity=0.122  Sum_probs=109.6

Q ss_pred             CEEEEEeCCCeEEEEEcCCCeeeeEecCC--CCCeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCeeeEEeecc---eE
Q psy15417         33 RTFVSGACDASAKLWDIRDGSCKQTFPGH--ESDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQELAMYSHDN---II  106 (176)
Q Consensus        33 ~~l~s~s~dg~v~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~---~~  106 (176)
                      .++++++.|++|++||+++++.+.+++.+  ...+.+++|+|||+++ ++++.++.|.+||+.+++.+.......   ..
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            47999999999999999999999988754  3567899999999876 566788999999999887765443211   12


Q ss_pred             eceEEEEECCCCcEEEEEc------------CCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417        107 CGITSVAFSRSGRLLLAGY------------DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus       107 ~~v~~~~~~~~~~~l~~g~------------~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      ..+..++|+|++..++++.            .+..+.+||..+.+....+..+ ..+..++|+|++.++++++.+  +.+
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~--~~~  158 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKLYGLGRD--LHV  158 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCEEEESSS--EEE
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecccc-CCceEEEEcCCCCEEEEEcCC--cce
Confidence            2345689999999887765            4567889998888887777644 456788999999999888765  444


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      ||
T Consensus       159 ~d  160 (337)
T d1pbyb_         159 MD  160 (337)
T ss_dssp             EE
T ss_pred             ee
Confidence            53

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.64  E-value=4.4e-14  Score=100.73  Aligned_cols=137  Identities=16%  Similarity=0.241  Sum_probs=108.0

Q ss_pred             EEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEE
Q psy15417         35 FVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQELAMYSHDNIICGITSVA  113 (176)
Q Consensus        35 l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~  113 (176)
                      +++.+.|++|.+||+++++.+.+++.. ..+.+++|+|+|+++ ++++.++.|++||+.+.+.+..+....   .+..+.
T Consensus         5 yV~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~---~~~~~~   80 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS---SPQGVA   80 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS---SEEEEE
T ss_pred             EEEECCCCEEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc---cccccc
Confidence            456788999999999999999988754 457899999999876 567788999999999887766654332   346788


Q ss_pred             ECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEE-EccCCCcEEEeC
Q psy15417        114 FSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVA-TGSWDSFLRIWN  176 (176)
Q Consensus       114 ~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-tg~~d~~v~vwd  176 (176)
                      +++++..+ +++..++.+.+|+...++....+..+ ....+++++|++..++ ++..++.+.+|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~  144 (301)
T d1l0qa2          81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVIN  144 (301)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             cccccccccccccccceeeecccccceeeeecccc-ccceEEEeecCCCeeeeeeccccceeeee
Confidence            99998754 56778889999998888877777654 4557889999998764 666677788774

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.62  E-value=6.9e-15  Score=106.73  Aligned_cols=148  Identities=10%  Similarity=0.070  Sum_probs=105.8

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCeeeEEeec
Q psy15417         26 LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQELAMYSHD  103 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~  103 (176)
                      ++|++++++|++++.+++|.+||+++++.+.+++. +...+.+++|+|||+++ ++++.++.|.+||+.+++.+......
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            46789999999999999999999999999998874 45678899999999876 55667899999999988776544321


Q ss_pred             c----eEeceEEEEECCCCcEEEEEc------------CCCeEEEEeCCCceeeeeecCC--CccEEEEEEeCCCCEEEE
Q psy15417        104 N----IICGITSVAFSRSGRLLLAGY------------DDFNCNVWDSMKTERAGILAGH--DNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus       104 ~----~~~~v~~~~~~~~~~~l~~g~------------~d~~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~t  165 (176)
                      .    ....+..++|+|||+.++++.            .+..+.+|+..+++....+..+  ...+..+.+++++..+++
T Consensus        82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (346)
T d1jmxb_          82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA  161 (346)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE
T ss_pred             ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEe
Confidence            1    112345688999999887654            4677888987766544333222  223444566777766655


Q ss_pred             ccCCCcEEEeC
Q psy15417        166 GSWDSFLRIWN  176 (176)
Q Consensus       166 g~~d~~v~vwd  176 (176)
                      ++   .+.+||
T Consensus       162 ~~---~~~~~~  169 (346)
T d1jmxb_         162 GP---DIYKMD  169 (346)
T ss_dssp             SS---SEEEEC
T ss_pred             CC---cceEEE
Confidence            42   355553

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.60  E-value=1.7e-14  Score=104.65  Aligned_cols=170  Identities=12%  Similarity=0.029  Sum_probs=110.1

Q ss_pred             cccccccCCCcccCCCccCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCC------CCeeEEEEccCCcE
Q psy15417          4 HLDKSALLGSPAASGHTGDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHE------SDINAVTFFPNGWA   76 (176)
Q Consensus         4 ~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~------~~v~~v~~~~~~~~   76 (176)
                      ++++..++.+.... |...+.+++|+||++++ ++++.++.|.+||+.+++....+....      ..+..++|+|+|+.
T Consensus        24 D~~t~~~~~t~~~~-~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~  102 (346)
T d1jmxb_          24 DVASDTVYKSCVMP-DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE  102 (346)
T ss_dssp             ETTTTEEEEEEECS-SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE
T ss_pred             ECCCCCEEEEEEcC-CCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCE
Confidence            44555554433332 44556799999999976 566678999999999998877665432      23567899999887


Q ss_pred             EEEee------------CCCcEEEeeCCCCC-----------------------------------------eeeEEeec
Q psy15417         77 FATGS------------DDATCRLFDIRADQ-----------------------------------------ELAMYSHD  103 (176)
Q Consensus        77 l~s~s------------~d~~i~iwd~~~~~-----------------------------------------~~~~~~~~  103 (176)
                      ++.++            .+..+.+|+..+++                                         ........
T Consensus       103 l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (346)
T d1jmxb_         103 VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLR  182 (346)
T ss_dssp             EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECST
T ss_pred             EEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeCCcceEEEccCCCEEEEEecC
Confidence            76654            34455555543211                                         11000000


Q ss_pred             c------------------------------------------------------------------eEeceEEEEECCC
Q psy15417        104 N------------------------------------------------------------------IICGITSVAFSRS  117 (176)
Q Consensus       104 ~------------------------------------------------------------------~~~~v~~~~~~~~  117 (176)
                      .                                                                  ....+..+.++++
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (346)
T d1jmxb_         183 NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPK  262 (346)
T ss_dssp             TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSS
T ss_pred             CCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCC
Confidence            0                                                                  0001223444555


Q ss_pred             CcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        118 GRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       118 ~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      +..++... ++.+++||..+++.+..+. +...+.+++|+|||.+|++++.|+.|++||
T Consensus       263 ~~~~~~~~-~~~v~v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v~D  319 (346)
T d1jmxb_         263 DPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFN  319 (346)
T ss_dssp             CTTEEEEE-ESEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEE
T ss_pred             CCEEEEec-CCeEEEEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence            54444443 3478999988888777664 345678999999999999999999999997

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=2.4e-14  Score=103.66  Aligned_cols=142  Identities=8%  Similarity=0.164  Sum_probs=98.0

Q ss_pred             EEEEEeCCCeEEEEEcCCCeeeeEe--cCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCCCCCeee-EEeecceEece
Q psy15417         34 TFVSGACDASAKLWDIRDGSCKQTF--PGHESDINAVTFFPNGWAFATGS-DDATCRLFDIRADQELA-MYSHDNIICGI  109 (176)
Q Consensus        34 ~l~s~s~dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~-~~~~~~~~~~v  109 (176)
                      .+++++.|++|++|++++......+  ..|.+.+.+++|+|||++|++++ .|+.|++|++....... ..........+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p   85 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL   85 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence            4578889999999999765332222  24778899999999999885555 58999999987654332 22222222234


Q ss_pred             EEEEECCCCcEEEEEc-CCCeEEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEccCC-CcEEEe
Q psy15417        110 TSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATGSWD-SFLRIW  175 (176)
Q Consensus       110 ~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg~~d-~~v~vw  175 (176)
                      ..++|+|||++++++. .++.+.+|+........  ....+...+.++.++|++.+++.++.+ ..+.+|
T Consensus        86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~  155 (333)
T d1ri6a_          86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLF  155 (333)
T ss_dssp             SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred             eEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEE
Confidence            5699999999887766 57789998866544332  333455667788999999987766543 456665

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.49  E-value=2.4e-12  Score=94.66  Aligned_cols=155  Identities=14%  Similarity=-0.039  Sum_probs=112.5

Q ss_pred             cCCCccCeEEEEEcCCCCEEEEE-----eCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee---------
Q psy15417         16 ASGHTGDVMSLSLAPDMRTFVSG-----ACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS---------   81 (176)
Q Consensus        16 ~~gh~~~V~~~~~~~~~~~l~s~-----s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s---------   81 (176)
                      ..++.+++..++++||++.++..     +..+.|.+||..+++.+.++..+..+  .+.|+|||+++++++         
T Consensus        16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~   93 (373)
T d2madh_          16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKG   93 (373)
T ss_pred             cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCccccc
Confidence            45688999999999999988664     23467999999999999888876644  799999999988875         


Q ss_pred             -CCCcEEEeeCCCCCeeeEEeecceE-----eceEEEEECCCCcEEEEE--cCCCeEEEEeCCCceeeeeecCCCccEEE
Q psy15417         82 -DDATCRLFDIRADQELAMYSHDNII-----CGITSVAFSRSGRLLLAG--YDDFNCNVWDSMKTERAGILAGHDNRVSC  153 (176)
Q Consensus        82 -~d~~i~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~g--~~d~~i~v~d~~~~~~~~~~~~~~~~i~~  153 (176)
                       .++.|.+||..+.+...........     .....+.|++++..++..  ..+..+.+|+....+.....    ....+
T Consensus        94 ~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  169 (373)
T d2madh_          94 KRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLL----SSPTC  169 (373)
T ss_pred             ccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEe----cccee
Confidence             4578999999988776544322110     112346788888765443  34567888887665554433    33457


Q ss_pred             EEEeCCCCE-EEEccCCCcEEEeC
Q psy15417        154 LGVTEDGMA-VATGSWDSFLRIWN  176 (176)
Q Consensus       154 ~~~~~~~~~-l~tg~~d~~v~vwd  176 (176)
                      +.++|++.. +++.+.|+.+.+||
T Consensus       170 ~~~s~~g~~~~v~~~~dg~~~~~~  193 (373)
T d2madh_         170 YHIHPGAPSTFYLLCAQGGLAKTD  193 (373)
T ss_pred             EEEecCCCcEEEEEcCCCeEEEEE
Confidence            789998765 46888899999885

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=9.9e-13  Score=94.94  Aligned_cols=159  Identities=12%  Similarity=0.108  Sum_probs=106.1

Q ss_pred             CCCccCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCeeeeEec---CCCCCeeEEEEccCCcEEEEeeC-CCcEEEeeC
Q psy15417         17 SGHTGDVMSLSLAPDMRTFVSG-ACDASAKLWDIRDGSCKQTFP---GHESDINAVTFFPNGWAFATGSD-DATCRLFDI   91 (176)
Q Consensus        17 ~gh~~~V~~~~~~~~~~~l~s~-s~dg~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~~~~~~l~s~s~-d~~i~iwd~   91 (176)
                      ..|.+.|..++|+|||++|+++ ..|+.|++|++.......++.   .+...+..++|+|+|+++++++. ++.+.+|+.
T Consensus        33 ~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~  112 (333)
T d1ri6a_          33 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRL  112 (333)
T ss_dssp             EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             EcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeecc
Confidence            3577889999999999988554 458999999997654332222   23455778999999999888875 668999987


Q ss_pred             CCCCeeeEEeecceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCCceeee------eecCCCccEEEEEEeCCCCEEE
Q psy15417         92 RADQELAMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAG------ILAGHDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~~~~------~~~~~~~~i~~~~~~~~~~~l~  164 (176)
                      .................+.++.++|+++.++.+. .+..+.+|+........      ...........++|++++.++.
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~  192 (333)
T d1ri6a_         113 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY  192 (333)
T ss_dssp             ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred             ccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEE
Confidence            6554443333322223466788999998776654 55678999865532211      1122334567889999988765


Q ss_pred             Ec-cCCCcEEEe
Q psy15417        165 TG-SWDSFLRIW  175 (176)
Q Consensus       165 tg-~~d~~v~vw  175 (176)
                      .. ...+...+|
T Consensus       193 ~~~~~~~~~~v~  204 (333)
T d1ri6a_         193 CVNELNSSVDVW  204 (333)
T ss_dssp             EEETTTTEEEEE
T ss_pred             eeccccCceEEE
Confidence            44 334444443

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.31  E-value=4e-10  Score=82.46  Aligned_cols=157  Identities=14%  Similarity=0.079  Sum_probs=105.4

Q ss_pred             CCccCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCeeeeEecCCC------CCeeEEEEccCCcEEEEeeCCCcEEEee
Q psy15417         18 GHTGDVMSLSLAPDMR-TFVSGACDASAKLWDIRDGSCKQTFPGHE------SDINAVTFFPNGWAFATGSDDATCRLFD   90 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~-~l~s~s~dg~v~~wd~~~~~~~~~~~~h~------~~v~~v~~~~~~~~l~s~s~d~~i~iwd   90 (176)
                      +|.....++.|+|+++ .+++.+.|+++.+|+...++.......+.      .......+.+++ .++..+.++.+.+|+
T Consensus       162 ~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~  240 (373)
T d2madh_         162 QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG-RIVWPVYSGKILQAD  240 (373)
T ss_pred             EEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCc-eEEEecCCceEEEEE
Confidence            3445567888999886 55788999999999999887666554322      112334455555 455666888999999


Q ss_pred             CCCCCeeeEEeecce----------EeceEEEEECCCCcE----------EEEEcCCCeEEEEeCCCceeeeeecCCCcc
Q psy15417         91 IRADQELAMYSHDNI----------ICGITSVAFSRSGRL----------LLAGYDDFNCNVWDSMKTERAGILAGHDNR  150 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~----------l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~  150 (176)
                      ...............          ......+.+++++..          ++....++.+.+||..+++....+. +...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~  319 (373)
T d2madh_         241 ISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHD  319 (373)
T ss_pred             cCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCC
Confidence            876543222111100          011233455555543          3445666789999998888877664 5566


Q ss_pred             EEEEEEeCCCC--EEEEccCCCcEEEeC
Q psy15417        151 VSCLGVTEDGM--AVATGSWDSFLRIWN  176 (176)
Q Consensus       151 i~~~~~~~~~~--~l~tg~~d~~v~vwd  176 (176)
                      +..++|+|||+  ++++++.|++|+|||
T Consensus       320 ~~~~a~spDG~~~l~vt~~~d~~v~v~D  347 (373)
T d2madh_         320 VDAISVAQDGGPDLYALSAGTEVLHIYD  347 (373)
T ss_pred             eeEEEECCCCCEEEEEEeCCCCeEEEEE
Confidence            88999999998  457899999999997

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.29  E-value=2.6e-11  Score=89.45  Aligned_cols=71  Identities=3%  Similarity=-0.092  Sum_probs=55.0

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCeeeeEecCCCC-------CeeEEEEccCCcEEEEee-CCCcE
Q psy15417         25 SLSLAPDMRTFVSGA----------CDASAKLWDIRDGSCKQTFPGHES-------DINAVTFFPNGWAFATGS-DDATC   86 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s----------~dg~v~~wd~~~~~~~~~~~~h~~-------~v~~v~~~~~~~~l~s~s-~d~~i   86 (176)
                      .+.|+||++.++..+          .|++|.+||..+++....+..+..       ....++|+|||++++.+. .++.+
T Consensus        69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v  148 (368)
T d1mdah_          69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeE
Confidence            478999999888754          477899999999988877754322       234689999999887775 56899


Q ss_pred             EEeeCCCCC
Q psy15417         87 RLFDIRADQ   95 (176)
Q Consensus        87 ~iwd~~~~~   95 (176)
                      .+||+.+.+
T Consensus       149 ~~~d~~~~~  157 (368)
T d1mdah_         149 AGLSVPGAS  157 (368)
T ss_dssp             EEEEETTTE
T ss_pred             EEEECCCCc
Confidence            999976543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.28  E-value=1.6e-11  Score=93.43  Aligned_cols=141  Identities=16%  Similarity=0.100  Sum_probs=101.5

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec-----CCCCCeeEEEEccCCcEEEEeeC---------CCcEEEee
Q psy15417         25 SLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP-----GHESDINAVTFFPNGWAFATGSD---------DATCRLFD   90 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~-----~h~~~v~~v~~~~~~~~l~s~s~---------d~~i~iwd   90 (176)
                      .+.|.+++.++..  .++.+.+||+.+++....+.     .|...|.++.|+||+++|+.++.         ++.+.+||
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            4779999887764  47889999999998765444     45578999999999999888754         45678999


Q ss_pred             CCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCC------------------CccEE
Q psy15417         91 IRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGH------------------DNRVS  152 (176)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~------------------~~~i~  152 (176)
                      +.+++......   ....+..+.|+|||..++.. .+..+.+|+...++.......+                  .+...
T Consensus        99 ~~~~~~~~l~~---~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~  174 (470)
T d2bgra1          99 LNKRQLITEER---IPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS  174 (470)
T ss_dssp             TTTTEECCSSC---CCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred             CCCCccccccc---CCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCcc
Confidence            98765432222   22356789999999988875 4668999998776544432211                  12234


Q ss_pred             EEEEeCCCCEEEEccCCCc
Q psy15417        153 CLGVTEDGMAVATGSWDSF  171 (176)
Q Consensus       153 ~~~~~~~~~~l~tg~~d~~  171 (176)
                      .+.|+|+|+.|+....|.+
T Consensus       175 ~~~wSPDGk~ia~~~~d~~  193 (470)
T d2bgra1         175 ALWWSPNGTFLAYAQFNDT  193 (470)
T ss_dssp             CEEECTTSSEEEEEEEECT
T ss_pred             ccEECCCCCccceeEecCC
Confidence            5679999999998766543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.24  E-value=3.6e-11  Score=87.49  Aligned_cols=152  Identities=16%  Similarity=0.122  Sum_probs=101.4

Q ss_pred             EEEEEcCCCCEEEEEe--CCCeEEEEEcCCCeeeeEecCCC---------------------------------------
Q psy15417         24 MSLSLAPDMRTFVSGA--CDASAKLWDIRDGSCKQTFPGHE---------------------------------------   62 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s--~dg~v~~wd~~~~~~~~~~~~h~---------------------------------------   62 (176)
                      ..+.|+++++.++.++  .+..+.+|+..+++....+..+.                                       
T Consensus       109 ~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~  188 (355)
T d2bbkh_         109 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEV  188 (355)
T ss_dssp             GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCC
T ss_pred             ceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEeccc
Confidence            4578999999887765  45678899998887655443221                                       


Q ss_pred             ------CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec----------ceEeceEEEEECCCCcEEEEEcC
Q psy15417         63 ------SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD----------NIICGITSVAFSRSGRLLLAGYD  126 (176)
Q Consensus        63 ------~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~g~~  126 (176)
                            ..+....+.+++..++.++.++.+.+|++..+.........          ........+++++++..++....
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~  268 (355)
T d2bbkh_         189 FHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVD  268 (355)
T ss_dssp             CSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEE
T ss_pred             ccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEec
Confidence                  11223345555566777788888888887765432111110          00112235788899887766433


Q ss_pred             C----------CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCC--EEEEccCCCcEEEeC
Q psy15417        127 D----------FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGM--AVATGSWDSFLRIWN  176 (176)
Q Consensus       127 d----------~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~tg~~d~~v~vwd  176 (176)
                      +          ..+.+||..+++.+..+. +...+.+++|+|+|+  ++++++.|+.|++||
T Consensus       269 ~~~~~~~~~~~~~v~v~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D  329 (355)
T d2bbkh_         269 QRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHD  329 (355)
T ss_dssp             ECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred             cCCceeecCCCCeEEEEeCCCCcEEEEec-CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEE
Confidence            2          368999998888777665 335578899999987  467888899999997

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.22  E-value=4.3e-11  Score=87.07  Aligned_cols=137  Identities=12%  Similarity=0.090  Sum_probs=96.9

Q ss_pred             CccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeee--eEecCC----------CCCeeEEEEccCCcEEEEeeCC---
Q psy15417         19 HTGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCK--QTFPGH----------ESDINAVTFFPNGWAFATGSDD---   83 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~--~~~~~h----------~~~v~~v~~~~~~~~l~s~s~d---   83 (176)
                      +...+....+.+++..++.++.++.+.+|++..++..  .....+          ......+++++++..++..+.+   
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~  272 (355)
T d2bbkh_         193 DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDE  272 (355)
T ss_dssp             TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCT
T ss_pred             ecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCc
Confidence            4444556678888888999999999999999877532  222222          1223458888988877665443   


Q ss_pred             -------CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCc--EEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEE
Q psy15417         84 -------ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR--LLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCL  154 (176)
Q Consensus        84 -------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~  154 (176)
                             ..+.+||..+.+.+......   ..+.+++|+|||+  +++++..+++|++||.++++.+.++..+...-.++
T Consensus       273 ~~~~~~~~~v~v~d~~t~~~~~~~~~~---~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i  349 (355)
T d2bbkh_         273 WRHKTASRFVVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVI  349 (355)
T ss_dssp             TCTTSCEEEEEEEETTTCCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEE
T ss_pred             eeecCCCCeEEEEeCCCCcEEEEecCC---CCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEE
Confidence                   36899999988776655443   2356799999997  45677889999999999999888887654433444


Q ss_pred             EEeC
Q psy15417        155 GVTE  158 (176)
Q Consensus       155 ~~~~  158 (176)
                      .+.+
T Consensus       350 ~~~d  353 (355)
T d2bbkh_         350 TTAD  353 (355)
T ss_dssp             ECCC
T ss_pred             EeCC
Confidence            4443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.02  E-value=1.1e-09  Score=80.47  Aligned_cols=129  Identities=11%  Similarity=-0.059  Sum_probs=90.7

Q ss_pred             CCccCeEEEEEcCCCCEE---EEEeCCCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEee----------C
Q psy15417         18 GHTGDVMSLSLAPDMRTF---VSGACDAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGS----------D   82 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l---~s~s~dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s----------~   82 (176)
                      .+.++...++..++++..   +....+++  +.+||..+++.+.++..+..+  .++|+|+++.++..+          .
T Consensus        17 ~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~   94 (368)
T d1mdah_          17 ASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKR   94 (368)
T ss_dssp             CCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSE
T ss_pred             ccCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCcccccccc
Confidence            345555556667777742   33444555  667799999988888876654  589999999887754          4


Q ss_pred             CCcEEEeeCCCCCeeeEEeecceE-----eceEEEEECCCCcEEEEEc-CCCeEEEEeCCCceeeeeecCCC
Q psy15417         83 DATCRLFDIRADQELAMYSHDNII-----CGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGHD  148 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~~  148 (176)
                      |+.|++||..+.+.+.........     .....++|+|||++++++. .++.+.+||+.+.+....+..+.
T Consensus        95 d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~  166 (368)
T d1mdah_          95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSAS  166 (368)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSS
T ss_pred             CCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccC
Confidence            678999999888776655422110     1123588999999887664 67899999999988877765543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.00  E-value=1.9e-07  Score=66.08  Aligned_cols=153  Identities=18%  Similarity=0.218  Sum_probs=109.2

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCee
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQEL   97 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~   97 (176)
                      ......+++.+++.++++....+.+.+++.+ ++.+.++.  .+......+++.++++.+++....+.|.++|.. ++.+
T Consensus       113 ~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-G~~~  190 (279)
T d1q7fa_         113 LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYL  190 (279)
T ss_dssp             CSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEE
T ss_pred             ccccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccccceeeeecC-Ccee
Confidence            3455678888888888887777778888864 45555553  345667889999999999998888999999964 4444


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCCceeeeeecCC--CccEEEEEEeCCCCEEEEccCCCcEEE
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMKTERAGILAGH--DNRVSCLGVTEDGMAVATGSWDSFLRI  174 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~tg~~d~~v~v  174 (176)
                      ..+...........+++.++++++++-. .++.+.+|+ ..++.+..+...  ......+++.++|.++++ ..+++|++
T Consensus       191 ~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~-~~n~~v~~  268 (279)
T d1q7fa_         191 RQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYI  268 (279)
T ss_dssp             EEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEE
T ss_pred             eeecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEE-eCCCeEEE
Confidence            4443322222345789999999887754 455799998 467766555332  235678999999876554 57889999


Q ss_pred             eC
Q psy15417        175 WN  176 (176)
Q Consensus       175 wd  176 (176)
                      |.
T Consensus       269 fr  270 (279)
T d1q7fa_         269 YR  270 (279)
T ss_dssp             EE
T ss_pred             EE
Confidence            83

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.97  E-value=2.3e-08  Score=75.40  Aligned_cols=154  Identities=9%  Similarity=-0.024  Sum_probs=100.8

Q ss_pred             CccCeEEEEEcCCCCEEEE-EeCCCeEEEEEcCCCeeeeEecC-CCCCeeEEEEccCCc--EEEEeeCCCc---------
Q psy15417         19 HTGDVMSLSLAPDMRTFVS-GACDASAKLWDIRDGSCKQTFPG-HESDINAVTFFPNGW--AFATGSDDAT---------   85 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s-~s~dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~--~l~s~s~d~~---------   85 (176)
                      |.-......++|||++|+. ...+..|.++|+++.++...+.- +.....+++|+|+++  +++..+.+..         
T Consensus        70 hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~  149 (441)
T d1qnia2          70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDF  149 (441)
T ss_dssp             CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCC
T ss_pred             cCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCccccc
Confidence            5555566667899997754 45788899999999988776653 456788999999987  4444444321         


Q ss_pred             --------EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC------------------------------
Q psy15417         86 --------CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD------------------------------  127 (176)
Q Consensus        86 --------i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d------------------------------  127 (176)
                              +..+|..+.+.........   .+..+.++|+|.++++.+.+                              
T Consensus       150 ~~~~~~~~~~~iD~~t~~v~~qI~v~~---~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~  226 (441)
T d1qnia2         150 SLDNSYTMFTAIDAETMDVAWQVIVDG---NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAV  226 (441)
T ss_dssp             CGGGEEEEEEEEETTTCSEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHH
T ss_pred             ccccccceEEeecCccceeeEEEecCC---CccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEe
Confidence                    2335555444333322222   24568899999988776533                              


Q ss_pred             -----------CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEEeC
Q psy15417        128 -----------FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIWN  176 (176)
Q Consensus       128 -----------~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vwd  176 (176)
                                 +.+.+++....+.+..++....+ ..++++|+|+++ +++..+++|.|||
T Consensus       227 ~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgksP-hGv~vSPDGkyl~~~~~~~~tvsv~d  286 (441)
T d1qnia2         227 KAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNP-HGLNTSPDGKYFIANGKLSPTVSVIA  286 (441)
T ss_dssp             HTTCCBCCTTCCCCEEECSSSCSSEEEECCBSSC-CCEEECTTSCEEEEECTTSSBEEEEE
T ss_pred             cCCCEEEeCCCCcEEEEcccCCceEEEEeCCCCc-cCceECCCCCEEEEeCCcCCcEEEEE
Confidence                       23344443344445555544333 568899999986 6788899999996

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.96  E-value=1.1e-09  Score=83.10  Aligned_cols=116  Identities=14%  Similarity=0.098  Sum_probs=85.6

Q ss_pred             cCCCcccCCCccCeEEEEEcCCCCEEEEEeC---------CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEe
Q psy15417         10 LLGSPAASGHTGDVMSLSLAPDMRTFVSGAC---------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATG   80 (176)
Q Consensus        10 ~~~~~~~~gh~~~V~~~~~~~~~~~l~s~s~---------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~   80 (176)
                      ++....+.+|...|.+..||||+++|+.++.         ++.+.+||+.+++ ...+..+...+..+.|+|+|+.++..
T Consensus        51 ~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~  129 (470)
T d2bgra1          51 FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHKLAYV  129 (470)
T ss_dssp             EECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTCEEEE
T ss_pred             EEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccCCccccccccccCcceeeEe
Confidence            3444566778889999999999999988753         5678899999987 45677888999999999999998886


Q ss_pred             eCCCcEEEeeCCCCCeeeEEeec--c--------------eEeceEEEEECCCCcEEEEEcCC
Q psy15417         81 SDDATCRLFDIRADQELAMYSHD--N--------------IICGITSVAFSRSGRLLLAGYDD  127 (176)
Q Consensus        81 s~d~~i~iwd~~~~~~~~~~~~~--~--------------~~~~v~~~~~~~~~~~l~~g~~d  127 (176)
                       .++.+.+|+..+++........  .              .......+.|+|||+.++....|
T Consensus       130 -~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d  191 (470)
T d2bgra1         130 -WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN  191 (470)
T ss_dssp             -ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred             -ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEec
Confidence             4678999998876654321110  0              00113457799999988776543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.90  E-value=3.7e-07  Score=67.12  Aligned_cols=155  Identities=11%  Similarity=0.098  Sum_probs=95.4

Q ss_pred             CeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCC-eee--eEe--cCCCCCeeEEEEccCCcEEEEee-CCCcEEEeeCCCC
Q psy15417         22 DVMSLSLAPDMRTFVSGAC-DASAKLWDIRDG-SCK--QTF--PGHESDINAVTFFPNGWAFATGS-DDATCRLFDIRAD   94 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~-dg~v~~wd~~~~-~~~--~~~--~~h~~~v~~v~~~~~~~~l~s~s-~d~~i~iwd~~~~   94 (176)
                      .+.++.|+|+++++++++. ...|.+|+.... +..  ...  .......+.+.|+|++++++... .+++|.+|++...
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~  225 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA  225 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCC
Confidence            4779999999998887764 346888876533 221  122  22345689999999998875555 5688999998655


Q ss_pred             CeeeEEeecc-----------------eEeceEEEEECCCCcEEEEEcC------CCeEEEEeCCCceee----e--eec
Q psy15417         95 QELAMYSHDN-----------------IICGITSVAFSRSGRLLLAGYD------DFNCNVWDSMKTERA----G--ILA  145 (176)
Q Consensus        95 ~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~l~~g~~------d~~i~v~d~~~~~~~----~--~~~  145 (176)
                      ..........                 .......+.++|+|++++++..      ...|..|++.....+    .  ...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~  305 (365)
T d1jofa_         226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP  305 (365)
T ss_dssp             TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred             CceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEE
Confidence            4322211100                 0012456889999998877532      223666665432111    1  111


Q ss_pred             CCCccEEEEEEeC-CCCEEE-EccCCCcEEEeC
Q psy15417        146 GHDNRVSCLGVTE-DGMAVA-TGSWDSFLRIWN  176 (176)
Q Consensus       146 ~~~~~i~~~~~~~-~~~~l~-tg~~d~~v~vwd  176 (176)
                      .....-..++++| +|++|+ +...++.|.+|+
T Consensus       306 ~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~  338 (365)
T d1jofa_         306 TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR  338 (365)
T ss_dssp             SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred             cCCCCccEEEecCCCCCEEEEEeCCCCeEEEEE
Confidence            2223446688998 788765 556778899983

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.85  E-value=2.7e-09  Score=80.50  Aligned_cols=148  Identities=15%  Similarity=0.133  Sum_probs=98.1

Q ss_pred             eEEEEEcCCCCEEEEEeCC-----------------------------------------CeEEEEEcCCCeeeeEecCC
Q psy15417         23 VMSLSLAPDMRTFVSGACD-----------------------------------------ASAKLWDIRDGSCKQTFPGH   61 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~d-----------------------------------------g~v~~wd~~~~~~~~~~~~h   61 (176)
                      ...+.|+|+|+++++.+.+                                         +.+.+++....+.+..++..
T Consensus       178 p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvg  257 (441)
T d1qnia2         178 LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVP  257 (441)
T ss_dssp             CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCB
T ss_pred             ccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCC
Confidence            4568899999988777654                                         33445555555566677765


Q ss_pred             CCCeeEEEEccCCcEE-EEeeCCCcEEEeeCCCCCe---------eeEEeecceEeceEEEEECCCCcEEEEEcCCCeEE
Q psy15417         62 ESDINAVTFFPNGWAF-ATGSDDATCRLFDIRADQE---------LAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN  131 (176)
Q Consensus        62 ~~~v~~v~~~~~~~~l-~s~s~d~~i~iwd~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~  131 (176)
                      .+ ..++.++|||+++ +++..++++.+||+.+.+.         ..........-+..-.+|.++|..+.+.+.|.++.
T Consensus       258 ks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~  336 (441)
T d1qnia2         258 KN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVC  336 (441)
T ss_dssp             SS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred             CC-ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEE
Confidence            44 5779999999976 5667789999999754221         01111111111234568999999999999999999


Q ss_pred             EEeCCC---------c-eeeeee-----cCCCccEEEEEEeCCCCEEEEc---cCCCc
Q psy15417        132 VWDSMK---------T-ERAGIL-----AGHDNRVSCLGVTEDGMAVATG---SWDSF  171 (176)
Q Consensus       132 v~d~~~---------~-~~~~~~-----~~~~~~i~~~~~~~~~~~l~tg---~~d~~  171 (176)
                      .|++..         . .....+     .+|...+.+.+++|+|++|+++   |.|+.
T Consensus       337 kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~  394 (441)
T d1qnia2         337 KWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRF  394 (441)
T ss_dssp             EEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGS
T ss_pred             EeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCccccccC
Confidence            999631         1 122233     4555545556688999999999   55654

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.82  E-value=7.9e-07  Score=63.46  Aligned_cols=114  Identities=15%  Similarity=0.072  Sum_probs=81.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCe-eeEE
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQE-LAMY  100 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~-~~~~  100 (176)
                      .+..++++|||+++++...+++|..|+... + ...+......+.+++|.|+|+.+++...++.+..++...... ....
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~  106 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDG-N-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL  106 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTC-C-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCC-C-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeec
Confidence            477899999999999999999998888653 3 334445667899999999999999988888888887643322 1111


Q ss_pred             eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCC
Q psy15417        101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMK  137 (176)
Q Consensus       101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~  137 (176)
                      .........+.+.+.++++++++-..++.+..++...
T Consensus       107 ~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~  143 (302)
T d2p4oa1         107 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ  143 (302)
T ss_dssp             EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred             cccCCccccceeEEccCCCEEeeccccccceeeeccC
Confidence            1111112356778888888888777777776666443

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.78  E-value=1e-06  Score=61.51  Aligned_cols=154  Identities=9%  Similarity=0.033  Sum_probs=102.9

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMY  100 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~  100 (176)
                      ....++++++++.++++-..+..+..++............-.....++++.|+++.+++...++.|..++....... ..
T Consensus        98 ~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~-~~  176 (260)
T d1rwia_          98 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-VL  176 (260)
T ss_dssp             CSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEE-EC
T ss_pred             eecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceee-ee
Confidence            45678999999888777666666777776543322211112245678999999998888888888999987654332 22


Q ss_pred             eecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        101 SHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       101 ~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      ..... .....+++.+++.++++-...+.+..++...................+++.++|..+++-..+++|+.++
T Consensus       177 ~~~~~-~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~  251 (260)
T d1rwia_         177 PFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT  251 (260)
T ss_dssp             CCSSC-CSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred             ecccc-CCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEe
Confidence            21111 2346789999999999988889998887544322222122234457899999998888766777777653

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.74  E-value=6.6e-06  Score=57.89  Aligned_cols=152  Identities=13%  Similarity=0.173  Sum_probs=89.7

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC----------------------------------------
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH----------------------------------------   61 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h----------------------------------------   61 (176)
                      .-..+++++++.++++-..+..|++||.+ ++.+..+...                                        
T Consensus        24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g  102 (279)
T d1q7fa_          24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG  102 (279)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS
T ss_pred             CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccccc
Confidence            45688888888888777777788888854 4433333210                                        


Q ss_pred             ----------CCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEE
Q psy15417         62 ----------ESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCN  131 (176)
Q Consensus        62 ----------~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~  131 (176)
                                .....++++.+++..+++....+.+.+++. +++.+..+...........+++.+++.++++....+.|+
T Consensus       103 ~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~  181 (279)
T d1q7fa_         103 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK  181 (279)
T ss_dssp             CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred             cceeecCCCcccccceeccccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEeeecccccee
Confidence                      111223334344443333333333333332 222222222222223356788889999999988999999


Q ss_pred             EEeCCCceeeeeec--CCCccEEEEEEeCCCCEEEEccC-CCcEEEeC
Q psy15417        132 VWDSMKTERAGILA--GHDNRVSCLGVTEDGMAVATGSW-DSFLRIWN  176 (176)
Q Consensus       132 v~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~tg~~-d~~v~vwd  176 (176)
                      +||. .++.+..+.  +.......+++.++|+.+++-.. ++.|.+|+
T Consensus       182 ~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~  228 (279)
T d1q7fa_         182 VFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT  228 (279)
T ss_dssp             EEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred             eeec-CCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC
Confidence            9994 555555553  34445678999999988776543 44688875

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.70  E-value=1.1e-06  Score=61.29  Aligned_cols=150  Identities=10%  Similarity=0.072  Sum_probs=101.6

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEee
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSH  102 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~  102 (176)
                      ...+++++++.++++....+.+++++-.+........+ .....++++.++++.+++-.....+..++...... .....
T Consensus        59 p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~~-~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~-~~~~~  136 (260)
T d1rwia_          59 PQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDG-LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-TVLPF  136 (260)
T ss_dssp             CCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCS-CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC-EECCC
T ss_pred             ceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeeeee-eeecccccccccceeEeecccccccccccccccee-eeeee
Confidence            45788999999888877777677666555443333322 24578999999998877766666677766544322 22221


Q ss_pred             cceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        103 DNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       103 ~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      ... .....+++.+++.++++...++.+..++...................+++.++|.++++....+.|..+
T Consensus       137 ~~~-~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~  208 (260)
T d1rwia_         137 TGL-NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKL  208 (260)
T ss_dssp             CSC-CSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred             ccc-CCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEE
Confidence            111 234578899999998888888999999966544333333444556789999999888888878777655

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.65  E-value=6.1e-06  Score=59.33  Aligned_cols=153  Identities=10%  Similarity=0.089  Sum_probs=96.3

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC----CcEEEeeCCCCCee
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD----ATCRLFDIRADQEL   97 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~~~~~~~   97 (176)
                      ....+.|+++|.+.++-...+.|.-|+..+++....+........++++.++|+.+++...+    +.+...+.......
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~  120 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ  120 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceee
Confidence            34688999999988887788999999988776666665566678999999999887776433    22333444433332


Q ss_pred             eEEeecceEeceEEEEECCCCcEEEEEcCC------CeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCC
Q psy15417         98 AMYSHDNIICGITSVAFSRSGRLLLAGYDD------FNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDS  170 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d------~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~  170 (176)
                      ............+.+.+.++|+++++....      +.+..++.... ....+......-+.++|+|+++.| ++-+..+
T Consensus       121 ~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~-~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~  199 (319)
T d2dg1a1         121 DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTPIIQNISVANGIALSTDEKVLWVTETTAN  199 (319)
T ss_dssp             EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-CEEEEEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred             eeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccc-eeEEEeeccceeeeeeeccccceEEEecccCC
Confidence            222222222356788999999987764321      23545553322 222222222334678999998754 5556667


Q ss_pred             cEEEe
Q psy15417        171 FLRIW  175 (176)
Q Consensus       171 ~v~vw  175 (176)
                      .|..|
T Consensus       200 ~I~~~  204 (319)
T d2dg1a1         200 RLHRI  204 (319)
T ss_dssp             EEEEE
T ss_pred             ceEEE
Confidence            77665

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.51  E-value=1.5e-05  Score=57.17  Aligned_cols=151  Identities=10%  Similarity=0.047  Sum_probs=96.2

Q ss_pred             eEEEEEcCCCCEEEEEeC---------------CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCc-----EEEEeeC
Q psy15417         23 VMSLSLAPDMRTFVSGAC---------------DASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGW-----AFATGSD   82 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~---------------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-----~l~s~s~   82 (176)
                      .+.+.+.++|.+.++-..               +|.|..++.+ ++..... ..-...+.++|+|++.     .+++-+.
T Consensus       119 pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~-~~~~~pNGi~~~~d~d~~~~~lyv~d~~  196 (314)
T d1pjxa_         119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETP  196 (314)
T ss_dssp             CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETT
T ss_pred             CcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEee-CCcceeeeeEECCCCCcceeEEEEEeec
Confidence            467889999987776432               2234444432 3322222 2223457899998753     4555567


Q ss_pred             CCcEEEeeCCCCCeeeE---Ee-ecc-eEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe
Q psy15417         83 DATCRLFDIRADQELAM---YS-HDN-IICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT  157 (176)
Q Consensus        83 d~~i~iwd~~~~~~~~~---~~-~~~-~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~  157 (176)
                      .+.|..+++..+..+..   +. ... .......+++.++|+++++....+.|.+||.+.++....+........+++|.
T Consensus       197 ~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg  276 (314)
T d1pjxa_         197 TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFK  276 (314)
T ss_dssp             TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEEC
T ss_pred             ccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEe
Confidence            78888888754433321   11 111 01123468899999999988888999999977676666666555678899999


Q ss_pred             CCCC-EEEEccCCCcEEEe
Q psy15417        158 EDGM-AVATGSWDSFLRIW  175 (176)
Q Consensus       158 ~~~~-~l~tg~~d~~v~vw  175 (176)
                      |+++ .++|.+.+++|.-+
T Consensus       277 ~d~~~lyVt~~~~g~i~~~  295 (314)
T d1pjxa_         277 PQTKTIFVTEHENNAVWKF  295 (314)
T ss_dssp             TTSSEEEEEETTTTEEEEE
T ss_pred             CCCCEEEEEECCCCcEEEE
Confidence            9886 55677777777643

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.25  E-value=6.6e-05  Score=53.12  Aligned_cols=117  Identities=14%  Similarity=0.193  Sum_probs=79.5

Q ss_pred             eeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEE
Q psy15417         54 CKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVW  133 (176)
Q Consensus        54 ~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~  133 (176)
                      .+.+++.. ..+.++++.|+|+++++...+++|..|+... .........   ..+..++|+++++++++...++.+..+
T Consensus        20 v~~~~p~~-~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-~~~~~~~~~---~~~~gla~~~dG~l~v~~~~~~~~~~~   94 (302)
T d2p4oa1          20 IITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVE---GKVSGLAFTSNGDLVATGWNADSIPVV   94 (302)
T ss_dssp             EEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECS---SEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             EEEECCCC-CCcCCEEECCCCCEEEEeCCCCEEEEEeCCC-CEEEEEcCC---CCcceEEEcCCCCeEEEecCCceEEEE
Confidence            34445432 2478899999999999999999998888543 332233333   246789999999999998888888777


Q ss_pred             eCCCcee-eeee--cCCCccEEEEEEeCCCCEEEEccCCCcEEEe
Q psy15417        134 DSMKTER-AGIL--AGHDNRVSCLGVTEDGMAVATGSWDSFLRIW  175 (176)
Q Consensus       134 d~~~~~~-~~~~--~~~~~~i~~~~~~~~~~~l~tg~~d~~v~vw  175 (176)
                      +....+. ...+  .........+++.+++.++++-+.++.+..+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~  139 (302)
T d2p4oa1          95 SLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLI  139 (302)
T ss_dssp             EEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred             EecccccceeeccccCCccccceeEEccCCCEEeeccccccceee
Confidence            7433211 1111  1234457888999999888887766665543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.24  E-value=0.00022  Score=48.85  Aligned_cols=65  Identities=15%  Similarity=0.225  Sum_probs=45.7

Q ss_pred             CCccCeEEEEEcCCCCEEEEEeCCC---eEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC
Q psy15417         18 GHTGDVMSLSLAPDMRTFVSGACDA---SAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD   83 (176)
Q Consensus        18 gh~~~V~~~~~~~~~~~l~s~s~dg---~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d   83 (176)
                      .+.+.+...+|||||+.|+-.....   .+.+.+...+.. ..+..+........|+|++..++.....
T Consensus        36 ~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~i~~~~~~  103 (269)
T d2hqsa1          36 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSKLAFALSK  103 (269)
T ss_dssp             EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSSEEEEEECT
T ss_pred             cCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecCCCCeeeEeeec
Confidence            3556778899999999887554433   355666665553 3445567778889999999887766543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.14  E-value=0.00012  Score=53.38  Aligned_cols=155  Identities=8%  Similarity=-0.012  Sum_probs=87.5

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CeeeeEe-cCCCCCeeEEEEccCCcEEE--Eee-CCCcEEEeeCCCC-
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRD-GSCKQTF-PGHESDINAVTFFPNGWAFA--TGS-DDATCRLFDIRAD-   94 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~-~~~~~~~-~~h~~~v~~v~~~~~~~~l~--s~s-~d~~i~iwd~~~~-   94 (176)
                      ..+.-|+|++++++|+++.. +.+..|.+.. +...... .........+.++++++.++  ++. ..+++..+.+... 
T Consensus        40 ~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~  118 (365)
T d1jofa_          40 EPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA  118 (365)
T ss_dssp             CCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred             CCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCC
Confidence            44556999999999988765 5677776653 2222111 11223456778888887433  322 2344544433211 


Q ss_pred             CeeeEEee--------------cceEeceEEEEECCCCcEEEEEc-CCCeEEEEeCCC-cee--eeee--cCCCccEEEE
Q psy15417         95 QELAMYSH--------------DNIICGITSVAFSRSGRLLLAGY-DDFNCNVWDSMK-TER--AGIL--AGHDNRVSCL  154 (176)
Q Consensus        95 ~~~~~~~~--------------~~~~~~v~~~~~~~~~~~l~~g~-~d~~i~v~d~~~-~~~--~~~~--~~~~~~i~~~  154 (176)
                      .....+..              ......+.++.|+|+++++++.. ....+.+|+... +..  ....  .........+
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i  198 (365)
T d1jofa_         119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV  198 (365)
T ss_dssp             CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred             CcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEE
Confidence            11111110              00012357899999999777664 345788886443 221  1111  1233456889


Q ss_pred             EEeCCCCEE-EEccCCCcEEEeC
Q psy15417        155 GVTEDGMAV-ATGSWDSFLRIWN  176 (176)
Q Consensus       155 ~~~~~~~~l-~tg~~d~~v~vwd  176 (176)
                      +|+|++.++ ++.-.+++|.+|+
T Consensus       199 ~f~pdg~~~yv~~e~~~~V~v~~  221 (365)
T d1jofa_         199 AMHPTGNYLYALMEAGNRICEYV  221 (365)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEE
T ss_pred             EECCCCceEEEeccCCCEEEEEE
Confidence            999999876 5566677888774

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=8.7e-06  Score=61.61  Aligned_cols=140  Identities=10%  Similarity=0.116  Sum_probs=88.5

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCC---CCCeeEEEEccCCcEEEEeeC---------CCcEEEeeCCC
Q psy15417         26 LSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGH---ESDINAVTFFPNGWAFATGSD---------DATCRLFDIRA   93 (176)
Q Consensus        26 ~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h---~~~v~~v~~~~~~~~l~s~s~---------d~~i~iwd~~~   93 (176)
                      ..|.+++.++.. ..+|.+.+||+.+++....+...   ...+....|+||+++++-...         .+.+.++|+.+
T Consensus        22 ~~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~  100 (465)
T d1xfda1          22 AKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH  100 (465)
T ss_dssp             CCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred             CEEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccC
Confidence            358888776654 45788999999988654434332   346778899999988766533         45677888876


Q ss_pred             CCeeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeee-cCCCcc-----------------EEEEE
Q psy15417         94 DQELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGIL-AGHDNR-----------------VSCLG  155 (176)
Q Consensus        94 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~-~~~~~~-----------------i~~~~  155 (176)
                      +..............+....|+|+|..++-.. ++.+.+.+...++..... .+..+.                 -..+-
T Consensus       101 ~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~  179 (465)
T d1xfda1         101 GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHW  179 (465)
T ss_dssp             CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEE
T ss_pred             CceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEE
Confidence            65433222221122345578999998776654 557888876555433222 111111                 14667


Q ss_pred             EeCCCCEEEEcc
Q psy15417        156 VTEDGMAVATGS  167 (176)
Q Consensus       156 ~~~~~~~l~tg~  167 (176)
                      |+|||++||...
T Consensus       180 WSPDgk~iaf~~  191 (465)
T d1xfda1         180 WSPDGTRLAYAA  191 (465)
T ss_dssp             ECTTSSEEEEEE
T ss_pred             ECCCCCeEEEEE
Confidence            999999998764

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.01  E-value=0.00094  Score=47.42  Aligned_cols=150  Identities=12%  Similarity=0.074  Sum_probs=89.2

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCC----CCeeEEEEccCCcEEEEeeC---------------C
Q psy15417         23 VMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHE----SDINAVTFFPNGWAFATGSD---------------D   83 (176)
Q Consensus        23 V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~----~~v~~v~~~~~~~~l~s~s~---------------d   83 (176)
                      -..+.|++++..++++.....+..++..............    ...+.+.+.++|...++-..               +
T Consensus        73 P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~  152 (314)
T d1pjxa_          73 PAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKF  152 (314)
T ss_dssp             EEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSC
T ss_pred             ceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCC
Confidence            4579999999888888777778888887654222111111    13688999999988877432               1


Q ss_pred             CcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCc-----EEEEEcCCCeEEEEeCCCc-ee-----eeeecC-CCccE
Q psy15417         84 ATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGR-----LLLAGYDDFNCNVWDSMKT-ER-----AGILAG-HDNRV  151 (176)
Q Consensus        84 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~g~~d~~i~v~d~~~~-~~-----~~~~~~-~~~~i  151 (176)
                      +.+..++. .++.......   ....+.++|+|++.     ++++-+..+.|..|++... ..     ...+.. +....
T Consensus       153 G~v~~~~~-dg~~~~~~~~---~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~p  228 (314)
T d1pjxa_         153 GSIYCFTT-DGQMIQVDTA---FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGA  228 (314)
T ss_dssp             EEEEEECT-TSCEEEEEEE---ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEE
T ss_pred             ceEEEEee-cCceeEeeCC---cceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccc
Confidence            22322332 1222111111   12235678888753     5566677888888875432 11     112222 12234


Q ss_pred             EEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        152 SCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       152 ~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      -.+++.++|+..++....+.|.+||
T Consensus       229 dGiavD~~GnlyVa~~~~g~I~~~d  253 (314)
T d1pjxa_         229 DGMDFDEDNNLLVANWGSSHIEVFG  253 (314)
T ss_dssp             EEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             eeeEEecCCcEEEEEcCCCEEEEEe
Confidence            5688999998877776677888885

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.83  E-value=0.002  Score=45.66  Aligned_cols=154  Identities=10%  Similarity=0.025  Sum_probs=90.7

Q ss_pred             ccCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCeeeeEecC--CCCCeeEEEEccCCcEEEEeeCC------CcEE
Q psy15417         20 TGDVMSLSLAPDMRTFVSGACD----ASAKLWDIRDGSCKQTFPG--HESDINAVTFFPNGWAFATGSDD------ATCR   87 (176)
Q Consensus        20 ~~~V~~~~~~~~~~~l~s~s~d----g~v~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~s~d------~~i~   87 (176)
                      ......++++++|.++++...+    +.+...+............  -....+.+.+.++|..+++-...      +.+.
T Consensus        81 ~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~  160 (319)
T d2dg1a1          81 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY  160 (319)
T ss_dssp             SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred             CCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeE
Confidence            3456789999999887765432    3345555555443333322  12457889999999877764332      1233


Q ss_pred             EeeCCCCCeeeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCc-e---eee----eecCCCccEEEEEEeC
Q psy15417         88 LFDIRADQELAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKT-E---RAG----ILAGHDNRVSCLGVTE  158 (176)
Q Consensus        88 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~-~---~~~----~~~~~~~~i~~~~~~~  158 (176)
                      .++... ..+.....  .....+.++|+|+++.| ++-+..++|..|++... .   ...    ........--.+++.+
T Consensus       161 ~~~~dg-~~~~~~~~--~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~  237 (319)
T d2dg1a1         161 YVSPDF-RTVTPIIQ--NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS  237 (319)
T ss_dssp             EECTTS-CCEEEEEE--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT
T ss_pred             EEeccc-ceeEEEee--ccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcC
Confidence            333322 22221111  11234679999998754 66677889999986432 1   111    1111112245688999


Q ss_pred             CCCEEEEccCCCcEEEeC
Q psy15417        159 DGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       159 ~~~~l~tg~~d~~v~vwd  176 (176)
                      +|++.++....+.|.+||
T Consensus       238 ~G~l~Va~~~~g~V~~~~  255 (319)
T d2dg1a1         238 DDNLYVAMYGQGRVLVFN  255 (319)
T ss_dssp             TCCEEEEEETTTEEEEEC
T ss_pred             CCCEEEEEcCCCEEEEEC
Confidence            998888877888898875

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.68  E-value=0.0036  Score=43.89  Aligned_cols=146  Identities=12%  Similarity=0.194  Sum_probs=95.2

Q ss_pred             cCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcE-EEEeeCCCcEEEeeCCCCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACD----ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWA-FATGSDDATCRLFDIRADQ   95 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~d----g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~s~d~~i~iwd~~~~~   95 (176)
                      ..++.+.+.|+|.+.++...+    +.-.+|.+..++....+.. -...+.++|+++++. +++-+..+.|..+++....
T Consensus       103 ~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~  181 (295)
T d2ghsa1         103 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDART  181 (295)
T ss_dssp             EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTT
T ss_pred             ccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeec-cCCcceeeecCCCceEEEeecccceeeEeeecccc
Confidence            357888999999877665432    2345777777765544432 234688999999875 4555667788888764221


Q ss_pred             ------eeeEEeecceEeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEe-CCCCE-EEEcc
Q psy15417         96 ------ELAMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVT-EDGMA-VATGS  167 (176)
Q Consensus        96 ------~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~-l~tg~  167 (176)
                            ................+++.++|.+.++....+.|..|| ..++.+..+.-....+++++|- ++.+. ++|.+
T Consensus       182 ~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d-p~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTta  260 (295)
T d2ghsa1         182 GLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD-TDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA  260 (295)
T ss_dssp             CCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC-TTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred             cccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec-CCCcEeeEecCCCCceEEEEEeCCCCCEEEEEEC
Confidence                  111111111112345678899999999988889999999 5677777776555678999996 55444 34443


Q ss_pred             C
Q psy15417        168 W  168 (176)
Q Consensus       168 ~  168 (176)
                      .
T Consensus       261 ~  261 (295)
T d2ghsa1         261 R  261 (295)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.50  E-value=0.0039  Score=42.34  Aligned_cols=95  Identities=17%  Similarity=0.214  Sum_probs=60.3

Q ss_pred             EcCC--CCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeC-CC-----cEEEeeCCCCCeeeE
Q psy15417         28 LAPD--MRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSD-DA-----TCRLFDIRADQELAM   99 (176)
Q Consensus        28 ~~~~--~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~-d~-----~i~iwd~~~~~~~~~   99 (176)
                      .+|+  |+.++-.+ ++.|.+.|+.+++.. .+..+.+.+...+|+|||+.|+-... ++     .|.+.+..+++....
T Consensus         6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           6 LNPDIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             EEEEEETTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             cCCCCCCCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            4677  77766544 567888899988754 56667777899999999998764432 22     255556655543322


Q ss_pred             Eeec----ceEeceEEEEECCCCcEEEEE
Q psy15417        100 YSHD----NIICGITSVAFSRSGRLLLAG  124 (176)
Q Consensus       100 ~~~~----~~~~~v~~~~~~~~~~~l~~g  124 (176)
                      ....    ..........|+|+++.++..
T Consensus        84 t~~~~~~~~~~~~~~~~~~spdg~~l~~~  112 (281)
T d1k32a2          84 TYFSGKSTGRRMFTDVAGFDPDGNLIIST  112 (281)
T ss_dssp             CCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred             eecCCCccCccccccccccCCCCCEEEEE
Confidence            1111    111234567899999887664

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=0.0017  Score=48.63  Aligned_cols=103  Identities=14%  Similarity=0.088  Sum_probs=65.5

Q ss_pred             cCeEEEEEcCCCCEEEEEe---------CCCeEEEEEcCCCeeeeEec--CCCCCeeEEEEccCCcEEEEeeCCCcEEEe
Q psy15417         21 GDVMSLSLAPDMRTFVSGA---------CDASAKLWDIRDGSCKQTFP--GHESDINAVTFFPNGWAFATGSDDATCRLF   89 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s---------~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~s~d~~i~iw   89 (176)
                      -.+....||||+++++...         ..+...++|+.+++......  .....+....|+|+|+.++=.. ++.+.+.
T Consensus        61 ~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~  139 (465)
T d1xfda1          61 LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYC  139 (465)
T ss_dssp             TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEE
T ss_pred             cccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEE
Confidence            3556778999999877763         35678899999886433222  2334566788999998877664 5677777


Q ss_pred             eCCCCCeeeEEee--cceE--------------eceEEEEECCCCcEEEEE
Q psy15417         90 DIRADQELAMYSH--DNII--------------CGITSVAFSRSGRLLLAG  124 (176)
Q Consensus        90 d~~~~~~~~~~~~--~~~~--------------~~v~~~~~~~~~~~l~~g  124 (176)
                      +..++........  ...+              ..-..+-|+|||+.|+..
T Consensus       140 ~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~  190 (465)
T d1xfda1         140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYA  190 (465)
T ss_dssp             SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEE
T ss_pred             ecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEE
Confidence            7665544332211  0000              011356799999988764

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.46  E-value=0.0076  Score=42.12  Aligned_cols=151  Identities=11%  Similarity=0.035  Sum_probs=93.5

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecC--C--CCCeeEEEEccCCcEEEEeeCC----CcEEEeeCC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPG--H--ESDINAVTFFPNGWAFATGSDD----ATCRLFDIR   92 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~--h--~~~v~~v~~~~~~~~l~s~s~d----~~i~iwd~~   92 (176)
                      ..+.++.+.+++.++++ +.+ -+..+|..+++.......  .  ...++.+.+.|+|+..++....    +.-.+|.+.
T Consensus        59 ~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~  136 (295)
T d2ghsa1          59 FMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA  136 (295)
T ss_dssp             SCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred             CCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeec
Confidence            46778888888876665 445 488999998875433221  1  1347889999999877765432    234555555


Q ss_pred             CCCeeeEEeecceEeceEEEEECCCCcE-EEEEcCCCeEEEEeCCCc------e--eeeeecCCCccEEEEEEeCCCCEE
Q psy15417         93 ADQELAMYSHDNIICGITSVAFSRSGRL-LLAGYDDFNCNVWDSMKT------E--RAGILAGHDNRVSCLGVTEDGMAV  163 (176)
Q Consensus        93 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~g~~d~~i~v~d~~~~------~--~~~~~~~~~~~i~~~~~~~~~~~l  163 (176)
                      .++.......   ....+.+.|++++.. +++-+..+.|..+++...      +  ......+.......+++..+|++.
T Consensus       137 ~g~~~~~~~~---~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlW  213 (295)
T d2ghsa1         137 KGKVTKLFAD---ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW  213 (295)
T ss_dssp             TTEEEEEEEE---ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE
T ss_pred             CCcEEEEeec---cCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEE
Confidence            4433222221   123467899999875 456667788888875321      1  112223334456778888888877


Q ss_pred             EEccCCCcEEEeC
Q psy15417        164 ATGSWDSFLRIWN  176 (176)
Q Consensus       164 ~tg~~d~~v~vwd  176 (176)
                      ++.-..+.|..||
T Consensus       214 va~~~~g~V~~~d  226 (295)
T d2ghsa1         214 NARWGEGAVDRYD  226 (295)
T ss_dssp             EEEETTTEEEEEC
T ss_pred             eeeeCCCceEEec
Confidence            6655566777775

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.031  Score=37.56  Aligned_cols=131  Identities=11%  Similarity=0.060  Sum_probs=75.5

Q ss_pred             CeEEEEEcCCCCE-EEEEeCCCe--EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCC-CcEEEee--CCCCC
Q psy15417         22 DVMSLSLAPDMRT-FVSGACDAS--AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDD-ATCRLFD--IRADQ   95 (176)
Q Consensus        22 ~V~~~~~~~~~~~-l~s~s~dg~--v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d-~~i~iwd--~~~~~   95 (176)
                      ......+++++.. +++...++.  +...+...+. ...+...........++|++..++..+.+ +...+|.  .....
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~  206 (269)
T d2hqsa1         128 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG  206 (269)
T ss_dssp             CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred             cccccccccccccceecccccCCceEeeeeccccc-ceeeecccccccccccccccceeEEEeecCCceeeeEeeccccc
Confidence            3344556666654 444444554  4555555543 33344455667778999999877766554 4445544  33332


Q ss_pred             eeeEEeecceEeceEEEEECCCCcEEEEEc---CCCeEEEEeCCCceeeeeecCCCccEEEEEEeC
Q psy15417         96 ELAMYSHDNIICGITSVAFSRSGRLLLAGY---DDFNCNVWDSMKTERAGILAGHDNRVSCLGVTE  158 (176)
Q Consensus        96 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~---~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~  158 (176)
                      . ......   .......|+|||+.|+-.+   ....+.++++..+.. ..+....+.+...+|+|
T Consensus       207 ~-~~~~~~---~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~-~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         207 V-QVLSST---FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK-ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             E-EECCCS---SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE-EECCCSSSEEEEEEECC
T ss_pred             c-eEeecC---ccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE-EEEeCCCCcEEeEEeCC
Confidence            2 111111   1234567999999775432   234678889765543 44555566777788988

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.70  E-value=0.053  Score=38.47  Aligned_cols=114  Identities=18%  Similarity=0.186  Sum_probs=70.2

Q ss_pred             EEEEcCCCCEEEEEeCCC-----------eEEEEEcCCCeee--eEec-CCCCCeeEEEEccCCcEEEEeeCC-CcEEEe
Q psy15417         25 SLSLAPDMRTFVSGACDA-----------SAKLWDIRDGSCK--QTFP-GHESDINAVTFFPNGWAFATGSDD-ATCRLF   89 (176)
Q Consensus        25 ~~~~~~~~~~l~s~s~dg-----------~v~~wd~~~~~~~--~~~~-~h~~~v~~v~~~~~~~~l~s~s~d-~~i~iw   89 (176)
                      ......++++++.|+.+.           .+.+||..+++-.  ..+. .+..-..+.++.++++.++.|+.+ ..+.+|
T Consensus        24 ~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~y  103 (387)
T d1k3ia3          24 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLY  103 (387)
T ss_dssp             EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEE
T ss_pred             EEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEe
Confidence            344456888888887531           2678999887532  2222 233334567788999999998776 579999


Q ss_pred             eCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC------CeEEEEeCCCce
Q psy15417         90 DIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD------FNCNVWDSMKTE  139 (176)
Q Consensus        90 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d------~~i~v~d~~~~~  139 (176)
                      |..+..- ...........-...+..+++++++.|+.+      ..+.+||..+.+
T Consensus       104 d~~~~~w-~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         104 DSSSDSW-IPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             EGGGTEE-EECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             cCccCcc-cccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence            9875432 222211111112345667789998887643      357889976543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.19  E-value=0.066  Score=35.84  Aligned_cols=93  Identities=15%  Similarity=0.122  Sum_probs=55.7

Q ss_pred             EccC--CcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEc----CCC--eEEEEeCCCceee
Q psy15417         70 FFPN--GWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGY----DDF--NCNVWDSMKTERA  141 (176)
Q Consensus        70 ~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~----~d~--~i~v~d~~~~~~~  141 (176)
                      .+|+  |+.++=.+. +.|.+.|+.+++...+.....   ......|+|||+.++-..    .+.  .+.+++...++..
T Consensus         6 ~sPdi~G~~v~f~~~-~dl~~~d~~~g~~~~Lt~~~~---~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~   81 (281)
T d1k32a2           6 LNPDIHGDRIIFVCC-DDLWEHDLKSGSTRKIVSNLG---VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK   81 (281)
T ss_dssp             EEEEEETTEEEEEET-TEEEEEETTTCCEEEEECSSS---EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred             cCCCCCCCEEEEEeC-CcEEEEECCCCCEEEEecCCC---cccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence            4677  777665443 467777888776544433322   245678999998776432    222  3667776666543


Q ss_pred             eeec------CCCccEEEEEEeCCCCEEEEc
Q psy15417        142 GILA------GHDNRVSCLGVTEDGMAVATG  166 (176)
Q Consensus       142 ~~~~------~~~~~i~~~~~~~~~~~l~tg  166 (176)
                      ..-.      .........+|+|+++.|+..
T Consensus        82 ~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~  112 (281)
T d1k32a2          82 RITYFSGKSTGRRMFTDVAGFDPDGNLIIST  112 (281)
T ss_dssp             ECCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred             EeeecCCCccCccccccccccCCCCCEEEEE
Confidence            3211      112234667899999888754

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=96.16  E-value=0.17  Score=38.42  Aligned_cols=45  Identities=13%  Similarity=0.093  Sum_probs=31.2

Q ss_pred             CCcEEEEEcCCCeEEEEeCCCceeeeeecCCCcc-EEEEEEeCCCC
Q psy15417        117 SGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNR-VSCLGVTEDGM  161 (176)
Q Consensus       117 ~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~  161 (176)
                      .+.++++|..|+.++.+|.++++.+.++.-.... -..+.|..+|+
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~Gk  532 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR  532 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            5667788999999999999999998876532211 11244555664

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.14  E-value=0.023  Score=43.60  Aligned_cols=77  Identities=19%  Similarity=0.253  Sum_probs=53.5

Q ss_pred             CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcE
Q psy15417         42 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL  120 (176)
Q Consensus        42 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  120 (176)
                      |.+.-+|+.+++.+...+.+. ++.+-.+...+.+++.++.|+.++.+|.++++++..+........ .-++|..+|+.
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~-~P~ty~~~G~q  542 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVS-PPITWEQDGEQ  542 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS-CCEEEEETTEE
T ss_pred             CeEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccc-cCEEEEECCEE
Confidence            678889999999888877443 333333445667888899999999999999999877765432211 11445557754

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.81  E-value=0.22  Score=36.63  Aligned_cols=100  Identities=10%  Similarity=0.046  Sum_probs=61.9

Q ss_pred             EEEEcC---CCCEEEEEe-CCCeEEEEEcCCCeeeeEecCC-CCCeeEEEEc--cCCcEEEEeeCCCc------------
Q psy15417         25 SLSLAP---DMRTFVSGA-CDASAKLWDIRDGSCKQTFPGH-ESDINAVTFF--PNGWAFATGSDDAT------------   85 (176)
Q Consensus        25 ~~~~~~---~~~~l~s~s-~dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~--~~~~~l~s~s~d~~------------   85 (176)
                      .++|..   ||++++... .+..|.+.|+++-++...+.-. .+..-.+...  |+-.+++..+++..            
T Consensus        89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~  168 (459)
T d1fwxa2          89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV  168 (459)
T ss_dssp             EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred             cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccch
Confidence            677755   677665554 6788999999999876644432 2344555554  44567777766432            


Q ss_pred             ------EEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC
Q psy15417         86 ------CRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD  127 (176)
Q Consensus        86 ------i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d  127 (176)
                            +...|..+.+.........   .+..+.++++|.++++.+.+
T Consensus       169 ~~y~~~~t~ID~~tm~V~~QV~V~g---~ld~~~~s~dGK~af~TsyN  213 (459)
T d1fwxa2         169 ANYVNVFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKWAFSTSYN  213 (459)
T ss_dssp             G-EEEEEEEEETTTTEEEEEEEESS---CCCCEEECSSSSEEEEEESC
T ss_pred             hhcceEEEEEecCCceEEEEeeeCC---ChhccccCCCCCEEEEEecc
Confidence                  4556766554433322222   23458899999988876543

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=95.71  E-value=0.25  Score=37.46  Aligned_cols=77  Identities=14%  Similarity=0.092  Sum_probs=45.9

Q ss_pred             CcEEEeeCCCCCeeeEEeecceEe-ceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEEEEeCCCC
Q psy15417         84 ATCRLFDIRADQELAMYSHDNIIC-GITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGM  161 (176)
Q Consensus        84 ~~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~  161 (176)
                      |.+.-||+.+++.+...+...... +.  +  ...+.++++|..|+.++.+|.++++.+.++.-... .-..+.|.-+|+
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~gg~--l--~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGk  513 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNGGT--L--STAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGR  513 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCE--E--EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCCce--e--EECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            356667777776655544332211 11  1  12455677899999999999999999887653221 112244555664


Q ss_pred             -EEE
Q psy15417        162 -AVA  164 (176)
Q Consensus       162 -~l~  164 (176)
                       ||+
T Consensus       514 qyv~  517 (560)
T d1kv9a2         514 QYVA  517 (560)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence             444

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.52  E-value=0.13  Score=36.45  Aligned_cols=149  Identities=8%  Similarity=0.110  Sum_probs=79.0

Q ss_pred             EEEEEcCCCCEEEEEeC------------CCeEEEEEcCCCeee---eEecCCC-----CCeeEEEE--ccCCc-EEEEe
Q psy15417         24 MSLSLAPDMRTFVSGAC------------DASAKLWDIRDGSCK---QTFPGHE-----SDINAVTF--FPNGW-AFATG   80 (176)
Q Consensus        24 ~~~~~~~~~~~l~s~s~------------dg~v~~wd~~~~~~~---~~~~~h~-----~~v~~v~~--~~~~~-~l~s~   80 (176)
                      ..+...|++..+++++.            .|.+.++|+++.+..   ..+.+..     -..-++.+  .+++. .|+..
T Consensus        38 EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vv  117 (340)
T d1v04a_          38 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV  117 (340)
T ss_dssp             CEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred             ceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEE
Confidence            45778899887776642            488999998765321   1222111     01233333  33444 45554


Q ss_pred             e---CCCcEEEeeCCCCCeeeEEe--e-cceEeceEEEEECCCCcEEEEEc-----------------CCCeEEEEeCCC
Q psy15417         81 S---DDATCRLFDIRADQELAMYS--H-DNIICGITSVAFSRSGRLLLAGY-----------------DDFNCNVWDSMK  137 (176)
Q Consensus        81 s---~d~~i~iwd~~~~~~~~~~~--~-~~~~~~v~~~~~~~~~~~l~~g~-----------------~d~~i~v~d~~~  137 (176)
                      .   ...+|.+|++..+.....+.  . .......+.+++..++.++++-.                 ..+.+..||...
T Consensus       118 nH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~  197 (340)
T d1v04a_         118 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND  197 (340)
T ss_dssp             ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSC
T ss_pred             eccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCc
Confidence            3   23568888764333211111  1 11123467888888888887721                 122344455333


Q ss_pred             ceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcEEEe
Q psy15417        138 TERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFLRIW  175 (176)
Q Consensus       138 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v~vw  175 (176)
                      .+...   .....-+.++++|++++| ++-+..++|++|
T Consensus       198 ~~~~~---~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y  233 (340)
T d1v04a_         198 VRVVA---EGFDFANGINISPDGKYVYIAELLAHKIHVY  233 (340)
T ss_dssp             EEEEE---EEESSEEEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred             eEEEc---CCCCccceeEECCCCCEEEEEeCCCCeEEEE
Confidence            22222   122345788999998766 455556677766

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.50  E-value=0.34  Score=36.75  Aligned_cols=76  Identities=13%  Similarity=-0.008  Sum_probs=44.2

Q ss_pred             cEEEeeCCCCCeeeEEeecceE-eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEEEEeCCCC-
Q psy15417         85 TCRLFDIRADQELAMYSHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGM-  161 (176)
Q Consensus        85 ~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~-  161 (176)
                      .+.-+|+++++.+......... .++.  .  ..+.++++|+.|+.++.+|.++++.+.++.-... .-..+.|..+|+ 
T Consensus       445 ~l~AiD~~TG~~~W~~~~~~~~~~g~l--~--TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq  520 (571)
T d2ad6a1         445 QIRAFDLTTGKAKWTKWEKFAAWGGTL--Y--TKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ  520 (571)
T ss_dssp             EEEEECTTTCCEEEEEEESSCCCSBCE--E--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cEEEeccCCCceeeEcCCCCCCCccee--E--ecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence            4666677766665444332211 1111  1  1345667899999999999999999887643211 122345555664 


Q ss_pred             EEE
Q psy15417        162 AVA  164 (176)
Q Consensus       162 ~l~  164 (176)
                      ||+
T Consensus       521 Yi~  523 (571)
T d2ad6a1         521 YIG  523 (571)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            553

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.47  E-value=0.033  Score=42.60  Aligned_cols=78  Identities=15%  Similarity=0.112  Sum_probs=49.8

Q ss_pred             CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEE
Q psy15417         42 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLL  121 (176)
Q Consensus        42 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  121 (176)
                      |.+.-+|+++++.+.+.+.-. +..+-.+...+.+++.++.|+.++.+|.++++.+..+....... -.-++|..+|+.+
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~-~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~-a~P~ty~~dGkqY  521 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGI-GSPMTYSFKGKQY  521 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-SCCEEEEETTEEE
T ss_pred             ccEEEeccCCCceeeEcCCCC-CCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCce-ecceEEEECCEEE
Confidence            467788999998887765322 22211222345578889999999999999999887766543221 1124444477644

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=95.21  E-value=0.069  Score=40.63  Aligned_cols=62  Identities=13%  Similarity=0.171  Sum_probs=46.2

Q ss_pred             CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecc
Q psy15417         42 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDN  104 (176)
Q Consensus        42 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~  104 (176)
                      |.+.-||+.+++.+..++.. .+..+-.+.-.+.+++.++.|+.++.+|.++++.+..+....
T Consensus       438 G~l~A~D~~tGk~~W~~~~~-~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~  499 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS  499 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             cceEEEeCCCCeEeeeccCC-CCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCC
Confidence            56888999999988877632 233333344456688899999999999999999887766543

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=94.97  E-value=0.046  Score=41.74  Aligned_cols=77  Identities=13%  Similarity=0.132  Sum_probs=52.3

Q ss_pred             CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcE
Q psy15417         42 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL  120 (176)
Q Consensus        42 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  120 (176)
                      |.+.-||+.+++.+..++... +..+-...-.+.+++.++.|+.++.+|.++++.+..+........ .-++|.-+|+.
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~-~P~ty~~~GkQ  533 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVA-APSTYMVDGRQ  533 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS-CCEEEEETTEE
T ss_pred             ccEEEeCCCCCceEeeecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccc-cCEEEEECCEE
Confidence            468899999999998876432 222223344677888999999999999999999877765432111 11334347763

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=94.74  E-value=0.51  Score=34.62  Aligned_cols=129  Identities=12%  Similarity=-0.003  Sum_probs=76.9

Q ss_pred             EEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCC--------------------------------------c
Q psy15417         44 AKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDA--------------------------------------T   85 (176)
Q Consensus        44 v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~--------------------------------------~   85 (176)
                      +-++|..+.+....+.- .+....+.++++|+++++.+...                                      .
T Consensus       175 ~t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eing  253 (459)
T d1fwxa2         175 FTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG  253 (459)
T ss_dssp             EEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred             EEEEecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCC
Confidence            45788888876666553 34567899999999988876431                                      1


Q ss_pred             EEEeeCCCC--Cee-eEEeecceEeceEEEEECCCCcEEE-EEcCCCeEEEEeCCCcee-----------eeeecCCCcc
Q psy15417         86 CRLFDIRAD--QEL-AMYSHDNIICGITSVAFSRSGRLLL-AGYDDFNCNVWDSMKTER-----------AGILAGHDNR  150 (176)
Q Consensus        86 i~iwd~~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~l~-~g~~d~~i~v~d~~~~~~-----------~~~~~~~~~~  150 (176)
                      +.+-|.+..  ... ...+..   .....+.++|||++++ +|..+.++.|+|+++-+.           +.......-.
T Consensus       254 V~VVD~~~~~~~~v~~yIPVp---KsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglg  330 (459)
T d1fwxa2         254 VKVVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG  330 (459)
T ss_dssp             EEEEECSGG--CSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSC
T ss_pred             ceeecccccCCcceeEEEecC---CCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcC
Confidence            122222211  011 111111   1234578999999764 566888999999753211           1111111122


Q ss_pred             EEEEEEeCCCCEEEEccCCCcEEEeC
Q psy15417        151 VSCLGVTEDGMAVATGSWDSFLRIWN  176 (176)
Q Consensus       151 i~~~~~~~~~~~l~tg~~d~~v~vwd  176 (176)
                      -...+|...|....|-.-|.+|.-|+
T Consensus       331 PLht~fd~~g~aytslfids~v~kw~  356 (459)
T d1fwxa2         331 PLHTAFDGRGNAYTSLFLDSQVVKWN  356 (459)
T ss_dssp             EEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred             ccccccCCCceEEEEeeccceEEEEe
Confidence            24567888887777888899998885

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.58  E-value=0.38  Score=32.53  Aligned_cols=153  Identities=7%  Similarity=-0.052  Sum_probs=86.6

Q ss_pred             CccCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEeeCCCcEEEeeCCCCCe
Q psy15417         19 HTGDVMSLSLAPDMRTFVSG-ACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATGSDDATCRLFDIRADQE   96 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~s~-s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~s~d~~i~iwd~~~~~~   96 (176)
                      +...+..++|++..+.++-. ..++.|+..+++.+.....+..--..+.++++... ++.+++-...+.|.+.++.....
T Consensus        34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~  113 (263)
T d1npea_          34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR  113 (263)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceE
Confidence            44557789998766655544 45677888888765544444433356889999864 45555666677899988865543


Q ss_pred             eeEEeecceEeceEEEEECCCCcEEEEEc-C--CCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEE-EEccCCCcE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLLLAGY-D--DFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAV-ATGSWDSFL  172 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l~~g~-~--d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~tg~~d~~v  172 (176)
                      .......  ...+..++++|...+++-.. .  ...|.--++............-.....+++.+.+..| .+-...+.|
T Consensus       114 ~~l~~~~--l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I  191 (263)
T d1npea_         114 RVLFDTG--LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRA  191 (263)
T ss_dssp             EEEECSS--CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred             EEEeccc--ccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEE
Confidence            3222211  12356788888765554332 2  2234434443332222222222345678887665544 443444555


Q ss_pred             E
Q psy15417        173 R  173 (176)
Q Consensus       173 ~  173 (176)
                      .
T Consensus       192 ~  192 (263)
T d1npea_         192 E  192 (263)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.56  E-value=0.3  Score=37.13  Aligned_cols=77  Identities=13%  Similarity=0.162  Sum_probs=46.7

Q ss_pred             CcEEEeeCCCCCeeeEEeecceE-eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEEEEeCCCC
Q psy15417         84 ATCRLFDIRADQELAMYSHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGM  161 (176)
Q Consensus        84 ~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~  161 (176)
                      |.+.-+|+.+++.+...+..... .++    ....+.++++|+.|+.++.+|.++++.+..+.-... .-..+.|..+|+
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~~~g~----lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~  541 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPLWAGV----LATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSCC----EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             CeEEEEcCCCCcEEeecCCCCCCccce----eEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            45666777777665444332211 111    122556777899999999999999999887753222 112255666774


Q ss_pred             -EEE
Q psy15417        162 -AVA  164 (176)
Q Consensus       162 -~l~  164 (176)
                       |++
T Consensus       542 qYv~  545 (582)
T d1flga_         542 QYLG  545 (582)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence             544

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=94.22  E-value=0.053  Score=41.64  Aligned_cols=77  Identities=14%  Similarity=0.080  Sum_probs=51.1

Q ss_pred             CeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcE
Q psy15417         42 ASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRL  120 (176)
Q Consensus        42 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  120 (176)
                      |.+.-||+.+++.+..... ..+..+-.+...+.+++.|+.|+.++.+|.++++.+..+........ .-++|.-+|+.
T Consensus       453 G~l~A~D~~TG~~~W~~~~-~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a-~P~tY~~dGkQ  529 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIG-YPMTYTHKGTQ  529 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS-CCEEEEETTEE
T ss_pred             ceEEEEeCCCCceecccCC-CCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCccc-CCeEEEECCEE
Confidence            5788899999998776642 23333333344567888899999999999999999877665432111 11334347764

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.95  E-value=0.39  Score=34.82  Aligned_cols=103  Identities=11%  Similarity=0.082  Sum_probs=60.2

Q ss_pred             CccCeEEEEEcCCCCEEE-EEeCC----CeEEEEEcCCCeeee-EecCCCCCeeEEEEccCCcEEEEeeCC---------
Q psy15417         19 HTGDVMSLSLAPDMRTFV-SGACD----ASAKLWDIRDGSCKQ-TFPGHESDINAVTFFPNGWAFATGSDD---------   83 (176)
Q Consensus        19 h~~~V~~~~~~~~~~~l~-s~s~d----g~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~s~d---------   83 (176)
                      +.-.+...++||++++++ +-+..    ..++++|+.+++.+. .+..  .....++|.+++..|+-...+         
T Consensus       123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~  200 (430)
T d1qfma1         123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT  200 (430)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred             ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc--ccccceEEcCCCCEEEEEEeccccCccccc
Confidence            333345677899998776 32333    347899999998654 2221  122568899999877654432         


Q ss_pred             -------CcEEEeeCCCCCee--eEEeecceEeceEEEEECCCCcEEEE
Q psy15417         84 -------ATCRLFDIRADQEL--AMYSHDNIICGITSVAFSRSGRLLLA  123 (176)
Q Consensus        84 -------~~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~  123 (176)
                             ..+..|.+.+++..  ..++......-...+..++++.+++.
T Consensus       201 ~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i  249 (430)
T d1qfma1         201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLL  249 (430)
T ss_dssp             CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred             ccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeE
Confidence                   24666777655332  23332211112345667888887754

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=93.54  E-value=0.76  Score=32.10  Aligned_cols=104  Identities=12%  Similarity=0.060  Sum_probs=59.0

Q ss_pred             CeeEEEEccCCcEEEEeeCCC-----------cEEEeeCCCCCee--eEEeecceEeceEEEEECCCCcEEEEEcCC-Ce
Q psy15417         64 DINAVTFFPNGWAFATGSDDA-----------TCRLFDIRADQEL--AMYSHDNIICGITSVAFSRSGRLLLAGYDD-FN  129 (176)
Q Consensus        64 ~v~~v~~~~~~~~l~s~s~d~-----------~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-~~  129 (176)
                      ++.......+++.++-|+.+.           .+.+||..++.-.  ........ .-.....+.+++.+++.|+.+ ..
T Consensus        21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~-~~~~~~~~~~~g~i~v~Gg~~~~~   99 (387)
T d1k3ia3          21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD-MFCPGISMDGNGQIVVTGGNDAKK   99 (387)
T ss_dssp             CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC-CSSCEEEECTTSCEEEECSSSTTC
T ss_pred             ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcc-cceeEEEEecCCcEEEeecCCCcc
Confidence            333444455677777776431           2668998765321  11111111 112345678899999988655 57


Q ss_pred             EEEEeCCCceeee--eecCCCccEEEEEEeCCCCEEEEccCC
Q psy15417        130 CNVWDSMKTERAG--ILAGHDNRVSCLGVTEDGMAVATGSWD  169 (176)
Q Consensus       130 i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~tg~~d  169 (176)
                      +.+||..+..-..  .+... ..-..++..+++.+++.|+.+
T Consensus       100 ~~~yd~~~~~w~~~~~~~~~-r~~~~~~~~~dG~v~v~GG~~  140 (387)
T d1k3ia3         100 TSLYDSSSDSWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSW  140 (387)
T ss_dssp             EEEEEGGGTEEEECCCCSSC-CSSCEEEECTTSCEEEECCCC
T ss_pred             eeEecCccCccccccccccc-ccccceeeecCCceeeecccc
Confidence            8999976543322  22211 122345677888898888753

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=92.99  E-value=1.4  Score=33.50  Aligned_cols=77  Identities=14%  Similarity=0.010  Sum_probs=45.1

Q ss_pred             CcEEEeeCCCCCeeeEEeecceE-eceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCc-cEEEEEEeCCCC
Q psy15417         84 ATCRLFDIRADQELAMYSHDNII-CGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDN-RVSCLGVTEDGM  161 (176)
Q Consensus        84 ~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~  161 (176)
                      |.+.-||+.+++.+......... .++.    ...+.++++|..|+.++.+|.++++.+.++.-... .-..+.|.-+|+
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~~~~gg~l----sTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGk  528 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERFAVWGGTM----ATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT  528 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCE----EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             ceEEEEeCCCCceecccCCCCCCcccee----EecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCE
Confidence            35666777776665443332211 1111    12456777899999999999999999887753221 112244555664


Q ss_pred             -EEE
Q psy15417        162 -AVA  164 (176)
Q Consensus       162 -~l~  164 (176)
                       ||+
T Consensus       529 QYva  532 (596)
T d1w6sa_         529 QYVA  532 (596)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence             444

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=92.46  E-value=1.4  Score=32.21  Aligned_cols=53  Identities=17%  Similarity=0.315  Sum_probs=38.4

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeee--Eec------CCCCCeeEEEEccC
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQ--TFP------GHESDINAVTFFPN   73 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~--~~~------~h~~~v~~v~~~~~   73 (176)
                      ..-++|+|.|++++|++--..|.|++++..+++...  .+.      .-+.....++|+|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            355699999999988887567999999987765332  221      11356789999985

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.94  E-value=1.6  Score=31.83  Aligned_cols=55  Identities=11%  Similarity=0.126  Sum_probs=38.0

Q ss_pred             CCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEeec------ceEeceEEEEECCC
Q psy15417         63 SDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYSHD------NIICGITSVAFSRS  117 (176)
Q Consensus        63 ~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~  117 (176)
                      ....+++|.|+++.|++--..|.|++++..+++........      ....++..++|||+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            34679999999998888755789999887665443222211      11246778999996

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.60  E-value=3  Score=29.73  Aligned_cols=138  Identities=9%  Similarity=-0.008  Sum_probs=71.6

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcEEEeeCCCCCeeeEEe
Q psy15417         22 DVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATCRLFDIRADQELAMYS  101 (176)
Q Consensus        22 ~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~  101 (176)
                      .|..++|+.+  .|+.. .++.+..++..+-........-..++..+...|  ..++....++.+.++++..........
T Consensus        88 ~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p--~~~~l~~~~~~~~~~~l~~~~~~~~~~  162 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVN--NTLVILNSVNDLSALDLRTKSTKQLAQ  162 (381)
T ss_dssp             TEEEEEEETT--EEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CeEEEEeeCC--EEEEE-eCCCEEEEEeeccccccccccccccccceecCC--ceeEEEecCCCEEEEEeccCccccccC
Confidence            4788899755  34443 455677787765432333333345566676665  456666778888888887664322110


Q ss_pred             -e--cceEeceEEEEECCCCcEEEEEcCCCeEEEE-eCCCceeeeeecCCCccEEEEEEeCCCCEEEE
Q psy15417        102 -H--DNIICGITSVAFSRSGRLLLAGYDDFNCNVW-DSMKTERAGILAGHDNRVSCLGVTEDGMAVAT  165 (176)
Q Consensus       102 -~--~~~~~~v~~~~~~~~~~~l~~g~~d~~i~v~-d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~t  165 (176)
                       .  ........++.|++.+..++++..+. ..+. ++.....+.........+.++.|..+..+++.
T Consensus       163 ~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vv  229 (381)
T d1xipa_         163 NVTSFDVTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  229 (381)
T ss_dssp             SEEEEEECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             CcceEEecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCCCcCCCcceeEEEEecCceEEEE
Confidence             0  00112355666776666666653322 2111 11111111001122346777888766655543

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.71  E-value=2.7  Score=28.07  Aligned_cols=149  Identities=10%  Similarity=0.035  Sum_probs=81.0

Q ss_pred             cCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEE-EeeCCCcEEEe--eCCCCCe
Q psy15417         21 GDVMSLSLAPDMRTFV-SGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFA-TGSDDATCRLF--DIRADQE   96 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~-s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~s~d~~i~iw--d~~~~~~   96 (176)
                      ..+.+++++.-+..|+ +-...+.|.+.+++...+...+...-..+.+++++|....++ +-...+..+|+  ++.....
T Consensus        79 ~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~  158 (263)
T d1npea_          79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (263)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc
Confidence            4577888887555554 445567899999875543333333335688999998755444 43332333454  4433222


Q ss_pred             eeEEeecceEeceEEEEECCCCcEE-EEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         97 LAMYSHDNIICGITSVAFSRSGRLL-LAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        97 ~~~~~~~~~~~~v~~~~~~~~~~~l-~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      . ....... ...+.+++.+.+..| .+-...+.|...+...........+... -..+++.. +....+=...+.|.
T Consensus       159 ~-~i~~~~~-~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~-P~~lav~~-~~lYwtd~~~~~I~  232 (263)
T d1npea_         159 R-ILAQDNL-GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY-PFAVTSYG-KNLYYTDWKTNSVI  232 (263)
T ss_dssp             E-EEECTTC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCS-EEEEEEET-TEEEEEETTTTEEE
T ss_pred             e-eeeeecc-cccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCC-cEEEEEEC-CEEEEEECCCCEEE
Confidence            2 2222221 234578887766544 5545677888888755444333333222 34677653 33334433444443

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.52  E-value=2.8  Score=28.01  Aligned_cols=150  Identities=13%  Similarity=0.037  Sum_probs=83.2

Q ss_pred             cCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC-CcEEEEe-eCCCcEEEeeCCCCCee
Q psy15417         21 GDVMSLSLAPDMRTF-VSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPN-GWAFATG-SDDATCRLFDIRADQEL   97 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l-~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~-s~d~~i~iwd~~~~~~~   97 (176)
                      ..+..+++.+-+..| .+-...+.|.+.+++.......+........+++++|. +..+++- +..+.|.-.++......
T Consensus        77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~  156 (266)
T d1ijqa1          77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  156 (266)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred             CCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCcee
Confidence            345578887655544 44455678999998866555555555566889999985 4444443 22345655565443332


Q ss_pred             eEEeecceEeceEEEEECCCCc-EEEEEcCCCeEEEEeCCCceeeee--ecCCCccEEEEEEeCCCCEEEEccCCCcEE
Q psy15417         98 AMYSHDNIICGITSVAFSRSGR-LLLAGYDDFNCNVWDSMKTERAGI--LAGHDNRVSCLGVTEDGMAVATGSWDSFLR  173 (176)
Q Consensus        98 ~~~~~~~~~~~v~~~~~~~~~~-~l~~g~~d~~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~tg~~d~~v~  173 (176)
                      .... .. ....+.+++.+.+. ++.+-...+.|...++........  ..........+++.. +..+.+-..++.|.
T Consensus       157 ~l~~-~~-~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~-~~ly~td~~~~~I~  232 (266)
T d1ijqa1         157 SLVT-EN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIF  232 (266)
T ss_dssp             EEEC-SS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEE
T ss_pred             cccc-cc-cceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEEC-CEEEEEECCCCeEE
Confidence            2222 11 12346788887655 445556677888888654332222  222223345666663 33334444444443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.69  E-value=5.2  Score=28.52  Aligned_cols=98  Identities=13%  Similarity=0.116  Sum_probs=56.4

Q ss_pred             CeeEEEEccCCcEEE-EeeCCC----cEEEeeCCCCCeeeEEeecceEeceEEEEECCCCcEEEEEcCC-----------
Q psy15417         64 DINAVTFFPNGWAFA-TGSDDA----TCRLFDIRADQELAMYSHDNIICGITSVAFSRSGRLLLAGYDD-----------  127 (176)
Q Consensus        64 ~v~~v~~~~~~~~l~-s~s~d~----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~g~~d-----------  127 (176)
                      .+.+.+++|++++++ +-+.+|    .++++|+.+++.+.. ....  .....+.|.+++..|+-...+           
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~-~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~  202 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET  202 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceeccc-cccc--ccccceEEcCCCCEEEEEEeccccCccccccc
Confidence            345678899988765 333333    589999998865432 1111  122468899999877543322           


Q ss_pred             -----CeEEEEeCCCcee--eeeecC--CCccEEEEEEeCCCCEEE
Q psy15417        128 -----FNCNVWDSMKTER--AGILAG--HDNRVSCLGVTEDGMAVA  164 (176)
Q Consensus       128 -----~~i~v~d~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~l~  164 (176)
                           ..+..+.+.+...  ...+..  ....+..+..++++.++.
T Consensus       203 ~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~  248 (430)
T d1qfma1         203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVL  248 (430)
T ss_dssp             CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEE
T ss_pred             ccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceee
Confidence                 2455666544322  122222  223455667788888865

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.60  E-value=4.7  Score=27.94  Aligned_cols=151  Identities=5%  Similarity=-0.001  Sum_probs=86.2

Q ss_pred             cCeEEEEEcCCCCEEEEEe---C----CCeEEEEEcCCCeeeeEecCCCCCeeEEEEccC--CcEEEEe----eCCCcEE
Q psy15417         21 GDVMSLSLAPDMRTFVSGA---C----DASAKLWDIRDGSCKQTFPGHESDINAVTFFPN--GWAFATG----SDDATCR   87 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s---~----dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~----s~d~~i~   87 (176)
                      ..|..-..+++.+.++..+   .    .|.+++|..+.. ..+.+.||.+.-..+.+..+  ...+++-    ...+.+.
T Consensus       148 ~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLh  226 (327)
T d1utca2         148 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH  226 (327)
T ss_dssp             CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEE
T ss_pred             ceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEE
Confidence            3455566677777543322   1    366789988765 35667777644433333211  1222221    2235788


Q ss_pred             EeeCCCCCe-eeEE-------eecce---EeceEEEEECCCCcEEEEEcCCCeEEEEeCCCceeeeeecCCCccEEEEEE
Q psy15417         88 LFDIRADQE-LAMY-------SHDNI---ICGITSVAFSRSGRLLLAGYDDFNCNVWDSMKTERAGILAGHDNRVSCLGV  156 (176)
Q Consensus        88 iwd~~~~~~-~~~~-------~~~~~---~~~v~~~~~~~~~~~l~~g~~d~~i~v~d~~~~~~~~~~~~~~~~i~~~~~  156 (176)
                      +-++..... ...+       .++..   .-++ ++.+++.-.++..-+.-|.+++||++++.++...+--.+.|...+-
T Consensus       227 IiEig~~~~g~~~f~kk~vdi~fppea~~DFPv-amqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~  305 (327)
T d1utca2         227 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP  305 (327)
T ss_dssp             EEECSCCCTTCCCCCCEEEECCCCTTCTTCCEE-EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred             EEEcCCCccCCCCCcceeEEEECCccccCCcEE-EEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceEEecc
Confidence            888754221 0000       01100   0122 4556666666767778899999999999988877666677766666


Q ss_pred             eCCCCEEEEccCCCcEE
Q psy15417        157 TEDGMAVATGSWDSFLR  173 (176)
Q Consensus       157 ~~~~~~l~tg~~d~~v~  173 (176)
                      ..+..-++....+|.|.
T Consensus       306 ~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         306 HEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             ETTTTEEEEEETTSEEE
T ss_pred             CCCCceEEEECCCCeEE
Confidence            66655666666777764

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.09  E-value=7.3  Score=26.97  Aligned_cols=66  Identities=8%  Similarity=0.007  Sum_probs=46.5

Q ss_pred             cCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCeeeeEecCCCCCeeEEEEccCCcEEEEeeCCCcE
Q psy15417         21 GDVMSLSLAPDMRTFVSGACDASAKLWDIRDGSCKQTFPGHESDINAVTFFPNGWAFATGSDDATC   86 (176)
Q Consensus        21 ~~V~~~~~~~~~~~l~s~s~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~s~d~~i   86 (176)
                      +--.++..++.-..++.-+.-|.+.+||+.++.++..-+--..+|-..+-..+..-++...+.|.+
T Consensus       256 DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqV  321 (327)
T d1utca2         256 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV  321 (327)
T ss_dssp             CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEE
T ss_pred             CcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeE
Confidence            334467777766777777888999999999999887766666666655555555556666665554