Psyllid ID: psy15494

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MDCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQRRGTHSTMVLHTNYCHSTHVHYPD
Secondary Structure (PSIPRED)
ccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHHHccccHHEHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHEEEHHHHcHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
mdcwmndahsrwilTVPVCLSILVNLAILMNVLRVLLTKLhsnstnpapiGIRKAARAALILVPLfglhhillpfrpepkspweMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQrrgthstmvlhtnychsthvhypd
Flexible Loop (DISEMBL)
mdcwmndahsrwILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQRRGTHstmvlhtnychsthvhypd
Low Complexity Region (SEG)
MDCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQRRGTHSTMVLHTNYCHSTHVHYPD
Disordered region (IsUnstruct)
**CWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQRRGTHSTMVLHTNYCHSTHV****
Disordered Region (DISOPRED)
MDCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTK**************KAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYR**************************
Disordered Region (DISEMBL)
MDCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQRRGTHSTMVLHTNYCHSTHVHYPD
Disordered Region (DISPRO)
MDCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQRRGT********************
Transmembrane Helix (TMHMM)
ooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQRRGTHSTMVLHTNYCHSTHVHYPD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	149	2.2.26 [Sep-21-2011]
Q68EK2	470	Calcitonin gene-related p	yes	N/A	0.845	0.268	0.389	3e-18
P47872	440	Secretin receptor OS=Homo	yes	N/A	0.832	0.281	0.346	7e-17
O42602	415	Corticotropin-releasing f	N/A	N/A	0.838	0.301	0.356	1e-16
O62772	415	Corticotropin-releasing f	N/A	N/A	0.838	0.301	0.348	2e-16
Q60748	431	Corticotropin-releasing f	yes	N/A	0.825	0.285	0.354	2e-16
Q76LL8	415	Corticotropin-releasing f	no	N/A	0.838	0.301	0.348	2e-16
P34998	444	Corticotropin-releasing f	no	N/A	0.838	0.281	0.348	2e-16
P35347	415	Corticotropin-releasing f	no	N/A	0.838	0.301	0.348	3e-16
P35353	415	Corticotropin-releasing f	yes	N/A	0.838	0.301	0.348	3e-16
P47866	411	Corticotropin-releasing f	no	N/A	0.825	0.299	0.346	4e-16

>sp|Q68EK2|CALRL_DANRE Calcitonin gene-related peptide type 1 receptor OS=Danio rerio GN=calcrla PE=2 SV=1

 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 81/131 (61%), Gaps = 5/131 (3%)

Query: 2   DCWMNDAHSR-WILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 60
           +CW++   S  +I+  P+C ++LVNL  L+N++RVL+TKL       + + + KA RA L
Sbjct: 289 NCWISSNTSLLYIIHGPICAAMLVNLFFLLNIVRVLITKLKVTHQAKSSLYM-KAVRATL 347

Query: 61  ILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKM 120
           ILVPL G+ ++LLP++P  +   E +YD    +L+  QGL V+ +FCF N +V    R+ 
Sbjct: 348 ILVPLLGIQYVLLPYKPSGRVSAE-IYDYIMHILMHYQGLLVATIFCFFNGEVQAVLRRH 406

Query: 121 F--YRLQRRGT 129
           +  YR+Q   T
Sbjct: 407 WNQYRIQFGST 417

Receptor for calcitonin-gene-related peptide (CGRP) (By similarity). Receptor specificity may be modulated by accessory proteins. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.
Danio rerio (taxid: 7955)

>sp|P47872|SCTR_HUMAN Secretin receptor OS=Homo sapiens GN=SCTR PE=2 SV=2

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 78/130 (60%), Gaps = 6/130 (4%)

Query: 1   MDCWMNDAHSR--WILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIG-IRKAAR 57
           + CW  +A++   WI+  PV LSIL+N  + +N+LR+L+ KL +  T    +   ++ AR
Sbjct: 283 VGCWDINANASIWWIIRGPVILSILINFILFINILRILMRKLRTQETRGNEVSHYKRLAR 342

Query: 58  AALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAF 117
           + L+L+PLFG+H+I+  F PE     ++ +++    L S QGL V++L+CF N +V    
Sbjct: 343 STLLLIPLFGIHYIVFAFSPEDAMEIQLFFEL---ALGSFQGLVVAVLYCFLNGEVQLEV 399

Query: 118 RKMFYRLQRR 127
           +K + +   R
Sbjct: 400 QKKWQQWHLR 409

This is a receptor for secretin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Homo sapiens (taxid: 9606)

>sp|O42602|CRFR1_XENLA Corticotropin-releasing factor receptor 1 OS=Xenopus laevis GN=crhr1 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 2   DCWMNDA---HSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARA 58
            CW       ++ +I   PV L +L+N   L N++R+L+TKL + ST    I  RKA +A
Sbjct: 257 KCWFGKKAGVYTDFIYQGPVILVLLINFIFLFNIVRILMTKLRA-STTSETIQYRKAVKA 315

Query: 59  ALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFR 118
            L+L+PL G+ ++L    P       +V+  F++ L S QG  VS+ +CF N +V  A R
Sbjct: 316 TLVLLPLLGITYMLFFVTPGEDEISRIVFIYFNSFLQSFQGFFVSVFYCFLNSEVRSAVR 375

Query: 119 KMFYRLQRR 127
           K ++R Q +
Sbjct: 376 KRWHRWQDK 384

Receptor for corticotropin releasing factor (CRH). Shows high-affinity binding for urotensin I. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Xenopus laevis (taxid: 8355)

>sp|O62772|CRFR1_SHEEP Corticotropin-releasing factor receptor 1 OS=Ovis aries GN=CRHR1 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 2   DCWMND---AHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARA 58
            CW       ++ +I   P+ L +L+N   L N++R+L+TKL + ST    I  RKA +A
Sbjct: 257 KCWFGKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRA-STTSETIQYRKAVKA 315

Query: 59  ALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFR 118
            L+L+PL G+ ++L    P       +V+  F++ L S QG  VS+ +CF N +V  A R
Sbjct: 316 TLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIR 375

Query: 119 KMFYRLQRR 127
           K ++R Q +
Sbjct: 376 KRWHRWQDK 384

Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Ovis aries (taxid: 9940)

>sp|Q60748|CRFR2_MOUSE Corticotropin-releasing factor receptor 2 OS=Mus musculus GN=Crhr2 PE=1 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 2   DCWMNDAHSR---WILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARA 58
            CW          +I   PV L +L+N   L N++R+L+TKL +++T+   I  RKA +A
Sbjct: 273 QCWFGKEAGDLVDYIYQGPVMLVLLINFVFLFNIVRILMTKLRASTTSET-IQYRKAVKA 331

Query: 59  ALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFR 118
            L+L+PL G+ ++L    P      ++V+  F++ L S QG  VS+ +CF N +V  A R
Sbjct: 332 TLVLLPLLGITYMLFFVNPGEDDLSQIVFIYFNSFLQSFQGFFVSVFYCFFNGEVRAALR 391

Query: 119 KMFYRLQ 125
           K ++R Q
Sbjct: 392 KRWHRWQ 398

This is a receptor for corticotropin releasing factor. Shows high-affinity CRF binding. Also binds to urocortin I, II and III. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Mus musculus (taxid: 10090)

>sp|Q76LL8|CRFR1_MACMU Corticotropin-releasing factor receptor 1 OS=Macaca mulatta GN=CRHR1 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 2   DCWMND---AHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARA 58
            CW       ++ +I   P+ L +L+N   L N++R+L+TKL + ST    I  RKA +A
Sbjct: 257 KCWFGKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRA-STTSETIQYRKAVKA 315

Query: 59  ALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFR 118
            L+L+PL G+ ++L    P       +V+  F++ L S QG  VS+ +CF N +V  A R
Sbjct: 316 TLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIR 375

Query: 119 KMFYRLQRR 127
           K ++R Q +
Sbjct: 376 KRWHRWQDK 384

Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Macaca mulatta (taxid: 9544)

>sp|P34998|CRFR1_HUMAN Corticotropin-releasing factor receptor 1 OS=Homo sapiens GN=CRHR1 PE=1 SV=1

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 2   DCWMND---AHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARA 58
            CW       ++ +I   P+ L +L+N   L N++R+L+TKL + ST    I  RKA +A
Sbjct: 286 KCWFGKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRA-STTSETIQYRKAVKA 344

Query: 59  ALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFR 118
            L+L+PL G+ ++L    P       +V+  F++ L S QG  VS+ +CF N +V  A R
Sbjct: 345 TLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIR 404

Query: 119 KMFYRLQRR 127
           K ++R Q +
Sbjct: 405 KRWHRWQDK 413

Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Homo sapiens (taxid: 9606)

>sp|P35347|CRFR1_MOUSE Corticotropin-releasing factor receptor 1 OS=Mus musculus GN=Crhr1 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 2   DCWMND---AHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARA 58
            CW       ++ +I   P+ L +L+N   L N++R+L+TKL + ST    I  RKA +A
Sbjct: 257 KCWFGKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRA-STTSETIQYRKAVKA 315

Query: 59  ALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFR 118
            L+L+PL G+ ++L    P       +V+  F++ L S QG  VS+ +CF N +V  A R
Sbjct: 316 TLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIR 375

Query: 119 KMFYRLQRR 127
           K + R Q +
Sbjct: 376 KRWRRWQDK 384

Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Mus musculus (taxid: 10090)

>sp|P35353|CRFR1_RAT Corticotropin-releasing factor receptor 1 OS=Rattus norvegicus GN=Crhr1 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 2   DCWMND---AHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARA 58
            CW       ++ +I   P+ L +L+N   L N++R+L+TKL + ST    I  RKA +A
Sbjct: 257 KCWFGKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRA-STTSETIQYRKAVKA 315

Query: 59  ALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFR 118
            L+L+PL G+ ++L    P       +V+  F++ L S QG  VS+ +CF N +V  A R
Sbjct: 316 TLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIR 375

Query: 119 KMFYRLQRR 127
           K + R Q +
Sbjct: 376 KRWRRWQDK 384

Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Rattus norvegicus (taxid: 10116)

>sp|P47866|CRFR2_RAT Corticotropin-releasing factor receptor 2 OS=Rattus norvegicus GN=Crhr2 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 2   DCWMNDAHSR---WILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARA 58
            CW          +I   P+ L +L+N   L N++R+L+TKL +++T+   I  RKA +A
Sbjct: 253 QCWFGKEPGDLVDYIYQGPIILVLLINFVFLFNIVRILMTKLRASTTSET-IQYRKAVKA 311

Query: 59  ALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFR 118
            L+L+PL G+ ++L    P      ++V+  F++ L S QG  VS+ +CF N +V  A R
Sbjct: 312 TLVLLPLLGITYMLFFVNPGEDDLSQIVFIYFNSFLQSFQGFFVSVFYCFFNGEVRSALR 371

Query: 119 KMFYRLQ 125
           K ++R Q
Sbjct: 372 KRWHRWQ 378

This is a receptor for corticotropin releasing factor. Shows high-affinity CRF binding. Also binds to urocortin I, II and III. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
328715791	221	PREDICTED: calcitonin receptor-like [Acy	0.852	0.574	0.700	6e-47
157113539	544	calcitonin receptor [Aedes aegypti]	0.832	0.227	0.588	2e-35
403182794	422	AAEL006490-PA, partial [Aedes aegypti]	0.832	0.293	0.588	3e-35
270008144	405	hypothetical protein TcasGA2_TC013321 [T	0.966	0.355	0.558	3e-34
189237604	416	PREDICTED: similar to CG4395 CG4395-PA [	0.966	0.346	0.558	4e-34
195397023	467	GJ16914 [Drosophila virilis] gi|19414689	0.818	0.261	0.540	1e-30
195133064	490	GI16272 [Drosophila mojavensis] gi|19390	0.812	0.246	0.545	3e-30
198467581	496	GA18155 [Drosophila pseudoobscura pseudo	0.818	0.245	0.524	2e-29
357612140	410	neuropeptide receptor B4 [Danaus plexipp	0.812	0.295	0.528	2e-29
195352740	486	GM11523 [Drosophila sechellia] gi|194126	0.818	0.251	0.524	7e-29

>gi|328715791|ref|XP_001945334.2| PREDICTED: calcitonin receptor-like [Acyrthosiphon pisum]

 Score =  191 bits (486), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 89/127 (70%), Positives = 108/127 (85%)

Query: 2   DCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 61
            CWM+++H +W+LTVPV  SIL +L  LMNV+RVLLTKLH NSTNPAPIG+RKA RAALI
Sbjct: 73  QCWMHESHCQWVLTVPVFASILTSLMFLMNVMRVLLTKLHRNSTNPAPIGVRKAVRAALI 132

Query: 62  LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMF 121
           LVPLFG+H+IL+P+RP+ K+  E VY +FS VLVS+QGLCVS+LFCFANVDVHGAF K  
Sbjct: 133 LVPLFGIHYILIPYRPKHKTTVETVYQIFSVVLVSTQGLCVSVLFCFANVDVHGAFHKYI 192

Query: 122 YRLQRRG 128
            R++RRG
Sbjct: 193 RRIKRRG 199

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157113539|ref|XP_001651988.1| calcitonin receptor [Aedes aegypti]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 91/124 (73%)

Query: 1   MDCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 60
             CWMN++H+ W+LT+PVC S++ +L  L+NV+RVLLTKL+S S NPAP+G++KA RA L
Sbjct: 394 FSCWMNESHAMWLLTIPVCFSLVASLVFLINVVRVLLTKLNSTSPNPAPLGLKKATRATL 453

Query: 61  ILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKM 120
           IL+PLFGL HILLPFRP+     E  Y V SAVL+S QG CVS LFCFAN DV  A +  
Sbjct: 454 ILIPLFGLQHILLPFRPDKGCELERYYQVVSAVLISLQGACVSCLFCFANHDVIFAIKCQ 513

Query: 121 FYRL 124
             R 
Sbjct: 514 LSRF 517

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|403182794|gb|EAT41922.2| AAEL006490-PA, partial [Aedes aegypti]

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 91/124 (73%)

Query: 1   MDCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 60
             CWMN++H+ W+LT+PVC S++ +L  L+NV+RVLLTKL+S S NPAP+G++KA RA L
Sbjct: 272 FSCWMNESHAMWLLTIPVCFSLVASLVFLINVVRVLLTKLNSTSPNPAPLGLKKATRATL 331

Query: 61  ILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKM 120
           IL+PLFGL HILLPFRP+     E  Y V SAVL+S QG CVS LFCFAN DV  A +  
Sbjct: 332 ILIPLFGLQHILLPFRPDKGCELERYYQVVSAVLISLQGACVSCLFCFANHDVIFAIKCQ 391

Query: 121 FYRL 124
             R 
Sbjct: 392 LSRF 395

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008144|gb|EFA04592.1| hypothetical protein TcasGA2_TC013321 [Tribolium castaneum]

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/145 (55%), Positives = 104/145 (71%), Gaps = 1/145 (0%)

Query: 3   CWMNDAH-SRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 61
           CWM D++ S WILT PVC+S+LV+L  L+NVLRV+LT +H NS NPAP+G+R+AARAALI
Sbjct: 235 CWMADSYYSSWILTAPVCISLLVSLIFLINVLRVILTIMHPNSANPAPMGLRRAARAALI 294

Query: 62  LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMF 121
           L+PLFGL HIL+PFRP+   P+E +Y   + V+V+ QGLCVS LFCFAN DVH A R   
Sbjct: 295 LIPLFGLQHILIPFRPDMYDPYEHLYQYVTVVVVTLQGLCVSCLFCFANQDVHQAIRGFM 354

Query: 122 YRLQRRGTHSTMVLHTNYCHSTHVH 146
           +R   R T  +   +T    S  V+
Sbjct: 355 HRKVYRTTRWSNYHYTGAADSAGVY 379

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189237604|ref|XP_001808596.1| PREDICTED: similar to CG4395 CG4395-PA [Tribolium castaneum]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/145 (55%), Positives = 104/145 (71%), Gaps = 1/145 (0%)

Query: 3   CWMNDAH-SRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 61
           CWM D++ S WILT PVC+S+LV+L  L+NVLRV+LT +H NS NPAP+G+R+AARAALI
Sbjct: 246 CWMADSYYSSWILTAPVCISLLVSLIFLINVLRVILTIMHPNSANPAPMGLRRAARAALI 305

Query: 62  LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMF 121
           L+PLFGL HIL+PFRP+   P+E +Y   + V+V+ QGLCVS LFCFAN DVH A R   
Sbjct: 306 LIPLFGLQHILIPFRPDMYDPYEHLYQYVTVVVVTLQGLCVSCLFCFANQDVHQAIRGFM 365

Query: 122 YRLQRRGTHSTMVLHTNYCHSTHVH 146
           +R   R T  +   +T    S  V+
Sbjct: 366 HRKVYRTTRWSNYHYTGAADSAGVY 390

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195397023|ref|XP_002057128.1| GJ16914 [Drosophila virilis] gi|194146895|gb|EDW62614.1| GJ16914 [Drosophila virilis]

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/122 (54%), Positives = 83/122 (68%)

Query: 3   CWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALIL 62
           CWMND+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +IL
Sbjct: 318 CWMNDSFYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATIIL 377

Query: 63  VPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY 122
           VPLFGL H LLP+RP+  +  +  Y + S VLVS QG  VS LFCFAN DV  A R +  
Sbjct: 378 VPLFGLQHFLLPYRPDAGTQLDRFYQLLSVVLVSLQGFVVSFLFCFANHDVTFAMRTLLN 437

Query: 123 RL 124
           +L
Sbjct: 438 KL 439

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195133064|ref|XP_002010959.1| GI16272 [Drosophila mojavensis] gi|193906934|gb|EDW05801.1| GI16272 [Drosophila mojavensis]

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/121 (54%), Positives = 82/121 (67%)

Query: 3   CWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALIL 62
           CW+ND+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +IL
Sbjct: 341 CWINDSLYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATIIL 400

Query: 63  VPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY 122
           VPLFGL H LLP+RPE  +  +  Y + S VLVS QG  VS LFCFAN DV  A R M  
Sbjct: 401 VPLFGLQHFLLPYRPEAGTQLDRFYQLLSVVLVSLQGFVVSFLFCFANHDVTFAIRTMLN 460

Query: 123 R 123
           +
Sbjct: 461 K 461

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198467581|ref|XP_001354436.2| GA18155 [Drosophila pseudoobscura pseudoobscura] gi|198149313|gb|EAL31489.2| GA18155 [Drosophila pseudoobscura pseudoobscura]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 83/122 (68%)

Query: 2   DCWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALI 61
           +CW+ND+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +I
Sbjct: 346 NCWINDSLFLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATII 405

Query: 62  LVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMF 121
           LVPLFGL H LLP+RP+  +  +  Y + S VLVS QG  VS LFCFAN DV  A R + 
Sbjct: 406 LVPLFGLQHFLLPYRPDAGTQLDRFYQLLSVVLVSLQGFVVSFLFCFANHDVTFAMRTLL 465

Query: 122 YR 123
            +
Sbjct: 466 NK 467

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357612140|gb|EHJ67831.1| neuropeptide receptor B4 [Danaus plexippus]

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/121 (52%), Positives = 84/121 (69%)

Query: 3   CWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALIL 62
           CWM  + + WI+TVPV +S++ +   L+NV+RVLLTKLH      + +  +KAARAALIL
Sbjct: 268 CWMEQSEAFWIITVPVVISLIASFVFLINVVRVLLTKLHPAPHRYSSVATKKAARAALIL 327

Query: 63  VPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY 122
           +PLFGLH +L+PFRP P  P E +Y V SA+L S QG+CV+ILFCF N DV  A +    
Sbjct: 328 IPLFGLHFVLIPFRPSPDMPGEKLYQVVSALLTSLQGVCVAILFCFTNHDVVAAAKTYIS 387

Query: 123 R 123
           R
Sbjct: 388 R 388

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195352740|ref|XP_002042869.1| GM11523 [Drosophila sechellia] gi|194126916|gb|EDW48959.1| GM11523 [Drosophila sechellia]

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 82/122 (67%)

Query: 3   CWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALIL 62
           CW+ D+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +IL
Sbjct: 337 CWITDSLYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATIIL 396

Query: 63  VPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY 122
           VPLFGL H LLP+RP+  +  +  Y + S VLVS QG  VS LFCFAN DV  A R +  
Sbjct: 397 VPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSLQGFVVSFLFCFANHDVTFAIRTLLN 456

Query: 123 RL 124
           +L
Sbjct: 457 KL 458

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
FB|FBgn0030437	486	hec "hector" [Drosophila melan	0.818	0.251	0.524	6.9e-30
FB|FBgn0052843	443	Dh31-R1 "Diuretic hormone 31 r	0.744	0.250	0.504	3e-26
UNIPROTKB|Q8WN93	462	CALCRL "Calcitonin gene-relate	0.932	0.300	0.412	6.8e-22
RGD|2255	464	Calcrl "calcitonin receptor-li	0.932	0.299	0.418	1.2e-21
UNIPROTKB|F1PI78	462	CALCRL "Uncharacterized protei	0.932	0.300	0.391	3.1e-21
UNIPROTKB|Q16602	461	CALCRL "Calcitonin gene-relate	0.812	0.262	0.437	4e-21
UNIPROTKB|A6QP74	462	CALCRL "Calcitonin gene-relate	0.932	0.300	0.398	6.8e-21
UNIPROTKB|G3X6P6	462	CALCRL "Calcitonin gene-relate	0.932	0.300	0.398	6.8e-21
UNIPROTKB|G3N3V9	463	CALCRL "Calcitonin gene-relate	0.932	0.300	0.398	6.8e-21
MGI|MGI:1926944	463	Calcrl "calcitonin receptor-li	0.939	0.302	0.401	6.8e-21

FB|FBgn0030437 hec "hector" [Drosophila melanogaster (taxid:7227)]

 Score = 331 (121.6 bits), Expect = 6.9e-30, P = 6.9e-30
 Identities = 64/122 (52%), Positives = 82/122 (67%)

Query:     3 CWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALIL 62
             CW+ D+   WI +VP+ LS+L +   L+NVLRV++ KLH  S  PAP+ IRKA RA +IL
Sbjct:   337 CWITDSLYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATIIL 396

Query:    63 VPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY 122
             VPLFGL H LLP+RP+  +  +  Y + S VLVS QG  VS LFCFAN DV  A R +  
Sbjct:   397 VPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSLQGFVVSFLFCFANHDVTFAIRTLLN 456

Query:   123 RL 124
             +L
Sbjct:   457 KL 458

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0004948 "calcitonin receptor activity" evidence=IEA;ISS

GO:0008188 "neuropeptide receptor activity" evidence=ISS

GO:0008049 "male courtship behavior" evidence=IMP

FB|FBgn0052843 Dh31-R1 "Diuretic hormone 31 receptor 1" [Drosophila melanogaster (taxid:7227)]

 Score = 297 (109.6 bits), Expect = 3.0e-26, P = 3.0e-26
 Identities = 58/115 (50%), Positives = 78/115 (67%)

Query:     3 CWMNDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIG----IRKAARA 58
             CWMN  + + IL VPVC+S+ +NL  L N++RV+L KL++ ++     G    + +A RA
Sbjct:   287 CWMNQTNYQNILMVPVCISMFLNLLFLCNIVRVVLLKLNAPASIQGSCGPSRTVLQAFRA 346

Query:    59 ALILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDV 113
              L+LVPL GL +IL PFRP PK PWE  Y++ SA   S QGLCV+ILFCF N +V
Sbjct:   347 TLLLVPLLGLQYILTPFRPAPKHPWENTYEIISAFTASFQGLCVAILFCFCNGEV 401

GO:0004948 "calcitonin receptor activity" evidence=ISS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0008188 "neuropeptide receptor activity" evidence=ISS

GO:0008036 "diuretic hormone receptor activity" evidence=IDA

UNIPROTKB|Q8WN93 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Sus scrofa (taxid:9823)]

 Score = 260 (96.6 bits), Expect = 6.8e-22, P = 6.8e-22
 Identities = 61/148 (41%), Positives = 90/148 (60%)

Query:     2 DCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 59
             +CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   282 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 339

Query:    60 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRK 119
             LILVPL G+  +L+P+RPE K   E VYD    +LV  QGL VS ++CF N +V    R+
Sbjct:   340 LILVPLLGIEFVLIPWRPEGKIA-EEVYDYIMHILVHYQGLLVSTIYCFFNGEVQAILRR 398

Query:   120 MF--YRLQ--RRGTHSTMVLHTNYCHST 143
              +  Y++Q     +HS  +   +Y  ST
Sbjct:   399 NWNQYKIQFGNSFSHSDALRSASYTVST 426

GO:0005886 "plasma membrane" evidence=IEA

GO:0071329 "cellular response to sucrose stimulus" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0006171 "cAMP biosynthetic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA

GO:0001605 "adrenomedullin receptor activity" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

RGD|2255 Calcrl "calcitonin receptor-like" [Rattus norvegicus (taxid:10116)]

 Score = 258 (95.9 bits), Expect = 1.2e-21, P = 1.2e-21
 Identities = 62/148 (41%), Positives = 90/148 (60%)

Query:     2 DCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 59
             +CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   281 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 338

Query:    60 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRK 119
             LILVPL G+  +L P+RPE K   E VYD    +L+  QGL VS +FCF N +V    R+
Sbjct:   339 LILVPLLGIEFVLFPWRPEGKVA-EEVYDYVMHILMHYQGLLVSTIFCFFNGEVQAILRR 397

Query:   120 MF--YRLQ-RRG-THSTMVLHTNYCHST 143
              +  Y++Q   G +HS  +   +Y  ST
Sbjct:   398 NWNQYKIQFGNGFSHSDALRSASYTVST 425

GO:0001525 "angiogenesis" evidence=IEA;ISO

GO:0001605 "adrenomedullin receptor activity" evidence=IEA;ISO

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA;ISO

GO:0004948 "calcitonin receptor activity" evidence=IMP

GO:0005764 "lysosome" evidence=IEA;ISO

GO:0005768 "endosome" evidence=IEA;ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006171 "cAMP biosynthetic process" evidence=IEA;ISO

GO:0006816 "calcium ion transport" evidence=IEA;ISO

GO:0006937 "regulation of muscle contraction" evidence=IMP

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=ISO

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA;ISO

GO:0007507 "heart development" evidence=IEA;ISO

GO:0008284 "positive regulation of cell proliferation" evidence=ISO

GO:0008565 "protein transporter activity" evidence=IEA;ISO

GO:0015031 "protein transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IEA;ISO

GO:0031623 "receptor internalization" evidence=IEA;ISO

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA;ISO

GO:0050728 "negative regulation of inflammatory response" evidence=IMP

GO:0071329 "cellular response to sucrose stimulus" evidence=IEA;ISO

UNIPROTKB|F1PI78 CALCRL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 254 (94.5 bits), Expect = 3.1e-21, P = 3.1e-21
 Identities = 58/148 (39%), Positives = 90/148 (60%)

Query:     2 DCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 59
             +CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   282 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 339

Query:    60 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRK 119
             LILVPL G+  +L+P+RPE +   E +YD    +L+  QGL VS +FCF N +V    ++
Sbjct:   340 LILVPLLGIEFVLIPWRPEGRMA-EEIYDYIMHILMHYQGLLVSTIFCFFNGEVQAILKR 398

Query:   120 MF--YRLQ--RRGTHSTMVLHTNYCHST 143
              +  Y++Q     +HS  +   +Y  ST
Sbjct:   399 NWNQYKIQFGNSFSHSDALRSASYTVST 426

GO:0005886 "plasma membrane" evidence=IEA

GO:0071329 "cellular response to sucrose stimulus" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0006171 "cAMP biosynthetic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA

GO:0001605 "adrenomedullin receptor activity" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

UNIPROTKB|Q16602 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Homo sapiens (taxid:9606)]

 Score = 253 (94.1 bits), Expect = 4.0e-21, P = 4.0e-21
 Identities = 56/128 (43%), Positives = 82/128 (64%)

Query:     2 DCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 59
             +CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   281 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 338

Query:    60 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRK 119
             LILVPL G+  +L+P+RPE K   E VYD    +L+  QGL VS +FCF N +V    R+
Sbjct:   339 LILVPLLGIEFVLIPWRPEGKIA-EEVYDYIMHILMHFQGLLVSTIFCFFNGEVQAILRR 397

Query:   120 MF--YRLQ 125
              +  Y++Q
Sbjct:   398 NWNQYKIQ 405

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0050728 "negative regulation of inflammatory response" evidence=IEA

GO:0031623 "receptor internalization" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006171 "cAMP biosynthetic process" evidence=IDA

GO:0001525 "angiogenesis" evidence=IDA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA;TAS

GO:0015031 "protein transport" evidence=IDA

GO:0008565 "protein transporter activity" evidence=IDA

GO:0006816 "calcium ion transport" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0071329 "cellular response to sucrose stimulus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005764 "lysosome" evidence=IDA

GO:0001605 "adrenomedullin receptor activity" evidence=IDA

GO:0004930 "G-protein coupled receptor activity" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007187 "G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger" evidence=TAS

UNIPROTKB|A6QP74 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Bos taurus (taxid:9913)]

 Score = 251 (93.4 bits), Expect = 6.8e-21, P = 6.8e-21
 Identities = 59/148 (39%), Positives = 89/148 (60%)

Query:     2 DCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 59
             +CW++ D    +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   282 NCWISSDTQLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 339

Query:    60 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRK 119
             LILVPL G+  +L+P+RPE K   E +YD    +L+  QGL VS +FCF N +V    R+
Sbjct:   340 LILVPLLGIEFVLIPWRPEGKIA-EEIYDYIINILMHYQGLLVSTIFCFFNGEVQAILRR 398

Query:   120 MF--YRLQ--RRGTHSTMVLHTNYCHST 143
              +  Y++Q     +HS  +   +Y  ST
Sbjct:   399 NWNQYKIQFGNNFSHSDTLRSASYTVST 426

GO:0005886 "plasma membrane" evidence=IDA

GO:0031623 "receptor internalization" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043235 "receptor complex" evidence=IDA

GO:0005764 "lysosome" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

UNIPROTKB|G3X6P6 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Bos taurus (taxid:9913)]

 Score = 251 (93.4 bits), Expect = 6.8e-21, P = 6.8e-21
 Identities = 59/148 (39%), Positives = 89/148 (60%)

Query:     2 DCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 59
             +CW++ D    +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   282 NCWISSDTQLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 339

Query:    60 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRK 119
             LILVPL G+  +L+P+RPE K   E +YD    +L+  QGL VS +FCF N +V    R+
Sbjct:   340 LILVPLLGIEFVLIPWRPEGKIA-EEIYDYIINILMHYQGLLVSTIFCFFNGEVQAILRR 398

Query:   120 MF--YRLQ--RRGTHSTMVLHTNYCHST 143
              +  Y++Q     +HS  +   +Y  ST
Sbjct:   399 NWNQYKIQFGNNFSHSDTLRSASYTVST 426

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

UNIPROTKB|G3N3V9 CALCRL "Calcitonin gene-related peptide type 1 receptor" [Bos taurus (taxid:9913)]

 Score = 251 (93.4 bits), Expect = 6.8e-21, P = 6.8e-21
 Identities = 59/148 (39%), Positives = 89/148 (60%)

Query:     2 DCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGI-RKAARAA 59
             +CW++ D    +I+  P+C ++LVNL  L+N++RVL+TKL    T+ A   +  KA RA 
Sbjct:   283 NCWISSDTQLLYIIHGPICAALLVNLFFLLNIVRVLITKL--KVTHQAESNLYMKAVRAT 340

Query:    60 LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRK 119
             LILVPL G+  +L+P+RPE K   E +YD    +L+  QGL VS +FCF N +V    R+
Sbjct:   341 LILVPLLGIEFVLIPWRPEGKIA-EEIYDYIINILMHYQGLLVSTIFCFFNGEVQAILRR 399

Query:   120 MF--YRLQ--RRGTHSTMVLHTNYCHST 143
              +  Y++Q     +HS  +   +Y  ST
Sbjct:   400 NWNQYKIQFGNNFSHSDTLRSASYTVST 427

GO:0005886 "plasma membrane" evidence=IEA

GO:0071329 "cellular response to sucrose stimulus" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IEA

GO:0006171 "cAMP biosynthetic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005768 "endosome" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IEA

GO:0001605 "adrenomedullin receptor activity" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=IEA

MGI|MGI:1926944 Calcrl "calcitonin receptor-like" [Mus musculus (taxid:10090)]

 Score = 251 (93.4 bits), Expect = 6.8e-21, P = 6.8e-21
 Identities = 59/147 (40%), Positives = 89/147 (60%)

Query:     2 DCWMN-DAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAAL 60
             +CW++ D H  +I+  P+C ++LVNL  L+N++RVL+TKL       + + + KA RA L
Sbjct:   280 NCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTHQVESNLYM-KAVRATL 338

Query:    61 ILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKM 120
             ILVPL G+  +L P+RPE K   E VYD    +L+  QGL V+ +FCF N +V    R+ 
Sbjct:   339 ILVPLLGIEFVLFPWRPEGKVA-EEVYDYVMHILMHFQGLLVATIFCFFNGEVQAILRRN 397

Query:   121 F--YRLQ-RRG-THSTMVLHTNYCHST 143
             +  Y++Q   G +HS  +   +Y  ST
Sbjct:   398 WNQYKIQFGNGFSHSDALRSASYTVST 424

GO:0001525 "angiogenesis" evidence=ISO

GO:0001605 "adrenomedullin receptor activity" evidence=ISO

GO:0001635 "calcitonin gene-related polypeptide receptor activity" evidence=IGI

GO:0004871 "signal transducer activity" evidence=IEA

GO:0004888 "transmembrane signaling receptor activity" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0004948 "calcitonin receptor activity" evidence=ISO

GO:0005764 "lysosome" evidence=ISO

GO:0005768 "endosome" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0006171 "cAMP biosynthetic process" evidence=ISO

GO:0006816 "calcium ion transport" evidence=ISO

GO:0006937 "regulation of muscle contraction" evidence=ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0007166 "cell surface receptor signaling pathway" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IGI;TAS

GO:0007189 "adenylate cyclase-activating G-protein coupled receptor signaling pathway" evidence=IMP

GO:0007507 "heart development" evidence=IMP

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0008565 "protein transporter activity" evidence=ISO

GO:0015031 "protein transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030819 "positive regulation of cAMP biosynthetic process" evidence=ISO

GO:0031623 "receptor internalization" evidence=ISO

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IMP

GO:0050728 "negative regulation of inflammatory response" evidence=ISO

GO:0071329 "cellular response to sucrose stimulus" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	149
pfam00002	239	pfam00002, 7tm_2, 7 transmembrane receptor (Secret	7e-19

>gnl|CDD|215647 pfam00002, 7tm_2, 7 transmembrane receptor (Secretin family)

 Score = 79.2 bits (196), Expect = 7e-19
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 1   MDCWM-NDAHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAA 59
             CW+ N+    WI   PV L ILVN    +N+LR+L+ KL S          ++ A++ 
Sbjct: 139 PGCWLSNNGGFWWIFKGPVLLVILVNFIFFINILRILVQKLRSPDMGETDQYRKRLAKST 198

Query: 60  LILVPLFGLHHILLPFRPEPKSPWEMVYDVFSAVLVSSQGLCV 102
           L+L+PL G+  IL  F PE      +V+    A+L S QG  V
Sbjct: 199 LVLLPLLGITWILFLFAPEDD--VSIVFLYLFAILNSFQGFFV 239

This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs).They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognised. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97 ; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteristic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling. Length = 239

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	149
KOG4564|consensus	473		99.97
KOG4193|consensus	610		99.95
PF00002	242	7tm_2: 7 transmembrane receptor (Secretin family);	99.76
KOG4289|consensus	2531		99.67
PF05462	303	Dicty_CAR: Slime mold cyclic AMP receptor	97.99
PF10320	257	7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemorecep	95.74
PHA03087	335	G protein-coupled chemokine receptor-like protein;	94.13
PF02101	405	Ocular_alb: Ocular albinism type 1 protein; InterP	93.29
PF10328	274	7TM_GPCR_Srx: Serpentine type 7TM GPCR chemorecept	89.78
PHA02834	323	chemokine receptor-like protein; Provisional	82.85
PHA03234	338	DNA packaging protein UL33; Provisional	81.92
PF10324	318	7TM_GPCR_Srw: Serpentine type 7TM GPCR chemorecept	81.78

>KOG4564|consensus

Probab=99.97  E-value=4.4e-31  Score=226.85  Aligned_cols=122  Identities=39%  Similarity=0.777  Sum_probs=112.1

Q ss_pred             ccccccC--CceEEEehhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHhhhhhhhhhcccccCC
Q psy15494          2 DCWMNDA--HSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEP   79 (149)
Q Consensus         2 ~CWl~~~--~~iw~f~~Pv~~il~iN~~if~~v~~~l~~kl~~~~~~~~~~~~~~~~k~~~~L~pLLGltW~~g~~~~~~   79 (149)
                      .||..++  +..|++.||+++.+++|+++|++|+|+|++|+|++++.++ +++||++|++++|+||||++.++..+.+++
T Consensus       298 ~CW~~~~~~~~~WIi~gPi~~ai~vNf~flinIvrILv~KLr~~~~~~~-~~y~K~vKaTLvLIPLfGI~~ilf~~~P~~  376 (473)
T KOG4564|consen  298 GCWDSNDTGHIWWIIRGPILLAILVNFIFLINIVRILVTKLRASNASET-DQYRKLVKATLVLIPLFGIHYILFAFRPDE  376 (473)
T ss_pred             cccccCCCcceEEEEeccHHHHHHHHHHHHHHHHHHHHHHhcCccccch-HHHHHHHHHHHHHHHHcCCeeEEEEecCch
Confidence            5999875  4679999999999999999999999999999999876554 568999999999999999999999999876


Q ss_pred             CCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494         80 KSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ  125 (149)
Q Consensus        80 ~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~  125 (149)
                      + ....++.|.-.+|+|+|||||+++|||+|+|||+|+||.|+||+
T Consensus       377 ~-~~~~v~~~~~~~L~SfQGf~VAvlYCFlN~EVq~elrr~W~r~~  421 (473)
T KOG4564|consen  377 D-TLREVYLYFELFLGSFQGFFVAVLYCFLNGEVQAELRRKWSRWR  421 (473)
T ss_pred             H-HHHHHHHHHHHHHHhccchheehheeecCHHHHHHHHHHHHhcC
Confidence            4 45688999999999999999999999999999999999999998

>KOG4193|consensus

Probab=99.95  E-value=5e-28  Score=214.24  Aligned_cols=128  Identities=26%  Similarity=0.409  Sum_probs=107.2

Q ss_pred             ccccccC-CceEEEehhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHhhhhhhhhhcccccCCC
Q psy15494          2 DCWMNDA-HSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPK   80 (149)
Q Consensus         2 ~CWl~~~-~~iw~f~~Pv~~il~iN~~if~~v~~~l~~kl~~~~~~~~~~~~~~~~k~~~~L~pLLGltW~~g~~~~~~~   80 (149)
                      +||++.+ .++|+|.||+++++++|+++|+.+++++.++++..+...++.+-.+..|.++.|+++||+||+||++...++
T Consensus       461 ~CWl~~~~~~~~~F~GPv~~ii~~Ni~~Fv~t~~~l~~~~~~~~~~~~~~~~~~~~~~~l~L~~lLGlTW~fgi~s~~~~  540 (610)
T KOG4193|consen  461 VCWLDTQNGFIWSFLGPVTLIILVNIVMFVVTLKKLLRRLSKLQPIASKLENISLIRSALALLFLLGLTWIFGIFSWLPG  540 (610)
T ss_pred             ceEEecCCceEEEEehHHHHHHHHHHHHHHHHHHHHhhcccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            4999975 689999999999999999999999999988766544433333333679999999999999999999887653


Q ss_pred             CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhhcCCCCc
Q psy15494         81 SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQRRGTHS  131 (149)
Q Consensus        81 ~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~~~~~~~  131 (149)
                        ...+++|+|+|+|++||+|||++||++++++|++++|+.+..+++.+.+
T Consensus       541 --~~~v~~YlFti~NalQG~fIFi~~cll~~kvr~~~~k~~~~~~~~~~~~  589 (610)
T KOG4193|consen  541 --TSVVFAYLFTIFNALQGVFIFIFHCLLRKKVRKEYRKWLCCGRGDSSAS  589 (610)
T ss_pred             --cchHHHHHHHHHHHhhhhHhhHhhhhhhHHHHHHHHHHhcccCCCCCCC
Confidence              4789999999999999999999999999999999999887555444333

>PF00002 7tm_2: 7 transmembrane receptor (Secretin family); InterPro: IPR000832 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=99.76  E-value=7.8e-20  Score=143.92  Aligned_cols=99  Identities=31%  Similarity=0.553  Sum_probs=0.0

Q ss_pred             ccccccC-CceEEEehhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhH-HHHHHHHHHHhhhhhhhhhcccccCC
Q psy15494          2 DCWMNDA-HSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIR-KAARAALILVPLFGLHHILLPFRPEP   79 (149)
Q Consensus         2 ~CWl~~~-~~iw~f~~Pv~~il~iN~~if~~v~~~l~~kl~~~~~~~~~~~~~-~~~k~~~~L~pLLGltW~~g~~~~~~   79 (149)
                      .||++++ +..|+|.+|+++++++|+++++.+++++.++.+++++. ++++.+ +.+|+.+.|+|++|++|+++++...+
T Consensus       142 ~CWl~~~~~~~~~f~~P~~~~l~in~vi~~~v~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~L~~llg~~w~~~~~~~~~  220 (242)
T PF00002_consen  142 NCWLSNDWGFIWAFVGPVLIILLINIVIFILVLRVLVRKSRSSDKS-EKKKRRKKILRASLILLPLLGITWLFGILAVSD  220 (242)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccCCCceEEEEEecccceecccchhheeeEEeehhhhhhhhhh-hccchhhhHHHHHHHHHHHHHHHheeeeeeecc
Confidence            5999976 67899999999999999999999999988766643332 233444 48999999999999999999987654


Q ss_pred             CCCchHHHHHHHHHHhhcchhhh
Q psy15494         80 KSPWEMVYDVFSAVLVSSQGLCV  102 (149)
Q Consensus        80 ~~~~~~~~~ylF~ilnslQG~fI  102 (149)
                      + ..+.+++|+|+++||+||++|
T Consensus       221 ~-~~~~~~~~lf~i~nslQG~~I  242 (242)
T PF00002_consen  221 S-VDSLVFQYLFAILNSLQGFFI  242 (242)
T ss_dssp             -----------------------
T ss_pred             c-chHHHHHHHHHHHHcCcceeC
Confidence            2 246889999999999999986

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The secretin-like GPCRs include secretin [], calcitonin [], parathyroid hormone/parathyroid hormone-related peptides [] and vasoactive intestinal peptide [], all of which activate adenylyl cyclase and the phosphatidyl-inositol-calcium pathway. These receptors contain seven transmembrane regions, in a manner reminiscent of the rhodopsins and other receptors believed to interact with G-proteins (however there is no significant sequence identity between these families, the secretin-like receptors thus bear their own unique '7TM' signature). Their N terminus is probably located on the extracellular side of the membrane and potentially glycosylated. This N-terminal region contains a long conserved region which allow the binding of large peptidic ligand such as glucagon, secretin, VIP and PACAP; this region contains five conserved cysteines residues which could be involved in disulphide bond. The C-terminal region of these receptor is probably cytoplasmic. Every receptor gene in this family is encoded on multiple exons, and several of these genes are alternatively spliced to yield functionally distinct products. ; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane; PDB: 3L2J_A 1BL1_A.

>KOG4289|consensus

Probab=99.67  E-value=8.9e-17  Score=149.60  Aligned_cols=111  Identities=22%  Similarity=0.352  Sum_probs=95.2

Q ss_pred             cccccc-CCceEEEehhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCchhhHHHHHHHHHHHhhhhhhhhhcccccCCC
Q psy15494          2 DCWMND-AHSRWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPIGIRKAARAALILVPLFGLHHILLPFRPEPK   80 (149)
Q Consensus         2 ~CWl~~-~~~iw~f~~Pv~~il~iN~~if~~v~~~l~~kl~~~~~~~~~~~~~~~~k~~~~L~pLLGltW~~g~~~~~~~   80 (149)
                      +|||+. +..+|+|.|||++++++|+..++...|+.+.|+...   ..++..-+.++..+.++.++|.||++|+++... 
T Consensus      2288 fCwlS~h~~LiWsfagPigl~i~ms~~~~~lsa~vSc~~k~~~---f~kK~~v~~lq~~fl~llllsatwl~~ll~vn~- 2363 (2531)
T KOG4289|consen 2288 FCWLSPHDTLIWSFAGPIGLVILMSFYAAALSARVSCHKKYQV---FVKKGNVSVLQHSFLLLLLLSATWLLGLLAVNP- 2363 (2531)
T ss_pred             eeecccchheeeeecccceeeehHHHHHHHHHHHHhhhhhhee---eeeccchhhhHHHHHHHHHHHHHHHHHHHhcCC-
Confidence            699995 678999999999999999999999988877665432   222233457899999999999999999998753 


Q ss_pred             CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHH
Q psy15494         81 SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFR  118 (149)
Q Consensus        81 ~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~  118 (149)
                        ....|+|+|++++.+||.|++++||++|.|||++++
T Consensus      2364 --~~l~fhyl~a~~~~lqg~~Vlll~cVl~~~~raa~~ 2399 (2531)
T KOG4289|consen 2364 --DPLEFHYLFASIIGLQGPFVLLLWCVLNIEVRAALK 2399 (2531)
T ss_pred             --chHHHHHHHHHHHHhhhHHHHHHHhhhcHHHHHhhc
Confidence              368899999999999999999999999999999988

>PF05462 Dicty_CAR: Slime mold cyclic AMP receptor

Probab=97.99  E-value=5e-05  Score=62.97  Aligned_cols=116  Identities=12%  Similarity=0.192  Sum_probs=67.9

Q ss_pred             ccccccCCc---eEEEehhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCCch-hhHHHHHHHHHHHhhhhhhhhhcccc-
Q psy15494          2 DCWMNDAHS---RWILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPAPI-GIRKAARAALILVPLFGLHHILLPFR-   76 (149)
Q Consensus         2 ~CWl~~~~~---iw~f~~Pv~~il~iN~~if~~v~~~l~~kl~~~~~~~~~~-~~~~~~k~~~~L~pLLGltW~~g~~~-   76 (149)
                      -||++++..   +..|-+|+.+++.++.++.....+...+..+.... ++++ ..+...|... -.-++=+.|+++... 
T Consensus       145 WCWI~~~~~~~r~~lfY~Pl~ii~~~~~ilv~i~~~~~y~~~~~~~s-d~~~~~~~~~~kL~~-Yp~ifiicw~fa~INR  222 (303)
T PF05462_consen  145 WCWIKPEWDVWRFALFYIPLWIIIIISAILVGITMRYIYRVIRNGVS-DNKDKHLKYQLKLVN-YPLIFIICWIFATINR  222 (303)
T ss_pred             ceeecCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc-hhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence            399997532   34678999888888776655555544333332221 1122 2222334222 122334588887521 


Q ss_pred             ---cCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHH
Q psy15494         77 ---PEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMF  121 (149)
Q Consensus        77 ---~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~  121 (149)
                         ..++  ......++-+.+..+||++-++.|.+.|+-.++.+....
T Consensus       223 I~~~~~~--~~~~l~~Lh~~~s~lqGf~nsivy~~n~~~~~~~~~~~~  268 (303)
T PF05462_consen  223 IYNFIGK--NPFWLSVLHVGFSPLQGFFNSIVYGYNNSLMWRYLGSKI  268 (303)
T ss_pred             HHHHhcC--CchHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence               1111  234566777889999999999999988876665555443

>PF10320 7TM_GPCR_Srsx: Serpentine type 7TM GPCR chemoreceptor Srsx; InterPro: IPR019424 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=95.74  E-value=0.028  Score=45.08  Aligned_cols=69  Identities=16%  Similarity=0.162  Sum_probs=48.6

Q ss_pred             hhhHHHHHHHHHHHhhhhhhhhhccc------ccCCCCCc-hHHHH--HHHHHHhhcchhhhhhhhhhcChHHHHHHHHH
Q psy15494         50 IGIRKAARAALILVPLFGLHHILLPF------RPEPKSPW-EMVYD--VFSAVLVSSQGLCVSILFCFANVDVHGAFRKM  120 (149)
Q Consensus        50 ~~~~~~~k~~~~L~pLLGltW~~g~~------~~~~~~~~-~~~~~--ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~  120 (149)
                      ++.+|..|....++.+.-.+|.+...      ....+++. ..+..  -+++.+|.-|=+|++.   .+|+|=|+++++.
T Consensus       180 ~~~~kv~ksL~v~v~i~i~~w~~s~~~~~v~~~~~~~~~~~~~i~~~~~i~v~~~~s~~ffV~~---~~S~EYR~af~~~  256 (257)
T PF10320_consen  180 SRSKKVFKSLKVTVIIFIFSWFLSQIINTVSLALGLDGETIAIIQMYAGIFVNISYSQNFFVYY---WRSSEYRKAFREL  256 (257)
T ss_pred             hhHHHHHHHhhhheeeeeHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHheEEE---EcCHHHHHHHHHh
Confidence            34578899999999999999998631      12211111 12333  3888899999888655   4999999999987


Q ss_pred             H
Q psy15494        121 F  121 (149)
Q Consensus       121 ~  121 (149)
                      |
T Consensus       257 ~  257 (257)
T PF10320_consen  257 F  257 (257)
T ss_pred             C
Confidence            5

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class sx (Srsx), which is a solo family amongst the superfamilies of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' [].

>PHA03087 G protein-coupled chemokine receptor-like protein; Provisional

Probab=94.13  E-value=0.91  Score=37.02  Aligned_cols=82  Identities=13%  Similarity=0.103  Sum_probs=49.7

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc----cc------cCCCCCchHHHHHH---HHHHhhcchhhhhhhhhhcChHHHHHHH
Q psy15494         52 IRKAARAALILVPLFGLHHILLP----FR------PEPKSPWEMVYDVF---SAVLVSSQGLCVSILFCFANVDVHGAFR  118 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~----~~------~~~~~~~~~~~~yl---F~ilnslQG~fIfl~yC~~n~eVr~~~~  118 (149)
                      .+|..|..+.++.++-+.|.-..    ..      ..+.........++   ...+-.+-+..=-++|++.+++.|+++|
T Consensus       239 ~~k~~k~l~~iv~~f~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ns~~NPiIY~~~~~~fr~~~~  318 (335)
T PHA03087        239 NKKAIKLVLIIVILFVIFWLPFNVSVFVYSLHILHFKSGCKAVKYIQYALHVTEIISLSHCCINPLIYAFVSEFFNKHKK  318 (335)
T ss_pred             cchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHHHHHHhhhhhHHHHcCHHHHHHHH
Confidence            35678888888888888886321    10      01111111122222   2223333455677899999999999999


Q ss_pred             HHHHHhhcCCCCccc
Q psy15494        119 KMFYRLQRRGTHSTM  133 (149)
Q Consensus       119 r~~~r~~~~~~~~~~  133 (149)
                      +.++....++.+++.
T Consensus       319 ~~~~~~~~~~~~~~~  333 (335)
T PHA03087        319 KSLKLMFTSSGKSIS  333 (335)
T ss_pred             HHHHHHhhcCCcccc
Confidence            998777766655543

>PF02101 Ocular_alb: Ocular albinism type 1 protein; InterPro: IPR001414 Ocular albinism type 1 (OA1) is an X-linked disorder characterised by severe impairment of visual acuity, retinal hypopigmentation and the presence of macromelanosomes

Probab=93.29  E-value=0.31  Score=41.91  Aligned_cols=94  Identities=14%  Similarity=0.198  Sum_probs=57.4

Q ss_pred             EEehhhHHHHHHHHHHHHHHHHHHHhhccCCCCCCC-ch-hhHHHHHHH-HHHHhhhhhhhhhcc------c--ccCCC-
Q psy15494         13 ILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNPA-PI-GIRKAARAA-LILVPLFGLHHILLP------F--RPEPK-   80 (149)
Q Consensus        13 ~f~~Pv~~il~iN~~if~~v~~~l~~kl~~~~~~~~-~~-~~~~~~k~~-~~L~pLLGltW~~g~------~--~~~~~-   80 (149)
                      ..-+|++++++.|=++|....+.+-+.++..+...+ ++ +.-+.+|-= +....++=+.|+-..      +  ....+ 
T Consensus       197 ttY~PlllVlvaNPiLy~~a~~~V~~~lk~r~g~yT~~ER~l~~~IK~kFf~I~lVF~iCWlpNIINg~LL~~l~~~~~i  276 (405)
T PF02101_consen  197 TTYIPLLLVLVANPILYIKAVRAVASLLKGRQGIYTENERRLGAQIKIKFFKIMLVFYICWLPNIINGSLLFYLEMQPDI  276 (405)
T ss_pred             HHHHHHHHHHHhccHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHhHHHHHHhhccccc
Confidence            346999999999999999999887665554432221 11 111223221 222335557777431      1  11111 


Q ss_pred             -C-------CchHHHHHHHHHHhhcchhhhhhhh
Q psy15494         81 -S-------PWEMVYDVFSAVLVSSQGLCVSILF  106 (149)
Q Consensus        81 -~-------~~~~~~~ylF~ilnslQG~fIfl~y  106 (149)
                       +       +.....-|+..|+|-+|||+-.+.|
T Consensus       277 ~~~sl~~~~~a~~t~W~IMaIlNPlQgfLnsLay  310 (405)
T PF02101_consen  277 NGGSLKQVRNAALTTWFIMAILNPLQGFLNSLAY  310 (405)
T ss_pred             ccccccchhhHHHHHHHHHHHHhHHHHHHHHHhh
Confidence             0       1234567899999999999999987

A novel transcript from the OA1 critical region is expressed in high levels in RNA samples from retina and from melanoma and encodes a potential integral membrane protein []. This protein is of unknown function but is known to bind heterotrimeric G proteins.; GO: 0016020 membrane

>PF10328 7TM_GPCR_Srx: Serpentine type 7TM GPCR chemoreceptor Srx; InterPro: IPR019430 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=89.78  E-value=1  Score=35.99  Aligned_cols=27  Identities=19%  Similarity=0.230  Sum_probs=19.8

Q ss_pred             HHHHHhhcchhhhhhhhhhcChHHHHHHHHH
Q psy15494         90 FSAVLVSSQGLCVSILFCFANVDVHGAFRKM  120 (149)
Q Consensus        90 lF~ilnslQG~fIfl~yC~~n~eVr~~~~r~  120 (149)
                      .....+++.|+...    ..|+|+|+.++|.
T Consensus       246 ~w~~~h~~DG~i~l----~fN~~~r~~~~~~  272 (274)
T PF10328_consen  246 SWVLVHALDGLIML----IFNSEIRRKIRKK  272 (274)
T ss_pred             HHHHHHHhcceeEe----EEcHHHHHHHHhc
Confidence            34667888888754    4689999887764

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class x (Srx) from the Srg superfamily [, ]. Srg receptors contain seven hydrophobic, putative transmembrane, regions and can be distinguished from other 7TM GPCR receptors by their own characteristic TM signatures.

>PHA02834 chemokine receptor-like protein; Provisional

Probab=82.85  E-value=1.7  Score=35.68  Aligned_cols=29  Identities=21%  Similarity=0.439  Sum_probs=23.0

Q ss_pred             hhhhhhhhhhcChHHHHHHHHHHHHhhcC
Q psy15494         99 GLCVSILFCFANVDVHGAFRKMFYRLQRR  127 (149)
Q Consensus        99 G~fIfl~yC~~n~eVr~~~~r~~~r~~~~  127 (149)
                      ..+==++|++.|++.|+++++.++++.+.
T Consensus       285 s~iNPiIY~~~~~~fR~~~~~~~~~~~~~  313 (323)
T PHA02834        285 CCVNPIIYAFVGKNFKKVFKNMFCRTNNI  313 (323)
T ss_pred             ccccHHHHHHhcHHHHHHHHHHHHhhhhh
Confidence            33445789999999999999988777653

>PHA03234 DNA packaging protein UL33; Provisional

Probab=81.92  E-value=9.2  Score=31.84  Aligned_cols=67  Identities=13%  Similarity=0.019  Sum_probs=40.2

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc----c---c---cCCCCCch----------HHHHHHHHHHhhcchhhhhhhhhhcCh
Q psy15494         52 IRKAARAALILVPLFGLHHILLP----F---R---PEPKSPWE----------MVYDVFSAVLVSSQGLCVSILFCFANV  111 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~----~---~---~~~~~~~~----------~~~~ylF~ilnslQG~fIfl~yC~~n~  111 (149)
                      .+|.+|..+.++..+.+.|.=-.    .   .   ..++....          ..++|+-+.+|.       ++|++.++
T Consensus       232 ~~k~~k~i~~vv~vF~iCWlPy~iv~l~~~~~~~~~~~~c~~~~~~~~~~~v~~~La~~nsclNP-------iIY~f~~~  304 (338)
T PHA03234        232 HKKTLFFIRILILSFLCIQIPNIAILICEIAFLYIANNSCFGLAQREILQIIIRLMPEIHCFSNP-------LVYAFTGG  304 (338)
T ss_pred             hhhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHhhhhhhH-------HHHHHhhH
Confidence            35778888888888888887321    1   0   00111111          112223333333       68999999


Q ss_pred             HHHHHHHHHHHHhh
Q psy15494        112 DVHGAFRKMFYRLQ  125 (149)
Q Consensus       112 eVr~~~~r~~~r~~  125 (149)
                      +.|+++++.++++.
T Consensus       305 ~FR~~~~~~~~~~~  318 (338)
T PHA03234        305 DFRLRFTACFQDFF  318 (338)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999998877653

>PF10324 7TM_GPCR_Srw: Serpentine type 7TM GPCR chemoreceptor Srw; InterPro: IPR019427 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=81.78  E-value=12  Score=30.24  Aligned_cols=33  Identities=15%  Similarity=0.338  Sum_probs=23.6

Q ss_pred             HHHHHhhcchhhhhhhhhhcChHHHHHHHHHHH
Q psy15494         90 FSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY  122 (149)
Q Consensus        90 lF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~  122 (149)
                      ++..+..+=...=|+++|+++.|=|++.|+.++
T Consensus       284 ~~~~l~~~ns~~h~~ic~~mSsqYR~t~~~~f~  316 (318)
T PF10324_consen  284 IFNILITINSSIHFFICCFMSSQYRKTVKKLFG  316 (318)
T ss_pred             HHHHHHHHHhhhHHHhhhhhhHHHHHHHHHHhc
Confidence            333333444556678899999999999998764

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). The nematode Caenorhabditis elegans has only 14 types of chemosensory neuron, yet is able to sense and respond to several hundred different chemicals because each neuron detects several stimuli []. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf' []. Chemoreception in C. elegans is mediated by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs). More than 1300 potential chemoreceptor genes have been identified in C. elegans, which are generally prefixed sr for serpentine receptor. The receptor superfamilies include Sra (Sra, Srb, Srab, Sre), Str (Srh, Str, Sri, Srd, Srj, Srm, Srn) and Srg (Srx, Srt, Srg, Sru, Srv, Srxa), as well as the families Srw, Srz, Srbc, Srsx and Srr [, , ]. Many of these proteins have homologues in Caenorhabditis briggsae. This entry represents serpentine receptor class w (Srw), which is a solo family amongst the superfamilies of chemoreceptors. The genes encoding Srw do not appear to be under as strong an adaptive evolutionary pressure as those of Srz [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	149
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	97.23
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	97.11
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	97.01
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	96.87
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	96.79
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	96.67
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	96.64
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	96.59
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	96.53
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	96.35
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	96.23
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	96.18
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	95.46
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	93.58
2lnl_A	296	C-X-C chemokine receptor type 1; G protein coupled	93.5
3vw7_A	484	Proteinase-activated receptor 1, lysozyme; high re	92.77
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	92.1
4grv_A	510	Neurotensin receptor type 1, lysozyme chimera; G-p	91.17

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*

Probab=97.23  E-value=0.0013  Score=50.39  Aligned_cols=112  Identities=16%  Similarity=0.185  Sum_probs=57.3

Q ss_pred             EEEehhhHHHHHHHHHHHHHHHHHHHhhccCCCCCC-Cc---hhhHHHHHHHHHHHhhhhhhhhhcc----cccCCCCCc
Q psy15494         12 WILTVPVCLSILVNLAILMNVLRVLLTKLHSNSTNP-AP---IGIRKAARAALILVPLFGLHHILLP----FRPEPKSPW   83 (149)
Q Consensus        12 w~f~~Pv~~il~iN~~if~~v~~~l~~kl~~~~~~~-~~---~~~~~~~k~~~~L~pLLGltW~~g~----~~~~~~~~~   83 (149)
                      ..+..|..+++..+..++..+-+. .++.+..+... ++   ++.+|..|..+.++.++-+.|+-..    ....+....
T Consensus       184 ~~~~ip~~ii~~~y~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~~~  262 (315)
T 4amj_A          184 ISFYIPLLIMIFVALRVYREAKEQ-IRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLV  262 (315)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHTC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence            346788888887776544332111 11111111111 11   1235677777777777888887422    111111111


Q ss_pred             hHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494         84 EMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ  125 (149)
Q Consensus        84 ~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~  125 (149)
                      ......+...+..+....=.++|+ .|+|.|+++++.+++.+
T Consensus       263 ~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~  303 (315)
T 4amj_A          263 PDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPR  303 (315)
T ss_dssp             CHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC---
T ss_pred             hHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCC
Confidence            122233344455555666777889 89999999999875443

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A

Probab=97.11  E-value=0.00078  Score=54.51  Aligned_cols=75  Identities=21%  Similarity=0.286  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHhhhhhhhhhccc----c-cCCC-CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhhc
Q psy15494         53 RKAARAALILVPLFGLHHILLPF----R-PEPK-SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQR  126 (149)
Q Consensus        53 ~~~~k~~~~L~pLLGltW~~g~~----~-~~~~-~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~~  126 (149)
                      +|.+|..+.++.++-+.|+-...    . ..++ ......+.++...+..+...+=.++|++.|++.|+++++.+++.++
T Consensus       350 ~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~  429 (447)
T 4eiy_A          350 VHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVL  429 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHHh
Confidence            46677778888888888874321    1 1111 1122334455556666667778889999999999999999987664


Q ss_pred             C
Q psy15494        127 R  127 (149)
Q Consensus       127 ~  127 (149)
                      +
T Consensus       430 r  430 (447)
T 4eiy_A          430 R  430 (447)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*

Probab=96.87  E-value=0.0012  Score=53.93  Aligned_cols=77  Identities=22%  Similarity=0.289  Sum_probs=53.1

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc----cc-cCCC-CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494         52 IRKAARAALILVPLFGLHHILLP----FR-PEPK-SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ  125 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~----~~-~~~~-~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~  125 (149)
                      -+|.+|..+.++.++-+.|+-..    +. ...+ ........++...+-.+...+=.++|+++|++.|+++++.++++.
T Consensus       390 ~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~  469 (488)
T 3eml_A          390 EVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV  469 (488)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcc
Confidence            35677888888888888887321    11 1111 122344455666677777788899999999999999999998777


Q ss_pred             cCC
Q psy15494        126 RRG  128 (149)
Q Consensus       126 ~~~  128 (149)
                      ++.
T Consensus       470 ~~~  472 (488)
T 3eml_A          470 LRQ  472 (488)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            543

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*

Probab=96.79  E-value=0.0029  Score=53.03  Aligned_cols=73  Identities=12%  Similarity=0.114  Sum_probs=41.5

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc----cccCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494         52 IRKAARAALILVPLFGLHHILLP----FRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ  125 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~----~~~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~  125 (149)
                      .+|..|..+.++.++-+.|+-..    +...........+..+...+..+...+=.++|+ +|++.|+++++.+++.+
T Consensus       417 ~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~  493 (514)
T 3sn6_R          417 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRR  493 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCc
Confidence            35677777777777778887421    111111111222233344444555556667888 89999999998775444

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...

Probab=96.67  E-value=0.0011  Score=51.64  Aligned_cols=71  Identities=10%  Similarity=0.246  Sum_probs=44.9

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc----cc-cCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHH
Q psy15494         52 IRKAARAALILVPLFGLHHILLP----FR-PEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY  122 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~----~~-~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~  122 (149)
                      .++..|..+.++..+-+.|+-..    +. ...+.........+...+..+....=-++|++.|+|.|+++++.++
T Consensus       248 ~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~  323 (349)
T 1u19_A          248 EKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLC  323 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCcccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhc
Confidence            34566766666667777777421    11 1111111233344555666667777888999999999999999875

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*

Probab=96.64  E-value=0.0022  Score=52.15  Aligned_cols=73  Identities=10%  Similarity=0.043  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHhhhhhhhhhcc----cccCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494         53 RKAARAALILVPLFGLHHILLP----FRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ  125 (149)
Q Consensus        53 ~~~~k~~~~L~pLLGltW~~g~----~~~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~  125 (149)
                      +|.+|..+.++.++-+.|+-..    +..............+...+..+....=.++|+++|++.|+++++.++..+
T Consensus       384 ~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~  460 (467)
T 3uon_A          384 KKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHY  460 (467)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhc
Confidence            5778888888888888887421    111111111233445556667777788899999999999999999874333

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*

Probab=96.59  E-value=0.014  Score=47.20  Aligned_cols=73  Identities=18%  Similarity=0.333  Sum_probs=45.2

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc----cc-cC--CCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHh
Q psy15494         52 IRKAARAALILVPLFGLHHILLP----FR-PE--PKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRL  124 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~----~~-~~--~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~  124 (149)
                      .+|.+|..+.++.++-+.|+-..    +. ..  ...........+...+.-+....=.++|+++|+|.|++++|.+++.
T Consensus       378 ~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~~  457 (464)
T 4dkl_A          378 LRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPT  457 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhccc
Confidence            36788888888888889998432    11 11  1111112222233334555566778899999999999999875443

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A

Probab=96.53  E-value=0.0022  Score=50.62  Aligned_cols=74  Identities=16%  Similarity=0.242  Sum_probs=44.4

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc-------cccCCC-CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHH
Q psy15494         52 IRKAARAALILVPLFGLHHILLP-------FRPEPK-SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYR  123 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~-------~~~~~~-~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r  123 (149)
                      .+|..|..+.++.++-+.|+-..       +..... .........+...+..+....=-++|++.|+|.|+++++.+++
T Consensus       243 ~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~  322 (364)
T 2ks9_A          243 KRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRC  322 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSS
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence            45677877777778888886321       111110 0011112223333444455667789999999999999998865


Q ss_pred             hh
Q psy15494        124 LQ  125 (149)
Q Consensus       124 ~~  125 (149)
                      ++
T Consensus       323 ~~  324 (364)
T 2ks9_A          323 CP  324 (364)
T ss_dssp             SC
T ss_pred             cC
Confidence            44

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}

Probab=96.35  E-value=0.0092  Score=48.67  Aligned_cols=74  Identities=12%  Similarity=0.081  Sum_probs=46.2

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc----cccC-CCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494         52 IRKAARAALILVPLFGLHHILLP----FRPE-PKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ  125 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~----~~~~-~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~  125 (149)
                      .+|.+|..+.++.++-+.|+-..    +... +..........+...+..+....=.++||++|+|.|+++++.++..+
T Consensus       396 ~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~  474 (481)
T 3pbl_A          396 EKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCGR  474 (481)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC--
T ss_pred             hhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhccC
Confidence            46777888888888888887432    1111 11112222333444455556667788999999999999999885333

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}

Probab=96.23  E-value=0.0088  Score=48.29  Aligned_cols=74  Identities=15%  Similarity=0.123  Sum_probs=46.3

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc----c-ccCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhhc
Q psy15494         52 IRKAARAALILVPLFGLHHILLP----F-RPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQR  126 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~----~-~~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~~  126 (149)
                      .+|.+|..+.++.++-+.|+-..    + ...... ......++...+..+....=.++|+++|+|.|+++++.+++.++
T Consensus       368 ~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~-~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~  446 (452)
T 3rze_A          368 ERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC-CNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRSG  446 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-SCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC---
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc-ccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhccc
Confidence            35778888888888888887321    1 111111 11222334455555666777889999999999999998865443

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*

Probab=96.18  E-value=0.016  Score=47.18  Aligned_cols=109  Identities=9%  Similarity=0.105  Sum_probs=57.7

Q ss_pred             EehhhHHHHHHHHHHHHHHHHHHHh--hccCCCCCCCch-------hhHHHHHHHHHHHhhhhhhhhhcc----cccCCC
Q psy15494         14 LTVPVCLSILVNLAILMNVLRVLLT--KLHSNSTNPAPI-------GIRKAARAALILVPLFGLHHILLP----FRPEPK   80 (149)
Q Consensus        14 f~~Pv~~il~iN~~if~~v~~~l~~--kl~~~~~~~~~~-------~~~~~~k~~~~L~pLLGltW~~g~----~~~~~~   80 (149)
                      +.+|.+++++.+..++..+-+.-.+  +........+.+       +.+|.+|..++++.++-+.|+-..    +.....
T Consensus       209 ~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~  288 (448)
T 2z73_A          209 FFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGP  288 (448)
T ss_dssp             THHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence            5677777777776665544332111  111111111111       134667777777667777776321    111110


Q ss_pred             -CCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHH
Q psy15494         81 -SPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY  122 (149)
Q Consensus        81 -~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~  122 (149)
                       .........+...+..+...+=.++|+++|+|.|+++++.++
T Consensus       289 ~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~  331 (448)
T 2z73_A          289 LEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP  331 (448)
T ss_dssp             GGGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred             cccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence             001122223334444455567788999999999999999875

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*

Probab=95.46  E-value=0.057  Score=44.95  Aligned_cols=73  Identities=12%  Similarity=0.102  Sum_probs=43.6

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc----cccCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhh
Q psy15494         52 IRKAARAALILVPLFGLHHILLP----FRPEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQ  125 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~----~~~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~  125 (149)
                      -+|++|..++++.++-+.|+=.+    +..............++..+.-+....=-++|++ |+|.|+++++.+++.+
T Consensus       403 e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~~~  479 (500)
T 2rh1_A          403 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCLRR  479 (500)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhhhc
Confidence            35778888888889999998432    1111111111122223344444555566677886 9999999999875444

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*

Probab=93.58  E-value=0.11  Score=42.51  Aligned_cols=74  Identities=15%  Similarity=0.120  Sum_probs=46.7

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhccc-------c---cCCC-CCch---HHHHHHHHHHhhcchhhhhhhhhhcChHHHHHH
Q psy15494         52 IRKAARAALILVPLFGLHHILLPF-------R---PEPK-SPWE---MVYDVFSAVLVSSQGLCVSILFCFANVDVHGAF  117 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~~-------~---~~~~-~~~~---~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~  117 (149)
                      .+|.+|..+.++..+-+.|+-...       .   .... ....   ..+.+++..+.-+....=.++|+++|+|.|+++
T Consensus       408 ~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~  487 (502)
T 3odu_A          408 KRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSA  487 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHH
Confidence            367788888888888888884211       1   0000 0001   112234444555666778889999999999999


Q ss_pred             HHHHHHhh
Q psy15494        118 RKMFYRLQ  125 (149)
Q Consensus       118 ~r~~~r~~  125 (149)
                      ++.+++.+
T Consensus       488 ~~ll~~~~  495 (502)
T 3odu_A          488 QHALTSGR  495 (502)
T ss_dssp             HHHHSSCS
T ss_pred             HHHhccCC
Confidence            99876544

>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}

Probab=93.50  E-value=0.77  Score=34.80  Aligned_cols=74  Identities=14%  Similarity=0.064  Sum_probs=42.6

Q ss_pred             hhhHHHHHHHHHHHhhhhhhhhhcc-------cccCCCCCc----hH---HHHHHHHHHhhcchhhhhhhhhhcChHHHH
Q psy15494         50 IGIRKAARAALILVPLFGLHHILLP-------FRPEPKSPW----EM---VYDVFSAVLVSSQGLCVSILFCFANVDVHG  115 (149)
Q Consensus        50 ~~~~~~~k~~~~L~pLLGltW~~g~-------~~~~~~~~~----~~---~~~ylF~ilnslQG~fIfl~yC~~n~eVr~  115 (149)
                      ++.+|..|..+..+..+-+.|.-..       +...+..+.    ..   ....+...+.-+....=-++|+++|+|.|+
T Consensus       207 ~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~  286 (296)
T 2lnl_A          207 GQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRH  286 (296)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHH
T ss_pred             hhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence            3446778888888888888887321       111110000    01   111122223333444567799999999999


Q ss_pred             HHHHHHHH
Q psy15494        116 AFRKMFYR  123 (149)
Q Consensus       116 ~~~r~~~r  123 (149)
                      +++|..++
T Consensus       287 ~~~~ll~c  294 (296)
T 2lnl_A          287 GFLKILAM  294 (296)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhcC
Confidence            99987643

>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}

Probab=92.77  E-value=0.34  Score=39.25  Aligned_cols=74  Identities=7%  Similarity=-0.024  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHhhhhhhhhhc-c------cccCCCCC-c-hHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHH
Q psy15494         53 RKAARAALILVPLFGLHHILL-P------FRPEPKSP-W-EMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYR  123 (149)
Q Consensus        53 ~~~~k~~~~L~pLLGltW~~g-~------~~~~~~~~-~-~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r  123 (149)
                      +|++|..+.++.++-+.|+=. +      +...+... . .....++...+.-+....=.++|+++|+|.|+++++.+++
T Consensus       386 ~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~  465 (484)
T 3vw7_A          386 SRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCC  465 (484)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC----------
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhh
Confidence            567777788888888888822 1      11111111 1 1222234444555556677889999999999999998765


Q ss_pred             hhc
Q psy15494        124 LQR  126 (149)
Q Consensus       124 ~~~  126 (149)
                      .++
T Consensus       466 ~~~  468 (484)
T 3vw7_A          466 KES  468 (484)
T ss_dssp             ---
T ss_pred             ccC
Confidence            554

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*

Probab=92.10  E-value=0.28  Score=41.08  Aligned_cols=71  Identities=18%  Similarity=0.146  Sum_probs=42.9

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc-------cccCCC-C-CchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHH
Q psy15494         52 IRKAARAALILVPLFGLHHILLP-------FRPEPK-S-PWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFY  122 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~-------~~~~~~-~-~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~  122 (149)
                      -+|.+|..+.++.++-+.|+=..       +..... . .....+...++.+||   .+=-++|+++|++.|+++++.++
T Consensus       416 ~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns---~~NPiiY~~~~~~fr~~~~~~~~  492 (520)
T 3v2y_A          416 NVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNS---GTNPIIYTLTNKEMRRAFIRIMG  492 (520)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGG---GTHHHHHHHHCHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHH---HHHHHHHHHcCHHHHHHHHHHHH
Confidence            35677888888888888888321       111111 0 111222233444555   45566899999999999998776


Q ss_pred             Hhh
Q psy15494        123 RLQ  125 (149)
Q Consensus       123 r~~  125 (149)
                      +..
T Consensus       493 ~~~  495 (520)
T 3v2y_A          493 RPL  495 (520)
T ss_dssp             SCC
T ss_pred             Hhc
Confidence            544

>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}

Probab=91.17  E-value=0.31  Score=40.73  Aligned_cols=71  Identities=14%  Similarity=0.176  Sum_probs=35.1

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhcc-------cccCCCCCch--HHHHHHHHH---HhhcchhhhhhhhhhcChHHHHHHHH
Q psy15494         52 IRKAARAALILVPLFGLHHILLP-------FRPEPKSPWE--MVYDVFSAV---LVSSQGLCVSILFCFANVDVHGAFRK  119 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g~-------~~~~~~~~~~--~~~~ylF~i---lnslQG~fIfl~yC~~n~eVr~~~~r  119 (149)
                      .||++|..++++-.+-+.|+=.+       +..+...+..  .+..+++.+   |.-+--..=-++|+++|+|.|++++|
T Consensus       404 erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~  483 (510)
T 4grv_A          404 LRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFLS  483 (510)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            35788888888888999998321       1111111110  111122111   11111223346899999999999998


Q ss_pred             HHH
Q psy15494        120 MFY  122 (149)
Q Consensus       120 ~~~  122 (149)
                      .++
T Consensus       484 iL~  486 (510)
T 4grv_A          484 TLA  486 (510)
T ss_dssp             ---
T ss_pred             HHh
Confidence            764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	149
d1u19a_	348	Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}	97.49

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.49  E-value=7e-05  Score=56.96  Aligned_cols=75  Identities=9%  Similarity=0.194  Sum_probs=47.0

Q ss_pred             hHHHHHHHHHHHhhhhhhhhhc----ccc-cCCCCCchHHHHHHHHHHhhcchhhhhhhhhhcChHHHHHHHHHHHHhhc
Q psy15494         52 IRKAARAALILVPLFGLHHILL----PFR-PEPKSPWEMVYDVFSAVLVSSQGLCVSILFCFANVDVHGAFRKMFYRLQR  126 (149)
Q Consensus        52 ~~~~~k~~~~L~pLLGltW~~g----~~~-~~~~~~~~~~~~ylF~ilnslQG~fIfl~yC~~n~eVr~~~~r~~~r~~~  126 (149)
                      .+|..|..+.++..+-+.|.-.    +.. ..+.......+.++...+.-+...+=.++|+++|+|.|+++++.+.+.++
T Consensus       247 ~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiIY~~~~~~fR~~~~~~l~c~~~  326 (348)
T d1u19a_         247 EKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN  326 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSSCC
T ss_pred             HhhHhheEEEeehHHHHHhhHHHhhhheeeccCCccccHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCC
Confidence            4677788888888888888742    111 11112222333344444444444566788999999999999998864443