Psyllid ID: psy15442

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------60
MWYMVPGATKLHNLISKLKKWIKILEAKNKLLPKSCLIEEKCRYLSNFNLHTAEIELPGEYLLPKHSHYYVRISSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQVSTTTTTKMVYISLLYCLGSPASSQVMCDILRDIQSKLIPRTMLKHWALHTFLSATDYWTFRKMVSSFFGQNLHHHFRVPGKKTFWISPSMGSDRQTDTEANNIVCSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELPIVRYYDRLGTLQSRGNMTLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNSNRPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKKVKCSYLPIIINFQNREMGGKLEKYPFWGPLIPQN
ccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEcccccccccccccEEEEcccccHHHHcccccccEEEEEccEEEEEEcccccEEEEEEEEcccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEcEEEccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccEEEEEEccccccEEEEEEEcccccccEEEEccccccccHHHHHHHHHHHHHHHHHHccHHHccccccccccEEEEccccccEEEEcccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcccccccEEEEEccccEEEEcccccccccccccccccHHHHHHHcccccccccHHHHHHHHHHHccccHHHHHHHHHHHccccccccHHcccccccccccHHHHHHHHccccccccccccccc
cEEEccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHccccHHHccccccEEEcccccccccccccEEEEcccEEEEEEEccccEEEEccccccEEEEEccccccEEEEEEcccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccHHHccccEEEccEEEEcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccEEcccccccccccccHccccccccccEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccHHHHHcccEEEcccEEEccccccEEcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccHHHHHcccccccHHHHHHHHHHcccHHHcHHHHHHHHHHHccEEEcccccccccEEEccccEEEccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHcHHHccccccccccccc
mwymvpgatkLHNLISKLKKWIKILEAKnkllpksclieekcrYLSNFNLhtaeielpgeyllpkhshyyvrisspiseLRMIHKVYSILFYrfmprvdivEKHNTAARRLYIRghngkiypylvmndsglsdsrRDERVLQLLRMLNHYLAKQVSTTTTTKMVYISLLYclgspassqVMCDILRDIQSKLIPRTMLKHWALHTFLSATDYWTFRKMVSSffgqnlhhhfrvpgkktfwispsmgsdrqtdteannivcspiselRMIHKVYSILFYrfmprvdivEKHNTAARRLYIRghngkiypylvmndsglsdsrRDERVLQLLRMLNHYLAKQKETSKrflhftvprvvpvsaqlrlvednpaslsLLDIYKTScsqikidyelpiVRYYDRlgtlqsrgNMTLQLALACFAEYVLHLtrlnpdmmylhrdcgllnvsyfkfdiddskgefnnsrlefenLSDSAKEIFRQKnlsevysnvdgAGVIIIIILgelnsnrpvpfrltpNIMEFLTdigvdgpltASIIATARCLVQPNFQVHAILKAILRDEMIAIQKKVKCSYLPIIINFqnremggklekypfwgplipqn
mwymvpgatKLHNLISKLKKWIKILEAKNKLLPKSCLIEEKCRYLSNFNLHTAEIELPGEYLLPKHSHYYVRISSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYirghngkiypyLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQVSTTTTTKMVYISLLYCLGSPASSQVMCDILRDIQSKLIPRTMLKHWALHTFLSATDYWTFRKMVSSFFGQNLHHHFRVPGKKTFWISPSMgsdrqtdteannivcspiselrmIHKVYSILFYRFMPRVDIVEKHNTAARRLYirghngkiypyLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELPIVRYYDRLGTLQSRGNMTLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLsevysnvdGAGVIIIIILgelnsnrpVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKKVKCSYLPIIINFqnremggklekypfwgplipqn
MWYMVPGATKLHNlisklkkwikilEAKNKLLPKSCLIEEKCRYLSNFNLHTAEIELPGEYLLPKHSHYYVRISSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQVSTTTTTKMVYISLLYCLGSPASSQVMCDILRDIQSKLIPRTMLKHWALHTFLSATDYWTFRKMVSSFFGQNLHHHFRVPGKKTFWISPSMGSDRQTDTEANNIVCSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELPIVRYYDRLGTLQSRGNMTLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNSNRPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKKVKCSYLPIIINFQNREMGGKLEKYPFWGPLIPQN
*WYMVPGATKLHNLISKLKKWIKILEAKNKLLPKSCLIEEKCRYLSNFNLHTAEIELPGEYLLPKHSHYYVRISSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGL*****DERVLQLLRMLNHYLAKQVSTTTTTKMVYISLLYCLGSPASSQVMCDILRDIQSKLIPRTMLKHWALHTFLSATDYWTFRKMVSSFFGQNLHHHFRVPGKKTFWIS************ANNIVCSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGL******ERVLQLLRMLNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELPIVRYYDRLGTLQSRGNMTLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDS*******************EIFRQKNLSEVYSNVDGAGVIIIIILGELNSNRPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKKVKCSYLPIIINFQNREMGGKLEKYPFWGPLI***
*W*****ATKLHNLISKLKKWIKILEAKNKLLPKSCLIEEKCRYLSNFNLHTAEIELPGEYLLPKHSHYYVRISSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQVSTTTTTKMVYISLLY*********VMCDILRDIQSKLIPRTMLKHWALHTFLSATDYWTFRKMVSSFFGQNLHHHFRVPGKKTFWI**S******TDTE*NNIVCSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELPIVRYYDRLGTLQ*******QLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNSNRPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIA**************************KYPFWGPLI***
MWYMVPGATKLHNLISKLKKWIKILEAKNKLLPKSCLIEEKCRYLSNFNLHTAEIELPGEYLLPKHSHYYVRISSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQVSTTTTTKMVYISLLYCLGSPASSQVMCDILRDIQSKLIPRTMLKHWALHTFLSATDYWTFRKMVSSFFGQNLHHHFRVPGKKTFWISPSMGSDRQTDTEANNIVCSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELPIVRYYDRLGTLQSRGNMTLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNSNRPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKKVKCSYLPIIINFQNREMGGKLEKYPFWGPLIPQN
MWYMVPGATKLHNLISKLKKWIKILEAKNKLLPKSCLIEEKCRYLSNFNLHTAEIELPGEYLLPKHSHYYVRISSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQVSTTTTTKMVYISLLYCLGSPASSQVMCDILRDIQSKLIPRTMLKHWALHTFLSATDYWTFRKMVSSFFGQNLHHHFRVPGKKTFWISPSMGSDRQTDTEANNIVCSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELPIVRYYDRLGTLQSRGNMTLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNSNRPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKKVK***L***INFQNREMGGKLEKYPFWGPL****
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MWYMVPGATKLHNLISKLKKWIKILEAKNKLLPKSCLIEEKCRYLSNFNLHTAEIELPGEYLLPKHSHYYVRISSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQVSTTTTTKMVYISLLYCLGSPASSQVMCDILRDIQSKLIPRTMLKHWALHTFLSATDYWTFRKMVSSFFGQNLHHHFRVPGKKTFWISPSMGSDRQTDTEANNIVCSPISELRMIHKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELPIVRYYDRLGTLQSRGNMTLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNSNRPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKKVKCSYLPIIINFQNREMGGKLEKYPFWGPLIPQN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query599 2.2.26 [Sep-21-2011]
Q9Y4A53859 Transformation/transcript yes N/A 0.419 0.065 0.513 1e-87
Q8I8U73803 Transcription-associated no N/A 0.415 0.065 0.489 1e-87
Q80YV32565 Transformation/transcript no N/A 0.419 0.097 0.507 7e-87
Q100643655 Uncharacterized PI3/PI4-k yes N/A 0.457 0.074 0.266 1e-22
Q9HFE83699 Transcription-associated no N/A 0.166 0.027 0.435 1e-17
P388113744 Transcription-associated yes N/A 0.196 0.031 0.352 6e-15
P973134128 DNA-dependent protein kin no N/A 0.205 0.029 0.3 1e-08
P785274128 DNA-dependent protein kin no N/A 0.186 0.027 0.308 2e-07
Q8WN224144 DNA-dependent protein kin no N/A 0.181 0.026 0.290 1e-05
Q9Y7K22337 Phosphatidylinositol 3-ki no N/A 0.208 0.053 0.328 3e-05
>sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein OS=Homo sapiens GN=TRRAP PE=1 SV=3 Back     alignment and function desciption
 Score =  324 bits (831), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 174/339 (51%), Positives = 212/339 (62%), Gaps = 88/339 (25%)

Query: 273  YSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRM 332
            Y I   RFMPRV+IV+KHNTAARRLYIRGHNGKIYPYLVMND+ L++SRR+ERVLQLLR+
Sbjct: 3492 YYIKIARFMPRVEIVQKHNTAARRLYIRGHNGKIYPYLVMNDACLTESRREERVLQLLRL 3551

Query: 333  LNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELP 392
            LN  L K+KET+KR L FTVPRVV VS Q+RLVEDNP+SLSL++IYK  C++  I+++ P
Sbjct: 3552 LNPCLEKRKETTKRHLFFTVPRVVAVSPQMRLVEDNPSSLSLVEIYKQRCAKKGIEHDNP 3611

Query: 393  IVRYYDRLGTLQSRG-----------------NM-------------------------- 409
            I RYYDRL T+Q+RG                 NM                          
Sbjct: 3612 ISRYYDRLATVQARGTQASHQVLRDILKEVQSNMVPRSMLKEWALHTFPNATDYWTFRKM 3671

Query: 410  -TLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENL 468
             T+QLAL  FAE+VLHL RLNP+M+ + +D G LNV+YF+FDI+D+ G            
Sbjct: 3672 FTIQLALIGFAEFVLHLNRLNPEMLQIAQDTGKLNVAYFRFDINDATG------------ 3719

Query: 469  SDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNSNRPVPFRLTPNIMEFLTDIGVDGP 528
                                            +L++NRPVPFRLTPNI EFLT IGV GP
Sbjct: 3720 --------------------------------DLDANRPVPFRLTPNISEFLTTIGVSGP 3747

Query: 529  LTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKKVK 567
            LTAS+IA ARC  QPNF+V  ILK +LRDE+IA  KK +
Sbjct: 3748 LTASMIAVARCFAQPNFKVDGILKTVLRDEIIAWHKKTQ 3786
Adapter protein, which is found in various multiprotein chromatin complexes with histone acetyltransferase activity (HAT), which gives a specific tag for epigenetic transcription activation. Component of the NuA4 histone acetyltransferase complex which is responsible for acetylation of nucleosomal histones H4 and H2A. Plays a central role in MYC transcription activation, and also participates in cell transformation by MYC. Required for p53/TP53-, E2F1- and E2F4-mediated transcription activation. Also involved in transcription activation mediated by the adenovirus E1A, a viral oncoprotein that deregulates transcription of key genes. Probably acts by linking transcription factors such as E1A, MYC or E2F1 to HAT complexes such as STAGA thereby allowing transcription activation. Probably not required in the steps following histone acetylation in processes of transcription activation. May be required for the mitotic checkpoint and normal cell cycle progression.
Homo sapiens (taxid: 9606)
>sp|Q8I8U7|TRA1_DROME Transcription-associated protein 1 OS=Drosophila melanogaster GN=Nipped-A PE=1 SV=3 Back     alignment and function description
>sp|Q80YV3|TRRAP_MOUSE Transformation/transcription domain-associated protein OS=Mus musculus GN=Trrap PE=1 SV=2 Back     alignment and function description
>sp|Q10064|YAMB_SCHPO Uncharacterized PI3/PI4-kinase family protein C1F5.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F5.11c PE=3 SV=1 Back     alignment and function description
>sp|Q9HFE8|TRA1_SCHPO Transcription-associated protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tra1 PE=3 SV=1 Back     alignment and function description
>sp|P38811|TRA1_YEAST Transcription-associated protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRA1 PE=1 SV=1 Back     alignment and function description
>sp|P97313|PRKDC_MOUSE DNA-dependent protein kinase catalytic subunit OS=Mus musculus GN=Prkdc PE=1 SV=3 Back     alignment and function description
>sp|P78527|PRKDC_HUMAN DNA-dependent protein kinase catalytic subunit OS=Homo sapiens GN=PRKDC PE=1 SV=3 Back     alignment and function description
>sp|Q8WN22|PRKDC_CANFA DNA-dependent protein kinase catalytic subunit OS=Canis familiaris GN=PRKDC PE=2 SV=1 Back     alignment and function description
>sp|Q9Y7K2|TOR2_SCHPO Phosphatidylinositol 3-kinase tor2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tor2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query599
383854902 3780 PREDICTED: transformation/transcription 0.420 0.066 0.55 1e-100
383854900 3785 PREDICTED: transformation/transcription 0.420 0.066 0.55 1e-100
345480161 3803 PREDICTED: transformation/transcription 0.420 0.066 0.547 1e-99
380021027 3782 PREDICTED: LOW QUALITY PROTEIN: transfor 0.420 0.066 0.547 1e-99
350397835 3783 PREDICTED: transformation/transcription 0.420 0.066 0.547 2e-99
340724340 3783 PREDICTED: transformation/transcription 0.420 0.066 0.547 2e-99
66523982 3782 PREDICTED: transformation/transcription 0.420 0.066 0.544 5e-99
307170585 3826 Transformation/transcription domain-asso 0.420 0.065 0.529 4e-97
170055080 3927 transcription-associated protein 1 [Cule 0.420 0.064 0.544 3e-96
322792873 3750 hypothetical protein SINV_11613 [Solenop 0.420 0.067 0.529 7e-96
>gi|383854902|ref|XP_003702959.1| PREDICTED: transformation/transcription domain-associated protein isoform 2 [Megachile rotundata] Back     alignment and taxonomy information
 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/340 (55%), Positives = 224/340 (65%), Gaps = 88/340 (25%)

Query: 270  HKVYSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQL 329
            H  Y +   RFMPRV++V++HNTAARRL IRGHNG++YPYLV+ND+GL D+RR+ERVLQL
Sbjct: 3413 HSHYYVRIARFMPRVEVVQRHNTAARRLRIRGHNGRLYPYLVVNDAGLGDARREERVLQL 3472

Query: 330  LRMLNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDY 389
            LRMLNHYLAKQKETS+RFLHFTVPRVV VS Q+RLVEDNPAS+SLLDIYK  C+++ I++
Sbjct: 3473 LRMLNHYLAKQKETSRRFLHFTVPRVVAVSPQMRLVEDNPASVSLLDIYKQGCAKLGIEH 3532

Query: 390  ELPIVRYYDRLGTLQSRGN----------------------------------------- 408
            + PI RYYDRL T+Q+RG                                          
Sbjct: 3533 DAPIARYYDRLATVQARGAQASHQVLRDILKEVQTTMVSKTMLKDWAVKTFPGATDYWTF 3592

Query: 409  ---MTLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEF 465
                TLQL+LACFAEYVLHLTRLNPDMMY+H+D GL+N++YFKFD+DD+ GE        
Sbjct: 3593 RKMFTLQLSLACFAEYVLHLTRLNPDMMYVHQDSGLINIAYFKFDVDDTSGE-------- 3644

Query: 466  ENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNSNRPVPFRLTPNIMEFLTDIGV 525
                                                L++NRPVPFRLTPNI+EFLT  GV
Sbjct: 3645 ------------------------------------LDANRPVPFRLTPNILEFLTSTGV 3668

Query: 526  DGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKK 565
             GPLTAS IATARCLVQP+F+VH IL+AILRDE+IA   K
Sbjct: 3669 SGPLTASAIATARCLVQPSFKVHTILRAILRDEVIADHNK 3708

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|383854900|ref|XP_003702958.1| PREDICTED: transformation/transcription domain-associated protein isoform 1 [Megachile rotundata] Back     alignment and taxonomy information
>gi|345480161|ref|XP_001607204.2| PREDICTED: transformation/transcription domain-associated protein-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|380021027|ref|XP_003694376.1| PREDICTED: LOW QUALITY PROTEIN: transformation/transcription domain-associated protein-like [Apis florea] Back     alignment and taxonomy information
>gi|350397835|ref|XP_003485007.1| PREDICTED: transformation/transcription domain-associated protein-like isoform 1 [Bombus impatiens] gi|350397846|ref|XP_003485008.1| PREDICTED: transformation/transcription domain-associated protein-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340724340|ref|XP_003400540.1| PREDICTED: transformation/transcription domain-associated protein-like isoform 1 [Bombus terrestris] gi|340724342|ref|XP_003400541.1| PREDICTED: transformation/transcription domain-associated protein-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|66523982|ref|XP_393981.2| PREDICTED: transformation/transcription domain-associated protein isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|307170585|gb|EFN62779.1| Transformation/transcription domain-associated protein [Camponotus floridanus] Back     alignment and taxonomy information
>gi|170055080|ref|XP_001863421.1| transcription-associated protein 1 [Culex quinquefasciatus] gi|167875165|gb|EDS38548.1| transcription-associated protein 1 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|322792873|gb|EFZ16706.1| hypothetical protein SINV_11613 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query599
UNIPROTKB|H0Y4W23588 TRRAP "Transformation/transcri 0.480 0.080 0.533 9.9e-87
UNIPROTKB|E1BKJ53831 TRRAP "Uncharacterized protein 0.480 0.075 0.533 1.2e-86
UNIPROTKB|J9NV053847 TRRAP "Uncharacterized protein 0.480 0.074 0.533 1.2e-86
UNIPROTKB|F2Z2U43847 TRRAP "Transformation/transcri 0.480 0.074 0.533 1.2e-86
UNIPROTKB|Q9Y4A53859 TRRAP "Transformation/transcri 0.480 0.074 0.533 1.2e-86
UNIPROTKB|E2RJS83861 TRRAP "Uncharacterized protein 0.480 0.074 0.533 1.2e-86
MGI|MGI:21532722565 Trrap "transformation/transcri 0.480 0.112 0.526 1.6e-86
RGD|13054463848 Trrap "transformation/transcri 0.480 0.074 0.529 2.5e-86
UNIPROTKB|E1BRF23815 TRRAP "Uncharacterized protein 0.480 0.075 0.529 3.1e-86
UNIPROTKB|E1C7963819 TRRAP "Uncharacterized protein 0.480 0.075 0.529 3.1e-86
UNIPROTKB|H0Y4W2 TRRAP "Transformation/transcription domain-associated protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 704 (252.9 bits), Expect = 9.9e-87, Sum P(2) = 9.9e-87
 Identities = 161/302 (53%), Positives = 199/302 (65%)

Query:   273 YSILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRM 332
             Y I   RFMPRV+IV+KHNTAARRLYIRGHNGKIYPYLVMND+ L++SRR+ERVLQLLR+
Sbjct:  3221 YYIKIARFMPRVEIVQKHNTAARRLYIRGHNGKIYPYLVMNDACLTESRREERVLQLLRL 3280

Query:   333 LNHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELP 392
             LN  L K+KET+KR L FTVPRVV VS Q+RLVEDNP+SLSL++IYK  C++  I+++ P
Sbjct:  3281 LNPCLEKRKETTKRHLFFTVPRVVAVSPQMRLVEDNPSSLSLVEIYKQRCAKKGIEHDNP 3340

Query:   393 IVRYYDRLGTLQSRGNMTLQLALACFAEYVLHLTRLNPDMMY----LHRDCGLLNVSYFK 448
             I RYYDRL T+Q+RG       L    + V   + + P  M     LH      +   F+
Sbjct:  3341 ISRYYDRLATVQARGTQASHQVLRDILKEVQ--SNMVPRSMLKEWALHTFPNATDYWTFR 3398

Query:   449 --FDIDDSKGEFNNSRLEFENLSDSAKEIFRQKN-LSEVYSNVDGAGVIIIIILGELNSN 505
               F I  +   F    L    L+    +I +    L+  Y   D     I    G+L++N
Sbjct:  3399 KMFTIQLALIGFAEFVLHLNRLNPEMLQIAQDTGKLNVAYFRFD-----INDATGDLDAN 3453

Query:   506 RPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKK 565
             RPVPFRLTPNI EFLT IGV GPLTAS+IA ARC  QPNF+V  ILK +LRDE+IA  KK
Sbjct:  3454 RPVPFRLTPNISEFLTTIGVSGPLTASMIAVARCFAQPNFKVDGILKTVLRDEIIAWHKK 3513

Query:   566 VK 567
              +
Sbjct:  3514 TQ 3515
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0005634 "nucleus" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
UNIPROTKB|E1BKJ5 TRRAP "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9NV05 TRRAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z2U4 TRRAP "Transformation/transcription domain-associated protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y4A5 TRRAP "Transformation/transcription domain-associated protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RJS8 TRRAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2153272 Trrap "transformation/transcription domain-associated protein" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305446 Trrap "transformation/transcription domain-associated protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BRF2 TRRAP "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C796 TRRAP "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9Y4A5TRRAP_HUMANNo assigned EC number0.51320.41900.0650yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query599
cd05163253 cd05163, TRRAP, TRansformation/tRanscription domai 8e-73
cd05163253 cd05163, TRRAP, TRansformation/tRanscription domai 1e-33
cd00142219 cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI 9e-28
COG50322105 COG5032, TEL1, Phosphatidylinositol kinase and pro 1e-22
smart00146240 smart00146, PI3Kc, Phosphoinositide 3-kinase, cata 7e-13
cd05164222 cd05164, PIKKc, Phosphoinositide 3-kinase-related 1e-12
COG50322105 COG5032, TEL1, Phosphatidylinositol kinase and pro 1e-11
cd00142219 cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI 4e-10
cd05169280 cd05169, PIKKc_TOR, TOR (Target of rapamycin), cat 1e-08
cd05172235 cd05172, PIKKc_DNA-PK, DNA-dependent protein kinas 3e-08
cd00892237 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and 2e-07
cd05170307 cd05170, PIKKc_SMG1, Suppressor of morphogenetic e 1e-06
cd05169280 cd05169, PIKKc_TOR, TOR (Target of rapamycin), cat 5e-05
cd05164222 cd05164, PIKKc, Phosphoinositide 3-kinase-related 9e-05
cd05172235 cd05172, PIKKc_DNA-PK, DNA-dependent protein kinas 4e-04
cd00892237 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and 4e-04
cd00892237 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and 0.001
cd05170307 cd05170, PIKKc_SMG1, Suppressor of morphogenetic e 0.001
pfam00454233 pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- 0.003
>gnl|CDD|119423 cd05163, TRRAP, TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information 
 Score =  233 bits (597), Expect = 8e-73
 Identities = 111/300 (37%), Positives = 151/300 (50%), Gaps = 63/300 (21%)

Query: 279 RFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLA 338
           RF+P V+IV  H    RRL IRGH+G IYP+LV   +    +RR+ERVLQL R LN  L+
Sbjct: 3   RFLPTVEIVRGHGYCYRRLTIRGHDGSIYPFLVQYPAARQ-ARREERVLQLFRTLNSVLS 61

Query: 339 KQKETSKRFLHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYE------LP 392
           K KET +R L FT+P VVP+S Q+RLVED+P+ +SL +IY+         Y       +P
Sbjct: 62  KNKETRRRNLQFTLPLVVPLSPQIRLVEDDPSYISLQEIYE----DKLEIYNEIQKDMVP 117

Query: 393 IVRYYD----RLGTLQS----RGNMTLQLALACFAEYVLHLTRLNPDMMYLHRDCGLLNV 444
                +       T Q     R   T QLAL  F  Y+L +   NPD +++ RD G +  
Sbjct: 118 DTILKNYILSTFPTYQDYWLFRKQFTYQLALLSFMTYILSINNRNPDKIFISRDTGNVYQ 177

Query: 445 SYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNS 504
           S     I+++K  F+N                                            
Sbjct: 178 SDLLPSINNNKPLFHN-------------------------------------------- 193

Query: 505 NRPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQK 564
           N PVPFRLTPNI   +  IG++G LT+S++A ARCL +P F +   L+  +RDE+IA  K
Sbjct: 194 NEPVPFRLTPNIQHLIGPIGLEGILTSSMMAIARCLTEPEFDLENALQLFIRDELIAWHK 253

TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replication, and DNA repair. TRRAP also exists in non-HAT complexes such as the p400 and MRN complexes, which are implicated in ATP-dependent remodeling and DNA repair, respectively. Length = 253
>gnl|CDD|119423 cd05163, TRRAP, TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119416 cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|227365 COG5032, TEL1, Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] Back     alignment and domain information
>gnl|CDD|214538 smart00146, PI3Kc, Phosphoinositide 3-kinase, catalytic domain Back     alignment and domain information
>gnl|CDD|119424 cd05164, PIKKc, Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|227365 COG5032, TEL1, Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] Back     alignment and domain information
>gnl|CDD|119416 cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119429 cd05169, PIKKc_TOR, TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119432 cd05172, PIKKc_DNA-PK, DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119418 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119430 cd05170, PIKKc_SMG1, Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119429 cd05169, PIKKc_TOR, TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119424 cd05164, PIKKc, Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119432 cd05172, PIKKc_DNA-PK, DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119418 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119418 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|119430 cd05170, PIKKc_SMG1, Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>gnl|CDD|189554 pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- and 4-kinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 599
cd05163253 TRRAP TRansformation/tRanscription domain-Associat 100.0
cd05170307 PIKKc_SMG1 Suppressor of morphogenetic effect on g 100.0
cd05169280 PIKKc_TOR TOR (Target of rapamycin), catalytic dom 100.0
cd05171279 PIKKc_ATM Ataxia telangiectasia mutated (ATM), cat 100.0
cd05172235 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK) 100.0
cd00892237 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-rela 100.0
KOG0890|consensus2382 100.0
cd05164222 PIKKc Phosphoinositide 3-kinase-related protein ki 100.0
COG50322105 TEL1 Phosphatidylinositol kinase and protein kinas 100.0
cd00142219 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like f 100.0
KOG0889|consensus3550 100.0
KOG0892|consensus2806 100.0
smart00146202 PI3Kc Phosphoinositide 3-kinase, catalytic domain. 100.0
cd00891352 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic 100.0
cd00896350 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class 100.0
cd05166353 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class I 100.0
cd05165366 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, 100.0
PF00454235 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kina 100.0
cd05168293 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), T 100.0
cd05177354 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), c 100.0
cd05174361 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), c 100.0
cd00894365 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), c 100.0
cd05173362 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), cl 100.0
cd00893289 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type I 100.0
cd05176353 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), c 100.0
cd05167311 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), 100.0
cd00895354 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), cl 100.0
cd05175366 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), c 100.0
KOG0891|consensus2341 100.0
cd05163253 TRRAP TRansformation/tRanscription domain-Associat 99.97
KOG0905|consensus 1639 99.96
KOG0906|consensus843 99.95
KOG0904|consensus1076 99.94
cd05170307 PIKKc_SMG1 Suppressor of morphogenetic effect on g 99.93
cd05171279 PIKKc_ATM Ataxia telangiectasia mutated (ATM), cat 99.93
cd05169280 PIKKc_TOR TOR (Target of rapamycin), catalytic dom 99.92
cd05172235 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK) 99.89
cd05164222 PIKKc Phosphoinositide 3-kinase-related protein ki 99.88
KOG0903|consensus847 99.87
cd00892237 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-rela 99.87
PTZ003031374 phosphatidylinositol kinase; Provisional 99.84
KOG0902|consensus1803 99.82
KOG0891|consensus2341 99.81
KOG0890|consensus2382 99.79
cd00142219 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like f 99.77
KOG0892|consensus2806 99.6
cd05166353 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class I 99.5
cd00891352 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic 99.48
PF00454235 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kina 99.47
smart00146202 PI3Kc Phosphoinositide 3-kinase, catalytic domain. 99.46
cd00896350 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class 99.38
cd05165366 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, 99.35
cd05174361 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), c 99.3
cd05177354 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), c 99.28
cd05173362 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), cl 99.28
cd05176353 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), c 99.24
KOG0889|consensus3550 99.22
COG50322105 TEL1 Phosphatidylinositol kinase and protein kinas 99.2
cd00894365 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), c 99.17
cd05168293 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), T 99.14
cd00895354 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), cl 98.98
cd05167311 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), 98.85
cd05175366 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), c 98.8
cd00893289 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type I 98.79
KOG0906|consensus843 97.17
KOG0905|consensus1639 96.57
PTZ003031374 phosphatidylinositol kinase; Provisional 94.87
KOG0904|consensus1076 93.21
PF13575370 DUF4135: Domain of unknown function (DUF4135) 86.53
>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information 
Probab=100.00  E-value=3.6e-62  Score=497.30  Aligned_cols=243  Identities=44%  Similarity=0.732  Sum_probs=213.6

Q ss_pred             EEEEeceEEEeeccccceeEEEEEecCCceeceEeecCCCCccchhhHHHHHHHHHHHHHHhcCccccccCceeccceEE
Q psy15442        277 FYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQKETSKRFLHFTVPRVV  356 (599)
Q Consensus       277 i~~f~~~v~v~~~s~~~pkri~i~GsdG~~y~flvk~~kg~~dlR~DeRi~Ql~~l~N~iL~~~~etr~R~L~~~~y~Vi  356 (599)
                      |++|.|+|+++.+++++||||+|+|+||+.|+||||.+ +++|+|+|||+|||++++|++|.+++||++|+|.+++|.||
T Consensus         1 i~rf~p~~~iv~~~~~~pkri~i~gsdG~~y~fLvk~~-~~~d~R~d~Ri~Ql~~liN~~l~~~~et~~r~l~i~~y~vi   79 (253)
T cd05163           1 IERFLPTVEIVRGHGYCYRRLTIRGHDGSIYPFLVQYP-AARQARREERVLQLFRTLNSVLSKNKETRRRNLQFTLPLVV   79 (253)
T ss_pred             CcccCCeEEEEccCCCcCcEEEEECCCCCEEEEEEecC-CchhHHHHHHHHHHHHHHHHHHhcCHHHHhCcccccceeEE
Confidence            57999999999999999999999999999999999984 46999999999999999999999999999999999999999


Q ss_pred             ecCCCceeEEeCCCCccHHHHHHHhhhh-----hCCCCCCcHHHHH-HHhh----hhhhHhhHHHhHhHHHHHHHHhcCC
Q psy15442        357 PVSAQLRLVEDNPASLSLLDIYKTSCSQ-----IKIDYELPIVRYY-DRLG----TLQSRGNMTLQLALACFAEYVLHLT  426 (599)
Q Consensus       357 PLs~~~gLIE~v~~~~tL~~i~~~~~~~-----~g~~~d~pi~~~~-~kl~----~~q~r~~Ft~slA~~S~~~Yilglg  426 (599)
                      ||++++|||||++++.||+++|++....     ...-++.-+..|+ ++..    ++.+|++||.|+|++|++|||+|+|
T Consensus        80 PLs~~~gLie~~~~~~tl~~i~~~~~~~~~~i~~~~~p~~~l~~~~~~~~~~~~~~~~~r~~ft~s~A~~s~~gYilglg  159 (253)
T cd05163          80 PLSPQIRLVEDDPSYISLQEIYEDKLEIYNEIQKDMVPDTILKNYILSTFPTYQDYWLFRKQFTYQLALLSFMTYILSIN  159 (253)
T ss_pred             EcCCccceEEECCCCccHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999752111     0112222233333 3332    3568999999999999999999999


Q ss_pred             CCCCCceeEEcCCCceeeeeeeeeccCccccccccchhhhcccchhHHHHhhhcccccccccCCCchhhhhhhccCCCCC
Q psy15442        427 RLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELNSNR  506 (599)
Q Consensus       427 DRhp~nIll~~~tG~v~~~~~hiDf~~~~g~~~~~~~~Fe~~~~~~~~~~~~k~~~~~~~~~d~~g~~~~~~~~~l~~pE  506 (599)
                      ||||+|||++..||+|    +||||+++          |++                      ++        ..+++||
T Consensus       160 dRh~~nili~~~tG~v----~hiDf~~~----------f~~----------------------~~--------~~~~~pE  195 (253)
T cd05163         160 NRNPDKIFISRDTGNV----YQSDLLPS----------INN----------------------NK--------PLFHNNE  195 (253)
T ss_pred             CCCchhEEEEcCCCcE----EEEeeeee----------ecC----------------------CC--------cCCCCCC
Confidence            9999999999999999    99999976          332                      11        1347999


Q ss_pred             CCcccccHHHHHHhccCCCCcccHHHHHHHHHHhcCCchhHHHHHHHHhccchhhhhh
Q psy15442        507 PVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEMIAIQK  564 (599)
Q Consensus       507 ~VPFRLT~Ni~~~lg~~gveG~F~~~~~~~~~~L~~~~~~l~~~L~~fl~Dpl~~W~~  564 (599)
                      .|||||||||+++||++|+||+|+.+|+++++||+++++.|+++|++|++||+++|++
T Consensus       196 ~VPFRLT~ni~~~~g~~g~eG~f~~~~~~~~~~Lr~~~~~l~~~L~~fi~Dpl~~W~~  253 (253)
T cd05163         196 PVPFRLTPNIQHLIGPIGLEGILTSSMMAIARCLTEPEFDLENALQLFIRDELIAWHK  253 (253)
T ss_pred             cCCcccCHHHHHHhCCcCcCCcHHHHHHHHHHHHhcCHHHHHHHHHHHHcChhhhhcC
Confidence            9999999999999999999999999999999999999999999999999999999974

TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replicat
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>KOG0890|consensus Back     alignment and domain information
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] Back     alignment and domain information
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>KOG0889|consensus Back     alignment and domain information
>KOG0892|consensus Back     alignment and domain information
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain Back     alignment and domain information
>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>KOG0891|consensus Back     alignment and domain information
>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>KOG0905|consensus Back     alignment and domain information
>KOG0906|consensus Back     alignment and domain information
>KOG0904|consensus Back     alignment and domain information
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>KOG0903|consensus Back     alignment and domain information
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>PTZ00303 phosphatidylinositol kinase; Provisional Back     alignment and domain information
>KOG0902|consensus Back     alignment and domain information
>KOG0891|consensus Back     alignment and domain information
>KOG0890|consensus Back     alignment and domain information
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>KOG0892|consensus Back     alignment and domain information
>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain Back     alignment and domain information
>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>KOG0889|consensus Back     alignment and domain information
>COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] Back     alignment and domain information
>cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases Back     alignment and domain information
>KOG0906|consensus Back     alignment and domain information
>KOG0905|consensus Back     alignment and domain information
>PTZ00303 phosphatidylinositol kinase; Provisional Back     alignment and domain information
>KOG0904|consensus Back     alignment and domain information
>PF13575 DUF4135: Domain of unknown function (DUF4135) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query599
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 67.2 bits (163), Expect = 1e-11
 Identities = 84/605 (13%), Positives = 175/605 (28%), Gaps = 175/605 (28%)

Query: 1   MWYMVPGATKLH----NLISKLKKWIKILEAKNKLLP-------KSCLIEEKCRYLSNFN 49
           ++       K +        KL++ +  L     +L        K+ +  + C       
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS----- 173

Query: 50  LHTAEIELPGEYLLPKHSHYYVRIS---SPISELRMIHKVYSILFYRFMPRVDIVE--KH 104
            +  + ++  +        +++ +    SP + L M+ K+   +   +  R D     K 
Sbjct: 174 -YKVQCKMDFKI-------FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225

Query: 105 NTAARRLYIRGH-NGKIYP--YLVMNDSGLSDSRRDERVLQLL----RML----NHYLAK 153
              + +  +R     K Y    LV+ +       ++ +         ++L       +  
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNV------QNAKAWNAFNLSCKILLTTRFKQVTD 279

Query: 154 QVSTTTTTKMVYISLLYCLGSPASSQVMCDILRDIQSKLIPRTMLKHWALHTFLSATDYW 213
            +S  TTT +        L       ++   L D + + +PR +L               
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-DCRPQDLPREVLTTNPRRL-------- 330

Query: 214 TFRKMVSSFFGQNLHHHFRVPGKKTFWISPSMGSDRQTDTEANNIVCSPISELRMIHKVY 273
                  S   +++            W    +  D+ T    +++     +E R +    
Sbjct: 331 -------SIIAESIRDG---LATWDNW--KHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378

Query: 274 SILFYRFMPRVDIVEKHNTAARRLYIRGHNGKIYPYLVMNDSGLSDSRRDERVLQLLRML 333
           S+    F P   I                     P                 +L L+   
Sbjct: 379 SV----FPPSAHI---------------------P---------------TILLSLI--- 395

Query: 334 NHYLAKQKETSKRFLHFTVPRVVPVSAQLRLVEDNPA--SLSLLDIYKTSCSQIKIDYEL 391
             +    K      ++           +  LVE  P   ++S+  IY     +++ +Y L
Sbjct: 396 --WFDVIKSDVMVVVNK--------LHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL 445

Query: 392 --PIVRYYDRLGTLQSRGNMTLQLALACFAEYVLHLTRLNPDM-MYLHRDCGLLNVSY-- 446
              IV +Y+   T  S                   L     D   Y H       + +  
Sbjct: 446 HRSIVDHYNIPKTFDSD-----------------DLIPPYLDQYFYSH-------IGHHL 481

Query: 447 FKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIIILGELN--- 503
              +  +    F    L+F          F ++ +    +  + +G I+   L +L    
Sbjct: 482 KNIEHPERMTLFRMVFLDFR---------FLEQKIRHDSTAWNASGSILNT-LQQLKFYK 531

Query: 504 ----SNRPVPFRLTPNIMEFLTDIGVDGPLTASIIATARCLVQPNFQVHAILKAILRDEM 559
                N P   RL   I++FL  I         I +    L++         +AI  +  
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIE-----ENLICSKYTDLLRIALMAED--EAIFEEAH 584

Query: 560 IAIQK 564
             +Q+
Sbjct: 585 KQVQR 589
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query599
2x6h_A696 GH13170P, VPS34, phosphotidylinositol 3 kinase 59F 100.0
3ls8_A614 Phosphatidylinositol 3-kinase catalytic subunit ty 100.0
1e7u_A961 Phosphatidylinositol 3-kinase catalytic subunit; p 100.0
2y3a_A1092 Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca 100.0
2wxf_A940 Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca 100.0
3hhm_A1091 Phosphatidylinositol-4,5-bisphosphate 3-kinase cat 100.0
1e7u_A961 Phosphatidylinositol 3-kinase catalytic subunit; p 99.71
2x6h_A696 GH13170P, VPS34, phosphotidylinositol 3 kinase 59F 99.7
3ls8_A614 Phosphatidylinositol 3-kinase catalytic subunit ty 99.65
2y3a_A1092 Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca 99.64
2wxf_A940 Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca 99.61
3hhm_A1091 Phosphatidylinositol-4,5-bisphosphate 3-kinase cat 99.46
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A* Back     alignment and structure
Probab=100.00  E-value=1.5e-47  Score=433.15  Aligned_cols=229  Identities=15%  Similarity=0.214  Sum_probs=203.5

Q ss_pred             cccceEEEEEEece-EEEeeccccceeEEEEEecC-CceeceEeecCCCCccchhhHHHHHHHHHHHHHHhcCccccccC
Q psy15442        270 HKVYSILFYRFMPR-VDIVEKHNTAARRLYIRGHN-GKIYPYLVMNDSGLSDSRRDERVLQLLRMLNHYLAKQKETSKRF  347 (599)
Q Consensus       270 ~~~~~~~i~~f~~~-v~v~~~s~~~pkri~i~Gsd-G~~y~flvk~~kg~~dlR~DeRi~Ql~~l~N~iL~~~~etr~R~  347 (599)
                      +.++.++|.+|.|+ +.|+. |+++||+|+|+|+| |+.|.|++|.   +||+|||+|+||++++||.+|.+++    ++
T Consensus       402 P~~p~v~I~~~~~~~~~V~~-S~~~P~~l~~~gsD~G~~y~~i~K~---gDDLRQD~rv~Ql~~lmn~il~~~~----~~  473 (696)
T 2x6h_A          402 PLDPEIYITKIVPMRTSLFK-SALMPAKLTFVTSIAHHEYAAIFKH---GDDLRQDQLILQMITLMDKLLRREN----LD  473 (696)
T ss_dssp             SSCTTSEEEEECGGGCEECS-SSSCCEEEEEEETTTTCEEEEEEEC---SSCTHHHHHHHHHHHHHHHHHHHTT----CC
T ss_pred             CCCCCeEEEEEecCeEEEcc-cccCCeEEEEEecCCCCceeEEEec---CcccchhHHHHHHHHHHHHHHHhCC----CC
Confidence            34556999999985 66666 89999999999999 9999999966   5999999999999999999999874    79


Q ss_pred             ceeccceEEecCCCceeEEeCCCCccHHHHHHHhhhhhCCCCCCcHHHHHHHhhh---------hhhHhhHHHhHhHHHH
Q psy15442        348 LHFTVPRVVPVSAQLRLVEDNPASLSLLDIYKTSCSQIKIDYELPIVRYYDRLGT---------LQSRGNMTLQLALACF  418 (599)
Q Consensus       348 L~~~~y~ViPLs~~~gLIE~v~~~~tL~~i~~~~~~~~g~~~d~pi~~~~~kl~~---------~q~r~~Ft~slA~~S~  418 (599)
                      |.+++|.|||+++++||||||+ +.|+.+|++++.         ++..|+.+...         .++|++|++|+|++|+
T Consensus       474 L~i~~Y~Vipls~~~GLIE~V~-s~tl~~i~~~~~---------~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Sv  543 (696)
T 2x6h_A          474 LKLTPYKVLATSSKHGFLQYVD-SCTVAEVLAREG---------NIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCV  543 (696)
T ss_dssp             CCCCCCCEEESSTTCEEEECCC-CEEHHHHHHHSS---------SHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHH
T ss_pred             cEEeccEEEeccCCCCeeeeCC-CccHHHHHHhcC---------hHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999997 589999998752         35555544321         2578999999999999


Q ss_pred             HHHHhcCCCCCCCceeEEcCCCceeeeeeeeeccCccccccccchhhhcccchhHHHHhhhcccccccccCCCchhhhhh
Q psy15442        419 AEYVLHLTRLNPDMMYLHRDCGLLNVSYFKFDIDDSKGEFNNSRLEFENLSDSAKEIFRQKNLSEVYSNVDGAGVIIIII  498 (599)
Q Consensus       419 ~~YilglgDRhp~nIll~~~tG~v~~~~~hiDf~~~~g~~~~~~~~Fe~~~~~~~~~~~~k~~~~~~~~~d~~g~~~~~~  498 (599)
                      +|||||||||||+||||+ .||++    ||||||+++|.                                         
T Consensus       544 v~YILGlGDRH~~NILid-~tG~v----~HIDFG~~f~~-----------------------------------------  577 (696)
T 2x6h_A          544 ITYLLGVGDRHLDNLLLT-TNGKL----FHIDFGYILGR-----------------------------------------  577 (696)
T ss_dssp             HHHHHTCCCCCTTTEEEC-TTSCE----EECCCCSCTTC-----------------------------------------
T ss_pred             HHHHccCCCCCCcceEEe-CCCCE----EEEeehhhhcc-----------------------------------------
Confidence            999999999999999999 59999    99999998542                                         


Q ss_pred             hccCCCCCCCcccccHHHHHHhccCCCCcc--cHHHHHHHHHHhcCCchhHHHHHHHHhccchhhhhhh
Q psy15442        499 LGELNSNRPVPFRLTPNIMEFLTDIGVDGP--LTASIIATARCLVQPNFQVHAILKAILRDEMIAIQKK  565 (599)
Q Consensus       499 ~~~l~~pE~VPFRLT~Ni~~~lg~~gveG~--F~~~~~~~~~~L~~~~~~l~~~L~~fl~Dpl~~W~~~  565 (599)
                         -+.||.||||||+||+++||+.|+||.  |+.+|+.++++||++++.|++++++|++|++.+|...
T Consensus       578 ---~p~pe~VPFRLT~~mv~~mG~~g~eg~~~Fr~~c~~~~~~LR~~~~~il~ll~lml~~~lp~~~~~  643 (696)
T 2x6h_A          578 ---DPKPMPPPMKLSKEMVEAMGGISSEHHHEFRKQCYTAYLHLRRHANVMLNLFSLMVDATVPDIALE  643 (696)
T ss_dssp             ---CSSSCCCSSCCCHHHHHHTTSSSSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTCCCTTTTSS
T ss_pred             ---CCCCcCCCeecCHHHHHHhCCCCcccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHcCCCCccccC
Confidence               146899999999999999999999985  9999999999999999999999999999999999743
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A Back     alignment and structure
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Back     alignment and structure
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* Back     alignment and structure
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A Back     alignment and structure
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A* Back     alignment and structure
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A Back     alignment and structure
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Back     alignment and structure
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* Back     alignment and structure
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 599
d1e7ua4369 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (P 1e-13

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query599
d1e7ua4369 Phoshoinositide 3-kinase (PI3K), catalytic domain 100.0
d1e7ua4369 Phoshoinositide 3-kinase (PI3K), catalytic domain 99.5