Psyllid ID: psy15518
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 195 | ||||||
| 307180612 | 973 | Potassium voltage-gated channel subfamil | 0.733 | 0.146 | 0.784 | 2e-64 | |
| 270008891 | 914 | hypothetical protein TcasGA2_TC015503 [T | 0.728 | 0.155 | 0.784 | 4e-63 | |
| 189238251 | 937 | PREDICTED: similar to AGAP007709-PA [Tri | 0.728 | 0.151 | 0.784 | 4e-63 | |
| 291237039 | 1288 | PREDICTED: voltage-gated channel, putati | 0.743 | 0.112 | 0.729 | 2e-62 | |
| 328782740 | 1054 | PREDICTED: hypothetical protein LOC41049 | 0.738 | 0.136 | 0.751 | 3e-62 | |
| 340724576 | 1053 | PREDICTED: potassium voltage-gated chann | 0.738 | 0.136 | 0.751 | 4e-62 | |
| 241159420 | 1041 | voltage-gated channel, putative [Ixodes | 0.738 | 0.138 | 0.772 | 6e-62 | |
| 340724578 | 981 | PREDICTED: potassium voltage-gated chann | 0.748 | 0.148 | 0.748 | 7e-62 | |
| 328700860 | 1210 | PREDICTED: potassium voltage-gated chann | 0.784 | 0.126 | 0.726 | 2e-61 | |
| 328700858 | 1349 | PREDICTED: potassium voltage-gated chann | 0.784 | 0.113 | 0.726 | 2e-61 |
| >gi|307180612|gb|EFN68567.1| Potassium voltage-gated channel subfamily H member 7 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 113/144 (78%), Positives = 133/144 (92%), Gaps = 1/144 (0%)
Query: 10 VLSLGADVLPEYKLQTPRIHKWTILHYSPFKAVWDWLILILVVYTAIFTPYVAAFLLNEP 69
VLSLGADVLPEYKLQ+PRIHKWTILHYSPFKAVWDW+IL+LV+YTAIFTPYVAAF+L++P
Sbjct: 1 VLSLGADVLPEYKLQSPRIHKWTILHYSPFKAVWDWIILLLVMYTAIFTPYVAAFVLSDP 60
Query: 70 DFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPGLIALHYLRG 129
D+ +R +N + DPIV +D IVDVTFIVDI INFRTT+VN+NDEVVS+PG IA+HYL+G
Sbjct: 61 DYNSR-KNKKYSDDPIVIIDFIVDVTFIVDIIINFRTTFVNSNDEVVSHPGKIAVHYLKG 119
Query: 130 WFIIDLVAAIPFDLLIFGSETEET 153
WFIIDLVAAIPFDLL+ GS+T+ET
Sbjct: 120 WFIIDLVAAIPFDLLLVGSDTDET 143
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270008891|gb|EFA05339.1| hypothetical protein TcasGA2_TC015503 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|189238251|ref|XP_973853.2| PREDICTED: similar to AGAP007709-PA [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|291237039|ref|XP_002738449.1| PREDICTED: voltage-gated channel, putative-like [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
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| >gi|328782740|ref|XP_393977.4| PREDICTED: hypothetical protein LOC410498 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|340724576|ref|XP_003400657.1| PREDICTED: potassium voltage-gated channel subfamily H member 7-like isoform 1 [Bombus terrestris] gi|350397867|ref|XP_003485015.1| PREDICTED: potassium voltage-gated channel subfamily H member 7-like isoform 1 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|241159420|ref|XP_002408563.1| voltage-gated channel, putative [Ixodes scapularis] gi|215494354|gb|EEC03995.1| voltage-gated channel, putative [Ixodes scapularis] | Back alignment and taxonomy information |
|---|
| >gi|340724578|ref|XP_003400658.1| PREDICTED: potassium voltage-gated channel subfamily H member 7-like isoform 2 [Bombus terrestris] gi|350397870|ref|XP_003485016.1| PREDICTED: potassium voltage-gated channel subfamily H member 7-like isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|328700860|ref|XP_001947207.2| PREDICTED: potassium voltage-gated channel subfamily H member 2-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|328700858|ref|XP_003241406.1| PREDICTED: potassium voltage-gated channel subfamily H member 2-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 195 | ||||||
| UNIPROTKB|G1K2Y3 | 522 | Gga.55796 "Uncharacterized pro | 0.753 | 0.281 | 0.734 | 5.3e-56 | |
| UNIPROTKB|Q9PT84 | 526 | KCNH2 "Potassium voltage-gated | 0.753 | 0.279 | 0.734 | 5.3e-56 | |
| UNIPROTKB|F1NBY6 | 878 | Gga.55796 "Uncharacterized pro | 0.753 | 0.167 | 0.734 | 1.5e-55 | |
| MGI|MGI:1341722 | 1162 | Kcnh2 "potassium voltage-gated | 0.758 | 0.127 | 0.722 | 2.1e-54 | |
| UNIPROTKB|G5E9I0 | 888 | KCNH2 "Potassium voltage-gated | 0.758 | 0.166 | 0.722 | 2.8e-54 | |
| RGD|621414 | 1163 | Kcnh2 "potassium voltage-gated | 0.758 | 0.127 | 0.716 | 3.4e-54 | |
| UNIPROTKB|F1LN86 | 1163 | Kcnh2 "Potassium voltage-gated | 0.758 | 0.127 | 0.716 | 3.4e-54 | |
| UNIPROTKB|F1MCI9 | 1096 | Bt.103515 "Uncharacterized pro | 0.758 | 0.135 | 0.722 | 4.7e-54 | |
| UNIPROTKB|C4PFH9 | 1063 | KCNH2 "Voltage-gated potassium | 0.758 | 0.139 | 0.722 | 6.9e-54 | |
| UNIPROTKB|Q12809 | 1159 | KCNH2 "Potassium voltage-gated | 0.758 | 0.127 | 0.722 | 9.1e-54 |
| UNIPROTKB|G1K2Y3 Gga.55796 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 108/147 (73%), Positives = 123/147 (83%)
Query: 7 VFQVLSLGADVLPEYKLQTPRIHKWTILHYSPFKAVWDWLILILVVYTAIFTPYVAAFLL 66
V QVLSLGADVLPEYKLQ PRIH+WTILHYSPFKAVWDWLIL+LV+YTA+FTPY AAFLL
Sbjct: 70 VTQVLSLGADVLPEYKLQAPRIHRWTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLL 129
Query: 67 NEPDFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPGLIALHY 126
NE + N DP+ +DLIVD+ FIVDI INFRTTYVN NDEVVS+PG IA+HY
Sbjct: 130 NEEQGEEKHWNCSYSCDPLNIIDLIVDIMFIVDIVINFRTTYVNINDEVVSHPGKIAIHY 189
Query: 127 LRGWFIIDLVAAIPFDLLIFGSETEET 153
+GWF+ID+VAAIPFDLLIF S ++ET
Sbjct: 190 FKGWFLIDMVAAIPFDLLIFRSGSDET 216
|
|
| UNIPROTKB|Q9PT84 KCNH2 "Potassium voltage-gated channel subfamily H member 2" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NBY6 Gga.55796 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1341722 Kcnh2 "potassium voltage-gated channel, subfamily H (eag-related), member 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G5E9I0 KCNH2 "Potassium voltage-gated channel subfamily H member 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| RGD|621414 Kcnh2 "potassium voltage-gated channel, subfamily H (eag-related), member 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1LN86 Kcnh2 "Potassium voltage-gated channel subfamily H member 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MCI9 Bt.103515 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|C4PFH9 KCNH2 "Voltage-gated potassium channel subfamily H isoform 3.1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q12809 KCNH2 "Potassium voltage-gated channel subfamily H member 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 195 | |||
| PLN03192 | 823 | PLN03192, PLN03192, Voltage-dependent potassium ch | 2e-11 |
| >gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 2e-11
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 19 PEYKLQTPRIHKWTILHYSPFKA---VWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRT 75
P Y W I SP + W+ L+++LV Y+A P+ AFL P R
Sbjct: 40 PSYNQNHIGSDGWII---SPMDSRYRWWETLMVVLVAYSAWVYPFEVAFLNASP---KRG 93
Query: 76 RNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEV-VSNPGLIALHYLRGWFIID 134
I D +VD+ F VDI + F Y++ ++ V + IA+ YL WF++D
Sbjct: 94 LEI---------ADNVVDLFFAVDIVLTFFVAYIDPRTQLLVRDRKKIAVRYLSTWFLMD 144
Query: 135 LVAAIPFDLL 144
+ + IPF L
Sbjct: 145 VASTIPFQAL 154
|
Length = 823 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 195 | |||
| KOG0501|consensus | 971 | 99.94 | ||
| KOG0498|consensus | 727 | 99.93 | ||
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.89 | |
| KOG0500|consensus | 536 | 99.73 | ||
| KOG0499|consensus | 815 | 99.72 | ||
| PF08412 | 77 | Ion_trans_N: Ion transport protein N-terminal; Int | 98.88 | |
| PF00520 | 200 | Ion_trans: Ion transport protein calcium channel s | 97.68 | |
| KOG3713|consensus | 477 | 92.45 | ||
| KOG1545|consensus | 507 | 89.93 | ||
| KOG2302|consensus | 1956 | 81.72 |
| >KOG0501|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=215.50 Aligned_cols=171 Identities=38% Similarity=0.715 Sum_probs=151.4
Q ss_pred hhhhHHHhcCCCCCcccccccCCCCcCeEEccCChHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCccccccccCCCc
Q psy15518 4 VSVVFQVLSLGADVLPEYKLQTPRIHKWTILHYSPFKAVWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRTRNIRRYSD 83 (195)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~P~s~~~~~Wd~i~~~~~~~~~~~iP~~iaF~~~~~~~~~~~~~~~~~~~ 83 (195)
-|+.-|+..||+|.|||+.-+.|+.++.+|..++.|+-.||.++++..+|+++++||.++|.....+. .
T Consensus 181 hS~la~vm~Lg~DilPQYrQEaPKTpPHIiLHYcaFKt~WDWvIL~LTFYTAimVPyNvaFKnk~~~~-----------v 249 (971)
T KOG0501|consen 181 HSNLAEVMQLGSDILPQYRQEAPKTPPHIILHYCAFKTIWDWVILILTFYTAIMVPYNVAFKNKQRNN-----------V 249 (971)
T ss_pred chhHHHHHHhccccchhhhhcCCCCCCeEEEeeehhhhHHHHHHHHHHHHHHheeeeeeeecccccCc-----------e
Confidence 37888999999999999999999999999999999999999999999999999999999999876531 4
Q ss_pred hHHHHHHHHHHHHHHHHhHHhceeEEecCCeEEecHHHHHHHcchhhhHhhhhhhccHHHHHhhcCCcc----ccccchh
Q psy15518 84 PIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPGLIALHYLRGWFIIDLVAAIPFDLLIFGSETEE----TLDSREL 159 (195)
Q Consensus 84 ~~~~i~~i~dv~f~iDIil~f~t~y~d~~G~~V~d~~~Ia~~Ylk~~F~~Dlis~lPl~~i~~~~~~~~----~l~~~rl 159 (195)
.|.++|.++|++|++||+++|+|.|..+.|++|.||+.|+.||+|+||++|++|++|+|++..+-...+ .....|+
T Consensus 250 s~lvvDSiVDVIF~vDIvLNFHTTFVGPgGEVvsdPkvIRmNYlKsWFvIDLLSCLPYDi~naF~~~degI~SLFSaLKV 329 (971)
T KOG0501|consen 250 SWLVVDSIVDVIFFVDIVLNFHTTFVGPGGEVVSDPKVIRMNYLKSWFVIDLLSCLPYDIFNAFERDDEGIGSLFSALKV 329 (971)
T ss_pred eEEEecchhhhhhhhhhhhhcceeeecCCCceecChhHHhHHHHHHHHHHHHHhcccHHHHHHhhcccccHHHHHHHHHH
Confidence 577889999999999999999999999889999999999999999999999999999999986654333 2456799
Q ss_pred hhHhhHHHHHHHHHHHHHhhhhhhhhHH
Q psy15518 160 PLSMSIEMHFKLLTSVMTKWIGLKRLTL 187 (195)
Q Consensus 160 ~rllk~~rlf~~l~~~~~k~~~~~r~~~ 187 (195)
+|++|+-|.-.++++-.+ +|+.=..+
T Consensus 330 VRLLRLGRVaRKLD~YlE--YGAA~LvL 355 (971)
T KOG0501|consen 330 VRLLRLGRVARKLDHYLE--YGAAVLVL 355 (971)
T ss_pred HHHHHHHHHHHHHHHHHH--hhHHHHHH
Confidence 999999999999988665 46654443
|
|
| >KOG0498|consensus | Back alignment and domain information |
|---|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
| >KOG0500|consensus | Back alignment and domain information |
|---|
| >KOG0499|consensus | Back alignment and domain information |
|---|
| >PF08412 Ion_trans_N: Ion transport protein N-terminal; InterPro: IPR013621 This domain is found to the N terminus of IPR005821 from INTERPRO in voltage- and cyclic nucleotide-gated K/Na ion channels | Back alignment and domain information |
|---|
| >PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins | Back alignment and domain information |
|---|
| >KOG3713|consensus | Back alignment and domain information |
|---|
| >KOG1545|consensus | Back alignment and domain information |
|---|
| >KOG2302|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 195 | |||
| 1orq_C | 223 | Potassium channel; voltage-dependent, KVAP, FAB co | 98.78 | |
| 2r9r_B | 514 | Paddle chimera voltage gated potassium channel KV; | 97.95 | |
| 2kyh_A | 147 | KVAP, voltage-gated potassium channel; ION channel | 97.85 | |
| 1ors_C | 132 | Potassium channel; voltage-dependent, voltage sens | 97.81 | |
| 3rvy_A | 285 | ION transport protein; tetrameric ION channel, vol | 96.71 | |
| 3beh_A | 355 | MLL3241 protein; transmembrane protein, membrane p | 96.27 | |
| 4dxw_A | 229 | Navrh, ION transport protein; tetrameric, voltage- | 95.77 |
| >1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.2e-08 Score=82.71 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCccccccccCCCchHHHHHHHHHHHHHHHHhHHhceeEEecCCeEEecHHH
Q psy15518 42 VWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPGL 121 (195)
Q Consensus 42 ~Wd~i~~~~~~~~~~~iP~~iaF~~~~~~~~~~~~~~~~~~~~~~~i~~i~dv~f~iDIil~f~t~y~d~~G~~V~d~~~ 121 (195)
.||..++++.+++...+........+.. +...+..+|.+++++|.+|+++++.++. +
T Consensus 9 ~f~~~i~~lil~~~~~~~~~~~~~~~~~-----------~~~~l~~~d~~~~~iF~~e~~lr~~~~~---------~--- 65 (223)
T 1orq_C 9 LVELGVSYAALLSVIVVVVECTMQLSGE-----------YLVRLYLVDLILVIILWADYAYRAYKSG---------D--- 65 (223)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHTTC-----------TTTHHHHHHHHHHHHHHHHHHHHHHTTS---------C---
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcccChh-----------hhhHHHHHHHHHHHHHHHHHHHHHcccc---------c---
Confidence 5899999999999998887753322221 1256788999999999999999999862 2
Q ss_pred HHHHcchhhhHhhhhhhccHHHHHhh-cCC--ccccccchhhhHhhHHHHHH
Q psy15518 122 IALHYLRGWFIIDLVAAIPFDLLIFG-SET--EETLDSRELPLSMSIEMHFK 170 (195)
Q Consensus 122 Ia~~Ylk~~F~~Dlis~lPl~~i~~~-~~~--~~~l~~~rl~rllk~~rlf~ 170 (195)
.++|+|+ +++|++|++|++..... .+. ...++..|++|++|+.|+++
T Consensus 66 -~~~y~~~-~iiDllailP~~~~~~~~~~~~~~~~lr~lRllRllR~~r~~~ 115 (223)
T 1orq_C 66 -PAGYVKK-TLYEIPALVPAGLLALIEGHLAGLGLFRLVRLLRFLRILLIIS 115 (223)
T ss_dssp -HHHHHHH-HHHHCTTHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHH-hHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 3689988 99999999999876531 111 12344444444444444444
|
| >2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* | Back alignment and structure |
|---|
| >2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix} | Back alignment and structure |
|---|
| >1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1 | Back alignment and structure |
|---|
| >3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A* | Back alignment and structure |
|---|
| >3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* | Back alignment and structure |
|---|
| >4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 195 | |||
| d1orsc_ | 132 | Potassium channel KVAP {Archaeon Aeropyrum pernix | 97.72 |
| >d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Voltage-gated potassium channels superfamily: Voltage-gated potassium channels family: Voltage-gated potassium channels domain: Potassium channel KVAP species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=97.72 E-value=6.7e-05 Score=54.58 Aligned_cols=108 Identities=15% Similarity=0.167 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccCCCCCccccccccCCCchHHHHHHHHHHHHHHHHhHHhceeEEecCCeEEecHHH
Q psy15518 42 VWDWLILILVVYTAIFTPYVAAFLLNEPDFTNRTRNIRRYSDPIVFVDLIVDVTFIVDIAINFRTTYVNANDEVVSNPGL 121 (195)
Q Consensus 42 ~Wd~i~~~~~~~~~~~iP~~iaF~~~~~~~~~~~~~~~~~~~~~~~i~~i~dv~f~iDIil~f~t~y~d~~G~~V~d~~~ 121 (195)
..|..+.++++.+...+-.+-- ++...+ +...+..+|.++-++|.+|.++++-.+ | ++
T Consensus 7 ~~e~~i~~lillnvi~~~let~-~~~~~~----------~~~~l~~~e~v~~~iF~~E~~lrl~~~-----~----~~-- 64 (132)
T d1orsc_ 7 LVELGVSYAALLSVIVVVVEYT-MQLSGE----------YLVRLYLVDLILVIILWADYAYRAYKS-----G----DP-- 64 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-SCCCSH----------HHHHHHHHHHHHHHHHHHHHHHHHHHT-----T----ST--
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-cccchh----------hhHHHHHHHHHHHHHHHHHHHHHHHhC-----C----cc--
Confidence 4677888888888887766642 221111 124568899999999999999998743 1 11
Q ss_pred HHHHcchhhhHhhhhhhccHHHHHhhcCCccccccchhhhHhhHHHHHHHHHH
Q psy15518 122 IALHYLRGWFIIDLVAAIPFDLLIFGSETEETLDSRELPLSMSIEMHFKLLTS 174 (195)
Q Consensus 122 Ia~~Ylk~~F~~Dlis~lPl~~i~~~~~~~~~l~~~rl~rllk~~rlf~~l~~ 174 (195)
.+|.+ |-++|+++++|........+....++..|+.|++|+.|+.+..++
T Consensus 65 --~~~~~-~~~iDl~ai~p~~~~~~~~~~~~~lr~lR~~R~~R~lrl~~~~~~ 114 (132)
T d1orsc_ 65 --AGYVK-KTLYEIPALVPAGLLALIEGHLAGLGLFRLVRLLRFLRILLIISR 114 (132)
T ss_dssp --TTTTT-TCGGGTGGGSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred --ceeCC-cchHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12443 357999999998765544332234555555555555555554433
|