Psyllid ID: psy15579

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
IAARFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFVRTIYELEPSRVAC
cccccccEEEEccccccHHHHHHHHHHHcccccccEEEEEEccEEEEEEEEEEEEEEEcccEEEEEEcccccccccccccccEEEEEccccccccccEEEEEEcccccccccccccEEEEccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccHHHHHccccEEEEEccHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHHHccccEEEEEEcccccHHHHcccccHHHHcccccccEEEEEEcHHccccccccHHHHHHHHHHcccccEEEEccccccccHHHHHHHHccccccccEEEEEcccEEEEEccccccccccc
ccccccEEEEEccEEccEEccHHHHHHHHHHccccEEEEEEEEcccHHHHcEEEEEEcccccEEEEEccccccccccccccccEEEEcccccccccEEEEEEEEcccccccHHHccEEEEEcHHHcccHHHHHHHHHHHcEEEEEcHHHcccHHHHHHHHHHHHHccEEEEcHHHHHcccccHHHEEccccEcHHHHHHHcccccEEEEEEcHHHccccHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHccccEEEEcEEEEccEEEEEHcccccEEEEEEcHHHccccHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHccccEEEEcEEEEccEEEEEEcccccccccc
IAARFESTIiigehadgklsaSTLSAITAAQKIGGDISVLVAGSKVADVSNAILtlkskdpvkvvtvrgtsfppaakggsaSVEALANASVEANKLSEWvgqelsksdrpdlgsakivvsggrglksadNFKLLYTLADKLGAAvgrglksadNFKLLYTLADKLGAAvgasraavdagfvpndmqigqtgkiiapqvskisgVTKVLTVENDalkgllpenlaPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALldvspisdiidikspdtfqvskisgVTKVLTVENDalkgllpenlaPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALldvspisdiidikspdtFVRTIYElepsrvac
iaarfestiiigehadgklsaSTLSAITAAQKIGGDISVLVAGSKVADVSNAiltlkskdpvkvvTVRGTsfppaakggsaSVEALANASVEANKLSEWVGQelsksdrpdlgsAKIVVsggrglksadNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDiidikspdtfqvsKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPisdiidikspdtFVRTIYELEPSRVAC
IAARFESTIIIGEHADGKlsastlsaitaaQKIGGDISVLVAGSKVADVSNAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLgaavgasraavdagFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLdvspisdiidikspdTFQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLdvspisdiidikspdTFVRTIYELEPSRVAC
*******TIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSKDPVKVVTVRG***********************************************IVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFVRTIYEL*******
***RFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSKDPVKVVTVRGTSFPPA************NASVEANKL***************LGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFVRTIYELEPSRVAC
IAARFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFVRTIYELEPSRVAC
**ARFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFVRTIYELEPS****
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IAARFESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALLDVSPISDIIDIKSPDTFVRTIYELEPSRVAC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query368 2.2.26 [Sep-21-2011]
Q93615332 Probable electron transfe yes N/A 0.404 0.448 0.508 6e-40
P13804333 Electron transfer flavopr yes N/A 0.347 0.384 0.547 3e-35
Q9HZP7309 Electron transfer flavopr yes N/A 0.350 0.417 0.551 3e-35
Q8HXY0333 Electron transfer flavopr N/A N/A 0.347 0.384 0.541 4e-35
Q5RC31333 Electron transfer flavopr yes N/A 0.347 0.384 0.541 1e-34
Q99LC5333 Electron transfer flavopr yes N/A 0.353 0.390 0.516 3e-33
P53573314 Electron transfer flavopr yes N/A 0.353 0.414 0.490 2e-31
P13803333 Electron transfer flavopr yes N/A 0.353 0.390 0.522 2e-31
Q2KJE4333 Electron transfer flavopr yes N/A 0.353 0.390 0.503 1e-30
P38974308 Electron transfer flavopr yes N/A 0.350 0.418 0.464 8e-28
>sp|Q93615|ETFA_CAEEL Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=F27D4.1 PE=3 SV=2 Back     alignment and function desciption
 Score =  165 bits (417), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/181 (50%), Positives = 117/181 (64%), Gaps = 32/181 (17%)

Query: 18  KLSASTLSAITAAQKIGGDISVLVAGSKVADVSNAILTLKSKDPVKVVTVRGTSFPPAAK 77
           KL  S++S +T           L AG       NA+  +KS  P+K++T RGTSF PA +
Sbjct: 127 KLDVSSISDVTEVHSADSFTRTLYAG-------NAVKKVKSTAPIKLLTFRGTSFEPAKE 179

Query: 78  GGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTL 137
           GGS +VE   +A ++ + LSE++GQELSKS+RPDL +AK+VVSGGRGLK           
Sbjct: 180 GGSGAVENAPSADIKTD-LSEFLGQELSKSERPDLATAKVVVSGGRGLK----------- 227

Query: 138 ADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQ 197
                        S DNFKL+Y LADKLGA VGASRAAVDAG+VPNDMQ+GQTGKI+AP+
Sbjct: 228 -------------SGDNFKLIYDLADKLGAGVGASRAAVDAGYVPNDMQVGQTGKIVAPE 274

Query: 198 V 198
           +
Sbjct: 275 L 275
The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).
Caenorhabditis elegans (taxid: 6239)
>sp|P13804|ETFA_HUMAN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Homo sapiens GN=ETFA PE=1 SV=1 Back     alignment and function description
>sp|Q9HZP7|ETFA_PSEAE Electron transfer flavoprotein subunit alpha OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=etfA PE=3 SV=1 Back     alignment and function description
>sp|Q8HXY0|ETFA_MACFA Electron transfer flavoprotein subunit alpha, mitochondrial OS=Macaca fascicularis GN=ETFA PE=2 SV=1 Back     alignment and function description
>sp|Q5RC31|ETFA_PONAB Electron transfer flavoprotein subunit alpha, mitochondrial OS=Pongo abelii GN=ETFA PE=2 SV=1 Back     alignment and function description
>sp|Q99LC5|ETFA_MOUSE Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus GN=Etfa PE=1 SV=2 Back     alignment and function description
>sp|P53573|ETFA_BRAJA Electron transfer flavoprotein subunit alpha OS=Bradyrhizobium japonicum (strain USDA 110) GN=etfA PE=3 SV=2 Back     alignment and function description
>sp|P13803|ETFA_RAT Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus GN=Etfa PE=1 SV=4 Back     alignment and function description
>sp|Q2KJE4|ETFA_BOVIN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Bos taurus GN=ETFA PE=2 SV=1 Back     alignment and function description
>sp|P38974|ETFA_PARDE Electron transfer flavoprotein subunit alpha OS=Paracoccus denitrificans GN=etfA PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
195441927330 GK17923 [Drosophila willistoni] gi|19416 0.353 0.393 0.621 3e-41
195124666330 GI18385 [Drosophila mojavensis] gi|19391 0.353 0.393 0.602 3e-40
195380944330 GJ21462 [Drosophila virilis] gi|19414401 0.353 0.393 0.602 5e-40
194756558330 GF13409 [Drosophila ananassae] gi|190621 0.353 0.393 0.608 6e-40
195485665330 wal [Drosophila yakuba] gi|194177284|gb| 0.353 0.393 0.608 1e-39
194883909330 GG22634 [Drosophila erecta] gi|190659226 0.353 0.393 0.608 2e-39
195582506330 GD25889 [Drosophila simulans] gi|1941930 0.353 0.393 0.608 2e-39
17136898330 walrus, isoform B [Drosophila melanogast 0.353 0.393 0.608 2e-39
38048531237 similar to Drosophila melanogaster wal, 0.353 0.548 0.608 2e-39
28317158340 LD07532p, partial [Drosophila melanogast 0.353 0.382 0.608 2e-39
>gi|195441927|ref|XP_002068713.1| GK17923 [Drosophila willistoni] gi|194164798|gb|EDW79699.1| GK17923 [Drosophila willistoni] Back     alignment and taxonomy information
 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/156 (62%), Positives = 112/156 (71%), Gaps = 26/156 (16%)

Query: 51  NAILTLKSKDPVKVVTVRGTSFPPAA-KGGSASVEALANASVEANKLSEWVGQELSKSDR 109
           NAILTLKSKDPVKV+TVRGT+FPPAA  GGS +VE  A A   A+ LSE+V QEL+KSDR
Sbjct: 151 NAILTLKSKDPVKVITVRGTNFPPAATTGGSGAVEQ-APAGDYASSLSEFVSQELTKSDR 209

Query: 110 PDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAV 169
           P+L  AK++VSGGRGLKS DNFKLLY LAD                        K GAAV
Sbjct: 210 PELTGAKVIVSGGRGLKSGDNFKLLYDLAD------------------------KFGAAV 245

Query: 170 GASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVT 205
           GASRAAVDAGFVPND+QIGQTGKI+AP++    G++
Sbjct: 246 GASRAAVDAGFVPNDLQIGQTGKIVAPELYIAVGIS 281

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|195124666|ref|XP_002006812.1| GI18385 [Drosophila mojavensis] gi|193911880|gb|EDW10747.1| GI18385 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195380944|ref|XP_002049216.1| GJ21462 [Drosophila virilis] gi|194144013|gb|EDW60409.1| GJ21462 [Drosophila virilis] Back     alignment and taxonomy information
>gi|194756558|ref|XP_001960544.1| GF13409 [Drosophila ananassae] gi|190621842|gb|EDV37366.1| GF13409 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|195485665|ref|XP_002091183.1| wal [Drosophila yakuba] gi|194177284|gb|EDW90895.1| wal [Drosophila yakuba] Back     alignment and taxonomy information
>gi|194883909|ref|XP_001976039.1| GG22634 [Drosophila erecta] gi|190659226|gb|EDV56439.1| GG22634 [Drosophila erecta] Back     alignment and taxonomy information
>gi|195582506|ref|XP_002081068.1| GD25889 [Drosophila simulans] gi|194193077|gb|EDX06653.1| GD25889 [Drosophila simulans] Back     alignment and taxonomy information
>gi|17136898|ref|NP_476975.1| walrus, isoform B [Drosophila melanogaster] gi|24652801|ref|NP_725073.1| walrus, isoform A [Drosophila melanogaster] gi|4972696|gb|AAD34743.1| unknown [Drosophila melanogaster] gi|7303574|gb|AAF58627.1| walrus, isoform A [Drosophila melanogaster] gi|21627448|gb|AAM68717.1| walrus, isoform B [Drosophila melanogaster] gi|220943756|gb|ACL84421.1| CG8996-PA [synthetic construct] gi|220953656|gb|ACL89371.1| wal-PA [synthetic construct] Back     alignment and taxonomy information
>gi|38048531|gb|AAR10168.1| similar to Drosophila melanogaster wal, partial [Drosophila yakuba] Back     alignment and taxonomy information
>gi|28317158|gb|AAD46853.2|AF160913_1 LD07532p, partial [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
WB|WBGene00009187332 F27D4.1 [Caenorhabditis elegan 0.277 0.307 0.601 6.3e-35
ZFIN|ZDB-GENE-030131-4449339 etfa "electron-transfer-flavop 0.277 0.300 0.601 1e-32
UNIPROTKB|P13804333 ETFA "Electron transfer flavop 0.271 0.300 0.590 1.1e-31
RGD|628747333 Etfa "electron-transfer-flavop 0.274 0.303 0.596 2.3e-31
UNIPROTKB|F1SJX1333 ETFA "Uncharacterized protein" 0.274 0.303 0.576 2.3e-31
MGI|MGI:106092333 Etfa "electron transferring fl 0.274 0.303 0.576 3.8e-31
UNIPROTKB|E2RAE2333 ETFA "Uncharacterized protein" 0.274 0.303 0.576 3.8e-31
FB|FBgn0010516340 wal "walrus" [Drosophila melan 0.407 0.441 0.529 3e-30
UNIPROTKB|E1BZW5323 ETFA "Uncharacterized protein" 0.274 0.312 0.567 6.8e-30
UNIPROTKB|F1N9U8346 ETFA "Uncharacterized protein" 0.274 0.291 0.567 6.8e-30
WB|WBGene00009187 F27D4.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
 Score = 311 (114.5 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
 Identities = 62/103 (60%), Positives = 80/103 (77%)

Query:    51 NAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRP 110
             NA+  +KS  P+K++T RGTSF PA +GGS +VE   +A ++ + LSE++GQELSKS+RP
Sbjct:   153 NAVKKVKSTAPIKLLTFRGTSFEPAKEGGSGAVENAPSADIKTD-LSEFLGQELSKSERP 211

Query:   111 DLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSAD 153
             DL +AK+VVSGGRGLKS DNFKL+Y LADKLGA VG    + D
Sbjct:   212 DLATAKVVVSGGRGLKSGDNFKLIYDLADKLGAGVGASRAAVD 254
GO:0009055 "electron carrier activity" evidence=IEA
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP
GO:0000003 "reproduction" evidence=IMP
GO:0005739 "mitochondrion" evidence=IDA
ZFIN|ZDB-GENE-030131-4449 etfa "electron-transfer-flavoprotein, alpha polypeptide" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P13804 ETFA "Electron transfer flavoprotein subunit alpha, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|628747 Etfa "electron-transfer-flavoprotein, alpha polypeptide" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1SJX1 ETFA "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:106092 Etfa "electron transferring flavoprotein, alpha polypeptide" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RAE2 ETFA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0010516 wal "walrus" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E1BZW5 ETFA "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N9U8 ETFA "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9HZP7ETFA_PSEAENo assigned EC number0.55120.35050.4174yesN/A
Q93615ETFA_CAEELNo assigned EC number0.50820.40480.4487yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
PLN00022356 PLN00022, PLN00022, electron transfer flavoprotein 7e-38
COG2025313 COG2025, FixB, Electron transfer flavoprotein, alp 5e-33
cd01715168 cd01715, ETF_alpha, The electron transfer flavopro 5e-28
cd01715168 cd01715, ETF_alpha, The electron transfer flavopro 5e-26
pfam0076686 pfam00766, ETF_alpha, Electron transfer flavoprote 8e-25
cd01985181 cd01985, ETF, The electron transfer flavoprotein ( 2e-20
cd01985181 cd01985, ETF, The electron transfer flavoprotein ( 1e-19
PLN00022 356 PLN00022, PLN00022, electron transfer flavoprotein 2e-19
pfam01012160 pfam01012, ETF, Electron transfer flavoprotein dom 5e-17
PLN00022 356 PLN00022, PLN00022, electron transfer flavoprotein 2e-16
pfam01012160 pfam01012, ETF, Electron transfer flavoprotein dom 3e-16
COG2025 313 COG2025, FixB, Electron transfer flavoprotein, alp 2e-15
smart00893185 smart00893, ETF, Electron transfer flavoprotein do 3e-15
COG2025313 COG2025, FixB, Electron transfer flavoprotein, alp 2e-14
smart00893185 smart00893, ETF, Electron transfer flavoprotein do 3e-13
cd01715168 cd01715, ETF_alpha, The electron transfer flavopro 1e-08
cd01715168 cd01715, ETF_alpha, The electron transfer flavopro 2e-05
PLN00022356 PLN00022, PLN00022, electron transfer flavoprotein 7e-05
>gnl|CDD|215032 PLN00022, PLN00022, electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information 
 Score =  138 bits (350), Expect = 7e-38
 Identities = 69/155 (44%), Positives = 93/155 (60%), Gaps = 32/155 (20%)

Query: 51  NAILTLKSKD-PVKVVTVRGTSFP-----PAAKGGSASVEA--LANASVEANKLSEWVGQ 102
           NA+ T++ K     ++++R TSFP       ++   A +    L+    ++   S WVG 
Sbjct: 165 NALATVRYKGSGPCMLSIRPTSFPVTPALANSESNEAPISQVDLSLLDEDSVGKSRWVGL 224

Query: 103 ELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLA 162
            +  ++RPDLGSAK+VV+GGRGLKSA+NFK+L  LADKLG AVG                
Sbjct: 225 SVQDTERPDLGSAKVVVTGGRGLKSAENFKMLEKLADKLGGAVG---------------- 268

Query: 163 DKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQ 197
                   ASRAAVDAGFVPND+Q+GQTGKI+AP+
Sbjct: 269 --------ASRAAVDAGFVPNDLQVGQTGKIVAPE 295

Length = 356
>gnl|CDD|224936 COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|238848 cd01715, ETF_alpha, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>gnl|CDD|238848 cd01715, ETF_alpha, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>gnl|CDD|189709 pfam00766, ETF_alpha, Electron transfer flavoprotein FAD-binding domain Back     alignment and domain information
>gnl|CDD|238943 cd01985, ETF, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>gnl|CDD|238943 cd01985, ETF, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>gnl|CDD|215032 PLN00022, PLN00022, electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|216243 pfam01012, ETF, Electron transfer flavoprotein domain Back     alignment and domain information
>gnl|CDD|215032 PLN00022, PLN00022, electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|216243 pfam01012, ETF, Electron transfer flavoprotein domain Back     alignment and domain information
>gnl|CDD|224936 COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|214890 smart00893, ETF, Electron transfer flavoprotein domain Back     alignment and domain information
>gnl|CDD|224936 COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|214890 smart00893, ETF, Electron transfer flavoprotein domain Back     alignment and domain information
>gnl|CDD|238848 cd01715, ETF_alpha, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>gnl|CDD|238848 cd01715, ETF_alpha, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>gnl|CDD|215032 PLN00022, PLN00022, electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 368
COG2025313 FixB Electron transfer flavoprotein, alpha subunit 100.0
PLN00022356 electron transfer flavoprotein subunit alpha; Prov 100.0
KOG3954|consensus336 100.0
PRK03363313 fixB putative electron transfer flavoprotein FixB; 100.0
PRK11916312 electron transfer flavoprotein subunit YdiR; Provi 100.0
PF0076686 ETF_alpha: Electron transfer flavoprotein FAD-bind 100.0
PLN00022 356 electron transfer flavoprotein subunit alpha; Prov 99.9
cd01715168 ETF_alpha The electron transfer flavoprotein (ETF) 99.89
PF01012164 ETF: Electron transfer flavoprotein domain; InterP 99.89
cd01985181 ETF The electron transfer flavoprotein (ETF) serve 99.88
COG2025 313 FixB Electron transfer flavoprotein, alpha subunit 99.84
PRK03363 313 fixB putative electron transfer flavoprotein FixB; 99.83
PRK11916 312 electron transfer flavoprotein subunit YdiR; Provi 99.82
cd01714202 ETF_beta The electron transfer flavoprotein (ETF) 99.8
KOG3954|consensus 336 99.71
cd01715168 ETF_alpha The electron transfer flavoprotein (ETF) 99.14
PF01012164 ETF: Electron transfer flavoprotein domain; InterP 98.8
cd01985181 ETF The electron transfer flavoprotein (ETF) serve 98.74
PF0076686 ETF_alpha: Electron transfer flavoprotein FAD-bind 98.06
PRK12342254 hypothetical protein; Provisional 98.01
PRK03359256 putative electron transfer flavoprotein FixA; Revi 97.95
COG2086260 FixA Electron transfer flavoprotein, beta subunit 97.63
KOG3180|consensus254 95.74
cd01714202 ETF_beta The electron transfer flavoprotein (ETF) 94.36
PRK07710 571 acetolactate synthase catalytic subunit; Reviewed 80.36
>COG2025 FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-57  Score=444.18  Aligned_cols=225  Identities=41%  Similarity=0.539  Sum_probs=197.0

Q ss_pred             cceEEEEEccCCccChHHHHHHHHHHHhCCcEEEEEeCCCcc--------------------------------------
Q psy15579          6 ESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVA--------------------------------------   47 (368)
Q Consensus         6 ~~i~v~~e~~~g~~~~~~~e~~~~a~~l~~~v~~~~~g~~~~--------------------------------------   47 (368)
                      +.+|||+||.+|+++++|+|++++|+++| ++.++|+|....                                      
T Consensus         1 ~~vlv~~e~~~~~l~~~s~el~~~A~~l~-~v~~vv~g~~~~~~~~~~Gad~v~~~~~~~~~~~~~e~~~~~l~~l~~~~   79 (313)
T COG2025           1 MKVLVVAEHDGGRLSPVSLELLTAARKLG-DVAAVVIGEGAAAAAKAYGADKVLVAEGPELANYLPEPYADALVDLAKKY   79 (313)
T ss_pred             CeEEEEecCCCCccchhhHHHHHHHHhcC-ceEEEEechHHHHHHhhcCCCEEEEEcccchhccchhHHHHHHHHHHHhc
Confidence            46999999999999999999999999999 999999998321                                      


Q ss_pred             ------------------------------cc-----------------cceeeEEEeCC-CcEEEEEcCCCCCCCcCCC
Q psy15579         48 ------------------------------DV-----------------SNAILTLKSKD-PVKVVTVRGTSFPPAAKGG   79 (368)
Q Consensus        48 ------------------------------d~-----------------g~~~~~i~~~~-~p~~~tvrpg~f~~~~~~~   79 (368)
                                                    ||                 ||+++|+.+++ +|+|+|+|||+|++.+...
T Consensus        80 ~p~~il~~aT~~Gk~la~rvAa~l~~~~~~D~~~l~~~~~l~~~Rp~ygG~~i~~~~~~~~~~~v~Tvr~g~~~~~~~~~  159 (313)
T COG2025          80 KPDVVLLPATTNGKELAPRVAARLDVGLIADVTSLDVGDGLTFTRPIYGGNAIATVISPSGRPAVITVRPGVFAAAAAAL  159 (313)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHcCCCceEEEEEEEcCCccEEEeeccccceeEEEecCCCCceEEEEcccccCCCCCCC
Confidence                                          11                 99999999965 7999999999999866333


Q ss_pred             CceEEEeeccccccCCceEEEeeeecCCCCCCCCCCCEEEEeCcccccccchhhhhhhhhhhhhccccCcccccchhhHH
Q psy15579         80 SASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLY  159 (368)
Q Consensus        80 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~vV~~GrG~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  159 (368)
                      .++++...........+..........++++||++||+|||||||++++|||+++                        +
T Consensus       160 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~L~~A~iVVsgGRG~gs~enf~~i------------------------~  215 (313)
T COG2025         160 GGSVETEKVVAPANAIAVVSTGFSLKKSGRVDLAEAKIVVSGGRGLGSKENFKLL------------------------E  215 (313)
T ss_pred             CCcceEEEecCccccccceeeeeeeccCCCCccccceEEEEcCcccCChhhhHHH------------------------H
Confidence            3334444333232233333324456778899999999999999999999999999                        9


Q ss_pred             HHHHHhcCcccchHHhHhCCCccccccccCCCceecCceeEeeccccceeechhhhccCCCCCcceeEeecccCCccccc
Q psy15579        160 TLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHI  239 (368)
Q Consensus       160 ~LA~~Lg~~vg~sR~~~~~gw~~~~~qIGqtG~~v~P~lyia~GISGai~~~~~~~~g~~~~~~~V~I~~e~~ag~~~~~  239 (368)
                      +||+.|||+||||||++|+||+|+++|||||||+|+|+||||||||||+||    ++||+++++||+||+|+|+|+|+.+
T Consensus       216 ~LA~~LGa~VGaSRp~vd~gw~p~d~QVGqTGk~V~P~LYIA~GISGAiQH----laGm~~Sk~IVAINkD~nAPIF~~A  291 (313)
T COG2025         216 ELADVLGAAVGASRPAVDAGWMPNDRQVGQTGKTVAPKLYIALGISGAIQH----LAGMKDSKVIVAINKDPNAPIFQVA  291 (313)
T ss_pred             HHHHHhCceeeccHHHHhcCCCCccceecCCCcEecccEEEEEecccHHHH----HhhcccCcEEEEEcCCCCCCccccC
Confidence            999999999999999999999999999999999999999999999999999    9999999999999999999999999


Q ss_pred             ccccccchhhhHHHHHHhhc
Q psy15579        240 LAGASSMGKSLLPRVAALLD  259 (368)
Q Consensus       240 ~~elv~~ak~llp~LA~~l~  259 (368)
                      ||++++|.++++|.|.++++
T Consensus       292 DyGiVgDl~~ivP~Lie~l~  311 (313)
T COG2025         292 DYGIVGDLFKIVPALIEALK  311 (313)
T ss_pred             CeeeeeeHHHHHHHHHHHHh
Confidence            99999999999999998875

>PLN00022 electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information
>KOG3954|consensus Back     alignment and domain information
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional Back     alignment and domain information
>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional Back     alignment and domain information
>PF00766 ETF_alpha: Electron transfer flavoprotein FAD-binding domain; InterPro: IPR014731 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems Back     alignment and domain information
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional Back     alignment and domain information
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems Back     alignment and domain information
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>COG2025 FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion] Back     alignment and domain information
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional Back     alignment and domain information
>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional Back     alignment and domain information
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>KOG3954|consensus Back     alignment and domain information
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems Back     alignment and domain information
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>PF00766 ETF_alpha: Electron transfer flavoprotein FAD-binding domain; InterPro: IPR014731 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems Back     alignment and domain information
>PRK12342 hypothetical protein; Provisional Back     alignment and domain information
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed Back     alignment and domain information
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion] Back     alignment and domain information
>KOG3180|consensus Back     alignment and domain information
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
1efv_A315 Three-Dimensional Structure Of Human Electron Trans 2e-31
1efv_A 315 Three-Dimensional Structure Of Human Electron Trans 4e-17
1t9g_R333 Structure Of The Human Mcad:etf Complex Length = 33 2e-31
1t9g_R 333 Structure Of The Human Mcad:etf Complex Length = 33 5e-17
1efp_A307 Electron Transfer Flavoprotein (Etf) From Paracoccu 1e-24
1efp_A 307 Electron Transfer Flavoprotein (Etf) From Paracoccu 4e-05
>pdb|1EFV|A Chain A, Three-Dimensional Structure Of Human Electron Transfer Flavoprotein To 2.1 A Resolution Length = 315 Back     alignment and structure 
Iteration: 1

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/157 (49%), Positives = 99/157 (63%), Gaps = 29/157 (18%)
Query: 51  NAILTLKSKDPVKVVTVRGTSFPPAA-KGGSASVEALANAS-VEANKLSEWVGQELSKSD 108
           NA+ T+K  + VKV +VRGTSF  AA  GGSAS E  ++ S VE   +SEW+ Q+L+KSD
Sbjct: 134 NALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTSPVE---ISEWLDQKLTKSD 190
Query: 109 RPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLXXX 168
           RP+L  AK+VVSGGRGLKS +NFKLLY LAD+L AAVG    + D               
Sbjct: 191 RPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVD--------------- 235
Query: 169 XXXXXXXXXXXFVPNDMQIGQTGKIIAPQVSKISGVT 205
                      FVPNDMQ+GQTGKI+AP++    G++
Sbjct: 236 ---------AGFVPNDMQVGQTGKIVAPELYIAVGIS 263
>pdb|1EFV|A Chain A, Three-Dimensional Structure Of Human Electron Transfer Flavoprotein To 2.1 A Resolution Length = 315 Back     alignment and structure
>pdb|1T9G|R Chain R, Structure Of The Human Mcad:etf Complex Length = 333 Back     alignment and structure
>pdb|1T9G|R Chain R, Structure Of The Human Mcad:etf Complex Length = 333 Back     alignment and structure
>pdb|1EFP|A Chain A, Electron Transfer Flavoprotein (Etf) From Paracoccus Denitrificans Length = 307 Back     alignment and structure
>pdb|1EFP|A Chain A, Electron Transfer Flavoprotein (Etf) From Paracoccus Denitrificans Length = 307 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
1efp_A307 ETF, protein (electron transfer flavoprotein); ele 5e-61
1efp_A 307 ETF, protein (electron transfer flavoprotein); ele 3e-31
1efp_A307 ETF, protein (electron transfer flavoprotein); ele 3e-30
1efp_A307 ETF, protein (electron transfer flavoprotein); ele 6e-11
1efv_A315 Electron transfer flavoprotein; electron transport 7e-60
1efv_A 315 Electron transfer flavoprotein; electron transport 2e-33
1efv_A315 Electron transfer flavoprotein; electron transport 7e-32
1efv_A315 Electron transfer flavoprotein; electron transport 1e-11
1o97_D320 Electron transferring flavoprotein alpha-subunit; 1e-46
1o97_D 320 Electron transferring flavoprotein alpha-subunit; 2e-18
1o97_D320 Electron transferring flavoprotein alpha-subunit; 2e-17
1o97_D320 Electron transferring flavoprotein alpha-subunit; 6e-05
3ih5_A217 Electron transfer flavoprotein alpha-subunit; alph 3e-13
3ih5_A217 Electron transfer flavoprotein alpha-subunit; alph 9e-12
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Length = 307 Back     alignment and structure
 Score =  197 bits (504), Expect = 5e-61
 Identities = 70/147 (47%), Positives = 90/147 (61%), Gaps = 26/147 (17%)

Query: 51  NAILTLKSKDPVKVVTVRGTSFPPAAKGGSASVEALANASVEANKLSEWVGQELSKSDRP 110
           NAI  +KSKD  KV T+R  SF  A +GG+A V   A  +     LS WV  E+++SDRP
Sbjct: 130 NAIQVVKSKDAKKVFTIRTASFDAAGEGGTAPVTETA--AAADPGLSSWVADEVAESDRP 187

Query: 111 DLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVG 170
           +L SA+ VVSGGRGL S ++F ++  LADKLGAAVG                        
Sbjct: 188 ELTSARRVVSGGRGLGSKESFAIIEELADKLGAAVG------------------------ 223

Query: 171 ASRAAVDAGFVPNDMQIGQTGKIIAPQ 197
           ASRAAVD+G+ PND Q+GQTGK++AP+
Sbjct: 224 ASRAAVDSGYAPNDWQVGQTGKVVAPE 250
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Length = 307 Back     alignment and structure
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Length = 307 Back     alignment and structure
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Length = 307 Back     alignment and structure
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Length = 315 Back     alignment and structure
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Length = 315 Back     alignment and structure
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Length = 315 Back     alignment and structure
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Length = 315 Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Length = 320 Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Length = 320 Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Length = 320 Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Length = 320 Back     alignment and structure
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron} Length = 217 Back     alignment and structure
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron} Length = 217 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query368
1efv_A315 Electron transfer flavoprotein; electron transport 100.0
1efp_A307 ETF, protein (electron transfer flavoprotein); ele 100.0
1o97_D320 Electron transferring flavoprotein alpha-subunit; 100.0
3ih5_A217 Electron transfer flavoprotein alpha-subunit; alph 99.93
1efv_A 315 Electron transfer flavoprotein; electron transport 99.85
1o97_D 320 Electron transferring flavoprotein alpha-subunit; 99.85
1efp_A 307 ETF, protein (electron transfer flavoprotein); ele 99.83
3fet_A166 Electron transfer flavoprotein subunit alpha RELA 99.75
1o97_C264 Electron transferring flavoprotein beta-subunit; F 99.69
1efp_B252 ETF, protein (electron transfer flavoprotein); ele 99.62
1efv_B255 Electron transfer flavoprotein; electron transport 99.62
3ih5_A217 Electron transfer flavoprotein alpha-subunit; alph 99.54
3fet_A166 Electron transfer flavoprotein subunit alpha RELA 98.67
1o97_C264 Electron transferring flavoprotein beta-subunit; F 94.74
1efp_B252 ETF, protein (electron transfer flavoprotein); ele 90.51
1efv_B255 Electron transfer flavoprotein; electron transport 89.51
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Back     alignment and structure
Probab=100.00  E-value=9.6e-59  Score=453.34  Aligned_cols=225  Identities=50%  Similarity=0.753  Sum_probs=203.0

Q ss_pred             ccceEEEEEccCCccChHHHHHHHHHHHhCCcEEEEEeCCCcc-------------------------------------
Q psy15579          5 FESTIIIGEHADGKLSASTLSAITAAQKIGGDISVLVAGSKVA-------------------------------------   47 (368)
Q Consensus         5 ~~~i~v~~e~~~g~~~~~~~e~~~~a~~l~~~v~~~~~g~~~~-------------------------------------   47 (368)
                      ||++|||+||++|++++.++|+|++|++|+++++++++|++.+                                     
T Consensus         1 ~m~~lv~~e~~~g~l~~~~~eal~aA~~La~~V~av~~G~~~~~~~~~a~~a~GaDkv~~v~d~~l~~~~~~~~a~~La~   80 (315)
T 1efv_A            1 MQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILA   80 (315)
T ss_dssp             -CEEEEECCEETTEECTHHHHHHHHHHTTTSEEEEEEEESCCHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHH
T ss_pred             CceEEEEEEccCCCcCHHHHHHHHHHHHhcCcEEEEEECCchHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHH
Confidence            5779999999999999999999999999988999999997632                                     


Q ss_pred             -----------------------------------cc---------------cceeeEEEeCCCcEEEEEcCCCCCCCcC
Q psy15579         48 -----------------------------------DV---------------SNAILTLKSKDPVKVVTVRGTSFPPAAK   77 (368)
Q Consensus        48 -----------------------------------d~---------------g~~~~~i~~~~~p~~~tvrpg~f~~~~~   77 (368)
                                                         ||               ||.++++.+++.|+|+||||++|++.+.
T Consensus        81 li~~~~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~l~~~~~~~R~~~gG~~~~tv~~~~~p~viTVr~~~f~~~~~  160 (315)
T 1efv_A           81 TQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAAT  160 (315)
T ss_dssp             HHHHHCCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECEEEETTEEEEEETTTTEEEEEEECCSSEEEEECGGGSCCCCS
T ss_pred             HHHhcCCCEEEEcCCCCcchHHHHHHHHhCCCccccEEEeccCCEEEEEcCCCEEEEEEEeCCCCeEEEEcCCCCCCCCC
Confidence                                               11               9999999999888899999999997664


Q ss_pred             -CCCceEEEeeccccccCCceEEEeeeecCCCCCCCCCCCEEEEeCcccccccchhhhhhhhhhhhhccccCcccccchh
Q psy15579         78 -GGSASVEALANASVEANKLSEWVGQELSKSDRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFK  156 (368)
Q Consensus        78 -~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~vV~~GrG~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~~~  156 (368)
                       +++++++.++...  ....++++....++++++||++|++|||||||++++|||+++                      
T Consensus       161 ~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~L~~A~ivVsgGrG~~~~e~f~~~----------------------  216 (315)
T 1efv_A          161 SGGSASSEKASSTS--PVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLL----------------------  216 (315)
T ss_dssp             SSCCCEEEECCCCC--CCCSEEEEEEEECCCCSCCGGGCSEEEEECGGGCSTGGGHHH----------------------
T ss_pred             CCCCcceEEeccCC--CccceEEEEEEecccCCcCcCCCCEEEEcCCcCCChHHHHHH----------------------
Confidence             6678888776531  223466555554557889999999999999999999999999                      


Q ss_pred             hHHHHHHHhcCcccchHHhHhCCCccccccccCCCceecCceeEeeccccceeechhhhccCCCCCcceeEeecccCCcc
Q psy15579        157 LLYTLADKLGAAVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKY  236 (368)
Q Consensus       157 ~~~~LA~~Lg~~vg~sR~~~~~gw~~~~~qIGqtG~~v~P~lyia~GISGai~~~~~~~~g~~~~~~~V~I~~e~~ag~~  236 (368)
                        ++||++|||++|||||++|+||+|+++|||||||+|+|+||||||||||+||    ++||.++++||+||+|+++|+|
T Consensus       217 --~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQH----laGm~~s~~IVAIN~D~~ApIf  290 (315)
T 1efv_A          217 --YDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQH----LAGMKDSKTIVAINKDPEAPIF  290 (315)
T ss_dssp             --HHHHHHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCCCSEEEEESCCCCHHH----HTTTTTCSEEEEEESCTTCGGG
T ss_pred             --HHHHHHhCCceeecHHHHhCCCCCHHheeccCCcccCcceEEEecccCcHHH----HhhcccCCEEEEEeCCCCCCcc
Confidence              9999999999999999999999999999999999999999999999999999    9999999999999999999999


Q ss_pred             cccccccccchhhhHHHHHHhhc
Q psy15579        237 THILAGASSMGKSLLPRVAALLD  259 (368)
Q Consensus       237 ~~~~~elv~~ak~llp~LA~~l~  259 (368)
                      +.+||+++++.++++|.|.+++.
T Consensus       291 ~~ADygiVgDl~~v~P~L~~~l~  313 (315)
T 1efv_A          291 QVADYGIVADLFKVVPEMTEILK  313 (315)
T ss_dssp             GTCSEEEESCHHHHHHHHHHHTC
T ss_pred             hhcCeEEeeeHHHHHHHHHHHHh
Confidence            99999999999999999998875
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Back     alignment and structure
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Back     alignment and structure
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Back     alignment and structure
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Back     alignment and structure
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum} Back     alignment and structure
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C* Back     alignment and structure
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 Back     alignment and structure
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S* Back     alignment and structure
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum} Back     alignment and structure
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C* Back     alignment and structure
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 Back     alignment and structure
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 368
d1efva2124 c.31.1.2 (A:208-331) C-terminal domain of the elec 5e-19
d3clsd2123 c.31.1.2 (D:196-318) C-terminal domain of the elec 3e-15
d1efva1188 c.26.2.3 (A:20-207) Large, alpha subunit of electr 4e-11
d1efva1188 c.26.2.3 (A:20-207) Large, alpha subunit of electr 6e-11
d1efva1188 c.26.2.3 (A:20-207) Large, alpha subunit of electr 1e-10
d1efva1188 c.26.2.3 (A:20-207) Large, alpha subunit of electr 7e-09
d1efpa1183 c.26.2.3 (A:2-184) Large, alpha subunit of electro 1e-09
d1efpa1183 c.26.2.3 (A:2-184) Large, alpha subunit of electro 2e-09
d1efpa1183 c.26.2.3 (A:2-184) Large, alpha subunit of electro 2e-09
d1efpa1183 c.26.2.3 (A:2-184) Large, alpha subunit of electro 2e-08
d3clsd1192 c.26.2.3 (D:1-192) Large, alpha subunit of electro 4e-05
d3clsd1192 c.26.2.3 (D:1-192) Large, alpha subunit of electro 1e-04
d3clsd1192 c.26.2.3 (D:1-192) Large, alpha subunit of electro 1e-04
d3clsd1192 c.26.2.3 (D:1-192) Large, alpha subunit of electro 5e-04
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 124 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: C-terminal domain of the electron transfer flavoprotein alpha subunit
domain: C-terminal domain of the electron transfer flavoprotein alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (197), Expect = 5e-19
 Identities = 55/97 (56%), Positives = 64/97 (65%), Gaps = 24/97 (24%)

Query: 108 DRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGA 167
           DRP+L  AK+VVSGGRGLKS                         +NFKLLY LAD+L A
Sbjct: 1   DRPELTGAKVVVSGGRGLKS------------------------GENFKLLYDLADQLHA 36

Query: 168 AVGASRAAVDAGFVPNDMQIGQTGKIIAPQVSKISGV 204
           AVGASRAAVDAGFVPNDMQ+GQTGKI+AP++    G+
Sbjct: 37  AVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGI 73
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]} Length = 123 Back     information, alignment and structure
>d1efva1 c.26.2.3 (A:20-207) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 188 Back     information, alignment and structure
>d1efva1 c.26.2.3 (A:20-207) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 188 Back     information, alignment and structure
>d1efva1 c.26.2.3 (A:20-207) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 188 Back     information, alignment and structure
>d1efva1 c.26.2.3 (A:20-207) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 188 Back     information, alignment and structure
>d1efpa1 c.26.2.3 (A:2-184) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 183 Back     information, alignment and structure
>d1efpa1 c.26.2.3 (A:2-184) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 183 Back     information, alignment and structure
>d1efpa1 c.26.2.3 (A:2-184) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 183 Back     information, alignment and structure
>d1efpa1 c.26.2.3 (A:2-184) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Length = 183 Back     information, alignment and structure
>d3clsd1 c.26.2.3 (D:1-192) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Methylophilus methylotrophus [TaxId: 17]} Length = 192 Back     information, alignment and structure
>d3clsd1 c.26.2.3 (D:1-192) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Methylophilus methylotrophus [TaxId: 17]} Length = 192 Back     information, alignment and structure
>d3clsd1 c.26.2.3 (D:1-192) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Methylophilus methylotrophus [TaxId: 17]} Length = 192 Back     information, alignment and structure
>d3clsd1 c.26.2.3 (D:1-192) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Methylophilus methylotrophus [TaxId: 17]} Length = 192 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query368
d1efva2124 C-terminal domain of the electron transfer flavopr 100.0
d3clsd2123 C-terminal domain of the electron transfer flavopr 100.0
d1efva1188 Large, alpha subunit of electron transfer flavopro 99.92
d3clsd1192 Large, alpha subunit of electron transfer flavopro 99.92
d1efpa1183 Large, alpha subunit of electron transfer flavopro 99.88
d1efva1188 Large, alpha subunit of electron transfer flavopro 99.58
d3clsd1192 Large, alpha subunit of electron transfer flavopro 99.45
d1efpa1183 Large, alpha subunit of electron transfer flavopro 99.43
d1efva2124 C-terminal domain of the electron transfer flavopr 98.22
d3clsd2123 C-terminal domain of the electron transfer flavopr 98.11
d3clsc1262 Small, beta subunit of electron transfer flavoprot 97.84
d1efpb_246 Small, beta subunit of electron transfer flavoprot 97.55
d1efvb_252 Small, beta subunit of electron transfer flavoprot 97.18
d1ozha1179 Catabolic acetolactate synthase {Klebsiella pneumo 94.29
d1t9ba1171 Acetohydroxyacid synthase catalytic subunit {Baker 93.19
d2ez9a1183 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 92.02
d1q6za1160 Benzoylformate decarboxylase {Pseudomonas putida [ 90.09
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 89.04
d2djia1177 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 87.64
d2ji7a1175 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 86.31
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: C-terminal domain of the electron transfer flavoprotein alpha subunit
domain: C-terminal domain of the electron transfer flavoprotein alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-44  Score=303.98  Aligned_cols=123  Identities=50%  Similarity=0.737  Sum_probs=120.4

Q ss_pred             CCCCCCCCCEEEEeCcccccccchhhhhhhhhhhhhccccCcccccchhhHHHHHHHhcCcccchHHhHhCCCccccccc
Q psy15579        108 DRPDLGSAKIVVSGGRGLKSADNFKLLYTLADKLGAAVGRGLKSADNFKLLYTLADKLGAAVGASRAAVDAGFVPNDMQI  187 (368)
Q Consensus       108 ~~~~l~~A~~vV~~GrG~~~~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~LA~~Lg~~vg~sR~~~~~gw~~~~~qI  187 (368)
                      +++||++|++||++|||++++|||+++                        ++||++|||++|||||++|.||+|+++||
T Consensus         1 ~r~dl~~A~ivV~~GrG~~~~e~~~~~------------------------~~lA~~lga~vg~SR~~vd~gw~~~~~qI   56 (124)
T d1efva2           1 DRPELTGAKVVVSGGRGLKSGENFKLL------------------------YDLADQLHAAVGASRAAVDAGFVPNDMQV   56 (124)
T ss_dssp             CSCCGGGCSEEEEECGGGCSTGGGHHH------------------------HHHHHHHTCEEEECHHHHHTTSSCGGGBB
T ss_pred             CCCCccCCCEEEECCCCcCCHHHHHHH------------------------HHHHHHhCCeeeEeehhhhCCCcccceee
Confidence            468999999999999999999999999                        99999999999999999999999999999


Q ss_pred             cCCCceecCceeEeeccccceeechhhhccCCCCCcceeEeecccCCcccccccccccchhhhHHHHHHhh
Q psy15579        188 GQTGKIIAPQVSKISGVTKVLTVENDALKGLLPENLAPLIVSAQNAGKYTHILAGASSMGKSLLPRVAALL  258 (368)
Q Consensus       188 GqtG~~v~P~lyia~GISGai~~~~~~~~g~~~~~~~V~I~~e~~ag~~~~~~~elv~~ak~llp~LA~~l  258 (368)
                      ||||++|+|+||||||||||+||    ++|+.+++++|+||.|+++++|+.++|+++++.++++|.|.+++
T Consensus        57 G~SG~~V~P~lyia~GISGa~QH----~~Gi~~s~~IvAIN~D~~ApIf~~aD~giVgD~~evlp~L~e~l  123 (124)
T d1efva2          57 GQTGKIVAPELYIAVGISGAIQH----LAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL  123 (124)
T ss_dssp             STTSBCCCCSEEEEESCCCCHHH----HTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHT
T ss_pred             cccceEeCCcEEEEecchhHHHH----HhhccCCCEEEEEeCCCCCCccccCCEEEeccHHHHHHHHHHHh
Confidence            99999999999999999999999    99999999999999999999999999999999999999998865
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1efva1 c.26.2.3 (A:20-207) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3clsd1 c.26.2.3 (D:1-192) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1efpa1 c.26.2.3 (A:2-184) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1efva1 c.26.2.3 (A:20-207) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3clsd1 c.26.2.3 (D:1-192) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1efpa1 c.26.2.3 (A:2-184) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d3clsc1 c.26.2.3 (C:1-262) Small, beta subunit of electron transfer flavoprotein ETFP {Methylophilus methylotrophus [TaxId: 17]} Back     information, alignment and structure
>d1efpb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1efvb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure