Psyllid ID: psy15597

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200----
Protein Sequence
MHQMQEKLFIQHTSSQHIDGDKSAEAMHDMAFQQNQLIHQLEMTQRKYVLQHAIGLQSQASTSRPGQPMMMPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFGINGLLVSMGISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQALKI
Secondary Structure (PSIPRED)
cHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHcccccccccHHHcHHHHHHHHHHHHHHHHcccccHEcccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEccccccHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MHQMQEKLFIQhtssqhidgdksAEAMHDMAFQQNQLIHQLEMTQRKYVLQHAIGlqsqastsrpgqpmmmpsgvnqsdinslwnnfsmenqdvsipagdksmfgINGLLVSMGIsrrewmngddqkanESYAEKVHFLFghgvckwpgceavCEDVQAFYKHLNkehnlddrSTAQARVQMQVVSQLELQLQKERDRLQALKI
Flexible Loop (DISEMBL)
MHQMQEKLFIQHTSSQHIDGDKSAEAMHDMAFQQNQLIHQLEMTQRKYVLQHAIGLQSQASTSRPGQPMMMPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFGINGLLVSMGISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQALKI
Low Complexity Region (SEG)
MHQMQEKLFIQHTSSQHIDGDKSAEAMHDMAFQQNQLIHQLEMTQRKYVLQHAIGLQSQASTSRPGQPMMMPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFGINGLLVSMGISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQALKI
Disordered region (IsUnstruct)
***********************************QLIHQLEMTQRKYVLQHAIG***************************LWNNF********IPAGDKSMFGINGLLVSMGISRREWMNG*****NESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNK**************************************
Disordered Region (DISOPRED)
******************************************************************************************************************************************LFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQALK*
Disordered Region (DISEMBL)
MHQMQEKLFIQHTSSQHIDGDKSAEAMHDMAFQQNQLIHQLEMTQRKYVLQHAIGL*********GQPMMMPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFGINGLLVSMGISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQALKI
Disordered Region (DISPRO)
*HQ*QEKLFIQHTSSQHIDGDKSAEAMHDMAFQQNQLIHQLEMTQRKYVLQHAIGLQSQASTSRPGQPMMMPSGVNQSDINSLWNNFS**********************************************KVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQA***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHQMQEKLFIQHTSSQHIDGDKSAEAMHDMAFQQNQLIHQLEMTQRKYVLQHAIGLQSQASTSRPGQPMMMPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFGINGLLVSMGISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQALKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	204	2.2.26 [Sep-21-2011]
Q58NQ4	686	Forkhead box protein P1 O	yes	N/A	0.656	0.195	0.431	2e-27
Q9H334	677	Forkhead box protein P1 O	yes	N/A	0.323	0.097	0.787	4e-27
A4IFD2	674	Forkhead box protein P1 O	yes	N/A	0.323	0.097	0.787	4e-27
Q498D1	711	Forkhead box protein P1 O	yes	N/A	0.691	0.198	0.412	2e-26
P58462	705	Forkhead box protein P1 O	yes	N/A	0.323	0.093	0.772	2e-26
Q2LE08	659	Forkhead box protein P1-B	yes	N/A	0.441	0.136	0.597	3e-26
P58463	714	Forkhead box protein P2 O	no	N/A	0.323	0.092	0.757	4e-26
P0CF24	710	Forkhead box protein P2 O	no	N/A	0.323	0.092	0.757	4e-26
Q8MJ98	713	Forkhead box protein P2 O	N/A	N/A	0.323	0.092	0.757	4e-26
O15409	715	Forkhead box protein P2 O	no	N/A	0.323	0.092	0.757	4e-26

>sp|Q58NQ4|FOXP1_CHICK Forkhead box protein P1 OS=Gallus gallus GN=FOXP1 PE=2 SV=1

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 33/167 (19%)

Query: 62  TSRPGQPMM----MPSGVNQSDINSLW--------------NNFS---MENQDVSIPAGD 100
           T +PGQP +    +  G+  +++  LW              NN S   +    VS  A  
Sbjct: 215 TIQPGQPTLPLQPLAQGMIPTELQQLWKEVTSSHTAEEAASNNHSSLDLSTTCVSSSAPS 274

Query: 101 KSMFGINGLLVSMG-----ISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCE 155
           K+   IN    + G       +RE ++ ++   +       H L+GHGVCKWPGCEAVCE
Sbjct: 275 KTSLIINPHASTNGQLSVHTPKRESLSHEEHSHS-------HPLYGHGVCKWPGCEAVCE 327

Query: 156 DVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
           D Q+F KHLN EH LDDRSTAQ RVQMQVV QLELQL K+++RLQA+
Sbjct: 328 DFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAM 374

Transcriptional repressor.
Gallus gallus (taxid: 9031)

>sp|Q9H334|FOXP1_HUMAN Forkhead box protein P1 OS=Homo sapiens GN=FOXP1 PE=1 SV=1

 Score =  121 bits (303), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 52/66 (78%), Positives = 58/66 (87%)

Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
           H L+GHGVCKWPGCEAVCED Q+F KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 300 HPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 359

Query: 197 DRLQAL 202
           +RLQA+
Sbjct: 360 ERLQAM 365

Transcriptional repressor. It plays an important role in the specification and differentiation of lung epithelium. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Essential transcriptional regulator of B-cell development.

Homo sapiens (taxid: 9606)

>sp|A4IFD2|FOXP1_BOVIN Forkhead box protein P1 OS=Bos taurus GN=FOXP1 PE=2 SV=1

 Score =  121 bits (303), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 52/66 (78%), Positives = 58/66 (87%)

Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
           H L+GHGVCKWPGCEAVCED Q+F KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 298 HPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 357

Query: 197 DRLQAL 202
           +RLQA+
Sbjct: 358 ERLQAM 363

Transcriptional repressor that plays an important role in the specification and differentiation of lung epithelium. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Essential transcriptional regulator of B-cell development.

Bos taurus (taxid: 9913)

>sp|Q498D1|FOXP1_RAT Forkhead box protein P1 OS=Rattus norvegicus GN=Foxp1 PE=2 SV=1

 Score =  119 bits (297), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 89/160 (55%), Gaps = 19/160 (11%)

Query: 62  TSRPGQPMM----MPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFGINGLLVSMGISR 117
           T +PGQP +    +  G+  +++  LW   +  +        + S   +    VS     
Sbjct: 240 TIQPGQPALPLQPLAQGMIPTELQQLWKEVTSAHTAEETTGSNHSSLDLTSTCVSSSAPS 299

Query: 118 REWM--------NG-----DDQKANESYAEKVHF--LFGHGVCKWPGCEAVCEDVQAFYK 162
           +  +        NG       ++ + S+ E  H   L+GHGVCKWPGCEAVC+D  AF K
Sbjct: 300 KTSLIMNPHASTNGQLSVHTPKRESLSHEEHPHSHPLYGHGVCKWPGCEAVCDDFPAFLK 359

Query: 163 HLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
           HLN EH LDDRSTAQ RVQMQVV QLELQL K+++RLQA+
Sbjct: 360 HLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAM 399

Transcriptional repressor that plays an important role in the specification and differentiation of lung epithelium. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Essential transcriptional regulator of B-cell development.

Rattus norvegicus (taxid: 10116)

>sp|P58462|FOXP1_MOUSE Forkhead box protein P1 OS=Mus musculus GN=Foxp1 PE=1 SV=1

 Score =  119 bits (297), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 51/66 (77%), Positives = 57/66 (86%)

Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
           H L+GHGVCKWPGCEAVC+D  AF KHLN EH LDDRSTAQ RVQMQVV QLELQL K++
Sbjct: 328 HPLYGHGVCKWPGCEAVCDDFPAFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDK 387

Query: 197 DRLQAL 202
           +RLQA+
Sbjct: 388 ERLQAM 393

Transcriptional repressor that plays an important role in the specification and differentiation of lung epithelium. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Essential transcriptional regulator of B-cell development.

Mus musculus (taxid: 10090)

>sp|Q2LE08|FXP1B_DANRE Forkhead box protein P1-B OS=Danio rerio GN=foxp1b PE=2 SV=1

 Score =  118 bits (296), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 7/97 (7%)

Query: 106 INGLLVSMGISRREWMNGDDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLN 165
            NG  +S  + +RE    DD      ++   H L+GHGVCKWPGCEAV ED Q+F KHLN
Sbjct: 259 TNGQYISHSL-KREGSTLDD------HSPHSHPLYGHGVCKWPGCEAVFEDFQSFLKHLN 311

Query: 166 KEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
            EH LDDRSTAQ RVQMQVV QLELQL K+++RLQA+
Sbjct: 312 NEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAM 348

Transcriptional repressor.

Danio rerio (taxid: 7955)

>sp|P58463|FOXP2_MOUSE Forkhead box protein P2 OS=Mus musculus GN=Foxp2 PE=1 SV=2

 Score =  117 bits (294), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 50/66 (75%), Positives = 56/66 (84%)

Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
           H L+GHGVCKWPGCE++CED   F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 339 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 398

Query: 197 DRLQAL 202
           +RLQA+
Sbjct: 399 ERLQAM 404

Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential.

Mus musculus (taxid: 10090)

>sp|P0CF24|FOXP2_RAT Forkhead box protein P2 OS=Rattus norvegicus GN=Foxp2 PE=3 SV=1

 Score =  117 bits (294), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 50/66 (75%), Positives = 56/66 (84%)

Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
           H L+GHGVCKWPGCE++CED   F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 335 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 394

Query: 197 DRLQAL 202
           +RLQA+
Sbjct: 395 ERLQAM 400

Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential.

Rattus norvegicus (taxid: 10116)

>sp|Q8MJ98|FOXP2_PONPY Forkhead box protein P2 OS=Pongo pygmaeus GN=FOXP2 PE=2 SV=3

 Score =  117 bits (294), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 50/66 (75%), Positives = 56/66 (84%)

Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
           H L+GHGVCKWPGCE++CED   F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 338 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 397

Query: 197 DRLQAL 202
           +RLQA+
Sbjct: 398 ERLQAM 403

Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential.

Pongo pygmaeus (taxid: 9600)

>sp|O15409|FOXP2_HUMAN Forkhead box protein P2 OS=Homo sapiens GN=FOXP2 PE=1 SV=2

 Score =  117 bits (294), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 50/66 (75%), Positives = 56/66 (84%)

Query: 137 HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKER 196
           H L+GHGVCKWPGCE++CED   F KHLN EH LDDRSTAQ RVQMQVV QLE+QL KER
Sbjct: 340 HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKER 399

Query: 197 DRLQAL 202
           +RLQA+
Sbjct: 400 ERLQAM 405

Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Involved in neural mechanisms mediating the development of speech and language.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	204
307170460	606	Forkhead box protein P4 [Camponotus flor	0.725	0.244	0.527	2e-37
332019489	726	Forkhead box protein P1 [Acromyrmex echi	0.725	0.203	0.515	1e-36
322796726	707	hypothetical protein SINV_10119 [Solenop	0.725	0.209	0.515	1e-36
307212692	726	Forkhead box protein P4 [Harpegnathos sa	0.622	0.174	0.572	9e-36
345487153	910	PREDICTED: hypothetical protein LOC10011	0.622	0.139	0.568	6e-33
345487157	915	PREDICTED: hypothetical protein LOC10011	0.622	0.138	0.568	6e-33
242021971	449	Forkhead box protein P1, putative [Pedic	0.681	0.309	0.484	6e-33
340723397	736	PREDICTED: hypothetical protein LOC10065	0.460	0.127	0.683	7e-32
380017465	765	PREDICTED: uncharacterized protein LOC10	0.460	0.122	0.683	8e-32
157279729	735	FoxP protein [Apis mellifera] gi|1561512	0.460	0.127	0.673	3e-31

>gi|307170460|gb|EFN62730.1| Forkhead box protein P4 [Camponotus floridanus]

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/161 (52%), Positives = 107/161 (66%), Gaps = 13/161 (8%)

Query: 46  RKYVLQHAIGLQSQASTSRPGQPMMMPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFG 105
           R+Y+LQ  + LQ    +S       +P   N S   S  ++    +Q+ S+P   KS  G
Sbjct: 193 RQYLLQQGLSLQGHNPSSG------LPPSDNLSSWKSEPSDTPESHQNSSVP---KSNSG 243

Query: 106 INGLLVSMGISRREWMNG----DDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFY 161
           +NG+L S+  SRR  +NG    D++  + S  +KVH L+GHGVCKWPGCE +CED QAF 
Sbjct: 244 LNGILNSIASSRRSEVNGTTPMDEKPLDASCNDKVHPLYGHGVCKWPGCEVICEDYQAFL 303

Query: 162 KHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
           KHLN EH LDDRSTAQARVQMQVVSQLE+QLQKERDRL A+
Sbjct: 304 KHLNTEHTLDDRSTAQARVQMQVVSQLEIQLQKERDRLGAM 344

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019489|gb|EGI59968.1| Forkhead box protein P1 [Acromyrmex echinatior]

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/161 (51%), Positives = 106/161 (65%), Gaps = 13/161 (8%)

Query: 46  RKYVLQHAIGLQSQASTSRPGQPMMMPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFG 105
           R+Y+LQ  + LQ    +S       +P G N     S  ++    +Q+ ++    KS  G
Sbjct: 195 RQYLLQQGLSLQGHNPSSG------LPPGDNLPSWKSEPSDTPESHQNSNV---AKSNSG 245

Query: 106 INGLLVSMGISRREWMNG----DDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFY 161
           +NG+L S+  SRR  +NG    D++  + S  +KVH L+GHGVCKWPGCE +CED QAF 
Sbjct: 246 LNGILNSIASSRRSEVNGTTPMDEKPLDASCNDKVHPLYGHGVCKWPGCEVICEDYQAFL 305

Query: 162 KHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
           KHLN EH LDDRSTAQARVQMQVVSQLE+QLQKERDRL A+
Sbjct: 306 KHLNTEHTLDDRSTAQARVQMQVVSQLEIQLQKERDRLGAM 346

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322796726|gb|EFZ19159.1| hypothetical protein SINV_10119 [Solenopsis invicta]

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/161 (51%), Positives = 106/161 (65%), Gaps = 13/161 (8%)

Query: 46  RKYVLQHAIGLQSQASTSRPGQPMMMPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFG 105
           R+Y+LQ  + LQ    +S       +P   N     S  ++    +Q+ ++P   KS  G
Sbjct: 293 RQYLLQQGLSLQGHNPSS------GLPPSDNLPSWKSEPSDTPESHQNSNVP---KSNSG 343

Query: 106 INGLLVSMGISRREWMNG----DDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFY 161
           +NG+L S+  SRR  +NG    D++  + S  +KVH L+GHGVCKWPGCE +CED QAF 
Sbjct: 344 LNGILNSIASSRRSEVNGTTPMDEKPLDASCNDKVHPLYGHGVCKWPGCEVICEDYQAFL 403

Query: 162 KHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
           KHLN EH LDDRSTAQARVQMQVVSQLE+QLQKERDRL A+
Sbjct: 404 KHLNTEHTLDDRSTAQARVQMQVVSQLEIQLQKERDRLGAM 444

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212692|gb|EFN88383.1| Forkhead box protein P4 [Harpegnathos saltator]

 Score =  155 bits (392), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 79/138 (57%), Positives = 95/138 (68%), Gaps = 11/138 (7%)

Query: 73  SGVNQSDINSLWNNFSMENQDV----SIPAGDKSMFGINGLLVSMGISRREWMNG----D 124
           SG+   D    W +   + QD     ++P   KS  G+NGLL S+  SRR  +NG    D
Sbjct: 211 SGLPPGDNLPTWKSEPSDTQDSHQNSNVP---KSNSGLNGLLNSIASSRRSEVNGTTPLD 267

Query: 125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
           ++  + S  +KVH L+GHGVCKWPGCE +CED QAF KHLN EH LDDRSTAQARVQMQV
Sbjct: 268 EKPLDASCNDKVHPLYGHGVCKWPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARVQMQV 327

Query: 185 VSQLELQLQKERDRLQAL 202
           VSQLE+QLQKERDRL A+
Sbjct: 328 VSQLEIQLQKERDRLGAM 345

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487153|ref|XP_001600027.2| PREDICTED: hypothetical protein LOC100115252 isoform 1 [Nasonia vitripennis]

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/139 (56%), Positives = 95/139 (68%), Gaps = 12/139 (8%)

Query: 73  SGVNQSDINSLWNNFSMENQDVSIPAGD----KSMFGINGLLVSMGISRREWMNG----D 124
           SG+  ++    W N   E  D S   G+    KS  G+NGLL S+  +RR  +NG    D
Sbjct: 365 SGLQPAEALPAWKN---EPSDGSESHGNSNVSKSSSGLNGLLNSLVSNRRSEINGTTQLD 421

Query: 125 DQKANESYAEKV-HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQ 183
           ++  + S  EK+ H L+GHGVCKWPGCE VC+D QAF KHLN EH LDDRSTAQARVQMQ
Sbjct: 422 EKPLDASCNEKLQHPLYGHGVCKWPGCETVCDDYQAFLKHLNTEHTLDDRSTAQARVQMQ 481

Query: 184 VVSQLELQLQKERDRLQAL 202
           VVSQLE+QLQKERDRL A+
Sbjct: 482 VVSQLEIQLQKERDRLNAM 500

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487157|ref|XP_003425636.1| PREDICTED: hypothetical protein LOC100115252 isoform 3 [Nasonia vitripennis]

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/139 (56%), Positives = 95/139 (68%), Gaps = 12/139 (8%)

Query: 73  SGVNQSDINSLWNNFSMENQDVSIPAGD----KSMFGINGLLVSMGISRREWMNG----D 124
           SG+  ++    W N   E  D S   G+    KS  G+NGLL S+  +RR  +NG    D
Sbjct: 370 SGLQPAEALPAWKN---EPSDGSESHGNSNVSKSSSGLNGLLNSLVSNRRSEINGTTQLD 426

Query: 125 DQKANESYAEKV-HFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQ 183
           ++  + S  EK+ H L+GHGVCKWPGCE VC+D QAF KHLN EH LDDRSTAQARVQMQ
Sbjct: 427 EKPLDASCNEKLQHPLYGHGVCKWPGCETVCDDYQAFLKHLNTEHTLDDRSTAQARVQMQ 486

Query: 184 VVSQLELQLQKERDRLQAL 202
           VVSQLE+QLQKERDRL A+
Sbjct: 487 VVSQLEIQLQKERDRLNAM 505

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242021971|ref|XP_002431416.1| Forkhead box protein P1, putative [Pediculus humanus corporis] gi|212516692|gb|EEB18678.1| Forkhead box protein P1, putative [Pediculus humanus corporis]

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/163 (48%), Positives = 100/163 (61%), Gaps = 24/163 (14%)

Query: 43  MTQRKYVLQHAIGLQSQASTSRPGQPMMMPSGVNQSDINSLWNNFSMENQDVSIPAGDKS 102
            TQRKY+LQ                      G+N  +I S W     EN D + P   K+
Sbjct: 200 FTQRKYLLQ---------------------RGLNPGEIPSPWKEHPRENIDGNHPLNYKN 238

Query: 103 MFGINGLLVSMGISRREWMNGDD---QKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQA 159
             G NG+L  +   R + +NG     ++  E +AEK++ L+GHGVCKWPGCE+  +D QA
Sbjct: 239 FHGPNGILNPLDFIRWDGLNGLSSLPEEFLEEFAEKLNPLYGHGVCKWPGCESDFDDFQA 298

Query: 160 FYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
           F KHLN +HNLDDR+TAQARVQMQVVSQLE+QLQKERDRL A+
Sbjct: 299 FNKHLNSDHNLDDRATAQARVQMQVVSQLEIQLQKERDRLHAM 341

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723397|ref|XP_003400076.1| PREDICTED: hypothetical protein LOC100651096 [Bombus terrestris] gi|350405998|ref|XP_003487622.1| PREDICTED: hypothetical protein LOC100746295 [Bombus impatiens]

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 78/101 (77%), Gaps = 7/101 (6%)

Query: 106 INGLLVSMGISRREWMNG----DDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFY 161
           + GL VS   SRR  MNG    D++  + S  +KVH L+GHGVCKWPGCE +CED QAF 
Sbjct: 243 VAGLNVS---SRRSEMNGTTPLDEKPLDVSSNDKVHPLYGHGVCKWPGCEVICEDYQAFL 299

Query: 162 KHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
           KHLN EH LDDRSTAQARVQMQVVSQLE+QLQKERDRL A+
Sbjct: 300 KHLNTEHTLDDRSTAQARVQMQVVSQLEIQLQKERDRLTAM 340

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017465|ref|XP_003692676.1| PREDICTED: uncharacterized protein LOC100871453 [Apis florea]

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 78/101 (77%), Gaps = 7/101 (6%)

Query: 106 INGLLVSMGISRREWMNG----DDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFY 161
           + GL VS   SRR  MNG    D++  + S  +KVH L+GHGVCKWPGCE +CED QAF 
Sbjct: 373 VAGLNVS---SRRSDMNGTTPLDEKPLDVSSNDKVHPLYGHGVCKWPGCEVICEDYQAFL 429

Query: 162 KHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
           KHLN EH LDDRSTAQARVQMQVVSQLE+QLQKERDRL A+
Sbjct: 430 KHLNTEHTLDDRSTAQARVQMQVVSQLEIQLQKERDRLTAM 470

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157279729|ref|NP_001098419.1| FoxP protein [Apis mellifera] gi|156151280|dbj|BAF75928.1| FoxP protein [Apis mellifera]

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 78/101 (77%), Gaps = 7/101 (6%)

Query: 106 INGLLVSMGISRREWMNG----DDQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFY 161
           + GL VS   SRR  MNG    D++  + S  +KVH L+GHGVCKWPGCE +CED QAF 
Sbjct: 243 VAGLNVS---SRRSDMNGTTPLDEKPLDVSSNDKVHPLYGHGVCKWPGCEVICEDYQAFL 299

Query: 162 KHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQAL 202
           KHLN EH LDDRSTAQARV+MQVVSQLE+QLQKERDRL A+
Sbjct: 300 KHLNTEHTLDDRSTAQARVRMQVVSQLEIQLQKERDRLTAM 340

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	204
ZFIN|ZDB-GENE-041203-2	697	foxp2 "forkhead box P2" [Danio	0.602	0.176	0.503	3.8e-31
UNIPROTKB|Q6S511	709	FoxP2 "Forkhead box P2" [Melop	0.377	0.108	0.679	3.9e-30
UNIPROTKB|F1NQN9	629	FOXP2 "Uncharacterized protein	0.377	0.122	0.679	5.8e-30
UNIPROTKB|F1NY57	626	FOXP2 "Uncharacterized protein	0.377	0.123	0.679	9.2e-30
UNIPROTKB|Q8MJ99	713	FOXP2 "Forkhead box protein P2	0.377	0.107	0.666	1.3e-29
UNIPROTKB|Q8MJ97	714	FOXP2 "Forkhead box protein P2	0.377	0.107	0.666	1.3e-29
UNIPROTKB|Q8HZ00	716	FOXP2 "Forkhead box protein P2	0.377	0.107	0.666	1.4e-29
UNIPROTKB|Q8MJA0	716	FOXP2 "Forkhead box protein P2	0.377	0.107	0.666	1.4e-29
UNIPROTKB|F1SJC3	625	FOXP2 "Uncharacterized protein	0.377	0.123	0.666	2.4e-29
UNIPROTKB|F1NQN8	628	FOXP2 "Uncharacterized protein	0.377	0.122	0.679	2.4e-29

ZFIN|ZDB-GENE-041203-2 foxp2 "forkhead box P2" [Danio rerio (taxid:7955)]

 Score = 291 (107.5 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 67/133 (50%), Positives = 82/133 (61%)

Query:    70 MMPSGVNQSDINSLWNNFSMENQDVSIPAGDKSMFGINGLLVSMGISRREWMNGDDQKAN 129
             M  SG++ S  N+  +  S  N   S P    SM   NG   ++  +RRE         +
Sbjct:   246 MKHSGLDLSTNNNT-STTSTSNPKASPPITHHSMS--NGQSPALNNNRRE------SSLH 296

Query:   130 ESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLE 189
             E  A   H L+GHGVCKWPGCE++C+D   F KHLN EH LDDRSTAQ RVQMQVV QLE
Sbjct:   297 EETAVS-HSLYGHGVCKWPGCESICDDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLE 355

Query:   190 LQLQKERDRLQAL 202
             +QL KER+RLQA+
Sbjct:   356 IQLSKERERLQAM 368

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IBA

GO:0005667 "transcription factor complex" evidence=IBA

GO:0008301 "DNA binding, bending" evidence=IBA

GO:0008134 "transcription factor binding" evidence=IBA

GO:0007389 "pattern specification process" evidence=IBA

GO:0021549 "cerebellum development" evidence=IBA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IBA

GO:0043010 "camera-type eye development" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0048286 "lung alveolus development" evidence=IBA

GO:0021758 "putamen development" evidence=IBA

GO:0021757 "caudate nucleus development" evidence=IBA

GO:0060013 "righting reflex" evidence=IBA

GO:0050679 "positive regulation of epithelial cell proliferation" evidence=IBA

GO:0002053 "positive regulation of mesenchymal cell proliferation" evidence=IBA

GO:0042803 "protein homodimerization activity" evidence=IBA

GO:0042297 "vocal learning" evidence=IBA

GO:0048745 "smooth muscle tissue development" evidence=IBA

GO:0051090 "regulation of sequence-specific DNA binding transcription factor activity" evidence=IBA

GO:0009791 "post-embryonic development" evidence=IBA

GO:0009790 "embryo development" evidence=IBA

GO:0021987 "cerebral cortex development" evidence=IBA

GO:0007519 "skeletal muscle tissue development" evidence=IBA

GO:0046982 "protein heterodimerization activity" evidence=IBA

GO:0003690 "double-stranded DNA binding" evidence=IBA

GO:0040007 "growth" evidence=IBA

GO:0003682 "chromatin binding" evidence=IBA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q6S511 FoxP2 "Forkhead box P2" [Melopsittacus undulatus (taxid:13146)]

 Score = 283 (104.7 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
 Identities = 53/78 (67%), Positives = 60/78 (76%)

Query:   125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
             D  ++E      H L+GHGVCKWPGCE+VCED   F KHLN EH LDDRSTAQ RVQMQV
Sbjct:   323 DSSSHEETGAS-HTLYGHGVCKWPGCESVCEDFGQFLKHLNNEHALDDRSTAQCRVQMQV 381

Query:   185 VSQLELQLQKERDRLQAL 202
             V QLE+QL KER+RLQA+
Sbjct:   382 VQQLEIQLSKERERLQAM 399

GO:0003677 "DNA binding" evidence=ISS

GO:0021757 "caudate nucleus development" evidence=ISS

GO:0021758 "putamen development" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

UNIPROTKB|F1NQN9 FOXP2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 283 (104.7 bits), Expect = 5.8e-30, Sum P(2) = 5.8e-30
 Identities = 53/78 (67%), Positives = 60/78 (76%)

Query:   125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
             D  ++E      H L+GHGVCKWPGCE+VCED   F KHLN EH LDDRSTAQ RVQMQV
Sbjct:   243 DSSSHEETGAS-HTLYGHGVCKWPGCESVCEDFGQFLKHLNNEHALDDRSTAQCRVQMQV 301

Query:   185 VSQLELQLQKERDRLQAL 202
             V QLE+QL KER+RLQA+
Sbjct:   302 VQQLEIQLSKERERLQAM 319

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0002053 "positive regulation of mesenchymal cell proliferation" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0007519 "skeletal muscle tissue development" evidence=IEA

GO:0009790 "embryo development" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0021549 "cerebellum development" evidence=IEA

GO:0021757 "caudate nucleus development" evidence=IEA

GO:0021758 "putamen development" evidence=IEA

GO:0021987 "cerebral cortex development" evidence=IEA

GO:0040007 "growth" evidence=IEA

GO:0042297 "vocal learning" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0043010 "camera-type eye development" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0060013 "righting reflex" evidence=IEA

GO:0060501 "positive regulation of epithelial cell proliferation involved in lung morphogenesis" evidence=IEA

UNIPROTKB|F1NY57 FOXP2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 283 (104.7 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
 Identities = 53/78 (67%), Positives = 60/78 (76%)

Query:   125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
             D  ++E      H L+GHGVCKWPGCE+VCED   F KHLN EH LDDRSTAQ RVQMQV
Sbjct:   240 DSSSHEETGAS-HTLYGHGVCKWPGCESVCEDFGQFLKHLNNEHALDDRSTAQCRVQMQV 298

Query:   185 VSQLELQLQKERDRLQAL 202
             V QLE+QL KER+RLQA+
Sbjct:   299 VQQLEIQLSKERERLQAM 316

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

UNIPROTKB|Q8MJ99 FOXP2 "Forkhead box protein P2" [Gorilla gorilla gorilla (taxid:9595)]

 Score = 282 (104.3 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
 Identities = 52/78 (66%), Positives = 60/78 (76%)

Query:   125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
             D  ++E      H L+GHGVCKWPGCE++CED   F KHLN EH LDDRSTAQ RVQMQV
Sbjct:   327 DSSSHEETGAS-HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQV 385

Query:   185 VSQLELQLQKERDRLQAL 202
             V QLE+QL KER+RLQA+
Sbjct:   386 VQQLEIQLSKERERLQAM 403

GO:0003677 "DNA binding" evidence=ISS

GO:0021757 "caudate nucleus development" evidence=ISS

GO:0021758 "putamen development" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

UNIPROTKB|Q8MJ97 FOXP2 "Forkhead box protein P2" [Macaca mulatta (taxid:9544)]

 Score = 282 (104.3 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
 Identities = 52/78 (66%), Positives = 60/78 (76%)

Query:   125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
             D  ++E      H L+GHGVCKWPGCE++CED   F KHLN EH LDDRSTAQ RVQMQV
Sbjct:   328 DSSSHEETGAS-HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQV 386

Query:   185 VSQLELQLQKERDRLQAL 202
             V QLE+QL KER+RLQA+
Sbjct:   387 VQQLEIQLSKERERLQAM 404

GO:0002053 "positive regulation of mesenchymal cell proliferation" evidence=IBA

GO:0003677 "DNA binding" evidence=ISS

GO:0003682 "chromatin binding" evidence=IBA

GO:0003690 "double-stranded DNA binding" evidence=IBA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IBA

GO:0005667 "transcription factor complex" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0007389 "pattern specification process" evidence=IBA

GO:0007519 "skeletal muscle tissue development" evidence=IBA

GO:0008134 "transcription factor binding" evidence=IBA

GO:0008301 "DNA binding, bending" evidence=IBA

GO:0009790 "embryo development" evidence=IBA

GO:0009791 "post-embryonic development" evidence=IBA

GO:0021549 "cerebellum development" evidence=IBA

GO:0021757 "caudate nucleus development" evidence=ISS;IBA

GO:0021758 "putamen development" evidence=ISS;IBA

GO:0021987 "cerebral cortex development" evidence=IBA

GO:0040007 "growth" evidence=IBA

GO:0042297 "vocal learning" evidence=IBA

GO:0042803 "protein homodimerization activity" evidence=ISS;IBA

GO:0043010 "camera-type eye development" evidence=IBA

GO:0046982 "protein heterodimerization activity" evidence=IBA

GO:0048286 "lung alveolus development" evidence=IBA

GO:0048745 "smooth muscle tissue development" evidence=IBA

GO:0051090 "regulation of sequence-specific DNA binding transcription factor activity" evidence=IBA

GO:0060013 "righting reflex" evidence=IBA

GO:0060501 "positive regulation of epithelial cell proliferation involved in lung morphogenesis" evidence=IBA

UNIPROTKB|Q8HZ00 FOXP2 "Forkhead box protein P2" [Pan paniscus (taxid:9597)]

 Score = 282 (104.3 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 52/78 (66%), Positives = 60/78 (76%)

Query:   125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
             D  ++E      H L+GHGVCKWPGCE++CED   F KHLN EH LDDRSTAQ RVQMQV
Sbjct:   330 DSSSHEETGAS-HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQV 388

Query:   185 VSQLELQLQKERDRLQAL 202
             V QLE+QL KER+RLQA+
Sbjct:   389 VQQLEIQLSKERERLQAM 406

GO:0003677 "DNA binding" evidence=ISS

GO:0021757 "caudate nucleus development" evidence=ISS

GO:0021758 "putamen development" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

UNIPROTKB|Q8MJA0 FOXP2 "Forkhead box protein P2" [Pan troglodytes (taxid:9598)]

 Score = 282 (104.3 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 52/78 (66%), Positives = 60/78 (76%)

Query:   125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
             D  ++E      H L+GHGVCKWPGCE++CED   F KHLN EH LDDRSTAQ RVQMQV
Sbjct:   330 DSSSHEETGAS-HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQV 388

Query:   185 VSQLELQLQKERDRLQAL 202
             V QLE+QL KER+RLQA+
Sbjct:   389 VQQLEIQLSKERERLQAM 406

GO:0002053 "positive regulation of mesenchymal cell proliferation" evidence=IBA

GO:0003677 "DNA binding" evidence=ISS

GO:0003682 "chromatin binding" evidence=IBA

GO:0003690 "double-stranded DNA binding" evidence=IBA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IBA

GO:0005667 "transcription factor complex" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0007389 "pattern specification process" evidence=IBA

GO:0007519 "skeletal muscle tissue development" evidence=IBA

GO:0008134 "transcription factor binding" evidence=IBA

GO:0008301 "DNA binding, bending" evidence=IBA

GO:0009790 "embryo development" evidence=IBA

GO:0009791 "post-embryonic development" evidence=IBA

GO:0021549 "cerebellum development" evidence=IBA

GO:0021757 "caudate nucleus development" evidence=ISS;IBA

GO:0021758 "putamen development" evidence=ISS;IBA

GO:0021987 "cerebral cortex development" evidence=IBA

GO:0040007 "growth" evidence=IBA

GO:0042297 "vocal learning" evidence=IBA

GO:0042803 "protein homodimerization activity" evidence=ISS;IBA

GO:0043010 "camera-type eye development" evidence=IBA

GO:0046982 "protein heterodimerization activity" evidence=IBA

GO:0048286 "lung alveolus development" evidence=IBA

GO:0048745 "smooth muscle tissue development" evidence=IBA

GO:0051090 "regulation of sequence-specific DNA binding transcription factor activity" evidence=IBA

GO:0060013 "righting reflex" evidence=IBA

GO:0060501 "positive regulation of epithelial cell proliferation involved in lung morphogenesis" evidence=IBA

UNIPROTKB|F1SJC3 FOXP2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 282 (104.3 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
 Identities = 52/78 (66%), Positives = 60/78 (76%)

Query:   125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
             D  ++E      H L+GHGVCKWPGCE++CED   F KHLN EH LDDRSTAQ RVQMQV
Sbjct:   239 DSSSHEETGAS-HTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQV 297

Query:   185 VSQLELQLQKERDRLQAL 202
             V QLE+QL KER+RLQA+
Sbjct:   298 VQQLEIQLSKERERLQAM 315

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0021987 "cerebral cortex development" evidence=IEA

GO:0021758 "putamen development" evidence=IEA

GO:0021757 "caudate nucleus development" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1NQN8 FOXP2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 283 (104.7 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
 Identities = 53/78 (67%), Positives = 60/78 (76%)

Query:   125 DQKANESYAEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQV 184
             D  ++E      H L+GHGVCKWPGCE+VCED   F KHLN EH LDDRSTAQ RVQMQV
Sbjct:   242 DSSSHEETGAS-HTLYGHGVCKWPGCESVCEDFGQFLKHLNNEHALDDRSTAQCRVQMQV 300

Query:   185 VSQLELQLQKERDRLQAL 202
             V QLE+QL KER+RLQA+
Sbjct:   301 VQQLEIQLSKERERLQAM 318

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2LE08	FXP1B_DANRE	No assigned EC number	0.5979	0.4411	0.1365	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	204
KOG4385|consensus	581		100.0
KOG4385|consensus	581		95.61
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	85.66
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	81.32

>KOG4385|consensus

Probab=100.00  E-value=5.5e-52  Score=389.51  Aligned_cols=189  Identities=39%  Similarity=0.605  Sum_probs=149.2

Q ss_pred             cccchhhhcccccccccCcchhHHHHhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCC-CCCCC-CCC----CCCC
Q psy15597          2 HQMQEKLFIQHTSSQHIDGDKSAEAMHDMAFQQNQLIHQLEMTQRKYVLQHAIGLQSQASTS-RPGQP-MMM----PSGV   75 (204)
Q Consensus         2 EQLhLQLLqQqh~~qq~~k~~~~~a~qQLafQQQlL~QqlQ~qq~q~~~QhlL~LqRqgllS-~P~q~-~~~----~~~~   75 (204)
                      |||++++++++ +++++... ...++++|+||++++ ||++.++         .|+|+|+++ +||+. +|+    ++||
T Consensus        63 ~qls~q~~~~~-agk~a~s~-~~~~n~~l~fQ~qL~-qm~~~q~---------~l~~~~~~tiqp~e~slplq~t~q~~m  130 (581)
T KOG4385|consen   63 PQLSLQLLQQQ-AGKNAKSQ-QSLLNQQLAFQQQLL-QMQQPQQ---------QLQRQGLLTIQPGESSLPLQTTPQAGM  130 (581)
T ss_pred             cccchhhhhhc-cCcCCccc-cccccccchHHHHHH-HHhhhhh---------hhhhccccccCCCCCCCcccccCcccC
Confidence            78999999887 66664443 357889999999976 6555432         288999999 78877 433    4699


Q ss_pred             CchhHhhhhhhcccC--CCCccCCCCCCCccc-----cccccccccccCcccCCCC----ccccccccccc---cccccc
Q psy15597         76 NQSDINSLWNNFSME--NQDVSIPAGDKSMFG-----INGLLVSMGISRREWMNGD----DQKANESYAEK---VHFLFG  141 (204)
Q Consensus        76 ~paelqqlWke~~~~--~~~~~~~~~~~~~~~-----~~~~~~s~~~~~~~~~nGq----~~~r~ss~~~~---~h~L~~  141 (204)
                      +|+++++||||+..+  .++.  .+++.+.++     ....+.+...+.|.++||+    ++|||+++++.   +||||+
T Consensus       131 ~pt~~~~lw~e~~~a~psed~--~~~~l~ltt~~~~s~~ps~~s~~~nph~~~n~q~~~~~~r~ds~~~~~~~~shPl~~  208 (581)
T KOG4385|consen  131 SPTPLQGLWKEGTPAHPSEDP--KHSGLDLTTTEASSTEPSKTSKVSNPHKVENGQHSVSSPRRDSSSMEEHPSSHPLYA  208 (581)
T ss_pred             CCccHHHHhhccccCCcCCCc--cccceeeeecchhccCccccccCCCcccccccccccccccchhhhhhcccccCCccc
Confidence            999999999988432  2221  222222211     1112223333459999999    48999998874   999999


Q ss_pred             CccccCCCCCcccccHHHHHHHhhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q psy15597        142 HGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQALKI  204 (204)
Q Consensus       142 ~g~CkWPgCe~~~ed~~~flkHL~~eH~lddrstaQcrvQ~qvVqqLE~qL~~EkerL~AM~~  204 (204)
                      ||+|||||||++||||+.||||||+||+||||||||||||||||++||.+|.||||||+|||+
T Consensus       209 hgvckwpgcE~~~ed~~~flKhln~eh~lddrstaQcrvQmQVvqqlE~ql~ke~erlqamm~  271 (581)
T KOG4385|consen  209 HGVCKWPGCEAVCEDFGSFLKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLSKESERLQAMMA  271 (581)
T ss_pred             CCccCCCchhhhccchHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999995

>KOG4385|consensus

Probab=95.61  E-value=0.00097  Score=64.90  Aligned_cols=67  Identities=9%  Similarity=0.069  Sum_probs=61.8

Q ss_pred             cccccccccCccccCCCCCcccccHHHHHHHhhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy15597        133 AEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQALK  203 (204)
Q Consensus       133 ~~~~h~L~~~g~CkWPgCe~~~ed~~~flkHL~~eH~lddrstaQcrvQ~qvVqqLE~qL~~EkerL~AM~  203 (204)
                      +-+.+-||.+|+|.||+|+. |.+...|..|+.++|...+++++=-+   +.|...|..+..+|.+..+|+
T Consensus       132 pt~~~~lw~e~~~a~psed~-~~~~l~ltt~~~~s~~ps~~s~~~np---h~~~n~q~~~~~~r~ds~~~~  198 (581)
T KOG4385|consen  132 PTPLQGLWKEGTPAHPSEDP-KHSGLDLTTTEASSTEPSKTSKVSNP---HKVENGQHSVSSPRRDSSSME  198 (581)
T ss_pred             CccHHHHhhccccCCcCCCc-cccceeeeecchhccCccccccCCCc---ccccccccccccccchhhhhh
Confidence            34678899999999999999 99999999999999999999999888   788899999999999999987

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=85.66  E-value=0.58  Score=26.13  Aligned_cols=20  Identities=20%  Similarity=0.516  Sum_probs=18.3

Q ss_pred             CCCCcccccHHHHHHHhhhhc
Q psy15597        148 PGCEAVCEDVQAFYKHLNKEH  168 (204)
Q Consensus       148 PgCe~~~ed~~~flkHL~~eH  168 (204)
                      |.|++.|.+...|.+|+.. |
T Consensus         4 ~~C~~~f~~~~~l~~H~~~-H   23 (23)
T PF00096_consen    4 PICGKSFSSKSNLKRHMRR-H   23 (23)
T ss_dssp             TTTTEEESSHHHHHHHHHH-H
T ss_pred             CCCCCccCCHHHHHHHHhH-C
Confidence            5899999999999999987 5

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=81.32  E-value=1.5  Score=23.68  Aligned_cols=21  Identities=19%  Similarity=0.450  Sum_probs=18.0

Q ss_pred             CCCCcccccHHHHHHHhhhhc
Q psy15597        148 PGCEAVCEDVQAFYKHLNKEH  168 (204)
Q Consensus       148 PgCe~~~ed~~~flkHL~~eH  168 (204)
                      |-|+..|.+..++.+|+.+.|
T Consensus         4 ~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    4 PICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             SSTS-EESSHHHHHHHHHHHS
T ss_pred             cCCCCcCCcHHHHHHHHHhhC
Confidence            459999999999999999877

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	204
4i1l_A	93	Structural And Biological Features Of Foxp3 Dimeriz		7e-12

>pdb|4I1L|A Chain A, Structural And Biological Features Of Foxp3 Dimerization Relevant To Regulatory T Cell Function Length = 93

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 139 LFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDR 198
           L  +GVCKWPGCE V E+ + F KH   +H LD++  AQ  +Q +VV  LE QL+ E+++
Sbjct: 9   LLANGVCKWPGCEKVFEEPEEFLKHCQADHLLDEKGKAQCLLQREVVQSLEQQLELEKEK 68
Query: 199 LQAL 202
           L A+
Sbjct: 69  LGAM 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	204
4i1l_A	93	Scurfin, forkhead box protein P3; FOXP3, dimerizat	100.0
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.96
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.78
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	95.12
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	94.04
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	93.34
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	92.7
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	91.11
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	90.75
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.56
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	89.88
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	89.72
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	89.7
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	89.14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	88.87
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	88.69
2epa_A	72	Krueppel-like factor 10; transforming growth facto	88.36
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	87.79
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	87.5
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	87.13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	85.55
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	82.55
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	80.36
2epa_A	72	Krueppel-like factor 10; transforming growth facto	80.05

>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}

Probab=100.00  E-value=2.3e-45  Score=280.75  Aligned_cols=72  Identities=42%  Similarity=0.750  Sum_probs=56.3

Q ss_pred             cccccccccCccccCCCCCcccccHHHHHHHhhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q psy15597        133 AEKVHFLFGHGVCKWPGCEAVCEDVQAFYKHLNKEHNLDDRSTAQARVQMQVVSQLELQLQKERDRLQALKI  204 (204)
Q Consensus       133 ~~~~h~L~~~g~CkWPgCe~~~ed~~~flkHL~~eH~lddrstaQcrvQ~qvVqqLE~qL~~EkerL~AM~~  204 (204)
                      ..++||||+||+|||||||++||||++||||||+||+|||||||||||||+||++||+||.|||+||+|||+
T Consensus         3 ~~~shpL~~~g~CkWPGCe~~~ed~~~FlkHL~~eH~LddrS~AQcrvQ~qvVq~LE~QL~kEreRLqAM~~   74 (93)
T 4i1l_A            3 MDPSYPLLANGVCKWPGCEKVFEEPEEFLKHCQADHLLDEKGKAQCLLQREVVQSLEQQLELEKEKLGAMQA   74 (93)
T ss_dssp             ---------------CCSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcchhCCcccCCCCCCcccCHHHHHHHhhcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456999999999999999999999999999999999999999999999999999999999999999999984

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.96  E-value=0.00043  Score=47.61  Aligned_cols=30  Identities=30%  Similarity=0.608  Sum_probs=27.1

Q ss_pred             ccccCCCCCcccccHHHHHHHhhhhcCCCC
Q psy15597        143 GVCKWPGCEAVCEDVQAFYKHLNKEHNLDD  172 (204)
Q Consensus       143 g~CkWPgCe~~~ed~~~flkHL~~eH~ldd  172 (204)
                      -+|+|-+|++.|.+...|++|++.+|.-..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~   31 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQD   31 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcc
Confidence            379999999999999999999999997553

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.78  E-value=0.0047  Score=42.38  Aligned_cols=27  Identities=26%  Similarity=0.757  Sum_probs=25.1

Q ss_pred             CccccCCCCCcccccHHHHHHHhhhhc
Q psy15597        142 HGVCKWPGCEAVCEDVQAFYKHLNKEH  168 (204)
Q Consensus       142 ~g~CkWPgCe~~~ed~~~flkHL~~eH  168 (204)
                      .-+|.|-||...+.++..++.|++.+|
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCEeeCCCCcCCCCChHHHHhhccccC
Confidence            357999999999999999999999988

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=95.12  E-value=0.012  Score=31.15  Aligned_cols=23  Identities=22%  Similarity=0.550  Sum_probs=21.2

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.||.|++.|.+...+.+|..+
T Consensus         4 ~C~~~~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            4 VCHFENCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             EECSTTTCEEESSHHHHHHHHGG
T ss_pred             CCcCCcCcCccCCHHHHHHHHHH
Confidence            69999999999999999999864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=94.04  E-value=0.038  Score=30.15  Aligned_cols=23  Identities=17%  Similarity=0.553  Sum_probs=21.4

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.||.|++.|.....+.+|..+
T Consensus         4 ~C~~~~C~k~f~~~~~L~~H~~~   26 (31)
T 1sp2_A            4 MCTWSYCGKRFTRSDELQRHKRT   26 (31)
T ss_dssp             BCCSTTCCCBCSSHHHHHHHHTT
T ss_pred             CCcCCCCCcccCCHhHHHHHHHH
Confidence            69999999999999999999875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=93.34  E-value=0.046  Score=29.92  Aligned_cols=23  Identities=22%  Similarity=0.621  Sum_probs=21.4

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.||.|++.|.....+.+|..+
T Consensus         5 ~C~~~~C~k~f~~~~~L~~H~~~   27 (32)
T 1zfd_A            5 SCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             CCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             cCcCCCCCCccCCHHHHHHHHHH
Confidence            59999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=92.70  E-value=0.069  Score=30.40  Aligned_cols=23  Identities=26%  Similarity=0.557  Sum_probs=21.2

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.||+|++.|.....+.+|...
T Consensus         8 ~C~~~~C~k~f~~~~~L~~H~~~   30 (38)
T 1bhi_A            8 LCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             ECCCTTTCCEESSHHHHHHHHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHH
Confidence            69999999999999999999864

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=91.11  E-value=0.15  Score=37.12  Aligned_cols=30  Identities=30%  Similarity=0.778  Sum_probs=26.0

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcCCCCc
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHNLDDR  173 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~lddr  173 (204)
                      .|+|+.|++.|.+...+.+|+...|..++.
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~   32 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGER   32 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCS
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCC
Confidence            599999999999999999999987755443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=90.75  E-value=0.18  Score=36.90  Aligned_cols=27  Identities=26%  Similarity=0.347  Sum_probs=24.4

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcCC
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHNL  170 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~l  170 (204)
                      .|.||+|++.|..-..+.+|+..-|.-
T Consensus        29 kC~~~~CgKaFsr~s~L~~H~rriHTg   55 (73)
T 1x3c_A           29 RCVHQGCFAAFTIQQNLILHYQAVHKS   55 (73)
T ss_dssp             BCCSTTCCCBCSSHHHHHHHHHHHSSS
T ss_pred             ECCCCCcChhHcCHHHHHHHhhhhCCC
Confidence            699999999999999999998767763

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.56  E-value=0.2  Score=30.87  Aligned_cols=23  Identities=26%  Similarity=0.458  Sum_probs=21.5

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.||+|++.|.+...+.+|+.+
T Consensus        11 ~C~~~~C~k~F~~~~~L~~H~r~   33 (38)
T 2eln_A           11 KCPTDGCDYSTPDKYKLQAHLKV   33 (38)
T ss_dssp             ECSSSSCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCccCCHHHHHHHHHh
Confidence            79999999999999999999864

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=89.88  E-value=0.19  Score=33.95  Aligned_cols=24  Identities=29%  Similarity=0.725  Sum_probs=20.4

Q ss_pred             cccCCCCCcccccHHHHHHHhhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKE  167 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~e  167 (204)
                      .|.||+|++.|.+...+.+|+..-
T Consensus        17 ~C~~~~C~~~f~~~~~l~~H~~~h   40 (100)
T 2ebt_A           17 YCDYPGCTKVYTKSSHLKAHLRTH   40 (100)
T ss_dssp             ECCSSSCCCEESCHHHHHHHHHHH
T ss_pred             EcCCCCCCCcccCHHHHHHHHHHh
Confidence            589999999999999999998763

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=89.72  E-value=0.22  Score=32.42  Aligned_cols=26  Identities=27%  Similarity=0.641  Sum_probs=20.1

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcC
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHN  169 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~  169 (204)
                      .|.||+|++.|.+...+.+|+...|.
T Consensus         9 ~C~~~~C~~~f~~~~~L~~H~~~~H~   34 (79)
T 2dlk_A            9 PCDFPGCGRIFSNRQYLNHHKKYQHI   34 (79)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHGGG
T ss_pred             cCCCCCCcCccCCHHHHHHHHHHHhC
Confidence            58888888888888888888775554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=89.70  E-value=0.21  Score=28.50  Aligned_cols=23  Identities=26%  Similarity=0.562  Sum_probs=21.2

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.+|+|++.|.....+.+|..+
T Consensus        10 ~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A           10 ICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             ECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCccCCHHHHHHHHHh
Confidence            69999999999999999999864

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=89.14  E-value=0.31  Score=28.84  Aligned_cols=25  Identities=28%  Similarity=0.775  Sum_probs=22.5

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcC
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHN  169 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~  169 (204)
                      .|.||.|++.|.....|.+|+.. |.
T Consensus        14 ~C~~~~C~k~f~~~~~L~~H~~~-H~   38 (48)
T 2ent_A           14 ACTWPGCGWRFSRSDELSRHRRS-HS   38 (48)
T ss_dssp             ECCSSSCCCEESSHHHHHHHHTT-SC
T ss_pred             ECCCCCCCCccCCHHHHHHHHHH-hC
Confidence            69999999999999999999875 43

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=88.87  E-value=0.25  Score=32.63  Aligned_cols=23  Identities=22%  Similarity=0.602  Sum_probs=19.1

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.||+|++.|.+...+.+|+..
T Consensus         7 ~C~~~~C~~~f~~~~~l~~H~~~   29 (89)
T 2wbs_A            7 TCDYAGCGKTYTKSSHLKAHLRT   29 (89)
T ss_dssp             ECCSTTTCCEESSHHHHHHHHTT
T ss_pred             eCCCCCCCCcCCCHHHHHHHHHh
Confidence            58888888888888888888875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=88.69  E-value=0.092  Score=31.98  Aligned_cols=23  Identities=22%  Similarity=0.599  Sum_probs=21.2

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.||+|++.|.....+.+|..+
T Consensus        20 ~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A           20 ECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             ECCCTTCCCEECSSSSHHHHHHH
T ss_pred             ECCCCCCCCccCCHHHHHHHHHH
Confidence            69999999999999999999865

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=88.36  E-value=0.3  Score=31.47  Aligned_cols=23  Identities=22%  Similarity=0.544  Sum_probs=20.9

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.+|||++.|.....+.+|+..
T Consensus        19 ~C~~~~C~k~f~~~~~L~~H~~~   41 (72)
T 2epa_A           19 ICSHPGCGKTYFKSSHLKAHTRT   41 (72)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             eCCCCCCccccCCHHHHHHHHHh
Confidence            69999999999999999999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.79  E-value=0.64  Score=31.14  Aligned_cols=34  Identities=21%  Similarity=0.425  Sum_probs=27.4

Q ss_pred             ccccCccccCC----------CCCcccccHHHHHHHhhhhcCCC
Q psy15597        138 FLFGHGVCKWP----------GCEAVCEDVQAFYKHLNKEHNLD  171 (204)
Q Consensus       138 ~L~~~g~CkWP----------gCe~~~ed~~~flkHL~~eH~ld  171 (204)
                      ++-.+-.|+|.          .|++.|.....+.+|+...|.-+
T Consensus         9 ~~~~~~~c~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   52 (95)
T 2ej4_A            9 PIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGG   52 (95)
T ss_dssp             CCCCCCCCCCCCSSCSSSSCCCCCCCCSSHHHHHHHHHHTTTCC
T ss_pred             CCCCCceeEeecCCcCCCcccccccccCCHHHHHHHHHHhccCC
Confidence            44556778887          79999999999999998877643

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=87.50  E-value=0.32  Score=31.54  Aligned_cols=23  Identities=17%  Similarity=0.413  Sum_probs=18.4

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.|+.|++.|.+...+.+|+.+
T Consensus         3 ~C~~~~C~~~f~~~~~l~~H~~~   25 (85)
T 2j7j_A            3 VCHFENCGKAFKKHNQLKVHQFS   25 (85)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHHH
T ss_pred             cCCCCCCCcccCCHHHHHHHHHH
Confidence            47788888888888888888765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=87.13  E-value=0.66  Score=33.89  Aligned_cols=36  Identities=19%  Similarity=0.400  Sum_probs=28.9

Q ss_pred             ccccccCccccC----------CCCCcccccHHHHHHHhhhhcCCC
Q psy15597        136 VHFLFGHGVCKW----------PGCEAVCEDVQAFYKHLNKEHNLD  171 (204)
Q Consensus       136 ~h~L~~~g~CkW----------PgCe~~~ed~~~flkHL~~eH~ld  171 (204)
                      .-|+...-.|+|          +.|++.|.+...+.+|+...|..+
T Consensus         7 ~~~~~~~~~c~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   52 (155)
T 2rpc_A            7 GQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGG   52 (155)
T ss_dssp             SCCCCCCBCCCBCCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCC
T ss_pred             CCccCCCeeEEeechhhcccccccCCcccCCHHHHHHHHHhhcCCC
Confidence            445556667777          669999999999999999888754

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=85.55  E-value=0.47  Score=32.80  Aligned_cols=23  Identities=26%  Similarity=0.647  Sum_probs=17.9

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.||+|++.|.+...+.+|+..
T Consensus         8 ~C~~~~C~~~f~~~~~l~~H~~~   30 (119)
T 2jp9_A            8 MCAYPGCNKRYFKLSHLQMHSRK   30 (119)
T ss_dssp             CCCSTTSCCCBSCHHHHHHHHHH
T ss_pred             eCCCCCCcchhCCHHHHHHHHHh
Confidence            57888888888888888888764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=82.55  E-value=0.75  Score=32.22  Aligned_cols=23  Identities=35%  Similarity=0.693  Sum_probs=21.2

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|.|++|++.|.+...+.+|+..
T Consensus         7 ~C~~~~C~~~f~~~~~l~~H~~~   29 (124)
T 1ubd_C            7 ACPHKGCTKMFRDNSAMRKHLHT   29 (124)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGG
T ss_pred             cCCCCCCcCccCCHHHHHHHHHH
Confidence            69999999999999999999974

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=80.36  E-value=1  Score=29.03  Aligned_cols=26  Identities=27%  Similarity=0.424  Sum_probs=18.8

Q ss_pred             ccccCCC-CCcccccHHHHHHHhhhhc
Q psy15597        143 GVCKWPG-CEAVCEDVQAFYKHLNKEH  168 (204)
Q Consensus       143 g~CkWPg-Ce~~~ed~~~flkHL~~eH  168 (204)
                      -.|..|+ |++.|.....|.+|+..-|
T Consensus        59 ~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           59 YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            3577777 8888888888888876544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=80.05  E-value=0.97  Score=28.97  Aligned_cols=23  Identities=26%  Similarity=0.635  Sum_probs=21.1

Q ss_pred             ccccCCCCCcccccHHHHHHHhh
Q psy15597        143 GVCKWPGCEAVCEDVQAFYKHLN  165 (204)
Q Consensus       143 g~CkWPgCe~~~ed~~~flkHL~  165 (204)
                      -.|.|++|++.|.....+.+|+.
T Consensus        48 ~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           48 FSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             EECCCTTCCCEESSHHHHHHHTT
T ss_pred             ccCCCCCCCcccCCHHHHHhHhh
Confidence            46999999999999999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	204
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.72
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.86
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.5
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.42
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.4
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.39
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	96.19
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.01
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	94.54
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.85
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	93.72
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	90.68
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.95

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1e-05  Score=49.80  Aligned_cols=30  Identities=30%  Similarity=0.778  Sum_probs=28.1

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcCCCCc
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHNLDDR  173 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~lddr  173 (204)
                      .|.|-+|...|++-.++++|+|+||...+|
T Consensus         3 nChW~~C~~eFdtQd~LV~HinndHI~~~K   32 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHINSEHIHGER   32 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCS
T ss_pred             cccccccccccCCHHHHHHHccccccccCC
Confidence            599999999999999999999999988765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.86  E-value=0.00022  Score=43.19  Aligned_cols=23  Identities=22%  Similarity=0.621  Sum_probs=21.2

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      +|.||||++.|.....+.+|..+
T Consensus         5 ~C~~pgC~k~F~r~~~L~~H~r~   27 (32)
T d1zfda_           5 SCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             CCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             ECcCCCCCCeeCCHHHHHHHhhh
Confidence            79999999999999999999763

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00026  Score=41.92  Aligned_cols=23  Identities=22%  Similarity=0.563  Sum_probs=20.6

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      +|.||||++.|.....+-+|..+
T Consensus         4 ~C~~~gC~K~F~~~~~L~~H~r~   26 (28)
T d1ubdc4           4 VCPFDGCNKKFAQSTNLKSHILT   26 (28)
T ss_dssp             CCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             CCCCCCcCCcCCCHHHHHHHHhh
Confidence            79999999999999999998753

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00059  Score=41.99  Aligned_cols=28  Identities=25%  Similarity=0.507  Sum_probs=24.3

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcCCCCc
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHNLDDR  173 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~lddr  173 (204)
                      +|.||||++.|..-..+.+|+.+ |. ++|
T Consensus         3 ~C~~~~C~k~F~~~~~L~~H~r~-Ht-gek   30 (36)
T d2dlka2           3 SCPEPACGKSFNFKKHLKEHMKL-HS-DTR   30 (36)
T ss_dssp             ECSCTTTCCEESSHHHHHHHHHH-HH-TSC
T ss_pred             ECCCCCCCCeeCChhHhccccCe-eC-CCC
Confidence            69999999999999999999887 64 443

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.40  E-value=0.00078  Score=39.90  Aligned_cols=22  Identities=14%  Similarity=0.446  Sum_probs=20.5

Q ss_pred             cccCCCCCcccccHHHHHHHhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLN  165 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~  165 (204)
                      +|.||||++.|..-..+.+|..
T Consensus         4 ~C~~~gC~k~F~~~~~L~~H~r   25 (29)
T d1a1ia1           4 ACPVESCDRRFSRSADLTRHIR   25 (29)
T ss_dssp             ECCSTTCCCEESSHHHHHHHTH
T ss_pred             ECCCCCCCcEECchhHhhhhcC
Confidence            6999999999999999999964

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00094  Score=39.76  Aligned_cols=22  Identities=23%  Similarity=0.652  Sum_probs=20.8

Q ss_pred             cccCCCCCcccccHHHHHHHhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLN  165 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~  165 (204)
                      +|.||||++.|.....+-+|..
T Consensus         4 ~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d2glia3           4 KCTFEGCRKSYSRLENLKTHLR   25 (30)
T ss_dssp             CCCSTTCCCCCSSHHHHHHHHH
T ss_pred             eCCCCCCCceECChhHhhhhcC
Confidence            6999999999999999999985

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0016  Score=38.86  Aligned_cols=25  Identities=20%  Similarity=0.595  Sum_probs=22.7

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcC
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHN  169 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~  169 (204)
                      .|.||||++.|.....+-+|+.+ |.
T Consensus         4 ~C~~~~C~k~F~~~~~L~~H~r~-Ht   28 (31)
T d1sp2a_           4 MCTWSYCGKRFTRSDELQRHKRT-HT   28 (31)
T ss_dssp             BCCSTTCCCBCSSHHHHHHHHTT-TS
T ss_pred             CCcCCCCCcCcCChhHhhhhcCc-cc
Confidence            69999999999999999999975 54

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.0017  Score=38.50  Aligned_cols=23  Identities=17%  Similarity=0.349  Sum_probs=21.3

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      +|.||||++.|.....+-+|..+
T Consensus         4 ~C~~~gCgk~F~~~~~L~~H~r~   26 (30)
T d1ubdc3           4 QCTFEGCGKRFSLDFNLRTHVRI   26 (30)
T ss_dssp             ECCSTTCCCEESCHHHHHHHHHH
T ss_pred             cCCCCCCCceECcHHHcCccccc
Confidence            69999999999999999999864

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.01  Score=35.28  Aligned_cols=26  Identities=27%  Similarity=0.641  Sum_probs=21.1

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcC
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHN  169 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~  169 (204)
                      .|.+|||+++|.+-.-+-.|..-.|.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~kyqh~   27 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKYQHI   27 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHGGG
T ss_pred             CCCCCCchhhhccHHHHHhHHHHHHh
Confidence            49999999999998777777666654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.017  Score=34.40  Aligned_cols=26  Identities=38%  Similarity=0.779  Sum_probs=24.3

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcC
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHN  169 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~  169 (204)
                      .|+-|||++..-|..++-||..+-|.
T Consensus         4 ~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           4 VCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             ECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             ecccCCCCcccCCHHHHHHHHHhhCC
Confidence            69999999999999999999998873

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.72  E-value=0.0061  Score=39.05  Aligned_cols=24  Identities=21%  Similarity=0.502  Sum_probs=21.2

Q ss_pred             ccccCCCCCcccccHHHHHHHhhh
Q psy15597        143 GVCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       143 g~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      -.|.||||++.|.....+.+|..+
T Consensus        19 y~C~~~~C~k~F~~~~~L~~H~r~   42 (47)
T d1ncsa_          19 FECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             EECCCTTCCCEECSSSSHHHHHHH
T ss_pred             eECCcCCCCccccCchHHHhhccc
Confidence            379999999999999999999653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.68  E-value=0.027  Score=33.91  Aligned_cols=27  Identities=26%  Similarity=0.557  Sum_probs=24.0

Q ss_pred             cccCCCCCcccccHHHHHHHhhhhcCC
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNKEHNL  170 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~eH~l  170 (204)
                      +|-.|||.+.|.+-..=.||-|..|.-
T Consensus         4 ~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           4 MCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             ECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             cccCCChhhhhcchhhhhhhccccccC
Confidence            699999999999988888999888853

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.95  E-value=0.13  Score=30.09  Aligned_cols=23  Identities=35%  Similarity=0.693  Sum_probs=21.1

Q ss_pred             cccCCCCCcccccHHHHHHHhhh
Q psy15597        144 VCKWPGCEAVCEDVQAFYKHLNK  166 (204)
Q Consensus       144 ~CkWPgCe~~~ed~~~flkHL~~  166 (204)
                      .|---||++.|.|..+.-|||++
T Consensus         3 ~CphkgC~K~Frd~saMRKHlht   25 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHT   25 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhc
Confidence            47888999999999999999986