Psyllid ID: psy15612

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
Protein Sequence
MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY
Secondary Structure (PSIPRED)
cEEEEcccccEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEcccccccEEEEEEcccccEEEEccccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccEEEEccccccccEEEEEEccccEEEEEccccccEEEEccccEEEEEEEccccEEEEEEcccccEEEcccccccEEEEccccccEEEEEEccccEEEEEcccccEEEEEEEEc
Coil and Loop (DISEMBL)
mylqsvspgrqlqqhdfssqifslgycpsgewlavgmensnvevlhalkpdkyqlhlHESCVLSLRFAACGKWFvstgkdnllnawrtpygasifqskesssvlscdisaddkyivtgsgdkkaTVYEVIY
Flexible Loop (DISEMBL)
mylqsvspgrqlqQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISaddkyivtgsgdkkaTVYEVIY
Low Complexity Region (SEG)
MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY
Disordered region (IsUnstruct)
******************SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK**SSVLSCDISADDKYIVTGSGDKKATVYE***
Disordered Region (DISOPRED)
MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY
Disordered Region (DISEMBL)
************QQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ*********CDISADDKYIVTGSGDKKATVYEVIY
Disordered Region (DISPRO)
*YL*SVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	131	2.2.26 [Sep-21-2011]
P16371	730	Protein groucho OS=Drosop	yes	N/A	0.938	0.168	0.951	3e-67
Q62441	773	Transducin-like enhancer	yes	N/A	0.938	0.159	0.943	9e-67
Q04727	773	Transducin-like enhancer	yes	N/A	0.938	0.159	0.943	1e-66
O42478	772	Transducin-like enhancer	N/A	N/A	0.938	0.159	0.943	1e-66
Q9JIT3	764	Transducin-like enhancer	yes	N/A	0.938	0.160	0.943	2e-66
Q08122	772	Transducin-like enhancer	no	N/A	0.938	0.159	0.943	2e-66
Q04726	772	Transducin-like enhancer	no	N/A	0.938	0.159	0.943	2e-66
Q07141	748	Transducin-like enhancer	no	N/A	0.938	0.164	0.934	8e-66
Q62440	770	Transducin-like enhancer	no	N/A	0.938	0.159	0.934	1e-65
O13166	761	Protein groucho-2 OS=Dani	no	N/A	0.938	0.161	0.934	1e-65

>sp|P16371|GROU_DROME Protein groucho OS=Drosophila melanogaster GN=gro PE=1 SV=3

 Score =  253 bits (645), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 117/123 (95%), Positives = 121/123 (98%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDFSSQIFSLGYCP+G+WLAVGMENS+VEVLHA KPDKYQLHLHESCVLSLRFA
Sbjct: 608 GRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSHVEVLHASKPDKYQLHLHESCVLSLRFA 667

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           ACGKWFVSTGKDNLLNAWRTPYGASIFQSKE+SSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct: 668 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKETSSVLSCDISTDDKYIVTGSGDKKATVYE 727

Query: 129 VIY 131
           VIY
Sbjct: 728 VIY 730

Transcriptional corepressor that regulates transcription when recruited to specific target DNA by hairy-related bHLH proteins. Maternally required for neurogenesis; in the segregation of the neuroectoderm. Directly or indirectly interacts with Notch and Delta.
Drosophila melanogaster (taxid: 7227)

>sp|Q62441|TLE4_MOUSE Transducin-like enhancer protein 4 OS=Mus musculus GN=Tle4 PE=1 SV=4

 Score =  251 bits (641), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 651 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 710

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct: 711 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 770

Query: 129 VIY 131
           VIY
Sbjct: 771 VIY 773

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by PAX5, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.

Mus musculus (taxid: 10090)

>sp|Q04727|TLE4_HUMAN Transducin-like enhancer protein 4 OS=Homo sapiens GN=TLE4 PE=1 SV=3

 Score =  251 bits (640), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 651 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 710

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct: 711 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 770

Query: 129 VIY 131
           VIY
Sbjct: 771 VIY 773

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by PAX5, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.

Homo sapiens (taxid: 9606)

>sp|O42478|TLE4_XENLA Transducin-like enhancer protein 4 OS=Xenopus laevis GN=tle4 PE=1 SV=2

 Score =  250 bits (639), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 650 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 709

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct: 710 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 769

Query: 129 VIY 131
           VIY
Sbjct: 770 VIY 772

Transcriptional corepressor. Functions with ripply2.2/bowline to down regulate transcription of tbx6-dependent gene expression. Represses transcription of siamois and nodal3.

Xenopus laevis (taxid: 8355)

>sp|Q9JIT3|TLE3_RAT Transducin-like enhancer protein 3 OS=Rattus norvegicus GN=Tle3 PE=2 SV=1

 Score =  250 bits (639), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 116/123 (94%), Positives = 120/123 (97%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGME+SNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 642 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFA 701

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 702 YCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 761

Query: 129 VIY 131
           VIY
Sbjct: 762 VIY 764

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.

Rattus norvegicus (taxid: 10116)

>sp|Q08122|TLE3_MOUSE Transducin-like enhancer protein 3 OS=Mus musculus GN=Tle3 PE=1 SV=3

 Score =  250 bits (639), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 116/123 (94%), Positives = 120/123 (97%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGME+SNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 650 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFA 709

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 710 YCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 769

Query: 129 VIY 131
           VIY
Sbjct: 770 VIY 772

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES (By similarity). May play an important role during spermatogenesis.

Mus musculus (taxid: 10090)

>sp|Q04726|TLE3_HUMAN Transducin-like enhancer protein 3 OS=Homo sapiens GN=TLE3 PE=1 SV=2

 Score =  250 bits (638), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 116/123 (94%), Positives = 120/123 (97%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGME+SNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 650 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFA 709

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 710 YCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 769

Query: 129 VIY 131
           VIY
Sbjct: 770 VIY 772

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.

Homo sapiens (taxid: 9606)

>sp|Q07141|TLE4_RAT Transducin-like enhancer protein 4 OS=Rattus norvegicus GN=Tle4 PE=2 SV=2

 Score =  248 bits (633), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 115/123 (93%), Positives = 118/123 (95%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 626 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 685

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFV  GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 686 HCGKWFVRPGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 745

Query: 129 VIY 131
           VIY
Sbjct: 746 VIY 748

Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by PAX5, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.

Rattus norvegicus (taxid: 10116)

>sp|Q62440|TLE1_MOUSE Transducin-like enhancer protein 1 OS=Mus musculus GN=Tle1 PE=1 SV=2

 Score =  248 bits (632), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 115/123 (93%), Positives = 119/123 (96%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGME+SNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 648 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFA 707

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct: 708 YCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 767

Query: 129 VIY 131
           VIY
Sbjct: 768 VIY 770

Transcriptional corepressor that binds to a number of transcription factors. Inhibits NF-kappa-B-regulated gene expression. Inhibits the transcriptional activation mediated by FOXA2, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES. Unusual function as coactivator for ESRRG.

Mus musculus (taxid: 10090)

>sp|O13166|TLE2_DANRE Protein groucho-2 OS=Danio rerio GN=gro2 PE=1 SV=1

 Score =  248 bits (632), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 115/123 (93%), Positives = 119/123 (96%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGME+SNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 639 GRQLQQHDFASQIFSLGYCPTGEWLAVGMESSNVEVLHHTKPDKYQLHLHESCVLSLKFA 698

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAW TPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 699 YCGKWFVSTGKDNLLNAWSTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 758

Query: 129 VIY 131
           VIY
Sbjct: 759 VIY 761

Transcriptional corepressor that binds to a number of transcription factors.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
328704354	762	PREDICTED: transducin-like enhancer prot	0.938	0.161	0.983	7e-68
189234796	813	PREDICTED: similar to groucho protein [T	0.938	0.151	0.983	8e-68
345497371	805	PREDICTED: transducin-like enhancer prot	0.938	0.152	0.975	2e-67
270002842	563	groucho-like protein [Tribolium castaneu	0.938	0.218	0.983	3e-67
170046693	747	groucho protein [Culex quinquefasciatus]	0.938	0.164	0.975	3e-67
158298100	752	AGAP010324-PA [Anopheles gambiae str. PE	0.938	0.163	0.975	3e-67
157108316	737	groucho protein (enhancer of split) [Aed	0.938	0.166	0.967	5e-67
242013098	733	protein groucho, putative [Pediculus hum	0.938	0.167	0.967	6e-67
357623272	704	groucho [Danaus plexippus]	0.938	0.174	0.967	6e-67
201025390	716	groucho [Bombyx mori] gi|194399145|gb|AC	0.938	0.171	0.967	7e-67

>gi|328704354|ref|XP_003242466.1| PREDICTED: transducin-like enhancer protein 3-like [Acyrthosiphon pisum]

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 121/123 (98%), Positives = 122/123 (99%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDFSSQIFSLGYCP+GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA
Sbjct: 640 GRQLQQHDFSSQIFSLGYCPTGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 699

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 700 TCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 759

Query: 129 VIY 131
           VIY
Sbjct: 760 VIY 762

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234796|ref|XP_967319.2| PREDICTED: similar to groucho protein [Tribolium castaneum]

 Score =  261 bits (666), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 121/123 (98%), Positives = 122/123 (99%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDFSSQIFSLGYCP+GEWLAVGMENSNVEVLHA KPDKYQLHLHESCVLSLRFA
Sbjct: 691 GRQLQQHDFSSQIFSLGYCPTGEWLAVGMENSNVEVLHATKPDKYQLHLHESCVLSLRFA 750

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 751 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 810

Query: 129 VIY 131
           VIY
Sbjct: 811 VIY 813

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345497371|ref|XP_001601479.2| PREDICTED: transducin-like enhancer protein 4 [Nasonia vitripennis]

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 120/123 (97%), Positives = 122/123 (99%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDFSSQIFSLGYCP+GEWLAVGMENSNVEVLHA KPDKYQLHLHESCVLSLRFA
Sbjct: 683 GRQLQQHDFSSQIFSLGYCPTGEWLAVGMENSNVEVLHATKPDKYQLHLHESCVLSLRFA 742

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           +CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 743 SCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 802

Query: 129 VIY 131
           VIY
Sbjct: 803 VIY 805

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002842|gb|EEZ99289.1| groucho-like protein [Tribolium castaneum]

 Score =  259 bits (661), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 121/123 (98%), Positives = 122/123 (99%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDFSSQIFSLGYCP+GEWLAVGMENSNVEVLHA KPDKYQLHLHESCVLSLRFA
Sbjct: 441 GRQLQQHDFSSQIFSLGYCPTGEWLAVGMENSNVEVLHATKPDKYQLHLHESCVLSLRFA 500

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 501 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 560

Query: 129 VIY 131
           VIY
Sbjct: 561 VIY 563

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170046693|ref|XP_001850888.1| groucho protein [Culex quinquefasciatus] gi|167869384|gb|EDS32767.1| groucho protein [Culex quinquefasciatus]

 Score =  259 bits (661), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 120/123 (97%), Positives = 122/123 (99%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDFSSQIFSLGYCP+GEWLAVGMENSNVEVLHA KPDKYQLHLHESCVLSL+FA
Sbjct: 625 GRQLQQHDFSSQIFSLGYCPTGEWLAVGMENSNVEVLHATKPDKYQLHLHESCVLSLKFA 684

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 685 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 744

Query: 129 VIY 131
           VIY
Sbjct: 745 VIY 747

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158298100|ref|XP_318239.4| AGAP010324-PA [Anopheles gambiae str. PEST] gi|157014491|gb|EAA13394.5| AGAP010324-PA [Anopheles gambiae str. PEST]

 Score =  259 bits (661), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 120/123 (97%), Positives = 122/123 (99%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDFSSQIFSLGYCP+GEWLAVGMENSNVEVLHA KPDKYQLHLHESCVLSL+FA
Sbjct: 630 GRQLQQHDFSSQIFSLGYCPTGEWLAVGMENSNVEVLHATKPDKYQLHLHESCVLSLKFA 689

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 690 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 749

Query: 129 VIY 131
           VIY
Sbjct: 750 VIY 752

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157108316|ref|XP_001650173.1| groucho protein (enhancer of split) [Aedes aegypti] gi|108879346|gb|EAT43571.1| AAEL005009-PA [Aedes aegypti]

 Score =  258 bits (659), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 119/123 (96%), Positives = 122/123 (99%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLHA KPDKYQLHLHESCVLSL+FA
Sbjct: 615 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHATKPDKYQLHLHESCVLSLKFA 674

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 675 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 734

Query: 129 VIY 131
           VIY
Sbjct: 735 VIY 737

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013098|ref|XP_002427252.1| protein groucho, putative [Pediculus humanus corporis] gi|212511585|gb|EEB14514.1| protein groucho, putative [Pediculus humanus corporis]

 Score =  258 bits (659), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 119/123 (96%), Positives = 122/123 (99%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLHA KPDKYQLHLHESCVLSLRFA
Sbjct: 611 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHATKPDKYQLHLHESCVLSLRFA 670

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE
Sbjct: 671 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 730

Query: 129 VIY 131
           V+Y
Sbjct: 731 VMY 733

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357623272|gb|EHJ74497.1| groucho [Danaus plexippus]

 Score =  258 bits (658), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 119/123 (96%), Positives = 123/123 (100%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDFSSQIFSLGYCP+GEWLAVGMENSNVEVLHA+KPDKYQLHLHESCVLSLRFA
Sbjct: 582 GRQLQQHDFSSQIFSLGYCPTGEWLAVGMENSNVEVLHAVKPDKYQLHLHESCVLSLRFA 641

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           +CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS+DDKYIVTGSGDKKATVYE
Sbjct: 642 SCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISSDDKYIVTGSGDKKATVYE 701

Query: 129 VIY 131
           VIY
Sbjct: 702 VIY 704

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|201025390|ref|NP_001128361.1| groucho [Bombyx mori] gi|194399145|gb|ACF60606.1| groucho protein [Bombyx mori]

 Score =  258 bits (658), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 119/123 (96%), Positives = 123/123 (100%)

Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDFSSQIFSLGYCP+GEWLAVGMENSNVEVLHA+KPDKYQLHLHESCVLSLRFA
Sbjct: 594 GRQLQQHDFSSQIFSLGYCPTGEWLAVGMENSNVEVLHAVKPDKYQLHLHESCVLSLRFA 653

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
           +CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS+DDKYIVTGSGDKKATVYE
Sbjct: 654 SCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISSDDKYIVTGSGDKKATVYE 713

Query: 129 VIY 131
           VIY
Sbjct: 714 VIY 716

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
FB|FBgn0001139	730	gro "groucho" [Drosophila mela	0.938	0.168	0.951	1.3e-61
UNIPROTKB|F1N9Y3	758	TLE4 "Uncharacterized protein"	0.938	0.162	0.943	3.4e-61
UNIPROTKB|F1NTJ7	739	TLE4 "Uncharacterized protein"	0.938	0.166	0.943	3.4e-61
UNIPROTKB|F1MWR6	774	TLE4 "Uncharacterized protein"	0.938	0.158	0.943	3.4e-61
UNIPROTKB|F1PDW7	774	TLE4 "Uncharacterized protein"	0.938	0.158	0.943	3.4e-61
UNIPROTKB|F1PGE6	711	TLE4 "Uncharacterized protein"	0.938	0.172	0.943	3.4e-61
UNIPROTKB|B3KQ29	410	TLE4 "Transducin-like enhancer	0.938	0.3	0.943	3.4e-61
UNIPROTKB|F8W6T6	748	TLE4 "cDNA FLJ58005" [Homo sap	0.938	0.164	0.943	3.4e-61
UNIPROTKB|F8W9R0	805	TLE4 "Transducin-like enhancer	0.938	0.152	0.943	3.4e-61
UNIPROTKB|G8JLG4	704	TLE4 "Transducin-like enhancer	0.938	0.174	0.943	3.4e-61

FB|FBgn0001139 gro "groucho" [Drosophila melanogaster (taxid:7227)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 117/123 (95%), Positives = 121/123 (98%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDFSSQIFSLGYCP+G+WLAVGMENS+VEVLHA KPDKYQLHLHESCVLSLRFA
Sbjct:   608 GRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSHVEVLHASKPDKYQLHLHESCVLSLRFA 667

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
             ACGKWFVSTGKDNLLNAWRTPYGASIFQSKE+SSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   668 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKETSSVLSCDISTDDKYIVTGSGDKKATVYE 727

Query:   129 VIY 131
             VIY
Sbjct:   728 VIY 730

GO:0007399 "nervous system development" evidence=NAS;IMP

GO:0070491 "repressing transcription factor binding" evidence=IGI;IPI

GO:0008134 "transcription factor binding" evidence=IMP;IPI

GO:0005515 "protein binding" evidence=IPI

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=TAS;IPI

GO:0003714 "transcription corepressor activity" evidence=IDA;NAS;TAS;IPI

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IGI;IDA;NAS;TAS

GO:0005634 "nucleus" evidence=IEA;NAS;TAS

GO:0007541 "sex determination, primary response to X:A ratio" evidence=TAS

GO:0003677 "DNA binding" evidence=NAS

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=NAS

GO:0001106 "RNA polymerase II transcription corepressor activity" evidence=IGI

GO:0007015 "actin filament organization" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0043234 "protein complex" evidence=IPI

GO:0045879 "negative regulation of smoothened signaling pathway" evidence=IMP

GO:0046331 "lateral inhibition" evidence=IMP

GO:0071837 "HMG box domain binding" evidence=IPI

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IDA

UNIPROTKB|F1N9Y3 TLE4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct:   636 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 695

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
              CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   696 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 755

Query:   129 VIY 131
             VIY
Sbjct:   756 VIY 758

GO:0005634 "nucleus" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0070491 "repressing transcription factor binding" evidence=IEA

UNIPROTKB|F1NTJ7 TLE4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct:   617 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 676

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
              CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   677 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 736

Query:   129 VIY 131
             VIY
Sbjct:   737 VIY 739

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|F1MWR6 TLE4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct:   652 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 711

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
              CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   712 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 771

Query:   129 VIY 131
             VIY
Sbjct:   772 VIY 774

GO:0070491 "repressing transcription factor binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1PDW7 TLE4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct:   652 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 711

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
              CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   712 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 771

Query:   129 VIY 131
             VIY
Sbjct:   772 VIY 774

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1PGE6 TLE4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct:   589 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 648

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
              CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   649 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 708

Query:   129 VIY 131
             VIY
Sbjct:   709 VIY 711

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|B3KQ29 TLE4 "Transducin-like enhancer protein 4" [Homo sapiens (taxid:9606)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct:   288 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 347

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
              CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   348 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 407

Query:   129 VIY 131
             VIY
Sbjct:   408 VIY 410

GO:0005634 "nucleus" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0003705 "RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0070491 "repressing transcription factor binding" evidence=IEA

UNIPROTKB|F8W6T6 TLE4 "cDNA FLJ58005" [Homo sapiens (taxid:9606)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct:   626 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 685

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
              CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   686 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 745

Query:   129 VIY 131
             VIY
Sbjct:   746 VIY 748

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|F8W9R0 TLE4 "Transducin-like enhancer protein 4" [Homo sapiens (taxid:9606)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct:   683 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 742

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
              CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   743 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 802

Query:   129 VIY 131
             VIY
Sbjct:   803 VIY 805

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|G8JLG4 TLE4 "Transducin-like enhancer protein 4" [Homo sapiens (taxid:9606)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 116/123 (94%), Positives = 119/123 (96%)

Query:     9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
             GRQLQQHDF+SQIFSLGYCP+GEWLAVGMENSNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct:   582 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLHVTKPDKYQLHLHESCVLSLKFA 641

Query:    69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
              CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct:   642 HCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 701

Query:   129 VIY 131
             VIY
Sbjct:   702 VIY 704

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q62441	TLE4_MOUSE	No assigned EC number	0.9430	0.9389	0.1591	yes	N/A
O42478	TLE4_XENLA	No assigned EC number	0.9430	0.9389	0.1593	N/A	N/A
Q62440	TLE1_MOUSE	No assigned EC number	0.9349	0.9389	0.1597	no	N/A
O02482	UNC37_CAEEL	No assigned EC number	0.6967	0.9312	0.1993	yes	N/A
Q04724	TLE1_HUMAN	No assigned EC number	0.9349	0.9389	0.1597	no	N/A
Q04726	TLE3_HUMAN	No assigned EC number	0.9430	0.9389	0.1593	no	N/A
Q04727	TLE4_HUMAN	No assigned EC number	0.9430	0.9389	0.1591	yes	N/A
P16371	GROU_DROME	No assigned EC number	0.9512	0.9389	0.1684	yes	N/A
Q07141	TLE4_RAT	No assigned EC number	0.9349	0.9389	0.1644	no	N/A
O42469	TLE1_XENLA	No assigned EC number	0.9024	0.9389	0.1603	N/A	N/A
Q08122	TLE3_MOUSE	No assigned EC number	0.9430	0.9389	0.1593	no	N/A
O13168	TLE1_DANRE	No assigned EC number	0.9349	0.9389	0.2299	no	N/A
Q9JIT3	TLE3_RAT	No assigned EC number	0.9430	0.9389	0.1609	yes	N/A
O13166	TLE2_DANRE	No assigned EC number	0.9349	0.9389	0.1616	no	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	131
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-09
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	5e-05
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-04
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	6e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 52.3 bits (126), Expect = 6e-09
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 4/123 (3%)

Query: 10  RQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLH-ALKPDKYQLHLHESCVLSLRFA 68
           R L+ H  +  +  + + P G+ LA G  +  ++V           L  H   V  +  +
Sbjct: 3   RTLKGH--TGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS 60

Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISADDKYIVTGSGDKKATVY 127
           A G +  S   D  +  W    G  +   +  +S V S   S D + + + S DK   V+
Sbjct: 61  ADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVW 120

Query: 128 EVI 130
           +V 
Sbjct: 121 DVE 123

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 48.5 bits (114), Expect = 1e-07
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 18  SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH---LHESCVLSLRFAACGKWF 74
           SS + S+ + P G+ LA G  +  V +                HE  V SL F+  G   
Sbjct: 284 SSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLL 343

Query: 75  VSTG-KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129
           VS G  D  +  W    G  +   +  S+VLS   S D + + +GS D    ++++
Sbjct: 344 VSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDL 399

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 6/125 (4%)

Query: 7   SPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEV--LHALKPDKYQLHLHESCVLS 64
                L  H    ++ S+ + P GE L     +  +++  L   K     L  HE+ V S
Sbjct: 168 KCVATLTGHT--GEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKC-LGTLRGHENGVNS 224

Query: 65  LRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISADDKYIVTGSGDKK 123
           + F+  G    S  +D  +  W    G  +   S  ++SV S   S D K + +GS D  
Sbjct: 225 VAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGT 284

Query: 124 ATVYE 128
             +++
Sbjct: 285 IRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 3   LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEV--LHALKPDKYQLHLHES 60
           L++    R L+ H  +  +  +     G +LA G  +  + +  L   +     L  H S
Sbjct: 38  LETGELLRTLKGH--TGPVRDVAASADGTYLASGSSDKTIRLWDLETGEC-VRTLTGHTS 94

Query: 61  CVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTG 118
            V S+ F+  G+   S+ +D  +  W    G  +   +      V S   S D  ++ + 
Sbjct: 95  YVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDW-VNSVAFSPDGTFVASS 153

Query: 119 SGDKKATVYEV 129
           S D    ++++
Sbjct: 154 SQDGTIKLWDL 164

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 41.2 bits (95), Expect = 5e-05
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 2/114 (1%)

Query: 18  SSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS 76
              + SL + P G  L  G  ++  + +         +     S VLS+ F+  G+   S
Sbjct: 328 EGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSS 387

Query: 77  TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV 129
              D  +  W    G+ +      +S V S D S D K + +GS D    ++++
Sbjct: 388 GSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDL 441

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 38.9 bits (89), Expect = 3e-04
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 7/134 (5%)

Query: 2   YLQSVSPGRQLQQHDF-SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY---QLHL 57
            L  +  G+ L      +  + SL + P G  L     +     L  L   K     L  
Sbjct: 181 KLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSG 240

Query: 58  HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISADDKYI 115
           H   V+S  F+  G    S   D  +  W     +S+ ++    SSSVLS   S D K +
Sbjct: 241 HSDSVVSS-FSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLL 299

Query: 116 VTGSGDKKATVYEV 129
            +GS D    ++++
Sbjct: 300 ASGSSDGTVRLWDL 313

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 38.1 bits (87), Expect = 6e-04
 Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 5/103 (4%)

Query: 26  YCPSGEWLAVGMENSNVEV--LHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLL 83
           + P G  LA G  +  + +  L +       L  H S VLS+ F+  GK   S   D  +
Sbjct: 249 FSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTV 308

Query: 84  NAWRTPYGASIFQSKE---SSSVLSCDISADDKYIVTGSGDKK 123
             W    G  +           V S   S D   +V+G  D  
Sbjct: 309 RLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDG 351

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 6/130 (4%)

Query: 3   LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESC 61
           L++    R L  H  +S + S+ + P G  L+    +  ++V           L  H   
Sbjct: 80  LETGECVRTLTGH--TSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDW 137

Query: 62  VLSLRFAACGKWFVSTGK-DNLLNAWRTPYGASIFQ-SKESSSVLSCDISADDKYIVTGS 119
           V S+ F+  G  FV++   D  +  W    G  +   +  +  V S   S D + +++ S
Sbjct: 138 VNSVAFSPDGT-FVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSS 196

Query: 120 GDKKATVYEV 129
            D    ++++
Sbjct: 197 SDGTIKLWDL 206

Length = 289

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	131
KOG0272|consensus	459		100.0
KOG0272|consensus	459		100.0
KOG0279|consensus	315		99.97
KOG0263|consensus	707		99.97
KOG0263|consensus	707		99.97
KOG0271|consensus	480		99.97
KOG0271|consensus	480		99.96
KOG0266|consensus	456		99.96
KOG0266|consensus	456		99.96
KOG0286|consensus	343		99.96
KOG0279|consensus	315		99.95
KOG0285|consensus	460		99.95
KOG0315|consensus	311		99.95
PTZ00420	568	coronin; Provisional	99.95
KOG0286|consensus	343		99.95
KOG0291|consensus	893		99.95
KOG0645|consensus	312		99.95
KOG0315|consensus	311		99.95
KOG0295|consensus	406		99.94
PTZ00421	493	coronin; Provisional	99.94
KOG0284|consensus	464		99.94
KOG0292|consensus	1202		99.94
KOG0273|consensus	524		99.94
KOG0278|consensus	334		99.93
PTZ00421	493	coronin; Provisional	99.93
KOG0282|consensus	503		99.92
KOG0284|consensus	464		99.92
KOG0319|consensus	775		99.92
KOG0273|consensus	524		99.92
KOG0289|consensus	506		99.92
KOG0276|consensus	794		99.92
KOG0291|consensus	893		99.92
PTZ00420	568	coronin; Provisional	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
KOG0295|consensus	406		99.91
KOG0319|consensus	775		99.91
KOG0269|consensus	839		99.91
KOG0265|consensus	338		99.91
KOG0277|consensus	311		99.91
KOG0282|consensus	503		99.91
KOG0277|consensus	311		99.9
KOG0296|consensus	399		99.9
KOG0318|consensus	603		99.9
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.9
KOG0265|consensus	338		99.9
KOG0281|consensus	499		99.9
KOG0645|consensus	312		99.9
KOG0313|consensus	423		99.9
KOG0285|consensus	460		99.9
KOG0316|consensus	307		99.9
KOG0275|consensus	508		99.9
KOG0276|consensus	794		99.9
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.9
KOG0264|consensus	422		99.89
KOG0302|consensus	440		99.89
KOG0264|consensus	422		99.89
KOG0281|consensus	499		99.89
KOG0647|consensus	347		99.89
KOG0643|consensus	327		99.89
KOG0316|consensus	307		99.89
KOG0269|consensus	839		99.89
KOG0647|consensus	347		99.89
KOG0267|consensus	825		99.88
PLN00181	793	protein SPA1-RELATED; Provisional	99.88
KOG0310|consensus	487		99.88
KOG0318|consensus	603		99.88
KOG0283|consensus	712		99.88
KOG0310|consensus	487		99.88
KOG1407|consensus	313		99.88
KOG0973|consensus	942		99.88
KOG0292|consensus	1202		99.87
KOG0283|consensus	712		99.87
KOG0308|consensus	735		99.87
KOG0293|consensus	519		99.87
KOG0639|consensus	705		99.87
KOG0274|consensus	537		99.87
KOG1446|consensus	311		99.87
KOG0305|consensus	484		99.87
KOG0313|consensus	423		99.86
KOG0288|consensus	459		99.86
KOG0306|consensus	888		99.86
KOG0640|consensus	430		99.86
KOG0268|consensus	433		99.86
KOG0305|consensus	484		99.86
KOG0303|consensus	472		99.86
KOG0639|consensus	705		99.85
KOG0274|consensus	537		99.85
KOG0302|consensus	440		99.85
KOG0646|consensus	476		99.85
KOG0278|consensus	334		99.85
KOG0772|consensus	641		99.85
KOG0306|consensus	888		99.85
KOG4283|consensus	397		99.84
KOG0640|consensus	430		99.84
KOG0300|consensus	481		99.84
KOG0267|consensus	825		99.84
KOG0294|consensus	362		99.84
KOG0289|consensus	506		99.84
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.84
KOG1036|consensus	323		99.83
KOG2110|consensus	391		99.83
KOG1274|consensus	933		99.83
KOG0641|consensus	350		99.83
KOG0294|consensus	362		99.82
KOG1407|consensus	313		99.82
KOG0270|consensus	463		99.82
KOG0275|consensus	508		99.81
KOG1063|consensus	764		99.81
KOG1446|consensus	311		99.81
KOG0772|consensus	641		99.81
KOG0296|consensus	399		99.81
KOG1539|consensus	910		99.8
KOG0322|consensus	323		99.8
KOG0643|consensus	327		99.8
KOG0308|consensus	735		99.8
KOG0288|consensus	459		99.8
KOG2919|consensus	406		99.8
KOG1332|consensus	299		99.8
KOG0293|consensus	519		99.8
KOG1445|consensus	1012		99.79
KOG1273|consensus	405		99.79
KOG1036|consensus	323		99.79
KOG0300|consensus	481		99.78
KOG4283|consensus	397		99.78
KOG0268|consensus	433		99.78
KOG2394|consensus	636		99.78
KOG2096|consensus	420		99.77
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.77
KOG0646|consensus	476		99.77
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.76
KOG0299|consensus	479		99.76
KOG1063|consensus	764		99.76
KOG2111|consensus	346		99.76
KOG1034|consensus	385		99.76
KOG0299|consensus	479		99.76
KOG2106|consensus	626		99.75
KOG2096|consensus	420		99.75
KOG1188|consensus	376		99.75
KOG0641|consensus	350		99.74
KOG0973|consensus	942		99.74
KOG1009|consensus	434		99.74
KOG1007|consensus	370		99.74
KOG1332|consensus	299		99.74
KOG2055|consensus	514		99.74
KOG1272|consensus	545		99.74
PRK01742	429	tolB translocation protein TolB; Provisional	99.73
KOG1273|consensus	405		99.73
KOG0301|consensus	745		99.73
KOG0303|consensus	472		99.73
KOG2048|consensus	691		99.73
KOG0290|consensus	364		99.72
KOG0301|consensus	745		99.71
KOG1445|consensus	1012		99.71
KOG0771|consensus	398		99.71
KOG2055|consensus	514		99.7
KOG3881|consensus	412		99.7
KOG2048|consensus	691		99.69
KOG1009|consensus	434		99.68
KOG1310|consensus	758		99.68
KOG1034|consensus	385		99.68
KOG1539|consensus	910		99.68
KOG2919|consensus	406		99.68
KOG0270|consensus	463		99.67
KOG0321|consensus	720		99.67
KOG1007|consensus	370		99.67
PRK05137	435	tolB translocation protein TolB; Provisional	99.67
KOG4378|consensus	673		99.66
KOG1274|consensus	933		99.66
KOG4378|consensus	673		99.66
KOG1523|consensus	361		99.66
KOG2394|consensus	636		99.66
KOG1408|consensus	1080		99.65
KOG4328|consensus	498		99.65
COG2319	466	FOG: WD40 repeat [General function prediction only	99.64
KOG0771|consensus	398		99.64
PRK03629	429	tolB translocation protein TolB; Provisional	99.64
PRK04922	433	tolB translocation protein TolB; Provisional	99.64
KOG1963|consensus	792		99.63
KOG1523|consensus	361		99.63
PRK03629	429	tolB translocation protein TolB; Provisional	99.63
KOG0307|consensus	1049		99.62
KOG2106|consensus	626		99.62
KOG1408|consensus	1080		99.62
PRK05137	435	tolB translocation protein TolB; Provisional	99.62
PRK02889	427	tolB translocation protein TolB; Provisional	99.62
KOG0650|consensus	733		99.61
KOG4227|consensus	609		99.61
PRK01742	429	tolB translocation protein TolB; Provisional	99.61
KOG2445|consensus	361		99.61
KOG0642|consensus	577		99.61
KOG0644|consensus	1113		99.61
PRK04922	433	tolB translocation protein TolB; Provisional	99.61
KOG2445|consensus	361		99.6
KOG0642|consensus	577		99.6
PRK02889	427	tolB translocation protein TolB; Provisional	99.59
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.59
KOG1524|consensus	737		99.58
COG2319	466	FOG: WD40 repeat [General function prediction only	99.58
KOG0307|consensus	1049		99.57
PRK00178	430	tolB translocation protein TolB; Provisional	99.56
KOG0974|consensus	967		99.56
KOG1188|consensus	376		99.56
KOG1272|consensus	545		99.55
KOG4497|consensus	447		99.55
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.54
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.54
KOG2110|consensus	391		99.54
KOG0321|consensus	720		99.54
KOG1538|consensus	1081		99.53
PRK11028	330	6-phosphogluconolactonase; Provisional	99.53
KOG0649|consensus	325		99.52
KOG4328|consensus	498		99.52
KOG2139|consensus	445		99.52
PRK04792	448	tolB translocation protein TolB; Provisional	99.52
PRK11028	330	6-phosphogluconolactonase; Provisional	99.51
KOG3914|consensus	390		99.51
KOG4227|consensus	609		99.51
KOG0974|consensus	967		99.5
KOG1517|consensus	1387		99.5
KOG0649|consensus	325		99.5
PRK00178	430	tolB translocation protein TolB; Provisional	99.49
KOG0290|consensus	364		99.49
PRK04792	448	tolB translocation protein TolB; Provisional	99.47
KOG2139|consensus	445		99.46
KOG2315|consensus	566		99.46
KOG1524|consensus	737		99.46
KOG1538|consensus	1081		99.44
KOG1240|consensus	1431		99.43
KOG2111|consensus	346		99.42
KOG2321|consensus	703		99.4
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.38
KOG0650|consensus	733		99.37
COG4946	668	Uncharacterized protein related to the periplasmic	99.35
PRK01029	428	tolB translocation protein TolB; Provisional	99.33
PRK01029	428	tolB translocation protein TolB; Provisional	99.33
KOG1587|consensus	555		99.32
KOG4547|consensus	541		99.31
PRK04043	419	tolB translocation protein TolB; Provisional	99.31
KOG1310|consensus	758		99.29
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.29
KOG1587|consensus	555		99.29
KOG3881|consensus	412		99.28
COG4946	668	Uncharacterized protein related to the periplasmic	99.28
KOG0280|consensus	339		99.26
KOG3914|consensus	390		99.25
KOG2321|consensus	703		99.24
KOG4547|consensus	541		99.23
KOG0322|consensus	323		99.22
KOG0644|consensus	1113		99.19
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.19
KOG4497|consensus	447		99.18
KOG1409|consensus	404		99.18
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	99.18
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.18
PRK04043	419	tolB translocation protein TolB; Provisional	99.17
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.17
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.16
KOG1517|consensus	1387		99.16
KOG1963|consensus	792		99.14
KOG1064|consensus	2439		99.13
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	99.1
KOG2041|consensus	1189		99.07
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.04
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.03
KOG4532|consensus	344		99.02
KOG0280|consensus	339		99.01
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.0
KOG2695|consensus	425		98.99
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.98
KOG1334|consensus	559		98.97
KOG4532|consensus	344		98.95
PRK02888	635	nitrous-oxide reductase; Validated	98.94
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.91
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.88
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.88
KOG1240|consensus	1431		98.88
KOG4714|consensus	319		98.87
KOG1409|consensus	404		98.86
KOG2315|consensus	566		98.84
KOG0309|consensus	1081		98.79
KOG1275|consensus	1118		98.78
KOG3621|consensus	726		98.78
KOG2695|consensus	425		98.75
KOG2066|consensus	846		98.74
KOG1354|consensus	433		98.73
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.73
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.72
KOG4640|consensus	665		98.71
KOG1354|consensus	433		98.66
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.64
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.61
KOG1334|consensus	559		98.59
KOG4190|consensus	1034		98.59
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.58
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.57
KOG1064|consensus	2439		98.54
KOG1912|consensus	1062		98.53
KOG2314|consensus	698		98.53
KOG4714|consensus	319		98.5
KOG2314|consensus	698		98.49
KOG3617|consensus	1416		98.49
KOG2041|consensus	1189		98.46
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.45
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.44
KOG1645|consensus	463		98.44
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.41
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.4
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.35
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.31
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.3
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.29
PRK02888	635	nitrous-oxide reductase; Validated	98.29
KOG0309|consensus	1081		98.28
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.26
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.26
KOG1275|consensus	1118		98.25
KOG4640|consensus	665		98.25
KOG1645|consensus	463		98.19
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.19
KOG2079|consensus	1206		98.18
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.17
COG3391	381	Uncharacterized conserved protein [Function unknow	98.17
KOG1920|consensus	1265		98.14
KOG1008|consensus	783		98.14
KOG2066|consensus	846		98.11
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.07
KOG1920|consensus	1265		98.06
KOG2395|consensus	644		98.05
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.05
KOG1832|consensus	1516		98.02
KOG0882|consensus	558		98.0
KOG2444|consensus	238		97.96
PRK13616	591	lipoprotein LpqB; Provisional	97.92
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.87
KOG3617|consensus	1416		97.87
PRK13616	591	lipoprotein LpqB; Provisional	97.87
KOG0882|consensus	558		97.85
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.85
KOG4190|consensus	1034		97.82
COG3391	381	Uncharacterized conserved protein [Function unknow	97.81
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.8
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.79
KOG4649|consensus	354		97.78
KOG1912|consensus	1062		97.78
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.78
KOG2114|consensus	933		97.76
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.65
KOG4649|consensus	354		97.63
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.6
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	97.59
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	97.57
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.52
KOG3621|consensus	726		97.52
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.47
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.43
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.36
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.34
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.31
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.31
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.31
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	97.25
KOG2114|consensus	933		97.21
KOG1008|consensus	783		97.21
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.21
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	97.19
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.06
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.03
KOG1832|consensus	1516		96.96
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	96.96
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	96.96
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.95
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	96.83
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.77
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.73
KOG2079|consensus	1206		96.73
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.63
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	96.62
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.61
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.6
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.57
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	96.55
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.52
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	96.42
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.39
KOG2377|consensus	657		96.32
PRK10115	686	protease 2; Provisional	96.26
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.19
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	96.09
KOG4499|consensus	310		95.99
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.93
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.9
KOG3630|consensus	1405		95.86
KOG4441|consensus	571		95.84
KOG1897|consensus	1096		95.84
COG5167	776	VID27 Protein involved in vacuole import and degra	95.81
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	95.66
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	95.64
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	95.59
KOG2247|consensus	615		95.55
PHA02713	557	hypothetical protein; Provisional	95.37
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	95.26
KOG1916|consensus	1283		95.2
COG5276	370	Uncharacterized conserved protein [Function unknow	95.2
PHA02713	557	hypothetical protein; Provisional	95.13
KOG2280|consensus	829		95.12
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	95.11
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	95.09
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	94.96
KOG1916|consensus	1283		94.86
KOG3630|consensus	1405		94.85
COG5276	370	Uncharacterized conserved protein [Function unknow	94.85
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	94.84
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	94.8
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	94.53
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	94.53
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	94.5
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	94.43
COG4590	733	ABC-type uncharacterized transport system, permeas	94.41
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	94.34
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	94.33
KOG2444|consensus	238		94.21
KOG2377|consensus	657		94.2
PHA03098	534	kelch-like protein; Provisional	94.13
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	94.1
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	94.1
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	94.04
KOG2395|consensus	644		94.03
PHA03098	534	kelch-like protein; Provisional	94.0
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	93.94
TIGR03032	335	conserved hypothetical protein TIGR03032. This pro	93.9
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	93.9
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	93.38
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	93.18
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	93.11
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	93.0
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	92.99
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	92.61
KOG1900|consensus	1311		92.57
KOG4441|consensus	571		92.53
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	92.38
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	92.37
PF12768	281	Rax2: Cortical protein marker for cell polarity	92.31
KOG4460|consensus	741		92.29
KOG4499|consensus	310		92.06
KOG4460|consensus	741		91.92
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	91.8
KOG3616|consensus	1636		91.74
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	91.44
KOG1900|consensus	1311		91.4
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	91.38
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	91.24
KOG0918|consensus	476		91.15
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	91.1
PRK10115	686	protease 2; Provisional	90.04
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	89.94
COG5308	1263	NUP170 Nuclear pore complex subunit [Intracellular	89.93
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	89.55
KOG3616|consensus	1636		89.45
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	89.36
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	88.7
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	88.68
TIGR03032	335	conserved hypothetical protein TIGR03032. This pro	87.56
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	87.07
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	86.95
KOG2280|consensus	829		86.19
KOG2247|consensus	615		85.93
PHA02790	480	Kelch-like protein; Provisional	85.85
PF12768	281	Rax2: Cortical protein marker for cell polarity	85.46
COG4880	603	Secreted protein containing C-terminal beta-propel	85.19
COG5167	776	VID27 Protein involved in vacuole import and degra	85.11
KOG1897|consensus	1096		85.01
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	84.96
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	84.77
KOG1520|consensus	376		84.06
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	83.96
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	83.95
KOG1520|consensus	376		83.71
COG4590	733	ABC-type uncharacterized transport system, permeas	83.44
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	81.96
PLN02153	341	epithiospecifier protein	81.79
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	81.18
PRK13684	334	Ycf48-like protein; Provisional	81.03
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	80.05

>KOG0272|consensus

Probab=100.00  E-value=5.6e-34  Score=171.98  Aligned_cols=130  Identities=22%  Similarity=0.331  Sum_probs=123.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      +++|++.+..++..+ +|..+|..++|+|+|++|++++.|.+-++||+.++.. ....+|...|.+++|+|||..+++|+
T Consensus       243 vklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGG  322 (459)
T KOG0272|consen  243 VKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGG  322 (459)
T ss_pred             eeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccC
Confidence            589999988888888 8999999999999999999999999999999998874 55688999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|..-++||+++|+++ ++.+|...|..++|+|+|..+++|+.|++++|||++
T Consensus       323 lD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR  375 (459)
T KOG0272|consen  323 LDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLR  375 (459)
T ss_pred             ccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeec
Confidence            9999999999999998 888899999999999999999999999999999997

>KOG0272|consensus

Probab=100.00  E-value=1.4e-31  Score=161.71  Aligned_cols=127  Identities=23%  Similarity=0.383  Sum_probs=121.0

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc-CCCEEEEeC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA-CGKWFVSTG   78 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~~~~~~   78 (131)
                      ||||+++|+++..+ +|..+|.+++|+|+|..+++|+.|+++++||++.... ..+.+|...|..++|+| .|+++++++
T Consensus       328 RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Tas  407 (459)
T KOG0272|consen  328 RVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTAS  407 (459)
T ss_pred             heeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcc
Confidence            79999999999998 9999999999999999999999999999999997764 77899999999999999 688999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      .|+++++|...+..++ .+.+|.+.|.+++.++++.++++++.|+++++|.
T Consensus       408 yD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  408 YDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             cCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            9999999999999988 7889999999999999999999999999999995

>KOG0279|consensus

Probab=99.97  E-value=3.1e-30  Score=149.16  Aligned_cols=130  Identities=17%  Similarity=0.302  Sum_probs=119.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc--ccceEEEEEccC--CCEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH--ESCVLSLRFAAC--GKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~--~~~~~   75 (131)
                      +|+||+.+++....+ +|...|.+++|+||.+++++|+.|.++.+|+..+....++..+  ..-|.|+.|+|+  ...|+
T Consensus        87 lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Iv  166 (315)
T KOG0279|consen   87 LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIV  166 (315)
T ss_pred             EEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEE
Confidence            589999999988888 9999999999999999999999999999999988776665544  678999999997  77899


Q ss_pred             EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.|+++++||+++-+.. ...+|.+.++.+++||||.+.++|+.||.+.+||++
T Consensus       167 s~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~  222 (315)
T KOG0279|consen  167 SASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN  222 (315)
T ss_pred             EccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEcc
Confidence            9999999999999988877 777899999999999999999999999999999986

>KOG0263|consensus

Probab=99.97  E-value=4.4e-30  Score=164.36  Aligned_cols=129  Identities=19%  Similarity=0.402  Sum_probs=122.0

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      ++|.....++++.+ +|...|.++.|+|+..++++|+.|.++++||..++.. +.+.+|.++|.+++|||+|+++++|+.
T Consensus       518 rLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~e  597 (707)
T KOG0263|consen  518 RLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDE  597 (707)
T ss_pred             eeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeeccc
Confidence            68998888888888 9999999999999999999999999999999998875 778899999999999999999999999


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.|.+||+.+++.+ ...+|.+.+.++.|+.+|..|++++.|.+|++||+.
T Consensus       598 d~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~  649 (707)
T KOG0263|consen  598 DGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT  649 (707)
T ss_pred             CCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEch
Confidence            999999999999888 778899999999999999999999999999999985

>KOG0263|consensus

Probab=99.97  E-value=1.6e-29  Score=161.86  Aligned_cols=131  Identities=15%  Similarity=0.254  Sum_probs=123.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      ||+|.+.+..++..+ +|..+|..+.|+|-|-++++++.|++.++|....... +.+.+|-+.+.|++|+|+..++++||
T Consensus       475 vRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGS  554 (707)
T KOG0263|consen  475 VRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGS  554 (707)
T ss_pred             eeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCC
Confidence            689999999999888 9999999999999999999999999999999987664 66788999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      .|.++++||..+|..+ ...+|.++|.+++|||+|++|++|+.|+.|++||+.+
T Consensus       555 sD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~  608 (707)
T KOG0263|consen  555 SDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLAN  608 (707)
T ss_pred             CCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCC
Confidence            9999999999999988 6788999999999999999999999999999999863

>KOG0271|consensus

Probab=99.97  E-value=2.4e-29  Score=151.10  Aligned_cols=129  Identities=18%  Similarity=0.335  Sum_probs=118.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEcc-----CCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAA-----CGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~-----~~~   72 (131)
                      +|+||..+..+..+. +|...|.+++|+|||+.|++|+.||+|++||..+++.  ..+.+|...|.+++|.|     ..+
T Consensus       139 vR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r  218 (480)
T KOG0271|consen  139 VRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCR  218 (480)
T ss_pred             EEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCcc
Confidence            589999999999888 8999999999999999999999999999999988875  67899999999999986     567


Q ss_pred             EEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         73 WFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .+++++.||.++|||+..+.++ .+.+|...|+|+.|..+ .++++++.|++|++|+..
T Consensus       219 ~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~  276 (480)
T KOG0271|consen  219 RLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRAL  276 (480)
T ss_pred             ceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEcc
Confidence            8999999999999999988888 77889999999999655 578999999999999863

>KOG0271|consensus

Probab=99.96  E-value=4.8e-29  Score=149.85  Aligned_cols=115  Identities=17%  Similarity=0.299  Sum_probs=107.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +|.+.|.+++|+|+|..|++|+.|.++++||+.+... ....+|...|.+++|+|||+.|++|+.||.|.+||..+|+..
T Consensus       113 GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~  192 (480)
T KOG0271|consen  113 GHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQI  192 (480)
T ss_pred             CCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcc
Confidence            7999999999999999999999999999999988775 678999999999999999999999999999999999999988


Q ss_pred             --EecCCCCCeEEEEECC-----CCCEEEEecCCCcEEEEEee
Q psy15612         95 --FQSKESSSVLSCDISA-----DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 --~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~vw~~~  130 (131)
                        .+.+|...|.+++|.|     ..+++++++.||.++|||+.
T Consensus       193 g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~  235 (480)
T KOG0271|consen  193 GRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTK  235 (480)
T ss_pred             cccccCcccceeEEeecccccCCCccceecccCCCCEEEEEcc
Confidence              7888999999999976     57899999999999999974

>KOG0266|consensus

Probab=99.96  E-value=1.9e-27  Score=151.66  Aligned_cols=130  Identities=18%  Similarity=0.317  Sum_probs=117.9

Q ss_pred             CEEEeCCCCc--eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-C-eEEeeccccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-D-KYQLHLHESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~-~~~~~~~~~~v~~~~~~~~~~~~~   75 (131)
                      +++|++.+.+  .+..+ +|...|..++|+|+++.+++++.|+++++||+... . .+.+.+|...|++++|+|+++.++
T Consensus       183 i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~  262 (456)
T KOG0266|consen  183 IRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLV  262 (456)
T ss_pred             EEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEE
Confidence            4788887666  55555 89999999999999999999999999999999443 4 477889999999999999999999


Q ss_pred             EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.|+++++||++++++. .+.+|.+.|.+++|+++++++++++.|+.+++||+.
T Consensus       263 Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~  318 (456)
T KOG0266|consen  263 SGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLE  318 (456)
T ss_pred             EecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECC
Confidence            9999999999999999988 888899999999999999999999999999999974

>KOG0266|consensus

Probab=99.96  E-value=5.5e-27  Score=149.51  Aligned_cols=130  Identities=22%  Similarity=0.418  Sum_probs=116.3

Q ss_pred             CEEEeC-CCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSV-SPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~-~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+ ..+..++++ +|...|++++|+|+++.+++|+.|++|++||++++++ ..+..|...|.+++|+++++.++++
T Consensus       227 iriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~  306 (456)
T KOG0266|consen  227 LRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSA  306 (456)
T ss_pred             EEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEc
Confidence            689999 455788888 9999999999999999999999999999999999876 7789999999999999999999999


Q ss_pred             CCCCeEEEeeCCCCc--eE-EecCCCC--CeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGA--SI-FQSKESS--SVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~--~~-~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|+.+++||+.++.  +. ....+..  .+.+++|+|++.++++++.|+.+++||++
T Consensus       307 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~  364 (456)
T KOG0266|consen  307 SYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR  364 (456)
T ss_pred             CCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc
Confidence            999999999999998  33 3333322  68999999999999999999999999985

>KOG0286|consensus

Probab=99.96  E-value=5.2e-27  Score=136.81  Aligned_cols=128  Identities=18%  Similarity=0.253  Sum_probs=117.9

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      .+||+++++.+..+ +|.+.|.++.++| +++.+++|+.|+..++||++.+.+ +.+.+|++.|..++|.|+|.-|++|+
T Consensus       169 alWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGS  248 (343)
T KOG0286|consen  169 ALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGS  248 (343)
T ss_pred             EEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecC
Confidence            48999999999998 9999999999999 899999999999999999998885 77899999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceEEec---CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASIFQS---KESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .|++.++||++..+.+...   .....|.+++||..|++|+.|..|..+.+||.
T Consensus       249 DD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt  302 (343)
T KOG0286|consen  249 DDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT  302 (343)
T ss_pred             CCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence            9999999999988877322   23577899999999999999999999999996

>KOG0279|consensus

Probab=99.95  E-value=7.1e-27  Score=135.38  Aligned_cols=129  Identities=16%  Similarity=0.198  Sum_probs=112.1

Q ss_pred             EEEeCC-----CCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEE
Q psy15612          2 YLQSVS-----PGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         2 ~iwd~~-----~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~   74 (131)
                      .+|++.     .|..++.+ +|...|..+..++||++.++++.|+++++||+.+++. +.+.+|...|.+++|+||.+.+
T Consensus        41 i~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qi  120 (315)
T KOG0279|consen   41 IVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI  120 (315)
T ss_pred             EEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCcee
Confidence            467654     46666667 8999999999999999999999999999999999875 7789999999999999999999


Q ss_pred             EEeCCCCeEEEeeCCCCceEEec-C-CCCCeEEEEECCC--CCEEEEecCCCcEEEEEee
Q psy15612         75 VSTGKDNLLNAWRTPYGASIFQS-K-ESSSVLSCDISAD--DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~~~~-~-~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++|++|++|+.......... . +.+.|.|+.|+|+  ..++++++.|+++++||++
T Consensus       121 vSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~  180 (315)
T KOG0279|consen  121 VSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLR  180 (315)
T ss_pred             ecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccC
Confidence            99999999999999855444322 2 3789999999998  6789999999999999985

>KOG0285|consensus

Probab=99.95  E-value=3.5e-27  Score=140.99  Aligned_cols=131  Identities=18%  Similarity=0.219  Sum_probs=123.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |+|||+.+|+...++ +|-+.|..+++++-..++++++.|+.|+.||++.++. +...+|-+.|++++.+|.-..+++++
T Consensus       175 ikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~g  254 (460)
T KOG0285|consen  175 IKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGG  254 (460)
T ss_pred             eEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecC
Confidence            589999999998888 7999999999999999999999999999999998885 77889999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      +|..+++||+++...+ .+.+|...|.++.+.|....+++++.|++|++||+++
T Consensus       255 rDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~a  308 (460)
T KOG0285|consen  255 RDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRA  308 (460)
T ss_pred             CcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeecc
Confidence            9999999999998888 7888999999999999888899999999999999975

>KOG0315|consensus

Probab=99.95  E-value=1e-26  Score=133.24  Aligned_cols=129  Identities=15%  Similarity=0.218  Sum_probs=117.3

Q ss_pred             CEEEeCCCCceeeeecCC-CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFS-SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      ||+|...+|.+..++.|+ +.|+.+++.|+++.|+.++. ..|++||+.+..   +..+.+|...|..+.|..+|+++++
T Consensus        22 IRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyT  100 (311)
T KOG0315|consen   22 IRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYT  100 (311)
T ss_pred             eeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEe
Confidence            799999999999999665 57999999999999998875 569999998776   3678899999999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.||+++|||++...+.....+.++|.++..+|+...|+++..+|.|++||+.
T Consensus       101 gseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~  154 (311)
T KOG0315|consen  101 GSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLG  154 (311)
T ss_pred             cCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEcc
Confidence            999999999999987766777788999999999999999999999999999985

>PTZ00420 coronin; Provisional

Probab=99.95  E-value=1.5e-25  Score=144.58  Aligned_cols=130  Identities=18%  Similarity=0.254  Sum_probs=109.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC---------eEEeeccccceEEEEEcc
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD---------KYQLHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~---------~~~~~~~~~~v~~~~~~~   69 (131)
                      |++|+......+..+ +|.+.|.+++|+|+ +..|++|+.|+.|++||+.+..         ...+.+|...|.+++|+|
T Consensus        56 I~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P  135 (568)
T PTZ00420         56 IRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNP  135 (568)
T ss_pred             EEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECC
Confidence            356666555555555 89999999999997 7899999999999999997532         124577899999999999


Q ss_pred             CCCEE-EEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         70 CGKWF-VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 ~~~~~-~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++..+ ++++.|+.+++||+++++......+...+.+++|+|+|+++++++.|+.+++||++
T Consensus       136 ~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~R  197 (568)
T PTZ00420        136 MNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPR  197 (568)
T ss_pred             CCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECC
Confidence            98764 68899999999999998877444567889999999999999999999999999985

>KOG0286|consensus

Probab=99.95  E-value=4.3e-26  Score=133.01  Aligned_cols=127  Identities=22%  Similarity=0.336  Sum_probs=116.4

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc---ccceEEEEEccCCCEEEEe
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH---ESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~   77 (131)
                      ++||++.+.+.+.+ +|+..|++++|.|+|.-+++|+.|++.++||++..+...+..+   ...|.+++||..|++++.+
T Consensus       212 klWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfag  291 (343)
T KOG0286|consen  212 KLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAG  291 (343)
T ss_pred             eeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEee
Confidence            79999999999998 9999999999999999999999999999999998775333333   4578999999999999999


Q ss_pred             CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ..|.++.+||.-.++.. .+.+|..+|.++..+|+|.-+++|+.|.++++|.
T Consensus       292 y~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  292 YDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             ecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            99999999999989888 8889999999999999999999999999999994

>KOG0291|consensus

Probab=99.95  E-value=7e-26  Score=145.62  Aligned_cols=128  Identities=24%  Similarity=0.381  Sum_probs=112.3

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      -+|+.++..-+... +|...+.+++++|||+.+++|+.|++|++||..++-+ .++..|.+.|..+.|+..|+.+++++-
T Consensus       333 lVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSL  412 (893)
T KOG0291|consen  333 LVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSL  412 (893)
T ss_pred             EEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeec
Confidence            57887766555444 8999999999999999999999999999999998876 678899999999999999999999999


Q ss_pred             CCeEEEeeCC--------------------------------------------CCceE-EecCCCCCeEEEEECCCCCE
Q psy15612         80 DNLLNAWRTP--------------------------------------------YGASI-FQSKESSSVLSCDISADDKY  114 (131)
Q Consensus        80 ~~~i~~w~~~--------------------------------------------~~~~~-~~~~~~~~v~~~~~~~~~~~  114 (131)
                      ||+++.||+.                                            +|+.+ .+.+|.++|.+++|+|.+..
T Consensus       413 DGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~  492 (893)
T KOG0291|consen  413 DGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSL  492 (893)
T ss_pred             CCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCe
Confidence            9998888843                                            44444 44589999999999999999


Q ss_pred             EEEecCCCcEEEEEe
Q psy15612        115 IVTGSGDKKATVYEV  129 (131)
Q Consensus       115 l~~~~~d~~i~vw~~  129 (131)
                      |++++.|.+|++||+
T Consensus       493 LaS~SWDkTVRiW~i  507 (893)
T KOG0291|consen  493 LASGSWDKTVRIWDI  507 (893)
T ss_pred             EEeccccceEEEEEe
Confidence            999999999999997

>KOG0645|consensus

Probab=99.95  E-value=2.1e-25  Score=128.99  Aligned_cols=129  Identities=17%  Similarity=0.247  Sum_probs=112.9

Q ss_pred             CEEEeCCCC---ceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCC
Q psy15612          1 MYLQSVSPG---RQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~---~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~   72 (131)
                      ||+|++..+   .+...+  +|...|.+++|+|.|++|++++.|.++.+|.-..++.   ..+.+|+.+|.+++|+++|+
T Consensus        39 vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~  118 (312)
T KOG0645|consen   39 VRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGN  118 (312)
T ss_pred             EEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCC
Confidence            689998743   334444  6889999999999999999999999999999876652   56789999999999999999


Q ss_pred             EEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         73 WFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +|+++++|+.+.+|....+...    .+.+|.+.|..+.|+|...+|++++.|.+|++|+-
T Consensus       119 ~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~  179 (312)
T KOG0645|consen  119 YLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRD  179 (312)
T ss_pred             EEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEee
Confidence            9999999999999998754432    77889999999999999999999999999999963

>KOG0315|consensus

Probab=99.95  E-value=1.1e-25  Score=129.02  Aligned_cols=130  Identities=18%  Similarity=0.248  Sum_probs=113.9

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE---------------------------
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY---------------------------   53 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~---------------------------   53 (131)
                      +||||++...+.+.+.+..+|+++..+|+...|+++..+|.|++||+....+.                           
T Consensus       107 ~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~n  186 (311)
T KOG0315|consen  107 VKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAAN  186 (311)
T ss_pred             EEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEec
Confidence            58999999888888899999999999999999999999999999998754210                           


Q ss_pred             -----------------------EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC-ceE-EecCCCCCeEEEEE
Q psy15612         54 -----------------------QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG-ASI-FQSKESSSVLSCDI  108 (131)
Q Consensus        54 -----------------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~-~~~-~~~~~~~~v~~~~~  108 (131)
                                             +++.|.+.+..+.+|||++++++++.|.+++||+..+- +.. .+.+|...+...+|
T Consensus       187 nkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~F  266 (311)
T KOG0315|consen  187 NKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAF  266 (311)
T ss_pred             CCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeee
Confidence                                   24467888999999999999999999999999999876 222 66778899999999


Q ss_pred             CCCCCEEEEecCCCcEEEEEee
Q psy15612        109 SADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       109 ~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |.+|+||++++.|+.+++|++.
T Consensus       267 S~dg~YlvTassd~~~rlW~~~  288 (311)
T KOG0315|consen  267 SADGEYLVTASSDHTARLWDLS  288 (311)
T ss_pred             ccCccEEEecCCCCceeecccc
Confidence            9999999999999999999974

>KOG0295|consensus

Probab=99.94  E-value=1.2e-25  Score=134.31  Aligned_cols=130  Identities=18%  Similarity=0.233  Sum_probs=118.7

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccC--------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAAC--------   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~--------   70 (131)
                      |+.|+..++.++.++ +|.+.|..++.+.||..+++++.|.++++|-+.+..+ ..+..|+..+.+++|.|.        
T Consensus       217 ik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~  296 (406)
T KOG0295|consen  217 IKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISE  296 (406)
T ss_pred             eeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhh
Confidence            589999999999999 8999999999999999999999999999999998876 445678888999998752        


Q ss_pred             -------CCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         71 -------GKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        71 -------~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                             ++.+.++++|++|++||+.+|.++ .+.+|...|..++|+|.|+||++..+|+++++||++
T Consensus       297 at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~  364 (406)
T KOG0295|consen  297 ATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLK  364 (406)
T ss_pred             ccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEec
Confidence                   257889999999999999999999 788899999999999999999999999999999985

>PTZ00421 coronin; Provisional

Probab=99.94  E-value=5.1e-25  Score=140.92  Aligned_cols=115  Identities=19%  Similarity=0.254  Sum_probs=103.5

Q ss_pred             cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC--------eEEeeccccceEEEEEccCC-CEEEEeCCCCeEEE
Q psy15612         16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD--------KYQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNA   85 (131)
Q Consensus        16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~   85 (131)
                      +|.+.|.+++|+| +++.|++++.|++|++||+....        ...+.+|...|.+++|+|++ +.+++++.|+.|++
T Consensus        73 GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrI  152 (493)
T PTZ00421         73 GQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNV  152 (493)
T ss_pred             CCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEE
Confidence            7899999999999 88899999999999999997542        34567899999999999985 68999999999999


Q ss_pred             eeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         86 WRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        86 w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ||+.+++.. ....|...|.+++|+|+++++++++.|++|++||++
T Consensus       153 WDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~r  198 (493)
T PTZ00421        153 WDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPR  198 (493)
T ss_pred             EECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECC
Confidence            999998877 556788999999999999999999999999999975

>KOG0284|consensus

Probab=99.94  E-value=8.2e-27  Score=140.97  Aligned_cols=130  Identities=17%  Similarity=0.289  Sum_probs=115.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++|+.......... .|.+.|.+++|+|....+++++.|+.+++||....+. ..+.+|...|.+++|+|....+++++
T Consensus       162 iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgs  241 (464)
T KOG0284|consen  162 IKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGS  241 (464)
T ss_pred             EEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEcc
Confidence            567776544333333 4558999999999999999999999999999987764 66789999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||.++|+++ .+..|...|..+.|+|++++|++++.|..++++|++
T Consensus       242 kDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR  294 (464)
T KOG0284|consen  242 KDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR  294 (464)
T ss_pred             CCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehh
Confidence            9999999999999999 788899999999999999999999999999999987

>KOG0292|consensus

Probab=99.94  E-value=6.2e-26  Score=148.26  Aligned_cols=129  Identities=16%  Similarity=0.295  Sum_probs=123.9

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||-+-+.++..+ +|.++|..+.|+|++.++++|+.|..|++|+..+.++ .++.+|-..|..+.|++.-++|+++|
T Consensus        33 IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSAS  112 (1202)
T KOG0292|consen   33 IQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSAS  112 (1202)
T ss_pred             eeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEcc
Confidence            689999999999888 9999999999999999999999999999999998886 67899999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .|-+|+||++++++++ .+.+|..-|.|..|+|....++++|-|.+|+|||+
T Consensus       113 DDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDi  164 (1202)
T KOG0292|consen  113 DDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDI  164 (1202)
T ss_pred             CCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEee
Confidence            9999999999999999 88999999999999999999999999999999997

>KOG0273|consensus

Probab=99.94  E-value=4.8e-25  Score=135.37  Aligned_cols=130  Identities=18%  Similarity=0.351  Sum_probs=115.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC-------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG-------   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-------   71 (131)
                      |+++-+...++..++ +|.++|.++.|+|.+.+|++++.|+++++|....... ..+..|...|+.+.|+|.|       
T Consensus       341 i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~  420 (524)
T KOG0273|consen  341 IHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPN  420 (524)
T ss_pred             EEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCc
Confidence            355666666777777 8999999999999999999999999999999876654 6688999999999999864       


Q ss_pred             --CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         72 --KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 --~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                        ..+++++.|+++++||+..+.++ .+..|..+|.+++|+|+|+++++|+.|+.|.+|+.+
T Consensus       421 ~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~  482 (524)
T KOG0273|consen  421 MNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK  482 (524)
T ss_pred             CCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc
Confidence              45889999999999999999999 666899999999999999999999999999999875

>KOG0278|consensus

Probab=99.93  E-value=1.2e-24  Score=125.03  Aligned_cols=129  Identities=20%  Similarity=0.252  Sum_probs=115.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      ||+||.++++.++.+..+..|.++.++++|++|.++ ..+.|.+||..+....+....+..|.+..++|+...+++|+.|
T Consensus       167 VRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged  245 (334)
T KOG0278|consen  167 VRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGED  245 (334)
T ss_pred             eEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCccccccccccCCCceEEecCcc
Confidence            699999999999999999999999999999987665 4567999999988765555556678889999999999999999


Q ss_pred             CeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         81 NLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        81 ~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..++.||..+++.+  +.++|.++|.|+.|+|+|...++|+.||+|++|...
T Consensus       246 ~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~  297 (334)
T KOG0278|consen  246 FKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT  297 (334)
T ss_pred             eEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence            99999999999998  458899999999999999999999999999999863

>PTZ00421 coronin; Provisional

Probab=99.93  E-value=8.5e-24  Score=135.40  Aligned_cols=130  Identities=15%  Similarity=0.194  Sum_probs=107.5

Q ss_pred             CEEEeCCCCc-------eeeee-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccC
Q psy15612          1 MYLQSVSPGR-------QLQQH-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~~-------~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~   70 (131)
                      |++||+.++.       .+..+ +|...|.+++|+|++ ..|++++.|+.|++||+.++.. ..+..|...|.+++|+|+
T Consensus       100 IkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spd  179 (493)
T PTZ00421        100 IMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLD  179 (493)
T ss_pred             EEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECC
Confidence            6899997652       34445 799999999999985 6899999999999999998775 556778899999999999


Q ss_pred             CCEEEEeCCCCeEEEeeCCCCceE-EecCCCCC-eEEEEECCCCCEEEEec----CCCcEEEEEee
Q psy15612         71 GKWFVSTGKDNLLNAWRTPYGASI-FQSKESSS-VLSCDISADDKYIVTGS----GDKKATVYEVI  130 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~-v~~~~~~~~~~~l~~~~----~d~~i~vw~~~  130 (131)
                      |+.+++++.|+.+++||+++++.+ ....|.+. ...+.|.+++..+++++    .|+.|++||++
T Consensus       180 G~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr  245 (493)
T PTZ00421        180 GSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTR  245 (493)
T ss_pred             CCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCC
Confidence            999999999999999999998877 44556543 45778898877776543    47899999985

>KOG0282|consensus

Probab=99.92  E-value=4.9e-25  Score=135.49  Aligned_cols=130  Identities=12%  Similarity=0.200  Sum_probs=118.2

Q ss_pred             CEEEeCCC-Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCC-CEEEEe
Q psy15612          1 MYLQSVSP-GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACG-KWFVST   77 (131)
Q Consensus         1 i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~   77 (131)
                      |+||++.. +++++++ +|..+|.+++|+++|..+++++.|..+++||.+++++.........+.++.|+|++ +.+++|
T Consensus       239 vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G  318 (503)
T KOG0282|consen  239 VKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVG  318 (503)
T ss_pred             EEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEe
Confidence            68999986 8888888 99999999999999999999999999999999999986655566778999999998 778899


Q ss_pred             CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|+.|+.||+++++.+ ....|-+.+..+.|-++|+.+++++.|+.+++|+.+
T Consensus       319 ~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~  372 (503)
T KOG0282|consen  319 GSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENR  372 (503)
T ss_pred             cCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcC
Confidence            99999999999999977 455678999999999999999999999999999865

>KOG0284|consensus

Probab=99.92  E-value=6.6e-25  Score=132.83  Aligned_cols=129  Identities=16%  Similarity=0.240  Sum_probs=117.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |+|||....+....+ +|.-.|.+++|+|....+++++.|..|++||.+++.+ ..+..|+..|..+.|+|++++|++++
T Consensus       204 ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~s  283 (464)
T KOG0284|consen  204 IKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGS  283 (464)
T ss_pred             EEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEcc
Confidence            689999988887777 8999999999999999999999999999999999886 77889999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~  129 (131)
                      +|..++++|+++-+.+ ...+|...+.++.|+|- ..+|.+|+.||.+..|.+
T Consensus       284 kD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v  336 (464)
T KOG0284|consen  284 KDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVV  336 (464)
T ss_pred             CCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEec
Confidence            9999999999976666 66779999999999995 457788899999999975

>KOG0319|consensus

Probab=99.92  E-value=1e-23  Score=135.25  Aligned_cols=128  Identities=19%  Similarity=0.268  Sum_probs=121.3

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      .+||++++.+...++ +|...|.++.|+|..+.+++++.|.+|++|.+.+..+ .++.+|...|..+.|-.+|+.+++++
T Consensus       487 aKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~  566 (775)
T KOG0319|consen  487 AKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAG  566 (775)
T ss_pred             eeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEecc
Confidence            379999988888888 9999999999999999999999999999999999987 67889999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      .||.+++|++.++++. .+..|..+|+.++.+|....+++|+.|+.|.+|.
T Consensus       567 adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk  617 (775)
T KOG0319|consen  567 ADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK  617 (775)
T ss_pred             CCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEee
Confidence            9999999999999998 7788999999999999999999999999999994

>KOG0273|consensus

Probab=99.92  E-value=2.6e-23  Score=127.91  Aligned_cols=131  Identities=18%  Similarity=0.279  Sum_probs=119.1

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCC---------EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE---------WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~---------~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~   69 (131)
                      ++||++........+ .|...|+.+.|+|.|.         .+++++.|++|++||+..+.+ ..+..|..+|++++|+|
T Consensus       383 lkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~  462 (524)
T KOG0273|consen  383 LKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSP  462 (524)
T ss_pred             eEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecC
Confidence            589998888888777 8999999999999644         588999999999999998886 67789999999999999


Q ss_pred             CCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         70 CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        70 ~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      +|+++++|+.|+.+.+|+.++++........+.|..++|+.+|.++.....|+.+.+.|+|+
T Consensus       463 ~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr~  524 (524)
T KOG0273|consen  463 NGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLDLRK  524 (524)
T ss_pred             CCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEEecC
Confidence            99999999999999999999999987767778899999999999998888899999999986

>KOG0289|consensus

Probab=99.92  E-value=2.5e-23  Score=126.99  Aligned_cols=130  Identities=14%  Similarity=0.206  Sum_probs=114.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccc---cceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHE---SCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~   76 (131)
                      |++|......+.... .|.++|+.+..+|.|.++++++.|+...+.|++++.......++   -.+.+.+|+|||..|.+
T Consensus       285 i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgt  364 (506)
T KOG0289|consen  285 IRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGT  364 (506)
T ss_pred             EEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEec
Confidence            578888766555444 89999999999999999999999999999999998865443332   35889999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +..|+.+++||+.++... ...+|.++|..++|+.+|-+|++++.|+.|++||+|
T Consensus       365 gt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLR  419 (506)
T KOG0289|consen  365 GTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLR  419 (506)
T ss_pred             cCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEeh
Confidence            999999999999988877 667799999999999999999999999999999997

>KOG0276|consensus

Probab=99.92  E-value=6.9e-24  Score=134.49  Aligned_cols=129  Identities=15%  Similarity=0.205  Sum_probs=116.4

Q ss_pred             CEEEeCCCCc-eeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc--CCCEE
Q psy15612          1 MYLQSVSPGR-QLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA--CGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~-~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~--~~~~~   74 (131)
                      |++||.+.+- +.+++ +|..-|++++|+| |.+.+++++-|++|++|.+.+... .++.+|...|.++.+-+  |.+++
T Consensus       121 iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpyl  200 (794)
T KOG0276|consen  121 IKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYL  200 (794)
T ss_pred             EEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceE
Confidence            6899998654 44556 8999999999999 577899999999999999998876 77899999999999987  45799


Q ss_pred             EEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         75 VSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++++.|..+++||.++..++ .+.+|...|..+.|+|.=..+++|++||++++|+-
T Consensus       201 IsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs  256 (794)
T KOG0276|consen  201 ISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNS  256 (794)
T ss_pred             EecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecC
Confidence            99999999999999999998 78889999999999999999999999999999974

>KOG0291|consensus

Probab=99.92  E-value=1.8e-23  Score=134.74  Aligned_cols=130  Identities=17%  Similarity=0.210  Sum_probs=114.9

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-E-------------------------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-Y-------------------------   53 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~-------------------------   53 (131)
                      |++||...+-|..++ +|+..|..+.|+..|+.+++.+.||+|+.||+...+. +                         
T Consensus       374 VKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG  453 (893)
T KOG0291|consen  374 VKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAG  453 (893)
T ss_pred             EEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEee
Confidence            689999999999999 9999999999999999999999999999999864431 0                         


Q ss_pred             -------------------EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCC
Q psy15612         54 -------------------QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDK  113 (131)
Q Consensus        54 -------------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~  113 (131)
                                         .+.+|+++|.++.|+|+++.++++++|++|++||+-..... ........+..++|+|+|+
T Consensus       454 ~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~  533 (893)
T KOG0291|consen  454 AQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGK  533 (893)
T ss_pred             ccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCC
Confidence                               13479999999999999999999999999999999765444 4556778899999999999


Q ss_pred             EEEEecCCCcEEEEEee
Q psy15612        114 YIVTGSGDKKATVYEVI  130 (131)
Q Consensus       114 ~l~~~~~d~~i~vw~~~  130 (131)
                      .++++.-||.|.+||+.
T Consensus       534 elaVaTldgqItf~d~~  550 (893)
T KOG0291|consen  534 ELAVATLDGQITFFDIK  550 (893)
T ss_pred             eEEEEEecceEEEEEhh
Confidence            99999999999999974

>PTZ00420 coronin; Provisional

Probab=99.92  E-value=1.4e-22  Score=130.94  Aligned_cols=130  Identities=9%  Similarity=0.066  Sum_probs=102.7

Q ss_pred             CEEEeCCCCc--------eeeee-cCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccC
Q psy15612          1 MYLQSVSPGR--------QLQQH-DFSSQIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~~--------~~~~~-~~~~~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~   70 (131)
                      |++||+.++.        .+..+ +|...|.+++|+|++.. +++++.|+.|++||++++.......+...+.+++|+|+
T Consensus        99 IrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~Slswspd  178 (568)
T PTZ00420         99 IRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIK  178 (568)
T ss_pred             EEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCC
Confidence            6899997642        22334 78899999999999876 46889999999999998875332335678999999999


Q ss_pred             CCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeE-----EEEECCCCCEEEEecCC----CcEEEEEee
Q psy15612         71 GKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVL-----SCDISADDKYIVTGSGD----KKATVYEVI  130 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~-----~~~~~~~~~~l~~~~~d----~~i~vw~~~  130 (131)
                      |+.+++++.|+.+++||+++++.+ ...+|.+.+.     ...|++++.++++++.|    ++|++||++
T Consensus       179 G~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr  248 (568)
T PTZ00420        179 GNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLK  248 (568)
T ss_pred             CCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECC
Confidence            999999999999999999998877 4556765543     23456888888887765    479999986

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=1.2e-22  Score=137.16  Aligned_cols=129  Identities=12%  Similarity=0.201  Sum_probs=110.3

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEc-cCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA-ACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~   77 (131)
                      |++||+.+++.+..+ +|.+.|.+++|+| ++..|++++.|+.+++||+.++.......+...+.++.|+ +++..++++
T Consensus       557 v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latg  636 (793)
T PLN00181        557 VQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFG  636 (793)
T ss_pred             EEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEE
Confidence            589999999888777 8999999999997 7889999999999999999887753332344678999995 579999999


Q ss_pred             CCCCeEEEeeCCCCce-E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGAS-I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|+.|++||+++++. . ...+|...|.++.|. ++.++++++.|++|++||++
T Consensus       637 s~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~  690 (793)
T PLN00181        637 SADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLS  690 (793)
T ss_pred             eCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCC
Confidence            9999999999987653 3 556789999999997 67889999999999999974

>KOG0295|consensus

Probab=99.91  E-value=4e-23  Score=123.65  Aligned_cols=129  Identities=20%  Similarity=0.336  Sum_probs=117.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCC---------------CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS---------------GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVL   63 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~---------------~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~   63 (131)
                      |++|-+.++++...+ +|+.+|.+++|.|.               ++.+.+++.|+++++||+.++.+ .++.+|...|.
T Consensus       259 l~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr  338 (406)
T KOG0295|consen  259 LRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVR  338 (406)
T ss_pred             EEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceee
Confidence            578999988888777 88999999999662               25789999999999999999986 78899999999


Q ss_pred             EEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         64 SLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .++|+|.|++|+++..|+++++||+++++++ ....|...+.+++|+.+..++++|+-|.++++|.-
T Consensus       339 ~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  339 GVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             eeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence            9999999999999999999999999999998 66689999999999999999999999999999974

>KOG0319|consensus

Probab=99.91  E-value=2.4e-23  Score=133.57  Aligned_cols=130  Identities=12%  Similarity=0.227  Sum_probs=115.8

Q ss_pred             CEEEeCCCCc----eeee------ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc
Q psy15612          1 MYLQSVSPGR----QLQQ------HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~----~~~~------~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~   69 (131)
                      |++|++...+    ++..      ..|...|++++++|+.+++++|+.|.+.++|+++.... ..+.+|...+.++.|+|
T Consensus       436 lK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~  515 (775)
T KOG0319|consen  436 LKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSK  515 (775)
T ss_pred             EEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEecc
Confidence            5789886521    1111      15889999999999999999999999999999996665 67899999999999999


Q ss_pred             CCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         70 CGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 ~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..+.++++|.|.+++||.+.+..++ ...+|...|...+|-.+|+.|++++.||.+++|++.
T Consensus       516 ~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnik  577 (775)
T KOG0319|consen  516 NDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIK  577 (775)
T ss_pred             ccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEecc
Confidence            9999999999999999999999999 777899999999999999999999999999999973

>KOG0269|consensus

Probab=99.91  E-value=1e-23  Score=135.90  Aligned_cols=130  Identities=13%  Similarity=0.268  Sum_probs=111.2

Q ss_pred             CEEEeCCC---Cceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc-CCCE
Q psy15612          1 MYLQSVSP---GRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA-CGKW   73 (131)
Q Consensus         1 i~iwd~~~---~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~   73 (131)
                      |-+||+..   .+.+..+ +|...+..+.|++. ...|++|+.|+.|++||++...- ..+.+....|++++|+| .+..
T Consensus       112 i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~  191 (839)
T KOG0269|consen  112 ISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNK  191 (839)
T ss_pred             EEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCce
Confidence            46899976   3444455 89999999999985 55788999999999999987764 45566778899999999 5778


Q ss_pred             EEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+++...|.+++||++.....  .+..|.+.|.++.|+|++.+|++|+.|+.++|||..
T Consensus       192 F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t  250 (839)
T KOG0269|consen  192 FASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMT  250 (839)
T ss_pred             EEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEecc
Confidence            999999999999999977655  677899999999999999999999999999999963

>KOG0265|consensus

Probab=99.91  E-value=6.7e-23  Score=120.11  Aligned_cols=115  Identities=21%  Similarity=0.346  Sum_probs=102.7

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~   93 (131)
                      +|++.|+.+.|+|+|..+++++.|..|.+|+.....  .-.+.+|.+.|..+.|.+|++.+++++.|.+++.||.++|+.
T Consensus        45 gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~  124 (338)
T KOG0265|consen   45 GHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKR  124 (338)
T ss_pred             CCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEeccccee
Confidence            799999999999999999999999999999986554  355679999999999999999999999999999999999999


Q ss_pred             E-EecCCCCCeEEEEECCCCCE-EEEecCCCcEEEEEee
Q psy15612         94 I-FQSKESSSVLSCDISADDKY-IVTGSGDKKATVYEVI  130 (131)
Q Consensus        94 ~-~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~~  130 (131)
                      . ....|...+..+.-+.-|.. +.+++.|+++++||+|
T Consensus       125 ~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R  163 (338)
T KOG0265|consen  125 IRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR  163 (338)
T ss_pred             eehhccccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence            8 67789999998886555554 5678889999999997

>KOG0277|consensus

Probab=99.91  E-value=7e-23  Score=117.89  Aligned_cols=130  Identities=16%  Similarity=0.359  Sum_probs=110.6

Q ss_pred             CEEEeCCC-Cceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEcc-CCCEEE
Q psy15612          1 MYLQSVSP-GRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAA-CGKWFV   75 (131)
Q Consensus         1 i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~   75 (131)
                      +++||+.. ..++..+ +|..+|.++.|++. ++.+++++.|++|++|+...+. +.++.+|...|+..+|+| .++.++
T Consensus        85 Lrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfa  164 (311)
T KOG0277|consen   85 LRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFA  164 (311)
T ss_pred             EEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEE
Confidence            58999653 4566666 89999999999985 5567778999999999987655 688899999999999999 477899


Q ss_pred             EeCCCCeEEEeeCCC-CceEEecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDNLLNAWRTPY-GASIFQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.|+.+++||++. |+.+....|...+.++.|+. +.+.+++++.|+.|+.||+|
T Consensus       165 s~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir  221 (311)
T KOG0277|consen  165 SASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIR  221 (311)
T ss_pred             EccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehh
Confidence            999999999999975 55667777889999999997 56678999999999999997

>KOG0282|consensus

Probab=99.91  E-value=4.5e-23  Score=126.99  Aligned_cols=130  Identities=16%  Similarity=0.303  Sum_probs=111.6

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++|+++..+.....+.++.|+|++ +.+++|+.|+.|+.||++++++ +....|-+.+..+.|-++|+.+++++
T Consensus       282 lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissS  361 (503)
T KOG0282|consen  282 LKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSS  361 (503)
T ss_pred             eeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeec
Confidence            689999999999999888899999999998 7788999999999999999986 56677889999999999999999999


Q ss_pred             CCCeEEEeeCCCCceEEec-----------------------------------------------CC--CCCeEEEEEC
Q psy15612         79 KDNLLNAWRTPYGASIFQS-----------------------------------------------KE--SSSVLSCDIS  109 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~-----------------------------------------------~~--~~~v~~~~~~  109 (131)
                      .|+.+++|+.+.+..+...                                               +|  .+--..+.||
T Consensus       362 Ddks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fS  441 (503)
T KOG0282|consen  362 DDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFS  441 (503)
T ss_pred             cCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEc
Confidence            9999999996644332000                                               11  2445688999


Q ss_pred             CCCCEEEEecCCCcEEEEEee
Q psy15612        110 ADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       110 ~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |||++|++|+.||.+.+||.+
T Consensus       442 pDG~~l~SGdsdG~v~~wdwk  462 (503)
T KOG0282|consen  442 PDGRTLCSGDSDGKVNFWDWK  462 (503)
T ss_pred             CCCCeEEeecCCccEEEeech
Confidence            999999999999999999964

>KOG0277|consensus

Probab=99.90  E-value=6.6e-23  Score=117.98  Aligned_cols=130  Identities=15%  Similarity=0.226  Sum_probs=113.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEcc-CCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAA-CGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~~~   76 (131)
                      |++||..-++.+.++ +|+..|+...|+|. +..+++++.|+.+++||++..- ...+..|..++.++.|+. +.+.+++
T Consensus       129 iKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~T  208 (311)
T KOG0277|consen  129 IKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLAT  208 (311)
T ss_pred             eEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEe
Confidence            689999888888888 99999999999995 7788999999999999997543 455888999999999998 5667889


Q ss_pred             eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.|+.|+.||+++-+..  .+.+|+-.|..+.|||.. ..|++++.|-++++||..
T Consensus       209 g~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~  265 (311)
T KOG0277|consen  209 GGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPE  265 (311)
T ss_pred             cCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccc
Confidence            999999999999986655  677899999999999964 578899999999999863

>KOG0296|consensus

Probab=99.90  E-value=6.7e-22  Score=118.47  Aligned_cols=129  Identities=19%  Similarity=0.259  Sum_probs=115.6

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      .+|++.+++....+ +|...|.++.|+.+|.+|++|+.+|.|.+|+..++.. ..+...-..+.=+.|+|.+..++.|+.
T Consensus        89 flW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~  168 (399)
T KOG0296|consen   89 FLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGST  168 (399)
T ss_pred             EEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecC
Confidence            58999999977777 9999999999999999999999999999999998875 445545567788999999999999999


Q ss_pred             CCeEEEeeCCCCce-EEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGAS-IFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.+.+|.+.++.. ....+|..++.+-.|.|+|+.++++..|++|++||+.
T Consensus       169 DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~k  220 (399)
T KOG0296|consen  169 DGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPK  220 (399)
T ss_pred             CCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecC
Confidence            99999999998544 4778899999999999999999999999999999973

>KOG0318|consensus

Probab=99.90  E-value=6.9e-22  Score=123.21  Aligned_cols=123  Identities=20%  Similarity=0.335  Sum_probs=107.6

Q ss_pred             CCceeeee-cCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEE
Q psy15612          8 PGRQLQQH-DFSSQIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLN   84 (131)
Q Consensus         8 ~~~~~~~~-~~~~~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~   84 (131)
                      +|..+..+ +|...|+++.|-|...+ +++++.|+.+.+|+-...+. ..+..|...|.+++|+|||..+++++.|+++.
T Consensus       136 SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~  215 (603)
T KOG0318|consen  136 SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIY  215 (603)
T ss_pred             CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEE
Confidence            45555555 89999999999998774 78999999999998766664 45667888999999999999999999999999


Q ss_pred             EeeCCCCceE-Eec---CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         85 AWRTPYGASI-FQS---KESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        85 ~w~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +||-.+|+.+ .+.   +|.+.|..++|+||++.+++++.|.++++||+.
T Consensus       216 iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs  265 (603)
T KOG0318|consen  216 IYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVS  265 (603)
T ss_pred             EEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEee
Confidence            9999999988 443   699999999999999999999999999999974

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.90  E-value=1e-21  Score=117.81  Aligned_cols=128  Identities=22%  Similarity=0.336  Sum_probs=112.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ .+...+.++.|+|+++.+++++.++.+.+||+...+. ..+..|...+.++.|+|++.++++++
T Consensus       159 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  238 (289)
T cd00200         159 IKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGS  238 (289)
T ss_pred             EEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEc
Confidence            579999988887777 6777999999999999999998899999999987765 44447888999999999988888888


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      .++.+++|+..+++.. ....+...+.+++|+|+++++++++.|+.+++|+
T Consensus       239 ~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         239 EDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             CCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            8999999999987776 4557888999999999999999999999999996

>KOG0265|consensus

Probab=99.90  E-value=1.6e-22  Score=118.56  Aligned_cols=131  Identities=15%  Similarity=0.262  Sum_probs=116.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |+.||+++|+++..+ .|..-|+++.-+.-|. ++.+++.|+++++||+++....+....+-++..+.|...+..+.+++
T Consensus       114 v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sgg  193 (338)
T KOG0265|consen  114 VRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGG  193 (338)
T ss_pred             EEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeecc
Confidence            578999999999888 8889999998544444 56778999999999999888655555677899999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      -|+.|++||++....+ .+.+|.+.|..+..+|+|.++.+-+.|.++++||+++
T Consensus       194 Idn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp  247 (338)
T KOG0265|consen  194 IDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP  247 (338)
T ss_pred             ccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecc
Confidence            9999999999988888 7889999999999999999999999999999999984

>KOG0281|consensus

Probab=99.90  E-value=2.5e-23  Score=124.63  Aligned_cols=123  Identities=24%  Similarity=0.383  Sum_probs=108.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||..+-++...+ +|.+.|.++.|  +.+.+++|+.|.+|++||..++++ ..+..|...|..+.|+  ..++++++
T Consensus       219 ikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcS  294 (499)
T KOG0281|consen  219 IKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCS  294 (499)
T ss_pred             eEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEec
Confidence            689999999998887 99999999998  567999999999999999999986 6678899999999997  56899999


Q ss_pred             CCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .|..+.+||+......    .+.+|...|..+.|+  .+++++++.|+++++|+.
T Consensus       295 kDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~  347 (499)
T KOG0281|consen  295 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWST  347 (499)
T ss_pred             CCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEec
Confidence            9999999999876644    567899999999884  569999999999999986

>KOG0645|consensus

Probab=99.90  E-value=2.9e-21  Score=112.00  Aligned_cols=128  Identities=14%  Similarity=0.170  Sum_probs=109.1

Q ss_pred             EEeCCC--Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---e-EEeeccccceEEEEEccCCCEEE
Q psy15612          3 LQSVSP--GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---K-YQLHLHESCVLSLRFAACGKWFV   75 (131)
Q Consensus         3 iwd~~~--~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~-~~~~~~~~~v~~~~~~~~~~~~~   75 (131)
                      ||.-..  .+++..+ +|+.+|.+++|+++|.+|++++.|..|-+|.+....   + ..++.|...|..+.|+|....|+
T Consensus        87 Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~  166 (312)
T KOG0645|consen   87 IWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLF  166 (312)
T ss_pred             EeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeE
Confidence            454443  3566667 899999999999999999999999999999997554   2 45688999999999999999999


Q ss_pred             EeCCCCeEEEeeCC-CCc--eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDNLLNAWRTP-YGA--SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~-~~~--~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.|++|++|.-. ...  +. .+.+|...|.+++|++.|..|++++.|++++||...
T Consensus       167 S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~  225 (312)
T KOG0645|consen  167 SCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY  225 (312)
T ss_pred             EeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeec
Confidence            99999999999766 333  23 667788899999999999999999999999999753

>KOG0313|consensus

Probab=99.90  E-value=1.8e-22  Score=121.43  Aligned_cols=127  Identities=20%  Similarity=0.310  Sum_probs=113.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccC-CCEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAAC-GKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~-~~~~~   75 (131)
                      |+.||+++++....+..+....++..+|..++|++|+.|..+++||.+++.    ..++.+|.+.|..+.|+|. ...|+
T Consensus       283 Ik~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~  362 (423)
T KOG0313|consen  283 IKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLV  362 (423)
T ss_pred             EEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEE
Confidence            689999999999988888899999999999999999999999999998765    3678899999999999995 55688


Q ss_pred             EeCCCCeEEEeeCCCCc-eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         76 STGKDNLLNAWRTPYGA-SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~-~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +++.|+++++||+++.+ ++ -..+|...|.++.|+ ++.++++|+.|.+++++.
T Consensus       363 S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~  416 (423)
T KOG0313|consen  363 SGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFK  416 (423)
T ss_pred             EEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEec
Confidence            99999999999999877 55 667899999999997 456799999999999975

>KOG0285|consensus

Probab=99.90  E-value=1.2e-22  Score=121.90  Aligned_cols=115  Identities=20%  Similarity=0.340  Sum_probs=109.1

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +|.+.|.++++.|...++++|+.|+++.|||+.++++ ..+.+|...+..+++|+.-.++++++.|+.++.||+...+.+
T Consensus       149 gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvI  228 (460)
T KOG0285|consen  149 GHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVI  228 (460)
T ss_pred             hccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhH
Confidence            7999999999999999999999999999999999997 678899999999999999999999999999999999988877


Q ss_pred             -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                       ...+|-+.|.+++.+|.-..+++++.|..++|||+|
T Consensus       229 R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiR  265 (460)
T KOG0285|consen  229 RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR  265 (460)
T ss_pred             HHhccccceeEEEeccccceeEEecCCcceEEEeeec
Confidence             667899999999999999999999999999999986

>KOG0316|consensus

Probab=99.90  E-value=4.1e-22  Score=113.84  Aligned_cols=128  Identities=16%  Similarity=0.185  Sum_probs=105.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++|+...+.+++++ +|..+|..++.+.|...+++++.|..+.+||..+++. +++.+|.+.|..++|+++...+++++
T Consensus        41 vrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~Sgs  120 (307)
T KOG0316|consen   41 VRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGS  120 (307)
T ss_pred             EEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEecc
Confidence            689999999999999 8999999999999999999999999999999999986 78899999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|..+++||.++....   .+......|.++..+  +..+++|+.||+++.||+|
T Consensus       121 fD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR  173 (307)
T KOG0316|consen  121 FDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIR  173 (307)
T ss_pred             ccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEee
Confidence            9999999998865432   333344555555542  3445566666666666654

>KOG0275|consensus

Probab=99.90  E-value=8.7e-24  Score=125.81  Aligned_cols=129  Identities=16%  Similarity=0.220  Sum_probs=117.2

Q ss_pred             CEEEeCCCCceeeee---------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee-ccccceEEEEEcc
Q psy15612          1 MYLQSVSPGRQLQQH---------DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH-LHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~-~~~~~v~~~~~~~   69 (131)
                      |.+||..+|+..+.+         .+...|.++.|+.|..++++|+.||.+++|.+.++.+ +.+. .|...|.++.|+.
T Consensus       237 iEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSr  316 (508)
T KOG0275|consen  237 IEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSR  316 (508)
T ss_pred             eeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEcc
Confidence            468999888776543         3567899999999999999999999999999999997 4454 7999999999999


Q ss_pred             CCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         70 CGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        70 ~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |++.+++++.|.++++-.+.+|+.+ ...+|.+.|....|.++|..+++++.||++++|+.
T Consensus       317 D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~  377 (508)
T KOG0275|consen  317 DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHG  377 (508)
T ss_pred             CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecC
Confidence            9999999999999999999999998 77889999999999999999999999999999985

>KOG0276|consensus

Probab=99.90  E-value=6.9e-22  Score=125.59  Aligned_cols=130  Identities=15%  Similarity=0.225  Sum_probs=117.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEcc-CCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAA-CGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~~~~   76 (131)
                      ||+|+..+++.++.+ .|..-|.+++.+|...++++++.|.+|++|+.+..-  .+.+.+|...|.+++|+| |.+.+++
T Consensus        79 IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS  158 (794)
T KOG0276|consen   79 IRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFAS  158 (794)
T ss_pred             EEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceee
Confidence            689999999999999 899999999999999999999999999999997654  367899999999999999 6778999


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCC--CEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADD--KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~vw~~~  130 (131)
                      ++-|+++++|.+....+- .+.+|...|.|+.+-+.|  .++++|+.|.+++|||.+
T Consensus       159 ~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ  215 (794)
T KOG0276|consen  159 ASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQ  215 (794)
T ss_pred             eeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecc
Confidence            999999999999877766 677899999999997754  589999999999999975

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.90  E-value=4.8e-21  Score=114.85  Aligned_cols=130  Identities=19%  Similarity=0.311  Sum_probs=113.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++....+ .|...+.++.|+|++.++++++.++.+.+||+...+. ..+..|...+.++.|+|+++.+++++
T Consensus       117 i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  196 (289)
T cd00200         117 IKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSS  196 (289)
T ss_pred             EEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEec
Confidence            578999988877777 5888999999999999988888899999999986664 55667788999999999999999998


Q ss_pred             CCCeEEEeeCCCCceEE-ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASIF-QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .++.+.+||+.+++... ...+...+.+++|+|++.++++++.|+.+++||+.
T Consensus       197 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~  249 (289)
T cd00200         197 SDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR  249 (289)
T ss_pred             CCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcC
Confidence            89999999999888773 44788899999999998888888889999999974

>KOG0264|consensus

Probab=99.89  E-value=5e-22  Score=121.33  Aligned_cols=130  Identities=8%  Similarity=0.165  Sum_probs=106.3

Q ss_pred             CEEEeCCCCce-------eeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCC--CCe-EEeeccccceEEEEEc
Q psy15612          1 MYLQSVSPGRQ-------LQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALK--PDK-YQLHLHESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~~~~-------~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~--~~~-~~~~~~~~~v~~~~~~   68 (131)
                      |.+||+.....       ...+ +|...|..++|+|- ...+++++.|+.+.+||+++  .+. ....+|.+.+.|++|+
T Consensus       202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fn  281 (422)
T KOG0264|consen  202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFN  281 (422)
T ss_pred             EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeC
Confidence            57899864322       1223 89999999999995 55678899999999999995  333 4567899999999999


Q ss_pred             cC-CCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612         69 AC-GKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        69 ~~-~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~  130 (131)
                      |. +..|++++.|+++.+||+++-...  ...+|...|.++.|+|. .+.+++++.|+.+.|||+.
T Consensus       282 p~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls  347 (422)
T KOG0264|consen  282 PFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLS  347 (422)
T ss_pred             CCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecc
Confidence            95 567889999999999999976554  67789999999999996 4577888899999999983

>KOG0302|consensus

Probab=99.89  E-value=7.9e-22  Score=118.78  Aligned_cols=130  Identities=15%  Similarity=0.185  Sum_probs=106.8

Q ss_pred             CEEEeCCCCceee----eecCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccCCC
Q psy15612          1 MYLQSVSPGRQLQ----QHDFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~----~~~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~   72 (131)
                      |++|...++.-..    ..+|+..|-.++|||. ...+++|+.|+.|+|||++.+.   +.....|.+.|..+.|+.+..
T Consensus       236 I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~  315 (440)
T KOG0302|consen  236 IHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREP  315 (440)
T ss_pred             eEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcc
Confidence            4677766654321    2379999999999996 4578999999999999999874   344588999999999999888


Q ss_pred             EEEEeCCCCeEEEeeCCCC---ceE-EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612         73 WFVSTGKDNLLNAWRTPYG---ASI-FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~---~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|++|+.||.+++||++.-   +++ ..+.|..+|+++.|+|. ...+++++.|.+|.+||+.
T Consensus       316 lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDls  378 (440)
T KOG0302|consen  316 LLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLS  378 (440)
T ss_pred             eeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEee
Confidence            9999999999999999853   334 66779999999999996 4467788889999999985

>KOG0264|consensus

Probab=99.89  E-value=1.4e-21  Score=119.44  Aligned_cols=130  Identities=15%  Similarity=0.278  Sum_probs=106.1

Q ss_pred             CEEEeCCC--Cceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccC-CCE
Q psy15612          1 MYLQSVSP--GRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAAC-GKW   73 (131)
Q Consensus         1 i~iwd~~~--~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~-~~~   73 (131)
                      +.|||+++  .+..... .|.+.+.+++|+|- +..||+|+.|++|.+||++.-.  +..+.+|...|.++.|+|+ ...
T Consensus       252 L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etv  331 (422)
T KOG0264|consen  252 LMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETV  331 (422)
T ss_pred             EEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCce
Confidence            46999995  4444444 79999999999995 5678899999999999998655  4778999999999999996 557


Q ss_pred             EEEeCCCCeEEEeeCCC-Cc-------------eE-EecCCCCCeEEEEECCCCCE-EEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPY-GA-------------SI-FQSKESSSVLSCDISADDKY-IVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~-~~-------------~~-~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.+.+||+.. ++             .+ ...+|...|..++|+|+..+ +++.+.|+.+.||+..
T Consensus       332 LASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  332 LASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             eEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence            88899999999999752 11             12 34578999999999998775 5788889999999863

>KOG0281|consensus

Probab=99.89  E-value=1.3e-22  Score=121.63  Aligned_cols=123  Identities=17%  Similarity=0.351  Sum_probs=98.9

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~   75 (131)
                      |++||++++++++++ +|.+.|..+.|+  ..++++++.|.++.+||+....-    +.+.+|.+.|..+.|+  .++++
T Consensus       259 vrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIV  334 (499)
T KOG0281|consen  259 VRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIV  334 (499)
T ss_pred             EEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEE
Confidence            689999999999988 999999999996  56889999999999999986652    3456788888888885  55888


Q ss_pred             EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +++.|++|++|++.+++.+ .+.+|...|.|+.+  .++++++|+.|.+|++||+
T Consensus       335 sASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi  387 (499)
T KOG0281|consen  335 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI  387 (499)
T ss_pred             EecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEec
Confidence            8888888888888888777 66667777666655  4667777777777777775

>KOG0647|consensus

Probab=99.89  E-value=2.1e-21  Score=114.02  Aligned_cols=128  Identities=13%  Similarity=0.218  Sum_probs=111.2

Q ss_pred             CEEEeCCC-Cceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC--EEE
Q psy15612          1 MYLQSVSP-GRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK--WFV   75 (131)
Q Consensus         1 i~iwd~~~-~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~   75 (131)
                      ||+|+++. |..+...  .|+++|.+++|+.||..+++|+.|+.+++||+.+++..++..|.++|..+.|-+...  +++
T Consensus        52 VR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~  131 (347)
T KOG0647|consen   52 VRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLV  131 (347)
T ss_pred             eEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeE
Confidence            68999986 4544332  789999999999999999999999999999999999999999999999999988655  899


Q ss_pred             EeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|++|.+++.||++...++.....++++.++..-  ...++.+..++.|.+|+|+
T Consensus       132 TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~--~pm~vVata~r~i~vynL~  184 (347)
T KOG0647|consen  132 TGSWDKTLKFWDTRSSNPVATLQLPERVYAADVL--YPMAVVATAERHIAVYNLE  184 (347)
T ss_pred             ecccccceeecccCCCCeeeeeeccceeeehhcc--CceeEEEecCCcEEEEEcC
Confidence            9999999999999988888777778888888763  4567777788999999984

>KOG0643|consensus

Probab=99.89  E-value=4.2e-21  Score=111.33  Aligned_cols=130  Identities=19%  Similarity=0.294  Sum_probs=114.6

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC-----CCcEEEEeCCCC-------C-eEEeeccccceEEEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME-----NSNVEVLHALKP-------D-KYQLHLHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~~~v~~~~~~~~-------~-~~~~~~~~~~v~~~~~   67 (131)
                      +++||+++|+++..+..+..|..+.|+++|++++....     .+.|.++|++..       + ..++..+.+.+..+.|
T Consensus        76 ~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~W  155 (327)
T KOG0643|consen   76 AKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALW  155 (327)
T ss_pred             eEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeee
Confidence            58999999999999999999999999999998776543     457999998732       2 3567778889999999


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|-+.+|++|..++.|..||.++|+..  ....|...|..+.++|+..++++++.|.+.++||.+
T Consensus       156 g~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~  220 (327)
T KOG0643|consen  156 GPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVR  220 (327)
T ss_pred             cccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeecc
Confidence            999999999999999999999999776  445688999999999999999999999999999974

>KOG0316|consensus

Probab=99.89  E-value=1.5e-21  Score=111.57  Aligned_cols=119  Identities=15%  Similarity=0.191  Sum_probs=110.5

Q ss_pred             eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612         12 LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        12 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~   89 (131)
                      ...+ .+++.|.++.|+-+|++.++++.|.++++|+...+.+ .+..+|..+|.+++.+.|...|++++.|+.+.+||..
T Consensus        10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~   89 (307)
T KOG0316|consen   10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN   89 (307)
T ss_pred             ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence            3444 7889999999999999999999999999999987775 7788999999999999999999999999999999999


Q ss_pred             CCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         90 YGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        90 ~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|+.. ...+|.+.|..+.|+.+...+++|+-|.++++||.|
T Consensus        90 TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCR  131 (307)
T KOG0316|consen   90 TGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCR  131 (307)
T ss_pred             cCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcc
Confidence            99998 778899999999999999999999999999999976

>KOG0269|consensus

Probab=99.89  E-value=2.8e-22  Score=129.41  Aligned_cols=130  Identities=18%  Similarity=0.313  Sum_probs=110.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++||++..+...++ +..+.|..+.|+|. +..++++...|.+.+||++....  .++.+|.++|.++.|+|++.+|++
T Consensus       158 vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lAT  237 (839)
T KOG0269|consen  158 VKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLAT  237 (839)
T ss_pred             EEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeee
Confidence            689999988888777 77788999999995 66889999999999999997764  667899999999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCE-EEEec--CCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKY-IVTGS--GDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~-l~~~~--~d~~i~vw~~~  130 (131)
                      |++|+.+++||+.+++..  .......++.++.|.|..++ |++++  .|..|+|||++
T Consensus       238 GGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr  296 (839)
T KOG0269|consen  238 GGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVR  296 (839)
T ss_pred             cCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeec
Confidence            999999999999865543  44556788999999998665 45544  37789999996

>KOG0647|consensus

Probab=99.89  E-value=9.7e-22  Score=115.46  Aligned_cols=115  Identities=21%  Similarity=0.296  Sum_probs=101.1

Q ss_pred             cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCC-Ce--EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612         16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKP-DK--YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~-~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      ..+..|.+++||| ...+++.++.|++|++|++... ..  .....|.+++.+++|+.||..+++++.|+.+++||+.++
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~  104 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG  104 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence            4567899999999 5666778999999999999763 32  445678999999999999999999999999999999999


Q ss_pred             ceEEecCCCCCeEEEEECCCCC--EEEEecCCCcEEEEEee
Q psy15612         92 ASIFQSKESSSVLSCDISADDK--YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        92 ~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~vw~~~  130 (131)
                      +......|.+.|..+.|-+...  .|++|+.|.+++.||.|
T Consensus       105 Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R  145 (347)
T KOG0647|consen  105 QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTR  145 (347)
T ss_pred             CeeeeeecccceeEEEEecCCCcceeEecccccceeecccC
Confidence            8888888999999999987655  78999999999999986

>KOG0267|consensus

Probab=99.88  E-value=5.7e-23  Score=131.86  Aligned_cols=130  Identities=19%  Similarity=0.345  Sum_probs=119.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-CeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-DKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||++.++.+.++ +|...+.++.|+|-+.+.+.|+.|..+.+||.+.. ......+|...+..++|+|+|++++.++
T Consensus        94 iK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~  173 (825)
T KOG0267|consen   94 IKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGG  173 (825)
T ss_pred             eeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccC
Confidence            689999999988888 99999999999999999999999999999999844 4566778999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|..+++||...|+.. ....|.+.+..+.|+|..-++++|+.|+++++||+.
T Consensus       174 ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dle  226 (825)
T KOG0267|consen  174 EDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLE  226 (825)
T ss_pred             CcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccc
Confidence            9999999999999988 556699999999999999999999999999999985

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.88  E-value=1.5e-20  Score=127.14  Aligned_cols=128  Identities=23%  Similarity=0.299  Sum_probs=110.6

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYC-PSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+++++.+..+.+...+.++.|+ +++..+++|+.|+.|++||++...  ...+.+|...|.++.|. ++..++++
T Consensus       600 v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~  678 (793)
T PLN00181        600 VKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSS  678 (793)
T ss_pred             EEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEE
Confidence            689999999988888666789999995 579999999999999999998765  35567899999999997 68899999


Q ss_pred             CCCCeEEEeeCCCC------ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYG------ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.|+.+++||+..+      +.+ ...+|...+..++|+|+++++++++.|+.+.+|+.
T Consensus       679 s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~  737 (793)
T PLN00181        679 STDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHK  737 (793)
T ss_pred             ECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEEC
Confidence            99999999999743      233 55678888999999999999999999999999985

>KOG0310|consensus

Probab=99.88  E-value=8e-21  Score=117.24  Aligned_cols=128  Identities=15%  Similarity=0.212  Sum_probs=108.9

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCC-CeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKP-DKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      +++||+.+......+ +|+..|.+.+++|. +.++++|++||+|++||++.. .......|..+|..+.+-|.|..|+++
T Consensus       135 ~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasA  214 (487)
T KOG0310|consen  135 VKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASA  214 (487)
T ss_pred             EEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEc
Confidence            478999988864344 89999999999996 557899999999999999876 334445688899999999999999988


Q ss_pred             CCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      + .+.+++||+.+|..+  ....|.-.|+|+.+..+++.|++++-|+.+++||+
T Consensus       215 g-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~  267 (487)
T KOG0310|consen  215 G-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDT  267 (487)
T ss_pred             C-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEc
Confidence            7 567999999976655  34449999999999999999999999999999995

>KOG0318|consensus

Probab=99.88  E-value=1.8e-20  Score=117.01  Aligned_cols=114  Identities=18%  Similarity=0.345  Sum_probs=100.7

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee---ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH---LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      .|..-|.+++|+|||.++++++.|+++.+||-.+++. ..+.   +|++.|+.+.|+||++.+++++.|.++++||..+.
T Consensus       188 ~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~  267 (603)
T KOG0318|consen  188 EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN  267 (603)
T ss_pred             ccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeecc
Confidence            5777899999999999999999999999999998885 4454   79999999999999999999999999999997755


Q ss_pred             ceEE--------------------------------------------ecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         92 ASIF--------------------------------------------QSKESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        92 ~~~~--------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      ++..                                            ..+|...|+++..+|++++|++++.||.|.-|
T Consensus       268 slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W  347 (603)
T KOG0318|consen  268 SLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSW  347 (603)
T ss_pred             ceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEE
Confidence            4431                                            01577889999999999999999999999999


Q ss_pred             Ee
Q psy15612        128 EV  129 (131)
Q Consensus       128 ~~  129 (131)
                      +.
T Consensus       348 ~~  349 (603)
T KOG0318|consen  348 DS  349 (603)
T ss_pred             ec
Confidence            86

>KOG0283|consensus

Probab=99.88  E-value=8.3e-22  Score=127.61  Aligned_cols=120  Identities=15%  Similarity=0.254  Sum_probs=108.3

Q ss_pred             ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEcc-CCCEEEEeCCCCeEEEee
Q psy15612         10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAA-CGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~   87 (131)
                      +++..+ +|.+.|..+.|+. .++|++++.|.+|++|++....+.....|...|+|++|+| |.++|++|+-|+.+++|+
T Consensus       360 kP~~ef~GHt~DILDlSWSK-n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWs  438 (712)
T KOG0283|consen  360 KPFCEFKGHTADILDLSWSK-NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWS  438 (712)
T ss_pred             cchhhhhccchhheeccccc-CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEee
Confidence            344445 8999999999996 5588899999999999999999999999999999999999 789999999999999999


Q ss_pred             CCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         88 TPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +...+...-..-..-|++++|.|+|++.+.|+.+|.+++|+..
T Consensus       439 I~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~  481 (712)
T KOG0283|consen  439 ISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTE  481 (712)
T ss_pred             cCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEcc
Confidence            9988888666667999999999999999999999999999863

>KOG0310|consensus

Probab=99.88  E-value=5.4e-22  Score=122.29  Aligned_cols=130  Identities=24%  Similarity=0.301  Sum_probs=110.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCC-EEEEe
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGK-WFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~~~~~   77 (131)
                      +.||+..+....+++ .....++++.|..||++++.|+..|.|++||..+.. ++.+.+|+.++..+.|+|++. .+++|
T Consensus        50 vqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~  129 (487)
T KOG0310|consen   50 VQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSG  129 (487)
T ss_pred             EEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEec
Confidence            356777766666666 677889999999999999999999999999965543 367889999999999999655 56678


Q ss_pred             CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      +.|+.+++||+.++... .+.+|.+-|.+.+|+|... .+++|+.||+|++||++
T Consensus       130 sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR  184 (487)
T KOG0310|consen  130 SDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTR  184 (487)
T ss_pred             CCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEec
Confidence            88888999999988876 7788999999999999655 77899999999999986

>KOG1407|consensus

Probab=99.88  E-value=1.3e-20  Score=109.03  Aligned_cols=130  Identities=15%  Similarity=0.275  Sum_probs=114.8

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      |++||.+++++.......+.-.-+.|+|+|.+++.++.|..|.+.|.++.+........-.+..+.|+-++.++......
T Consensus        89 ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~Gl  168 (313)
T KOG1407|consen   89 IRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGL  168 (313)
T ss_pred             EEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCC
Confidence            68999999999988866666667999999999999999999999999988876555566678889999888888888888


Q ss_pred             CeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         81 NLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        81 ~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |.|.|.....-+++ ....|+....|+.|+|+|+++++|+.|-.+.+||+.
T Consensus       169 G~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~  219 (313)
T KOG1407|consen  169 GCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVD  219 (313)
T ss_pred             ceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChh
Confidence            99999988877777 778899999999999999999999999999999974

>KOG0973|consensus

Probab=99.88  E-value=2.6e-21  Score=128.26  Aligned_cols=114  Identities=21%  Similarity=0.299  Sum_probs=104.3

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC----------C-C--------eEEeeccccceEEEEEccCCCEEEE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK----------P-D--------KYQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~----------~-~--------~~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      .|.+.|.++.|+|||++||+|+.|+.+.+|+...          + .        +..+.+|.+.|.++.|+|++.++++
T Consensus        67 ~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS  146 (942)
T KOG0973|consen   67 DHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVS  146 (942)
T ss_pred             cccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEE
Confidence            7899999999999999999999999999998772          0 0        2346789999999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++-|+.|.+|+..+.+.+ .+.+|.+.|..+.|.|-|+||++-+.|+++++|++
T Consensus       147 ~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt  200 (942)
T KOG0973|consen  147 VSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRT  200 (942)
T ss_pred             ecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEc
Confidence            999999999999999777 78899999999999999999999999999999985

>KOG0292|consensus

Probab=99.87  E-value=4e-21  Score=126.25  Aligned_cols=130  Identities=15%  Similarity=0.166  Sum_probs=115.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---------------------------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---------------------------   52 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---------------------------   52 (131)
                      ||||+..+.+++..+ +|+.-|++..|+|....+++++-|.+|++||+..-+.                           
T Consensus       117 IrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~Da  196 (1202)
T KOG0292|consen  117 IRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDA  196 (1202)
T ss_pred             EEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCe
Confidence            699999999999998 9999999999999999999999999999999863210                           


Q ss_pred             ---EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce-E--EecCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612         53 ---YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS-I--FQSKESSSVLSCDISADDKYIVTGSGDKKATV  126 (131)
Q Consensus        53 ---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~-~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  126 (131)
                         ..+.+|...|.-++|+|.-..|++|+.|+.+++|.+...+. .  ...+|...|.++-|+|...++++.++|++|+|
T Consensus       197 VVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirV  276 (1202)
T KOG0292|consen  197 VVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRV  276 (1202)
T ss_pred             eeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEE
Confidence               12457889999999999999999999999999999875443 2  67789999999999999999999999999999


Q ss_pred             EEee
Q psy15612        127 YEVI  130 (131)
Q Consensus       127 w~~~  130 (131)
                      ||+.
T Consensus       277 wDm~  280 (1202)
T KOG0292|consen  277 WDMT  280 (1202)
T ss_pred             Eecc
Confidence            9974

>KOG0283|consensus

Probab=99.87  E-value=1.1e-20  Score=122.46  Aligned_cols=130  Identities=12%  Similarity=0.147  Sum_probs=110.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      ||+|++...+++..+.|+.-|+|++|+| |.+++++|+-|+.++||++...++..-..-...|..++|.|||+..+.|+.
T Consensus       392 VRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~  471 (712)
T KOG0283|consen  392 VRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTF  471 (712)
T ss_pred             EEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEe
Confidence            6999999999999999999999999999 788999999999999999988887554445578999999999999999999


Q ss_pred             CCeEEEeeCCCCceE--Ee-------cCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGASI--FQ-------SKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~--~~-------~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      +|..++|+...-+..  ..       +.....|+.+.|.|... .+++.+.|..|+|+|++
T Consensus       472 ~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~  532 (712)
T KOG0283|consen  472 NGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGR  532 (712)
T ss_pred             ccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEecc
Confidence            999999999876654  11       11234899999997533 56677889999999984

>KOG0308|consensus

Probab=99.87  E-value=4.7e-21  Score=122.02  Aligned_cols=130  Identities=15%  Similarity=0.172  Sum_probs=114.3

Q ss_pred             CEEEeCCCC--ceeeee-cCCCCeEEEEE-CCCCCEEEEEeCCCcEEEEeCCCCCe-----------EEee-ccccceEE
Q psy15612          1 MYLQSVSPG--RQLQQH-DFSSQIFSLGY-CPSGEWLAVGMENSNVEVLHALKPDK-----------YQLH-LHESCVLS   64 (131)
Q Consensus         1 i~iwd~~~~--~~~~~~-~~~~~v~~~~~-~~~~~~l~~~~~~~~v~~~~~~~~~~-----------~~~~-~~~~~v~~   64 (131)
                      |++|+...+  -++.++ .|...|.++++ .++...+++|+-|+.|.+||+.++..           ..+. ++...+++
T Consensus        97 VK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYS  176 (735)
T KOG0308|consen   97 VKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYS  176 (735)
T ss_pred             EEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceee
Confidence            578998866  566666 89999999999 77888999999999999999986621           1122 67889999


Q ss_pred             EEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         65 LRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.++.|..+++|+..+.+++||.++.+.. .+.+|...|..+-.+++|+.+++++.|++|++||+.
T Consensus       177 LA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg  243 (735)
T KOG0308|consen  177 LAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG  243 (735)
T ss_pred             eecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecc
Confidence            999999999999999999999999998877 777999999999999999999999999999999985

>KOG0293|consensus

Probab=99.87  E-value=4.5e-21  Score=116.91  Aligned_cols=114  Identities=23%  Similarity=0.370  Sum_probs=102.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      .|..+|..+.||++|++||+++.|.+..+|++....    ..++.+|..+|.-+.||||.+++++++.+..+.+||..+|
T Consensus       222 ~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tg  301 (519)
T KOG0293|consen  222 DHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTG  301 (519)
T ss_pred             hCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcc
Confidence            799999999999999999999999999999875332    3567889999999999999999999999999999999999


Q ss_pred             ceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         92 ASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        92 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ...  +..+++-.+.+.+|.|||..+++|+.|+.+..||+
T Consensus       302 d~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdl  341 (519)
T KOG0293|consen  302 DLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDL  341 (519)
T ss_pred             hhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecC
Confidence            987  34445688999999999999999999999999986

>KOG0639|consensus

Probab=99.87  E-value=3.9e-21  Score=119.88  Aligned_cols=131  Identities=61%  Similarity=0.908  Sum_probs=119.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE--------------------------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY--------------------------   53 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~--------------------------   53 (131)
                      |+|||+.++..+..+ +|...+.++.++++|..|.+|+.|.+|+-||++.++..                          
T Consensus       533 I~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMe  612 (705)
T KOG0639|consen  533 IAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGME  612 (705)
T ss_pred             EEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecc
Confidence            689999999999888 99999999999999999999999999999999865310                          


Q ss_pred             ---------------EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612         54 ---------------QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        54 ---------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                                     .+..|++.|.+++|++.|+++++.+.|+.+..|.+.-|..++.....+.|.+...+.+.+++++|
T Consensus       613 ns~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTG  692 (705)
T KOG0639|consen  613 NSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTG  692 (705)
T ss_pred             cCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCceEEEec
Confidence                           23357888999999999999999999999999999999999888889999999999999999999


Q ss_pred             cCCCcEEEEEeeC
Q psy15612        119 SGDKKATVYEVIY  131 (131)
Q Consensus       119 ~~d~~i~vw~~~~  131 (131)
                      +.|.+..||.+.|
T Consensus       693 SGdkkATVYeV~Y  705 (705)
T KOG0639|consen  693 SGDKKATVYEVIY  705 (705)
T ss_pred             CCCcceEEEEEeC
Confidence            9999999999987

>KOG0274|consensus

Probab=99.87  E-value=2.9e-20  Score=119.95  Aligned_cols=125  Identities=18%  Similarity=0.219  Sum_probs=111.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      +++||..+|++...+ +|.+.+.++...  +..+++|+.|.+|++|++.++.+..+ .+|...|.++..+  +..+++++
T Consensus       273 ~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs  348 (537)
T KOG0274|consen  273 ERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGS  348 (537)
T ss_pred             EEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEe
Confidence            589999999999999 799999999774  55677889999999999998887554 4599999999997  88999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.|.+||+.+++++ .+.+|...|.++.+.+. ..+++|+.|+.|++||++
T Consensus       349 ~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~  400 (537)
T KOG0274|consen  349 YDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLR  400 (537)
T ss_pred             cCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCC
Confidence            9999999999999999 78889999999988765 889999999999999985

>KOG1446|consensus

Probab=99.87  E-value=1.3e-19  Score=106.86  Aligned_cols=130  Identities=17%  Similarity=0.195  Sum_probs=104.7

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe------------------------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL------------------------   55 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~------------------------   55 (131)
                      ||..++.+.+.++.+ +|...|.+++.+|-+..+++++.|.+|++||++..++.-+                        
T Consensus        82 IryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~  161 (311)
T KOG1446|consen   82 IRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGS  161 (311)
T ss_pred             eEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCC
Confidence            567788889999888 9999999999999999999999999999999985542100                        


Q ss_pred             ---------------------e-ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecC--C-CCCeEEEEEC
Q psy15612         56 ---------------------H-LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSK--E-SSSVLSCDIS  109 (131)
Q Consensus        56 ---------------------~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~--~-~~~v~~~~~~  109 (131)
                                           . +...+...+.|||||++++.+...+.+++.|.-+|..+ ....  . .......+|+
T Consensus       162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ft  241 (311)
T KOG1446|consen  162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFT  241 (311)
T ss_pred             CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEEC
Confidence                                 0 12345567999999999999988999999999888876 2211  1 2233678899


Q ss_pred             CCCCEEEEecCCCcEEEEEee
Q psy15612        110 ADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       110 ~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+++++++++.||+|.+|++.
T Consensus       242 Pds~Fvl~gs~dg~i~vw~~~  262 (311)
T KOG1446|consen  242 PDSKFVLSGSDDGTIHVWNLE  262 (311)
T ss_pred             CCCcEEEEecCCCcEEEEEcC
Confidence            999999999999999999974

>KOG0305|consensus

Probab=99.87  E-value=4.8e-21  Score=120.68  Aligned_cols=128  Identities=16%  Similarity=0.223  Sum_probs=111.9

Q ss_pred             CEEEeCCCCceeeee-c-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-D-FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |.|||.++.+.+..+ . |...|.+++|.  +..+.+|+.++.+..+|++..+.  ..+.+|...|..++|++|++++++
T Consensus       241 v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lAS  318 (484)
T KOG0305|consen  241 VQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLAS  318 (484)
T ss_pred             EEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeecc
Confidence            579999988888777 4 89999999997  77889999999999999987763  346789999999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECC-CCCEEEEec--CCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISA-DDKYIVTGS--GDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~--~d~~i~vw~~~  130 (131)
                      ++.|+.+.|||....+.+ ....|...|..++|+| ...+||+|+  .|+.|++||..
T Consensus       319 GgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~  376 (484)
T KOG0305|consen  319 GGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTN  376 (484)
T ss_pred             CCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcC
Confidence            999999999999766666 7788999999999999 566788765  48999999974

>KOG0313|consensus

Probab=99.86  E-value=1.1e-20  Score=113.86  Aligned_cols=119  Identities=13%  Similarity=0.158  Sum_probs=101.2

Q ss_pred             eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612         11 QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        11 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~   89 (131)
                      ++..+ +|.++|.++.|++ ...+++++.|.+|+.||+.++....-........++..+|..+.+++++.|..+++||.+
T Consensus       252 P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR  330 (423)
T KOG0313|consen  252 PLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPR  330 (423)
T ss_pred             ceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCC
Confidence            33445 8999999999998 667889999999999999988864433445678999999999999999999999999999


Q ss_pred             CCce--E--EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         90 YGAS--I--FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        90 ~~~~--~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      ++.-  .  .+.+|...|..+.|+|... .|++++.|+++++||+|
T Consensus       331 ~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvR  376 (423)
T KOG0313|consen  331 TGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVR  376 (423)
T ss_pred             CCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEec
Confidence            7643  2  5678999999999999766 46899999999999997

>KOG0288|consensus

Probab=99.86  E-value=3.7e-20  Score=112.67  Aligned_cols=128  Identities=13%  Similarity=0.172  Sum_probs=110.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eec----cccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHL----HESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~   75 (131)
                      ||+||.++..........+.|.++..++++..+.+.+.|.++.+.|+++..+.. +..    .......+.|||++.+++
T Consensus       324 vRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~Yva  403 (459)
T KOG0288|consen  324 VRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVA  403 (459)
T ss_pred             eEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceee
Confidence            689999999999888777899999999999999999999999999999988633 221    223477899999999999


Q ss_pred             EeCCCCeEEEeeCCCCceE-EecCCC--CCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         76 STGKDNLLNAWRTPYGASI-FQSKES--SSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +|+.|+.+++|+..++++. .+....  ..|.+++|+|.|..+++++.++.+.+|.
T Consensus       404 AGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  404 AGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             eccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            9999999999999999988 333333  3699999999999999999999999983

>KOG0306|consensus

Probab=99.86  E-value=1.1e-20  Score=122.07  Aligned_cols=127  Identities=19%  Similarity=0.293  Sum_probs=113.9

Q ss_pred             EEEeCCCCceeee-ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQ-HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      ++|-+.+-+--.. ++|.-+|.+|..+||++.+++|+.|.+|++|-+.-+.+ ..+.+|...|.++.|-|+...+.+++.
T Consensus       533 kVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gK  612 (888)
T KOG0306|consen  533 KVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGK  612 (888)
T ss_pred             EEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecC
Confidence            4555555554433 49999999999999999999999999999999998888 557899999999999999999999999


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      |+.++-||-..-+.. .+.+|...|++++.+|+|.++++++.|..|++|.
T Consensus       613 D~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE  662 (888)
T KOG0306|consen  613 DGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWE  662 (888)
T ss_pred             cceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeee
Confidence            999999998877666 7788999999999999999999999999999996

>KOG0640|consensus

Probab=99.86  E-value=9.7e-21  Score=112.17  Aligned_cols=118  Identities=14%  Similarity=0.257  Sum_probs=103.5

Q ss_pred             eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612         12 LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        12 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      +.++ .|.++|+.+.|+|....|++++.|++|++||......   .+......++.++.|+|.|.+++.+.....+++||
T Consensus       165 IRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYd  244 (430)
T KOG0640|consen  165 IRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYD  244 (430)
T ss_pred             EeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEe
Confidence            3444 8999999999999999999999999999999976543   33445567899999999999999999999999999


Q ss_pred             CCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         88 TPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        88 ~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.+.++.    ....|.+.|.++.+++.+++.++++.||.|++||-
T Consensus       245 v~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDG  290 (430)
T KOG0640|consen  245 VNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDG  290 (430)
T ss_pred             ccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeecc
Confidence            9998876    23458899999999999999999999999999984

>KOG0268|consensus

Probab=99.86  E-value=1.9e-21  Score=116.69  Aligned_cols=129  Identities=20%  Similarity=0.303  Sum_probs=113.9

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |.+||++++++++.+-....-+.++|+|.+-.+.++++|..+..+|++.-.  +.....|.+.|.++.|||.|+-|++|+
T Consensus       212 IvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvsgs  291 (433)
T KOG0268|consen  212 IVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGS  291 (433)
T ss_pred             eEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcccc
Confidence            578999999999888777888899999976678889999999999997654  355678999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .|.+|+||....+...  .....-+.|.++.||.|.+++++||.|+.|++|..
T Consensus       292 yDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka  344 (433)
T KOG0268|consen  292 YDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKA  344 (433)
T ss_pred             ccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeec
Confidence            9999999999877665  55666789999999999999999999999999974

>KOG0305|consensus

Probab=99.86  E-value=2.2e-20  Score=117.77  Aligned_cols=127  Identities=21%  Similarity=0.299  Sum_probs=113.5

Q ss_pred             CEEEeCCCCceeeeecC-CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeec-cccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDF-SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHL-HESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++|+..+++....... ...|.++.|+++|..|++|..+|.|.+||....+ ...+.. |...|.+++|+  +..+.+|
T Consensus       199 vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssG  276 (484)
T KOG0305|consen  199 VYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSG  276 (484)
T ss_pred             EEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEe
Confidence            68999999987666533 7899999999999999999999999999998766 456666 89999999997  7788999


Q ss_pred             CCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++++.|..+|++..+..  ...+|.+.|..+.|+++++++++|+.|+.+.|||.
T Consensus       277 sr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~  330 (484)
T KOG0305|consen  277 SRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDG  330 (484)
T ss_pred             cCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccC
Confidence            99999999999988877  36789999999999999999999999999999996

>KOG0303|consensus

Probab=99.86  E-value=9.9e-21  Score=114.78  Aligned_cols=115  Identities=21%  Similarity=0.357  Sum_probs=102.7

Q ss_pred             cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC--------eEEeeccccceEEEEEccCC-CEEEEeCCCCeEEE
Q psy15612         16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD--------KYQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNA   85 (131)
Q Consensus        16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~   85 (131)
                      +|.++|..++|+| +...|++|+.|.++.+|++..+-        ...+.+|...|.-++|+|.. +.+++++.|+.+.+
T Consensus        79 GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~i  158 (472)
T KOG0303|consen   79 GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSI  158 (472)
T ss_pred             CccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEE
Confidence            7999999999999 56788999999999999986432        24578899999999999974 56789999999999


Q ss_pred             eeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         86 WRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        86 w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ||+.+|+.+....|+.-|.+++|+.+|.++++++.|++|+|||.+
T Consensus       159 Wnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr  203 (472)
T KOG0303|consen  159 WNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPR  203 (472)
T ss_pred             EeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCC
Confidence            999999998666699999999999999999999999999999975

>KOG0639|consensus

Probab=99.85  E-value=7.6e-21  Score=118.62  Aligned_cols=130  Identities=19%  Similarity=0.217  Sum_probs=109.7

Q ss_pred             CEEEeCCCC---ceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCC
Q psy15612          1 MYLQSVSPG---RQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~---~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~   71 (131)
                      |++||+...   ..+..+   ....-+.++.+.|||+.|++|++..++.+||+.....   ..+.......+.++.+||.
T Consensus       442 VKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDa  521 (705)
T KOG0639|consen  442 VKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDA  521 (705)
T ss_pred             EEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCcc
Confidence            689999753   233333   3445699999999999999999999999999986653   2344444567789999999


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +..+++..||.|.|||+.+...+ .+.+|.+.+.|+..+++|..|-+|+-|.+++-||+|
T Consensus       522 kvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlr  581 (705)
T KOG0639|consen  522 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLR  581 (705)
T ss_pred             ceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhh
Confidence            99999999999999999988877 778899999999999999999999999999999986

>KOG0274|consensus

Probab=99.85  E-value=2.2e-19  Score=115.95  Aligned_cols=126  Identities=20%  Similarity=0.298  Sum_probs=111.9

Q ss_pred             CEEEeCCCCceeee-e-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQ-H-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||..+++.+.. + +|.+.|.++++...+..+++|+.|.++++||..++.+ ..+.+|.+.+.++..  .+..+++|
T Consensus       230 l~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~--~~~~~~sg  307 (537)
T KOG0274|consen  230 LHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTI--DPFLLVSG  307 (537)
T ss_pred             eEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEc--cCceEeec
Confidence            46899999988877 6 9999999999988788999999999999999999997 567889999999876  45667788


Q ss_pred             CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++|.++++|++.+++.+ ...+|.+.|.++..+  +.++++|+.|++|++||++
T Consensus       308 s~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~  359 (537)
T KOG0274|consen  308 SRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPR  359 (537)
T ss_pred             cCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhh
Confidence            99999999999999999 444599999999997  8899999999999999975

>KOG0302|consensus

Probab=99.85  E-value=1.9e-20  Score=112.97  Aligned_cols=120  Identities=15%  Similarity=0.233  Sum_probs=101.2

Q ss_pred             eeeee-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccC-CCEEEEeCCCCeE
Q psy15612         11 QLQQH-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAAC-GKWFVSTGKDNLL   83 (131)
Q Consensus        11 ~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i   83 (131)
                      ++.++ +|...-+.++|||-. ..|++|..-+.+++|...++.-    ..+.+|...|.+++|||. ...|++++.|+.|
T Consensus       203 Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsI  282 (440)
T KOG0302|consen  203 PLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSI  282 (440)
T ss_pred             ceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceE
Confidence            34444 688888999999942 2477888888999999887652    446779999999999995 5578999999999


Q ss_pred             EEeeCCCC---ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         84 NAWRTPYG---ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        84 ~~w~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|||++.+   ..+..+.|.+.|.-++|+..-.+|++|+.||+++|||+|
T Consensus       283 rIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR  332 (440)
T KOG0302|consen  283 RIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLR  332 (440)
T ss_pred             EEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhh
Confidence            99999988   344678899999999999988899999999999999997

>KOG0646|consensus

Probab=99.85  E-value=9.8e-20  Score=112.05  Aligned_cols=130  Identities=18%  Similarity=0.306  Sum_probs=108.3

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC----------CeEEeeccccceEEEEEcc
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP----------DKYQLHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~----------~~~~~~~~~~~v~~~~~~~   69 (131)
                      |++|.+.+|+.+..+ .|-..|.++.|+.||.++++|+.||.|.+|.+..-          ....+..|.-+|.++...+
T Consensus       105 lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~  184 (476)
T KOG0646|consen  105 LYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGS  184 (476)
T ss_pred             EEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecC
Confidence            689999999999888 89999999999999999999999999999987421          1355678889999988776


Q ss_pred             C--CCEEEEeCCCCeEEEeeCCCCceEE----------------------------------------------------
Q psy15612         70 C--GKWFVSTGKDNLLNAWRTPYGASIF----------------------------------------------------   95 (131)
Q Consensus        70 ~--~~~~~~~~~~~~i~~w~~~~~~~~~----------------------------------------------------   95 (131)
                      .  ...+++++.|.++++||+..|..+.                                                    
T Consensus       185 Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~  264 (476)
T KOG0646|consen  185 GGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEE  264 (476)
T ss_pred             CCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccc
Confidence            4  3578999999999999976555431                                                    


Q ss_pred             ------ecCCCC--CeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         96 ------QSKESS--SVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        96 ------~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                            ..+|..  .|+|++.+-||.+|++|+.||++.|||+.
T Consensus       265 ~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~  307 (476)
T KOG0646|consen  265 NTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY  307 (476)
T ss_pred             cceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc
Confidence                  013444  89999999999999999999999999973

>KOG0278|consensus

Probab=99.85  E-value=2e-21  Score=111.95  Aligned_cols=128  Identities=13%  Similarity=0.269  Sum_probs=116.1

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      ++||.-+|..+..+.|..-|.+++|+.|.+.|++|+.+..+++||+...+  ...+.+|++.|..+.|....+.|++++.
T Consensus        84 kvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSad  163 (334)
T KOG0278|consen   84 KVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSAD  163 (334)
T ss_pred             hhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeecc
Confidence            58999999999999999999999999999999999999999999998766  4667899999999999998999999999


Q ss_pred             CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.+++||.+++........++.|.++.++++|+++.++ ..+.|+.||..
T Consensus       164 d~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia-~gssV~Fwdak  213 (334)
T KOG0278|consen  164 DKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIA-YGSSVKFWDAK  213 (334)
T ss_pred             CCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEe-cCceeEEeccc
Confidence            999999999999999777788999999999999988665 45689999863

>KOG0772|consensus

Probab=99.85  E-value=8.9e-21  Score=118.32  Aligned_cols=115  Identities=12%  Similarity=0.155  Sum_probs=93.6

Q ss_pred             cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEee------ccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612         16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQLH------LHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~~------~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      +|...+.+-+|+|..+ .+++++.|+++++|++...+. .++.      +..-.+..++|++||+.|+.++.||.|.+|+
T Consensus       266 GHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~  345 (641)
T KOG0772|consen  266 GHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWD  345 (641)
T ss_pred             CceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeee
Confidence            5888899999999744 678999999999999976542 2221      2334678999999999999999999999999


Q ss_pred             CCCCceE----EecCCCC--CeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         88 TPYGASI----FQSKESS--SVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        88 ~~~~~~~----~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..+....    ....|..  .|+++.||++|++|++-+.|+++++|||+
T Consensus       346 ~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr  394 (641)
T KOG0772|consen  346 KGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR  394 (641)
T ss_pred             cCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence            8543221    3445655  89999999999999999999999999997

>KOG0306|consensus

Probab=99.85  E-value=3.3e-20  Score=119.99  Aligned_cols=130  Identities=16%  Similarity=0.230  Sum_probs=115.5

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |.+||+++++..+.+   .....+.++.-+|+...|+.|..||.|++|+..+... ..+.+|+..|..+.|...|-.+++
T Consensus        45 vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaS  124 (888)
T KOG0306|consen   45 VNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLAS  124 (888)
T ss_pred             EeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEee
Confidence            468999999665544   4446899999999999999999999999999987764 677899999999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.|+.|.+||+-...-+ .+.+|...++..-|....+++++.+.|+.+++||+.
T Consensus       125 GskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~  179 (888)
T KOG0306|consen  125 GSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLE  179 (888)
T ss_pred             cCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecc
Confidence            999999999999876666 778899999999999888999999999999999984

>KOG4283|consensus

Probab=99.84  E-value=6.3e-20  Score=108.07  Aligned_cols=129  Identities=13%  Similarity=0.289  Sum_probs=111.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCC---CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE-EE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPS---GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW-FV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~-~~   75 (131)
                      +++||+.+-+....+..++.|++-+++|-   ..++++|..+..|++.|+.++.. +.+.+|...|..+.|+|...+ ++
T Consensus       126 lKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLa  205 (397)
T KOG4283|consen  126 LKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLA  205 (397)
T ss_pred             EEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEE
Confidence            58999999999988989999999999994   44678889999999999999886 778999999999999998776 57


Q ss_pred             EeCCCCeEEEeeCCCCc-eE---------------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         76 STGKDNLLNAWRTPYGA-SI---------------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~-~~---------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +++.|+.+++||++... +.               ....|.+.+..++|+.++.++++.+.|..+++|+.
T Consensus       206 tgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~  275 (397)
T KOG4283|consen  206 TGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNM  275 (397)
T ss_pred             ecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeec
Confidence            89999999999987431 11               12347788999999999999999999999999985

>KOG0640|consensus

Probab=99.84  E-value=5.4e-20  Score=109.04  Aligned_cols=129  Identities=20%  Similarity=0.407  Sum_probs=109.1

Q ss_pred             CEEEeCCCC---ceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE----eeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPG---RQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ----LHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~   73 (131)
                      |+++|....   +..+.+....+|.++.|+|.|.+|+.|.....+++||+.+.++..    -.+|.+.|.++.+++.|+.
T Consensus       196 vKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~l  275 (430)
T KOG0640|consen  196 VKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSL  275 (430)
T ss_pred             EEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccE
Confidence            466776532   223344667889999999999999999999999999999988633    3568899999999999999


Q ss_pred             EEEeCCCCeEEEeeCCCCceE--EecCC-CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI--FQSKE-SSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~--~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .++++.||.|++||--+++++  ....| ++.|.+..|..+|+++++.+.|..+++|.+
T Consensus       276 YvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi  334 (430)
T KOG0640|consen  276 YVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEI  334 (430)
T ss_pred             EEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeee
Confidence            999999999999998888887  44445 467889999999999999999999999987

>KOG0300|consensus

Probab=99.84  E-value=1.7e-20  Score=111.67  Aligned_cols=129  Identities=19%  Similarity=0.294  Sum_probs=114.9

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC------CCCC-----------------------
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHA------LKPD-----------------------   51 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~------~~~~-----------------------   51 (131)
                      +||.+++++++..+ +|.+.|++++|++.+.++++++.|++-.||..      ....                       
T Consensus       173 ~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~  252 (481)
T KOG0300|consen  173 RIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDS  252 (481)
T ss_pred             eEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccccccc
Confidence            69999999999998 99999999999999999999999999888862      1100                       


Q ss_pred             ------------eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEe
Q psy15612         52 ------------KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        52 ------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                                  +..+.+|.+.|.+..|-..|+.++++++|++-.+||+++|+.+ .+.+|.+....++-+|..+++++.
T Consensus       253 ~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTs  332 (481)
T KOG0300|consen  253 SEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTS  332 (481)
T ss_pred             ccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEe
Confidence                        0135578888889999999999999999999999999999999 888999999999999999999999


Q ss_pred             cCCCcEEEEEee
Q psy15612        119 SGDKKATVYEVI  130 (131)
Q Consensus       119 ~~d~~i~vw~~~  130 (131)
                      +.|.+.++||++
T Consensus       333 SrDtTFRLWDFR  344 (481)
T KOG0300|consen  333 SRDTTFRLWDFR  344 (481)
T ss_pred             ccCceeEeccch
Confidence            999999999986

>KOG0267|consensus

Probab=99.84  E-value=5.6e-21  Score=122.90  Aligned_cols=128  Identities=20%  Similarity=0.293  Sum_probs=111.8

Q ss_pred             EEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      +|.......+..+ +|..+|.++.|+++..+|+.|..+|+|++||++..+. +.+.+|...+..+.|+|-+.+++.++.|
T Consensus        54 L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStd  133 (825)
T KOG0267|consen   54 LWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTD  133 (825)
T ss_pred             cccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEecccccc
Confidence            3444444444444 8999999999999999999999999999999998874 7889999999999999999999999999


Q ss_pred             CeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         81 NLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        81 ~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..+.+||.+...+. ...+|...+..+.|+|+|++++.++.|..+++||+.
T Consensus       134 td~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~  184 (825)
T KOG0267|consen  134 TDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLT  184 (825)
T ss_pred             ccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccc
Confidence            99999999955555 666699999999999999999999999999999983

>KOG0294|consensus

Probab=99.84  E-value=3.3e-19  Score=105.50  Aligned_cols=128  Identities=19%  Similarity=0.285  Sum_probs=107.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCC--EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE--WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~--~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |+|||++....+..+ .|.+.|+++.|.++-.  .|++|+.||.+.+|+.....+ ..+.+|...|..++.+|.++..++
T Consensus        65 I~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALs  144 (362)
T KOG0294|consen   65 IHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALS  144 (362)
T ss_pred             EEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEE
Confidence            689999988888776 8999999999998765  899999999999999998875 678899999999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+.|..++.||+-.|+.-+...-......+.|+|.|.+++.+..+ .|-+|.+
T Consensus       145 Vg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~-~i~i~q~  196 (362)
T KOG0294|consen  145 VGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN-KIDIYQL  196 (362)
T ss_pred             EcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc-EEEEEec
Confidence            999999999999888877544444445558888888877776654 4666654

>KOG0289|consensus

Probab=99.84  E-value=4.4e-19  Score=108.77  Aligned_cols=125  Identities=18%  Similarity=0.284  Sum_probs=104.2

Q ss_pred             EEeCCCCceeeeecCC---CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          3 LQSVSPGRQLQQHDFS---SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      +.|.+++.++....+.   -.+.+.+|+|||..+.+|..|+.+++||+.++. ...+.+|.++|..++|+.+|.++++++
T Consensus       329 Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~a  408 (506)
T KOG0289|consen  329 FSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAA  408 (506)
T ss_pred             EEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEe
Confidence            4577788877666442   358999999999999999999999999998776 477899999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      .|+.+++||++.-+..  +.......+.+++|.+.|++|+.++.|=+|.++
T Consensus       409 dd~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~  459 (506)
T KOG0289|consen  409 DDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYIC  459 (506)
T ss_pred             cCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEE
Confidence            9999999999976655  444455579999999999999998765444443

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.84  E-value=3.1e-18  Score=98.51  Aligned_cols=112  Identities=16%  Similarity=0.265  Sum_probs=86.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEE--eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC---CeEEEeeCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVG--MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD---NLLNAWRTPY   90 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~w~~~~   90 (131)
                      ...++|.+++|+|+|..+++.  ..+..+.+||++......+.  ...+..+.|+|+|++++.++.+   |.+.+||.++
T Consensus        57 ~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~  134 (194)
T PF08662_consen   57 KKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK  134 (194)
T ss_pred             cCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence            445679999999999987554  45678999999744444443  4566789999999999988654   5699999997


Q ss_pred             CceEEecCCCCCeEEEEECCCCCEEEEecC------CCcEEEEEee
Q psy15612         91 GASIFQSKESSSVLSCDISADDKYIVTGSG------DKKATVYEVI  130 (131)
Q Consensus        91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~vw~~~  130 (131)
                      .+.+....+.. +..++|+|+|++++++..      |..++||+..
T Consensus       135 ~~~i~~~~~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~  179 (194)
T PF08662_consen  135 KKKISTFEHSD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ  179 (194)
T ss_pred             CEEeeccccCc-EEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence            77775554444 689999999999987653      6789999863

>KOG1036|consensus

Probab=99.83  E-value=6.2e-19  Score=103.86  Aligned_cols=127  Identities=13%  Similarity=0.226  Sum_probs=109.8

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      +++||....+....+.|..++.+++|.+ ...+++|+.|+.|+.+|+.++....+..|...+.++.+++....++++++|
T Consensus        37 lrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD  115 (323)
T KOG1036|consen   37 LRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWD  115 (323)
T ss_pred             EEEEeccchhhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccC
Confidence            4788888777667779999999999986 667889999999999999999998899999999999999988899999999


Q ss_pred             CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         81 NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        81 ~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|++||.+..........+..|.++..  .++.|+.|+.|+.+.+||+|
T Consensus       116 ~~ik~wD~R~~~~~~~~d~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLR  163 (323)
T KOG1036|consen  116 KTIKFWDPRNKVVVGTFDQGKKVYCMDV--SGNRLVVGTSDRKVLIYDLR  163 (323)
T ss_pred             ccEEEEeccccccccccccCceEEEEec--cCCEEEEeecCceEEEEEcc
Confidence            9999999997544444445568888876  47778888999999999996

>KOG2110|consensus

Probab=99.83  E-value=1.8e-18  Score=104.07  Aligned_cols=129  Identities=13%  Similarity=0.305  Sum_probs=107.9

Q ss_pred             CEEEeCCCCceeeee----cCCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQQH----DFSSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      |+|||+++.+.+.++    .+...+.++..++.+.+++.-+  ..|.|.+||..+-+. ..+..|++.+-+++|+++|.+
T Consensus       108 IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~l  187 (391)
T KOG2110|consen  108 IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTL  187 (391)
T ss_pred             EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCE
Confidence            689999999999887    2344577777777777887642  367899999987764 677899999999999999999


Q ss_pred             EEEeCCCCe-EEEeeCCCCceEE--ecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         74 FVSTGKDNL-LNAWRTPYGASIF--QSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        74 ~~~~~~~~~-i~~w~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +++++..|+ |+++.+.+|+.+.  ..+ ....|.+++|+|++++|.+.+..++|+++.+
T Consensus       188 lATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL  247 (391)
T KOG2110|consen  188 LATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKL  247 (391)
T ss_pred             EEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEe
Confidence            999999887 7899999999883  322 3577899999999999999999999999987

>KOG1274|consensus

Probab=99.83  E-value=8.4e-19  Score=115.30  Aligned_cols=130  Identities=19%  Similarity=0.216  Sum_probs=105.7

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eee-------cc-ccceEEEEEccC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLH-------LH-ESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~-------~~-~~~v~~~~~~~~   70 (131)
                      |++-++.+......+ +|.++|.++.|+|.+.+|++.+.||.|++|++..+.+. .+.       .. ...+..++|+|+
T Consensus       120 vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk  199 (933)
T KOG1274|consen  120 VKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPK  199 (933)
T ss_pred             EEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCC
Confidence            355666655555555 89999999999999999999999999999999987642 111       11 345667999999


Q ss_pred             CCEEEEeCCCCeEEEeeCCCCceEE---ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         71 GKWFVSTGKDNLLNAWRTPYGASIF---QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +..++....|+.|++|+..+.+..+   ...+.+.+..+.|+|+|+||++++.||.|.|||+.
T Consensus       200 ~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~  262 (933)
T KOG1274|consen  200 GGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVD  262 (933)
T ss_pred             CCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence            8888888889999999999888772   22345559999999999999999999999999974

>KOG0641|consensus

Probab=99.83  E-value=2.3e-18  Score=98.55  Aligned_cols=130  Identities=16%  Similarity=0.240  Sum_probs=112.5

Q ss_pred             CEEEeCCCCceeeeec---CC-----CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC
Q psy15612          1 MYLQSVSPGRQLQQHD---FS-----SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~---~~-----~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~   71 (131)
                      ||+||++-..++.+++   |.     ..|.+++..|.|++|++|-.|....+||++.++. +.+..|...|.++.|+|..
T Consensus       206 irfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a  285 (350)
T KOG0641|consen  206 IRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGA  285 (350)
T ss_pred             EEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCc
Confidence            6899999888887762   22     4589999999999999999999999999998885 7788999999999999999


Q ss_pred             CEEEEeCCCCeEEEeeCCCC---ceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         72 KWFVSTGKDNLLNAWRTPYG---ASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~---~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .++++++.|..|++=|++..   +..  ....|...+..+.|+|+.-.+++.+.|+++.+|-+.
T Consensus       286 ~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  286 HYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             eEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            99999999999999998731   211  556799999999999999889999999999999753

>KOG0294|consensus

Probab=99.82  E-value=7.3e-19  Score=104.07  Aligned_cols=112  Identities=18%  Similarity=0.267  Sum_probs=101.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC--EEEEeCCCCeEEEeeCCCCc
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK--WFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~i~~w~~~~~~   92 (131)
                      .|.+.+.+++.  ++.++++|+.|.+|++||+..... ..+..|.+.+.++.|.++-.  .+++++.||.|.+|+...-+
T Consensus        41 aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~  118 (362)
T KOG0294|consen   41 AHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWE  118 (362)
T ss_pred             ccccceeEEEe--cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeE
Confidence            68899999998  589999999999999999987764 66778999999999998765  89999999999999998877


Q ss_pred             eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         93 SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        93 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+ .+++|.+.|+.++.+|.+++.++.+.|+.+++||+
T Consensus       119 ~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNL  156 (362)
T KOG0294|consen  119 LLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNL  156 (362)
T ss_pred             EeeeecccccccceeEecCCCceEEEEcCCceeeeehh
Confidence            77 78889999999999999999999999999999997

>KOG1407|consensus

Probab=99.82  E-value=7.1e-19  Score=101.90  Aligned_cols=119  Identities=13%  Similarity=0.229  Sum_probs=104.2

Q ss_pred             ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612         10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      +++..+ .|+....+++|+|+|+++++|+.|..+.+||+..-.+ +.+..+.-+|..+.||-||++|++++.|..|-|=+
T Consensus       180 kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~  259 (313)
T KOG1407|consen  180 KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAE  259 (313)
T ss_pred             ccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEe
Confidence            444445 6889999999999999999999999999999987765 66778899999999999999999999999999999


Q ss_pred             CCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---------CcEEEEE
Q psy15612         88 TPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---------KKATVYE  128 (131)
Q Consensus        88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~vw~  128 (131)
                      +++|..+....+.++...++|+|...+|+-++.|         |.++++-
T Consensus       260 vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG  309 (313)
T KOG1407|consen  260 VETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFG  309 (313)
T ss_pred             cccCCeEEEeeccCCceeEEecCCCceeeEEecCCCCccccccceeEEec
Confidence            9999999888899999999999999998866543         4566664

>KOG0270|consensus

Probab=99.82  E-value=2.2e-18  Score=105.69  Aligned_cols=130  Identities=12%  Similarity=0.159  Sum_probs=109.3

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCC-CEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACG-KWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~~~~   76 (131)
                      |++||+.++++..++ .|.+.|.+++|+|. ...|++|+.|++|.+.|.+... ........+.|..++|.|.. ..+++
T Consensus       268 V~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~  347 (463)
T KOG0270|consen  268 VKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFV  347 (463)
T ss_pred             EEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEE
Confidence            689999999999998 58899999999995 6678999999999999998533 23344567889999999964 46778


Q ss_pred             eCCCCeEEEeeCCCC-ceE-EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYG-ASI-FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~-~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~  130 (131)
                      +..||.++-+|+++. +++ ....|.+.|.++++++. ..++++++.|+.+++|++.
T Consensus       348 ~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~  404 (463)
T KOG0270|consen  348 STDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD  404 (463)
T ss_pred             ecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence            889999999999975 566 77889999999999985 4467889999999999973

>KOG0275|consensus

Probab=99.81  E-value=2e-19  Score=107.48  Aligned_cols=129  Identities=11%  Similarity=0.154  Sum_probs=111.3

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++|-+++|+++..+  .|...|.++.|+.|+..+++++.|.++++.-+.++++ ..+.+|.+.|....|.+||..++++
T Consensus       287 IKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisa  366 (508)
T KOG0275|consen  287 IKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISA  366 (508)
T ss_pred             EEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEe
Confidence            689999999999988  6999999999999999999999999999999999986 6788999999999999999999999


Q ss_pred             CCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASI---FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~  129 (131)
                      +.|+++++|+..+++++   ...+....|.++..-|. ...++.+....++.+-++
T Consensus       367 SsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~  422 (508)
T KOG0275|consen  367 SSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM  422 (508)
T ss_pred             cCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec
Confidence            99999999999999988   22335567777777664 446667767777777665

>KOG1063|consensus

Probab=99.81  E-value=3.6e-19  Score=114.20  Aligned_cols=117  Identities=21%  Similarity=0.364  Sum_probs=102.0

Q ss_pred             eeecCCCCeEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612         13 QQHDFSSQIFSLGYCPSGEWLAVGMENS-----NVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW   86 (131)
Q Consensus        13 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w   86 (131)
                      +.++|...|++++.+|+++++++++...     -|++|+..+... ..+..|.-.|..++|||||+++++.++|++..+|
T Consensus       520 KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~  599 (764)
T KOG1063|consen  520 KLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLY  599 (764)
T ss_pred             HhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEee
Confidence            3458999999999999999999987644     388999887664 5688999999999999999999999999999999


Q ss_pred             eCCCCceE-----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         87 RTPYGASI-----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        87 ~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ........     ..+.|...|...+|+|++.+++++|.|.++++|..
T Consensus       600 ~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~  647 (764)
T KOG1063|consen  600 EVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEE  647 (764)
T ss_pred             eeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEec
Confidence            87544332     45679999999999999999999999999999975

>KOG1446|consensus

Probab=99.81  E-value=1.1e-17  Score=98.83  Aligned_cols=129  Identities=12%  Similarity=0.092  Sum_probs=107.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeC--CCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGME--NSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++||..+++.++++ .+...+..++|......++.++.  |.+|+..++..++ ++.+.+|...|..++.+|-+..+++
T Consensus        38 l~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS  117 (311)
T KOG1446|consen   38 LRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLS  117 (311)
T ss_pred             EEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEe
Confidence            589999999999888 55567888888766666655554  7889999998887 4778999999999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.|+++++||++..+++......+ ...++|.|+|-++|++.....|++||+|
T Consensus       118 ~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLifA~~~~~~~IkLyD~R  170 (311)
T KOG1446|consen  118 SSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIFALANGSELIKLYDLR  170 (311)
T ss_pred             cccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEEEEecCCCeEEEEEec
Confidence            9999999999999888873332222 2358899999999999887799999997

>KOG0772|consensus

Probab=99.81  E-value=5e-19  Score=110.66  Aligned_cols=129  Identities=19%  Similarity=0.259  Sum_probs=97.7

Q ss_pred             CEEEeCCCCc-eeeee------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----EEeecccc--ceEEEEE
Q psy15612          1 MYLQSVSPGR-QLQQH------DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----YQLHLHES--CVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~~-~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~--~v~~~~~   67 (131)
                      +||||+...+ .+..+      +..-.+.+++|+|+|+.++.|..||.|.+|+..+...    ..-..|..  .|.++.|
T Consensus       293 lRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~F  372 (641)
T KOG0772|consen  293 LRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISF  372 (641)
T ss_pred             EEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEe
Confidence            5899997543 23333      2234589999999999999999999999999865432    23356766  8999999


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCCceE--E--ecCCCCCeEEEEECCCCCEEEEecC------CCcEEEEEe
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYGASI--F--QSKESSSVLSCDISADDKYIVTGSG------DKKATVYEV  129 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~--~--~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~vw~~  129 (131)
                      |+||++|++-+.|+.+++||++..+..  .  -....-.-..++|||+.+++++|..      .+++.++|-
T Consensus       373 S~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~  444 (641)
T KOG0772|consen  373 SYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDR  444 (641)
T ss_pred             ccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEec
Confidence            999999999999999999999976554  1  1223445567899999999998753      356777664

>KOG0296|consensus

Probab=99.81  E-value=9.6e-18  Score=100.93  Aligned_cols=118  Identities=13%  Similarity=0.192  Sum_probs=106.9

Q ss_pred             eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612         12 LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        12 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~   89 (131)
                      +..+ .|.+.|.+++.+|+.+++++|+.|..-.+|++.++.. ..+.+|+..|.++.|+.+|.+++++..++.+.+|...
T Consensus        57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~s  136 (399)
T KOG0296|consen   57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS  136 (399)
T ss_pred             eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcc
Confidence            3445 8999999999999999999999999999999998885 6789999999999999999999999999999999999


Q ss_pred             CCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         90 YGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        90 ~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++... ........+.=+.|+|.+..++.|+.||.+=+|.+
T Consensus       137 tg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~i  177 (399)
T KOG0296|consen  137 TGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQI  177 (399)
T ss_pred             cCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEEC
Confidence            98887 44456677888999999999999999999999986

>KOG1539|consensus

Probab=99.80  E-value=7.3e-19  Score=114.76  Aligned_cols=128  Identities=16%  Similarity=0.306  Sum_probs=113.1

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      +++||..++..+..+.....+..+..+.....++.+..+-.|.++|..+.++ +.+.+|...+.+++|||||+++++++.
T Consensus       517 lkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasm  596 (910)
T KOG1539|consen  517 LKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASM  596 (910)
T ss_pred             EEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeec
Confidence            4789999888888887778888888888888888888899999999998885 778899999999999999999999999


Q ss_pred             CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC-CcEEEEE
Q psy15612         80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD-KKATVYE  128 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~vw~  128 (131)
                      |++|++||+.++..+-.......+.++.|+|+|.+|+++..| .-|.+|-
T Consensus       597 D~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWs  646 (910)
T KOG1539|consen  597 DSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWS  646 (910)
T ss_pred             CCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence            999999999999998444466778899999999999999887 5688884

>KOG0322|consensus

Probab=99.80  E-value=5.6e-19  Score=102.50  Aligned_cols=129  Identities=16%  Similarity=0.248  Sum_probs=104.7

Q ss_pred             CEEEeCCCCcee----------eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC--Ce---EEeeccccceEE
Q psy15612          1 MYLQSVSPGRQL----------QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP--DK---YQLHLHESCVLS   64 (131)
Q Consensus         1 i~iwd~~~~~~~----------~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~--~~---~~~~~~~~~v~~   64 (131)
                      +-+||+.++..+          ... .|.++|.++.+.+....=++|+.+..+..|++...  .+   ..+.-....+..
T Consensus       177 vv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~g  256 (323)
T KOG0322|consen  177 VVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSG  256 (323)
T ss_pred             EEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccc
Confidence            458999886332          222 68899999999876555567777788888988643  22   222333456788


Q ss_pred             EEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         65 LRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +...||++.++++++|+.+++|..++.+.+ .++.|.+.|.+++|+|+...++.++.|.+|.+|++
T Consensus       257 vrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  257 VRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             eEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            999999999999999999999999999999 78889999999999999999999999999999986

>KOG0643|consensus

Probab=99.80  E-value=5e-17  Score=94.68  Aligned_cols=129  Identities=11%  Similarity=0.127  Sum_probs=110.5

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC-
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK-   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-   79 (131)
                      .+|=..+|+.+.++ +|.+.|.++..+-+.+.+++|+.|.++++||.+++++.........|..+.|+++|++++.+.. 
T Consensus        35 ~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~  114 (327)
T KOG0643|consen   35 TVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDK  114 (327)
T ss_pred             eEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehh
Confidence            35666678999888 9999999999999999999999999999999999998776677889999999999998876643 


Q ss_pred             ----CCeEEEeeCCCC-------ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 ----DNLLNAWRTPYG-------ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ----~~~i~~w~~~~~-------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                          .+.+.++|++..       ++. ....+.+.+..+-|+|.++++++|..||.|..||++
T Consensus       115 ~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~  177 (327)
T KOG0643|consen  115 QMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDAR  177 (327)
T ss_pred             hcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcc
Confidence                456999998832       222 444567899999999999999999999999999985

>KOG0308|consensus

Probab=99.80  E-value=6e-18  Score=108.18  Aligned_cols=130  Identities=15%  Similarity=0.196  Sum_probs=113.2

Q ss_pred             CEEEeCCCCce--ee--------ee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEE
Q psy15612          1 MYLQSVSPGRQ--LQ--------QH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~~~--~~--------~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~   67 (131)
                      |.+||++++..  +.        .+  ++...|++++-++.|..+++|+.++-+++||.++.+ ..++.+|...|..+..
T Consensus       142 IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~  221 (735)
T KOG0308|consen  142 IFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLV  221 (735)
T ss_pred             EEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEE
Confidence            67999997722  21        11  566789999999999999999999999999999877 4778899999999999


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++||..+++++.|++|++||+...+++ ....|...++++..+|+=..+++|+.||.|..=|++
T Consensus       222 ~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~  285 (735)
T KOG0308|consen  222 NDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLR  285 (735)
T ss_pred             cCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccC
Confidence            999999999999999999999988888 666788889999999998999999999998776654

>KOG0288|consensus

Probab=99.80  E-value=2.1e-18  Score=105.13  Aligned_cols=127  Identities=18%  Similarity=0.083  Sum_probs=105.1

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      |++||+..+.+.+.+-....+..+..+  +..++++..|++|++||.++..+.....-.+.|.++..+++|..++++++|
T Consensus       285 iK~WDl~k~~C~kt~l~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRD  362 (459)
T KOG0288|consen  285 IKLWDLQKAYCSKTVLPGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRD  362 (459)
T ss_pred             hhhhhhhhhheeccccccccccceEec--ceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCC
Confidence            578999998888877566667777765  567788999999999999988875444445589999999999999999999


Q ss_pred             CeEEEeeCCCCceEE-e----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         81 NLLNAWRTPYGASIF-Q----SKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        81 ~~i~~w~~~~~~~~~-~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .++.+.|+++.+... .    ....+..+.+.|||++.|+++|+.||.|+||++
T Consensus       363 dtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v  416 (459)
T KOG0288|consen  363 DTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSV  416 (459)
T ss_pred             CceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEc
Confidence            999999999877651 1    123455889999999999999999999999986

>KOG2919|consensus

Probab=99.80  E-value=3.7e-18  Score=101.67  Aligned_cols=130  Identities=15%  Similarity=0.230  Sum_probs=105.2

Q ss_pred             CEEEeCCCCceeeee---cCCCC---eEEEEECCCCCEEEEEeCCCcEEEEeC-CCCC-e--EEe-----eccccceEEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQ---IFSLGYCPSGEWLAVGMENSNVEVLHA-LKPD-K--YQL-----HLHESCVLSL   65 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~---v~~~~~~~~~~~l~~~~~~~~v~~~~~-~~~~-~--~~~-----~~~~~~v~~~   65 (131)
                      |++||.-+|+....+   .|..+   .-+++|+|||..|+.| .+..|++||+ +.++ +  ...     .+..+-+.++
T Consensus       135 Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~  213 (406)
T KOG2919|consen  135 IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCF  213 (406)
T ss_pred             eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeee
Confidence            689999999988766   45544   4689999999999886 5578999999 4444 2  111     2346778999


Q ss_pred             EEccCCC-EEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEeeC
Q psy15612         66 RFAACGK-WFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEVIY  131 (131)
Q Consensus        66 ~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~~  131 (131)
                      +|+|... .++.++....+-++....+.++ .+.+|.+.|+.+.|.++|+.|++|+. |.+|..||+||
T Consensus       214 a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~  282 (406)
T KOG2919|consen  214 AFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRY  282 (406)
T ss_pred             eccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehh
Confidence            9999654 7888998888888888877777 67789999999999999999999886 77899999986

>KOG1332|consensus

Probab=99.80  E-value=4.6e-18  Score=97.83  Aligned_cols=129  Identities=16%  Similarity=0.192  Sum_probs=106.4

Q ss_pred             CEEEeCCCC---ceeeee-cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccC-
Q psy15612          1 MYLQSVSPG---RQLQQH-DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAAC-   70 (131)
Q Consensus         1 i~iwd~~~~---~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~-   70 (131)
                      |+|+..+..   +.+..+ +|.++|..++|..  -|.+|++++.|++|.+|.-.+++-   .....|.+.|.+++|.|. 
T Consensus        35 VkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~waphe  114 (299)
T KOG1332|consen   35 VKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHE  114 (299)
T ss_pred             EEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccc
Confidence            578888754   344555 9999999999954  599999999999999999988863   445679999999999996 


Q ss_pred             -CCEEEEeCCCCeEEEeeCCCC-ceE---EecCCCCCeEEEEECCC---C-----------CEEEEecCCCcEEEEEe
Q psy15612         71 -GKWFVSTGKDNLLNAWRTPYG-ASI---FQSKESSSVLSCDISAD---D-----------KYIVTGSGDKKATVYEV  129 (131)
Q Consensus        71 -~~~~~~~~~~~~i~~w~~~~~-~~~---~~~~~~~~v~~~~~~~~---~-----------~~l~~~~~d~~i~vw~~  129 (131)
                       |-.|++++.||.|.+.+.++. ...   ....|.-.+.+++|.|.   |           +.|++|+.|..|+||+.
T Consensus       115 ygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~  192 (299)
T KOG1332|consen  115 YGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKF  192 (299)
T ss_pred             cceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeec
Confidence             557889999999999988754 332   55678999999999986   4           56999999999999985

>KOG0293|consensus

Probab=99.80  E-value=3.4e-18  Score=104.59  Aligned_cols=126  Identities=18%  Similarity=0.203  Sum_probs=103.4

Q ss_pred             EEeCCCCce---eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccceEEEEEccCCCEEEE
Q psy15612          3 LQSVSPGRQ---LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         3 iwd~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~   76 (131)
                      +|++.....   ..++ +|..+|..+.||||.+++++++.+..+.+||+.++......  ++...+.+++|.|||..+++
T Consensus       250 iw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~  329 (519)
T KOG0293|consen  250 IWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVT  329 (519)
T ss_pred             EEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEe
Confidence            566543332   3444 89999999999999999999999999999999999874433  34578899999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |+.|+.+..||+. |...  ........|.+++.++||+++++.+.|..+++++.
T Consensus       330 Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~  383 (519)
T KOG0293|consen  330 GSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNR  383 (519)
T ss_pred             cCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeech
Confidence            9999999999987 4433  22334578999999999999999999999999875

>KOG1445|consensus

Probab=99.79  E-value=5.7e-19  Score=113.27  Aligned_cols=115  Identities=19%  Similarity=0.248  Sum_probs=100.5

Q ss_pred             cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC--------eEEeeccccceEEEEEccC-CCEEEEeCCCCeEEE
Q psy15612         16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD--------KYQLHLHESCVLSLRFAAC-GKWFVSTGKDNLLNA   85 (131)
Q Consensus        16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~   85 (131)
                      -....|..+.|.| |...|+.++.|+.|++|.+..+-        ...+..|...|+++.|+|- ...+++++.|.+|++
T Consensus       625 ~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~l  704 (1012)
T KOG1445|consen  625 FNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIEL  704 (1012)
T ss_pred             ccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeee
Confidence            3456689999999 78889999999999999986442        1346789999999999995 457889999999999


Q ss_pred             eeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         86 WRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        86 w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ||+++++.. .+.+|.+.|..++|||+|+.+++.+.||+++||+.+
T Consensus       705 WDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Pr  750 (1012)
T KOG1445|consen  705 WDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPR  750 (1012)
T ss_pred             eehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCC
Confidence            999998887 788999999999999999999999999999999864

>KOG1273|consensus

Probab=99.79  E-value=6.9e-18  Score=100.30  Aligned_cols=98  Identities=18%  Similarity=0.215  Sum_probs=87.8

Q ss_pred             eecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612         14 QHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        14 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      ++.+.. ..++.|++.|.+|++|..+|.+.+||+.+... +.+.+|..+|.+++||+||+.++++++|..+.+||+..|.
T Consensus        20 tld~~~-a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs   98 (405)
T KOG1273|consen   20 TLDNPL-AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS   98 (405)
T ss_pred             eccCCc-cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCC
Confidence            344444 78999999999999999999999999998886 5678899999999999999999999999999999999999


Q ss_pred             eEEecCCCCCeEEEEECCCC
Q psy15612         93 SIFQSKESSSVLSCDISADD  112 (131)
Q Consensus        93 ~~~~~~~~~~v~~~~~~~~~  112 (131)
                      ++......++|....|+|..
T Consensus        99 ~l~rirf~spv~~~q~hp~k  118 (405)
T KOG1273|consen   99 PLKRIRFDSPVWGAQWHPRK  118 (405)
T ss_pred             ceeEEEccCccceeeecccc
Confidence            88777788999999999853

>KOG1036|consensus

Probab=99.79  E-value=1.5e-17  Score=98.06  Aligned_cols=114  Identities=17%  Similarity=0.161  Sum_probs=104.0

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIF   95 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~   95 (131)
                      .....|.++.|+|.+..|+.++.||.+++|+...........|..++.+++|.+ ...+++++-|+.|+.+|+.++....
T Consensus        11 pP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~   89 (323)
T KOG1036|consen   11 PPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQ   89 (323)
T ss_pred             CChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCCccee
Confidence            346789999999999999999999999999999887766677899999999987 5678899999999999999999988


Q ss_pred             ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         96 QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ...|...+.++..++....+++|+.|++|++||.|
T Consensus        90 igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R  124 (323)
T KOG1036|consen   90 IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPR  124 (323)
T ss_pred             eccCCCceEEEEeeccCCeEEEcccCccEEEEecc
Confidence            88999999999999988889999999999999986

>KOG0300|consensus

Probab=99.78  E-value=3.7e-18  Score=101.85  Aligned_cols=114  Identities=14%  Similarity=0.235  Sum_probs=102.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +|.+.|.+..|-..|+.+++++.|.+..+||+++++. ..+.+|..+...+.-+|..+.++++++|.+.++||.+..-..
T Consensus       270 gH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~s  349 (481)
T KOG0300|consen  270 GHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQS  349 (481)
T ss_pred             ccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcce
Confidence            7999999999999999999999999999999999996 667899999999999999999999999999999999843332


Q ss_pred             --EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 --FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 --~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                        ...+|...|++..|..+.+ +++++.|++|++||++
T Consensus       350 V~VFQGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLr  386 (481)
T KOG0300|consen  350 VAVFQGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLR  386 (481)
T ss_pred             eeeecccccceeEEEEecCCc-eeecCCCceEEEeeec
Confidence              6788999999999987765 7799999999999986

>KOG4283|consensus

Probab=99.78  E-value=1.3e-17  Score=98.45  Aligned_cols=115  Identities=15%  Similarity=0.131  Sum_probs=98.8

Q ss_pred             cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccC---CCEEEEeCCCCeEEEeeCCCC
Q psy15612         16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC---GKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      .|.-.|.++.|-| |..++.+++.|.++++||..+.+.......++.|++-+|+|-   -..++++.++-.+++.|+.+|
T Consensus        99 ~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG  178 (397)
T KOG4283|consen   99 GHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG  178 (397)
T ss_pred             cceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCC
Confidence            3556799999988 566888899999999999998887655667788999999983   345778888999999999999


Q ss_pred             ceE-EecCCCCCeEEEEECCCCCE-EEEecCCCcEEEEEee
Q psy15612         92 ASI-FQSKESSSVLSCDISADDKY-IVTGSGDKKATVYEVI  130 (131)
Q Consensus        92 ~~~-~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~~  130 (131)
                      ... .+.+|.+.|.++.|+|...+ |++|+.||.+++||+|
T Consensus       179 s~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiR  219 (397)
T KOG4283|consen  179 SFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIR  219 (397)
T ss_pred             cceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEee
Confidence            988 78899999999999998886 5789999999999997

>KOG0268|consensus

Probab=99.78  E-value=2.2e-18  Score=103.82  Aligned_cols=130  Identities=15%  Similarity=0.182  Sum_probs=107.2

Q ss_pred             CEEEeCCCCceeeeecC-CCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQHDF-SSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |.|||.+-..++..+.. ...+.++.|+|-.. .|++++.|+.+.+||++.....+-..-......++|+|.+-.|.+++
T Consensus       169 i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~  248 (433)
T KOG0268|consen  169 IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAAN  248 (433)
T ss_pred             eeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeecc
Confidence            46888877777777743 35689999999766 56777799999999999887533333344567899999888899999


Q ss_pred             CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|..++.+|++.-+..  ...+|.+.|..++|||.|+.+++||.|.+|+++.++
T Consensus       249 ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~  302 (433)
T KOG0268|consen  249 EDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVN  302 (433)
T ss_pred             ccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecC
Confidence            9999999999876554  677899999999999999999999999999999864

>KOG2394|consensus

Probab=99.78  E-value=2.7e-18  Score=107.83  Aligned_cols=92  Identities=16%  Similarity=0.272  Sum_probs=82.4

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-E
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-F   95 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~   95 (131)
                      ++.|...+|+|||++|++.+.|+.+++||..+.++ ..+...-+...|++|||||++|++|++|..+.+|.+..++.+ .
T Consensus       290 ~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVAR  369 (636)
T KOG2394|consen  290 EGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVAR  369 (636)
T ss_pred             cccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEe
Confidence            45789999999999999999999999999988775 334556678999999999999999999999999999988888 6


Q ss_pred             ecCCCCCeEEEEEC
Q psy15612         96 QSKESSSVLSCDIS  109 (131)
Q Consensus        96 ~~~~~~~v~~~~~~  109 (131)
                      -.+|.+.|..++|.
T Consensus       370 GqGHkSWVs~VaFD  383 (636)
T KOG2394|consen  370 GQGHKSWVSVVAFD  383 (636)
T ss_pred             ccccccceeeEeec
Confidence            67899999999998

>KOG2096|consensus

Probab=99.77  E-value=1.7e-17  Score=98.86  Aligned_cols=125  Identities=26%  Similarity=0.404  Sum_probs=97.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC---CCC------eEEeeccccceEEEEEccC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL---KPD------KYQLHLHESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~---~~~------~~~~~~~~~~v~~~~~~~~   70 (131)
                      |.+||++ |+.+..+ ..+..-...+.+|+|+++++++....|.+|++-   .+.      ...+.+|.+.|..++|+++
T Consensus       211 i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~  289 (420)
T KOG2096|consen  211 ICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNS  289 (420)
T ss_pred             EEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCC
Confidence            5689999 8888887 455567788899999999999998899999873   222      2457899999999999999


Q ss_pred             CCEEEEeCCCCeEEEeeCC-------------CC---------ceE--------------------------------Ee
Q psy15612         71 GKWFVSTGKDNLLNAWRTP-------------YG---------ASI--------------------------------FQ   96 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~-------------~~---------~~~--------------------------------~~   96 (131)
                      ...+++.+.||..++||+.             .+         +++                                ..
T Consensus       290 S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e  369 (420)
T KOG2096|consen  290 STRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELE  369 (420)
T ss_pred             cceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHH
Confidence            9999999999999999943             01         000                                00


Q ss_pred             cCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         97 SKESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        97 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      ..|...|.+++|+++|+++++++ |+.+++.
T Consensus       370 ~~h~~~Is~is~~~~g~~~atcG-dr~vrv~  399 (420)
T KOG2096|consen  370 DIHSTTISSISYSSDGKYIATCG-DRYVRVI  399 (420)
T ss_pred             HhhcCceeeEEecCCCcEEeeec-ceeeeee
Confidence            03567789999999999988865 5666664

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.77  E-value=2e-16  Score=96.28  Aligned_cols=128  Identities=12%  Similarity=0.099  Sum_probs=97.3

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEccCCCEEEEe-
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAACGKWFVST-   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~-   77 (131)
                      |++||..+++.+..+.....+..+.|+|+++.+ +++..++.+.+||..+++... +..+ ..+..+.|+|+++.++++ 
T Consensus        13 v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~   91 (300)
T TIGR03866        13 ISVIDTATLEVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSG-PDPELFALHPNGKILYIAN   91 (300)
T ss_pred             EEEEECCCCceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCC-CCccEEEECCCCCEEEEEc
Confidence            578999999888877555557789999999876 566778899999998877533 3333 335678999999977654 


Q ss_pred             CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC-cEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK-KATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~vw~~  129 (131)
                      +.++.+.+||+.+++.+........+..++|+|+++++++++.++ .+.+||.
T Consensus        92 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~  144 (300)
T TIGR03866        92 EDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDT  144 (300)
T ss_pred             CCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeC
Confidence            568899999999877664334445578899999999998887764 4566675

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0646|consensus

Probab=99.77  E-value=2e-17  Score=102.13  Aligned_cols=129  Identities=16%  Similarity=0.222  Sum_probs=104.8

Q ss_pred             EEEeCCCCceeee-ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQ-HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      .+|.+........ .-.++.|.+++-+|.|.+++.|...+.+++|.+.++.+ ..+.+|-..|.++.|+.||.+|++++.
T Consensus        64 ~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgsk  143 (476)
T KOG0646|consen   64 HVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSK  143 (476)
T ss_pred             cccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCC
Confidence            4566654443332 25678899999999999999998999999999999996 456789999999999999999999999


Q ss_pred             CCeEEEeeCC---------CCceE-EecCCCCCeEEEEECCC--CCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTP---------YGASI-FQSKESSSVLSCDISAD--DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~---------~~~~~-~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.+.+|.+.         +.+.. ....|.-.|+.+...+.  ..++++++.|+++++||+-
T Consensus       144 Dg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS  206 (476)
T KOG0646|consen  144 DGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLS  206 (476)
T ss_pred             CccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEec
Confidence            9999999753         12223 45678888998887764  4578999999999999973

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.76  E-value=5.3e-16  Score=94.46  Aligned_cols=130  Identities=12%  Similarity=0.062  Sum_probs=96.4

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++||..+++....+.....+..+.++|+++.++++ ..++.+.+||+.+.+..........+..++|+|+|+.+++++.
T Consensus        55 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~  134 (300)
T TIGR03866        55 IQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSE  134 (300)
T ss_pred             EEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEec
Confidence            578999988887766434446778999999977654 5578999999987664332233345678999999999988877


Q ss_pred             CC-eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEee
Q psy15612         80 DN-LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEVI  130 (131)
Q Consensus        80 ~~-~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~  130 (131)
                      ++ .+..||..+++..........+..++|+|++++++.+ ..++.+.+||+.
T Consensus       135 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~  187 (300)
T TIGR03866       135 TTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVA  187 (300)
T ss_pred             CCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcC
Confidence            64 4677898877765333334456789999999988654 458999999974

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0299|consensus

Probab=99.76  E-value=1.7e-17  Score=102.29  Aligned_cols=129  Identities=14%  Similarity=0.205  Sum_probs=114.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |.|||.++.+.++.+ +|.+.|.+++|-.....+++++.|..+++|++.... +..+.+|+..|..+.-...++.+.+++
T Consensus       226 v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGg  305 (479)
T KOG0299|consen  226 VQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGG  305 (479)
T ss_pred             EEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEecc
Confidence            469999999999997 999999999999888899999999999999998665 467889999999998888899999999


Q ss_pred             CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|+++++|.+.....+...++.+.+-|++|-.+ ..+++|+.+|.|.+|++.
T Consensus       306 rDrT~rlwKi~eesqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~  356 (479)
T KOG0299|consen  306 RDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLL  356 (479)
T ss_pred             ccceeEEEeccccceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeec
Confidence            999999999976666677778889999998754 568899999999999974

>KOG1063|consensus

Probab=99.76  E-value=3.1e-17  Score=105.54  Aligned_cols=129  Identities=17%  Similarity=0.228  Sum_probs=107.3

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-----EEeeccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-----YQLHLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~   74 (131)
                      |++|++.+-.....+ .|.-.|..++|||||++|++.+.|.++.+|.......     .....|..-|.++.|+|++.+|
T Consensus       554 I~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~F  633 (764)
T KOG1063|consen  554 IRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYF  633 (764)
T ss_pred             EEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCccccee
Confidence            689998876666655 8999999999999999999999999999999854432     2356799999999999999999


Q ss_pred             EEeCCCCeEEEeeCCCC--ceE---EecCCCCCeEEEEECCC-----CCEEEEecCCCcEEEEEe
Q psy15612         75 VSTGKDNLLNAWRTPYG--ASI---FQSKESSSVLSCDISAD-----DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~--~~~---~~~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~vw~~  129 (131)
                      +++|+|.++.+|...+.  +.+   ....+...|+.+++.|-     +..++.|-+.|.|.+|..
T Consensus       634 aTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~  698 (764)
T KOG1063|consen  634 ATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRR  698 (764)
T ss_pred             EEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEec
Confidence            99999999999998877  333   34567899999998762     236678888999999973

>KOG2111|consensus

Probab=99.76  E-value=2.7e-16  Score=93.38  Aligned_cols=95  Identities=9%  Similarity=0.260  Sum_probs=82.8

Q ss_pred             EeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEEeCCCCe-EEEeeCCCCceEE---ecCCCCCeEEEEE
Q psy15612         36 GMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVSTGKDNL-LNAWRTPYGASIF---QSKESSSVLSCDI  108 (131)
Q Consensus        36 ~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-i~~w~~~~~~~~~---~~~~~~~v~~~~~  108 (131)
                      |..-|.|.+-|+...+.   ..+.+|.+.|.|++.+.+|..++++|..|+ |++||..+|..+.   .......+.+++|
T Consensus       155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaF  234 (346)
T KOG2111|consen  155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAF  234 (346)
T ss_pred             CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEe
Confidence            44568899999986665   667899999999999999999999999887 8999999999882   2235688999999


Q ss_pred             CCCCCEEEEecCCCcEEEEEee
Q psy15612        109 SADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       109 ~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ||++.+++.+|..|+++|+.++
T Consensus       235 Sp~~s~LavsSdKgTlHiF~l~  256 (346)
T KOG2111|consen  235 SPNSSWLAVSSDKGTLHIFSLR  256 (346)
T ss_pred             CCCccEEEEEcCCCeEEEEEee
Confidence            9999999999999999999875

>KOG1034|consensus

Probab=99.76  E-value=2.5e-17  Score=98.20  Aligned_cols=115  Identities=17%  Similarity=0.258  Sum_probs=100.0

Q ss_pred             cCCCCeEEEEECCC----CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC-CEEEEeCCCCeEEEeeCC
Q psy15612         16 DFSSQIFSLGYCPS----GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        16 ~~~~~v~~~~~~~~----~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~   89 (131)
                      ++.+..+.++|+-+    ..+++.++.-|.|++.|..+.++ ..+.+|...|..+++.|+. +++++++.|..+++|+++
T Consensus        87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~  166 (385)
T KOG1034|consen   87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ  166 (385)
T ss_pred             CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence            36677788888643    45788888999999999998886 5678999999999999964 578899999999999999


Q ss_pred             CCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         90 YGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        90 ~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +..++    -..+|.+.|.++.|+++|.++++++.|.++++|++.
T Consensus       167 ~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~  211 (385)
T KOG1034|consen  167 TDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLN  211 (385)
T ss_pred             CCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecC
Confidence            99988    234699999999999999999999999999999974

>KOG0299|consensus

Probab=99.76  E-value=3e-17  Score=101.25  Aligned_cols=115  Identities=15%  Similarity=0.238  Sum_probs=102.6

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-----------------Ee--eccccceEEEEEccCCCEEEE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-----------------QL--HLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-----------------~~--~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      .|.-.+.+++++|+.++.++++.+++|.-|+..++...                 +.  ..|...+.+++.++||+++++
T Consensus       140 ~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylat  219 (479)
T KOG0299|consen  140 KHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLAT  219 (479)
T ss_pred             cccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEe
Confidence            78889999999999999999999999999998766511                 01  256778999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.|+.+.||+.++.+.+ ...+|.+.|.+++|-.....+++++.|+.+++|++.
T Consensus       220 gg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~  274 (479)
T KOG0299|consen  220 GGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSID  274 (479)
T ss_pred             cCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehh
Confidence            999999999999999998 668899999999999888889999999999999974

>KOG2106|consensus

Probab=99.75  E-value=2.8e-16  Score=98.42  Aligned_cols=125  Identities=19%  Similarity=0.269  Sum_probs=106.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      +++|+  ..+.+.......++.++.|+|.| .++.|...|...+.|.++....++....+++.+++|+|+|.+++.++.|
T Consensus       392 v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d  468 (626)
T KOG2106|consen  392 VRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHD  468 (626)
T ss_pred             EEEcc--CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCC
Confidence            47888  56666666677889999999999 9999999999999999997766665568899999999999999999999


Q ss_pred             CeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         81 NLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        81 ~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +.|++|.+......   ..+-+.+.+..+.|++|++++.+-+.|..|..|.
T Consensus       469 ~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~  519 (626)
T KOG2106|consen  469 NHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWK  519 (626)
T ss_pred             CeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence            99999988754443   2333569999999999999999999999999994

>KOG2096|consensus

Probab=99.75  E-value=1e-16  Score=95.63  Aligned_cols=114  Identities=14%  Similarity=0.184  Sum_probs=96.5

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC---CCce
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP---YGAS   93 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~---~~~~   93 (131)
                      |...+..+-....+.+|++++.|..|.+|++++..+..+......-+..+.||+|+++++++....+++|.+-   +|..
T Consensus       186 h~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~f  265 (420)
T KOG2096|consen  186 HQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTF  265 (420)
T ss_pred             cccceEEEeecCCceEEEEecCCCcEEEEecCCceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcch
Confidence            4455666777777889999999999999999966667777777777889999999999999999999999853   3432


Q ss_pred             E------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         94 I------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        94 ~------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .      .+.+|.+.|...+|+++++.+++.+.||+.++||..
T Consensus       266 qev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd  308 (420)
T KOG2096|consen  266 QEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD  308 (420)
T ss_pred             hhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence            2      567899999999999999999999999999999863

>KOG1188|consensus

Probab=99.75  E-value=8.1e-17  Score=96.35  Aligned_cols=130  Identities=9%  Similarity=0.152  Sum_probs=103.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe---EEeeccc-cceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK---YQLHLHE-SCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~-~~v~~~~~~~~~~~   73 (131)
                      |++||..+++.+..+ .++..++.++|..  .+..+.+++.||.|++||++....   ....+++ .+..+++.+-.++.
T Consensus        52 v~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~i  131 (376)
T KOG1188|consen   52 VRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNI  131 (376)
T ss_pred             EEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCe
Confidence            689999999988888 7888888899966  466788999999999999987653   2334444 35566766656777


Q ss_pred             EEEeCC----CCeEEEeeCCCCce-E--EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGK----DNLLNAWRTPYGAS-I--FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~----~~~i~~w~~~~~~~-~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++++..    +-.+.+||++..+. +  ....|...|+++.|+|. .++|++|+.||.+.++|+.
T Consensus       132 i~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~  196 (376)
T KOG1188|consen  132 IACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK  196 (376)
T ss_pred             EEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence            877643    45699999998776 3  55679999999999995 6789999999999999974

>KOG0641|consensus

Probab=99.74  E-value=6.1e-16  Score=88.73  Aligned_cols=128  Identities=17%  Similarity=0.220  Sum_probs=106.8

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec-------cccceEEEEEccCCC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL-------HESCVLSLRFAACGK   72 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~-------~~~~v~~~~~~~~~~   72 (131)
                      ++-|-..|+....+ +|.+.|.++. +=++.++++|+.|.+|++||++-..+ ..+..       ..+.|..++..|.|+
T Consensus       166 y~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgr  244 (350)
T KOG0641|consen  166 YITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGR  244 (350)
T ss_pred             EEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcc
Confidence            44466677777777 8888887763 33688999999999999999987664 22211       235788999999999


Q ss_pred             EEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         73 WFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .++++..|....+||++.++.+ ...+|...|.++.|+|...++++++.|.+|++=|++
T Consensus       245 ll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlq  303 (350)
T KOG0641|consen  245 LLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ  303 (350)
T ss_pred             eeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence            9999999999999999988887 677899999999999999999999999999998875

>KOG0973|consensus

Probab=99.74  E-value=1.7e-16  Score=105.90  Aligned_cols=80  Identities=23%  Similarity=0.373  Sum_probs=72.8

Q ss_pred             ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612         10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      ++...+ +|...|..++|+|++.++++++.|++|.+|+..+.+. ..+.+|.+.|-.+.|.|-|++|++-+.|+++++|+
T Consensus       120 k~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwr  199 (942)
T KOG0973|consen  120 KVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWR  199 (942)
T ss_pred             eEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEE
Confidence            344555 8999999999999999999999999999999998875 66789999999999999999999999999999998


Q ss_pred             CC
Q psy15612         88 TP   89 (131)
Q Consensus        88 ~~   89 (131)
                      +.
T Consensus       200 t~  201 (942)
T KOG0973|consen  200 TS  201 (942)
T ss_pred             cc
Confidence            44

>KOG1009|consensus

Probab=99.74  E-value=3.1e-17  Score=99.89  Aligned_cols=114  Identities=18%  Similarity=0.297  Sum_probs=99.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC--------C-----CC---e-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL--------K-----PD---K-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~--------~-----~~---~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      .|...|+.+.|+|+|..|++|+.++.+.+|...        +     .+   . ..+.+|...++.++|+|++.++++++
T Consensus        63 ~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s  142 (434)
T KOG1009|consen   63 RHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGS  142 (434)
T ss_pred             CCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeee
Confidence            788999999999999999999999999999776        2     11   1 33467889999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      -|+.+++||+..|... ....|..-+..++|.|.++++++-+.|+..++.++
T Consensus       143 ~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~  194 (434)
T KOG1009|consen  143 VDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSA  194 (434)
T ss_pred             ccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeee
Confidence            9999999999999998 67789999999999999999999888886655544

>KOG1007|consensus

Probab=99.74  E-value=1.7e-16  Score=93.50  Aligned_cols=128  Identities=16%  Similarity=0.181  Sum_probs=102.1

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEcc-CCCEE
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAA-CGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~~   74 (131)
                      ++.||+++.++...+  .|...|..+.|+|+.+ .|++++.|+.|++||.+..+  +..+..|...+.+++|+| ..+.+
T Consensus       195 l~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLi  274 (370)
T KOG1007|consen  195 LQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLI  274 (370)
T ss_pred             EEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEE
Confidence            468999988877766  7888999999999866 56889999999999998766  467888999999999999 47788


Q ss_pred             EEeCCCCeEEEeeCCCCc------------------------------eEEecCCCCCeEEEEECCCCCE-EEEecCCCc
Q psy15612         75 VSTGKDNLLNAWRTPYGA------------------------------SIFQSKESSSVLSCDISADDKY-IVTGSGDKK  123 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~------------------------------~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~  123 (131)
                      ++++.|..+.+|....-.                              ......|...|++++|+....+ +++.+.||.
T Consensus       275 Ls~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGR  354 (370)
T KOG1007|consen  275 LSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGR  354 (370)
T ss_pred             EecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCce
Confidence            899999999998743211                              0012247889999999976665 578899998


Q ss_pred             EEEEE
Q psy15612        124 ATVYE  128 (131)
Q Consensus       124 i~vw~  128 (131)
                      +.|=.
T Consensus       355 viIs~  359 (370)
T KOG1007|consen  355 VIISS  359 (370)
T ss_pred             EEeec
Confidence            87643

>KOG1332|consensus

Probab=99.74  E-value=2.7e-17  Score=94.70  Aligned_cols=129  Identities=22%  Similarity=0.258  Sum_probs=104.8

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCC-C---eEEeeccccceEEEEEccC-
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKP-D---KYQLHLHESCVLSLRFAAC-   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~-~---~~~~~~~~~~v~~~~~~~~-   70 (131)
                      |.||.-++++-.+..   .|...|++++|.|.  |-.|++++.||.|.+.+.... .   ......|...+.++.|.|- 
T Consensus        82 VIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~  161 (299)
T KOG1332|consen   82 VIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPAS  161 (299)
T ss_pred             EEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcC
Confidence            457776766443333   68899999999986  668899999999999988755 2   1335778999999999985 


Q ss_pred             --C-----------CEEEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCC----CEEEEecCCCcEEEEEe
Q psy15612         71 --G-----------KWFVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISADD----KYIVTGSGDKKATVYEV  129 (131)
Q Consensus        71 --~-----------~~~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~vw~~  129 (131)
                        |           +.|++++.|+.+++|...+++..   .+.+|.+.|+.++|.|.-    .++++++.||++.||..
T Consensus       162 ~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~  240 (299)
T KOG1332|consen  162 APGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTK  240 (299)
T ss_pred             CCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEe
Confidence              4           56999999999999999887654   577899999999999963    46899999999999964

>KOG2055|consensus

Probab=99.74  E-value=2.8e-16  Score=97.27  Aligned_cols=131  Identities=11%  Similarity=0.184  Sum_probs=103.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceE--EEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVL--SLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~~   78 (131)
                      |.+....+++.+..+..++.|..+.|+.+++.|+..+.+|.|.+||++...+.......+.+.  .++.+++|+++++|+
T Consensus       327 I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS  406 (514)
T KOG2055|consen  327 IHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGS  406 (514)
T ss_pred             EEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEecc
Confidence            345566778888888889999999999999999999999999999999988755444444444  566678999999999


Q ss_pred             CCCeEEEeeCCC------CceEEe------------------------------------------------cCCCCCeE
Q psy15612         79 KDNLLNAWRTPY------GASIFQ------------------------------------------------SKESSSVL  104 (131)
Q Consensus        79 ~~~~i~~w~~~~------~~~~~~------------------------------------------------~~~~~~v~  104 (131)
                      ..|.+.|||..+      .+++..                                                ...-+.++
T Consensus       407 ~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vt  486 (514)
T KOG2055|consen  407 DSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVT  486 (514)
T ss_pred             CcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceE
Confidence            999999999431      111100                                                01236689


Q ss_pred             EEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612        105 SCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus       105 ~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      |++|+|.+.+++.|..+|++.+|.+.+
T Consensus       487 c~aFSP~sG~lAvGNe~grv~l~kL~h  513 (514)
T KOG2055|consen  487 CMAFSPNSGYLAVGNEAGRVHLFKLHH  513 (514)
T ss_pred             EEEecCCCceEEeecCCCceeeEeecc
Confidence            999999999999999999999999863

>KOG1272|consensus

Probab=99.74  E-value=1.3e-17  Score=103.21  Aligned_cols=129  Identities=11%  Similarity=0.135  Sum_probs=113.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      +++|| ..|..+..+....+|..+.|-|---+|++++..|.+.--|+.++++ ..+....+.+..+.-+|-...+-.|..
T Consensus       193 ~yvYD-~~GtElHClk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~Ghs  271 (545)
T KOG1272|consen  193 VYVYD-NNGTELHCLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHS  271 (545)
T ss_pred             EEEec-CCCcEEeehhhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCC
Confidence            46777 4577888887778899999999888899999999999999998885 445556677888888998888999999


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|++.+|.....+.+ ....|.+.|.++++.++|+|+++++.|+.++|||+|
T Consensus       272 nGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR  323 (545)
T KOG1272|consen  272 NGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLR  323 (545)
T ss_pred             CceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeec
Confidence            999999999888887 777899999999999999999999999999999997

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.73  E-value=7.7e-16  Score=98.32  Aligned_cols=130  Identities=17%  Similarity=0.115  Sum_probs=93.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||...........+...+..+.|+|||+.|+..+.+   ..|.+||+.+++...+.........++|+|||+.++.+
T Consensus       186 i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~  265 (429)
T PRK01742        186 VRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFA  265 (429)
T ss_pred             EEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEE
Confidence            467787644433333677789999999999999887643   46999999887654444333444578999999988775


Q ss_pred             -CCCCeEE--EeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612         78 -GKDNLLN--AWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI  130 (131)
Q Consensus        78 -~~~~~i~--~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~  130 (131)
                       +.++.+.  +||+.+++...+..+...+....|+|+|+.++.++ .++...+|++.
T Consensus       266 ~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~  322 (429)
T PRK01742        266 SSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMS  322 (429)
T ss_pred             EecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence             4566554  45776666655555666788999999999876554 57788888763

>KOG1273|consensus

Probab=99.73  E-value=4.8e-16  Score=92.60  Aligned_cols=130  Identities=15%  Similarity=0.228  Sum_probs=102.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Ee--e-------ccc----------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QL--H-------LHE----------   59 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~--~-------~~~----------   59 (131)
                      |-|||+.|...-+.+ .|..+|.+++||++|++|++++.|..+.+||+..+.+. ++  .       -|+          
T Consensus        47 vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~  126 (405)
T KOG1273|consen   47 VVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATI  126 (405)
T ss_pred             EEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEE
Confidence            468999988766666 89999999999999999999999999999999876531 10  0       000          


Q ss_pred             ---------------------------cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECC
Q psy15612         60 ---------------------------SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISA  110 (131)
Q Consensus        60 ---------------------------~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~  110 (131)
                                                 ....+..|.+.|+++++|...|.+.+++..+-+++  +.......|.++.++.
T Consensus       127 ~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~  206 (405)
T KOG1273|consen  127 MEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSR  206 (405)
T ss_pred             ecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEec
Confidence                                       00011236677899999999999999999988887  2323347899999999


Q ss_pred             CCCEEEEecCCCcEEEEEee
Q psy15612        111 DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       111 ~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.++.-+.|+.|+.|++.
T Consensus       207 ~g~~liiNtsDRvIR~ye~~  226 (405)
T KOG1273|consen  207 KGRFLIINTSDRVIRTYEIS  226 (405)
T ss_pred             cCcEEEEecCCceEEEEehh
Confidence            99999999999999999874

>KOG0301|consensus

Probab=99.73  E-value=5.2e-16  Score=100.04  Aligned_cols=123  Identities=20%  Similarity=0.300  Sum_probs=102.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++|.-  ++.++++ +|...|..+++-|++. +++++.||.|++|++.+..+....+|.+.++++...+++..+++++.
T Consensus       163 IklWk~--~~~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gE  239 (745)
T KOG0301|consen  163 IKLWKG--GTLLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVSTGE  239 (745)
T ss_pred             eeeccC--CchhhhhccchhheeeeEEecCCC-eEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEEecC
Confidence            567764  6677777 8999999999987664 56888999999999977777889999999999998889999999999


Q ss_pred             CCeEEEeeCCCCceEEecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         80 DNLLNAWRTPYGASIFQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |+++++|+..  ++..... +...++++.+-++|. +++|+.||.|+||..
T Consensus       240 DrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~  287 (745)
T KOG0301|consen  240 DRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTV  287 (745)
T ss_pred             CceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEe
Confidence            9999999976  5543333 445899999988888 567788999999965

>KOG0303|consensus

Probab=99.73  E-value=2.1e-16  Score=96.36  Aligned_cols=129  Identities=12%  Similarity=0.167  Sum_probs=102.7

Q ss_pred             CEEEeCCCC-------ceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCC
Q psy15612          1 MYLQSVSPG-------RQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~   71 (131)
                      |.+|++..+       +.+..+ +|..+|..++|+|. .+.|++++.|..|.+|++.+++......|...|.++.|+-||
T Consensus       106 v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dG  185 (472)
T KOG0303|consen  106 VMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDG  185 (472)
T ss_pred             EEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCC
Confidence            568887543       334444 89999999999996 557889999999999999999853333499999999999999


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceEE-ecCC-CCCeEEEEECCCCCEEEEec---CCCcEEEEEe
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASIF-QSKE-SSSVLSCDISADDKYIVTGS---GDKKATVYEV  129 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~l~~~~---~d~~i~vw~~  129 (131)
                      +++++.+.|..|++||.++++.+. ...| +.....+-|-.++..+.+|-   .++++-+||.
T Consensus       186 s~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp  248 (472)
T KOG0303|consen  186 SLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDP  248 (472)
T ss_pred             ceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCc
Confidence            999999999999999999999883 3344 34556677888888555553   3678999975

>KOG2048|consensus

Probab=99.73  E-value=1.8e-15  Score=97.23  Aligned_cols=129  Identities=16%  Similarity=0.136  Sum_probs=106.7

Q ss_pred             CEEEeCCCCceeee-e--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQ-H--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |.||+++.+-.... +  +....|.+++|++ +..|.+.+.+|.|.-||+.+.+. ..+....+.+.+++.+|.+..++.
T Consensus        49 IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~I  127 (691)
T KOG2048|consen   49 IEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAI  127 (691)
T ss_pred             EEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEe
Confidence            56899887644433 2  4556799999995 55667777899999999988875 566777889999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.||.+..++...++..   .+....+++.+++|+|++..+++|+.||.|++||+.
T Consensus       128 gcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~  184 (691)
T KOG2048|consen  128 GCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVK  184 (691)
T ss_pred             ecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcC
Confidence            999998888888877766   344567999999999999999999999999999974

>KOG0290|consensus

Probab=99.72  E-value=1.6e-16  Score=93.60  Aligned_cols=129  Identities=11%  Similarity=0.141  Sum_probs=100.5

Q ss_pred             EEEeCCCCce---eee-ecCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeEEe----eccccceEEEEEccC-C
Q psy15612          2 YLQSVSPGRQ---LQQ-HDFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKYQL----HLHESCVLSLRFAAC-G   71 (131)
Q Consensus         2 ~iwd~~~~~~---~~~-~~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~----~~~~~~v~~~~~~~~-~   71 (131)
                      -|||++++..   ... +.|..+|..++|...+. .+++.+.||.+++||++..+-.++    .....+...++|++. .
T Consensus       176 TiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDp  255 (364)
T KOG0290|consen  176 TIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDP  255 (364)
T ss_pred             EEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCc
Confidence            4899998743   233 39999999999998655 678899999999999987764322    222456778999884 5


Q ss_pred             CEEEEeCCC-CeEEEeeCCCCceE--EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612         72 KWFVSTGKD-NLLNAWRTPYGASI--FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~~~~~~~~-~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++-..| ..+.+.|++.....  .+..|.+.|..++|.|.. ..+.+++.|.++.+||+.
T Consensus       256 nymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~  318 (364)
T KOG0290|consen  256 NYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQ  318 (364)
T ss_pred             hHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecc
Confidence            567765554 56889999976654  677899999999999964 578899999999999985

>KOG0301|consensus

Probab=99.71  E-value=2.9e-16  Score=101.19  Aligned_cols=117  Identities=15%  Similarity=0.283  Sum_probs=100.0

Q ss_pred             Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612          9 GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus         9 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      +++...+ +|+..|.++..-|++ .+++|+.|.+|++|.- ......+.+|...|+.+++-++ ..|++++.|+.|+.|+
T Consensus       130 ~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~-~~~l~tf~gHtD~VRgL~vl~~-~~flScsNDg~Ir~w~  206 (745)
T KOG0301|consen  130 GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG-GTLLKTFSGHTDCVRGLAVLDD-SHFLSCSNDGSIRLWD  206 (745)
T ss_pred             hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC-CchhhhhccchhheeeeEEecC-CCeEeecCCceEEEEe
Confidence            3444445 899999999999987 7889999999999988 3335678899999999999875 4578999999999999


Q ss_pred             CCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         88 TPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        88 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      + +|+++ ...+|...+.+++..+++..++++++|+++++|+.
T Consensus       207 ~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~  248 (745)
T KOG0301|consen  207 L-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKK  248 (745)
T ss_pred             c-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeec
Confidence            9 56666 78899999999998888899999999999999974

>KOG1445|consensus

Probab=99.71  E-value=5e-17  Score=104.58  Aligned_cols=129  Identities=15%  Similarity=0.202  Sum_probs=101.9

Q ss_pred             CEEEeCCCC-------ceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccC
Q psy15612          1 MYLQSVSPG-------RQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~   70 (131)
                      |++|-++.+       +....+ .|.+.|.++.|+| ....|++++.|.+|++||+.+... ..+.+|...|.+++|||+
T Consensus       652 i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpd  731 (1012)
T KOG1445|consen  652 INLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPD  731 (1012)
T ss_pred             EEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCC
Confidence            578887643       222334 7889999999999 466788999999999999998875 678999999999999999


Q ss_pred             CCEEEEeCCCCeEEEeeCCCCceEEecC---CCCCeEEEEECCCCCEEEEecCC----CcEEEEEe
Q psy15612         71 GKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISADDKYIVTGSGD----KKATVYEV  129 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d----~~i~vw~~  129 (131)
                      |+.+++.+.|+++++|+.++++.....+   .+.+-..+.|.-+|++++..+-|    +++.+||.
T Consensus       732 Gr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~A  797 (1012)
T KOG1445|consen  732 GRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDA  797 (1012)
T ss_pred             CcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhh
Confidence            9999999999999999999877652222   23444567788899988776544    46777764

>KOG0771|consensus

Probab=99.71  E-value=4.6e-16  Score=95.01  Aligned_cols=128  Identities=15%  Similarity=0.194  Sum_probs=104.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---------------------------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---------------------------   52 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---------------------------   52 (131)
                      +|+|+..+...+... .|...|.++.|+|||++|++.+.+ ..++|+..++..                           
T Consensus       168 lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l  246 (398)
T KOG0771|consen  168 LRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETL  246 (398)
T ss_pred             EEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceE
Confidence            588997766666555 889999999999999999999988 799999876610                           


Q ss_pred             --EE------------ee--------------ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCC
Q psy15612         53 --YQ------------LH--------------LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSS  102 (131)
Q Consensus        53 --~~------------~~--------------~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~  102 (131)
                        ..            +.              .....+.+++.+++|++++.++.+|.+.+++..+-+..  ....|...
T Consensus       247 ~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~  326 (398)
T KOG0771|consen  247 RLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGF  326 (398)
T ss_pred             EEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheee
Confidence              00            00              01236789999999999999999999999999887776  45569999


Q ss_pred             eEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612        103 VLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       103 v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |+.+.|+|+.+++++.+.|....+..+
T Consensus       327 VT~ltF~Pdsr~~~svSs~~~~~v~~l  353 (398)
T KOG0771|consen  327 VTGLTFSPDSRYLASVSSDNEAAVTKL  353 (398)
T ss_pred             eeeEEEcCCcCcccccccCCceeEEEE
Confidence            999999999999998888887777654

>KOG2055|consensus

Probab=99.70  E-value=1.1e-15  Score=94.62  Aligned_cols=129  Identities=17%  Similarity=0.291  Sum_probs=105.3

Q ss_pred             CEEEeCCCCceeeee---cCC-CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFS-SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~-~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      ++.||+++.+..+.-   +++ ..+...+.+|++++|+..+.+|.|.+....+++...-..-.+.+..++|+.|++.++.
T Consensus       282 ~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~  361 (514)
T KOG2055|consen  282 LYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLA  361 (514)
T ss_pred             EEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEE
Confidence            368999988766543   333 3577888999999999999999999999998886544456778999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceEEecCCCCCe--EEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         77 TGKDNLLNAWRTPYGASIFQSKESSSV--LSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++.+|.|++||++...++......+.+  ++++.++++.++++|+..|.|.|||.
T Consensus       362 ~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~  416 (514)
T KOG2055|consen  362 SGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDG  416 (514)
T ss_pred             EcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEecc
Confidence            999999999999988777433333333  56777899999999999999999985

>KOG3881|consensus

Probab=99.70  E-value=2.2e-15  Score=91.64  Aligned_cols=130  Identities=10%  Similarity=0.108  Sum_probs=110.1

Q ss_pred             CEEEeCCCCceeeee----------cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEE
Q psy15612          1 MYLQSVSPGRQLQQH----------DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLR   66 (131)
Q Consensus         1 i~iwd~~~~~~~~~~----------~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~   66 (131)
                      +++||+++.+.+..-          ..+-.+.++.|-|.  ...++++..-+.+++||.+.++.  ..+.-.+..+.++.
T Consensus       175 lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~  254 (412)
T KOG3881|consen  175 LKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTG  254 (412)
T ss_pred             eeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeee
Confidence            579999987665432          12234578888877  78899999999999999987663  55566678899999


Q ss_pred             EccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         67 FAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        67 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..|+++.++++..-+.+..||.+.++..  ...+..+.+.++..+|.++++++++-|+.++|+|+.
T Consensus       255 l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~k  320 (412)
T KOG3881|consen  255 LTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIK  320 (412)
T ss_pred             ecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecc
Confidence            9999999999999999999999999988  477889999999999999999999999999999974

>KOG2048|consensus

Probab=99.69  E-value=6.4e-15  Score=94.81  Aligned_cols=128  Identities=20%  Similarity=0.253  Sum_probs=104.2

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEEe
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      --||+.+++....+ ...+.|.+++.+|.+..++.|+.||.+..++....++   ..+...++.+.+++|+|++..++.|
T Consensus        93 ~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~G  172 (691)
T KOG2048|consen   93 TEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGG  172 (691)
T ss_pred             EEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEec
Confidence            46999999988888 5667899999999999999999999777777777765   2345567899999999999999999


Q ss_pred             CCCCeEEEeeCCCCceEE-----ecC----CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGASIF-----QSK----ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~~-----~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|+.|++||..++..+.     ...    ..-.|+++.+-.++ .+++|...|+|++||..
T Consensus       173 s~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~  233 (691)
T KOG2048|consen  173 SIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSI  233 (691)
T ss_pred             ccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEccc
Confidence            999999999999888763     111    23446777777554 47788889999999964

>KOG1009|consensus

Probab=99.68  E-value=3.1e-15  Score=91.38  Aligned_cols=115  Identities=17%  Similarity=0.298  Sum_probs=96.3

Q ss_pred             cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC-------e---EEeeccccceEEEEEccCCCEEEEeCCCCeEE
Q psy15612         16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD-------K---YQLHLHESCVLSLRFAACGKWFVSTGKDNLLN   84 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~-------~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~   84 (131)
                      ....++.++.|.++.. .+++|+.|..+++|-+....       +   ..+..|...|..+.|+|+|..+++++.++.+.
T Consensus        11 H~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~   90 (434)
T KOG1009|consen   11 HDHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVF   90 (434)
T ss_pred             cCCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEE
Confidence            3557899999998776 99999999999999876432       1   23567999999999999999999999999999


Q ss_pred             EeeCC--------C------CceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         85 AWRTP--------Y------GASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        85 ~w~~~--------~------~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|-..        +      ...+   .+.+|...+..++|+|+++++++++.|..+++||++
T Consensus        91 lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~  153 (434)
T KOG1009|consen   91 LWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVH  153 (434)
T ss_pred             EEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEec
Confidence            99655        2      1122   345688999999999999999999999999999985

>KOG1310|consensus

Probab=99.68  E-value=5.5e-16  Score=98.26  Aligned_cols=115  Identities=16%  Similarity=0.214  Sum_probs=98.0

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EE-eeccccceEEEEEccC--CCEEEEeCCCCeEEEeeCCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQ-LHLHESCVLSLRFAAC--GKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~-~~~~~~~v~~~~~~~~--~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      +|++.|++++|+.+|.+|++|+.|..+.+||....+. .. -.+|...|.+++|-|.  .+.++++..|..|+++|+...
T Consensus        48 GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~  127 (758)
T KOG1310|consen   48 GHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSS  127 (758)
T ss_pred             cccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccc
Confidence            8999999999999999999999999999999986664 33 3689999999999994  567889999999999998742


Q ss_pred             ceE-----------EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612         92 ASI-----------FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        92 ~~~-----------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~  130 (131)
                      +.-           ....|...|..++-.|++ ..+.++++||+++-+|+|
T Consensus       128 ~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiR  178 (758)
T KOG1310|consen  128 KEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIR  178 (758)
T ss_pred             cccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeeccc
Confidence            211           233477889999999988 678899999999999987

>KOG1034|consensus

Probab=99.68  E-value=2.3e-15  Score=89.99  Aligned_cols=89  Identities=19%  Similarity=0.287  Sum_probs=80.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCeEE----eeccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDKYQ----LHLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~   74 (131)
                      ||+.|..+++....+ +|...|+.+.++|+. +++++++.|..|++|++.+..+..    ..+|...|.++.|+++|.+|
T Consensus       117 IrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i  196 (385)
T KOG1034|consen  117 IRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRI  196 (385)
T ss_pred             EEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCee
Confidence            688899888888877 999999999999974 678899999999999999988643    35799999999999999999


Q ss_pred             EEeCCCCeEEEeeCC
Q psy15612         75 VSTGKDNLLNAWRTP   89 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~   89 (131)
                      ++++.|..+.+|++.
T Consensus       197 ~ScGmDhslk~W~l~  211 (385)
T KOG1034|consen  197 ASCGMDHSLKLWRLN  211 (385)
T ss_pred             eccCCcceEEEEecC
Confidence            999999999999976

>KOG1539|consensus

Probab=99.68  E-value=9.5e-15  Score=96.07  Aligned_cols=128  Identities=20%  Similarity=0.251  Sum_probs=111.1

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc-ccceEEEEEccCCCEE-EEe
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH-ESCVLSLRFAACGKWF-VST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~-~~~   77 (131)
                      +++|++++++.+.++ ++...|.++.-+|.=..++.|..+|+|.+++++..+......+ .+.|..+.|.-||+.+ +++
T Consensus       184 lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~  263 (910)
T KOG1539|consen  184 LQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASG  263 (910)
T ss_pred             EEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEec
Confidence            479999999999999 7889999999999888999999999999999999987444444 5999999999999865 556


Q ss_pred             CCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         78 GKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +..|.+.+||+...+..  ....|.+.+....|-|....+++++.|..+++|=
T Consensus       264 ~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~v  316 (910)
T KOG1539|consen  264 RSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWV  316 (910)
T ss_pred             cCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEE
Confidence            66789999999987776  4557888999999999999999999999999883

>KOG2919|consensus

Probab=99.68  E-value=2.8e-15  Score=89.64  Aligned_cols=130  Identities=17%  Similarity=0.250  Sum_probs=98.7

Q ss_pred             CEEEeC-CCCceee---ee-----cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEcc
Q psy15612          1 MYLQSV-SPGRQLQ---QH-----DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~-~~~~~~~---~~-----~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~   69 (131)
                      |+++|+ +.|+-..   ++     +..+-+.+++|+|. .+.++.++....+-++.-.... +..+.+|.+.|..+.|.+
T Consensus       181 irvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~e  260 (406)
T KOG2919|consen  181 IRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCE  260 (406)
T ss_pred             EEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEecc
Confidence            678888 5554322   22     23567899999995 5588999998888888876665 456678999999999999


Q ss_pred             CCCEEEEeCC-CCeEEEeeCCCCceE--EecCCCC-CeEEEE--ECCCCCEEEEecCCCcEEEEEee
Q psy15612         70 CGKWFVSTGK-DNLLNAWRTPYGASI--FQSKESS-SVLSCD--ISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 ~~~~~~~~~~-~~~i~~w~~~~~~~~--~~~~~~~-~v~~~~--~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|+.+.++++ +..|..||++..+.+  .+..|.. .-..+-  ..|++++|++|+.||.|++||+.
T Consensus       261 dGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk  327 (406)
T KOG2919|consen  261 DGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLK  327 (406)
T ss_pred             CcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecC
Confidence            9999999877 667999999976554  3333433 333444  46899999999999999999974

>KOG0270|consensus

Probab=99.67  E-value=1.2e-15  Score=94.04  Aligned_cols=115  Identities=11%  Similarity=0.115  Sum_probs=94.5

Q ss_pred             cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEccC-CCEEEEeCCCCeEEEeeCCCCc
Q psy15612         16 DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAAC-GKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        16 ~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      +|...|.++.|+.. ...|++|+.|.+|.+||+.++++.. +..|...|.++.|+|. ...+++|+.|+++.+.|.+...
T Consensus       241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~  320 (463)
T KOG0270|consen  241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPS  320 (463)
T ss_pred             cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcc
Confidence            46677888888775 5578999999999999999999844 5558889999999996 5678999999999999999644


Q ss_pred             eE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         93 SI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        93 ~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      .. ..-...+.|-.++|.|... .++++..||+++-+|+|
T Consensus       321 ~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R  360 (463)
T KOG0270|consen  321 NSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIR  360 (463)
T ss_pred             ccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecC
Confidence            44 4445678899999999765 45677789999999987

>KOG0321|consensus

Probab=99.67  E-value=1.2e-15  Score=97.74  Aligned_cols=115  Identities=17%  Similarity=0.230  Sum_probs=88.4

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCC-CEEEEeCCCCeEEEeeCCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~   91 (131)
                      .|...|..+.|-|....|++++.|.+++.||+.+..+   ....+|...+.+++|.|.. ..|++|++|+.+.+||++..
T Consensus        98 aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n  177 (720)
T KOG0321|consen   98 AHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCN  177 (720)
T ss_pred             cccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEecc
Confidence            6888999999999777889999999999999998875   3368899999999999964 57889999999999997632


Q ss_pred             ceE----------------------------EecCCCCCeEE---EEECCCCCEEEEecC-CCcEEEEEee
Q psy15612         92 ASI----------------------------FQSKESSSVLS---CDISADDKYIVTGSG-DKKATVYEVI  130 (131)
Q Consensus        92 ~~~----------------------------~~~~~~~~v~~---~~~~~~~~~l~~~~~-d~~i~vw~~~  130 (131)
                      ..-                            ..+.+...+.+   +-+..|...|++++. |+.|+||||+
T Consensus       178 ~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLR  248 (720)
T KOG0321|consen  178 GVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLR  248 (720)
T ss_pred             chhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeec
Confidence            200                            00112333333   344456677777776 9999999996

>KOG1007|consensus

Probab=99.67  E-value=2.7e-15  Score=88.55  Aligned_cols=128  Identities=18%  Similarity=0.251  Sum_probs=99.4

Q ss_pred             CEEEeCCCCce-eeee------cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe-EE-eeccccceEEEEEcc
Q psy15612          1 MYLQSVSPGRQ-LQQH------DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK-YQ-LHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~-~~~~------~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~-~~-~~~~~~~v~~~~~~~   69 (131)
                      |.+|+++.+.. ...+      ++.....+-+|+|  +++.+++. .++++..||+++... .. ...|...+.++.|+|
T Consensus       146 i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNp  224 (370)
T KOG1007|consen  146 IVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNP  224 (370)
T ss_pred             eEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCC
Confidence            46888876544 2222      3445677888988  67787775 578999999997764 22 356888899999999


Q ss_pred             CCC-EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612         70 CGK-WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        70 ~~~-~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~  129 (131)
                      +.+ ++++++.|+.+++||.+..+..  .+.+|...+.++.|+|. .+++++++.|..|.+|..
T Consensus       225 nkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca  288 (370)
T KOG1007|consen  225 NKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA  288 (370)
T ss_pred             CceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence            866 5678899999999999976655  67789999999999995 456788999999988864

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=2.7e-14  Score=91.52  Aligned_cols=129  Identities=15%  Similarity=0.086  Sum_probs=94.9

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE-E
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV-S   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~   76 (131)
                      |.++|...........+...+...+|+|||+.|+..+.   +..|.+||+.+++...+..+...+....|+|||+.++ +
T Consensus       184 l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~  263 (435)
T PRK05137        184 LAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMS  263 (435)
T ss_pred             EEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEE
Confidence            34667654444434467788999999999999887653   4679999999888777766777778899999999875 4


Q ss_pred             eCCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CC--cEEEEEe
Q psy15612         77 TGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DK--KATVYEV  129 (131)
Q Consensus        77 ~~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~vw~~  129 (131)
                      .+.++  .|+++|+.+++...+..+........|+|+|+.++..+. ++  .|.++|+
T Consensus       264 ~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~  321 (435)
T PRK05137        264 LSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA  321 (435)
T ss_pred             EecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence            45444  477789888877655556666778999999998876653 33  4555554

>KOG4378|consensus

Probab=99.66  E-value=4.3e-15  Score=93.28  Aligned_cols=128  Identities=16%  Similarity=0.240  Sum_probs=102.5

Q ss_pred             EEeCCCCceeeeecC--CCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccC-CCEEEE
Q psy15612          3 LQSVSPGRQLQQHDF--SSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAAC-GKWFVS   76 (131)
Q Consensus         3 iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~-~~~~~~   76 (131)
                      |-.+.++.....+.+  ...|.-+.++|..+++ .+++.+|.|.+||..+...  .....|..+...++|+|. ...|++
T Consensus       147 ih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vs  226 (673)
T KOG4378|consen  147 IHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVS  226 (673)
T ss_pred             EEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEE
Confidence            445555555555543  3456789999987765 5688999999999986654  345679999999999995 456778


Q ss_pred             eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .+.|..|.+||.+..+.........+...++|+++|.+|+.|...|.+..||+|
T Consensus       227 VG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R  280 (673)
T KOG4378|consen  227 VGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMR  280 (673)
T ss_pred             ecccceEEEeecccccccceeeecCCcceeeecCCceEEEeecCCceEEEEecc
Confidence            899999999999976666555567788899999999999999999999999987

>KOG1274|consensus

Probab=99.66  E-value=1.1e-14  Score=96.46  Aligned_cols=127  Identities=18%  Similarity=0.228  Sum_probs=103.2

Q ss_pred             EEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      +|....++.-..+ ...-++..++++.+|++++.|+.|-.|++.+..... ...+.+|.++|.++.|+|++.++++.+.|
T Consensus        80 ~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~d  159 (933)
T KOG1274|consen   80 RYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCD  159 (933)
T ss_pred             EeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecC
Confidence            4444444444334 455678899999999999999999999999987554 57788999999999999999999999999


Q ss_pred             CeEEEeeCCCCceE-EecC--------CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         81 NLLNAWRTPYGASI-FQSK--------ESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        81 ~~i~~w~~~~~~~~-~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |.+++||+.++... .+.+        ....+..++|+|++..++..+.|+.|++|+.
T Consensus       160 G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r  217 (933)
T KOG1274|consen  160 GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSR  217 (933)
T ss_pred             ceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEcc
Confidence            99999999988776 2211        2455688999999888888888999999874

>KOG4378|consensus

Probab=99.66  E-value=2.4e-15  Score=94.35  Aligned_cols=130  Identities=14%  Similarity=0.197  Sum_probs=106.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc--ccceEEEEEccCCCEE-EE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH--ESCVLSLRFAACGKWF-VS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~-~~   76 (131)
                      |+|||++.+.+.+.+ +|+..|.++.++-...+|++++..|.|.+..+.++....-..+  ...+.-+.|+|..+.+ .+
T Consensus       103 Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~  182 (673)
T KOG4378|consen  103 VKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSI  182 (673)
T ss_pred             eeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEe
Confidence            689999966666666 8999999999999999999999999999999988876433333  3456789999987754 56


Q ss_pred             eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      ++.+|.+.+||.......  ....|..+...++|+|... ++++.+.|.+|.+||++
T Consensus       183 asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~  239 (673)
T KOG4378|consen  183 ASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR  239 (673)
T ss_pred             eccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecc
Confidence            788999999999866655  5667999999999999655 66888999999999975

>KOG1523|consensus

Probab=99.66  E-value=1e-14  Score=86.99  Aligned_cols=128  Identities=13%  Similarity=0.145  Sum_probs=104.6

Q ss_pred             EEEeCCCCc---eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-CCC---eEEeeccccceEEEEEccCCCE
Q psy15612          2 YLQSVSPGR---QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL-KPD---KYQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         2 ~iwd~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~-~~~---~~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      .||.....+   ...++ .|...|+.++|+|..+.|++++.|..-++|... .+.   ...+..+.....++.|+|.++.
T Consensus        35 hiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enk  114 (361)
T KOG1523|consen   35 HIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENK  114 (361)
T ss_pred             EEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCce
Confidence            455554333   44555 788999999999999999999999999999984 333   2456678889999999999999


Q ss_pred             EEEeCCCCeEEEeeCCCCceE-----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI-----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |++++..+.|.+|-.+...--     ..++..+.|.+++|+|++-+++.|+.|++.+|+..
T Consensus       115 FAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSa  175 (361)
T KOG1523|consen  115 FAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSA  175 (361)
T ss_pred             EEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEE
Confidence            999999999999987644332     34457899999999999999999999999999864

>KOG2394|consensus

Probab=99.66  E-value=3.2e-15  Score=94.37  Aligned_cols=113  Identities=20%  Similarity=0.345  Sum_probs=87.8

Q ss_pred             CCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCC-----C---------eE---------------EeeccccceEEEEE
Q psy15612         18 SSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKP-----D---------KY---------------QLHLHESCVLSLRF   67 (131)
Q Consensus        18 ~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~-----~---------~~---------------~~~~~~~~v~~~~~   67 (131)
                      ...|.+++|-|.+. .++.+-.+|.+.++|..-.     .         ..               ...-....|..++|
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F  298 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF  298 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence            36799999988544 5566677888998865311     0         00               01112346788999


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|||+++++.++|+.++|||..+.+.+ ..+..-+...|++|||||+++++|++|.-|.||.+.
T Consensus       299 S~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~  362 (636)
T KOG2394|consen  299 SPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE  362 (636)
T ss_pred             cCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEec
Confidence            999999999999999999999887776 455556788999999999999999999999999863

>KOG1408|consensus

Probab=99.65  E-value=4.1e-15  Score=97.02  Aligned_cols=128  Identities=20%  Similarity=0.236  Sum_probs=102.5

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEe
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      -+||.+..+.-..+ .+...+.+++|+++|+++++|.  ....+++|++.... +..+..|+-.+.|++|+|.++++++.
T Consensus        61 Vlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~kyvvSV  140 (1080)
T KOG1408|consen   61 VLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKYVVSV  140 (1080)
T ss_pred             EEEcccccchhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhhccccceeeeecCCCcEEEee
Confidence            46676655544444 6777999999999999999985  56679999998655 46778899999999999999999876


Q ss_pred             CC--CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GK--DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~--~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.  |-.+.+||++.........-.+.|..++|+.+|.|+++.+ ++.|++|.+.
T Consensus       141 GsQHDMIVnv~dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~g-nrHvk~wyl~  194 (1080)
T KOG1408|consen  141 GSQHDMIVNVNDWRVNSSGASNKISSVVSAVAFSEDGSYFVTSG-NRHVKLWYLQ  194 (1080)
T ss_pred             ccccceEEEhhhhhhcccccccccceeEEEEEEccCCceeeeee-eeeEEEEEee
Confidence            54  4457889987554445555678899999999999998875 5789999885

>KOG4328|consensus

Probab=99.65  E-value=1.7e-15  Score=93.73  Aligned_cols=130  Identities=12%  Similarity=0.086  Sum_probs=101.4

Q ss_pred             CEEEeCCCCce----eeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCeE---EeeccccceEEEEEccCC
Q psy15612          1 MYLQSVSPGRQ----LQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDKY---QLHLHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~~----~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~   71 (131)
                      |-+||+.+.+.    +..+ .|.++|.++.|+|. ...+++.+.||+++.-|+++....   ........+..+.|+.+.
T Consensus       212 VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~  291 (498)
T KOG4328|consen  212 VGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAES  291 (498)
T ss_pred             EEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCC
Confidence            45899953222    2222 78899999999995 557889999999999999887642   233345567788898888


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      +.++.+..-|.+.+||.+++...  ...-|...|.+++++|... ++++++.|++++|||+|
T Consensus       292 ~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R  353 (498)
T KOG4328|consen  292 RSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLR  353 (498)
T ss_pred             ccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehh
Confidence            87778877779999999987664  4555777999999999655 57899999999999986

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.64  E-value=1.8e-13  Score=85.93  Aligned_cols=129  Identities=24%  Similarity=0.363  Sum_probs=104.7

Q ss_pred             CEEEeCCC-Cceeeee-cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCC-eEEeeccccceEEEEEccCCC-EEE
Q psy15612          1 MYLQSVSP-GRQLQQH-DFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGK-WFV   75 (131)
Q Consensus         1 i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~~~   75 (131)
                      +++||... ......+ .|...+..+.|+|++..++.++. ++.+.+|+..... ...+..|...+.+++|+|++. .++
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  215 (466)
T COG2319         136 VKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIA  215 (466)
T ss_pred             EEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEE
Confidence            46888887 5555555 88899999999999998888875 9999999998755 455666899999999999998 555


Q ss_pred             EeCCCCeEEEeeCCCCceEE--ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDNLLNAWRTPYGASIF--QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.|+.+.+||...+....  ...|.... ...|+|++..+++++.|+.+++|++.
T Consensus       216 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~  271 (466)
T COG2319         216 SGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLR  271 (466)
T ss_pred             EecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeec
Confidence            55899999999988776664  45565554 33899999888899999999999985

>KOG0771|consensus

Probab=99.64  E-value=6.9e-15  Score=89.99  Aligned_cols=107  Identities=24%  Similarity=0.335  Sum_probs=89.6

Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE------
Q psy15612         22 FSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI------   94 (131)
Q Consensus        22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~------   94 (131)
                      ..++|+++|..+++++.||.+++|+..+.. ......|..+|.++.|+|||+.+++-+.| ..++|+..+|..+      
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            789999999999999999999999965544 56678899999999999999999999988 8899998877211      


Q ss_pred             ------------------------EecC-------------------------CCCCeEEEEECCCCCEEEEecCCCcEE
Q psy15612         95 ------------------------FQSK-------------------------ESSSVLSCDISADDKYIVTGSGDKKAT  125 (131)
Q Consensus        95 ------------------------~~~~-------------------------~~~~v~~~~~~~~~~~l~~~~~d~~i~  125 (131)
                                              ...+                         ....+++++.+++|++++.|+.||.|.
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa  306 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA  306 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence                                    0000                         023688999999999999999999999


Q ss_pred             EEEe
Q psy15612        126 VYEV  129 (131)
Q Consensus       126 vw~~  129 (131)
                      +++.
T Consensus       307 i~~~  310 (398)
T KOG0771|consen  307 IYDA  310 (398)
T ss_pred             EEEe
Confidence            9875

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.64  E-value=9.8e-14  Score=88.76  Aligned_cols=129  Identities=16%  Similarity=0.093  Sum_probs=92.4

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe---CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM---ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |.++|...........+...+...+|+|||+.|+..+   .+..+.++++.+++...+...........|+|||+.++..
T Consensus       181 l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~  260 (429)
T PRK03629        181 LRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFA  260 (429)
T ss_pred             EEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEE
Confidence            3566766444444446667899999999999988654   2356889999888765555444555678999999988754


Q ss_pred             -CCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612         78 -GKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus        78 -~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~  129 (131)
                       +.++  .|++||+.+++...+......+....|+|+|+.++..+. ++...+|.+
T Consensus       261 ~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~  316 (429)
T PRK03629        261 LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKV  316 (429)
T ss_pred             EcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEE
Confidence             4344  588999988877655555567788999999998876654 455566643

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.64  E-value=4.7e-14  Score=90.35  Aligned_cols=128  Identities=13%  Similarity=0.045  Sum_probs=92.1

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS-   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-   76 (131)
                      |.+||...........+...+....|+|||+.|+..+.   ...+.+|++.+++...+....+......|+|||+.++. 
T Consensus       186 l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~  265 (433)
T PRK04922        186 LQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALT  265 (433)
T ss_pred             EEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEE
Confidence            45778764444444466778999999999999988764   34699999988877666555555668899999997754 


Q ss_pred             eCCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEE
Q psy15612         77 TGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVYE  128 (131)
Q Consensus        77 ~~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~  128 (131)
                      .+.++  .|++||+.+++...+..+.......+|+|+|++++..+. ++...+|.
T Consensus       266 ~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~  320 (433)
T PRK04922        266 LSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYR  320 (433)
T ss_pred             EeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEE
Confidence            44444  599999988876655555555677899999998876653 45544443

>KOG1963|consensus

Probab=99.63  E-value=5.2e-14  Score=92.75  Aligned_cols=114  Identities=23%  Similarity=0.368  Sum_probs=100.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC--CC---eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK--PD---KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~--~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~   90 (131)
                      .|.-.+.+.+++|.++.++++..||.|.+|.-..  ..   ...+.-|..+|.++.|+++|.++++|++.+.+.+|.+.+
T Consensus       203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T  282 (792)
T KOG1963|consen  203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET  282 (792)
T ss_pred             hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence            4666689999999999999999999999996543  22   456778999999999999999999999999999999999


Q ss_pred             CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         91 GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++..++..-++.|..+.++||+.+.+....|.+|.+-..
T Consensus       283 ~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~  321 (792)
T KOG1963|consen  283 GKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA  321 (792)
T ss_pred             CCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence            997788888999999999999999988888999887643

>KOG1523|consensus

Probab=99.63  E-value=2.4e-14  Score=85.41  Aligned_cols=113  Identities=18%  Similarity=0.220  Sum_probs=100.4

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeC-CCC
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT-PYG   91 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~-~~~   91 (131)
                      ..++|++.+|++|+..++.+..+..+.+|...+..    ...+..|...+..+.|+|..+.|++++.|+.-++|.. ..+
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~   88 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG   88 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence            45789999999999999999999999999987766    2567889999999999999999999999999999998 444


Q ss_pred             ceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         92 ASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        92 ~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +..   .+..++....++.|+|.++.+++|+..+.|.||.+
T Consensus        89 ~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~  129 (361)
T KOG1523|consen   89 TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYY  129 (361)
T ss_pred             eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEE
Confidence            443   67778999999999999999999999999999875

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.63  E-value=1.2e-13  Score=88.33  Aligned_cols=129  Identities=18%  Similarity=0.169  Sum_probs=90.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+.+++........+....+.|+|||+.|+.. ..++  .|.+||+.++....+..+...+....|+|||+.++..
T Consensus       225 i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~  304 (429)
T PRK03629        225 LVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYT  304 (429)
T ss_pred             EEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEE
Confidence            467888877655444444556678999999988765 3344  5888999988877766666677889999999988766


Q ss_pred             CCC-C--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612         78 GKD-N--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV  129 (131)
Q Consensus        78 ~~~-~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~  129 (131)
                      +.+ +  .++.+|+.+++...............|+|+|++++..+.+   ..+.+||+
T Consensus       305 s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl  362 (429)
T PRK03629        305 SDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL  362 (429)
T ss_pred             eCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEEC
Confidence            543 3  4555577766655433344455678999999998765543   34667775

>KOG0307|consensus

Probab=99.62  E-value=2.3e-15  Score=101.33  Aligned_cols=116  Identities=15%  Similarity=0.240  Sum_probs=89.4

Q ss_pred             cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEe--eccccceEEEEEccC-CCEEEEeCCCCeEEEeeCCC
Q psy15612         16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQL--HLHESCVLSLRFAAC-GKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~   90 (131)
                      .|.+.|..+.|++... .|++|+.+|.|.+||+...+. ...  ......|.+++|+.. .+.|++++.++...|||++.
T Consensus       114 ~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~  193 (1049)
T KOG0307|consen  114 KHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRK  193 (1049)
T ss_pred             ccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccC
Confidence            7999999999999755 999999999999999987553 222  235678999999975 44577888888999999998


Q ss_pred             CceE-EecC--CCCCeEEEEECCCCC-EEEEecCCC---cEEEEEeeC
Q psy15612         91 GASI-FQSK--ESSSVLSCDISADDK-YIVTGSGDK---KATVYEVIY  131 (131)
Q Consensus        91 ~~~~-~~~~--~~~~v~~~~~~~~~~-~l~~~~~d~---~i~vw~~~~  131 (131)
                      .+.+ .+..  ....+..++|+|+.. .+++++.|.   .|.+||+||
T Consensus       194 ~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~  241 (1049)
T KOG0307|consen  194 KKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRF  241 (1049)
T ss_pred             CCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccc
Confidence            7666 2222  235588999999754 566666543   599999986

>KOG2106|consensus

Probab=99.62  E-value=8.6e-14  Score=87.58  Aligned_cols=120  Identities=15%  Similarity=0.169  Sum_probs=98.3

Q ss_pred             CCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612          7 SPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW   86 (131)
Q Consensus         7 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w   86 (131)
                      +++..+..++|..+...++.+|+..++++++.|+.+++|+  ..++.--..-..+..++.|+|.| .++.+...|.-.+.
T Consensus       357 ~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~  433 (626)
T KOG2106|consen  357 ENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVL  433 (626)
T ss_pred             cCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEE
Confidence            3444555568888999999999999999999999999999  22322222234567899999999 89999999999999


Q ss_pred             eCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         87 RTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |.++...+.....++.+.+++|+|+|.+++.|+.|+.|.+|.+
T Consensus       434 d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~V  476 (626)
T KOG2106|consen  434 DTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRV  476 (626)
T ss_pred             ecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEE
Confidence            9998666644444899999999999999999999999999875

>KOG1408|consensus

Probab=99.62  E-value=2.8e-14  Score=93.24  Aligned_cols=111  Identities=14%  Similarity=0.253  Sum_probs=101.5

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eee---ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLH---LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      ..++.|+..|..+++++++.|..|++|++.+++.. .+.   .|++....+...|.|.++++.+.|.++.++|.-+|+++
T Consensus       597 tTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcv  676 (1080)
T KOG1408|consen  597 TTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECV  676 (1080)
T ss_pred             ceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhh
Confidence            45899999999999999999999999999998863 333   46677888999999999999999999999999999999


Q ss_pred             -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                       ...+|...|+.+.|.+|.+.|++.+.||.|.||.+
T Consensus       677 A~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~l  712 (1080)
T KOG1408|consen  677 AQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKL  712 (1080)
T ss_pred             hhhcCcchheeeeeecccchhheeecCCceEEEEEC
Confidence             78899999999999999999999999999999986

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=1.4e-13  Score=88.23  Aligned_cols=129  Identities=13%  Similarity=0.084  Sum_probs=93.4

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCCc--EEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENSN--VEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~--v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+.+++......+.+.+....|+|||+.|+. .+.++.  |.++|+.++....+..+........|+|||+.++..
T Consensus       228 i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~  307 (435)
T PRK05137        228 VYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFE  307 (435)
T ss_pred             EEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEE
Confidence            57899988877654466677888999999998764 444444  777799888877777666667789999999988766


Q ss_pred             CC-C--CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612         78 GK-D--NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV  129 (131)
Q Consensus        78 ~~-~--~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~  129 (131)
                      +. +  ..++++|..+++..........+....|+|+|+.++..+.+   ..+.+||+
T Consensus       308 s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~  365 (435)
T PRK05137        308 SDRSGSPQLYVMNADGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKP  365 (435)
T ss_pred             ECCCCCCeEEEEECCCCCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEEC
Confidence            53 3  35888888776655443345556678899999998776543   24666664

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=2e-13  Score=87.37  Aligned_cols=128  Identities=13%  Similarity=0.059  Sum_probs=88.7

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE-Ee
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV-ST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~   77 (131)
                      .++|...........+...+.+.+|+|||+.|+..+..   ..+.+||+.+++...+...........|+|||+.++ +.
T Consensus       179 ~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~  258 (427)
T PRK02889        179 QISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVAL  258 (427)
T ss_pred             EEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEE
Confidence            34555333333334667789999999999999876542   459999999888766655556667899999999886 45


Q ss_pred             CCCCeEEEe--eCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612         78 GKDNLLNAW--RTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~  129 (131)
                      +.++...+|  |..++....+..+........|+|+|+.++..+. ++...+|.+
T Consensus       259 ~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~  313 (427)
T PRK02889        259 SRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRM  313 (427)
T ss_pred             ccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEE
Confidence            667665555  5555554444445555677899999998876554 466677754

>KOG0650|consensus

Probab=99.61  E-value=3.9e-15  Score=95.07  Aligned_cols=127  Identities=17%  Similarity=0.178  Sum_probs=104.3

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |+|||+..++.++.+ .....|..++.+|.|..|+.++.|+.+..+|+....  ...+..|...+..++|++.-.+|+++
T Consensus       589 vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~  668 (733)
T KOG0650|consen  589 VRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASG  668 (733)
T ss_pred             eEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeee
Confidence            689999887777776 556679999999999999999999999999997553  35677789999999999999999999


Q ss_pred             CCCCeEEEee------C-CCCceE---EecCCCC----CeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         78 GKDNLLNAWR------T-PYGASI---FQSKESS----SVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        78 ~~~~~i~~w~------~-~~~~~~---~~~~~~~----~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      +.|+.+.++.      + ++.-.+   .+.+|..    .|....|+|...++++++.|++|++|
T Consensus       669 sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  669 SDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             cCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence            9999998884      2 122222   3344543    38888999999999999999999998

>KOG4227|consensus

Probab=99.61  E-value=1.1e-14  Score=89.49  Aligned_cols=115  Identities=17%  Similarity=0.213  Sum_probs=99.2

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC------CeEEe--eccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP------DKYQL--HLHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~------~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      +|.+.|.++.|+.++++|++|+.|..+++|.+...      +...+  ..|.+.|.+++|....+.+++|.+++++..-|
T Consensus        54 ~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HD  133 (609)
T KOG4227|consen   54 EHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHD  133 (609)
T ss_pred             hhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeee
Confidence            78999999999999999999999999999998632      22222  34668899999999888999999999999999


Q ss_pred             CCCCceEEecC---CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         88 TPYGASIFQSK---ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        88 ~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.+.+.+....   ..+.|..+..+|..+.+++.+.++.|.+||.+
T Consensus       134 iEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~R  179 (609)
T KOG4227|consen  134 IETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNR  179 (609)
T ss_pred             cccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEecc
Confidence            99998884443   45699999999999999999999999999986

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=5.7e-14  Score=89.88  Aligned_cols=125  Identities=18%  Similarity=0.232  Sum_probs=83.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEE--EeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEV--LHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+++++........+....++|+|||+.|+.+. .++...+  +|+.++....+..+...+....|+|||+.++..
T Consensus       230 i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~  309 (429)
T PRK01742        230 LVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFT  309 (429)
T ss_pred             EEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEE
Confidence            5789998876543333333445789999999888764 5776554  577777777777777778899999999987654


Q ss_pred             -CCCCeEEEeeCCC--CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 -GKDNLLNAWRTPY--GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 -~~~~~i~~w~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                       ..++...+|++..  +..... .+..  ....|+|+|++++..+.++ +.+||+
T Consensus       310 s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl  360 (429)
T PRK01742        310 SDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDL  360 (429)
T ss_pred             ECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEEC
Confidence             4567777776542  322222 2222  4567888888887766654 444765

>KOG2445|consensus

Probab=99.61  E-value=1.5e-13  Score=81.73  Aligned_cols=114  Identities=15%  Similarity=0.237  Sum_probs=94.0

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----e-EEeeccccceEEEEEcc--CCCEEEEeCCCCeEEEeeC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----K-YQLHLHESCVLSLRFAA--CGKWFVSTGKDNLLNAWRT   88 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~-~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~   88 (131)
                      +|..-|.++.|.+-|+.+++++.|.++++||.....    + .....|.+.|..+.|.+  -|+.+++++.|+++.+|.-
T Consensus        11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE   90 (361)
T KOG2445|consen   11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE   90 (361)
T ss_pred             CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence            677889999999999999999999999999975433    2 34578999999999975  4999999999999999975


Q ss_pred             CC------C-ceE---EecCCCCCeEEEEECCC--CCEEEEecCCCcEEEEEe
Q psy15612         89 PY------G-ASI---FQSKESSSVLSCDISAD--DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        89 ~~------~-~~~---~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~  129 (131)
                      ..      + +..   .+....+.|..+.|.|.  |-.+++++.||.++||+.
T Consensus        91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA  143 (361)
T KOG2445|consen   91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEA  143 (361)
T ss_pred             cccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEec
Confidence            21      1 111   34567889999999985  667899999999999975

>KOG0642|consensus

Probab=99.61  E-value=8.3e-15  Score=92.65  Aligned_cols=114  Identities=19%  Similarity=0.290  Sum_probs=98.3

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---------eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---------KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW   86 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w   86 (131)
                      .|...+..++|+|....|++++.++.+.+|.+....         +.++.+|.++|.|+.+.+++..+++++.|++|+.|
T Consensus       292 s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w  371 (577)
T KOG0642|consen  292 SHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCW  371 (577)
T ss_pred             cchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeee
Confidence            677889999999999999999999999999993211         35678999999999999999999999999999999


Q ss_pred             eCC------CCc---eE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         87 RTP------YGA---SI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        87 ~~~------~~~---~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++.      +..   .+  .+.+|.+.++.+++|+....|++++.||+++.|+.
T Consensus       372 ~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~  425 (577)
T KOG0642|consen  372 NLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEP  425 (577)
T ss_pred             ccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeecc
Confidence            543      211   22  56789999999999999888999999999999985

>KOG0644|consensus

Probab=99.61  E-value=6.4e-16  Score=101.84  Aligned_cols=111  Identities=14%  Similarity=0.297  Sum_probs=102.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +|...|+|..|...|..+++|+.|..+++|...+..+ ....+|.+.+.+++.+.+.-.+++++.|..|++|.+.++..+
T Consensus       188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv  267 (1113)
T KOG0644|consen  188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV  267 (1113)
T ss_pred             hhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchH
Confidence            7888999999999999999999999999999988876 667899999999999988888999999999999999999999


Q ss_pred             -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                       .+.+|.+.|++++|+|-.    +.+.||++++||.+
T Consensus       268 svLrghtgavtaiafsP~~----sss~dgt~~~wd~r  300 (1113)
T KOG0644|consen  268 SVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR  300 (1113)
T ss_pred             HHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence             888999999999999975    67789999999976

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=2.4e-13  Score=87.17  Aligned_cols=129  Identities=17%  Similarity=0.179  Sum_probs=90.8

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+.+++........+......|+|+|+.++. .+.++  .|.+||+.+++...+..+........|+|||+.++..
T Consensus       230 l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~  309 (433)
T PRK04922        230 IYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFT  309 (433)
T ss_pred             EEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEE
Confidence            46789888776544445555668899999998764 34444  5899999988877766665556678999999988766


Q ss_pred             C-CCCe--EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC-C--cEEEEEe
Q psy15612         78 G-KDNL--LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD-K--KATVYEV  129 (131)
Q Consensus        78 ~-~~~~--i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~vw~~  129 (131)
                      + .++.  ++++++.+++.............++|+|+|++++..+.+ +  .|.+||+
T Consensus       310 sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~  367 (433)
T PRK04922        310 SDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDL  367 (433)
T ss_pred             ECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEEC
Confidence            5 3443  667777777655333333445578999999998765433 2  5888885

>KOG2445|consensus

Probab=99.60  E-value=4.4e-13  Score=79.85  Aligned_cols=87  Identities=14%  Similarity=0.217  Sum_probs=66.5

Q ss_pred             CEEEeCCCCce----eeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCC-------C---eEEeeccccceE
Q psy15612          1 MYLQSVSPGRQ----LQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKP-------D---KYQLHLHESCVL   63 (131)
Q Consensus         1 i~iwd~~~~~~----~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~-------~---~~~~~~~~~~v~   63 (131)
                      |+|||.+....    .... .|.+.|..+.|.+.  |+.+++++.|+++.+|+-...       +   +..+....+.|.
T Consensus        37 vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~  116 (361)
T KOG2445|consen   37 VKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVT  116 (361)
T ss_pred             EEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCccee
Confidence            57999654322    2222 68899999999653  899999999999999986211       1   234555678899


Q ss_pred             EEEEccC--CCEEEEeCCCCeEEEee
Q psy15612         64 SLRFAAC--GKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        64 ~~~~~~~--~~~~~~~~~~~~i~~w~   87 (131)
                      ++.|.|.  |-.+++++.||.++||+
T Consensus       117 DV~FaP~hlGLklA~~~aDG~lRIYE  142 (361)
T KOG2445|consen  117 DVKFAPKHLGLKLAAASADGILRIYE  142 (361)
T ss_pred             EEEecchhcceEEEEeccCcEEEEEe
Confidence            9999994  77899999999999997

>KOG0642|consensus

Probab=99.60  E-value=5.8e-14  Score=88.93  Aligned_cols=90  Identities=12%  Similarity=0.151  Sum_probs=73.2

Q ss_pred             CEEEeCCC--------Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-----------eEEeecccc
Q psy15612          1 MYLQSVSP--------GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-----------KYQLHLHES   60 (131)
Q Consensus         1 i~iwd~~~--------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~   60 (131)
                      |++|+++.        -+++.++ +|.++|.++...+.+..+++|+.||+|+.|++....           ...+.+|..
T Consensus       318 lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtd  397 (577)
T KOG0642|consen  318 LKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTD  397 (577)
T ss_pred             hhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceecccc
Confidence            45787721        2344455 899999999999999999999999999999765221           134678999


Q ss_pred             ceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612         61 CVLSLRFAACGKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        61 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~   90 (131)
                      .+..+++|+....+++++.|++++.|+...
T Consensus       398 avw~l~~s~~~~~Llscs~DgTvr~w~~~~  427 (577)
T KOG0642|consen  398 AVWLLALSSTKDRLLSCSSDGTVRLWEPTE  427 (577)
T ss_pred             ceeeeeecccccceeeecCCceEEeeccCC
Confidence            999999999888899999999999998543

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.59  E-value=5.1e-13  Score=85.51  Aligned_cols=129  Identities=20%  Similarity=0.173  Sum_probs=86.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCCcEEEE--eCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENSNVEVL--HALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+.+++........+......|+|||+.|+. .+.++...+|  |+.++....+..+........|+|||+.++..
T Consensus       222 I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~  301 (427)
T PRK02889        222 VYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFT  301 (427)
T ss_pred             EEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEE
Confidence            46889988876554445566778999999998864 5666665555  55556666665555556678899999988765


Q ss_pred             CC-CCeEEEe--eCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC---cEEEEEe
Q psy15612         78 GK-DNLLNAW--RTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK---KATVYEV  129 (131)
Q Consensus        78 ~~-~~~i~~w--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~vw~~  129 (131)
                      +. ++...+|  +..+++..............+|+|+|++++..+.++   .|.+||+
T Consensus       302 s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~  359 (427)
T PRK02889        302 SDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDL  359 (427)
T ss_pred             ecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEEC
Confidence            43 4555555  545555442222233345688999999988665543   5888886

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.59  E-value=6.3e-13  Score=84.80  Aligned_cols=129  Identities=16%  Similarity=0.142  Sum_probs=92.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCC--CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MEN--SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~--~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+.+++......+.+.+..++|+|+++.|+.. ..+  ..+.+|++.++....+..+........|+|||+.++..
T Consensus       216 i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~  295 (417)
T TIGR02800       216 IYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFT  295 (417)
T ss_pred             EEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEE
Confidence            468899888765555556667789999999977654 333  35888999888766665555555577899999988765


Q ss_pred             CC-CC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC---cEEEEEe
Q psy15612         78 GK-DN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK---KATVYEV  129 (131)
Q Consensus        78 ~~-~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~vw~~  129 (131)
                      +. .+  .++++++.+++.............+.|+|+|++++.++.++   .|.+||+
T Consensus       296 s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~  353 (417)
T TIGR02800       296 SDRGGSPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDL  353 (417)
T ss_pred             ECCCCCceEEEEECCCCCEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeC
Confidence            43 33  57888888776654444556677889999999988776654   5777765

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG1524|consensus

Probab=99.58  E-value=1.3e-14  Score=91.96  Aligned_cols=119  Identities=16%  Similarity=0.137  Sum_probs=94.5

Q ss_pred             ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeC
Q psy15612         10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT   88 (131)
Q Consensus        10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~   88 (131)
                      +..... .|.+.+.+-.|+|+|.-|++.++||.+++|.-.+--...+.....+|+|++|.|+.+.++.+.. +.+.+=.+
T Consensus        95 rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL  173 (737)
T KOG1524|consen   95 RVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPL  173 (737)
T ss_pred             hhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeec
Confidence            333334 6888899999999999999999999999999765444455566778999999998877665543 34444444


Q ss_pred             CC-CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         89 PY-GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        89 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .. .+.+.-..|.+.|.++.|++...++++|++|-+.++||-
T Consensus       174 ~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~  215 (737)
T KOG1524|consen  174 AANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA  215 (737)
T ss_pred             ccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecc
Confidence            42 344477789999999999999999999999999999995

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.58  E-value=2.3e-12  Score=80.98  Aligned_cols=129  Identities=24%  Similarity=0.381  Sum_probs=104.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeE--EeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKY--QLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      +++|+..+++.+..+ .|...+..++|+|++. .+++++.++.+.+||...+...  .+..|.... ...|+|++..+++
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  258 (466)
T COG2319         180 IKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLAS  258 (466)
T ss_pred             eEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEE
Confidence            578999987777777 6889999999999998 5555589999999988866653  366666664 3389999988889


Q ss_pred             eCCCCeEEEeeCCCCce-E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGAS-I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.++.+++|+...... . ....|...+.++.|+|++..+++++.|+.+.+||+.
T Consensus       259 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~  314 (466)
T COG2319         259 GSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLE  314 (466)
T ss_pred             ecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcC
Confidence            99999999999987664 3 335678999999999988888888888889999764

>KOG0307|consensus

Probab=99.57  E-value=3.3e-14  Score=95.90  Aligned_cols=129  Identities=16%  Similarity=0.243  Sum_probs=103.3

Q ss_pred             EEEeCCCCceeeee-cCC--CCeEEEEECCCCC-EEEEEeCC---CcEEEEeCCCCC--eEEeeccccceEEEEEccCC-
Q psy15612          2 YLQSVSPGRQLQQH-DFS--SQIFSLGYCPSGE-WLAVGMEN---SNVEVLHALKPD--KYQLHLHESCVLSLRFAACG-   71 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~--~~v~~~~~~~~~~-~l~~~~~~---~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~-   71 (131)
                      -|||++..+.+-.+ .+.  ..+..++|+|+.. .+++++.|   ..|.+||++...  .+.+.+|...|.++.|++.+ 
T Consensus       187 ~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~  266 (1049)
T KOG0307|consen  187 VIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDP  266 (1049)
T ss_pred             eeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCc
Confidence            58999988777666 222  4588999999855 45555544   348899997554  45668999999999999965 


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      .++++++.|+.+.+|+..+++.+ .+...+..+..+.|.|... .++.++-||+|.|+.+.
T Consensus       267 ~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~  327 (1049)
T KOG0307|consen  267 RLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQ  327 (1049)
T ss_pred             hhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeee
Confidence            78899999999999999999999 4555778899999999765 77788889999999874

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.56  E-value=1.6e-12  Score=83.40  Aligned_cols=127  Identities=12%  Similarity=-0.005  Sum_probs=88.7

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-e
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS-T   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~   77 (131)
                      .++|...++......+...+....|+|||+.|+..+.+   ..|.++++.+++...+....+......|+|||+.++. .
T Consensus       182 ~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~  261 (430)
T PRK00178        182 QRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVL  261 (430)
T ss_pred             EEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEE
Confidence            34465544443344667788999999999998876543   3688899988877666555555667899999998764 4


Q ss_pred             CCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCc--EEEEE
Q psy15612         78 GKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKK--ATVYE  128 (131)
Q Consensus        78 ~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~vw~  128 (131)
                      +.++  .|+++|+.+++...+..+........|+|+|+.++..+. ++.  |.++|
T Consensus       262 ~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d  317 (430)
T PRK00178        262 SKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVN  317 (430)
T ss_pred             ccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence            4444  588889988876655555556677899999998765543 444  44444

>KOG0974|consensus

Probab=99.56  E-value=1.5e-13  Score=92.15  Aligned_cols=127  Identities=12%  Similarity=0.183  Sum_probs=105.6

Q ss_pred             CEEEeCC-CCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVS-PGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |.+|+.. +.......+|.+.+.++.++-||+++++.+.|.++++|++.+.+.  ....+|+..+..+.|.|+  .++++
T Consensus       157 iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~  234 (967)
T KOG0974|consen  157 IIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITV  234 (967)
T ss_pred             EEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEe
Confidence            3567665 333444559999999999999999999999999999999998885  356789999999999987  89999


Q ss_pred             CCCCeEEEeeCCCCceEEecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.|.+.++|+....+.....+ ....+..++..++....++++.|+.+++|++
T Consensus       235 gedctcrvW~~~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l  287 (967)
T KOG0974|consen  235 GEDCTCRVWGVNGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDL  287 (967)
T ss_pred             ccceEEEEEecccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhh
Confidence            999999999766444433333 4577899999999889999999999999986

>KOG1188|consensus

Probab=99.56  E-value=2.3e-13  Score=81.89  Aligned_cols=130  Identities=18%  Similarity=0.172  Sum_probs=98.4

Q ss_pred             CEEEeCCCCceeeee---cCC-CCeEEEEECCCCCEEEEEeC----CCcEEEEeCCCCCe---EEeeccccceEEEEEcc
Q psy15612          1 MYLQSVSPGRQLQQH---DFS-SQIFSLGYCPSGEWLAVGME----NSNVEVLHALKPDK---YQLHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~-~~v~~~~~~~~~~~l~~~~~----~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~   69 (131)
                      ||+||+++......+   +++ .+..+++.+-.++.+++|..    +-.|.+||.+..+.   .-...|...|.+++|+|
T Consensus        96 Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP  175 (376)
T KOG1188|consen   96 VRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHP  175 (376)
T ss_pred             EEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecC
Confidence            689999976655444   333 35667776667788888743    56799999987664   22467999999999999


Q ss_pred             C-CCEEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612         70 C-GKWFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 ~-~~~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~  130 (131)
                      . .+.+++|+-||.+.+||+......    ....+...|.++.|..++ +.+.+.+...+..+|++.
T Consensus       176 ~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele  242 (376)
T KOG1188|consen  176 SDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELE  242 (376)
T ss_pred             CCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEcc
Confidence            5 668899999999999999754332    334577889999998776 357777888899999874

>KOG1272|consensus

Probab=99.55  E-value=1.9e-14  Score=89.59  Aligned_cols=125  Identities=14%  Similarity=0.193  Sum_probs=99.3

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      +.-|+.+|+.+..+ ...+.+..|+-+|-...+-+|..+|+|.+|...+.+. .++.+|.+.|.++++.++|+++++++.
T Consensus       234 ~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~  313 (545)
T KOG1272|consen  234 KYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGL  313 (545)
T ss_pred             EEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeeccc
Confidence            34578888888777 5667888999999999999999999999999988774 667899999999999999999999999


Q ss_pred             CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      |+.++|||+++-..+.....+-....+++|..|-+ + .+....+.+|.
T Consensus       314 Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~SqkglL-A-~~~G~~v~iw~  360 (545)
T KOG1272|consen  314 DRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKGLL-A-LSYGDHVQIWK  360 (545)
T ss_pred             ccceeEeeeccccccceeecCCCccccccccccce-e-eecCCeeeeeh
Confidence            99999999998776522222455567788766543 3 33334688873

>KOG4497|consensus

Probab=99.55  E-value=6.6e-13  Score=80.03  Aligned_cols=128  Identities=13%  Similarity=0.209  Sum_probs=91.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAV-GMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |.+|++.+.+--..+ ..+.++.+..|+|||+.++. ...+..+.+|.+.+.....++..+..+..++|+|||++.+..+
T Consensus        73 vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~s  152 (447)
T KOG4497|consen   73 VQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILS  152 (447)
T ss_pred             EEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeee
Confidence            568998887777666 56678999999999976655 5557889999999888766666666778999999999988776


Q ss_pred             CCCe------------------------------------EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC
Q psy15612         79 KDNL------------------------------------LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK  122 (131)
Q Consensus        79 ~~~~------------------------------------i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  122 (131)
                      +...                                    +.+||.--...+..-..+-.+..++|+|.+++++.|+.|+
T Consensus       153 RrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~  232 (447)
T KOG4497|consen  153 RRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQ  232 (447)
T ss_pred             cccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccch
Confidence            5321                                    2222211000001111235578899999999999999999


Q ss_pred             cEEEEE
Q psy15612        123 KATVYE  128 (131)
Q Consensus       123 ~i~vw~  128 (131)
                      .+++.|
T Consensus       233 ~lrvln  238 (447)
T KOG4497|consen  233 MLRVLN  238 (447)
T ss_pred             hhhhhc
Confidence            888754

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.54  E-value=6.4e-13  Score=76.61  Aligned_cols=90  Identities=18%  Similarity=0.365  Sum_probs=68.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |.+||++ ++.+..++ ...+..+.|+|+|+++++++.   .|.+.+||..+.+......|. .+..++|+|||++++++
T Consensus        85 v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~-~~t~~~WsPdGr~~~ta  161 (194)
T PF08662_consen   85 VTLYDVK-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS-DATDVEWSPDGRYLATA  161 (194)
T ss_pred             cEEEcCc-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccC-cEEEEEEcCCCCEEEEE
Confidence            5788986 66665664 456789999999999998864   356999999966654333333 47899999999999987


Q ss_pred             CC------CCeEEEeeCCCCceE
Q psy15612         78 GK------DNLLNAWRTPYGASI   94 (131)
Q Consensus        78 ~~------~~~i~~w~~~~~~~~   94 (131)
                      ..      |+.++||+.. |+.+
T Consensus       162 ~t~~r~~~dng~~Iw~~~-G~~l  183 (194)
T PF08662_consen  162 TTSPRLRVDNGFKIWSFQ-GRLL  183 (194)
T ss_pred             EeccceeccccEEEEEec-CeEe
Confidence            54      6789999985 6655

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.54  E-value=2e-12  Score=82.54  Aligned_cols=128  Identities=13%  Similarity=0.022  Sum_probs=89.3

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-e
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS-T   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~   77 (131)
                      .++|....+......+...+....|+|+|+.++.+...   ..+.+|++.+++...+..+......++|+|||+.++. .
T Consensus       173 ~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~  252 (417)
T TIGR02800       173 QVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSL  252 (417)
T ss_pred             EEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEE
Confidence            45565544444444666678999999999999877543   4799999998876666556666778999999997764 4


Q ss_pred             CCC--CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CC--cEEEEEe
Q psy15612         78 GKD--NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DK--KATVYEV  129 (131)
Q Consensus        78 ~~~--~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~vw~~  129 (131)
                      +.+  ..+++|++.+++...+..+........|+|+|+.++..+. ++  .|.++|+
T Consensus       253 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~  309 (417)
T TIGR02800       253 SKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDA  309 (417)
T ss_pred             CCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence            443  3588899988766644444455567789999998876543 34  3555553

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2110|consensus

Probab=99.54  E-value=3e-12  Score=77.84  Aligned_cols=125  Identities=11%  Similarity=0.115  Sum_probs=92.0

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEe---eccccceEEEEEccCCCEEEEe
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQL---HLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~---~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      ++.+++.+..+..+.....|.++.++.  +.|+++-.+ .+.+||++.-+. .++   ..+...+..+..++.+.+++..
T Consensus        71 kv~~~Kk~~~ICe~~fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp  147 (391)
T KOG2110|consen   71 KVVHFKKKTTICEIFFPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYP  147 (391)
T ss_pred             EEEEcccCceEEEEecCCceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEec
Confidence            455666666666666677888888853  445554444 499999998775 333   2345556666666677788754


Q ss_pred             C--CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCc-EEEEEe
Q psy15612         78 G--KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKK-ATVYEV  129 (131)
Q Consensus        78 ~--~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~vw~~  129 (131)
                      +  ..|.+.+||..+-+.. ....|.+.+.+++|+++|.+++++++.|+ |+|+.+
T Consensus       148 ~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v  203 (391)
T KOG2110|consen  148 GSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSV  203 (391)
T ss_pred             CCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEc
Confidence            3  2578999999988877 67789999999999999999999999886 677654

>KOG0321|consensus

Probab=99.54  E-value=9.2e-14  Score=89.36  Aligned_cols=109  Identities=17%  Similarity=0.252  Sum_probs=91.3

Q ss_pred             EEEEECC---CCCEEEEEeCCCcEEEEeCCCCCe-------EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612         22 FSLGYCP---SGEWLAVGMENSNVEVLHALKPDK-------YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        22 ~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      .+..|++   ....|+.+.++|.|.++|.+....       .....|...|.++.|.|....|++++.|.++++||+.++
T Consensus        53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s  132 (720)
T KOG0321|consen   53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS  132 (720)
T ss_pred             ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence            3456655   255788999999999999875432       334679999999999996678899999999999999988


Q ss_pred             ceE---EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612         92 ASI---FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        92 ~~~---~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.   ...+|.+.+.+++|.|.. ..|++|+.||.+.|||++
T Consensus       133 ~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R  175 (720)
T KOG0321|consen  133 RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCR  175 (720)
T ss_pred             eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEe
Confidence            887   478999999999999965 467899999999999987

>KOG1538|consensus

Probab=99.53  E-value=3.8e-14  Score=92.14  Aligned_cols=125  Identities=16%  Similarity=0.311  Sum_probs=100.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      +.+||...|..++++ +|...|++++|+.+|+.+++|+.|..|.+|...-.-..+ -.|...|.|+.|+|-...+++++-
T Consensus        35 lliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~Lk-YSH~D~IQCMsFNP~~h~LasCsL  113 (1081)
T KOG1538|consen   35 LLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILK-YSHNDAIQCMSFNPITHQLASCSL  113 (1081)
T ss_pred             EEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceee-eccCCeeeEeecCchHHHhhhcch
Confidence            468999999999988 999999999999999999999999999999875333222 357888999999998888887764


Q ss_pred             CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      . ..-+|........ ......++.+.+|..||++++.|-.+|+|.+-+
T Consensus       114 s-dFglWS~~qK~V~-K~kss~R~~~CsWtnDGqylalG~~nGTIsiRN  160 (1081)
T KOG1538|consen  114 S-DFGLWSPEQKSVS-KHKSSSRIICCSWTNDGQYLALGMFNGTISIRN  160 (1081)
T ss_pred             h-hccccChhhhhHH-hhhhheeEEEeeecCCCcEEEEeccCceEEeec
Confidence            3 3567776543322 223457788999999999999999999988754

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.53  E-value=8e-12  Score=77.64  Aligned_cols=130  Identities=9%  Similarity=0.052  Sum_probs=89.3

Q ss_pred             CEEEeCC-CCce--eeeecCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCC-e---EEeeccccceEEEEEccCCC
Q psy15612          1 MYLQSVS-PGRQ--LQQHDFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPD-K---YQLHLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~-~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~-~---~~~~~~~~~v~~~~~~~~~~   72 (131)
                      |..|++. +++.  +......+....+.++|+++.+++++. ++.+.+|++.... .   .....+...+..++++|+++
T Consensus        59 i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~  138 (330)
T PRK11028         59 VLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNR  138 (330)
T ss_pred             EEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCC
Confidence            3567775 3332  222234456778999999998887754 7889999986422 1   11112334567889999999


Q ss_pred             EEEEe-CCCCeEEEeeCCCCceE-------EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612         73 WFVST-GKDNLLNAWRTPYGASI-------FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~-~~~~~i~~w~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~  130 (131)
                      +++++ ..++.|.+||+.+...+       .....+..+..+.|+|++++++++.. +++|.+|++.
T Consensus       139 ~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~  205 (330)
T PRK11028        139 TLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK  205 (330)
T ss_pred             EEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence            88655 45689999999763222       11223556788999999999987766 8899999974

>KOG0649|consensus

Probab=99.52  E-value=8.9e-13  Score=76.55  Aligned_cols=109  Identities=13%  Similarity=0.151  Sum_probs=85.9

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS   97 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~   97 (131)
                      ..|++|-..|..+.++.++.|+.++.||+++++. +.+.+|...+.++.-......+++|+.||++++||.+++++....
T Consensus       115 PeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~i  194 (325)
T KOG0649|consen  115 PEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMI  194 (325)
T ss_pred             CccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEe
Confidence            3589999999988888888999999999999997 678999999999988666677889999999999999999987221


Q ss_pred             C-----------CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         98 K-----------ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        98 ~-----------~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +           .+..|-+++.  +..++++|+. ..+.+|.++
T Consensus       195 e~yk~~~~lRp~~g~wigala~--~edWlvCGgG-p~lslwhLr  235 (325)
T KOG0649|consen  195 EPYKNPNLLRPDWGKWIGALAV--NEDWLVCGGG-PKLSLWHLR  235 (325)
T ss_pred             ccccChhhcCcccCceeEEEec--cCceEEecCC-CceeEEecc
Confidence            1           1223444443  5667777654 578899876

>KOG4328|consensus

Probab=99.52  E-value=1.6e-13  Score=85.16  Aligned_cols=112  Identities=16%  Similarity=0.196  Sum_probs=92.2

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCC-CEEEEeCCCCeEEEeeCCCC--c
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNAWRTPYG--A   92 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~--~   92 (131)
                      ......+.|+.+.+.++.+..-|...+||+++...  ..+.-|+..|..++++|.. .++++++.|++.+|||++.-  +
T Consensus       279 ~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K  358 (498)
T KOG4328|consen  279 NIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGK  358 (498)
T ss_pred             ceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCC
Confidence            34567888888888888888888999999987653  4455677799999999964 46889999999999998742  2


Q ss_pred             e---EEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         93 S---IFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        93 ~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .   +....|...|.+..|||.+-.+++.+.|..|+|||.
T Consensus       359 ~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~ds  398 (498)
T KOG4328|consen  359 ASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDS  398 (498)
T ss_pred             CCcceecccccceeeeeEEcCCCCceEeeccCCceEEeec
Confidence            2   366789999999999998777999999999999996

>KOG2139|consensus

Probab=99.52  E-value=2.3e-12  Score=78.48  Aligned_cols=126  Identities=16%  Similarity=0.146  Sum_probs=93.9

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC-e--------------EEeeccccce
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD-K--------------YQLHLHESCV   62 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~-~--------------~~~~~~~~~v   62 (131)
                      ||+||-.. ++...+  ..+..|.+++|-|.+. .++.|+..| +.+|.....- .              .+-.+| ..|
T Consensus       122 Vriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pV  198 (445)
T KOG2139|consen  122 VRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPV  198 (445)
T ss_pred             EEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-cee
Confidence            57787665 444444  3456799999999644 566776655 9999875221 0              111223 578


Q ss_pred             EEEEEccCCCEEEEeCC-CCeEEEeeCCCCceEEec-CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         63 LSLRFAACGKWFVSTGK-DNLLNAWRTPYGASIFQS-KESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+++|++||..+++++. +..|.+||..++....+. ...+.+.-+.||||+.++..+.-|+..++|+.
T Consensus       199 tsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e  267 (445)
T KOG2139|consen  199 TSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQE  267 (445)
T ss_pred             eEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehh
Confidence            99999999999998876 456999999999887443 45677889999999999999999999999954

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.52  E-value=4e-12  Score=81.84  Aligned_cols=125  Identities=14%  Similarity=0.080  Sum_probs=84.5

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-eC
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS-TG   78 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~   78 (131)
                      +.|....+..........+....|+|||+.|+..+.+   ..|.++|+.+++...+...........|+|||+.++. .+
T Consensus       202 i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~  281 (448)
T PRK04792        202 IADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLS  281 (448)
T ss_pred             EEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEe
Confidence            3454433333333556678899999999998876432   3588889988776555444444457899999998765 44


Q ss_pred             CCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEE
Q psy15612         79 KDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVY  127 (131)
Q Consensus        79 ~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw  127 (131)
                      .++  .|+++|+.+++...+..+.......+|+|+|+.++..+. ++...+|
T Consensus       282 ~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy  333 (448)
T PRK04792        282 KDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIY  333 (448)
T ss_pred             CCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEE
Confidence            455  477889888776655445556678899999998866543 4444444

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.51  E-value=1.1e-11  Score=76.94  Aligned_cols=130  Identities=14%  Similarity=0.140  Sum_probs=90.5

Q ss_pred             CEEEeCCC-Cc--eeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCC-CCCeEEe--eccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSP-GR--QLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHAL-KPDKYQL--HLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~-~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~-~~~~~~~--~~~~~~v~~~~~~~~~~~   73 (131)
                      |++||+.+ ++  .+..+...+....++++|+++.|++++ .++.+.+|++. .+.....  ......+..+.++|+++.
T Consensus        14 I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~   93 (330)
T PRK11028         14 IHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRF   93 (330)
T ss_pred             EEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCE
Confidence            57899864 43  344455556788899999999887664 47789999986 3333221  123345678999999998


Q ss_pred             EEEeCC-CCeEEEeeCCC-Cce---EEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612         74 FVSTGK-DNLLNAWRTPY-GAS---IFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~-~~~i~~w~~~~-~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~  130 (131)
                      +++++. ++.+.+|++.+ +..   .........+..++++|+++++++++ .++.|.+||+.
T Consensus        94 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~  156 (330)
T PRK11028         94 LFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLS  156 (330)
T ss_pred             EEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEEC
Confidence            887754 78899999863 322   12222334577889999999886544 56899999973

>KOG3914|consensus

Probab=99.51  E-value=8.8e-13  Score=80.69  Aligned_cols=110  Identities=16%  Similarity=0.251  Sum_probs=83.4

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEE---EEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVE---VLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--   94 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--   94 (131)
                      ...++.+..+......+...|.+.   +|....+....+.+|-+.+.+++++||++.++++.+|..|++-........  
T Consensus       109 ~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Ies  188 (390)
T KOG3914|consen  109 RPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIES  188 (390)
T ss_pred             CcceeeeeeccceEEEEeecCCceeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhh
Confidence            344455544455444444444444   444444556677889999999999999999999999999999887655555  


Q ss_pred             EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +..+|...|..++.-++ ..|++++.|+++++||++
T Consensus       189 fclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~  223 (390)
T KOG3914|consen  189 FCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDIT  223 (390)
T ss_pred             hccccHhheeeeeeccC-ceeeecCCCCcEEEEecc
Confidence            78899999999998766 448899999999999985

>KOG4227|consensus

Probab=99.51  E-value=1.4e-12  Score=80.41  Aligned_cols=130  Identities=11%  Similarity=0.106  Sum_probs=104.7

Q ss_pred             CEEEeCC------CCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccc---cceEEEEEcc
Q psy15612          1 MYLQSVS------PGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHE---SCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~---~~v~~~~~~~   69 (131)
                      +++|+++      +.+++...  .|...|.+++|....+++++|..+++|...|+++.+...+..|.   +.|+.+..+|
T Consensus        80 ~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P  159 (609)
T KOG4227|consen   80 GRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHP  159 (609)
T ss_pred             eeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCC
Confidence            4688875      34666665  46678999999999999999999999999999988865554444   4899999999


Q ss_pred             CCCEEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612         70 CGKWFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 ~~~~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~  130 (131)
                      -.+.+++.+.++.+.+||.+.....    .....+.....+.|+|. .+++++.+..+-+.+||.+
T Consensus       160 ~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R  225 (609)
T KOG4227|consen  160 TDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRR  225 (609)
T ss_pred             CCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeec
Confidence            9999999999999999999866522    33345677788999996 4567788888889999986

>KOG0974|consensus

Probab=99.50  E-value=1.7e-12  Score=87.23  Aligned_cols=126  Identities=17%  Similarity=0.265  Sum_probs=101.7

Q ss_pred             EEEeCCCCceeeeecCCCCe-----EEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQI-----FSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFV   75 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~   75 (131)
                      -+||...+.......+.+..     .-+..+++.-++++|+--+.+.+|+....+. ..+.+|++.+..+.++.||++++
T Consensus       112 ~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~  191 (967)
T KOG0974|consen  112 LIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIA  191 (967)
T ss_pred             EEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEE
Confidence            35565555544444444432     2333467777889999999999999874443 45789999999999999999999


Q ss_pred             EeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         76 STGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.|.|+.+++|++.+++..  ...+|+.++..++|.|+  .+++++.|-+.++|+.
T Consensus       192 s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~  245 (967)
T KOG0974|consen  192 SVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGV  245 (967)
T ss_pred             EEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEec
Confidence            9999999999999998887  67789999999999998  8999999999999964

>KOG1517|consensus

Probab=99.50  E-value=2.5e-12  Score=87.30  Aligned_cols=129  Identities=15%  Similarity=0.190  Sum_probs=98.3

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCe----EEeeccccc--eEEEEEccCC
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDK----YQLHLHESC--VLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~--v~~~~~~~~~   71 (131)
                      |||||+...++...+  +....+.++.-+- .|..++.|..||.|++||.+....    .....|...  |..+.+.+.|
T Consensus      1189 IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G 1268 (1387)
T KOG1517|consen 1189 IRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQG 1268 (1387)
T ss_pred             EEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCC
Confidence            689999987777766  4445566665533 478999999999999999986542    334455554  8999998866


Q ss_pred             CE-EEEeCCCCeEEEeeCCCCceE-Ee--cC---CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         72 KW-FVSTGKDNLLNAWRTPYGASI-FQ--SK---ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~-~~~~~~~~~i~~w~~~~~~~~-~~--~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      -- +++++.+|.|++||++..... +.  ..   .++..+++..+++...+++|+. +.++||++.
T Consensus      1269 ~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~ 1333 (1387)
T KOG1517|consen 1269 LGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS 1333 (1387)
T ss_pred             CcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC
Confidence            54 999999999999999974322 21  11   2446999999999999999988 899999873

>KOG0649|consensus

Probab=99.50  E-value=4.6e-12  Score=73.67  Aligned_cols=124  Identities=16%  Similarity=0.254  Sum_probs=92.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-ec--c--------ccceEEEEEc
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HL--H--------ESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~--~--------~~~v~~~~~~   68 (131)
                      ++-||+++|+....+ +|.+.+-++.-......+++|++||++++||.++.+..+. ..  +        ...|.+++- 
T Consensus       138 ~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~-  216 (325)
T KOG0649|consen  138 IYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV-  216 (325)
T ss_pred             EEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec-
Confidence            467999999999888 9999999999866677889999999999999999885332 11  1        122344444 


Q ss_pred             cCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        69 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                       +..++++|+ ...+.+|+++..++....+-+..+..+.|-  ...+++++..+.+.-|.+
T Consensus       217 -~edWlvCGg-Gp~lslwhLrsse~t~vfpipa~v~~v~F~--~d~vl~~G~g~~v~~~~l  273 (325)
T KOG0649|consen  217 -NEDWLVCGG-GPKLSLWHLRSSESTCVFPIPARVHLVDFV--DDCVLIGGEGNHVQSYTL  273 (325)
T ss_pred             -cCceEEecC-CCceeEEeccCCCceEEEecccceeEeeee--cceEEEeccccceeeeee
Confidence             445665554 667899999999888777788888888885  344666666666766654

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.49  E-value=1.1e-11  Score=79.64  Aligned_cols=129  Identities=16%  Similarity=0.139  Sum_probs=87.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |.+||+.+++........+......|+|+|+.|+. ...++  .+.++|+.++....+..+........|+|||+.++..
T Consensus       225 l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~  304 (430)
T PRK00178        225 IFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFT  304 (430)
T ss_pred             EEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEE
Confidence            45778888776554444455667999999998874 33444  5888899888876666666566678899999987765


Q ss_pred             CC-C--CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CC--cEEEEEe
Q psy15612         78 GK-D--NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DK--KATVYEV  129 (131)
Q Consensus        78 ~~-~--~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~vw~~  129 (131)
                      +. +  ..++++++.+++...............|+|+|++++..+. ++  .+.++|+
T Consensus       305 s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl  362 (430)
T PRK00178        305 SDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDL  362 (430)
T ss_pred             ECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEEC
Confidence            43 3  3577778877775533222233446789999999876654 33  3566664

>KOG0290|consensus

Probab=99.49  E-value=1.5e-12  Score=77.23  Aligned_cols=115  Identities=16%  Similarity=0.245  Sum_probs=91.8

Q ss_pred             cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCC-EEEEeCCCCeEEEeeCC
Q psy15612         16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~   89 (131)
                      .+..++.+..|+. +.+++.+.+-|-+..+||++++.    ..++..|..+|++++|...+. .|++.+.||.+++||++
T Consensus       148 ~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR  227 (364)
T KOG0290|consen  148 EFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR  227 (364)
T ss_pred             ccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence            4667899999987 56788888999999999998863    356789999999999998654 68899999999999999


Q ss_pred             CCceE---EecCC-CCCeEEEEECCC-CCEEEEecCC-CcEEEEEee
Q psy15612         90 YGASI---FQSKE-SSSVLSCDISAD-DKYIVTGSGD-KKATVYEVI  130 (131)
Q Consensus        90 ~~~~~---~~~~~-~~~v~~~~~~~~-~~~l~~~~~d-~~i~vw~~~  130 (131)
                      ..+.-   +..+. ..+...++|+++ -+++++-..| ..|.+.|+|
T Consensus       228 ~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR  274 (364)
T KOG0290|consen  228 SLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIR  274 (364)
T ss_pred             ccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEec
Confidence            76654   33333 577889999974 5677765554 579999987

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.47  E-value=2.1e-11  Score=78.59  Aligned_cols=127  Identities=13%  Similarity=0.150  Sum_probs=85.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCCc--EEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENSN--VEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~--v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |+++|+.+++........+......|+|||+.|+. ...++.  |.++|+.+++...+..+........|+|||+.++..
T Consensus       244 L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~  323 (448)
T PRK04792        244 IFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFT  323 (448)
T ss_pred             EEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEE
Confidence            46778887765443333444557899999998865 455554  777888888776666665566788999999988765


Q ss_pred             CC-CC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEE
Q psy15612         78 GK-DN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVY  127 (131)
Q Consensus        78 ~~-~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw  127 (131)
                      +. ++  .++++|+.+++...+..........+|+|+|++++..+. ++...+|
T Consensus       324 s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~  377 (448)
T PRK04792        324 SERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIA  377 (448)
T ss_pred             ECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEE
Confidence            43 33  466778877776533222333445789999998876554 4444444

>KOG2139|consensus

Probab=99.46  E-value=8e-12  Score=76.18  Aligned_cols=110  Identities=13%  Similarity=0.136  Sum_probs=82.4

Q ss_pred             CCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc-eEE
Q psy15612         19 SQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA-SIF   95 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~-~~~   95 (131)
                      ..|.+|+|++||..+++++. +..+.+||..++....+. ...+.+.-++|||||.++..+..|+..++|+..... ...
T Consensus       196 ~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~er  275 (445)
T KOG2139|consen  196 NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKER  275 (445)
T ss_pred             ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecc
Confidence            57999999999999988765 567999999988865444 445678899999999999999999999999654322 222


Q ss_pred             ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         96 QSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ..-..+.|...+|+|+|+++..++. +.-++|.+
T Consensus       276 w~lgsgrvqtacWspcGsfLLf~~s-gsp~lysl  308 (445)
T KOG2139|consen  276 WILGSGRVQTACWSPCGSFLLFACS-GSPRLYSL  308 (445)
T ss_pred             eeccCCceeeeeecCCCCEEEEEEc-CCceEEEE
Confidence            2223448999999999998765443 23344444

>KOG2315|consensus

Probab=99.46  E-value=1.4e-11  Score=78.45  Aligned_cols=125  Identities=18%  Similarity=0.273  Sum_probs=92.4

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE--EeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV--GMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      ++.+++...+...+...++|.++.|+|+++-++.  |-.-..+.+||++...+..+.  +++-.++-|+|.|++++.++.
T Consensus       254 yll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~--egpRN~~~fnp~g~ii~lAGF  331 (566)
T KOG2315|consen  254 YLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFP--EGPRNTAFFNPHGNIILLAGF  331 (566)
T ss_pred             EEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCC--CCCccceEECCCCCEEEEeec
Confidence            4556664445555677899999999999987654  555677999999877665543  344568999999999998877


Q ss_pred             C---CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC------CCcEEEEEe
Q psy15612         80 D---NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG------DKKATVYEV  129 (131)
Q Consensus        80 ~---~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~vw~~  129 (131)
                      +   |.|-+||..+.+.+..... ...+-..|+|+|++++++..      |..++||+.
T Consensus       332 GNL~G~mEvwDv~n~K~i~~~~a-~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy  389 (566)
T KOG2315|consen  332 GNLPGDMEVWDVPNRKLIAKFKA-ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY  389 (566)
T ss_pred             CCCCCceEEEeccchhhcccccc-CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEe
Confidence            5   5799999998766632222 23345889999999987653      678999975

>KOG1524|consensus

Probab=99.46  E-value=1.7e-12  Score=82.63  Aligned_cols=122  Identities=16%  Similarity=0.241  Sum_probs=89.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-CeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-DKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++|. ++|-...++ .....|++++|.|+...++.+.. +.+.+-.+... +..+-..|.+-|.++.|++....+++++
T Consensus       128 iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgG  205 (737)
T KOG1524|consen  128 IKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGG  205 (737)
T ss_pred             EEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEeecccccceeEEeccCcEEEEeecCccccceeecC
Confidence            46777 446555555 66788999999999887766543 45777666543 3567789999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-Eec-----------------------------CCCCCeEEEEECCCCCEEEEecCCCcEE
Q psy15612         79 KDNLLNAWRTPYGASI-FQS-----------------------------KESSSVLSCDISADDKYIVTGSGDKKAT  125 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~-----------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~  125 (131)
                      .|-..++||.. |+.+ ...                             ...+.|..++||+||..++.|...|.+.
T Consensus       206 ED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~  281 (737)
T KOG1524|consen  206 EDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTGQLI  281 (737)
T ss_pred             CceeEEeeccc-CcccccCChhccceeeeeeccccceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCceEE
Confidence            99999999965 3222 111                             2345667777777777777776666544

>KOG1538|consensus

Probab=99.44  E-value=7.7e-13  Score=86.26  Aligned_cols=99  Identities=17%  Similarity=0.253  Sum_probs=84.2

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK   98 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~   98 (131)
                      .|..++|-|||..|+.+..+ .+.+||...+. ...+.+|+..|++++|+.||+.+++|+.|..+.+|+..- +-+..-.
T Consensus        14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl-EG~LkYS   91 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL-EGILKYS   91 (1081)
T ss_pred             chheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccc-cceeeec
Confidence            78999999999998887554 69999998776 478899999999999999999999999999999998652 2234456


Q ss_pred             CCCCeEEEEECCCCCEEEEecC
Q psy15612         99 ESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        99 ~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      |++.|.|+.|+|....+++++-
T Consensus        92 H~D~IQCMsFNP~~h~LasCsL  113 (1081)
T KOG1538|consen   92 HNDAIQCMSFNPITHQLASCSL  113 (1081)
T ss_pred             cCCeeeEeecCchHHHhhhcch
Confidence            8999999999998888877654

>KOG1240|consensus

Probab=99.43  E-value=2e-11  Score=83.90  Aligned_cols=123  Identities=16%  Similarity=0.214  Sum_probs=93.0

Q ss_pred             Cceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe--------EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          9 GRQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK--------YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         9 ~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |..+..+ .|...+..++.++. +.++++|+.||+|++|+...-..        .+.......+.++.+.+.+..++.++
T Consensus      1038 G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t 1117 (1431)
T KOG1240|consen 1038 GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVST 1117 (1431)
T ss_pred             ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEc
Confidence            4555444 78888888888765 48999999999999999864321        22233466788999999999999999


Q ss_pred             CCCeEEEeeCCC--CceE----Ee--------------------------------------------------cCCCCC
Q psy15612         79 KDNLLNAWRTPY--GASI----FQ--------------------------------------------------SKESSS  102 (131)
Q Consensus        79 ~~~~i~~w~~~~--~~~~----~~--------------------------------------------------~~~~~~  102 (131)
                      .||.|.+.++..  .+..    ..                                                  ....+.
T Consensus      1118 ~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~ 1197 (1431)
T KOG1240|consen 1118 KDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGL 1197 (1431)
T ss_pred             CCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccc
Confidence            999998887542  1100    00                                                  012467


Q ss_pred             eEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612        103 VLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus       103 v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      |++++.+|.++++++|...|.+.+||+|+
T Consensus      1198 vTSi~idp~~~WlviGts~G~l~lWDLRF 1226 (1431)
T KOG1240|consen 1198 VTSIVIDPWCNWLVIGTSRGQLVLWDLRF 1226 (1431)
T ss_pred             eeEEEecCCceEEEEecCCceEEEEEeec
Confidence            89999999999999999999999999986

>KOG2111|consensus

Probab=99.42  E-value=2.2e-10  Score=68.82  Aligned_cols=89  Identities=9%  Similarity=0.202  Sum_probs=71.5

Q ss_pred             EEEeCCCCce---eeeecCCCCeEEEEECCCCCEEEEEeCCCc-EEEEeCCCCCe-EEe--eccccceEEEEEccCCCEE
Q psy15612          2 YLQSVSPGRQ---LQQHDFSSQIFSLGYCPSGEWLAVGMENSN-VEVLHALKPDK-YQL--HLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         2 ~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-v~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~~   74 (131)
                      +|-|+...+.   .....|...|.+++++-+|..+|+++..|+ |++||..++.. .++  ......+++++|||+.+++
T Consensus       162 Qi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~L  241 (346)
T KOG2111|consen  162 QIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWL  241 (346)
T ss_pred             EEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEE
Confidence            4455543333   222389999999999999999999999887 78999998875 333  2356789999999999999


Q ss_pred             EEeCCCCeEEEeeCCC
Q psy15612         75 VSTGKDNLLNAWRTPY   90 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~   90 (131)
                      +++|..+++.+|.++.
T Consensus       242 avsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  242 AVSSDKGTLHIFSLRD  257 (346)
T ss_pred             EEEcCCCeEEEEEeec
Confidence            9999999999998764

>KOG2321|consensus

Probab=99.40  E-value=8.8e-12  Score=79.87  Aligned_cols=128  Identities=14%  Similarity=0.193  Sum_probs=100.4

Q ss_pred             CEEEeCCCCceeeeec-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EE------eecccc-----ceEEEEE
Q psy15612          1 MYLQSVSPGRQLQQHD-FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQ------LHLHES-----CVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~------~~~~~~-----~v~~~~~   67 (131)
                      |+-+++++|+-+..+. ..+.++++..++-..+|++|+.+|.|..||.+.... ..      +..+++     .|..+.|
T Consensus       157 vYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F  236 (703)
T KOG2321|consen  157 VYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKF  236 (703)
T ss_pred             eEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEe
Confidence            3556788888888774 447899999999999999999999999999987652 22      223333     4899999


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCCceEEecCC--CCCeEEEEECCC--CCEEEEecCCCcEEEEEe
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYGASIFQSKE--SSSVLSCDISAD--DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~--~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~  129 (131)
                      +.+|-.+++|...|.+.+||+++.+++....|  .-+|..+.|.+.  ++.+++. ....+++||-
T Consensus       237 ~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~  301 (703)
T KOG2321|consen  237 RDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDE  301 (703)
T ss_pred             cCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhccc
Confidence            99999999999999999999999998866555  466788888775  3445554 4567999974

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.38  E-value=6.7e-10  Score=69.99  Aligned_cols=128  Identities=11%  Similarity=0.069  Sum_probs=85.1

Q ss_pred             CEEEeCCCCceeeeecCCCC-eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC-
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQ-IFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG-   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-   78 (131)
                      |.+.|.++.+.+..+..... ...+.++|||+++++++.|+.+.++|+.+.+.............+++++||++++++. 
T Consensus        18 v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~   97 (369)
T PF02239_consen   18 VAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANY   97 (369)
T ss_dssp             EEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEE
T ss_pred             EEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEec
Confidence            45789899999888854444 4567899999999999999999999999988643333445678999999999988775 


Q ss_pred             CCCeEEEeeCCCCceEEecC--------CCCCeEEEEECCCCCEEEEecC-CCcEEEEE
Q psy15612         79 KDNLLNAWRTPYGASIFQSK--------ESSSVLSCDISADDKYIVTGSG-DKKATVYE  128 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~  128 (131)
                      ..+.+.++|.++.+.+....        ..+++..+-.+|....++..-. .+.+-+-|
T Consensus        98 ~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVd  156 (369)
T PF02239_consen   98 EPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVD  156 (369)
T ss_dssp             ETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEE
T ss_pred             CCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEE
Confidence            57899999999988772211        3456777877888775554433 35554444

...

>KOG0650|consensus

Probab=99.37  E-value=4.6e-12  Score=81.43  Aligned_cols=125  Identities=14%  Similarity=0.171  Sum_probs=99.8

Q ss_pred             EEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      |.++...+....+ ...+.|.++.|+|...++++++.. .|++||+...++ .++......+..++.+|.|..++.++.|
T Consensus       550 iHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d  628 (733)
T KOG0650|consen  550 IHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYD  628 (733)
T ss_pred             EEecccccccCchhhcCCceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCC
Confidence            4444444433334 455779999999999988888764 699999987664 4455556678999999999999999999


Q ss_pred             CeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         81 NLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        81 ~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +.+..+|+.-+...  .+.-|...+.+++|++.-.++++++.|+++.|+-
T Consensus       629 ~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfh  678 (733)
T KOG0650|consen  629 KKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFH  678 (733)
T ss_pred             CeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence            99999998755443  5667889999999999999999999999998874

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.35  E-value=2.5e-10  Score=72.25  Aligned_cols=118  Identities=10%  Similarity=0.101  Sum_probs=96.7

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      -++|.++++.....+.-+.|.++..+|+|+.++.+.....+.+.|+.++..+.+. ...+.|..+.|+|++++++-+--+
T Consensus       385 ~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~  464 (668)
T COG4946         385 GIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPE  464 (668)
T ss_pred             EEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCc
Confidence            4788887776666677788999999999999999988888999999999986664 355789999999999999977554


Q ss_pred             C----eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec
Q psy15612         81 N----LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        81 ~----~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      +    .|+++|+.+++..-.....+.-.+.+|.|++++|...+
T Consensus       465 gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         465 GYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             ceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEe
Confidence            4    59999999888875555666667889999999886544

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.33  E-value=4e-10  Score=72.38  Aligned_cols=111  Identities=9%  Similarity=0.028  Sum_probs=74.4

Q ss_pred             CCeEEEEECCCCCEEEEEe-CCCcEEEE--eCCC--CCeEEeeccccceEEEEEccCCCEEEEeCCC---CeEEEeeCCC
Q psy15612         19 SQIFSLGYCPSGEWLAVGM-ENSNVEVL--HALK--PDKYQLHLHESCVLSLRFAACGKWFVSTGKD---NLLNAWRTPY   90 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~-~~~~v~~~--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~i~~w~~~~   90 (131)
                      +......|+|||+.|+..+ .++...+|  ++..  +....+......+....|+|||+.++..+.+   ..|.+||+.+
T Consensus       281 ~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~  360 (428)
T PRK01029        281 GTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT  360 (428)
T ss_pred             CCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence            3446789999999887665 45544444  4432  2344444444566788999999988866443   4689999998


Q ss_pred             CceEEecCCCCCeEEEEECCCCCEEEEec-CC--CcEEEEEe
Q psy15612         91 GASIFQSKESSSVLSCDISADDKYIVTGS-GD--KKATVYEV  129 (131)
Q Consensus        91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d--~~i~vw~~  129 (131)
                      ++...+......+....|+|+|+.++... .+  ..+.++|+
T Consensus       361 g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl  402 (428)
T PRK01029        361 GRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISL  402 (428)
T ss_pred             CCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence            88764444445667899999999876433 22  34666664

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.33  E-value=3.2e-10  Score=72.79  Aligned_cols=129  Identities=15%  Similarity=0.115  Sum_probs=78.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC-CC--c--EEEEeCCCC---CeEEeecc-ccceEEEEEccCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME-NS--N--VEVLHALKP---DKYQLHLH-ESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~--~--v~~~~~~~~---~~~~~~~~-~~~v~~~~~~~~~   71 (131)
                      |.+.++.+++........+.....+|+|||+.|+.... ++  .  +..|++..+   ....+... ........|+|||
T Consensus       213 I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG  292 (428)
T PRK01029        213 IFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDG  292 (428)
T ss_pred             EEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCC
Confidence            34557776665554455556667899999998877543 22  2  334666542   33334332 2334578999999


Q ss_pred             CEEEEeC-CCCeEEEe--eCCC--CceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612         72 KWFVSTG-KDNLLNAW--RTPY--GASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV  129 (131)
Q Consensus        72 ~~~~~~~-~~~~i~~w--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~  129 (131)
                      +.|+..+ .++...+|  ++..  +....+......+....|+|+|+.++..+.+   ..|.+||+
T Consensus       293 ~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl  358 (428)
T PRK01029        293 TRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDL  358 (428)
T ss_pred             CEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEEC
Confidence            9877654 45544444  4432  2223333344566788999999988765442   35778875

>KOG1587|consensus

Probab=99.32  E-value=2.8e-10  Score=74.40  Aligned_cols=89  Identities=20%  Similarity=0.219  Sum_probs=71.3

Q ss_pred             CEEEeCCCC-ceeeeecCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-------EEeeccccceEEEEEccCC
Q psy15612          1 MYLQSVSPG-RQLQQHDFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-------YQLHLHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~   71 (131)
                      +.+|+++.. ++...+.....|.++.|+|. ...++.|..+|.|.+||++....       .....|...+..+.|..+.
T Consensus       224 ~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~  303 (555)
T KOG1587|consen  224 LLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNE  303 (555)
T ss_pred             EEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccC
Confidence            468999876 55556688899999999994 66778889999999999986543       2235688899999998754


Q ss_pred             CE--EEEeCCCCeEEEeeCC
Q psy15612         72 KW--FVSTGKDNLLNAWRTP   89 (131)
Q Consensus        72 ~~--~~~~~~~~~i~~w~~~   89 (131)
                      .-  |++++.||.|..|+++
T Consensus       304 ~~~~f~s~ssDG~i~~W~~~  323 (555)
T KOG1587|consen  304 HNTEFFSLSSDGSICSWDTD  323 (555)
T ss_pred             CCCceEEEecCCcEeeeecc
Confidence            44  8899999999999865

>KOG4547|consensus

Probab=99.31  E-value=4.8e-10  Score=71.84  Aligned_cols=127  Identities=13%  Similarity=0.106  Sum_probs=104.3

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |.+|++..++....+   .|.+.|.++.++.+-..|.+++.|..+..|+...... +.....+..+..+..+|||..+++
T Consensus        82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~  161 (541)
T KOG4547|consen   82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLT  161 (541)
T ss_pred             EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEe
Confidence            356777777776665   6889999999998888999999999999999988775 555667778899999999999988


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCC-----CCEEEEe-cCCCcEEEEEe
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISAD-----DKYIVTG-SGDKKATVYEV  129 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~-----~~~l~~~-~~d~~i~vw~~  129 (131)
                      +++  .|++||+.+++.+ ...+|.+.|.+++|-..     |.++.++ ..++-+.+|-+
T Consensus       162 as~--~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v  219 (541)
T KOG4547|consen  162 ASR--QIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVV  219 (541)
T ss_pred             ccc--eEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEE
Confidence            864  6999999999988 88899999999999766     6666554 34566777754

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.31  E-value=1.4e-09  Score=69.64  Aligned_cols=118  Identities=12%  Similarity=0.069  Sum_probs=80.8

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eC--CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-ME--NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~--~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |+++|+.+++........+......|+|||+.++.. +.  +..+.++++.++....+..+........|+|||+.++..
T Consensus       215 Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~  294 (419)
T PRK04043        215 LYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFV  294 (419)
T ss_pred             EEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEE
Confidence            467888888777666666667778999999877654 22  356888898888776665555434456899999987765


Q ss_pred             CC-CC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC
Q psy15612         78 GK-DN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        78 ~~-~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      +. .+  .|.+.|+.+++..........  ...|+|+|++++..+.
T Consensus       295 Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~--~~~~SPDG~~Ia~~~~  338 (419)
T PRK04043        295 SDRLGYPNIFMKKLNSGSVEQVVFHGKN--NSSVSTYKNYIVYSSR  338 (419)
T ss_pred             ECCCCCceEEEEECCCCCeEeCccCCCc--CceECCCCCEEEEEEc
Confidence            43 33  577778887776422221211  2489999998876554

>KOG1310|consensus

Probab=99.29  E-value=2.2e-11  Score=77.91  Aligned_cols=78  Identities=21%  Similarity=0.414  Sum_probs=69.9

Q ss_pred             EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECC--CCCEEEEecCCCcEEEEE
Q psy15612         53 YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISA--DDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        53 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~vw~  128 (131)
                      ..+.+|.+.|.++.|+.+|.++++|+.|-.+.|||....+.+  ...+|.+.|.++.|-|  +.+.+++|..|..|+++|
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd  123 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD  123 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence            457899999999999999999999999999999999877776  6678999999999998  456788999999999999


Q ss_pred             ee
Q psy15612        129 VI  130 (131)
Q Consensus       129 ~~  130 (131)
                      +.
T Consensus       124 l~  125 (758)
T KOG1310|consen  124 LD  125 (758)
T ss_pred             cc
Confidence            74

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.29  E-value=3.5e-10  Score=71.26  Aligned_cols=96  Identities=15%  Similarity=0.226  Sum_probs=72.7

Q ss_pred             EEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCC
Q psy15612         34 AVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADD  112 (131)
Q Consensus        34 ~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~  112 (131)
                      ++-..++.|.+.|..+.+. ..+.........+.++|||++++++++|+.+.++|+.+.+.+.....+.....++++++|
T Consensus        10 V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG   89 (369)
T PF02239_consen   10 VVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDG   89 (369)
T ss_dssp             EEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TT
T ss_pred             EEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCC
Confidence            4455689999999998885 455544444556889999999999999999999999999988655667778999999999


Q ss_pred             CEEEEec-CCCcEEEEEe
Q psy15612        113 KYIVTGS-GDKKATVYEV  129 (131)
Q Consensus       113 ~~l~~~~-~d~~i~vw~~  129 (131)
                      +++++++ .++.+.++|.
T Consensus        90 ~~~~v~n~~~~~v~v~D~  107 (369)
T PF02239_consen   90 KYVYVANYEPGTVSVIDA  107 (369)
T ss_dssp             TEEEEEEEETTEEEEEET
T ss_pred             CEEEEEecCCCceeEecc
Confidence            9998776 4788999985

...

>KOG1587|consensus

Probab=99.29  E-value=7.4e-11  Score=77.01  Aligned_cols=115  Identities=11%  Similarity=0.139  Sum_probs=89.5

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-CCC-eEEeeccccceEEEEEccCC-CEEEEeCCCCeEEEeeCCCCc
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL-KPD-KYQLHLHESCVLSLRFAACG-KWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~-~~~-~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      .|.+.|.++.++|=+..++..+.|-++++|... ... +..+..+...+.+++|||-- ..|+++..+|.+.+||+....
T Consensus       396 ~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~  475 (555)
T KOG1587|consen  396 THIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDD  475 (555)
T ss_pred             ccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccc
Confidence            578899999999977766555558999999987 332 34455666779999999964 467888889999999987543


Q ss_pred             eE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         93 SI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        93 ~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..   ...........+.|+++|+.++.|...|++.+|++.
T Consensus       476 ~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~  516 (555)
T KOG1587|consen  476 EEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLS  516 (555)
T ss_pred             cCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence            32   333345667788889999999999999999999873

>KOG3881|consensus

Probab=99.28  E-value=6.8e-11  Score=72.56  Aligned_cols=111  Identities=16%  Similarity=0.158  Sum_probs=89.8

Q ss_pred             CEEEeCCCCc-eeeeec-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGR-QLQQHD-FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      ||+||.+.++ ++..+. .+..+.++...|+++++++|..-+.+..||+++++.  ..+.+..+.+.++..+|..+++++
T Consensus       228 vR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las  307 (412)
T KOG3881|consen  228 VRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLAS  307 (412)
T ss_pred             EEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEe
Confidence            5899998654 455553 456799999999999999999999999999999886  346778899999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCC
Q psy15612         77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISAD  111 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~  111 (131)
                      ++-|+.++|+|+.+.+.+....-.+.++++-+.++
T Consensus       308 ~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~  342 (412)
T KOG3881|consen  308 CGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDD  342 (412)
T ss_pred             eccceeEEEeecccchhhhhhhhhccccEEEecCC
Confidence            99999999999998666644334455666666543

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.28  E-value=1.9e-09  Score=68.39  Aligned_cols=115  Identities=10%  Similarity=0.070  Sum_probs=99.0

Q ss_pred             ecCCCCeEEEEECCCCCEEEEEeCCC-cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612         15 HDFSSQIFSLGYCPSGEWLAVGMENS-NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        15 ~~~~~~v~~~~~~~~~~~l~~~~~~~-~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~   93 (131)
                      +++.+.|.-..+..+++-++.|..|+ .+-++|..+++...+...-+.|..++.+|+|++++.+.....+.+.|+.+|..
T Consensus       356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv  435 (668)
T COG4946         356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV  435 (668)
T ss_pred             cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence            35677788888888888888898888 89999999999888888889999999999999999999888999999999998


Q ss_pred             E-EecCCCCCeEEEEECCCCCEEEEecCCC----cEEEEEe
Q psy15612         94 I-FQSKESSSVLSCDISADDKYIVTGSGDK----KATVYEV  129 (131)
Q Consensus        94 ~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~vw~~  129 (131)
                      . ......+-|..+.|+|++++++-+-.+|    .|+++|.
T Consensus       436 ~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm  476 (668)
T COG4946         436 RLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDM  476 (668)
T ss_pred             eEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEec
Confidence            7 5555678899999999999998776554    5777775

>KOG0280|consensus

Probab=99.26  E-value=4.7e-10  Score=66.88  Aligned_cols=110  Identities=22%  Similarity=0.225  Sum_probs=88.3

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccC-CCEEEEeCCCCeEEEeeCCC-CceE-
Q psy15612         21 IFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAAC-GKWFVSTGKDNLLNAWRTPY-GASI-   94 (131)
Q Consensus        21 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~~-~~~~-   94 (131)
                      ..++.|++.+..+++...+|.+.+.+.....+   ...+.|+.+..-..|+.. .+.+++|+.|+.+..||++. ++.+ 
T Consensus       124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~  203 (339)
T KOG0280|consen  124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW  203 (339)
T ss_pred             eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence            46788888888899998899888666655544   345778888888888864 46788999999999999994 3444 


Q ss_pred             -EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612         95 -FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~  130 (131)
                       ....|...|.++.-+| .+.++++|+.|..+++||.|
T Consensus       204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR  241 (339)
T KOG0280|consen  204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTR  241 (339)
T ss_pred             ecceeeecceEEEecCCCCCceEEEeccccceeeeehh
Confidence             2456889999999886 57799999999999999987

>KOG3914|consensus

Probab=99.25  E-value=5.1e-11  Score=73.16  Aligned_cols=91  Identities=14%  Similarity=0.195  Sum_probs=74.5

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eE-EeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KY-QLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      +|....+.+...++|-..++.++++||++++++++.|..|++-...... .. ...+|+..|..++.-+ +..+++++.|
T Consensus       136 i~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD  214 (390)
T KOG3914|consen  136 ILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGD  214 (390)
T ss_pred             eecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCC
Confidence            3444446666667999999999999999999999999999997776444 33 3467999999998876 4558899999


Q ss_pred             CeEEEeeCCCCceE
Q psy15612         81 NLLNAWRTPYGASI   94 (131)
Q Consensus        81 ~~i~~w~~~~~~~~   94 (131)
                      +++++||+.+|+.+
T Consensus       215 ~tlr~Wd~~sgk~L  228 (390)
T KOG3914|consen  215 KTLRLWDITSGKLL  228 (390)
T ss_pred             CcEEEEecccCCcc
Confidence            99999999999876

>KOG2321|consensus

Probab=99.24  E-value=2.4e-10  Score=73.55  Aligned_cols=126  Identities=15%  Similarity=0.198  Sum_probs=97.7

Q ss_pred             CEEEeCCCCceeeeec-------CCC-----CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc--ccceEEEE
Q psy15612          1 MYLQSVSPGRQLQQHD-------FSS-----QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH--ESCVLSLR   66 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~-------~~~-----~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--~~~v~~~~   66 (131)
                      |..||.++......+.       +.+     .|.++.|+.+|-.+++|..+|.+.+||++..+...+..|  ..+|..+.
T Consensus       199 VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~  278 (703)
T KOG2321|consen  199 VEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLD  278 (703)
T ss_pred             EEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeec
Confidence            4679988776665552       222     399999999999999999999999999998886555444  55788898


Q ss_pred             EccC--CCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         67 FAAC--GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        67 ~~~~--~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      |.+.  ++.+++. ....+++||-.+|+..........+..+++-|++-+++++..+..+..|
T Consensus       279 ~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~y  340 (703)
T KOG2321|consen  279 WQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTY  340 (703)
T ss_pred             ccccCCCceEEec-chHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcceeE
Confidence            9775  3344443 3567899999999999766777779999999999999998877766554

>KOG4547|consensus

Probab=99.23  E-value=2.2e-09  Score=68.89  Aligned_cols=128  Identities=18%  Similarity=0.134  Sum_probs=101.5

Q ss_pred             CEEEeCCCCceeeee----cCCCCeEEEEE------CC--------------CCCEEEEEeCCCcEEEEeCCCCCeE-Ee
Q psy15612          1 MYLQSVSPGRQLQQH----DFSSQIFSLGY------CP--------------SGEWLAVGMENSNVEVLHALKPDKY-QL   55 (131)
Q Consensus         1 i~iwd~~~~~~~~~~----~~~~~v~~~~~------~~--------------~~~~l~~~~~~~~v~~~~~~~~~~~-~~   55 (131)
                      +++||+.+++....+    ...+...+..|      +|              +-..++.|...|.+.+|+...+++. ++
T Consensus        17 l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~   96 (541)
T KOG4547|consen   17 LRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLLYSVAGGEITAKL   96 (541)
T ss_pred             EEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEEEEecCCeEEEEE
Confidence            589999988777665    22334444444      22              2224677888999999999999873 33


Q ss_pred             --eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         56 --HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        56 --~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                        ..|.+.|.++.++.+-.+|.+++.|..+..|+...+... ........+.+++.+|||..+++++  ++|++||+.
T Consensus        97 st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~  172 (541)
T KOG4547|consen   97 STDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIE  172 (541)
T ss_pred             ecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEcc
Confidence              468999999999999999999999999999999988877 5666788899999999999998886  689999974

>KOG0322|consensus

Probab=99.22  E-value=6.2e-11  Score=69.68  Aligned_cols=70  Identities=17%  Similarity=0.257  Sum_probs=63.6

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeC
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT   88 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~   88 (131)
                      ..|..+.+.||++.+++++.|+.+++|+.++... ..+.-|...|.+++|+|+...++.++.|..|.+|++
T Consensus       252 pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  252 PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            4578899999999999999999999999998875 456778999999999999999999999999999985

>KOG0644|consensus

Probab=99.19  E-value=1.4e-11  Score=82.00  Aligned_cols=124  Identities=20%  Similarity=0.232  Sum_probs=95.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      ++||.++++.++... +|.+.+..++.+....++++++.|.-|++|-+..+.. ..+.+|++.|..++|+|-.    +.+
T Consensus       214 vKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss  289 (1113)
T KOG0644|consen  214 VKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSS  289 (1113)
T ss_pred             eeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCC
Confidence            589999999999888 9999999999999999999999999999999998875 5578999999999999964    778


Q ss_pred             CCCeEEEeeCCCCceEEe-----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         79 KDNLLNAWRTPYGASIFQ-----SKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      .|+++++||.+-....+.     ......+.++.|...+.-+.+++.|+....|.
T Consensus       290 ~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e  344 (1113)
T KOG0644|consen  290 DDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHE  344 (1113)
T ss_pred             CCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccch
Confidence            899999999871111111     11224455555555566666666666555553

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.19  E-value=2.6e-08  Score=62.55  Aligned_cols=129  Identities=12%  Similarity=0.217  Sum_probs=84.6

Q ss_pred             CEEEeCCCCc--eee----eecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCC--CCCeEE---eec----c--ccce
Q psy15612          1 MYLQSVSPGR--QLQ----QHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHAL--KPDKYQ---LHL----H--ESCV   62 (131)
Q Consensus         1 i~iwd~~~~~--~~~----~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~--~~~~~~---~~~----~--~~~v   62 (131)
                      |++|++....  ...    .+........+.|+|++++++.. ..+++|.++++.  .+....   +..    .  ....
T Consensus       168 v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  247 (345)
T PF10282_consen  168 VYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAP  247 (345)
T ss_dssp             EEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSE
T ss_pred             EEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCc
Confidence            3566665443  321    22556778999999999987665 456779999887  333221   111    1  1257


Q ss_pred             EEEEEccCCCEEEEeCC-CCeEEEeeCC--CCceE---EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612         63 LSLRFAACGKWFVSTGK-DNLLNAWRTP--YGASI---FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~-~~~i~~w~~~--~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~  129 (131)
                      ..+.++|||++++++.+ .+.|.+|++.  +++..   .....+..+..++++|+|++|+++.. ++.|.+|++
T Consensus       248 ~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~  321 (345)
T PF10282_consen  248 AEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDI  321 (345)
T ss_dssp             EEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred             eeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEE
Confidence            78999999999887654 5679999983  45544   22223556899999999999987764 678999876

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG4497|consensus

Probab=99.18  E-value=2.7e-10  Score=69.10  Aligned_cols=116  Identities=10%  Similarity=0.152  Sum_probs=88.0

Q ss_pred             eCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEE-EeCCCC
Q psy15612          5 SVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFV-STGKDN   81 (131)
Q Consensus         5 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~   81 (131)
                      |.++-+..+.+..-..|.-+.|..+..+++++ ..++.|.+|++...+- .++......+....|||||+.++ +...+-
T Consensus        35 d~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~l  114 (447)
T KOG4497|consen   35 DSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDL  114 (447)
T ss_pred             ccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeeccee
Confidence            33444433333334567788898888776654 5677999999988875 56777888899999999998765 566688


Q ss_pred             eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC
Q psy15612         82 LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        82 ~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      .|.+|.+.+.+.....-....+..++|+|+|++.+..+.
T Consensus       115 riTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sR  153 (447)
T KOG4497|consen  115 RITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSR  153 (447)
T ss_pred             EEEEEEeccceeEEecccccCceeEEECCCCceeeeeec
Confidence            899999998887766556666789999999999877654

>KOG1409|consensus

Probab=99.18  E-value=9.9e-10  Score=66.85  Aligned_cols=74  Identities=20%  Similarity=0.340  Sum_probs=65.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~   89 (131)
                      +|.+.+.++.|.|....|.+|..|..+.+||+...+  .....+|...|..+...+.-+.+.+++.|+.|.+|++.
T Consensus       195 ~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  195 GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             CcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence            789999999999999999999999999999997655  46677888888888888888889999999999999965

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=99.18  E-value=1.4e-08  Score=65.63  Aligned_cols=114  Identities=10%  Similarity=0.052  Sum_probs=83.1

Q ss_pred             cCCCCeEEEEECC-CCCEEEEE----eCCCc----EEEEeCCCCCeEE----eeccccceEEEEEccCCCEEEEeCCCCe
Q psy15612         16 DFSSQIFSLGYCP-SGEWLAVG----MENSN----VEVLHALKPDKYQ----LHLHESCVLSLRFAACGKWFVSTGKDNL   82 (131)
Q Consensus        16 ~~~~~v~~~~~~~-~~~~l~~~----~~~~~----v~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~   82 (131)
                      ..+....++.|+. ++..+.+.    +.++.    ..+|+....+.+.    ....++.+.+++++|+...++.|+.||.
T Consensus       203 rTE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgS  282 (545)
T PF11768_consen  203 RTENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGS  282 (545)
T ss_pred             EecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCe
Confidence            3444556777775 34455443    22333    3457766555422    2346778999999999999999999999


Q ss_pred             EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         83 LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        83 i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |.+||...+..... ...-.+..++|+|+|..+++++..|.+.+||++
T Consensus       283 iiLyD~~~~~t~~~-ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A  329 (545)
T PF11768_consen  283 IILYDTTRGVTLLA-KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA  329 (545)
T ss_pred             EEEEEcCCCeeeee-eecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence            99999876644422 344567899999999999999999999999985

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.18  E-value=1.5e-08  Score=71.43  Aligned_cols=111  Identities=12%  Similarity=0.071  Sum_probs=81.3

Q ss_pred             CeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeEEeec----------------------cccceEEEEEccCCCEEEE
Q psy15612         20 QIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKYQLHL----------------------HESCVLSLRFAACGKWFVS   76 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~~~~~----------------------~~~~v~~~~~~~~~~~~~~   76 (131)
                      ....++++|++..|+ +...++.|++||+.++....+.+                      .-..+..++++++|..+++
T Consensus       741 ~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVA  820 (1057)
T PLN02919        741 QPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVA  820 (1057)
T ss_pred             CccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEE
Confidence            356799999988554 55567899999988655321110                      0123568999999998888


Q ss_pred             eCCCCeEEEeeCCCCceEEecCC--------------CCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASIFQSKE--------------SSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      -..++.|++||..++......+.              -..+..++++++|+.+++-+.++.|++||+.
T Consensus       821 Ds~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~  888 (1057)
T PLN02919        821 DSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLN  888 (1057)
T ss_pred             ECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECC
Confidence            88899999999987766522211              1357789999999988888888999999974

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.17  E-value=2.9e-08  Score=63.73  Aligned_cols=102  Identities=10%  Similarity=-0.008  Sum_probs=72.6

Q ss_pred             CCeEEEEECCCCCE-EEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCC--CeEEEeeCCCC
Q psy15612         19 SQIFSLGYCPSGEW-LAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKD--NLLNAWRTPYG   91 (131)
Q Consensus        19 ~~v~~~~~~~~~~~-l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~--~~i~~w~~~~~   91 (131)
                      +......|+|||+. ++..+.   ...|.++|+.+++...+....+......|+|||+.++.. +.+  ..|.++|+.++
T Consensus       188 ~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g  267 (419)
T PRK04043        188 GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK  267 (419)
T ss_pred             CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            36789999999985 554433   356888999988877766666666778899999877643 333  46788888877


Q ss_pred             ceEEecCCCCCeEEEEECCCCCEEEEecC
Q psy15612         92 ASIFQSKESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      +...+...........|+|||+.++..+.
T Consensus       268 ~~~~LT~~~~~d~~p~~SPDG~~I~F~Sd  296 (419)
T PRK04043        268 TLTQITNYPGIDVNGNFVEDDKRIVFVSD  296 (419)
T ss_pred             cEEEcccCCCccCccEECCCCCEEEEEEC
Confidence            76544444444456789999998876553

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.17  E-value=2.1e-10  Score=49.08  Aligned_cols=34  Identities=29%  Similarity=0.391  Sum_probs=32.1

Q ss_pred             EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         95 FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ...+|.+.|.+++|+|+++++++++.|+.|++||
T Consensus         6 ~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    6 TFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             EEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            5678999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.16  E-value=2.3e-10  Score=48.96  Aligned_cols=37  Identities=27%  Similarity=0.527  Sum_probs=34.0

Q ss_pred             ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q psy15612         10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLH   46 (131)
Q Consensus        10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~   46 (131)
                      +++..+ +|.+.|.+++|+|++..+++++.|+.+++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            566666 8999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1517|consensus

Probab=99.16  E-value=7.2e-10  Score=75.87  Aligned_cols=128  Identities=15%  Similarity=0.193  Sum_probs=96.4

Q ss_pred             CEEEeCCCCce---eeee-cCCCC--eEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe---EEeecc---ccceEEEEE
Q psy15612          1 MYLQSVSPGRQ---LQQH-DFSSQ--IFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK---YQLHLH---ESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~~~---~~~~-~~~~~--v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~---~~~~~~---~~~v~~~~~   67 (131)
                      ||+||.+....   +... .|+..  |..+.+.+.|- .|++|+.+|.|.+||++....   ..+..|   .+...++..
T Consensus      1233 vRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~V 1312 (1387)
T KOG1517|consen 1233 VRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTV 1312 (1387)
T ss_pred             eEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeee
Confidence            68899875433   3333 67766  99999988665 499999999999999998432   222222   235889999


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCCceE-------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYGASI-------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +++...+++|+. ..|.||++...+..       +.....+.+.|++|+|..-.++.|+.|.+|.+|..
T Consensus      1313 H~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1313 HEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSC 1380 (1387)
T ss_pred             ccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeec
Confidence            999999999987 89999998733322       22234567799999999889999999999999863

>KOG1963|consensus

Probab=99.14  E-value=2.3e-09  Score=71.60  Aligned_cols=114  Identities=13%  Similarity=0.128  Sum_probs=94.1

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--   94 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--   94 (131)
                      |...|.++.|+++|..|++|+.++-+.+|.+.+++...++.-.+.|..+.++||+...+....|+.|.+....+-+..  
T Consensus       250 H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~t  329 (792)
T KOG1963|consen  250 HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKST  329 (792)
T ss_pred             cccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhh
Confidence            667899999999999999999999999999999997667777889999999999999999999999998876443322  


Q ss_pred             --Ee--------cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 --FQ--------SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 --~~--------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                        ..        ....+-...++++|..+.++..+..+.|.+||+.
T Consensus       330 Isgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~  375 (792)
T KOG1963|consen  330 ISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLY  375 (792)
T ss_pred             ccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEecc
Confidence              11        1135667888999977777777888999999873

>KOG1064|consensus

Probab=99.13  E-value=6.7e-10  Score=79.44  Aligned_cols=128  Identities=10%  Similarity=0.215  Sum_probs=101.6

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++|....++.+...  ..+..|..+.|+.+|+.+..+..||.+.+|.+.......-..|.....+++|-.  ..+++++
T Consensus      2232 v~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi~--s~~~tag 2309 (2439)
T KOG1064|consen 2232 VRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFIG--SLLATAG 2309 (2439)
T ss_pred             EEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcceeccccCCccccceeeee--hhhhccc
Confidence            467777777766655  334789999999999999999999999999998544455677887788888864  5566553


Q ss_pred             ---CCCeEEEeeCCCC--ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 ---KDNLLNAWRTPYG--ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ---~~~~i~~w~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                         .++.+.+||..-.  .......|.+.++++++-|..+.+++|+.+|.+.+||++
T Consensus      2310 ~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~r 2366 (2439)
T KOG1064|consen 2310 RSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIR 2366 (2439)
T ss_pred             cCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehH
Confidence               3577999997532  233557899999999999999999999999999999986

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=99.10  E-value=1e-08  Score=66.30  Aligned_cols=73  Identities=18%  Similarity=0.244  Sum_probs=63.5

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~   89 (131)
                      ..+..+.+++++|+...++.|+.||.|.+||...+... .....-.+..++|+|+|..+++++..|.+.+||+.
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~-~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A  329 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL-LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA  329 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee-eeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence            67889999999999999999999999999999766433 22344567899999999999999999999999976

>KOG2041|consensus

Probab=99.07  E-value=4.2e-09  Score=69.98  Aligned_cols=111  Identities=15%  Similarity=0.208  Sum_probs=94.1

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----------------eEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----------------KYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      ..+....+++|+....++++|+.||.+++..+.+..                -+.+.+|.+.|.-+.|+...+.+.++..
T Consensus        12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt   91 (1189)
T KOG2041|consen   12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT   91 (1189)
T ss_pred             CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence            455678899999999999999999999998775432                0246789999999999999999999999


Q ss_pred             CCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612         80 DNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATV  126 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  126 (131)
                      +|.|.+|-+-.|...   ......+.|.+++|+.+|..+.....||.|.|
T Consensus        92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIV  141 (1189)
T KOG2041|consen   92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIV  141 (1189)
T ss_pred             CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEE
Confidence            999999999988876   44457788999999999999988888887765

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.04  E-value=1.4e-07  Score=56.29  Aligned_cols=113  Identities=15%  Similarity=0.232  Sum_probs=77.2

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee----------------------------------------
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH----------------------------------------   56 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~----------------------------------------   56 (131)
                      ...+-..++|+||+..|+.+...|+|++||+.+.++..+.                                        
T Consensus        42 ~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L  121 (282)
T PF15492_consen   42 PNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQL  121 (282)
T ss_pred             CCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEecccee
Confidence            3445688999999999999999999999998754321000                                        


Q ss_pred             -----------------------ccccceEEEEEccCCCEEEEeCCCC-----------eEEEeeCCCCceE--------
Q psy15612         57 -----------------------LHESCVLSLRFAACGKWFVSTGKDN-----------LLNAWRTPYGASI--------   94 (131)
Q Consensus        57 -----------------------~~~~~v~~~~~~~~~~~~~~~~~~~-----------~i~~w~~~~~~~~--------   94 (131)
                                             .++..|.++.++|.-+.++.++...           .+..|.+-++.+-        
T Consensus       122 ~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~  201 (282)
T PF15492_consen  122 RSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSE  201 (282)
T ss_pred             eeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccC
Confidence                                   1233566677777767766654421           2455543322110        


Q ss_pred             ----------------------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         95 ----------------------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        95 ----------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                                            ........|..++.||+|+.|++..-+|.+.+|++
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~i  258 (282)
T PF15492_consen  202 DDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEI  258 (282)
T ss_pred             ccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEec
Confidence                                  00123567899999999999999999999999986

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.03  E-value=1.3e-07  Score=59.15  Aligned_cols=96  Identities=14%  Similarity=0.030  Sum_probs=70.1

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCCe-EEeecc-------ccce
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME----------NSNVEVLHALKPDK-YQLHLH-------ESCV   62 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------~~~v~~~~~~~~~~-~~~~~~-------~~~v   62 (131)
                      |.+.|..+++.+..+........+ ++||++.++.+..          +..|.+||..+.+. ..+...       ....
T Consensus        29 v~ViD~~~~~v~g~i~~G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~  107 (352)
T TIGR02658        29 VYTIDGEAGRVLGMTDGGFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYP  107 (352)
T ss_pred             EEEEECCCCEEEEEEEccCCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCcc
Confidence            457888888888777443333344 9999998877654          67899999999885 333321       2234


Q ss_pred             EEEEEccCCCEEEEeCC--CCeEEEeeCCCCceEEec
Q psy15612         63 LSLRFAACGKWFVSTGK--DNLLNAWRTPYGASIFQS   97 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~~~~   97 (131)
                      ..++++|||++++....  ++.+.+.|+.+++.+...
T Consensus       108 ~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei  144 (352)
T TIGR02658       108 WMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMM  144 (352)
T ss_pred             ceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEE
Confidence            48899999999987753  688999999999988433

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG4532|consensus

Probab=99.02  E-value=5e-08  Score=58.02  Aligned_cols=99  Identities=13%  Similarity=0.155  Sum_probs=74.3

Q ss_pred             EEEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEE
Q psy15612         33 LAVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCD  107 (131)
Q Consensus        33 l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~  107 (131)
                      +..++.|.+++++++..+.... +....-...++.+++|++++++.+..+.+..|.+.....-    ......+.-.+.+
T Consensus       131 ~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S  210 (344)
T KOG4532|consen  131 LNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNS  210 (344)
T ss_pred             eeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeee
Confidence            4556778888888876554322 1111123778999999999999999999999988654332    3445566667899


Q ss_pred             ECCCCCEEEEecCCCcEEEEEeeC
Q psy15612        108 ISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus       108 ~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      |+.....++++..||++.|||+||
T Consensus       211 ~s~~~~~FAv~~Qdg~~~I~DVR~  234 (344)
T KOG4532|consen  211 FSENDLQFAVVFQDGTCAIYDVRN  234 (344)
T ss_pred             eccCcceEEEEecCCcEEEEEecc
Confidence            999999999999999999999986

>KOG0280|consensus

Probab=99.01  E-value=8.6e-09  Score=61.69  Aligned_cols=96  Identities=13%  Similarity=0.200  Sum_probs=77.1

Q ss_pred             cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEcc-CCCEEEEeCCCCeEEEeeCCC
Q psy15612         16 DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAA-CGKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        16 ~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~   90 (131)
                      .|+-+....+|+.. .+.+.+|+.|+.+..||++....   .....|...|.++.-+| ++.++++|+.|..|++||.++
T Consensus       163 ~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn  242 (339)
T KOG0280|consen  163 VHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN  242 (339)
T ss_pred             ccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence            56777788888653 46788999999999999994332   33456888899988876 577999999999999999995


Q ss_pred             -CceEEecCCCCCeEEEEECCC
Q psy15612         91 -GASIFQSKESSSVLSCDISAD  111 (131)
Q Consensus        91 -~~~~~~~~~~~~v~~~~~~~~  111 (131)
                       +++++.....+.|..+.++|.
T Consensus       243 m~kPl~~~~v~GGVWRi~~~p~  264 (339)
T KOG0280|consen  243 MGKPLFKAKVGGGVWRIKHHPE  264 (339)
T ss_pred             ccCccccCccccceEEEEecch
Confidence             666677777799999999884

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.00  E-value=3.6e-07  Score=56.16  Aligned_cols=110  Identities=15%  Similarity=0.137  Sum_probs=82.3

Q ss_pred             CeEEEEECCCCCEEEEEeC-CCcEEEEeCCC-CCe---EEeeccccc----------eEEEEEccCCCEEEEeCC-CCeE
Q psy15612         20 QIFSLGYCPSGEWLAVGME-NSNVEVLHALK-PDK---YQLHLHESC----------VLSLRFAACGKWFVSTGK-DNLL   83 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~-~~~---~~~~~~~~~----------v~~~~~~~~~~~~~~~~~-~~~i   83 (131)
                      ....+++++++++++++.. .+.|.++.+.. +.+   .....|.+.          +....+.|+++++++..- ...+
T Consensus        90 ~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri  169 (346)
T COG2706          90 PPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI  169 (346)
T ss_pred             CCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence            3478899999999988765 46788888854 332   122333333          788999999999887643 3458


Q ss_pred             EEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612         84 NAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus        84 ~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~  129 (131)
                      .+|++..|+..    .....+.....+.|+|++++.+..++ +++|.+|..
T Consensus       170 ~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y  220 (346)
T COG2706         170 FLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEY  220 (346)
T ss_pred             EEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEE
Confidence            89999988765    33467788899999999999877766 889999975

>KOG2695|consensus

Probab=98.99  E-value=3.6e-09  Score=64.60  Aligned_cols=115  Identities=15%  Similarity=0.190  Sum_probs=88.0

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-----eEEeeccccceEEEEEcc-CCCEEEEeCCCCeEEEeeCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-----KYQLHLHESCVLSLRFAA-CGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-----~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~   89 (131)
                      ...+.|.++.|.-.++.+..|..+|.|..+|++.+.     +....-|.+.+.++..-. +++++.+.+.+++|++||.+
T Consensus       250 ~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R  329 (425)
T KOG2695|consen  250 QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLR  329 (425)
T ss_pred             ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeeh
Confidence            345678899999889999999999999999998652     344556888899887665 78899999999999999998


Q ss_pred             CCce---E-EecCCC--CCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         90 YGAS---I-FQSKES--SSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        90 ~~~~---~-~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .-++   + .-.+|-  ....-+...+....+++++.|-..++|.+.
T Consensus       330 ~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~  376 (425)
T KOG2695|consen  330 ATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLD  376 (425)
T ss_pred             hhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecc
Confidence            6665   3 223332  222334456677788889999999999874

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.98  E-value=2.7e-08  Score=63.81  Aligned_cols=120  Identities=14%  Similarity=0.099  Sum_probs=81.6

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCc--EEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSN--VEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~--v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      ++++|+.+++.......++.-...+|+|||+.|+.. ..++.  +.++|+.+.....+....+.-..-.|+|||++++..
T Consensus       220 i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~  299 (425)
T COG0823         220 IYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFT  299 (425)
T ss_pred             EEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEE
Confidence            356788888777777666777788999999988654 34444  667788777765555444444477899999998755


Q ss_pred             -CCCCe--EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC
Q psy15612         78 -GKDNL--LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        78 -~~~~~--i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                       ++.+.  |.+.+...+...........-....|+|+|++++..+.
T Consensus       300 Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~  345 (425)
T COG0823         300 SDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESS  345 (425)
T ss_pred             eCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEec
Confidence             44444  55667766655433333333337889999999987664

>KOG1334|consensus

Probab=98.97  E-value=4.7e-09  Score=66.53  Aligned_cols=115  Identities=13%  Similarity=0.116  Sum_probs=94.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEcc--CCCEEEEeCCCCeEEEeeCC-C
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAA--CGKWFVSTGKDNLLNAWRTP-Y   90 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~~-~   90 (131)
                      .|.+.|..+.|+..|..+++++.|..+.+||......  ....+|...|...+|-|  +.+.++++++|+.+++=.+. +
T Consensus       140 ~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t  219 (559)
T KOG1334|consen  140 KHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILET  219 (559)
T ss_pred             CCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccc
Confidence            7899999999999999999999999999999876653  44567888999999988  45678999999999876654 3


Q ss_pred             CceE---EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         91 GASI---FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        91 ~~~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      +.+.   .+..|.+.+..++.-|+.. .|.+++.|+.+.-.|++
T Consensus       220 ~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr  263 (559)
T KOG1334|consen  220 GYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLR  263 (559)
T ss_pred             cceecceecccccCccceeeecCCCCCcccccccccceeeeeec
Confidence            3333   5567999999999999765 47788899998888875

>KOG4532|consensus

Probab=98.95  E-value=4.9e-07  Score=53.95  Aligned_cols=111  Identities=11%  Similarity=0.018  Sum_probs=82.8

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---E-EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---Y-QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-   94 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-   94 (131)
                      .+.++.++++++++++.+....|..|.+.....   . ........-.+..|+.....++++..|+.+.+||++.-..+ 
T Consensus       160 ~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm  239 (344)
T KOG4532|consen  160 TQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPM  239 (344)
T ss_pred             ceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccch
Confidence            378999999999999999999999998864432   2 22223334568889999999999999999999999865443 


Q ss_pred             -----EecCCCCCeEEEEECCCCC--EEEEecCCCcEEEEEee
Q psy15612         95 -----FQSKESSSVLSCDISADDK--YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 -----~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~vw~~~  130 (131)
                           ....|.+.+..+.|++.|.  +|...-.-+.+.+.|+|
T Consensus       240 ~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R  282 (344)
T KOG4532|consen  240 AEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTR  282 (344)
T ss_pred             hhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcc
Confidence                 2234789999999998664  33333344678888775

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.94  E-value=2.6e-07  Score=61.25  Aligned_cols=127  Identities=11%  Similarity=0.037  Sum_probs=87.8

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC----------------------------------------CCcE
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME----------------------------------------NSNV   42 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------------------------------------~~~v   42 (131)
                      +.|.++.+...++...+....++++|+|+++++.+.                                        ++.|
T Consensus       219 vID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V  298 (635)
T PRK02888        219 AVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKV  298 (635)
T ss_pred             EEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEE
Confidence            446666666555544445556677777777766541                                        2347


Q ss_pred             EEEeCCC-----CCeEEeeccccceEEEEEccCCCEEEEeCC-CCeEEEeeCCCCce------------EEecCCCCCeE
Q psy15612         43 EVLHALK-----PDKYQLHLHESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPYGAS------------IFQSKESSSVL  104 (131)
Q Consensus        43 ~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~------------~~~~~~~~~v~  104 (131)
                      .+.|..+     ........-...+..+.++|||+++++++. ++++.+.|+.+.+.            ......+....
T Consensus       299 ~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPL  378 (635)
T PRK02888        299 PVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPL  378 (635)
T ss_pred             EEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcc
Confidence            7777776     233333334556789999999999876654 78899999987553            12223456677


Q ss_pred             EEEECCCCCEEEEecCCCcEEEEEe
Q psy15612        105 SCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       105 ~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ..+|.++|+...+...|.++..||+
T Consensus       379 HTaFDg~G~aytslf~dsqv~kwn~  403 (635)
T PRK02888        379 HTAFDGRGNAYTTLFLDSQIVKWNI  403 (635)
T ss_pred             eEEECCCCCEEEeEeecceeEEEeh
Confidence            8999999998888888999999996

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.91  E-value=2.1e-06  Score=54.09  Aligned_cols=114  Identities=13%  Similarity=0.110  Sum_probs=81.1

Q ss_pred             CCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCC-CeEE---ee-----------ccccceEEEEEccCCCEEEEeC-C
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKP-DKYQ---LH-----------LHESCVLSLRFAACGKWFVSTG-K   79 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~-~~~~---~~-----------~~~~~v~~~~~~~~~~~~~~~~-~   79 (131)
                      .......++++|++++|+++.. ++.+.++++... .+..   ..           .....+.++.++|+|+++++.. .
T Consensus        85 ~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG  164 (345)
T PF10282_consen   85 GGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG  164 (345)
T ss_dssp             SSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred             CCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence            4456678999999999988864 788999999763 3211   11           1235678999999999887653 3


Q ss_pred             CCeEEEeeCCCCc--eE----EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGA--SI----FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~--~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~  130 (131)
                      ...|.+|++....  ..    ...........+.|+|++++++...+ ++.|.++++.
T Consensus       165 ~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~  222 (345)
T PF10282_consen  165 ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD  222 (345)
T ss_dssp             TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred             CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence            4578899887654  32    34467788999999999998876654 7788888764

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.88  E-value=9.8e-07  Score=62.67  Aligned_cols=109  Identities=9%  Similarity=-0.013  Sum_probs=76.6

Q ss_pred             eEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec---------------cccceEEEEEccCCCEEE-EeCCCCeE
Q psy15612         21 IFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL---------------HESCVLSLRFAACGKWFV-STGKDNLL   83 (131)
Q Consensus        21 v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~~~-~~~~~~~i   83 (131)
                      ...++++| ++..+++...++.|.+|+..++....+.+               .-..+..++++|++..++ +-+.++.|
T Consensus       685 P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~I  764 (1057)
T PLN02919        685 PWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSI  764 (1057)
T ss_pred             CeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeE
Confidence            45789999 45566666778889999987766433221               112456799999998554 55667899


Q ss_pred             EEeeCCCCceEEec-------------C---------CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         84 NAWRTPYGASIFQS-------------K---------ESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        84 ~~w~~~~~~~~~~~-------------~---------~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++||+.++......             +         .-.....++++++|+.+++-..++.|++||.
T Consensus       765 rv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~  832 (1057)
T PLN02919        765 RALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDP  832 (1057)
T ss_pred             EEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEEC
Confidence            99999876533110             0         0123568899999998888888999999986

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.88  E-value=3.6e-07  Score=58.61  Aligned_cols=127  Identities=15%  Similarity=0.230  Sum_probs=85.9

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE--eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG--MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      +|++++...........++|...+|.|.++.+++.  -....+.++|++......+.  +..-..+.|+|.+++++.++.
T Consensus       258 yl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~~~P--e~~rNT~~fsp~~r~il~agF  335 (561)
T COG5354         258 YLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNLRFYFP--EQKRNTIFFSPHERYILFAGF  335 (561)
T ss_pred             EEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccceEEecC--CcccccccccCcccEEEEecC
Confidence            45555522222222567899999999998876554  46777889999887443333  233346779999999999877


Q ss_pred             C---CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec------CCCcEEEEEee
Q psy15612         80 D---NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS------GDKKATVYEVI  130 (131)
Q Consensus        80 ~---~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~vw~~~  130 (131)
                      +   +.+-+||......+...-......-+.|+|+++++.+..      .|..+++||+.
T Consensus       336 ~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~  395 (561)
T COG5354         336 DNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVY  395 (561)
T ss_pred             CccccceEEeccCCceEEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEec
Confidence            6   458899987544433222334445678999999886542      36789999973

>KOG1240|consensus

Probab=98.88  E-value=8.5e-08  Score=66.97  Aligned_cols=130  Identities=15%  Similarity=0.220  Sum_probs=88.5

Q ss_pred             CEEEeCCCCceeeeec---CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE--eeccccceEEEEEccC---CC
Q psy15612          1 MYLQSVSPGRQLQQHD---FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ--LHLHESCVLSLRFAAC---GK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~--~~~~~~~v~~~~~~~~---~~   72 (131)
                      |..||+++......++   ..+.|.+++.+|.+++++.|...|.+.+||++-+....  ...+...+..+..+|-   .+
T Consensus      1175 iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S 1254 (1431)
T KOG1240|consen 1175 IVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQES 1254 (1431)
T ss_pred             eEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCc
Confidence            4578888776665553   33679999999999999999999999999998766422  2334466777777663   34


Q ss_pred             EEEEeC--CCCeEEEeeCCCCceE--EecC-----------C-----CCC--eEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         73 WFVSTG--KDNLLNAWRTPYGASI--FQSK-----------E-----SSS--VLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~--~~~~i~~w~~~~~~~~--~~~~-----------~-----~~~--v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..++++  ..+.+.+|++.+|.+.  ....           .     +..  ....++...+..+.+|+.|.+|+.||..
T Consensus      1255 ~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1255 VSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPT 1334 (1431)
T ss_pred             eEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCC
Confidence            555544  4678999999988665  1111           0     111  1122233345677888999999999975

>KOG4714|consensus

Probab=98.87  E-value=3.5e-08  Score=58.34  Aligned_cols=71  Identities=15%  Similarity=0.274  Sum_probs=59.0

Q ss_pred             CCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEcc-CCCEEEEeCCCCeEEEeeCC
Q psy15612         19 SQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAA-CGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        19 ~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~   89 (131)
                      ..|.+++-+|..+ .+++|+.+|.+.+||.+....  ..+..|+.++..+-|+| ++..+++++.||.+..||..
T Consensus       180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas  254 (319)
T KOG4714|consen  180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAS  254 (319)
T ss_pred             ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCC
Confidence            3488888888654 567788999999999987642  34578999999999999 57789999999999999976

>KOG1409|consensus

Probab=98.86  E-value=8.3e-08  Score=58.76  Aligned_cols=78  Identities=12%  Similarity=0.158  Sum_probs=67.2

Q ss_pred             EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         53 YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        53 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .++.+|...+.+++|.|....+.++..|..+.+||+...+..  ...+|...|..+..-+.-+.+.+++.||.|.+||..
T Consensus       191 ~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  191 TTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             EEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence            456678999999999999999999999999999999755544  667788899888887778889999999999999864

>KOG2315|consensus

Probab=98.84  E-value=7.3e-08  Score=62.09  Aligned_cols=103  Identities=13%  Similarity=0.244  Sum_probs=69.1

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |+|++ ++++..+ .+++=+++-|+|.|++++.++.   -|.+.+||..+.++ ..+..  ....-+.|+|||.+|+++.
T Consensus       298 ifnlr-~~~v~df-~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a--~~tt~~eW~PdGe~flTAT  373 (566)
T KOG2315|consen  298 IFNLR-GKPVFDF-PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA--ANTTVFEWSPDGEYFLTAT  373 (566)
T ss_pred             EEcCC-CCEeEeC-CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc--CCceEEEEcCCCcEEEEEe
Confidence            44444 4444333 3455678999999999887654   46799999988654 22222  2345688999999999875


Q ss_pred             C------CCeEEEeeCCCCceEEecCCCCCeEEEEECC
Q psy15612         79 K------DNLLNAWRTPYGASIFQSKESSSVLSCDISA  110 (131)
Q Consensus        79 ~------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~  110 (131)
                      .      |+.++||+.. |+.+......+....+.|-|
T Consensus       374 TaPRlrvdNg~Kiwhyt-G~~l~~~~f~sEL~qv~W~P  410 (566)
T KOG2315|consen  374 TAPRLRVDNGIKIWHYT-GSLLHEKMFKSELLQVEWRP  410 (566)
T ss_pred             ccccEEecCCeEEEEec-CceeehhhhhHhHhheeeee
Confidence            5      6789999985 66663333333566666665

>KOG0309|consensus

Probab=98.79  E-value=2e-08  Score=66.97  Aligned_cols=114  Identities=18%  Similarity=0.205  Sum_probs=90.0

Q ss_pred             cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612         16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      +|...+..+.|+|+.. .+++++.|..+..||+++...  .........-..++|+-....++..+..+.+.+||.+.|.
T Consensus       112 ghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs  191 (1081)
T KOG0309|consen  112 GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGS  191 (1081)
T ss_pred             cCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCC
Confidence            8889999999999755 678889999999999998774  3333445566789999866667777778889999999776


Q ss_pred             eE--EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612         93 SI--FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        93 ~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~  129 (131)
                      ..  ..++|-..+..++|..- ...+.+.+.|++++.||.
T Consensus       192 ~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y  231 (1081)
T KOG0309|consen  192 TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDY  231 (1081)
T ss_pred             cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecc
Confidence            54  66678888888888753 345677888999999984

>KOG1275|consensus

Probab=98.78  E-value=1.2e-07  Score=64.52  Aligned_cols=125  Identities=14%  Similarity=0.143  Sum_probs=90.7

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCCeEEeeccccceEEEEEccC-
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGME---------NSNVEVLHALKPDKYQLHLHESCVLSLRFAAC-   70 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~-   70 (131)
                      -+-|.++.+.++.+ .|.+.+..+..  .|+.|++++.         |..|++||++.-+...-.........++|.|. 
T Consensus       200 ~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl  277 (1118)
T KOG1275|consen  200 FLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSL  277 (1118)
T ss_pred             EeecCCcCceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccc
Confidence            35567777888888 78998887765  6888888765         55688999987664221122223356788886 


Q ss_pred             CCEEEEeCCCCeEEEeeC---CCCce-E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         71 GKWFVSTGKDNLLNAWRT---PYGAS-I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~---~~~~~-~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ...+++++..|...+.|.   .+... . .....++.+..+++++++..++.+..+|.|.+|-
T Consensus       278 ~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  278 TTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             cceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            446778888888888883   33321 1 4445566699999999999999999999999995

>KOG3621|consensus

Probab=98.78  E-value=1.8e-07  Score=61.91  Aligned_cols=114  Identities=11%  Similarity=0.101  Sum_probs=90.1

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec--cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL--HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +...+.--+++..+++++.|+..|.+.+|+-.++..+....  ..+.+.....+++..+++.++..+.|.++.+..+...
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~  111 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR  111 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence            44567777778889999999999999999998877644433  5566677778998999999999999999987754332


Q ss_pred             -------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 -------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 -------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                             ....|+..|++++|++++..+++|...|+|..-.+.
T Consensus       112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~  154 (726)
T KOG3621|consen  112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELD  154 (726)
T ss_pred             cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEec
Confidence                   223468899999999999999999999998876553

>KOG2695|consensus

Probab=98.75  E-value=1.7e-08  Score=61.74  Aligned_cols=96  Identities=14%  Similarity=0.103  Sum_probs=77.3

Q ss_pred             EEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC----c-eEEecCCCCCeEEEEEC
Q psy15612         35 VGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG----A-SIFQSKESSSVLSCDIS  109 (131)
Q Consensus        35 ~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~----~-~~~~~~~~~~v~~~~~~  109 (131)
                      +.+.+..+.+-+++++....+. .++.|..+.|...++.+..|++.+.|..+|++.+    . +....-|++.|+++..-
T Consensus       229 s~G~sqqv~L~nvetg~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~L  307 (425)
T KOG2695|consen  229 SVGLSQQVLLTNVETGHQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQIL  307 (425)
T ss_pred             cccccceeEEEEeecccccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhh
Confidence            3445566888888887765555 6678899999988999999999999999999865    2 22566789999988876


Q ss_pred             C-CCCEEEEecCCCcEEEEEeeC
Q psy15612        110 A-DDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus       110 ~-~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      . ++++|++.+.+|+|++||+|.
T Consensus       308 q~s~q~LmaS~M~gkikLyD~R~  330 (425)
T KOG2695|consen  308 QFSQQKLMASDMTGKIKLYDLRA  330 (425)
T ss_pred             ccccceEeeccCcCceeEeeehh
Confidence            6 778888888999999999973

>KOG2066|consensus

Probab=98.74  E-value=1.1e-06  Score=59.28  Aligned_cols=98  Identities=19%  Similarity=0.196  Sum_probs=74.6

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccC-----CCEEEEeCCCCeEEEeeCC---CCceEEecCCC
Q psy15612         29 SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC-----GKWFVSTGKDNLLNAWRTP---YGASIFQSKES  100 (131)
Q Consensus        29 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~i~~w~~~---~~~~~~~~~~~  100 (131)
                      +|.++++|+.||++.+..+.+.+.........++.+++++|+     .+.+++|+..| +.++.-.   ...........
T Consensus        82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~e  160 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGE  160 (846)
T ss_pred             CCceEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCc
Confidence            599999999999999999887776444455678899999997     45688888887 6666422   22222455678


Q ss_pred             CCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612        101 SSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       101 ~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|.++.|  .|++++-++.+| ++|||..
T Consensus       161 G~I~~i~W--~g~lIAWand~G-v~vyd~~  187 (846)
T KOG2066|consen  161 GPIHSIKW--RGNLIAWANDDG-VKVYDTP  187 (846)
T ss_pred             cceEEEEe--cCcEEEEecCCC-cEEEecc
Confidence            99999999  588888887666 8999863

>KOG1354|consensus

Probab=98.73  E-value=4.3e-08  Score=60.08  Aligned_cols=113  Identities=13%  Similarity=0.167  Sum_probs=81.5

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEE---eecc-----ccceEEEEEccC-CCEEEEeCCCCeEEE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQ---LHLH-----ESCVLSLRFAAC-GKWFVSTGKDNLLNA   85 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~---~~~~-----~~~v~~~~~~~~-~~~~~~~~~~~~i~~   85 (131)
                      .|..-|.++.++.|+..++++. |-.|.+|+++-.. ...   +..+     ..-|.+..|+|. -+.++-++..|.|++
T Consensus       162 aHtyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrL  240 (433)
T KOG1354|consen  162 AHTYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRL  240 (433)
T ss_pred             cceeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEE
Confidence            4777799999999999988874 5679999986332 211   2222     345778899996 456777888999999


Q ss_pred             eeCCCCceE------Eec-----------CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         86 WRTPYGASI------FQS-----------KESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        86 w~~~~~~~~------~~~-----------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|++.....      +..           .--..|..+.|++.|+++++-.. -++++||+.
T Consensus       241 cDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~n  301 (433)
T KOG1354|consen  241 CDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLN  301 (433)
T ss_pred             eechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEecc
Confidence            999854332      111           11255788999999999987643 589999985

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.73  E-value=2.2e-06  Score=53.86  Aligned_cols=89  Identities=9%  Similarity=0.008  Sum_probs=64.7

Q ss_pred             CcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC----------CCeEEEeeCCCCceEEecCCC--------
Q psy15612         40 SNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK----------DNLLNAWRTPYGASIFQSKES--------  100 (131)
Q Consensus        40 ~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~i~~w~~~~~~~~~~~~~~--------  100 (131)
                      +.+.+.|..+.+. ..+..-. ....+ ++||++.++.+..          +..|.+||..+.+.......+        
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~-~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~  104 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGF-LPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG  104 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccC-CCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence            7899999998886 3343322 23344 9999998877644          778999999999988333322        


Q ss_pred             CCeEEEEECCCCCEEEEecC--CCcEEEEEee
Q psy15612        101 SSVLSCDISADDKYIVTGSG--DKKATVYEVI  130 (131)
Q Consensus       101 ~~v~~~~~~~~~~~l~~~~~--d~~i~vw~~~  130 (131)
                      .....++++|+|++++....  +..+.+.|+.
T Consensus       105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~  136 (352)
T TIGR02658       105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLE  136 (352)
T ss_pred             CccceEEECCCCCEEEEecCCCCCEEEEEECC
Confidence            23348899999999887653  6789888864

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.72  E-value=4.9e-06  Score=51.37  Aligned_cols=130  Identities=18%  Similarity=0.168  Sum_probs=87.2

Q ss_pred             CEEEeCCC--Cce--eeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCC--CCeEEe---eccccceEEEEEc
Q psy15612          1 MYLQSVSP--GRQ--LQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALK--PDKYQL---HLHESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~--~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~--~~~~~~---~~~~~~v~~~~~~   68 (131)
                      |+.|++.+  ++.  +......+.+.-++|+|+++.|.++..   .+.+..|.+..  +++..+   ........-++++
T Consensus        18 I~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd   97 (346)
T COG2706          18 IYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVD   97 (346)
T ss_pred             eEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEEC
Confidence            56777763  222  223366778899999999999988755   46677777654  554332   2223344789999


Q ss_pred             cCCCEEEEeCC-CCeEEEeeCCC-CceE---EecCCCCC----------eEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612         69 ACGKWFVSTGK-DNLLNAWRTPY-GASI---FQSKESSS----------VLSCDISADDKYIVTGSG-DKKATVYEVI  130 (131)
Q Consensus        69 ~~~~~~~~~~~-~~~i~~w~~~~-~~~~---~~~~~~~~----------v~~~~~~~~~~~l~~~~~-d~~i~vw~~~  130 (131)
                      ++|++++++.. .+.|.++-+++ |...   ....|.+.          +....+.|+++++++..- ..+|.+|++.
T Consensus        98 ~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~  175 (346)
T COG2706          98 EDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLD  175 (346)
T ss_pred             CCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcc
Confidence            99999888755 46788988864 5443   22233333          888899999999887653 3468888763

>KOG4640|consensus

Probab=98.71  E-value=2.7e-07  Score=60.55  Aligned_cols=94  Identities=13%  Similarity=0.115  Sum_probs=77.8

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceE-EEEEccCCCEEEEeCCCCeEEEeeCCCCceEE
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVL-SLRFAACGKWFVSTGKDNLLNAWRTPYGASIF   95 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~   95 (131)
                      ....+..+.|+|.-..+|.+..+|.+.+.-+...++-.++-+...+. +++|.|||+.++.|-.||+|++.|..++..+.
T Consensus        19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~   98 (665)
T KOG4640|consen   19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV   98 (665)
T ss_pred             cccceEEEEEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence            44568899999999999999999999998888666666665555666 99999999999999999999999999988773


Q ss_pred             --ecCCCCCeEEEEECC
Q psy15612         96 --QSKESSSVLSCDISA  110 (131)
Q Consensus        96 --~~~~~~~v~~~~~~~  110 (131)
                        .......|.++-|++
T Consensus        99 ~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   99 SFLFSVETDISKGIWDR  115 (665)
T ss_pred             ccccccccchheeeccc
Confidence              355667777777763

>KOG1354|consensus

Probab=98.66  E-value=3.1e-07  Score=56.44  Aligned_cols=128  Identities=13%  Similarity=0.294  Sum_probs=86.0

Q ss_pred             CEEEeCCC-Cceeeee---c-----CCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-------EE---------
Q psy15612          1 MYLQSVSP-GRQLQQH---D-----FSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-------YQ---------   54 (131)
Q Consensus         1 i~iwd~~~-~~~~~~~---~-----~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-------~~---------   54 (131)
                      |.+|+++- .+.....   .     ...-|.+..|+|. ...++..+..|+|++.|++...+       ..         
T Consensus       187 INLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rs  266 (433)
T KOG1354|consen  187 INLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRS  266 (433)
T ss_pred             eeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchh
Confidence            45787762 3333322   2     2245889999996 55677778899999999984321       00         


Q ss_pred             -eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC-CCceE-EecCC------------CCCe---EEEEECCCCCEEE
Q psy15612         55 -LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP-YGASI-FQSKE------------SSSV---LSCDISADDKYIV  116 (131)
Q Consensus        55 -~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~-~~~~~-~~~~~------------~~~v---~~~~~~~~~~~l~  116 (131)
                       +..--+.|.+++|+++|+++++-.. .++++||+. ..+++ ...-|            ...|   ..++|+.++.+++
T Consensus       267 ffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~  345 (433)
T KOG1354|consen  267 FFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVM  345 (433)
T ss_pred             hHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEe
Confidence             1122356889999999999987653 578999984 33333 21111            2222   5688999999999


Q ss_pred             EecCCCcEEEEEe
Q psy15612        117 TGSGDKKATVYEV  129 (131)
Q Consensus       117 ~~~~d~~i~vw~~  129 (131)
                      +|+....++++++
T Consensus       346 TGsy~n~frvf~~  358 (433)
T KOG1354|consen  346 TGSYNNVFRVFNL  358 (433)
T ss_pred             cccccceEEEecC
Confidence            9999999999884

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.64  E-value=1.5e-05  Score=47.92  Aligned_cols=127  Identities=10%  Similarity=0.049  Sum_probs=83.1

Q ss_pred             EEEeCCCCceeeeec------CCCCeEEEEECCCCCEEEEEeCC--------CcEEEEeCCCCCeEEeeccccceEEEEE
Q psy15612          2 YLQSVSPGRQLQQHD------FSSQIFSLGYCPSGEWLAVGMEN--------SNVEVLHALKPDKYQLHLHESCVLSLRF   67 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~--------~~v~~~~~~~~~~~~~~~~~~~v~~~~~   67 (131)
                      .++|..+++......      .....+.+++.|+|++.++....        +.+..++.. ++.......-.....++|
T Consensus        63 ~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~  141 (246)
T PF08450_consen   63 AVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAF  141 (246)
T ss_dssp             EEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEE
T ss_pred             EEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEE
Confidence            456877776554432      23468899999999977765443        446777777 555444444556789999


Q ss_pred             ccCCCEEE-EeCCCCeEEEeeCCCCce--E----EecCC--CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         68 AACGKWFV-STGKDNLLNAWRTPYGAS--I----FQSKE--SSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        68 ~~~~~~~~-~~~~~~~i~~w~~~~~~~--~----~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +|+++.++ +-+..+.|..+++.....  .    .....  .+..-.+++..+|++.++....+.|.++|.
T Consensus       142 s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p  212 (246)
T PF08450_consen  142 SPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDP  212 (246)
T ss_dssp             ETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEET
T ss_pred             CCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECC
Confidence            99999776 557788898888853222  1    21112  234788999999998777666778888764

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.61  E-value=6.3e-06  Score=57.97  Aligned_cols=128  Identities=13%  Similarity=0.134  Sum_probs=84.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEe----eccccceEEEEEccCCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQL----HLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~   72 (131)
                      +|+|+-+ |+...+- ...+--.+++|.|.|+++++.-.   ...|.+|+-.+-+...+    ......+..+.|++|+.
T Consensus       239 iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~  317 (928)
T PF04762_consen  239 IRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSE  317 (928)
T ss_pred             EEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCC
Confidence            5788855 6544433 33344568999999999998754   34566777655443222    23456789999999999


Q ss_pred             EEEEeCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612         73 WFVSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~  130 (131)
                      .++....+. |.+|...+...-    ........+..+.|+|.. ..+.....++.+..+++.
T Consensus       318 iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~  379 (928)
T PF04762_consen  318 ILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFA  379 (928)
T ss_pred             EEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEE
Confidence            998876554 999998877653    222234445559999853 446666666777666654

>KOG1334|consensus

Probab=98.59  E-value=3.1e-07  Score=58.65  Aligned_cols=111  Identities=15%  Similarity=0.215  Sum_probs=85.7

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-------------eEE-eecccc--ceEEEEEc-cCCCEEEEeCCCC
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-------------KYQ-LHLHES--CVLSLRFA-ACGKWFVSTGKDN   81 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-------------~~~-~~~~~~--~v~~~~~~-~~~~~~~~~~~~~   81 (131)
                      -.|.+++++.++.-|++.-.|-.++++....+.             ... .++|..  .|..+-|- |...++++|+.-|
T Consensus       337 v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCG  416 (559)
T KOG1334|consen  337 VNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCG  416 (559)
T ss_pred             ccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccc
Confidence            458999999877766666677788988543221             111 345543  46667664 6677899999889


Q ss_pred             eEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         82 LLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        82 ~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .|.+|+-.+++.+ +..+...-|.|+.-+|--..|++.+-|..|+||-.
T Consensus       417 hIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP  465 (559)
T KOG1334|consen  417 HIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTP  465 (559)
T ss_pred             eEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecC
Confidence            9999999999888 66666679999999999999999999999999964

>KOG4190|consensus

Probab=98.59  E-value=9.2e-08  Score=62.32  Aligned_cols=77  Identities=12%  Similarity=0.167  Sum_probs=60.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-------e-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-------K-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-------~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      +|+..|..++--.+.+.+++++.|.+|++|.++..-       + .+.+.|+.+|.++.|-.+-++++++  |+.+.+||
T Consensus       733 GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWD  810 (1034)
T KOG4190|consen  733 GHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWD  810 (1034)
T ss_pred             CcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceeec
Confidence            788888888777788889999999999999986321       2 3457899999999999888877654  77899999


Q ss_pred             CCCCceE
Q psy15612         88 TPYGASI   94 (131)
Q Consensus        88 ~~~~~~~   94 (131)
                      .--|+.+
T Consensus       811 PFigr~L  817 (1034)
T KOG4190|consen  811 PFIGRLL  817 (1034)
T ss_pred             ccccchh
Confidence            6555444

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.58  E-value=1.3e-05  Score=55.09  Aligned_cols=126  Identities=10%  Similarity=0.186  Sum_probs=83.3

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCC-------CCEEEEEeCCCcEEEEeCCCCC--eEE--e--eccccceEEEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPS-------GEWLAVGMENSNVEVLHALKPD--KYQ--L--HLHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~-------~~~l~~~~~~~~v~~~~~~~~~--~~~--~--~~~~~~v~~~~~   67 (131)
                      |+-.|++.|+.+........+.-..+.|+       ...-+.|-.+..+..||.+-..  +..  .  -.......|++-
T Consensus       506 ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aT  585 (794)
T PF08553_consen  506 LYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFAT  585 (794)
T ss_pred             eEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEe
Confidence            34568889998887743333323444443       2234566667779999987532  211  1  123345667777


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.+| +|+.|+.+|.|++||-. |+.-  .+.+-+.+|.++..+.||++++..+. ..+.+++.
T Consensus       586 t~~G-~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  586 TEDG-YIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLIDT  646 (794)
T ss_pred             cCCc-eEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence            6666 57889999999999943 4333  44566899999999999999988775 45666654

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.57  E-value=3.4e-06  Score=54.45  Aligned_cols=119  Identities=17%  Similarity=0.102  Sum_probs=79.7

Q ss_pred             Cceeeee-cCCCCeEEEEECCCCCEEEEE---eCC-CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCCCe
Q psy15612          9 GRQLQQH-DFSSQIFSLGYCPSGEWLAVG---MEN-SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKDNL   82 (131)
Q Consensus         9 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~---~~~-~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~   82 (131)
                      +.....+ .....+...+|+|+++.++..   ... ..+.++++.+++...+....+.-..-+|+|||+.++.+ .+++.
T Consensus       182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~  261 (425)
T COG0823         182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGS  261 (425)
T ss_pred             CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCC
Confidence            3334444 344567889999999987654   222 45888999888765555555566678899999987654 55555


Q ss_pred             --EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEE
Q psy15612         83 --LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVY  127 (131)
Q Consensus        83 --i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw  127 (131)
                        |++.|+.++....+....+.-..-.|+|+|++++..+. .|.-.||
T Consensus       262 ~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~  309 (425)
T COG0823         262 PDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIY  309 (425)
T ss_pred             ccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceE
Confidence              66668776664454444455558889999999876543 5554444

>KOG1064|consensus

Probab=98.54  E-value=2.7e-07  Score=66.98  Aligned_cols=104  Identities=16%  Similarity=0.252  Sum_probs=74.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEE---eCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVG---MENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~---~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~   90 (131)
                      .|+.....+.|-.  ..++++   ..++.+.+||.....  ......|.+.+.++++.|..+.+++|+++|.+.+||++.
T Consensus      2290 chnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rq 2367 (2439)
T KOG1064|consen 2290 CHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQ 2367 (2439)
T ss_pred             cCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHH
Confidence            3444455555533  333443   346789999975433  233378999999999999999999999999999999987


Q ss_pred             CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         91 GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .+.......        +. ...++++++..|.++||++.
T Consensus      2368 rql~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~s 2398 (2439)
T KOG1064|consen 2368 RQLRHTFQA--------LD-TREYFVTGSSEGNIKIWRLS 2398 (2439)
T ss_pred             HHHHHHhhh--------hh-hhheeeccCcccceEEEEcc
Confidence            665522211        33 45688999999999999873

>KOG1912|consensus

Probab=98.53  E-value=6.7e-06  Score=55.79  Aligned_cols=127  Identities=10%  Similarity=0.077  Sum_probs=90.7

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCC------------CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEE
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPS------------GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRF   67 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~------------~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~   67 (131)
                      .+-|..+-+.++.+ .|+..|..+.|.|.            .-.|++++..|.|.+||...... ..+..+..++.++.|
T Consensus        38 ~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W  117 (1062)
T KOG1912|consen   38 SVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCW  117 (1062)
T ss_pred             EEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheee
Confidence            45577777777777 67888999999763            12467788899999999987664 556667778889988


Q ss_pred             cc---CC-CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEE
Q psy15612         68 AA---CG-KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        68 ~~---~~-~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~  128 (131)
                      -+   +. ..++.-.....+.+|+..+|+.. ..........|+.+.| +.+.+...+..|.+.+.+
T Consensus       118 ~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~  184 (1062)
T KOG1912|consen  118 VPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCK  184 (1062)
T ss_pred             eeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEe
Confidence            76   33 34556677788999999999988 3334455566788887 555555555556665544

>KOG2314|consensus

Probab=98.53  E-value=3.5e-06  Score=54.97  Aligned_cols=105  Identities=21%  Similarity=0.295  Sum_probs=76.0

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC-----------CCeEEEeeCC
Q psy15612         21 IFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK-----------DNLLNAWRTP   89 (131)
Q Consensus        21 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-----------~~~i~~w~~~   89 (131)
                      -+-+.|||.|.+|++-..-| |.+|--.+........|+ .|.-+.|||..++|++-+.           ...+.|||+.
T Consensus       213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~  290 (698)
T KOG2314|consen  213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA  290 (698)
T ss_pred             eeeEEecCCceEEEEEeccc-eeeecCccHHHHHhccCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence            46789999999999987766 888876655432323343 4788999999999987543           2468999999


Q ss_pred             CCceE--Eec--CCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         90 YGASI--FQS--KESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        90 ~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +|...  +..  .....-.-..||.|+++++.-..+ .|.|++
T Consensus       291 tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyE  332 (698)
T KOG2314|consen  291 TGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYE  332 (698)
T ss_pred             ccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEe
Confidence            99887  222  233334567899999999876654 577775

>KOG4714|consensus

Probab=98.50  E-value=2.8e-07  Score=54.66  Aligned_cols=68  Identities=12%  Similarity=0.159  Sum_probs=57.8

Q ss_pred             eEEEEEccCCC-EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEe
Q psy15612         62 VLSLRFAACGK-WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        62 v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.+++-+|..+ .+++|+.++.+-+||.++..-.  .++.|...+..+.|+| ++..|+++++||.+-.||.
T Consensus       182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wda  253 (319)
T KOG4714|consen  182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA  253 (319)
T ss_pred             chhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence            78888888655 5667888999999999988655  6778999999999999 5678999999999999985

>KOG2314|consensus

Probab=98.49  E-value=2.8e-06  Score=55.43  Aligned_cols=102  Identities=11%  Similarity=0.086  Sum_probs=71.7

Q ss_pred             ecCCCCeEEEEECCCCCEEEEEeC-----------CCcEEEEeCCCCCe-EEeec---cccceEEEEEccCCCEEEEeCC
Q psy15612         15 HDFSSQIFSLGYCPSGEWLAVGME-----------NSNVEVLHALKPDK-YQLHL---HESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus        15 ~~~~~~v~~~~~~~~~~~l~~~~~-----------~~~v~~~~~~~~~~-~~~~~---~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      +.|++ |.-+.|||..++|++-+.           ...+.|||++++.. +.+..   ....-.-+.||-|+++++.-..
T Consensus       247 F~Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~  325 (698)
T KOG2314|consen  247 FYHPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG  325 (698)
T ss_pred             ccCCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc
Confidence            33443 778999999999998543           24689999999986 33333   2223346899999999987654


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEe
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                       +.|.+++..+-..+ ...-.-+.|....|+|.++.|+--
T Consensus       326 -~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYw  364 (698)
T KOG2314|consen  326 -NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYW  364 (698)
T ss_pred             -ceEEEEecCceeeecccccCCccccCcccCCCcceEEEE
Confidence             67889987764444 222345778889999998887643

>KOG3617|consensus

Probab=98.49  E-value=1e-06  Score=60.18  Aligned_cols=112  Identities=11%  Similarity=0.029  Sum_probs=84.4

Q ss_pred             CCCCeEEEEECCCCCEEEEEeC----CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGME----NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~----~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      ..+...-..|+|...+++.++.    .|.|.||-- +++...-...+-.+.+++|+|..-.++.+-.-+.+.+|...+.+
T Consensus        14 sdavsti~SWHPsePlfAVA~fS~er~GSVtIfad-tGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e   92 (1416)
T KOG3617|consen   14 SDAVSTISSWHPSEPLFAVASFSPERGGSVTIFAD-TGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE   92 (1416)
T ss_pred             ccccccccccCCCCceeEEEEecCCCCceEEEEec-CCCCCcccccceehhhhccChHHHHHhhccccceeEEEecCCce
Confidence            3344556789999999887653    566777643 23322212223345679999987778888888899999988766


Q ss_pred             eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         93 SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        93 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .. ....|+..+..+.|||+|+.++++..-|.+.+|..
T Consensus        93 ~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~  130 (1416)
T KOG3617|consen   93 THTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRY  130 (1416)
T ss_pred             eeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEe
Confidence            65 67789999999999999999999999999999975

>KOG2041|consensus

Probab=98.46  E-value=7.5e-07  Score=59.82  Aligned_cols=113  Identities=12%  Similarity=0.113  Sum_probs=87.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEe--eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQL--HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      +|++.|.-+.|+.+.+.|.+...+|.+.+|-+-.+.- ..+  ...++.|.++.|+.||..++..-.||.+.+=.+. |.
T Consensus        69 GH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd-GN  147 (1189)
T KOG2041|consen   69 GHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD-GN  147 (1189)
T ss_pred             cCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec-cc
Confidence            7999999999999999999999999999999987763 222  3356789999999999999999889887665543 54


Q ss_pred             eEEec-CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         93 SIFQS-KESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        93 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+.-+ -.......+.|++|.+.+..+-.+|...++|-
T Consensus       148 RIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydn  185 (1189)
T KOG2041|consen  148 RIWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDN  185 (1189)
T ss_pred             eecchhcchheccceeecccHHHHHhhhcCCcEEEecc
Confidence            44211 12334457889999888888777888888874

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.45  E-value=3.4e-06  Score=53.31  Aligned_cols=102  Identities=14%  Similarity=0.148  Sum_probs=67.5

Q ss_pred             CCCCCEEEEEe---------CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec
Q psy15612         27 CPSGEWLAVGM---------ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS   97 (131)
Q Consensus        27 ~~~~~~l~~~~---------~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~   97 (131)
                      |||+++++...         ..+...++|+.+++...+......+....|||+|+.++... ++.|.+.+..+++...+.
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT   79 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLT   79 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEec
Confidence            57888776632         23568899999988766655567788999999999988775 678999998777554222


Q ss_pred             CC------------------CCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612         98 KE------------------SSSVLSCDISADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus        98 ~~------------------~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~  129 (131)
                      ..                  -+.-..+-|||++++|+.... ++.++.+.+
T Consensus        80 ~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~  130 (353)
T PF00930_consen   80 TDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPL  130 (353)
T ss_dssp             S--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEE
T ss_pred             cccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEe
Confidence            11                  123356889999999986654 455555544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.44  E-value=7.8e-06  Score=48.67  Aligned_cols=128  Identities=15%  Similarity=0.097  Sum_probs=73.6

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEE--ECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLG--YCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |..+|.++|+.+.............  ..+++..+++++.++.+..+|..+++..-.......+...... ++..++.++
T Consensus         5 l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~v~v~~   83 (238)
T PF13360_consen    5 LSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVV-DGGRVYVGT   83 (238)
T ss_dssp             EEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEE-ETTEEEEEE
T ss_pred             EEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeee-ccccccccc
Confidence            4678999999998874422121111  2335667777789999999999888752211111111111122 345556666


Q ss_pred             CCCeEEEeeCCCCceEEe--cCC--C-CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASIFQ--SKE--S-SSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~--~~~--~-~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .++.+..+|..+|+.+..  ...  . ...........+..++.+..++.+..+|+
T Consensus        84 ~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~  139 (238)
T PF13360_consen   84 SDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDP  139 (238)
T ss_dssp             TTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEET
T ss_pred             ceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEec
Confidence            777999999999998832  221  1 11122222223666666666677777664

...

>KOG1645|consensus

Probab=98.44  E-value=2.5e-06  Score=53.56  Aligned_cols=91  Identities=9%  Similarity=0.001  Sum_probs=68.4

Q ss_pred             EEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC-EEEEeC
Q psy15612          3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK-WFVSTG   78 (131)
Q Consensus         3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~~~~~~   78 (131)
                      +.+..+.+....+ .+...|..++|+|..+ ++..++.+..+.+.|+++..+ .....+ ..+.+++|.-|.. +++.|.
T Consensus       177 ~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl  255 (463)
T KOG1645|consen  177 KLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGL  255 (463)
T ss_pred             EeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEec
Confidence            3333333443333 5667799999999877 778889999999999998875 344444 7889999988654 677888


Q ss_pred             CCCeEEEeeCCCCceE
Q psy15612         79 KDNLLNAWRTPYGASI   94 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~   94 (131)
                      .+|.|.+||++..+..
T Consensus       256 ~nG~VlvyD~R~~~~~  271 (463)
T KOG1645|consen  256 QNGMVLVYDMRQPEGP  271 (463)
T ss_pred             cCceEEEEEccCCCch
Confidence            8999999999876654

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.41  E-value=7.6e-05  Score=44.91  Aligned_cols=106  Identities=12%  Similarity=0.083  Sum_probs=68.5

Q ss_pred             eEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCCeEEeec------cccceEEEEEccCCCEEEEeCCC--------CeEEE
Q psy15612         21 IFSLGYC-PSGEWLAVGMENSNVEVLHALKPDKYQLHL------HESCVLSLRFAACGKWFVSTGKD--------NLLNA   85 (131)
Q Consensus        21 v~~~~~~-~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~--------~~i~~   85 (131)
                      ...+.+. +++. ++.+...+ +.++|..+++...+..      ....+.++++.|+|+..++....        +.+..
T Consensus        42 ~~G~~~~~~~g~-l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~  119 (246)
T PF08450_consen   42 PNGMAFDRPDGR-LYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYR  119 (246)
T ss_dssp             EEEEEEECTTSE-EEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEE
T ss_pred             CceEEEEccCCE-EEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEE
Confidence            6677777 5654 44545544 5666988887533321      34568899999999977665432        45777


Q ss_pred             eeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         86 WRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        86 w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      ++.. ++.......-.....++|+|+++.|+ +-+..+.|..+++
T Consensus       120 ~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~  163 (246)
T PF08450_consen  120 IDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDL  163 (246)
T ss_dssp             EETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred             ECCC-CeEEEEecCcccccceEECCcchheeecccccceeEEEec
Confidence            7776 55543333456678999999998775 5556677777776

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.40  E-value=3.6e-05  Score=54.36  Aligned_cols=68  Identities=12%  Similarity=0.163  Sum_probs=56.5

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEE----eCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVL----HALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW   86 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w   86 (131)
                      +.|.++.+-++...++.+..+|.|.+.    +........+..-...|.+++||||+..++..+.++++.+-
T Consensus        76 ~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~m  147 (928)
T PF04762_consen   76 DKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLM  147 (928)
T ss_pred             CcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEE
Confidence            578999999999999999999999999    66666666666677899999999999999888777765544

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.35  E-value=0.00014  Score=44.89  Aligned_cols=117  Identities=15%  Similarity=0.057  Sum_probs=82.4

Q ss_pred             EEEeCCCCceeeee-cCCCCe--EEEEECCCCCEEEEEeC-----CCcEEEEeCC-CCC-eEEeeccccceEEEEEccCC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQI--FSLGYCPSGEWLAVGME-----NSNVEVLHAL-KPD-KYQLHLHESCVLSLRFAACG   71 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v--~~~~~~~~~~~l~~~~~-----~~~v~~~~~~-~~~-~~~~~~~~~~v~~~~~~~~~   71 (131)
                      .+||.++++....+ ...++-  -.-.|+|||++|++...     .|.|-+||.. +.+ +.++..+.-....+.+.|||
T Consensus        31 ~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG  110 (305)
T PF07433_consen   31 LVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDG  110 (305)
T ss_pred             EEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCC
Confidence            57899999888776 323322  25678999999988644     4679999998 333 35566677778899999999


Q ss_pred             CEEEEeCC------------------CCeEEEeeCCCCceE-E--e--cCCCCCeEEEEECCCCCEEEEe
Q psy15612         72 KWFVSTGK------------------DNLLNAWRTPYGASI-F--Q--SKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        72 ~~~~~~~~------------------~~~i~~w~~~~~~~~-~--~--~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                      +.|+.+..                  +..+...|..+|+.+ .  +  ..|.-.+..+++.++|..++..
T Consensus       111 ~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~  180 (305)
T PF07433_consen  111 ETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAM  180 (305)
T ss_pred             CEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEE
Confidence            87776522                  123666777888877 2  2  2256789999999998765543

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.31  E-value=9.1e-05  Score=48.11  Aligned_cols=126  Identities=13%  Similarity=0.109  Sum_probs=78.0

Q ss_pred             EEEeCCCCceeeeec-CCCCeEEEEECCCCCEEEEE-----------eCCCcEEEEeCCCCCeEEeeccccceEEEEEcc
Q psy15612          2 YLQSVSPGRQLQQHD-FSSQIFSLGYCPSGEWLAVG-----------MENSNVEVLHALKPDKYQLHLHESCVLSLRFAA   69 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-----------~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~   69 (131)
                      ++|.+..+..+.+.. .+..=..+.|++.|..+++-           ....++.++++....+.....-.++|.+++|+|
T Consensus       205 ~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p  284 (561)
T COG5354         205 RILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEP  284 (561)
T ss_pred             EEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecc
Confidence            455555444443321 12223468888888876542           113568888887655544335578999999999


Q ss_pred             CCCEEEEe--CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612         70 CGKWFVST--GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV  129 (131)
Q Consensus        70 ~~~~~~~~--~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~  129 (131)
                      +++.+++.  -..-.+.++|++.. ..+. ...+.=..+.|+|.+++++.++-|   |.+-+||.
T Consensus       285 ~S~~F~vi~g~~pa~~s~~~lr~N-l~~~-~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~  347 (561)
T COG5354         285 LSSRFAVISGYMPASVSVFDLRGN-LRFY-FPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDP  347 (561)
T ss_pred             cCCceeEEecccccceeecccccc-eEEe-cCCcccccccccCcccEEEEecCCccccceEEecc
Confidence            98877654  45667888888744 3322 233333456788888887765543   45666664

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.30  E-value=1.7e-06  Score=52.88  Aligned_cols=114  Identities=15%  Similarity=0.165  Sum_probs=79.4

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeecc-----ccceEEEEEccCCC-EEEEeCCCCeEEE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLH-----ESCVLSLRFAACGK-WFVSTGKDNLLNA   85 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~-----~~~v~~~~~~~~~~-~~~~~~~~~~i~~   85 (131)
                      .|..-+.++.++.|...++++ .+-.+.+|++.-..    +.-+..|     ...|.+..|+|... .+..++..|.|++
T Consensus       170 aH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl  248 (460)
T COG5170         170 AHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKL  248 (460)
T ss_pred             cceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEe
Confidence            366668899999888888876 45679999886433    1222233     34577889999644 4556677899999


Q ss_pred             eeCCCCceE------E---e--------cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         86 WRTPYGASI------F---Q--------SKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        86 w~~~~~~~~------~---~--------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      -|++.....      +   .        .+-...|..+.|+++|+++++-+. -++++||++.
T Consensus       249 ~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm  310 (460)
T COG5170         249 NDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNM  310 (460)
T ss_pred             hhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEeccc
Confidence            999843322      0   0        112466888999999999987654 4799999863

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.29  E-value=4.5e-05  Score=48.67  Aligned_cols=119  Identities=13%  Similarity=0.064  Sum_probs=71.3

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eecccc-ceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHLHES-CVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~-~v~~~~~~~~~~~~~~~~~   79 (131)
                      +.+|.++++.+....... ...+.  ..+..++.++.++.+..+|..+++..- ...... .......  .+..++.++.
T Consensus       254 ~a~d~~tG~~~W~~~~~~-~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~  328 (377)
T TIGR03300       254 AALDLRSGRVLWKRDASS-YQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDF  328 (377)
T ss_pred             EEEECCCCcEEEeeccCC-ccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeC
Confidence            567777777665553221 11111  246677778889999999998877421 111111 1111111  3668888899


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCC-eEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSS-VLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      ++.+.++|..+|+.+ ....+... .....+.  +..|+.++.||.+..+
T Consensus       329 ~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~--~~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       329 EGYLHWLSREDGSFVARLKTDGSGIASPPVVV--GDGLLVQTRDGDLYAF  376 (377)
T ss_pred             CCEEEEEECCCCCEEEEEEcCCCccccCCEEE--CCEEEEEeCCceEEEe
Confidence            999999999999988 33223322 2223332  3447778889887654

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.29  E-value=9.3e-05  Score=49.72  Aligned_cols=89  Identities=12%  Similarity=0.113  Sum_probs=63.9

Q ss_pred             EEEeCCC-----CceeeeecCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCe------------EEeeccccceE
Q psy15612          2 YLQSVSP-----GRQLQQHDFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDK------------YQLHLHESCVL   63 (131)
Q Consensus         2 ~iwd~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~------------~~~~~~~~~v~   63 (131)
                      .+.|.++     .+.+..+......-.+.++|||+++++++. +.++.++|+.+.+.            .....-.....
T Consensus       299 ~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPL  378 (635)
T PRK02888        299 PVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPL  378 (635)
T ss_pred             EEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcc
Confidence            4667666     344555567777888999999998876644 78899999986441            11111234466


Q ss_pred             EEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612         64 SLRFAACGKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~i~~w~~~~   90 (131)
                      ..+|.++|+...+---|..+..|++.+
T Consensus       379 HTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        379 HTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             eEEECCCCCEEEeEeecceeEEEehHH
Confidence            788999998777777788999999875

>KOG0309|consensus

Probab=98.28  E-value=6.8e-06  Score=55.54  Aligned_cols=90  Identities=14%  Similarity=0.184  Sum_probs=63.8

Q ss_pred             EEEEeCCCCC---e-EEeeccccceEEEEEccCCC-EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCE
Q psy15612         42 VEVLHALKPD---K-YQLHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKY  114 (131)
Q Consensus        42 v~~~~~~~~~---~-~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~  114 (131)
                      -.+|++....   + ..+.+|...+.++.|+|+.+ .+++++-|..+..||+++....  ....-......++|+....-
T Consensus        93 aiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~  172 (1081)
T KOG0309|consen   93 AIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPN  172 (1081)
T ss_pred             hhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcc
Confidence            4456654322   1 34578899999999999655 6788899999999999987765  22234455678999875444


Q ss_pred             EEEecCCCcEEEEEeeC
Q psy15612        115 IVTGSGDKKATVYEVIY  131 (131)
Q Consensus       115 l~~~~~d~~i~vw~~~~  131 (131)
                      +...+..+.+.+||++|
T Consensus       173 vlasshg~~i~vwd~r~  189 (1081)
T KOG0309|consen  173 VLASSHGNDIFVWDLRK  189 (1081)
T ss_pred             hhhhccCCceEEEeccC
Confidence            44455667899999986

>smart00320 WD40 WD40 repeats

Probab=98.26  E-value=6.7e-06  Score=33.83  Aligned_cols=33  Identities=24%  Similarity=0.427  Sum_probs=29.0

Q ss_pred             ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         96 QSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ...+...+.+++|++.++.+++++.|+.+++|+
T Consensus         8 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        8 LKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            345677899999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>smart00320 WD40 WD40 repeats

Probab=98.26  E-value=7.8e-06  Score=33.60  Aligned_cols=37  Identities=16%  Similarity=0.459  Sum_probs=31.2

Q ss_pred             ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q psy15612         10 RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLH   46 (131)
Q Consensus        10 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~   46 (131)
                      +.+..+ .+...+.++.|++.+..+++++.++.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            444455 5778899999999999999999999999985

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG1275|consensus

Probab=98.25  E-value=2.4e-05  Score=53.99  Aligned_cols=122  Identities=8%  Similarity=0.104  Sum_probs=78.5

Q ss_pred             EEeCCCCceeeeecCCC-CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC-
Q psy15612          3 LQSVSPGRQLQQHDFSS-QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK-   79 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~-   79 (131)
                      -+|+++.+..+...... .|.-|+.  +++.+.+|...|+|.+-|..+.+. .++.+|.+.+.++..  .|+.+++++. 
T Consensus       161 ~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv--~GNlLitCG~S  236 (1118)
T KOG1275|consen  161 HIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV--QGNLLITCGYS  236 (1118)
T ss_pred             eeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec--cCCeEEEeecc
Confidence            35666666655553332 4666654  678999999999999999998874 788999999888765  5899888765 


Q ss_pred             --------CCeEEEeeCCCCceEEecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEE
Q psy15612         80 --------DNLLNAWRTPYGASIFQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYE  128 (131)
Q Consensus        80 --------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~  128 (131)
                              |..+++||++.-+.+.-........-+.|+|. ...++..+..|...+-|
T Consensus       237 ~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd  294 (1118)
T KOG1275|consen  237 MRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVD  294 (1118)
T ss_pred             cccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeecc
Confidence                    44589999987665522222222233444543 22344444445544443

>KOG4640|consensus

Probab=98.25  E-value=1.3e-05  Score=53.03  Aligned_cols=70  Identities=13%  Similarity=0.097  Sum_probs=57.6

Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC-CCCCeE-EEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVL-SCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-~~~~v~-~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ...+..+.|+|.-..+|.+..+|.+.+.... .+.+...+ ++..+. +++|.|||+.++.|-.||+|++.|+
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dv   91 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDV   91 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEc
Confidence            4467789999999999999999988887776 55553333 555555 9999999999999999999999986

>KOG1645|consensus

Probab=98.19  E-value=1.7e-05  Score=49.97  Aligned_cols=77  Identities=16%  Similarity=0.165  Sum_probs=62.0

Q ss_pred             eeccccceEEEEEccCCC-EEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEeeC
Q psy15612         55 LHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        55 ~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~~  131 (131)
                      +..+...|.+++|||..+ .+..++.++.|++.|+++............+++++|.-+. ++++.|-..|.|.++|++.
T Consensus       189 lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~  267 (463)
T KOG1645|consen  189 LPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ  267 (463)
T ss_pred             ccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence            456677899999999877 5778899999999999987776333334788999998764 5678888899999999873

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.19  E-value=2.7e-05  Score=49.38  Aligned_cols=77  Identities=12%  Similarity=0.179  Sum_probs=53.1

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccc------------------cceE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHE------------------SCVL   63 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~------------------~~v~   63 (131)
                      .++|+++++..........+....|+|+|+.++... ++.|.+.+..++...++....                  ..-.
T Consensus        26 ~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~  104 (353)
T PF00930_consen   26 YIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRS  104 (353)
T ss_dssp             EEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSB
T ss_pred             EEEecCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceecccccccccc
Confidence            578999887666554467889999999999998875 467999988776544332111                  1234


Q ss_pred             EEEEccCCCEEEEeCC
Q psy15612         64 SLRFAACGKWFVSTGK   79 (131)
Q Consensus        64 ~~~~~~~~~~~~~~~~   79 (131)
                      .+-||||+++|+....
T Consensus       105 ~~~WSpd~~~la~~~~  120 (353)
T PF00930_consen  105 AVWWSPDSKYLAFLRF  120 (353)
T ss_dssp             SEEE-TTSSEEEEEEE
T ss_pred             ceEECCCCCEEEEEEE
Confidence            6889999999886533

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG2079|consensus

Probab=98.18  E-value=2.9e-05  Score=54.46  Aligned_cols=100  Identities=11%  Similarity=0.145  Sum_probs=70.7

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCC---CC
Q psy15612         29 SGEWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKES---SS  102 (131)
Q Consensus        29 ~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~---~~  102 (131)
                      .+..++.|+..|.+...|..+.-.  ..-....++|.+++|+.+|+.++.|-.+|.|.+||+..++.. ....++   ..
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~  177 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG  177 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence            455678888888888888876533  222334678999999999999999999999999999988776 333333   33


Q ss_pred             eEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612        103 VLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       103 v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +..+.+..++..+.++...|.  +|++.
T Consensus       178 vi~v~~t~~nS~llt~D~~Gs--f~~lv  203 (1206)
T KOG2079|consen  178 VIFVGRTSQNSKLLTSDTGGS--FWKLV  203 (1206)
T ss_pred             EEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence            444444445556667665554  77764

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.17  E-value=0.00031  Score=45.91  Aligned_cols=122  Identities=13%  Similarity=0.127  Sum_probs=69.6

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC------------CeEEeeccccceEEEEEc
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP------------DKYQLHLHESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~------------~~~~~~~~~~~v~~~~~~   68 (131)
                      |.+||+++++.+..+.... |..+.|++++.+++..+.+ .+.+.+....            ....+..-...|.+..|.
T Consensus       128 i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~  205 (443)
T PF04053_consen  128 ICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWV  205 (443)
T ss_dssp             EEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEE
T ss_pred             EEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEE
Confidence            4689999999999887664 8999999999999988765 5777665433            233333335678889998


Q ss_pred             cCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         69 ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        69 ~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+  .++-.... .++.  +..|+.-....-..++.=+...|..+.+.....|+.+..+.+
T Consensus       206 ~d--~fiYtT~~-~lkY--l~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~l  261 (443)
T PF04053_consen  206 ED--CFIYTTSN-HLKY--LVNGETGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYEL  261 (443)
T ss_dssp             TT--EEEEE-TT-EEEE--EETTEEEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE-
T ss_pred             cC--EEEEEcCC-eEEE--EEcCCcceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEE
Confidence            66  44444434 6665  444555433333456666777777778888888888777654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.17  E-value=0.00051  Score=44.16  Aligned_cols=128  Identities=12%  Similarity=0.087  Sum_probs=86.1

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      .+.|..+.+.............++++|+++.+..+..   ++++.+.|..+........-......+++.|+|..++...
T Consensus        99 ~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~  178 (381)
T COG3391          99 SVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTN  178 (381)
T ss_pred             EEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEe
Confidence            4556566666655544447788999999988877655   6788888988877633222222338999999999776654


Q ss_pred             -CCCeEEEeeCCCCceEE-----ecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612         79 -KDNLLNAWRTPYGASIF-----QSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV  129 (131)
Q Consensus        79 -~~~~i~~w~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~  129 (131)
                       .++.+.+.|..+.....     ..........+.++|+|+++......   +.+...|.
T Consensus       179 ~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~  238 (381)
T COG3391         179 SDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDT  238 (381)
T ss_pred             cCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeC
Confidence             67889999966544332     23344556788999999977655433   35655553

>KOG1920|consensus

Probab=98.14  E-value=0.00027  Score=50.36  Aligned_cols=67  Identities=6%  Similarity=0.009  Sum_probs=56.7

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEE
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNA   85 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~   85 (131)
                      ..|.++.|..++..++.+...|.+.+.|..+........-...|.++.||||+..++..+...++.+
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~  135 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLF  135 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEE
Confidence            4789999999999999999999999999888877666667788999999999999888777666544

>KOG1008|consensus

Probab=98.14  E-value=1.3e-06  Score=57.84  Aligned_cols=129  Identities=9%  Similarity=0.116  Sum_probs=83.3

Q ss_pred             CEEEeCCCC--cee--eee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEcc-CCCE
Q psy15612          1 MYLQSVSPG--RQL--QQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAA-CGKW   73 (131)
Q Consensus         1 i~iwd~~~~--~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~   73 (131)
                      +.|||..++  .+.  ..+  +......+++|..+.+.+.+|.....+.++|++........-....+..+...| .+.+
T Consensus       131 ~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY  210 (783)
T KOG1008|consen  131 LKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNY  210 (783)
T ss_pred             ccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCc
Confidence            468998765  222  122  234456688888888889999888899999998544322222233455677777 6777


Q ss_pred             EEEeCCCCeEEEee-CCCCceE-Ee-----cCCCCCeEEEEECCCCC-EEEEecC-CCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWR-TPYGASI-FQ-----SKESSSVLSCDISADDK-YIVTGSG-DKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~-~~~~~~~-~~-----~~~~~~v~~~~~~~~~~-~l~~~~~-d~~i~vw~~~  130 (131)
                      +++.. |+.+.+|| .++-+.. ..     ......+..++|.|..+ .+++... .++|+.+|+.
T Consensus       211 ~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  211 FCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             eeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence            77666 99999999 4443332 11     12334589999999644 3444444 4678888864

>KOG2066|consensus

Probab=98.11  E-value=5.9e-05  Score=51.34  Aligned_cols=98  Identities=16%  Similarity=0.108  Sum_probs=74.1

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCC
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKE   99 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~   99 (131)
                      .+.++++  .+++++.|...|.+++++..... .+...|.+.      ..+|.++++++.||++.+..+.+.+.......
T Consensus        41 ~is~~av--~~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df  111 (846)
T KOG2066|consen   41 AISCCAV--HDKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF  111 (846)
T ss_pred             HHHHHHh--hcceeeeccccceEEEEecCCcc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEec
Confidence            3445555  47789999999999999887654 333444433      56799999999999999999888887766666


Q ss_pred             CCCeEEEEECCC-----CCEEEEecCCCcEEEE
Q psy15612        100 SSSVLSCDISAD-----DKYIVTGSGDKKATVY  127 (131)
Q Consensus       100 ~~~v~~~~~~~~-----~~~l~~~~~d~~i~vw  127 (131)
                      ..++.+++++|+     .+.+++|+..| +.++
T Consensus       112 ~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~  143 (846)
T KOG2066|consen  112 KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLS  143 (846)
T ss_pred             CCcceeEEeccchhhhhhhheeecCcce-EEEe
Confidence            778889999997     56788888776 5544

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.07  E-value=0.00069  Score=41.94  Aligned_cols=130  Identities=16%  Similarity=0.135  Sum_probs=84.5

Q ss_pred             CEEEeCC-CCceeeee-cCCCCeEEEEECCCCCEEEEEeC------------------CCcEEEEeCCCCCe-EE--e--
Q psy15612          1 MYLQSVS-PGRQLQQH-DFSSQIFSLGYCPSGEWLAVGME------------------NSNVEVLHALKPDK-YQ--L--   55 (131)
Q Consensus         1 i~iwd~~-~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~------------------~~~v~~~~~~~~~~-~~--~--   55 (131)
                      |-+||.+ +.+.+..+ .+.-..-.+.+.|||+.|+.+..                  +..+...|..++++ .+  +  
T Consensus        79 IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~  158 (305)
T PF07433_consen   79 IGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPP  158 (305)
T ss_pred             EEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCc
Confidence            4578888 55666666 45555667888999988876532                  23456667777774 22  3  


Q ss_pred             eccccceEEEEEccCCCEEEEeCCCCe-------EEEeeCCCCceEE------ecCCCCCeEEEEECCCCCEEEEecC-C
Q psy15612         56 HLHESCVLSLRFAACGKWFVSTGKDNL-------LNAWRTPYGASIF------QSKESSSVLSCDISADDKYIVTGSG-D  121 (131)
Q Consensus        56 ~~~~~~v~~~~~~~~~~~~~~~~~~~~-------i~~w~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~-d  121 (131)
                      .-|...+..+++.++|..++.....+.       +-+++....-...      .....+-+-++++++++.+++.++. .
T Consensus       159 ~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrG  238 (305)
T PF07433_consen  159 DLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRG  238 (305)
T ss_pred             cccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCC
Confidence            336778999999999987776544332       3334332211111      1124577899999999998866654 7


Q ss_pred             CcEEEEEee
Q psy15612        122 KKATVYEVI  130 (131)
Q Consensus       122 ~~i~vw~~~  130 (131)
                      +.+.+||..
T Consensus       239 g~~~~~d~~  247 (305)
T PF07433_consen  239 GRVAVWDAA  247 (305)
T ss_pred             CEEEEEECC
Confidence            789999853

>KOG1920|consensus

Probab=98.06  E-value=0.00023  Score=50.72  Aligned_cols=129  Identities=14%  Similarity=0.101  Sum_probs=78.1

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEe---CCCcEEEEeCCCCCeE----EeeccccceEEEEEccCCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGM---ENSNVEVLHALKPDKY----QLHLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~---~~~~v~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~   72 (131)
                      |++||.+ |..-..- ...+.-.+++|-|.|..+++..   .++.|.+|.-.+-+..    ........+..++|+.++.
T Consensus       224 irV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sd  302 (1265)
T KOG1920|consen  224 IRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSD  302 (1265)
T ss_pred             EEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCC
Confidence            4677766 4333222 2334456899999999988753   3556888887654422    2233344588999999999


Q ss_pred             EEEE---eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEeeC
Q psy15612         73 WFVS---TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        73 ~~~~---~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~~  131 (131)
                      .++.   ......+++|...+-..-  .....+.... +.|+|... .+.....+|...++++.|
T Consensus       303 iLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~-~~W~p~~~~~L~v~~~sG~~~v~~~~~  366 (1265)
T KOG1920|consen  303 ILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL-LMWDPVTEKTLHVLRESGQRLVRDFAW  366 (1265)
T ss_pred             ceeeeecccccceEEEEEecCeEEEEEEEEecccccc-ccccCCCceeEEEEecCCcEEEEEEEE
Confidence            8887   444555999998876654  1111222222 77887432 233333566766666543

>KOG2395|consensus

Probab=98.05  E-value=0.00077  Score=44.47  Aligned_cols=124  Identities=14%  Similarity=0.230  Sum_probs=83.7

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCE--E-----EEEeCCCcEEEEeCCCCCe---EEeecc----ccceEEEEEc
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEW--L-----AVGMENSNVEVLHALKPDK---YQLHLH----ESCVLSLRFA   68 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~--l-----~~~~~~~~v~~~~~~~~~~---~~~~~~----~~~v~~~~~~   68 (131)
                      --|++.|+.+........|.-+.+.|+.+.  +     +.|-.+..|.-||.+-...   .....|    .....|.+-.
T Consensus       360 klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT  439 (644)
T KOG2395|consen  360 KLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT  439 (644)
T ss_pred             eeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceeeec
Confidence            347788888877766666777888886442  2     3456677899999873221   111221    2234455555


Q ss_pred             cCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         69 ACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        69 ~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+| +++.++.+|.|++||- .+..-  .+.+.+..|..+..+.+|++++..+.. .+.+-++
T Consensus       440 ~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~t-yLlLi~t  499 (644)
T KOG2395|consen  440 ESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKT-YLLLIDT  499 (644)
T ss_pred             CCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEeccc-EEEEEEE
Confidence            444 6888999999999997 44443  566788999999999999999877753 4555554

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.05  E-value=0.00091  Score=42.82  Aligned_cols=90  Identities=22%  Similarity=0.255  Sum_probs=56.1

Q ss_pred             EEEeCCCCceeeeecCCCCeE-EEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIF-SLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      ..+|..+|+.+........+. ...  .++..++.++.++.+..+|..+++..-.......+.+.-.. .+..++.++.+
T Consensus        78 ~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v-~~~~v~v~~~~  154 (377)
T TIGR03300        78 VALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLV-ANGLVVVRTND  154 (377)
T ss_pred             EEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEE-ECCEEEEECCC
Confidence            456777888776654333322 121  24667778888999999999888753221112222111011 24566677789


Q ss_pred             CeEEEeeCCCCceE
Q psy15612         81 NLLNAWRTPYGASI   94 (131)
Q Consensus        81 ~~i~~w~~~~~~~~   94 (131)
                      +.+..+|..+|+.+
T Consensus       155 g~l~a~d~~tG~~~  168 (377)
T TIGR03300       155 GRLTALDAATGERL  168 (377)
T ss_pred             CeEEEEEcCCCcee
Confidence            99999999999887

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1832|consensus

Probab=98.02  E-value=1.3e-05  Score=55.51  Aligned_cols=112  Identities=15%  Similarity=0.243  Sum_probs=80.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCC--eEEEeeCCC-C
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDN--LLNAWRTPY-G   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~i~~w~~~~-~   91 (131)
                      .+...-.+++|+.+.++|+.|...|.++++++.++.. ....+|.+.+.-+.=+.||..+++.+.-.  ...+|++.. +
T Consensus      1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~ 1178 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTG 1178 (1516)
T ss_pred             ccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccccc
Confidence            5777889999999999999999999999999998875 66788999999998888999877654332  466898764 1


Q ss_pred             ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         92 ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .....   -..-.++.|+.....-+.|.....+.+||++
T Consensus      1179 ~~~Hs---f~ed~~vkFsn~~q~r~~gt~~d~a~~YDvq 1214 (1516)
T KOG1832|consen 1179 GPRHS---FDEDKAVKFSNSLQFRALGTEADDALLYDVQ 1214 (1516)
T ss_pred             Ccccc---ccccceeehhhhHHHHHhcccccceEEEecc
Confidence            11111   1223466676654444445555567788764

>KOG0882|consensus

Probab=98.00  E-value=0.00043  Score=44.67  Aligned_cols=94  Identities=21%  Similarity=0.237  Sum_probs=72.2

Q ss_pred             EeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC------CceEEe----------
Q psy15612         36 GMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY------GASIFQ----------   96 (131)
Q Consensus        36 ~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~------~~~~~~----------   96 (131)
                      ...++.+.++|-....+   ....-|.++|..+.+++-+..+.+....|.|.-|....      .+....          
T Consensus       118 ~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f  197 (558)
T KOG0882|consen  118 LFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGF  197 (558)
T ss_pred             cccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcc
Confidence            34578899999865542   33456889999999999999999998899999998762      111111          


Q ss_pred             cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         97 SKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        97 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ........++.|+|++..+.+.+.|.+|+++++
T Consensus       198 ~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~  230 (558)
T KOG0882|consen  198 PKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVF  230 (558)
T ss_pred             cccccCccceEEccccCcccccCcccEEEEEEe
Confidence            123566789999999999999999999999876

>KOG2444|consensus

Probab=97.96  E-value=0.00011  Score=43.24  Aligned_cols=102  Identities=13%  Similarity=0.064  Sum_probs=68.5

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCC--CeEEeeccccceEEE-EEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCC-CCe
Q psy15612         29 SGEWLAVGMENSNVEVLHALKP--DKYQLHLHESCVLSL-RFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKES-SSV  103 (131)
Q Consensus        29 ~~~~l~~~~~~~~v~~~~~~~~--~~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~-~~v  103 (131)
                      .+..+++|+.++.+.+|.....  .......-...+.++ .--.++.+.++++.++.|+.|+..-.+.+ ....|+ ...
T Consensus        69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~  148 (238)
T KOG2444|consen   69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG  148 (238)
T ss_pred             cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence            3567888999999999887522  111111112222222 22224567889999999999999888877 555566 566


Q ss_pred             EEEEECCCCCEEEEe--cCCCcEEEEEee
Q psy15612        104 LSCDISADDKYIVTG--SGDKKATVYEVI  130 (131)
Q Consensus       104 ~~~~~~~~~~~l~~~--~~d~~i~vw~~~  130 (131)
                      .....+..++.+.++  |.|..++.|++.
T Consensus       149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve  177 (238)
T KOG2444|consen  149 EELIVVGSDEFLKIADTSHDRVLKKWNVE  177 (238)
T ss_pred             ceeEEecCCceEEeeccccchhhhhcchh
Confidence            666667777877777  788888888874

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.92  E-value=0.0013  Score=44.75  Aligned_cols=106  Identities=11%  Similarity=0.059  Sum_probs=64.1

Q ss_pred             CeEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEE--
Q psy15612         20 QIFSLGYCPSGEWLAVGMEN------------SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNA--   85 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~------------~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~--   85 (131)
                      ......|+|+|..+.+....            +.+.+.++..+....  .....|..+.|||||..++... ++.+.+  
T Consensus       398 ~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~  474 (591)
T PRK13616        398 SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAV  474 (591)
T ss_pred             CCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEE
Confidence            47789999998887776432            122222333333221  2345799999999999887655 456666  


Q ss_pred             -eeCCCCceEE-----ec-CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         86 -WRTPYGASIF-----QS-KESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        86 -w~~~~~~~~~-----~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                       -....|....     +. .....+..+.|.+++.++ .+..++...+|.+
T Consensus       475 Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v  524 (591)
T PRK13616        475 VEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV  524 (591)
T ss_pred             EEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence             4444554221     11 233446889999998865 4444454556654

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.87  E-value=0.00077  Score=43.71  Aligned_cols=95  Identities=17%  Similarity=0.191  Sum_probs=60.1

Q ss_pred             EEEEECCCCCEEEEE-eCC----CcEEEEeCCCCCeEE--eeccccceEEEEEccCCCEEEEeCC-----------CCeE
Q psy15612         22 FSLGYCPSGEWLAVG-MEN----SNVEVLHALKPDKYQ--LHLHESCVLSLRFAACGKWFVSTGK-----------DNLL   83 (131)
Q Consensus        22 ~~~~~~~~~~~l~~~-~~~----~~v~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~-----------~~~i   83 (131)
                      ....++|++++++.+ +..    ..++++|+.+++...  +...  ....+.|.++++.|+....           ...+
T Consensus       127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v  204 (414)
T PF02897_consen  127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV  204 (414)
T ss_dssp             EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred             eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence            467889999998765 333    359999999887422  2221  1223999999887765432           2337


Q ss_pred             EEeeCCCCce---E-EecCCCCC-eEEEEECCCCCEEEEe
Q psy15612         84 NAWRTPYGAS---I-FQSKESSS-VLSCDISADDKYIVTG  118 (131)
Q Consensus        84 ~~w~~~~~~~---~-~~~~~~~~-v~~~~~~~~~~~l~~~  118 (131)
                      +.|.+.++..   + +....... ...+..++++++++..
T Consensus       205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~  244 (414)
T PF02897_consen  205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFIS  244 (414)
T ss_dssp             EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEE
T ss_pred             EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEE
Confidence            7788776543   2 33333444 6788899999987653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG3617|consensus

Probab=97.87  E-value=1.9e-05  Score=54.42  Aligned_cols=71  Identities=18%  Similarity=0.248  Sum_probs=61.5

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~   89 (131)
                      -.+.+++|+|..-.|+.|-.-|.+.+|...+.+...+ ..|+.++..+.|||+|..+.++..-+.+.+|...
T Consensus        60 ~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   60 VHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            3467899999988899998889999999988776554 5689999999999999999999999999999754

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.87  E-value=0.0008  Score=45.65  Aligned_cols=103  Identities=11%  Similarity=-0.032  Sum_probs=61.4

Q ss_pred             CCeEEEEECCCCCEEEEEe------CCC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC-CeEEEe---
Q psy15612         19 SQIFSLGYCPSGEWLAVGM------ENS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD-NLLNAW---   86 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~------~~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~i~~w---   86 (131)
                      ..+...+++|+|+.++...      .++  .+.+.+..... ..+..-. ....-.|+|||+.+.+.... ...++.   
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~~lt~g~-~~t~PsWspDG~~lw~v~dg~~~~~v~~~~  427 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA-VQVLEGH-SLTRPSWSLDADAVWVVVDGNTVVRVIRDP  427 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc-eeeecCC-CCCCceECCCCCceEEEecCcceEEEeccC
Confidence            3577889999999887654      233  45555543322 3332222 36788999998877766433 222222   


Q ss_pred             --------eCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612         87 --------RTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATV  126 (131)
Q Consensus        87 --------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  126 (131)
                              ++..++...  ...+.|..+.|||||..++... ++++.+
T Consensus       428 ~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        428 ATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             CCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence                    332222111  2356799999999999887655 355554

>KOG0882|consensus

Probab=97.85  E-value=0.0009  Score=43.28  Aligned_cols=79  Identities=15%  Similarity=0.106  Sum_probs=64.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC------CCe----------EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK------PDK----------YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~------~~~----------~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      -|..+|..+.++|.+....+....|.|.-|....      .++          ..+...+....++.|+|+|..+.+-+.
T Consensus       142 lH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~  221 (558)
T KOG0882|consen  142 LHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP  221 (558)
T ss_pred             cccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCc
Confidence            4788999999999999999999999999999873      111          112345667889999999999999999


Q ss_pred             CCeEEEeeCCCCceE
Q psy15612         80 DNLLNAWRTPYGASI   94 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~   94 (131)
                      |..|++++..+|+..
T Consensus       222 DrkVR~F~~KtGklv  236 (558)
T KOG0882|consen  222 DRKVRGFVFKTGKLV  236 (558)
T ss_pred             ccEEEEEEeccchhh
Confidence            999999999888664

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.85  E-value=0.00032  Score=43.34  Aligned_cols=113  Identities=13%  Similarity=0.255  Sum_probs=78.4

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-e-----EEeeccc------------cceEEEEEccCC--CEEEE
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-K-----YQLHLHE------------SCVLSLRFAACG--KWFVS   76 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~-----~~~~~~~------------~~v~~~~~~~~~--~~~~~   76 (131)
                      ....|.++.|...|.++++|...|.|.+|.-.... +     ..++.|.            ..|..+.|..++  ..++.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            44679999999999999999999999999875433 2     1233333            345667877653  35778


Q ss_pred             eCCCCeEEEeeCCCCceE--------------------------------------------EecCCCCCeEEEEECCCC
Q psy15612         77 TGKDNLLNAWRTPYGASI--------------------------------------------FQSKESSSVLSCDISADD  112 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~--------------------------------------------~~~~~~~~v~~~~~~~~~  112 (131)
                      .+.|.+|++|-+......                                            ....|+..+.+++++.+.
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~  184 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK  184 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence            888999999975422000                                            011356667889998887


Q ss_pred             CEEEEecCCCcEEEEEee
Q psy15612        113 KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       113 ~~l~~~~~d~~i~vw~~~  130 (131)
                      ..++++ .|=.|.+|++.
T Consensus       185 et~lSa-DdLrINLWnl~  201 (460)
T COG5170         185 ETLLSA-DDLRINLWNLE  201 (460)
T ss_pred             heeeec-cceeeeecccc
Confidence            777665 46678999863

>KOG4190|consensus

Probab=97.82  E-value=2.9e-05  Score=51.24  Aligned_cols=94  Identities=15%  Similarity=0.049  Sum_probs=63.6

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECC--CCCEE-EEEeCCCcEEEEeCCCCCe-E--Ee---eccccceEEEEEc
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCP--SGEWL-AVGMENSNVEVLHALKPDK-Y--QL---HLHESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~--~~~~l-~~~~~~~~v~~~~~~~~~~-~--~~---~~~~~~v~~~~~~   68 (131)
                      |.+||-=-++.+...   ...+.+..+..-|  +...+ +.++...+|+++|.+..+- .  ++   ......+.+++..
T Consensus       806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa  885 (1034)
T KOG4190|consen  806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVA  885 (1034)
T ss_pred             ceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEec
Confidence            567886666665533   1112222222222  33343 3447788999999987762 1  11   3345678899999


Q ss_pred             cCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         69 ACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        69 ~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +.|++++.+-..|.+.+.|.++|+.+
T Consensus       886 ~~GN~lAa~LSnGci~~LDaR~G~vI  911 (1034)
T KOG4190|consen  886 DKGNKLAAALSNGCIAILDARNGKVI  911 (1034)
T ss_pred             cCcchhhHHhcCCcEEEEecCCCcee
Confidence            99999999999999999999999876

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.81  E-value=0.0029  Score=40.79  Aligned_cols=109  Identities=10%  Similarity=0.098  Sum_probs=77.6

Q ss_pred             eEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC---CCeEEEeeCCCCceEEe
Q psy15612         21 IFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK---DNLLNAWRTPYGASIFQ   96 (131)
Q Consensus        21 v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~i~~w~~~~~~~~~~   96 (131)
                      ...++.++.+..+. ....+..+.+.|..+...............++++|+++.+..+..   ++.+.+.|..+.+....
T Consensus        76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~  155 (381)
T COG3391          76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTAT  155 (381)
T ss_pred             ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEE
Confidence            34667777777544 444567899999877776444333347789999999988776644   68899999988887733


Q ss_pred             cCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612         97 SKESSSVLSCDISADDKYIVTGS-GDKKATVYEV  129 (131)
Q Consensus        97 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~  129 (131)
                      ...+.....++++|+|+.++... .++.+.+.|.
T Consensus       156 ~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~  189 (381)
T COG3391         156 IPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDT  189 (381)
T ss_pred             EecCCCcceEEECCCCCeEEEEecCCCeEEEEeC
Confidence            43333348999999999776554 5778887764

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.80  E-value=0.0026  Score=39.95  Aligned_cols=112  Identities=12%  Similarity=0.131  Sum_probs=69.6

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC-Cc-
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY-GA-   92 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~-~~-   92 (131)
                      ...++|.+++-- ++. ++.+. ...+.+|++...+ ......+...+..+.....+++++.+.....+.++.... +. 
T Consensus        86 ~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~  162 (321)
T PF03178_consen   86 EVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNK  162 (321)
T ss_dssp             EESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-
T ss_pred             eecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEccCCE
Confidence            567888888766 444 44443 4689999998777 544333333333333344467888888877777764433 22 


Q ss_pred             eE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         93 SI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        93 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..  .....+..+.++.+-++++.++.+..+|.+.++...
T Consensus       163 l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  163 LILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             EEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            22  222345667888887666788888889999887653

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.79  E-value=0.00022  Score=31.56  Aligned_cols=32  Identities=22%  Similarity=0.258  Sum_probs=28.6

Q ss_pred             CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         98 KESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .....|..++|+|...+++.+..+|.|.++.+
T Consensus         9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl   40 (47)
T PF12894_consen    9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRL   40 (47)
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence            34567999999999999999999999999876

>KOG4649|consensus

Probab=97.78  E-value=0.0024  Score=38.80  Aligned_cols=81  Identities=14%  Similarity=0.204  Sum_probs=55.4

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC-CCCCeEEEE
Q psy15612         30 GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCD  107 (131)
Q Consensus        30 ~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-~~~~v~~~~  107 (131)
                      |.+++.|...+.+++.+..++.. -.+.....-=......+++..+..++.|++.+..|.++..++.... .++...+.+
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~  142 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPV  142 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccce
Confidence            66788899999999999998864 3322222111234456789999999999999999999888873333 333334445


Q ss_pred             ECC
Q psy15612        108 ISA  110 (131)
Q Consensus       108 ~~~  110 (131)
                      ..|
T Consensus       143 i~~  145 (354)
T KOG4649|consen  143 IAP  145 (354)
T ss_pred             ecC
Confidence            555

>KOG1912|consensus

Probab=97.78  E-value=0.00016  Score=49.60  Aligned_cols=99  Identities=19%  Similarity=0.254  Sum_probs=77.8

Q ss_pred             EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe---------CCCCeEEEeeCCCCceE-E---ec
Q psy15612         32 WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST---------GKDNLLNAWRTPYGASI-F---QS   97 (131)
Q Consensus        32 ~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~~i~~w~~~~~~~~-~---~~   97 (131)
                      .++.|...|+|.++|+.++.+ ..+..|...|.++.|-...+.+-.+         +..+.+.+-|+++|... +   ..
T Consensus       439 LvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~  518 (1062)
T KOG1912|consen  439 LVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQK  518 (1062)
T ss_pred             eEEeecCCceEEEEEecchhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCC
Confidence            467889999999999998886 5567799999999997655443222         22345788899998776 2   34


Q ss_pred             CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         98 KESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ....+|..+..+..++|++..-.+.-+-+||++
T Consensus       519 ~despI~~irvS~~~~yLai~Fr~~plEiwd~k  551 (1062)
T KOG1912|consen  519 PDESPIRAIRVSSSGRYLAILFRREPLEIWDLK  551 (1062)
T ss_pred             CCcCcceeeeecccCceEEEEecccchHHHhhc
Confidence            467889999999999999999999999999873

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.78  E-value=0.00047  Score=30.50  Aligned_cols=34  Identities=24%  Similarity=0.512  Sum_probs=29.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK   49 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~   49 (131)
                      .....|..+.|+|...+++.+..+|.|.++.+..
T Consensus         9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~   42 (47)
T PF12894_consen    9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRLNW   42 (47)
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCCeEEEEECCC
Confidence            3456799999999999999999999999998843

>KOG2114|consensus

Probab=97.76  E-value=0.0038  Score=43.49  Aligned_cols=110  Identities=12%  Similarity=0.068  Sum_probs=75.2

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEeCC--CCC---eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHAL--KPD---KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~--~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      +.++.+++.+.+-+.+++|..+|.|..+.-.  ..+   ..-......+|+.+++..+++..+.......|.+|.+....
T Consensus       125 ~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~  204 (933)
T KOG2114|consen  125 PSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRT  204 (933)
T ss_pred             CCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCC
Confidence            4568899999999999999999999988532  111   12223446789999999998874444445668888887433


Q ss_pred             eE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         93 SI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        93 ~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +.  ....++....|.++++....+++++. ..+.+|+
T Consensus       205 p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~  241 (933)
T KOG2114|consen  205 PSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYD  241 (933)
T ss_pred             cceeeeccCCccceeeecCCCCccEEEecC-ceEEEEc
Confidence            22  45567888899999876664544443 3455554

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.65  E-value=0.0049  Score=38.59  Aligned_cols=109  Identities=11%  Similarity=0.048  Sum_probs=69.6

Q ss_pred             Cceeeee-cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCC--CC----e--EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          9 GRQLQQH-DFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALK--PD----K--YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         9 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~--~~----~--~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      +..+..+ .+-..-+.++||||++.++.+.. .+.+..+++..  ..    .  .......+..-.++...+|++.+++.
T Consensus       152 g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~  231 (307)
T COG3386         152 GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAV  231 (307)
T ss_pred             CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecc
Confidence            4444444 33556789999999988776644 46777777652  11    1  11223445666788888899886555


Q ss_pred             CCC-eEEEeeCCCCceE-EecCCCCCeEEEEEC-CCCCEEEEe
Q psy15612         79 KDN-LLNAWRTPYGASI-FQSKESSSVLSCDIS-ADDKYIVTG  118 (131)
Q Consensus        79 ~~~-~i~~w~~~~~~~~-~~~~~~~~v~~~~~~-~~~~~l~~~  118 (131)
                      .++ .+..|+.. |+.+ ...-+...+.+++|- |+.+.|+..
T Consensus       232 ~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iT  273 (307)
T COG3386         232 WGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYIT  273 (307)
T ss_pred             cCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEE
Confidence            554 89999988 8777 333333777888885 444555433

>KOG4649|consensus

Probab=97.63  E-value=0.0044  Score=37.69  Aligned_cols=100  Identities=13%  Similarity=0.066  Sum_probs=67.0

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCe-EEEEE
Q psy15612         30 GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV-LSCDI  108 (131)
Q Consensus        30 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v-~~~~~  108 (131)
                      ..+++.|+..+.+.-.|..++...-...-..++.+-+.- -|.+++.++..+.+++.+..+|+........+.| .....
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~  101 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQC  101 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEE
Confidence            456677888888888888888753222222233332222 3778899999999999999999766221111222 23445


Q ss_pred             CCCCCEEEEecCCCcEEEEEee
Q psy15612        109 SADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       109 ~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .+++..+..++.|+.+...|.+
T Consensus       102 d~~~glIycgshd~~~yalD~~  123 (354)
T KOG4649|consen  102 DFDGGLIYCGSHDGNFYALDPK  123 (354)
T ss_pred             cCCCceEEEecCCCcEEEeccc
Confidence            7789999999999998887763

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.60  E-value=0.0067  Score=39.54  Aligned_cols=118  Identities=7%  Similarity=0.006  Sum_probs=58.9

Q ss_pred             CEEEeCCCCceeeeecCC---CCeEEEEECCC--CCE-EEEEeCCCcEEEEeC-CCCCe-----EEeec-----------
Q psy15612          1 MYLQSVSPGRQLQQHDFS---SQIFSLGYCPS--GEW-LAVGMENSNVEVLHA-LKPDK-----YQLHL-----------   57 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~---~~v~~~~~~~~--~~~-l~~~~~~~~v~~~~~-~~~~~-----~~~~~-----------   57 (131)
                      +.+||+++.+.++++...   ..+..++|..+  ... ++.+...++|..|-. ..+.-     ..+..           
T Consensus       224 l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~m  303 (461)
T PF05694_consen  224 LHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEM  303 (461)
T ss_dssp             EEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GG
T ss_pred             EEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccccccc
Confidence            579999999999988433   24667787554  333 233333444544433 33321     11111           


Q ss_pred             ------cccceEEEEEccCCCEEEEeCC-CCeEEEeeCCCCceEEec-----C---------------CCCCeEEEEECC
Q psy15612         58 ------HESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPYGASIFQS-----K---------------ESSSVLSCDISA  110 (131)
Q Consensus        58 ------~~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~~~~~-----~---------------~~~~v~~~~~~~  110 (131)
                            ...-+.++..|.|.++|..++. .|.++-||+.+.....+.     +               -.+...-+..|.
T Consensus       304 l~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~  383 (461)
T PF05694_consen  304 LKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSL  383 (461)
T ss_dssp             GGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-T
T ss_pred             ccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEcc
Confidence                  1345789999999999876654 788999999865443111     0               123346777888


Q ss_pred             CCCEEEEe
Q psy15612        111 DDKYIVTG  118 (131)
Q Consensus       111 ~~~~l~~~  118 (131)
                      ||+.++..
T Consensus       384 DGkRlYvT  391 (461)
T PF05694_consen  384 DGKRLYVT  391 (461)
T ss_dssp             TSSEEEEE
T ss_pred             CCeEEEEE
Confidence            88877654

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=97.59  E-value=0.0046  Score=36.83  Aligned_cols=126  Identities=16%  Similarity=0.142  Sum_probs=73.5

Q ss_pred             CEEEeCCCCceeeee-cCC----CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeeccccc----------eEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFS----SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHESC----------VLS   64 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~----~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~----------v~~   64 (131)
                      |+.+|.++|+.+... ...    .....+.....+..++.+..++.+..+|+.+++.. ........          ...
T Consensus        88 l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~  167 (238)
T PF13360_consen   88 LYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDING  167 (238)
T ss_dssp             EEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEE
T ss_pred             eEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeeccccc
Confidence            457888899888773 211    11222223334778888888899999999988852 22221111          112


Q ss_pred             EEEccCCCEEEEeCCCCe-EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         65 LRFAACGKWFVSTGKDNL-LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~-i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      -....++ .++.++.++. +.+ |..+++.+.... ....... ....+..++.++.++.+..||+.
T Consensus       168 ~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~-~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~  230 (238)
T PF13360_consen  168 SPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP-ISGIYSL-PSVDGGTLYVTSSDGRLYALDLK  230 (238)
T ss_dssp             EEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC-SS-ECEC-EECCCTEEEEEETTTEEEEEETT
T ss_pred             ceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec-CCCccCC-ceeeCCEEEEEeCCCEEEEEECC
Confidence            2222244 6666666665 555 999998764222 2333321 34566777777788999999864

...

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=97.57  E-value=0.0078  Score=38.96  Aligned_cols=120  Identities=12%  Similarity=0.091  Sum_probs=67.2

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eec-cccceEEEEEccCCCEEEEeCCC
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHL-HESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      .+|.++|+.+....... ...+.  ..+..++.++.++.+..+|..+++..- ... ..........  .+..++.++.+
T Consensus       270 ald~~tG~~~W~~~~~~-~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~  344 (394)
T PRK11138        270 ALDLRSGQIVWKREYGS-VNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSE  344 (394)
T ss_pred             EEECCCCCEEEeecCCC-ccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCC
Confidence            44566666554432211 11111  145567777788999999998876421 110 0111111111  25567788889


Q ss_pred             CeEEEeeCCCCceEEec-CCCCCe-EEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         81 NLLNAWRTPYGASIFQS-KESSSV-LSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        81 ~~i~~w~~~~~~~~~~~-~~~~~v-~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.+...|..+|+.+... .....+ ....+  .+..++.++.||.+..+++
T Consensus       345 G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        345 GYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             CEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence            99999999999988222 222222 22222  2446777788998877653

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.52  E-value=0.0017  Score=39.49  Aligned_cols=65  Identities=12%  Similarity=0.161  Sum_probs=45.5

Q ss_pred             EEEccCCCEEEEeCCCCeEEEeeCCC------CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         65 LRFAACGKWFVSTGKDNLLNAWRTPY------GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~i~~w~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.+.+|+.++... |..|.+-..++      +++...+.....-..++||||+.+|+.+...|+|+++|+.
T Consensus         3 ~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~   73 (282)
T PF15492_consen    3 LALSSDGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLM   73 (282)
T ss_pred             eeecCCCcEEEEEe-ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecc
Confidence            45677888777653 55555554432      2222333445556889999999999999999999999974

>KOG3621|consensus

Probab=97.52  E-value=0.0005  Score=46.49  Aligned_cols=89  Identities=16%  Similarity=0.119  Sum_probs=64.1

Q ss_pred             EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----E--Ee-eccccceEEEEEccCCC
Q psy15612          2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----Y--QL-HLHESCVLSLRFAACGK   72 (131)
Q Consensus         2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~--~~-~~~~~~v~~~~~~~~~~   72 (131)
                      ++|+...++.....  +..+.+.....+++..+++.|+..+.|.++.+.....    .  .. ..|+..|.++.|++++.
T Consensus        58 yl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~  137 (726)
T KOG3621|consen   58 YLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGM  137 (726)
T ss_pred             EEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEeccccc
Confidence            55665544443332  2344567777899999999999999999998765331    1  11 23678999999999999


Q ss_pred             EEEEeCCCCeEEEeeCCC
Q psy15612         73 WFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~   90 (131)
                      .+++|...|.+..-.+..
T Consensus       138 k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  138 KLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             EEeecCCCceEEEEEech
Confidence            999999999887665544

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.47  E-value=0.013  Score=39.63  Aligned_cols=113  Identities=9%  Similarity=0.050  Sum_probs=68.5

Q ss_pred             cCCCCeEEEEECCC----CCEEEEEeCCCcEEEEeCCCC-----Ce-EEeec-----cccceEEEEEccCCCEEEEeCCC
Q psy15612         16 DFSSQIFSLGYCPS----GEWLAVGMENSNVEVLHALKP-----DK-YQLHL-----HESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus        16 ~~~~~v~~~~~~~~----~~~l~~~~~~~~v~~~~~~~~-----~~-~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      +.-+.|..+.|.|-    ...++..-....|.+|.+...     +. ..-..     .+--...+.|+|....++.-...
T Consensus        54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~  133 (671)
T PF15390_consen   54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTAR  133 (671)
T ss_pred             eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecC
Confidence            34466889999884    223444455677999988522     21 11111     11123467899988877655444


Q ss_pred             CeEEEeeCCCCc-eE-EecCCCCCeEEEEECCCCCEEEEecCC-CcEEEEE
Q psy15612         81 NLLNAWRTPYGA-SI-FQSKESSSVLSCDISADDKYIVTGSGD-KKATVYE  128 (131)
Q Consensus        81 ~~i~~w~~~~~~-~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~vw~  128 (131)
                      ..-.+++.+... .+ .-....+.|.|.+|.+||+.++.+-.. =.-.+||
T Consensus       134 dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd  184 (671)
T PF15390_consen  134 DVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWD  184 (671)
T ss_pred             ceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence            433455554322 22 555678999999999999988665332 2456676

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.43  E-value=0.011  Score=37.24  Aligned_cols=124  Identities=15%  Similarity=0.131  Sum_probs=75.5

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEE---ECCC----CCEEEEEeC----------CCcEEEEeCCCC-----CeEE--
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLG---YCPS----GEWLAVGME----------NSNVEVLHALKP-----DKYQ--   54 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~---~~~~----~~~l~~~~~----------~~~v~~~~~~~~-----~~~~--   54 (131)
                      |++.|..+.+.+..+  ...+.+.+++   +..+    ..+++.|..          .|.+.++++...     ++..  
T Consensus         4 i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~   83 (321)
T PF03178_consen    4 IRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIH   83 (321)
T ss_dssp             EEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEE
T ss_pred             EEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEE
Confidence            578898888887766  4445555444   4432    456666532          278999999874     2222  


Q ss_pred             eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc-eE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         55 LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA-SI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        55 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~-~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ....++.|.+++-- +++ ++.+. ++.+.+|++...+ ..  ........+.++...  +++++.|...+.+.++..
T Consensus        84 ~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~  156 (321)
T PF03178_consen   84 STEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRY  156 (321)
T ss_dssp             EEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred             EEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEE
Confidence            23456778888765 454 43333 5789999998777 44  222233455555543  568888877677776644

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.36  E-value=0.011  Score=39.02  Aligned_cols=55  Identities=15%  Similarity=0.122  Sum_probs=34.5

Q ss_pred             CCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         71 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      |..++..+ ++.+.+||+.+++.+....... |..+.|++++++++..+.+ .+.+++
T Consensus       117 G~LL~~~~-~~~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~-~i~il~  171 (443)
T PF04053_consen  117 GNLLGVKS-SDFICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKD-SIYILK  171 (443)
T ss_dssp             SSSEEEEE-TTEEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred             CcEEEEEC-CCCEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCC-eEEEEE
Confidence            66565554 3479999999998885544443 8999999999999888765 566654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.34  E-value=0.015  Score=36.81  Aligned_cols=125  Identities=12%  Similarity=0.102  Sum_probs=72.3

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCeE---Eeecc-c----cce
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDKY---QLHLH-E----SCV   62 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~~---~~~~~-~----~~v   62 (131)
                      ++++|..+++.+..+.. +-...+..+|+++.++++.          ...-|.+||..+-...   .++.. .    ...
T Consensus        19 v~viD~d~~k~lGmi~~-g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~   97 (342)
T PF06433_consen   19 VYVIDADSGKLLGMIDT-GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYK   97 (342)
T ss_dssp             EEEEETTTTEEEEEEEE-ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--G
T ss_pred             EEEEECCCCcEEEEeec-ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccc
Confidence            46778888887665521 2223366799999987642          2335889999887642   22221 1    122


Q ss_pred             EEEEEccCCCEEEEe--CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         63 LSLRFAACGKWFVST--GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~--~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ..++++.||++++..  +-...+.+.|+..++.+.....++...-.-..+  +-+.+.|.||++....
T Consensus        98 ~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~--~~F~~lC~DGsl~~v~  163 (342)
T PF06433_consen   98 NMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGN--RGFSMLCGDGSLLTVT  163 (342)
T ss_dssp             GGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEET--TEEEEEETTSCEEEEE
T ss_pred             cceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCC--CceEEEecCCceEEEE
Confidence            347889999987764  455679999999888774443333322221111  2355566666655443

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.31  E-value=0.0064  Score=32.02  Aligned_cols=100  Identities=15%  Similarity=0.166  Sum_probs=62.5

Q ss_pred             eEEEEECC---C-CCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe
Q psy15612         21 IFSLGYCP---S-GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ   96 (131)
Q Consensus        21 v~~~~~~~---~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~   96 (131)
                      |.+|++.+   + ...|+.|+.|..|++|+-..- ...+. ....+..+.-... ..|+.+..+|+|-+|+-.  ..+..
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~-~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~RlWR   76 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEI-VAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRLWR   76 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcE-EEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCc--ceeee
Confidence            55666644   3 347899999999999987532 22222 3345666655544 668888899999999763  33322


Q ss_pred             cCCCCCeEEEEECC---CCC-EEEEecCCCcEE
Q psy15612         97 SKESSSVLSCDISA---DDK-YIVTGSGDKKAT  125 (131)
Q Consensus        97 ~~~~~~v~~~~~~~---~~~-~l~~~~~d~~i~  125 (131)
                      ......+.++++..   +|. .|++|-.+|++-
T Consensus        77 iKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   77 IKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            22334455565433   232 578888888764

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.31  E-value=0.019  Score=37.51  Aligned_cols=46  Identities=24%  Similarity=0.363  Sum_probs=33.1

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK   49 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~   49 (131)
                      |++|+.. |+.+..+  .. +.+..+.|+.+..++ +...+|.++++|+.+
T Consensus        63 I~iys~s-G~ll~~i~w~~-~~iv~~~wt~~e~Lv-vV~~dG~v~vy~~~G  110 (410)
T PF04841_consen   63 IQIYSSS-GKLLSSIPWDS-GRIVGMGWTDDEELV-VVQSDGTVRVYDLFG  110 (410)
T ss_pred             EEEECCC-CCEeEEEEECC-CCEEEEEECCCCeEE-EEEcCCEEEEEeCCC
Confidence            4566644 6666665  34 789999998865554 556899999999853

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.31  E-value=0.013  Score=35.56  Aligned_cols=114  Identities=15%  Similarity=0.163  Sum_probs=69.8

Q ss_pred             cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCeEEeecc-ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC--
Q psy15612         16 DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDKYQLHLH-ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG--   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~--   91 (131)
                      +....+..++|+|+.. ++++....+.|..++..+..+..+.-. ......+++..++.++++.-+++.+.++++...  
T Consensus        19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~   98 (248)
T PF06977_consen   19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTT   98 (248)
T ss_dssp             T--S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----T
T ss_pred             CccCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEecccc
Confidence            4455699999999866 455666777787778754434444322 356789999888888888878899998887321  


Q ss_pred             ce-----E-Eec----CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         92 AS-----I-FQS----KESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        92 ~~-----~-~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ..     . ...    ..+...-.++|+|.++.++.+-+..-..++.+
T Consensus        99 ~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~  146 (248)
T PF06977_consen   99 SLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEV  146 (248)
T ss_dssp             T--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred             ccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEE
Confidence            11     1 111    24456899999998777777665555666654

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=97.25  E-value=0.03  Score=38.50  Aligned_cols=105  Identities=10%  Similarity=0.037  Sum_probs=68.0

Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEc--cCCCEEEEeCCCCeEEEeeCC-----CCc
Q psy15612         22 FSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFA--ACGKWFVSTGKDNLLNAWRTP-----YGA   92 (131)
Q Consensus        22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~--~~~~~~~~~~~~~~i~~w~~~-----~~~   92 (131)
                      .-+.-+.-++.-++-.....+.|||...+.....  ......|.++.|.  |+|+.+++.+..+.|.++.-.     +..
T Consensus        33 ~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~  112 (631)
T PF12234_consen   33 SLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKG  112 (631)
T ss_pred             ceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCC
Confidence            3344444444444444456799999998875322  2446789999986  689999999999998888532     111


Q ss_pred             e----E---EecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         93 S----I---FQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        93 ~----~---~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +    +   -... .+.+|....|.++|.+++.++  .++.|+|
T Consensus       113 p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~d  154 (631)
T PF12234_consen  113 PSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFD  154 (631)
T ss_pred             cccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEEC
Confidence            1    1   1122 347788999999998776543  3566654

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG2114|consensus

Probab=97.21  E-value=0.011  Score=41.41  Aligned_cols=105  Identities=19%  Similarity=0.214  Sum_probs=70.6

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCC-CEEEEeCCCC-----eEEEeeCCCC-----
Q psy15612         23 SLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACG-KWFVSTGKDN-----LLNAWRTPYG-----   91 (131)
Q Consensus        23 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~-----~i~~w~~~~~-----   91 (131)
                      .-.+++.+..++.|+.+|.|.+.+-.-.....+..++..+...-+.-++ ..+++.+.|.     .+++|++...     
T Consensus        28 isc~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s  107 (933)
T KOG2114|consen   28 ISCCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS  107 (933)
T ss_pred             eeEEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence            3456888999999999999888776554445566665553333344444 4566655543     4899997632     


Q ss_pred             -ceE---Eec----C-CCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         92 -ASI---FQS----K-ESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        92 -~~~---~~~----~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                       .+.   ...    + .+.++.+++.+.+-+.++.|-.+|.|..+
T Consensus       108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~  152 (933)
T KOG2114|consen  108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICY  152 (933)
T ss_pred             cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEE
Confidence             112   111    1 35678899999998899999999988765

>KOG1008|consensus

Probab=97.21  E-value=7e-05  Score=50.05  Aligned_cols=112  Identities=16%  Similarity=0.156  Sum_probs=78.8

Q ss_pred             CCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEcc-CCCEEEEeC----CCCeEEEeeC
Q psy15612         19 SQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAA-CGKWFVSTG----KDNLLNAWRT   88 (131)
Q Consensus        19 ~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~-~~~~~~~~~----~~~~i~~w~~   88 (131)
                      ..+.++++.-  +...++.|..+|.|.+-..+...-   ....++.....+++|++ |.+.++.|-    .|..+.+||+
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi  136 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI  136 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence            3456666654  345678888999999988875542   34566778889999998 556666652    2456999998


Q ss_pred             CCC--ceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         89 PYG--ASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        89 ~~~--~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .++  .+.    +..+......+++|..+.+++.+|...+.++++|+|
T Consensus       137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlR  184 (783)
T KOG1008|consen  137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLR  184 (783)
T ss_pred             ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhh
Confidence            866  211    222344555688898888888888888899999886

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.21  E-value=0.0074  Score=42.34  Aligned_cols=69  Identities=19%  Similarity=0.303  Sum_probs=50.0

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      ......+++-+.+| .|++|+.+|.|++||-.+.+. ..+++-..+|..+..+.||++++..+. ..+.+++
T Consensus       576 ~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~  645 (794)
T PF08553_consen  576 SKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLID  645 (794)
T ss_pred             cCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEE
Confidence            33456666666555 778999999999999654333 345666789999999999999987764 4455555

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=97.19  E-value=0.0028  Score=27.34  Aligned_cols=30  Identities=10%  Similarity=0.269  Sum_probs=24.4

Q ss_pred             CCeEEEEECCCC---CEEEEecCCCcEEEEEee
Q psy15612        101 SSVLSCDISADD---KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       101 ~~v~~~~~~~~~---~~l~~~~~d~~i~vw~~~  130 (131)
                      +.+.++.|+|..   .+|+.+-..+.+.++|++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R   33 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR   33 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence            468899999854   477777778899999987

It contains a characteristic DLL sequence motif.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.06  E-value=0.036  Score=35.79  Aligned_cols=127  Identities=14%  Similarity=0.127  Sum_probs=60.2

Q ss_pred             EEEeCCC-Cceeeee---cCCCCeEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCCeEEeeccccceEEEEEccCCC
Q psy15612          2 YLQSVSP-GRQLQQH---DFSSQIFSLGYCPSGEWLAVGME-----NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK   72 (131)
Q Consensus         2 ~iwd~~~-~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~   72 (131)
                      |||-+.+ +.....+   ...+.+..--|.|||..+..-+.     +.-|.-+++.+.+...+...+ ....+--++||+
T Consensus       217 RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p-~~~H~~ss~Dg~  295 (386)
T PF14583_consen  217 RIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMP-WCSHFMSSPDGK  295 (386)
T ss_dssp             SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE--SEEEEEE-TTSS
T ss_pred             EEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCC-ceeeeEEcCCCC
Confidence            5675542 3333333   22334666778999998765322     234666777777654433222 233455578999


Q ss_pred             EEEEeCCCC----------------eEEEeeCCCCceEEecCC----------CC-CeEEEEECCCCCEEEEec-CCCcE
Q psy15612         73 WFVSTGKDN----------------LLNAWRTPYGASIFQSKE----------SS-SVLSCDISADDKYIVTGS-GDKKA  124 (131)
Q Consensus        73 ~~~~~~~~~----------------~i~~w~~~~~~~~~~~~~----------~~-~v~~~~~~~~~~~l~~~~-~d~~i  124 (131)
                      +++.=+.|.                -|++++...+....+..|          .. .=....|+||+++++..| ..|..
T Consensus       296 L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~  375 (386)
T PF14583_consen  296 LFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPP  375 (386)
T ss_dssp             EEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-
T ss_pred             EEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCc
Confidence            886433321                366788877665422111          11 125688999999876544 46776


Q ss_pred             EEEEe
Q psy15612        125 TVYEV  129 (131)
Q Consensus       125 ~vw~~  129 (131)
                      .||=+
T Consensus       376 ~vY~v  380 (386)
T PF14583_consen  376 AVYLV  380 (386)
T ss_dssp             EEEEE
T ss_pred             cEEEE
Confidence            66643

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.03  E-value=0.033  Score=35.01  Aligned_cols=110  Identities=13%  Similarity=0.003  Sum_probs=64.0

Q ss_pred             CCeEEEEECCCCCEEEEEeC-----------CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCCCeEEEe
Q psy15612         19 SQIFSLGYCPSGEWLAVGME-----------NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKDNLLNAW   86 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w   86 (131)
                      ...+.....|+|.+-+....           -+.++.++........+..+-.....++||||++.++.+ +..+.+.-+
T Consensus       111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~  190 (307)
T COG3386         111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY  190 (307)
T ss_pred             CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence            35677888888887665433           123444554333333344445566789999999887766 445777777


Q ss_pred             eCCC--C----ceE--EecCCCCCeEEEEECCCCCEEEEecCCC-cEEEEE
Q psy15612         87 RTPY--G----ASI--FQSKESSSVLSCDISADDKYIVTGSGDK-KATVYE  128 (131)
Q Consensus        87 ~~~~--~----~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~vw~  128 (131)
                      ++..  +    +..  ......+..-.++...+|++-+.+..++ .|..|+
T Consensus       191 ~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~  241 (307)
T COG3386         191 DLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN  241 (307)
T ss_pred             ecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence            6642  1    111  2222345555666777777664433333 666665

>KOG1832|consensus

Probab=96.96  E-value=0.0017  Score=45.78  Aligned_cols=75  Identities=11%  Similarity=0.134  Sum_probs=61.1

Q ss_pred             eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCC-C-cEEEEEe
Q psy15612         55 LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGD-K-KATVYEV  129 (131)
Q Consensus        55 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-~-~i~vw~~  129 (131)
                      +..+.....|++|+.+.++++.|+..|.+++++..+|... ....|.+.++.+.-+.+|..+.+.+.- . ...+|++
T Consensus      1097 frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~ 1174 (1516)
T KOG1832|consen 1097 FRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDA 1174 (1516)
T ss_pred             hhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcc
Confidence            4456778899999999999999999999999999999887 777899999999988898877655432 2 3455654

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=96.96  E-value=0.048  Score=35.58  Aligned_cols=72  Identities=17%  Similarity=0.179  Sum_probs=48.0

Q ss_pred             cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe---cC------CCCCeEEEEECC-----CC---CEEEEecC
Q psy15612         58 HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ---SK------ESSSVLSCDISA-----DD---KYIVTGSG  120 (131)
Q Consensus        58 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~---~~------~~~~v~~~~~~~-----~~---~~l~~~~~  120 (131)
                      ..+.|..++.| |--+++.+..+|.+.+.|++....++.   ..      ....+.++.|+.     |+   -.+++|..
T Consensus        85 ~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn  163 (395)
T PF08596_consen   85 KQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN  163 (395)
T ss_dssp             -S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred             cCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence            45778888887 455788888999999999997777632   11      245677888752     33   35677778


Q ss_pred             CCcEEEEEee
Q psy15612        121 DKKATVYEVI  130 (131)
Q Consensus       121 d~~i~vw~~~  130 (131)
                      .|.+.+|.+.
T Consensus       164 ~G~v~~fkIl  173 (395)
T PF08596_consen  164 SGNVLTFKIL  173 (395)
T ss_dssp             TSEEEEEEEE
T ss_pred             CCCEEEEEEe
Confidence            8999888763

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=96.96  E-value=0.028  Score=33.54  Aligned_cols=62  Identities=21%  Similarity=0.444  Sum_probs=46.8

Q ss_pred             EccCCCEEEEeCCCCeEEEeeCCCCceEEe--------c-------CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         67 FAACGKWFVSTGKDNLLNAWRTPYGASIFQ--------S-------KESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        67 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~--------~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +..+++++++.+.+|.+++||+.+++....        .       .....|..+.++.+|.-+++-+ +|....|+.
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~   94 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSP   94 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecc
Confidence            445688899999999999999998877521        1       3557788899998888777655 466777764

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.95  E-value=0.032  Score=38.35  Aligned_cols=86  Identities=15%  Similarity=0.164  Sum_probs=59.4

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEE--CCCCCEEEEEeCCCcEEEEeCCC-------CC---eEE--eeccc-cceE
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGY--CPSGEWLAVGMENSNVEVLHALK-------PD---KYQ--LHLHE-SCVL   63 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~--~~~~~~l~~~~~~~~v~~~~~~~-------~~---~~~--~~~~~-~~v~   63 (131)
                      +.|||.+.+.....-  ...+.|..+.|  .|+++.+++.+..+.|.++.-..       +.   +..  +..++ .+|.
T Consensus        53 LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Ig  132 (631)
T PF12234_consen   53 LTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIG  132 (631)
T ss_pred             EEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCcc
Confidence            469999988755433  45788999999  57899888888888898875421       11   122  23333 5688


Q ss_pred             EEEEccCCCEEEEeCCCCeEEEeeC
Q psy15612         64 SLRFAACGKWFVSTGKDNLLNAWRT   88 (131)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~i~~w~~   88 (131)
                      +..|-++|..++.+  ++.+.++|-
T Consensus       133 ds~Wl~~G~LvV~s--GNqlfv~dk  155 (631)
T PF12234_consen  133 DSIWLKDGTLVVGS--GNQLFVFDK  155 (631)
T ss_pred             ceeEecCCeEEEEe--CCEEEEECC
Confidence            99999999876655  456777763

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=96.83  E-value=0.062  Score=34.92  Aligned_cols=95  Identities=13%  Similarity=0.054  Sum_probs=54.9

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC--CCCCeEEEE
Q psy15612         30 GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCD  107 (131)
Q Consensus        30 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~--~~~~v~~~~  107 (131)
                      +..++.++.++.+..+|..+++..-..... ....+.  ..+..++.++.++.+..+|..+|+.+....  ......+..
T Consensus       256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~  332 (394)
T PRK11138        256 GGVVYALAYNGNLVALDLRSGQIVWKREYG-SVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPV  332 (394)
T ss_pred             CCEEEEEEcCCeEEEEECCCCCEEEeecCC-CccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCE
Confidence            445666777889999999888752111111 111121  246677778889999999999998762211  111111111


Q ss_pred             ECCCCCEEEEecCCCcEEEEEe
Q psy15612        108 ISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       108 ~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .  .+..++.++.+|.+...|.
T Consensus       333 v--~~g~l~v~~~~G~l~~ld~  352 (394)
T PRK11138        333 L--YNGYLVVGDSEGYLHWINR  352 (394)
T ss_pred             E--ECCEEEEEeCCCEEEEEEC
Confidence            1  2445566667777766654

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.77  E-value=0.052  Score=33.16  Aligned_cols=105  Identities=14%  Similarity=0.088  Sum_probs=64.2

Q ss_pred             CeEEEEECCCCCEEEEEe---CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEee-CCCCceE-
Q psy15612         20 QIFSLGYCPSGEWLAVGM---ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR-TPYGASI-   94 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~---~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~-~~~~~~~-   94 (131)
                      .+.+.+++++++.++...   ....+.++..........  ....+..-.|++++........+....++. ..+++.. 
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~--~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~  102 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL--TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP  102 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec--cCCccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence            688999999999887655   233344444433222222  223667788999988777766666656653 3333332 


Q ss_pred             -Ee-cC-CCCCeEEEEECCCCCEEEEec---CCCcEEE
Q psy15612         95 -FQ-SK-ESSSVLSCDISADDKYIVTGS---GDKKATV  126 (131)
Q Consensus        95 -~~-~~-~~~~v~~~~~~~~~~~l~~~~---~d~~i~v  126 (131)
                       .. .. ..+.|..+.+||||..++...   .++++.+
T Consensus       103 ~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~v  140 (253)
T PF10647_consen  103 VEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYV  140 (253)
T ss_pred             EEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEE
Confidence             11 11 122899999999999876544   2355554

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.73  E-value=0.06  Score=33.47  Aligned_cols=112  Identities=13%  Similarity=0.136  Sum_probs=69.7

Q ss_pred             CCceeeeecCCCCeEEEEECCCCC-EEEEEeCCCc-EEEEeCCCCCe-EEeeccccc--eEEEEEccCCCEEEEeCC---
Q psy15612          8 PGRQLQQHDFSSQIFSLGYCPSGE-WLAVGMENSN-VEVLHALKPDK-YQLHLHESC--VLSLRFAACGKWFVSTGK---   79 (131)
Q Consensus         8 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~-v~~~~~~~~~~-~~~~~~~~~--v~~~~~~~~~~~~~~~~~---   79 (131)
                      .|+++.......+.-.+.++|.-. -++.+-.-|+ ..++|..+.+. ..+...+..  --.=.|||||.+++..-.   
T Consensus        57 aGk~v~~~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd  136 (366)
T COG3490          57 AGKIVFATALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFD  136 (366)
T ss_pred             CCceeeeeecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCC
Confidence            355555554555556677777533 4555544444 55778876653 222222221  112458999999987643   


Q ss_pred             --CCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEec
Q psy15612         80 --DNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        80 --~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                        .+.|-+||.+.+-..  ....++-....+.+.+||+.++.+.
T Consensus       137 ~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan  180 (366)
T COG3490         137 PNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN  180 (366)
T ss_pred             CCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence              356889998744332  4445777788999999999988764

>KOG2079|consensus

Probab=96.73  E-value=0.02  Score=41.30  Aligned_cols=67  Identities=12%  Similarity=0.196  Sum_probs=50.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeecccc---ceEEEEEccCCCEEEEeCCCCe
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHES---CVLSLRFAACGKWFVSTGKDNL   82 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~   82 (131)
                      ..+++|.+++|+.+|..++.|-.+|.|.+||...++. +.+..+..   .+..+.+..+++.++++...|.
T Consensus       128 ~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  128 RVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             ccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence            3557899999999999999999999999999988765 33443333   3555666666777778777775

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.63  E-value=0.073  Score=33.12  Aligned_cols=116  Identities=14%  Similarity=0.054  Sum_probs=71.0

Q ss_pred             EEEeCCCCceeeee-cCCCC--eEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCC--eEEeeccccceEEEEEccCC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQ--IFSLGYCPSGEWLAVGMEN-----SNVEVLHALKPD--KYQLHLHESCVLSLRFAACG   71 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~--v~~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~   71 (131)
                      .++|..+.+...++ ..+++  --.=.|||||.+|....+|     |-|-+||.+.+-  ..++..|.-....+.+.+||
T Consensus        94 ~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DG  173 (366)
T COG3490          94 MVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADG  173 (366)
T ss_pred             EEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCC
Confidence            35666655555444 22221  1123579999998776443     558899987433  34567777788899999999


Q ss_pred             CEEEEeCCC------------------CeEEEeeCCCCceE--Eec---CCCCCeEEEEECCCCCEEEE
Q psy15612         72 KWFVSTGKD------------------NLLNAWRTPYGASI--FQS---KESSSVLSCDISADDKYIVT  117 (131)
Q Consensus        72 ~~~~~~~~~------------------~~i~~w~~~~~~~~--~~~---~~~~~v~~~~~~~~~~~l~~  117 (131)
                      +.++.+...                  ..+.+.|..+|..+  ...   .+.-.+..++..++|+..+.
T Consensus       174 rtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfg  242 (366)
T COG3490         174 RTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFG  242 (366)
T ss_pred             cEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEE
Confidence            998876431                  12444455556554  111   23456778888888775543

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=96.62  E-value=0.069  Score=32.76  Aligned_cols=62  Identities=19%  Similarity=0.209  Sum_probs=43.0

Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612         28 PSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        28 ~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      ..++.|+.|..+| +.+++..... ...+ .....|..+...|+-+.++.-+ |+.+.++++..-.
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i-~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~   67 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRI-LKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLE   67 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeE-eecceEEEEEEecccCEEEEEc-CCccEEEEchhhc
Confidence            3578899998888 8989983332 2222 2233489999998877766655 5889999876433

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.61  E-value=0.12  Score=36.37  Aligned_cols=73  Identities=16%  Similarity=0.184  Sum_probs=52.2

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCC----------CC----eEEe--------eccccceEEEEEccC---CCEE
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALK----------PD----KYQL--------HLHESCVLSLRFAAC---GKWF   74 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~----------~~----~~~~--------~~~~~~v~~~~~~~~---~~~~   74 (131)
                      .|..+.++|+|..++..+..+ |.+..+..          ++    ++.+        ......|..+.|+|.   +..+
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l  164 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL  164 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence            578899999999998887755 55555431          11    1221        123457889999995   5888


Q ss_pred             EEeCCCCeEEEeeCCCCce
Q psy15612         75 VSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~   93 (131)
                      +.-..|+.+++||+.....
T Consensus       165 ~vLtsdn~lR~y~~~~~~~  183 (717)
T PF10168_consen  165 VVLTSDNTLRLYDISDPQH  183 (717)
T ss_pred             EEEecCCEEEEEecCCCCC
Confidence            8888899999999875443

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.60  E-value=0.14  Score=36.07  Aligned_cols=72  Identities=14%  Similarity=0.112  Sum_probs=49.4

Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCC---------CCceE--E----------ecCCCCCeEEEEECCC---CCE
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTP---------YGASI--F----------QSKESSSVLSCDISAD---DKY  114 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~---------~~~~~--~----------~~~~~~~v~~~~~~~~---~~~  114 (131)
                      ...|..+..+|+|+.++..+..+...+.=.+         .|+..  .          .......|..+.|+|.   +..
T Consensus        84 ~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   84 LFEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             ceeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence            3468889999999999988876643322111         11211  0          1134567899999996   477


Q ss_pred             EEEecCCCcEEEEEee
Q psy15612        115 IVTGSGDKKATVYEVI  130 (131)
Q Consensus       115 l~~~~~d~~i~vw~~~  130 (131)
                      |+.-..|+.+++||+.
T Consensus       164 l~vLtsdn~lR~y~~~  179 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDIS  179 (717)
T ss_pred             EEEEecCCEEEEEecC
Confidence            8888889999999973

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.57  E-value=0.086  Score=33.13  Aligned_cols=70  Identities=10%  Similarity=0.190  Sum_probs=42.1

Q ss_pred             eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612         56 HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATV  126 (131)
Q Consensus        56 ~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  126 (131)
                      ....+.+..+.-++||++++++++.+...-||....... +......++..+.|+|++.+.+.+ ..+.++.
T Consensus       141 ~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~  211 (302)
T PF14870_consen  141 SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQF  211 (302)
T ss_dssp             -S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEE
T ss_pred             cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEE
Confidence            444567888888999999999988877778887544444 555567899999999998876654 5555554

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=96.55  E-value=0.017  Score=24.92  Aligned_cols=31  Identities=13%  Similarity=0.208  Sum_probs=25.5

Q ss_pred             CCeEEEEECCCCC---EEEEEeCCCcEEEEeCCC
Q psy15612         19 SQIFSLGYCPSGE---WLAVGMENSNVEVLHALK   49 (131)
Q Consensus        19 ~~v~~~~~~~~~~---~l~~~~~~~~v~~~~~~~   49 (131)
                      +.+.+++|+|++.   +|+.+...+.+.++|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            3578999998544   788888889999999985

It contains a characteristic DLL sequence motif.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.52  E-value=0.09  Score=32.75  Aligned_cols=114  Identities=12%  Similarity=0.136  Sum_probs=74.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeec-cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHL-HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~   93 (131)
                      +....+.++.|+|+.+.|++..+.....++=...+. +..++- .-.....+.+..++++.++--+++.+.++.+.....
T Consensus        83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~  162 (316)
T COG3204          83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTT  162 (316)
T ss_pred             cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCcc
Confidence            344569999999999998887776655555444454 344321 123455788888888888888888888887664422


Q ss_pred             E-------Eec---CC-CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         94 I-------FQS---KE-SSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        94 ~-------~~~---~~-~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .       ...   .+ +...-.++|+|..+.+..+-+-.-+.++.+
T Consensus       163 ~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~  209 (316)
T COG3204         163 VISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEV  209 (316)
T ss_pred             EEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEE
Confidence            2       011   12 455678999998887777665555666544

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=96.42  E-value=0.13  Score=33.42  Aligned_cols=112  Identities=9%  Similarity=-0.027  Sum_probs=54.8

Q ss_pred             eCCCCceeeeec-CCCCeE-----EEEECCCCCEEEEEeC-C--CcEEEEeCCCCCeEEeecccc-ceEEEEEccCCCEE
Q psy15612          5 SVSPGRQLQQHD-FSSQIF-----SLGYCPSGEWLAVGME-N--SNVEVLHALKPDKYQLHLHES-CVLSLRFAACGKWF   74 (131)
Q Consensus         5 d~~~~~~~~~~~-~~~~v~-----~~~~~~~~~~l~~~~~-~--~~v~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~   74 (131)
                      |..||..+..+. .....-     .-+|.++|+.|+.++. +  ..+.+.|+.+++..++..... ......++|+.+.+
T Consensus        16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~   95 (386)
T PF14583_consen   16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRAL   95 (386)
T ss_dssp             -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEE
T ss_pred             CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeE
Confidence            667777776663 222222     2345678877665544 3  457777899999877765432 23356678888887


Q ss_pred             EEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEE--CCCCCEEE
Q psy15612         75 VSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDI--SADDKYIV  116 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~--~~~~~~l~  116 (131)
                      +-......+.-.|+.+.+.. ........+....|  +.+++.++
T Consensus        96 ~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~  140 (386)
T PF14583_consen   96 YYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLV  140 (386)
T ss_dssp             EEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEE
T ss_pred             EEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEE
Confidence            65545567888899988775 33334444444444  34556554

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.39  E-value=0.14  Score=33.51  Aligned_cols=90  Identities=11%  Similarity=0.145  Sum_probs=54.7

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCC-----------cEEEEeCCCCCe---EEeeccc-cc-eE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENS-----------NVEVLHALKPDK---YQLHLHE-SC-VL   63 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~-----------~v~~~~~~~~~~---~~~~~~~-~~-v~   63 (131)
                      |++.|+++++.+... .... ...+.|.++++.++....+.           .|..|.+.+...   ..+.... .. ..
T Consensus       152 l~v~Dl~tg~~l~d~i~~~~-~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~  230 (414)
T PF02897_consen  152 LRVFDLETGKFLPDGIENPK-FSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFV  230 (414)
T ss_dssp             EEEEETTTTEEEEEEEEEEE-SEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEE
T ss_pred             EEEEECCCCcCcCCcccccc-cceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEE
Confidence            578899999776533 2211 22399999988876654332           377788876653   2222322 22 56


Q ss_pred             EEEEccCCCEEEEe---CCC-CeEEEeeCCCC
Q psy15612         64 SLRFAACGKWFVST---GKD-NLLNAWRTPYG   91 (131)
Q Consensus        64 ~~~~~~~~~~~~~~---~~~-~~i~~w~~~~~   91 (131)
                      .+..++|+++++..   +.+ ..+.+.+...+
T Consensus       231 ~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~  262 (414)
T PF02897_consen  231 SVSRSKDGRYLFISSSSGTSESEVYLLDLDDG  262 (414)
T ss_dssp             EEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred             EEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence            88899999987643   222 45777788764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG2377|consensus

Probab=96.32  E-value=0.16  Score=33.80  Aligned_cols=98  Identities=10%  Similarity=0.087  Sum_probs=64.3

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-----EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-----YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      ..++|.++.|++|.+.++.--.+.+|.+++....+.     .+.......|..+.|+.+ +-++... +..+.+|.....
T Consensus        65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~-~~G~e~y~v~pe  142 (657)
T KOG2377|consen   65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFIT-DQGIEFYQVLPE  142 (657)
T ss_pred             CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEe-cCCeEEEEEchh
Confidence            456899999999999999998999999998854332     222334456889999865 3344333 223455554332


Q ss_pred             ce--EEecCCCCCeEEEEECCCCCEEE
Q psy15612         92 AS--IFQSKESSSVLSCDISADDKYIV  116 (131)
Q Consensus        92 ~~--~~~~~~~~~v~~~~~~~~~~~l~  116 (131)
                      +.  ...+.+...|.-..|.++.+.+.
T Consensus       143 krslRlVks~~~nvnWy~yc~et~v~L  169 (657)
T KOG2377|consen  143 KRSLRLVKSHNLNVNWYMYCPETAVIL  169 (657)
T ss_pred             hhhhhhhhhcccCccEEEEccccceEe
Confidence            22  24455677777777888776543

>PRK10115 protease 2; Provisional

Probab=96.26  E-value=0.24  Score=34.90  Aligned_cols=105  Identities=11%  Similarity=0.065  Sum_probs=61.3

Q ss_pred             eEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEeCC------CCeEEEee
Q psy15612         21 IFSLGYCPSGEWLAVGME-----NSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVSTGK------DNLLNAWR   87 (131)
Q Consensus        21 v~~~~~~~~~~~l~~~~~-----~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~------~~~i~~w~   87 (131)
                      +..+.++|++++|+.+..     ...+.+.|+.++..  ..+....   ..+.|.+|++.|+....      ...++.++
T Consensus       129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~---~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~  205 (686)
T PRK10115        129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE---PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT  205 (686)
T ss_pred             EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc---eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence            677889999998876532     33588888887762  2222211   46999999987665432      23577778


Q ss_pred             CCCCc--eE-EecCCCCCeE-EEEECCCCCEEEEecC---CCcEEEEE
Q psy15612         88 TPYGA--SI-FQSKESSSVL-SCDISADDKYIVTGSG---DKKATVYE  128 (131)
Q Consensus        88 ~~~~~--~~-~~~~~~~~v~-~~~~~~~~~~l~~~~~---d~~i~vw~  128 (131)
                      +.++.  -. .......... ....+.++++++..+.   ++.+.+++
T Consensus       206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~  253 (686)
T PRK10115        206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLD  253 (686)
T ss_pred             CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEE
Confidence            88773  22 2222222222 3334447776654332   34566665

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.19  E-value=0.072  Score=28.19  Aligned_cols=64  Identities=14%  Similarity=0.132  Sum_probs=43.2

Q ss_pred             eEEEEEcc---CC-CEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         62 VLSLRFAA---CG-KWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        62 v~~~~~~~---~~-~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      |.++++..   || +-|+.++.|..|++|+-.  +.+....-.+.+.+++-...+ .++-+-.+|+|-+|+
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~v~~L~~~~~~-~F~Y~l~NGTVGvY~   69 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITETDKVTSLCSLGGG-RFAYALANGTVGVYD   69 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecccceEEEEEcCCC-EEEEEecCCEEEEEe
Confidence            34555443   44 468899999999999843  444555566778888776664 466666777777765

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=96.09  E-value=0.14  Score=30.64  Aligned_cols=75  Identities=16%  Similarity=0.128  Sum_probs=52.6

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE--E------ee-------ccccceEEEEEccCCCEEEEeCCCC
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY--Q------LH-------LHESCVLSLRFAACGKWFVSTGKDN   81 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~--~------~~-------~~~~~v~~~~~~~~~~~~~~~~~~~   81 (131)
                      ...++..+.  ..+.++++...+|.+++||+.+.+..  .      +.       .....|..+.++.+|.-+++-+ ++
T Consensus        11 Lgs~~~~l~--~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng   87 (219)
T PF07569_consen   11 LGSPVSFLE--CNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NG   87 (219)
T ss_pred             cCCceEEEE--eCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CC
Confidence            344455554  46788888899999999999887631  1      11       2445678888898898877665 46


Q ss_pred             eEEEeeCCCCceE
Q psy15612         82 LLNAWRTPYGASI   94 (131)
Q Consensus        82 ~i~~w~~~~~~~~   94 (131)
                      ..+.|+..-+..+
T Consensus        88 ~~y~y~~~L~~W~  100 (219)
T PF07569_consen   88 DSYSYSPDLGCWI  100 (219)
T ss_pred             CEEEeccccceeE
Confidence            7788887655554

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG4499|consensus

Probab=95.99  E-value=0.17  Score=30.73  Aligned_cols=91  Identities=12%  Similarity=0.117  Sum_probs=59.7

Q ss_pred             CeEEEEECCCCCEEE-EEeCCCcEEEEe--CCCCCe------EEeec----cccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612         20 QIFSLGYCPSGEWLA-VGMENSNVEVLH--ALKPDK------YQLHL----HESCVLSLRFAACGKWFVSTGKDNLLNAW   86 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~-~~~~~~~v~~~~--~~~~~~------~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~i~~w   86 (131)
                      --+.++|+.+.+.+. +-+.+.+|.-||  ..++..      ..+..    .+...-.++..-+|+..++.-..+++...
T Consensus       159 IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~  238 (310)
T KOG4499|consen  159 ISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKV  238 (310)
T ss_pred             CCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEE
Confidence            346788887766554 455667776677  555442      11111    11223345556678887777778899999


Q ss_pred             eCCCCceE-EecCCCCCeEEEEECC
Q psy15612         87 RTPYGASI-FQSKESSSVLSCDISA  110 (131)
Q Consensus        87 ~~~~~~~~-~~~~~~~~v~~~~~~~  110 (131)
                      |..+|+.+ ..+-....+++++|-.
T Consensus       239 dp~tGK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  239 DPTTGKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             CCCCCcEEEEEEcCCCceEEEEecC
Confidence            99999998 4444678899999963

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.93  E-value=0.21  Score=31.44  Aligned_cols=104  Identities=11%  Similarity=0.112  Sum_probs=56.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEccCCCEEEEeCCCCeEEEeeC-CCCce
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT-PYGAS   93 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~-~~~~~   93 (131)
                      +..+.+..+.-+++|++++++.......-|+.....-.. -......+..+.|+|++...+.+ +.+.++.=+. ...+.
T Consensus       142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~  220 (302)
T PF14870_consen  142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGET  220 (302)
T ss_dssp             S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEE
T ss_pred             CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccc
Confidence            344668888889999988887665555667765433222 23346789999999998876655 7787777662 22222


Q ss_pred             E-E----ecCCCCCeEEEEECCCCCEEEEecC
Q psy15612         94 I-F----QSKESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        94 ~-~----~~~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      - .    .......+..++|.+++...++++.
T Consensus       221 w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~  252 (302)
T PF14870_consen  221 WSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS  252 (302)
T ss_dssp             E---B-TTSS--S-EEEEEESSSS-EEEEEST
T ss_pred             cccccCCcccCceeeEEEEecCCCCEEEEeCC
Confidence            1 1    1123445889999998877776654

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.90  E-value=0.37  Score=33.98  Aligned_cols=109  Identities=8%  Similarity=0.037  Sum_probs=71.8

Q ss_pred             eEEEEECC--CCCEEEEEeCCCcEEEEeCCC-------C---------C----eEEeeccccceEEEEEc--cCCCEEEE
Q psy15612         21 IFSLGYCP--SGEWLAVGMENSNVEVLHALK-------P---------D----KYQLHLHESCVLSLRFA--ACGKWFVS   76 (131)
Q Consensus        21 v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~-------~---------~----~~~~~~~~~~v~~~~~~--~~~~~~~~   76 (131)
                      |+.+....  +...|+.+..||.|.+|..+.       .         .    .............++++  ...++||+
T Consensus       103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAV  182 (717)
T PF08728_consen  103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAV  182 (717)
T ss_pred             eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEE
Confidence            44454432  345678889999999996521       0         0    01112234567788888  77888888


Q ss_pred             eCCCCeEEEeeCCCC--ceE--EecCCCCCeEEEEECCCC-----C-EEEEecCCCcEEEEEe
Q psy15612         77 TGKDNLLNAWRTPYG--ASI--FQSKESSSVLSCDISADD-----K-YIVTGSGDKKATVYEV  129 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~--~~~--~~~~~~~~v~~~~~~~~~-----~-~l~~~~~d~~i~vw~~  129 (131)
                      ++....|.+|-....  +..  ....+...|.+++|-++.     . ++++++-.|.+.+|++
T Consensus       183 SsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  183 SSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            888888888755432  222  223467888999997643     2 6778888999998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG3630|consensus

Probab=95.86  E-value=0.058  Score=39.44  Aligned_cols=109  Identities=13%  Similarity=-0.066  Sum_probs=70.5

Q ss_pred             CeEEEEECCCCCEEEE--EeCCCcEEEEeCCCCCe------E------EeeccccceEEEEEccCCC-EEEEeCCCCeEE
Q psy15612         20 QIFSLGYCPSGEWLAV--GMENSNVEVLHALKPDK------Y------QLHLHESCVLSLRFAACGK-WFVSTGKDNLLN   84 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~--~~~~~~v~~~~~~~~~~------~------~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~   84 (131)
                      .+..+...+|+...++  ..++..|..||++.-..      .      ..........++.|+|.-. ..+....|+.|.
T Consensus       102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~  181 (1405)
T KOG3630|consen  102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR  181 (1405)
T ss_pred             cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence            4556666777665544  33444688899875331      0      1112234566888988533 356667788888


Q ss_pred             EeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         85 AWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        85 ~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +..+...... .........++++|+|.|+.++.|-..|++.-|.
T Consensus       182 V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~  226 (1405)
T KOG3630|consen  182 VKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYE  226 (1405)
T ss_pred             hhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEee
Confidence            7765433222 2235567789999999999999999888877654

>KOG4441|consensus

Probab=95.84  E-value=0.36  Score=33.32  Aligned_cols=120  Identities=13%  Similarity=0.043  Sum_probs=61.5

Q ss_pred             EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCeEEeeccccceEEEEEc-cCCC
Q psy15612          2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMEN------SNVEVLHALKPDKYQLHLHESCVLSLRFA-ACGK   72 (131)
Q Consensus         2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~   72 (131)
                      ..||..+++.....  .....-.+++.. ++...++|+.+      ..+..||..+.+-..+..-...-...... -+|.
T Consensus       304 e~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~  382 (571)
T KOG4441|consen  304 ECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGK  382 (571)
T ss_pred             EEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCE
Confidence            45666655433322  222222223322 45677788887      34778888777643322211111111111 2577


Q ss_pred             EEEEeCCCCe-----EEEeeCCCCceEEecCCCCCeEEEEE-CCCCCEEEEecCCC
Q psy15612         73 WFVSTGKDNL-----LNAWRTPYGASIFQSKESSSVLSCDI-SADDKYIVTGSGDK  122 (131)
Q Consensus        73 ~~~~~~~~~~-----i~~w~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~  122 (131)
                      ..+.|+.|+.     +-.||..+.+..............+. .-+|+..+.|+.++
T Consensus       383 iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~  438 (571)
T KOG4441|consen  383 LYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDG  438 (571)
T ss_pred             EEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCC
Confidence            7788888864     77788877766533332222222222 22566667777554

>KOG1897|consensus

Probab=95.84  E-value=0.47  Score=34.57  Aligned_cols=125  Identities=14%  Similarity=0.187  Sum_probs=76.1

Q ss_pred             CEEEeCCCCceeeeec--CCC---CeEEEEECCC-CCEEEEEeC----------CCcEEEEeCCC-CCeEEee--ccccc
Q psy15612          1 MYLQSVSPGRQLQQHD--FSS---QIFSLGYCPS-GEWLAVGME----------NSNVEVLHALK-PDKYQLH--LHESC   61 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~--~~~---~v~~~~~~~~-~~~l~~~~~----------~~~v~~~~~~~-~~~~~~~--~~~~~   61 (131)
                      ++++|-.|.+.+...+  ..+   .+.+..|..| +.+++.|..          .|.+.+|.... +++..+.  .-++.
T Consensus       752 l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Ga  831 (1096)
T KOG1897|consen  752 LRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGA  831 (1096)
T ss_pred             EEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccc
Confidence            4677877777766552  223   3555568777 556666532          46677777765 3333322  23455


Q ss_pred             eEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         62 VLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        62 v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +..+..- +|++++.  -+..+++|++.+++.+ ....+...+..+...-.|..++.|.--+.+.+..
T Consensus       832 v~aL~~f-ngkllA~--In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~  896 (1096)
T KOG1897|consen  832 VYALVEF-NGKLLAG--INQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQ  896 (1096)
T ss_pred             eeehhhh-CCeEEEe--cCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEE
Confidence            5555432 4665543  4557999999888666 4445566666777777778888877666665543

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=95.81  E-value=0.34  Score=32.86  Aligned_cols=122  Identities=11%  Similarity=0.154  Sum_probs=70.1

Q ss_pred             eCCCCceeeeecCCCCeEEEEECCCCC-------EEEEEeCCCcEEEEeCC--CCCeEEeeccccceEEEEE----ccCC
Q psy15612          5 SVSPGRQLQQHDFSSQIFSLGYCPSGE-------WLAVGMENSNVEVLHAL--KPDKYQLHLHESCVLSLRF----AACG   71 (131)
Q Consensus         5 d~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~~~~v~~~~~~--~~~~~~~~~~~~~v~~~~~----~~~~   71 (131)
                      |++-|+.+........+ -+.+.|..+       .-+.|-.+..|.-.|.+  +.++. ....+.....=.|    .-..
T Consensus       496 DIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~-v~esKdY~tKn~Fss~~tTes  573 (776)
T COG5167         496 DIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIK-VVESKDYKTKNKFSSGMTTES  573 (776)
T ss_pred             ecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeecccceEEecccccCCcee-eeeehhccccccccccccccC
Confidence            45556666555444444 566666422       12334445556555654  22221 1111111111122    2234


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      -+++.+++.|.|++||--.-+.. .+.+.+..|..+..+.+|++++..+.. .+.+-|+
T Consensus       574 GyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~  631 (776)
T COG5167         574 GYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDV  631 (776)
T ss_pred             ceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEec
Confidence            57899999999999995433222 556678899999999999998877764 4555554

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=95.66  E-value=0.12  Score=26.32  Aligned_cols=40  Identities=3%  Similarity=-0.099  Sum_probs=28.8

Q ss_pred             CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612         38 ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus        38 ~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      .+|.+..||..+++...+...-.....+++++|+..++.+
T Consensus        35 ~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~   74 (89)
T PF03088_consen   35 PTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVA   74 (89)
T ss_dssp             --EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEE
T ss_pred             CCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEE
Confidence            3577889999998876555445567899999999977655

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=95.64  E-value=0.058  Score=22.72  Aligned_cols=40  Identities=13%  Similarity=0.047  Sum_probs=25.2

Q ss_pred             cCCCEEEEeC-CCCeEEEeeCCCCceEEecCCCCCeEEEEE
Q psy15612         69 ACGKWFVSTG-KDNLLNAWRTPYGASIFQSKESSSVLSCDI  108 (131)
Q Consensus        69 ~~~~~~~~~~-~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~  108 (131)
                      |+++.++.+. .++.+.++|..+++.+.....+.....+.|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence            5677666554 477899999988877633333444444444

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=95.59  E-value=0.38  Score=31.78  Aligned_cols=79  Identities=14%  Similarity=0.136  Sum_probs=50.0

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeeccccc-eEEEEEccC-----------------CCE-EE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHESC-VLSLRFAAC-----------------GKW-FV   75 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~-v~~~~~~~~-----------------~~~-~~   75 (131)
                      +....+.++..+|++++.++.+.-|.|.++|+.+.... ..++.... +.-+.....                 ..+ ++
T Consensus       305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvI  384 (415)
T PF14655_consen  305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVI  384 (415)
T ss_pred             cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEE
Confidence            34456889999999999999999999999999887642 22322211 111111100                 111 23


Q ss_pred             EeCCCCeEEEeeCCCCceE
Q psy15612         76 STGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~   94 (131)
                      -+-+.+.+.+|++++|..+
T Consensus       385 yaprRg~lEvW~~~~g~Rv  403 (415)
T PF14655_consen  385 YAPRRGILEVWSMRQGPRV  403 (415)
T ss_pred             EeccCCeEEEEecCCCCEE
Confidence            3566788889998877766

>KOG2247|consensus

Probab=95.55  E-value=0.0013  Score=43.21  Aligned_cols=102  Identities=12%  Similarity=0.096  Sum_probs=70.3

Q ss_pred             cCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612         16 DFSSQIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~   93 (131)
                      ..++....++|..++..++ .+...+.+.+||+.+..-.++. +....-.-+.|++.+..++.+...+.+.+++..+.+.
T Consensus        72 n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~  151 (615)
T KOG2247|consen   72 NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRR  151 (615)
T ss_pred             CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccCcchHHHHhhccCCccccccccccceEEEeccchhh
Confidence            4455567788877766554 4566788999999765532221 1111112277888888888888889999999988777


Q ss_pred             EEe-cCCCCCeEEEEECCCCCEEEE
Q psy15612         94 IFQ-SKESSSVLSCDISADDKYIVT  117 (131)
Q Consensus        94 ~~~-~~~~~~v~~~~~~~~~~~l~~  117 (131)
                      ... ..|..++.++++.+.+..+..
T Consensus       152 iiv~Gkh~RRgtq~av~lEd~vil~  176 (615)
T KOG2247|consen  152 IIVMGKHQRRGTQIAVTLEDYVILC  176 (615)
T ss_pred             hhhhcccccceeEEEecccceeeec
Confidence            744 448888999999887665443

>PHA02713 hypothetical protein; Provisional

Probab=95.37  E-value=0.47  Score=32.64  Aligned_cols=85  Identities=8%  Similarity=-0.032  Sum_probs=43.4

Q ss_pred             cEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC------CeEEEeeCCC-CceEEecC---CCCCeEEEE
Q psy15612         41 NVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD------NLLNAWRTPY-GASIFQSK---ESSSVLSCD  107 (131)
Q Consensus        41 ~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~------~~i~~w~~~~-~~~~~~~~---~~~~v~~~~  107 (131)
                      .+..||..+.+-..+..   .......+  .-+++..+.|+.+      ..+..||..+ .+......   .......+.
T Consensus       433 ~ve~YDP~td~W~~v~~m~~~r~~~~~~--~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~  510 (557)
T PHA02713        433 KVIRYDTVNNIWETLPNFWTGTIRPGVV--SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL  510 (557)
T ss_pred             eEEEECCCCCeEeecCCCCcccccCcEE--EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE
Confidence            46778887765433221   11111122  2246666666653      2367899887 56652222   222222222


Q ss_pred             ECCCCCEEEEecCCC--cEEEEEe
Q psy15612        108 ISADDKYIVTGSGDK--KATVYEV  129 (131)
Q Consensus       108 ~~~~~~~l~~~~~d~--~i~vw~~  129 (131)
                      +  +++..++|+.++  .+-.||+
T Consensus       511 ~--~~~iyv~Gg~~~~~~~e~yd~  532 (557)
T PHA02713        511 H--DNTIMMLHCYESYMLQDTFNV  532 (557)
T ss_pred             E--CCEEEEEeeecceeehhhcCc
Confidence            2  677778888776  4444443

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=95.26  E-value=0.37  Score=29.61  Aligned_cols=124  Identities=11%  Similarity=-0.017  Sum_probs=66.3

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE---------------eeccccceEEEE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ---------------LHLHESCVLSLR   66 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~---------------~~~~~~~v~~~~   66 (131)
                      ++++...............|..+...|+-+.+++-+ |+.+.++++..-....               .......+..++
T Consensus        19 ~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~   97 (275)
T PF00780_consen   19 YVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFA   97 (275)
T ss_pred             EEEEecCCccceeEeecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEe
Confidence            455553222222332333489999988877766654 4899999986543211               111122333333


Q ss_pred             --EccCCCEEEEeCCCCeEEEeeCCCC-----ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         67 --FAACGKWFVSTGKDNLLNAWRTPYG-----ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        67 --~~~~~~~~~~~~~~~~i~~w~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                        -...+...+.....+.+.+|.+...     +.......+..+..++|.  ++.++.+..++ ..+.|+
T Consensus        98 ~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~~~-f~~idl  164 (275)
T PF00780_consen   98 VNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGTSKG-FYLIDL  164 (275)
T ss_pred             eccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEeCCc-eEEEec
Confidence              1123333344444558888876542     222444456888889987  45565554433 444443

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG1916|consensus

Probab=95.20  E-value=0.016  Score=41.19  Aligned_cols=66  Identities=11%  Similarity=0.160  Sum_probs=43.0

Q ss_pred             EEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEE-----------EEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612         24 LGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLS-----------LRFAACGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        24 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~-----------~~~~~~~~~~~~~~~~~~i~~w~~~   89 (131)
                      .-|-++...+.++..++++++..........+..|...+.+           -..||||..++.++.||.+.+|.+.
T Consensus       189 cp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  189 CPIAVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             cccccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence            33344566777788888888877654443222224333332           2368999999999999998888754

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=95.20  E-value=0.43  Score=30.06  Aligned_cols=108  Identities=14%  Similarity=0.107  Sum_probs=67.0

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      ....-+..++++  +++...+..+.-++++|+.+....+..+   -.+-.+++..  .|++...+..+..+.+.|+.+.+
T Consensus        84 ~~~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdps  159 (370)
T COG5276          84 NARDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPS  159 (370)
T ss_pred             ehhhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCC
Confidence            334445556664  4566666667779999998776433222   1234445544  59999998877778889988765


Q ss_pred             eEEe----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         93 SIFQ----SKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        93 ~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ...+    .........++.|  |++...+..|+-+++-|+
T Consensus       160 sP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDV  198 (370)
T COG5276         160 SPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDV  198 (370)
T ss_pred             CceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEc
Confidence            5422    2234444566665  555566666777777665

>PHA02713 hypothetical protein; Provisional

Probab=95.13  E-value=0.68  Score=31.91  Aligned_cols=64  Identities=14%  Similarity=-0.008  Sum_probs=36.6

Q ss_pred             CCCEEEEEeCCC-----cEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC--------------------
Q psy15612         29 SGEWLAVGMENS-----NVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD--------------------   80 (131)
Q Consensus        29 ~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~--------------------   80 (131)
                      +++..+.|+.++     .+..||..+..-..+..   .......+.  -+|+..+.|+.+                    
T Consensus       351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~  428 (557)
T PHA02713        351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT  428 (557)
T ss_pred             CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccc
Confidence            566677777643     47789988765433222   111111222  256666666654                    


Q ss_pred             ---CeEEEeeCCCCceE
Q psy15612         81 ---NLLNAWRTPYGASI   94 (131)
Q Consensus        81 ---~~i~~w~~~~~~~~   94 (131)
                         +.+..||..+.+..
T Consensus       429 ~~~~~ve~YDP~td~W~  445 (557)
T PHA02713        429 HSSNKVIRYDTVNNIWE  445 (557)
T ss_pred             cccceEEEECCCCCeEe
Confidence               24677888877665

>KOG2280|consensus

Probab=95.12  E-value=0.78  Score=32.54  Aligned_cols=48  Identities=17%  Similarity=0.303  Sum_probs=33.3

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD   51 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~   51 (131)
                      |+||+.. |+.+..+  .|. .+..+.|+.+..+| +...+|.+.+|++....
T Consensus        66 I~If~~s-G~lL~~~~w~~~-~lI~mgWs~~eeLI-~v~k~g~v~Vy~~~ge~  115 (829)
T KOG2280|consen   66 IRIFNIS-GQLLGRILWKHG-ELIGMGWSDDEELI-CVQKDGTVHVYGLLGEF  115 (829)
T ss_pred             EEEEecc-ccchHHHHhcCC-CeeeecccCCceEE-EEeccceEEEeecchhh
Confidence            3566644 6666554  343 78889999776554 55689999999986544

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=95.11  E-value=0.092  Score=21.83  Aligned_cols=31  Identities=13%  Similarity=0.106  Sum_probs=19.0

Q ss_pred             eccccceEEEEEccCCCEEEEeCC-C--CeEEEe
Q psy15612         56 HLHESCVLSLRFAACGKWFVSTGK-D--NLLNAW   86 (131)
Q Consensus        56 ~~~~~~v~~~~~~~~~~~~~~~~~-~--~~i~~w   86 (131)
                      ......-....|+|||+.|+.++. +  +...||
T Consensus         5 t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    5 TNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             S-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             ccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            344556678899999998876543 3  444444

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=95.09  E-value=0.29  Score=33.39  Aligned_cols=67  Identities=16%  Similarity=0.253  Sum_probs=41.5

Q ss_pred             CCCCEEEEEeCCCcEEEEeCCC----CC-eEE--ee--------------------ccccceEEEEEcc----CCCEEEE
Q psy15612         28 PSGEWLAVGMENSNVEVLHALK----PD-KYQ--LH--------------------LHESCVLSLRFAA----CGKWFVS   76 (131)
Q Consensus        28 ~~~~~l~~~~~~~~v~~~~~~~----~~-~~~--~~--------------------~~~~~v~~~~~~~----~~~~~~~   76 (131)
                      +++..++.+..||.+.......    +. ...  +.                    ..........++.    +..++++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4667778888888888777653    11 111  00                    0123345566665    6778889


Q ss_pred             eCCCCeEEEeeCCCCceE
Q psy15612         77 TGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~   94 (131)
                      .+.|+.+++||+.+++++
T Consensus       236 l~~D~~LRiW~l~t~~~~  253 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCL  253 (547)
T ss_dssp             EETTSEEEEEETTTTCEE
T ss_pred             EeCCCeEEEEECCCCeEE
Confidence            999999999999999984

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=94.96  E-value=0.55  Score=30.02  Aligned_cols=100  Identities=15%  Similarity=0.138  Sum_probs=54.6

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE---e----eccccceEEEEEccC---CCEEE-EeCCC--------
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ---L----HLHESCVLSLRFAAC---GKWFV-STGKD--------   80 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~~~-~~~~~--------   80 (131)
                      ...+|+|.|+|+++++ ...|.|.+++........   +    .........++++|+   ..+++ ..+..        
T Consensus         3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVA-ERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             SEEEEEEETTSCEEEE-ETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             CceEEEEeCCCcEEEE-eCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            4678999999877665 569999999933322111   1    123456789999994   23333 33311        


Q ss_pred             CeEEEeeCCCC-------ceEE-e-c---CCCCCeEEEEECCCCCEEEEecC
Q psy15612         81 NLLNAWRTPYG-------ASIF-Q-S---KESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        81 ~~i~~w~~~~~-------~~~~-~-~---~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      ..|.-|....+       +.+. . .   .....-..+.|.|+|.+.++.+.
T Consensus        82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~  133 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGD  133 (331)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-
T ss_pred             eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCC
Confidence            23444444333       1111 1 1   23455677999999976666543

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG1916|consensus

Probab=94.86  E-value=0.034  Score=39.71  Aligned_cols=113  Identities=10%  Similarity=0.009  Sum_probs=65.5

Q ss_pred             cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCC--CCCe-E-----EeeccccceEEEEEcc---CCCEEEEeCCCCeE
Q psy15612         16 DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHAL--KPDK-Y-----QLHLHESCVLSLRFAA---CGKWFVSTGKDNLL   83 (131)
Q Consensus        16 ~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~--~~~~-~-----~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~i   83 (131)
                      +..+.+..+.|.. +...+.  ..-|.+.+|++.  .+++ .     ........+.-+.|.|   +..++..+-.++.+
T Consensus       130 gf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i  207 (1283)
T KOG1916|consen  130 GFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEI  207 (1283)
T ss_pred             cCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCce
Confidence            4566677777733 111221  233567778764  3332 1     1222333445555554   55667777777888


Q ss_pred             EEeeCCCCceEEecCCCCCeEEE-----------EECCCCCEEEEecCCCcEEEEEee
Q psy15612         84 NAWRTPYGASIFQSKESSSVLSC-----------DISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        84 ~~w~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.++..........|...+..+           ..+|||+.++..+.||.++.|.+.
T Consensus       208 ~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  208 RLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             eEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence            87766543332222244443322           269999999999999999999763

>KOG3630|consensus

Probab=94.85  E-value=0.16  Score=37.39  Aligned_cols=101  Identities=11%  Similarity=0.042  Sum_probs=64.7

Q ss_pred             CCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEE
Q psy15612         18 SSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIF   95 (131)
Q Consensus        18 ~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~   95 (131)
                      .....++.|+|.-. ..+....|+.|++..+..... ..-........+++|+|.|+.++.+-..|++.-|...-.....
T Consensus       155 ~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~  234 (1405)
T KOG3630|consen  155 PVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSE  234 (1405)
T ss_pred             ccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeec
Confidence            34467788888533 345556677777766543221 1112234567899999999999999999988777654221111


Q ss_pred             e----cCCCCCeEEEEECCCCCEEEEe
Q psy15612         96 Q----SKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        96 ~----~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                      .    .....+|.+++|-....++++-
T Consensus       235 ip~Pp~~e~yrvl~v~Wl~t~eflvvy  261 (1405)
T KOG3630|consen  235 IPEPPVEENYRVLSVTWLSTQEFLVVY  261 (1405)
T ss_pred             ccCCCcCCCcceeEEEEecceeEEEEe
Confidence            1    1125889999998777766653

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=94.85  E-value=0.56  Score=29.58  Aligned_cols=114  Identities=14%  Similarity=0.134  Sum_probs=70.7

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe----eccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL----HLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~   73 (131)
                      ++|.|+.+.+.-...   ...+--..+.  -.|++...+..+.-+.+.|+.......+    .........+..|  |++
T Consensus       108 L~IvDIS~P~sP~~~~~lnt~gyaygv~--vsGn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~IS--Gn~  183 (370)
T COG5276         108 LRIVDISTPDSPTLIGFLNTDGYAYGVY--VSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAIS--GNY  183 (370)
T ss_pred             eEEEeccCCCCcceeccccCCceEEEEE--ecCCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEEe--cCe
Confidence            467777655443333   2223333443  3578877777566677889876653222    2233334566665  788


Q ss_pred             EEEeCCCCeEEEeeCCCCceEEecC---CCCCeEEEEECCCCCEEEEe
Q psy15612         74 FVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~  118 (131)
                      ...+.+|+.+.+.|+.+.....+.+   .+..+.++..+++..+++..
T Consensus       184 AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy  231 (370)
T COG5276         184 AYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVY  231 (370)
T ss_pred             EEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEc
Confidence            8888899999999998776653332   33477888888776655543

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=94.84  E-value=0.77  Score=31.06  Aligned_cols=25  Identities=16%  Similarity=0.383  Sum_probs=22.2

Q ss_pred             CCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         70 CGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        70 ~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      .+..++.++.++.++.+|..+|+.+
T Consensus       405 ~g~~v~~g~~dG~l~ald~~tG~~l  429 (488)
T cd00216         405 AGNLVFAGAADGYFRAFDATTGKEL  429 (488)
T ss_pred             cCCeEEEECCCCeEEEEECCCCcee
Confidence            4677888889999999999999998

The alignment model contains an 8-bladed beta-propeller.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=94.80  E-value=0.53  Score=29.08  Aligned_cols=115  Identities=9%  Similarity=0.123  Sum_probs=72.1

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEe--ecc---ccceEEEEEccCCCEEE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQL--HLH---ESCVLSLRFAACGKWFV   75 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~--~~~---~~~v~~~~~~~~~~~~~   75 (131)
                      .+||.++-+.+..+...+.-..++  .+++.|+.......+..+|..+.+. ..+  ...   -..+..+.+. +|...+
T Consensus       113 f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyA  189 (264)
T PF05096_consen  113 FVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYA  189 (264)
T ss_dssp             EEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEE
T ss_pred             EEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEE
Confidence            478888888888876555555665  4677777777777899999887664 222  222   2245567776 677777


Q ss_pred             EeCCCCeEEEeeCCCCceEEec----------C------CCCCeEEEEECCCCCEEEEec
Q psy15612         76 STGKDNLLNAWRTPYGASIFQS----------K------ESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~~~~----------~------~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      -.-....|...|..+|+.....          .      ...-...+|+.|....+...+
T Consensus       190 NVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  190 NVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             EETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             EeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            7777788899999999987210          0      124578999998766555444

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=94.53  E-value=0.84  Score=30.18  Aligned_cols=54  Identities=11%  Similarity=0.204  Sum_probs=38.9

Q ss_pred             cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC
Q psy15612         60 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK  113 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~  113 (131)
                      +++..++.||+|++++.-..++.+.+....-.+..  ........+..+.|..+..
T Consensus       217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da  272 (410)
T PF04841_consen  217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA  272 (410)
T ss_pred             CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence            57899999999999999888899888876544444  3333345666777765543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=94.53  E-value=0.49  Score=34.22  Aligned_cols=72  Identities=13%  Similarity=0.126  Sum_probs=47.7

Q ss_pred             EeCCCCceeee-ecCCCCeEEEEECCCCCEEEE-EeCCC-----cEEEEeCCCCC--eEEeeccccceEEEEEccCCCEE
Q psy15612          4 QSVSPGRQLQQ-HDFSSQIFSLGYCPSGEWLAV-GMENS-----NVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         4 wd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~-~~~~~-----~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~   74 (131)
                      =|......... +.....+.+.+|||||+.|+. .+.++     .|.+-++.+..  +.++......|..-...++|...
T Consensus       334 ~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~e~gdt~  413 (912)
T TIGR02171       334 IDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVLENGDTV  413 (912)
T ss_pred             EecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEecCCCCeE
Confidence            34443333334 567788999999999999987 44333     47777886543  34555556677777777777654


Q ss_pred             E
Q psy15612         75 V   75 (131)
Q Consensus        75 ~   75 (131)
                      +
T Consensus       414 i  414 (912)
T TIGR02171       414 I  414 (912)
T ss_pred             E
Confidence            4

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=94.50  E-value=0.63  Score=28.55  Aligned_cols=74  Identities=8%  Similarity=0.132  Sum_probs=47.8

Q ss_pred             eeccccceEEEEEccCCC-EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         55 LHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        55 ~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.+-...+..++|+|+.. .+++....+.|...+.. |+.+  .....-+..-.+++..++.++++.-.++.+.+.++
T Consensus        17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~   93 (248)
T PF06977_consen   17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI   93 (248)
T ss_dssp             -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred             CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence            344455689999999754 66777888888888864 7766  22333466788888888887777656788877765

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=94.43  E-value=0.97  Score=32.86  Aligned_cols=75  Identities=11%  Similarity=0.055  Sum_probs=50.3

Q ss_pred             CcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEE-eCCCC-----eEEEeeCCCCc-e-EEecCCCCCeEEEEECC
Q psy15612         40 SNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVS-TGKDN-----LLNAWRTPYGA-S-IFQSKESSSVLSCDISA  110 (131)
Q Consensus        40 ~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~-~~~~~-----~i~~w~~~~~~-~-~~~~~~~~~v~~~~~~~  110 (131)
                      +.+.+-|..+...+.+ ..+...+..-+|||||+.++- .+..+     .|++-++.+.. - +.+......|..-...+
T Consensus       329 ~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aaiprwrv~e  408 (912)
T TIGR02171       329 GNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAIPRWRVLE  408 (912)
T ss_pred             CeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccccceEecC
Confidence            4788888887776656 667888999999999999887 44433     47777876532 2 23433455555555566


Q ss_pred             CCCE
Q psy15612        111 DDKY  114 (131)
Q Consensus       111 ~~~~  114 (131)
                      +|..
T Consensus       409 ~gdt  412 (912)
T TIGR02171       409 NGDT  412 (912)
T ss_pred             CCCe
Confidence            5553

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=94.41  E-value=0.98  Score=30.41  Aligned_cols=100  Identities=15%  Similarity=0.137  Sum_probs=61.2

Q ss_pred             CCCEEEEEeCCCcEEEE-eCCCCCe---E---EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCC
Q psy15612         29 SGEWLAVGMENSNVEVL-HALKPDK---Y---QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESS  101 (131)
Q Consensus        29 ~~~~l~~~~~~~~v~~~-~~~~~~~---~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~  101 (131)
                      .|..+..++.||.+.-| |.+....   .   .+.-...++..+.-..+.+-+++-...|++..+.....+.+.....-+
T Consensus       279 Gg~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~  358 (733)
T COG4590         279 GGFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQ  358 (733)
T ss_pred             CceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhc
Confidence            34556777888888877 4443221   1   111122333333322234567788888888888766555554333444


Q ss_pred             CeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612        102 SVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       102 ~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+..+++||.+.++++-. .++++++.+
T Consensus       359 ~~~~~~~Sp~~~~Ll~e~-~gki~~~~l  385 (733)
T COG4590         359 APQLVAMSPNQAYLLSED-QGKIRLAQL  385 (733)
T ss_pred             CcceeeeCcccchheeec-CCceEEEEe
Confidence            677899999999987754 467887765

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=94.34  E-value=0.53  Score=27.05  Aligned_cols=30  Identities=20%  Similarity=0.248  Sum_probs=23.2

Q ss_pred             CCCeEEEEECCCC------CEEEEecCCCcEEEEEe
Q psy15612        100 SSSVLSCDISADD------KYIVTGSGDKKATVYEV  129 (131)
Q Consensus       100 ~~~v~~~~~~~~~------~~l~~~~~d~~i~vw~~  129 (131)
                      ...+..++|||.|      -+|++...++.+.+|..
T Consensus        85 ~~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~  120 (173)
T PF12657_consen   85 SSQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGP  120 (173)
T ss_pred             cccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEec
Confidence            3488999999943      36778888999999863

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=94.33  E-value=0.84  Score=29.34  Aligned_cols=126  Identities=10%  Similarity=-0.042  Sum_probs=67.4

Q ss_pred             CEEEeCCCCceeeee--cC--CC----CeEEEEECCCCCEEEEE--eCCCcEEEEeCCCCCeEEeeccccceEEEEEccC
Q psy15612          1 MYLQSVSPGRQLQQH--DF--SS----QIFSLGYCPSGEWLAVG--MENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~--~~----~v~~~~~~~~~~~l~~~--~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~   70 (131)
                      |.+||.++-+....+  ..  ..    ....+++++|+++++..  +-...|.+.|+..++......-++   |...-|.
T Consensus        69 v~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG---C~~iyP~  145 (342)
T PF06433_consen   69 VEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG---CWLIYPS  145 (342)
T ss_dssp             EEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS---EEEEEEE
T ss_pred             EEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC---EEEEEec
Confidence            468999987766544  11  11    22456778999988765  445578999998887633222222   2222232


Q ss_pred             -CCEEEEeCCCCeEEEeeCC-CCceE-----EecCCCC-CeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         71 -GKWFVSTGKDNLLNAWRTP-YGASI-----FQSKESS-SVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        71 -~~~~~~~~~~~~i~~w~~~-~~~~~-----~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                       .+.|.+-+.||.+.-..+. .|+..     ....... ....-++...+..++..+.+|.|.--|+
T Consensus       146 ~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dl  212 (342)
T PF06433_consen  146 GNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADL  212 (342)
T ss_dssp             ETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEE
T ss_pred             CCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEec
Confidence             2456677778888777776 45544     1111122 2223344444444444555666655443

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG2444|consensus

Probab=94.21  E-value=0.17  Score=30.38  Aligned_cols=61  Identities=11%  Similarity=0.194  Sum_probs=40.0

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccc-cceEEEEEccCCCEEEEe--CCCCeEEEeeCC
Q psy15612         29 SGEWLAVGMENSNVEVLHALKPDK-YQLHLHE-SCVLSLRFAACGKWFVST--GKDNLLNAWRTP   89 (131)
Q Consensus        29 ~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~-~~v~~~~~~~~~~~~~~~--~~~~~i~~w~~~   89 (131)
                      ++.+..++..++.++.|+....+. .....|. ........+..+..+..+  |.+..++.|++.
T Consensus       113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve  177 (238)
T KOG2444|consen  113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE  177 (238)
T ss_pred             ccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence            445677888899999999887664 3344454 344444455556666665  667777777765

>KOG2377|consensus

Probab=94.20  E-value=1.1  Score=30.17  Aligned_cols=94  Identities=9%  Similarity=0.014  Sum_probs=57.9

Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCCCC---eEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE---
Q psy15612         22 FSLGYCPSGEWLAVGMENSNVEVLHALKPD---KYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI---   94 (131)
Q Consensus        22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~---   94 (131)
                      +.+-|....+.+++. ..|.+.=|......   ...+ ...+++|.+++||+|.+.++.--.++.+.+++....+..   
T Consensus        26 ngvFfDDaNkqlfav-rSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~  104 (657)
T KOG2377|consen   26 NGVFFDDANKQLFAV-RSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEY  104 (657)
T ss_pred             cceeeccCcceEEEE-ecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHH
Confidence            344455444444433 33445556554332   1222 235679999999999999999999999999987433322   


Q ss_pred             --EecCCCCCeEEEEECCCCCEEEE
Q psy15612         95 --FQSKESSSVLSCDISADDKYIVT  117 (131)
Q Consensus        95 --~~~~~~~~v~~~~~~~~~~~l~~  117 (131)
                        ..+.....|....|+.. +-++.
T Consensus       105 ~~~ck~k~~~IlGF~W~~s-~e~A~  128 (657)
T KOG2377|consen  105 TQECKTKNANILGFCWTSS-TEIAF  128 (657)
T ss_pred             HHHhccCcceeEEEEEecC-eeEEE
Confidence              23334566888888766 33443

>PHA03098 kelch-like protein; Provisional

Probab=94.13  E-value=1.2  Score=30.38  Aligned_cols=65  Identities=8%  Similarity=-0.039  Sum_probs=35.3

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCCeEEeecc--ccceEEEEEccCCCEEEEeCCC------CeEEEeeCCCCceE
Q psy15612         29 SGEWLAVGMEN-----SNVEVLHALKPDKYQLHLH--ESCVLSLRFAACGKWFVSTGKD------NLLNAWRTPYGASI   94 (131)
Q Consensus        29 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~------~~i~~w~~~~~~~~   94 (131)
                      +++.++.|+.+     ..+..||..+..-......  ...-.+++ .-+++..+.|+..      +.+..||..+.+..
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~  419 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWS  419 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeee
Confidence            56666777654     3467788876654332211  11111222 2356666666632      35788898877665

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=94.10  E-value=1  Score=29.29  Aligned_cols=99  Identities=13%  Similarity=0.039  Sum_probs=56.1

Q ss_pred             CCeEEEEECCCCCEEEEEe-----------CCC-cEEEEeCCC--CCe---EEeeccccceEEEEEccCCCEEEEeCCCC
Q psy15612         19 SQIFSLGYCPSGEWLAVGM-----------ENS-NVEVLHALK--PDK---YQLHLHESCVLSLRFAACGKWFVSTGKDN   81 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~-----------~~~-~v~~~~~~~--~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~   81 (131)
                      .....++|.++|+++++..           ..+ .|.+++-..  ++.   ..+...-.....+++.++|  ++.++...
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~   91 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPD   91 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCe
Confidence            4577899999999877653           122 677766532  221   2233333456789999888  44444443


Q ss_pred             eEEEeeCCC-----CceE-Eec--C-----CCCCeEEEEECCCCCEEEEec
Q psy15612         82 LLNAWRTPY-----GASI-FQS--K-----ESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        82 ~i~~w~~~~-----~~~~-~~~--~-----~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      ..++.+...     ++.. ...  .     +......+.|.|+|++.++.+
T Consensus        92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            333334421     1221 111  1     134477899999998766544

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=94.10  E-value=1.1  Score=29.61  Aligned_cols=72  Identities=17%  Similarity=0.259  Sum_probs=48.3

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EE--eec------cccceEEEEEcc-----CC---CEEEEeCC
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQ--LHL------HESCVLSLRFAA-----CG---KWFVSTGK   79 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~--~~~------~~~~v~~~~~~~-----~~---~~~~~~~~   79 (131)
                      ..++|.+++.| +=.+++.|..+|.+.+.|+++..+ ..  +..      ....+.++.|+.     |+   -.+++|..
T Consensus        85 ~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn  163 (395)
T PF08596_consen   85 KQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN  163 (395)
T ss_dssp             -S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred             cCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence            46889999997 566999999999999999988774 22  111      223566777762     33   35677788


Q ss_pred             CCeEEEeeCC
Q psy15612         80 DNLLNAWRTP   89 (131)
Q Consensus        80 ~~~i~~w~~~   89 (131)
                      .|.+.+|.+.
T Consensus       164 ~G~v~~fkIl  173 (395)
T PF08596_consen  164 SGNVLTFKIL  173 (395)
T ss_dssp             TSEEEEEEEE
T ss_pred             CCCEEEEEEe
Confidence            8888888654

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=94.04  E-value=0.81  Score=28.08  Aligned_cols=103  Identities=15%  Similarity=0.128  Sum_probs=62.4

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEe-CCCCCe--EEeecc--ccceEEEEEccCCCEEEEeC---CCCeEEEeeCC-
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLH-ALKPDK--YQLHLH--ESCVLSLRFAACGKWFVSTG---KDNLLNAWRTP-   89 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~-~~~~~~--~~~~~~--~~~v~~~~~~~~~~~~~~~~---~~~~i~~w~~~-   89 (131)
                      ..+....|++++........+....++. ...+..  ..+...  ...|..+++||||..++...   .++.+.+=.+. 
T Consensus        66 ~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r  145 (253)
T PF10647_consen   66 GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVR  145 (253)
T ss_pred             CccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEe
Confidence            4677888899877666655555555553 333332  222222  12799999999999877654   24555554322 


Q ss_pred             --CC--ceE---Ee--cCCCCCeEEEEECCCCCEEEEecCC
Q psy15612         90 --YG--ASI---FQ--SKESSSVLSCDISADDKYIVTGSGD  121 (131)
Q Consensus        90 --~~--~~~---~~--~~~~~~v~~~~~~~~~~~l~~~~~d  121 (131)
                        .+  ..+   ..  ......+..++|.+++.+++.+...
T Consensus       146 ~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~  186 (253)
T PF10647_consen  146 DGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSA  186 (253)
T ss_pred             CCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCC
Confidence              23  111   11  1235678999999999987766553

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2395|consensus

Probab=94.03  E-value=0.4  Score=32.54  Aligned_cols=65  Identities=14%  Similarity=0.222  Sum_probs=46.5

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612         21 IFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        21 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      ..|.+-.. ..+++.|+.+|.|++||-...+. ..+++-..+|..+..+.+|++++..+ +..+.+.+
T Consensus       433 Fsc~aTT~-sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~  498 (644)
T KOG2395|consen  433 FSCFATTE-SGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLID  498 (644)
T ss_pred             cceeeecC-CceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEE
Confidence            33444333 34778899999999999844443 45677788999999999999988776 44444444

>PHA03098 kelch-like protein; Provisional

Probab=94.00  E-value=1.3  Score=30.25  Aligned_cols=98  Identities=15%  Similarity=0.091  Sum_probs=48.9

Q ss_pred             CCCEEEEEeCC------CcEEEEeCCCCCeEEeecccc--ceEEEEEccCCCEEEEeCCC--------CeEEEeeCCCCc
Q psy15612         29 SGEWLAVGMEN------SNVEVLHALKPDKYQLHLHES--CVLSLRFAACGKWFVSTGKD--------NLLNAWRTPYGA   92 (131)
Q Consensus        29 ~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~--------~~i~~w~~~~~~   92 (131)
                      +++..+.|+..      ..+..||..+.+-......+.  .-.++ ...+++..+.|+.+        ..+..||..+.+
T Consensus       389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~  467 (534)
T PHA03098        389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCA-IYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK  467 (534)
T ss_pred             CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceE-EEECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence            56666666532      347788887665433221111  11122 22345655666542        237888988877


Q ss_pred             eEEecCC---CCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612         93 SIFQSKE---SSSVLSCDISADDKYIVTGSGD-----KKATVYEV  129 (131)
Q Consensus        93 ~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~  129 (131)
                      .......   ......+.  .+++.++.|+.+     ..+.++|+
T Consensus       468 W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~  510 (534)
T PHA03098        468 WTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDD  510 (534)
T ss_pred             eeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeC
Confidence            6632211   11111222  256666676653     35666664

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=93.94  E-value=1.4  Score=30.52  Aligned_cols=69  Identities=10%  Similarity=0.014  Sum_probs=43.8

Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCC
Q psy15612         22 FSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPY   90 (131)
Q Consensus        22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~   90 (131)
                      ..+.|+|....|+.-.....-.+++.....  +..=....+.|.|.+|.+||+.++.+ +..=..++||-..
T Consensus       116 QGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  116 QGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             CcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence            467788888877665443333344554322  22223456789999999999987765 3344567898653

>TIGR03032 conserved hypothetical protein TIGR03032

Probab=93.90  E-value=1  Score=28.71  Aligned_cols=84  Identities=8%  Similarity=0.037  Sum_probs=56.7

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCC-------------------CeEEEeeC
Q psy15612         29 SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKD-------------------NLLNAWRT   88 (131)
Q Consensus        29 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~-------------------~~i~~w~~   88 (131)
                      +|++-++-+..+.+..+|..+++...+..-++....++|.  |++++++ |.-                   ..+.+.|+
T Consensus       212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vidl  289 (335)
T TIGR03032       212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAVIDL  289 (335)
T ss_pred             CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEEEEC
Confidence            4666667677788888888877765555556677788887  7777654 221                   23778888


Q ss_pred             CCCceE---EecCCCCCeEEEEECCCCCE
Q psy15612         89 PYGASI---FQSKESSSVLSCDISADDKY  114 (131)
Q Consensus        89 ~~~~~~---~~~~~~~~v~~~~~~~~~~~  114 (131)
                      ++|..+   ...+.-..+..+++-|.-+.
T Consensus       290 ~tG~vv~~l~feg~v~EifdV~vLPg~r~  318 (335)
T TIGR03032       290 NSGDVVHWLRFEGVIEEIYDVAVLPGVRR  318 (335)
T ss_pred             CCCCEEEEEEeCCceeEEEEEEEecCCCC
Confidence            888876   23334466777887776443

This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=93.90  E-value=1.3  Score=29.98  Aligned_cols=93  Identities=12%  Similarity=0.128  Sum_probs=50.8

Q ss_pred             EEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE-----------------eCCCCeEEEeeCCCCceE
Q psy15612         32 WLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS-----------------TGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        32 ~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----------------~~~~~~i~~w~~~~~~~~   94 (131)
                      .++.++.++.+..+|.++++..-.....  ...+..+| +..++.                 ...++.+.-.|..+|+.+
T Consensus       303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~--~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~  379 (488)
T cd00216         303 AIVHAPKNGFFYVLDRTTGKLISARPEV--EQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVV  379 (488)
T ss_pred             EEEEECCCceEEEEECCCCcEeeEeEee--ccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEe
Confidence            4677788999999999998852211100  01122333 222221                 123567888888888887


Q ss_pred             EecCCC---------CCe--EEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         95 FQSKES---------SSV--LSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        95 ~~~~~~---------~~v--~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      -.....         ...  ..+.  -.+..++.++.|+.+..+|.
T Consensus       380 W~~~~~~~~~~~~~g~~~~~~~~~--~~g~~v~~g~~dG~l~ald~  423 (488)
T cd00216         380 WEKREGTIRDSWNIGFPHWGGSLA--TAGNLVFAGAADGYFRAFDA  423 (488)
T ss_pred             eEeeCCccccccccCCcccCcceE--ecCCeEEEECCCCeEEEEEC
Confidence            222211         111  1111  14566777778888877764

The alignment model contains an 8-bladed beta-propeller.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=93.38  E-value=0.28  Score=20.52  Aligned_cols=25  Identities=24%  Similarity=0.296  Sum_probs=17.9

Q ss_pred             CCCCEEEEEe-CCCcEEEEeCCCCCe
Q psy15612         28 PSGEWLAVGM-ENSNVEVLHALKPDK   52 (131)
Q Consensus        28 ~~~~~l~~~~-~~~~v~~~~~~~~~~   52 (131)
                      |+++.|+.+. .++.|.++|..+...
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~   26 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKV   26 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeE
Confidence            5677666544 477899999977765

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=93.18  E-value=1.1  Score=26.84  Aligned_cols=99  Identities=17%  Similarity=0.264  Sum_probs=58.7

Q ss_pred             CEEEEEeCCCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEeCCC---C---eEEEe-eCCCC----ceE---
Q psy15612         31 EWLAVGMENSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVSTGKD---N---LLNAW-RTPYG----ASI---   94 (131)
Q Consensus        31 ~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~---~i~~w-~~~~~----~~~---   94 (131)
                      ..|+.+.....|.+|++.....  .....--+.|..+.+++.|.++++--.+   .   .+++| |++..    +++   
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vR  108 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVR  108 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEE
Confidence            3444445566799999984443  2223334788999999999999875322   2   45554 33211    111   


Q ss_pred             --------------------EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEeeC
Q psy15612         95 --------------------FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        95 --------------------~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~~  131 (131)
                                          ...+....+.+++..|. |+++ .|+. +++.+|.+.|
T Consensus       109 iaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~Ll-Vg~~-~~l~lf~l~~  164 (215)
T PF14761_consen  109 IAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLL-VGCG-NKLVLFTLKY  164 (215)
T ss_pred             EcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEE-EEcC-CEEEEEEEEE
Confidence                                11123456778888874 5544 5543 5788888753

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=93.11  E-value=1.1  Score=26.79  Aligned_cols=48  Identities=13%  Similarity=0.050  Sum_probs=35.0

Q ss_pred             EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecC
Q psy15612         73 WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      .+..+...+.|.+|++.+....  .....-+.|..+.++..|.++++--.
T Consensus        30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~   79 (215)
T PF14761_consen   30 ALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEE   79 (215)
T ss_pred             eEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEe
Confidence            3434456777999999843333  45556689999999999999998643

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=93.00  E-value=1.5  Score=27.80  Aligned_cols=68  Identities=12%  Similarity=0.205  Sum_probs=43.7

Q ss_pred             ceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCe-----EEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         61 CVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSV-----LSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        61 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v-----~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      .+.++...++|.+|+++-.-..|.+.+.++|+.+ .+.+....-     ...++-.+.+++-.+..++.|.++|
T Consensus       145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFD  218 (299)
T PF14269_consen  145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFD  218 (299)
T ss_pred             EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEc
Confidence            3567777888999999888888999999999988 443331111     1233334444444444566666665

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=92.99  E-value=1.3  Score=30.39  Aligned_cols=51  Identities=10%  Similarity=0.120  Sum_probs=33.3

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK   52 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~   52 (131)
                      .-+|+.+++.........+...-.....+..++.+..++.++.+|.++++.
T Consensus       444 ~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~  494 (527)
T TIGR03075       444 IAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEE  494 (527)
T ss_pred             EEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCE
Confidence            457888888877663332211111112455677788899999999999985

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=92.61  E-value=1.9  Score=28.06  Aligned_cols=98  Identities=11%  Similarity=0.095  Sum_probs=53.7

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEE-eCCCC-----CeEE----eec----cccceEEEEEccCCCEEEEeCCC----
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVL-HALKP-----DKYQ----LHL----HESCVLSLRFAACGKWFVSTGKD----   80 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~-~~~~~-----~~~~----~~~----~~~~v~~~~~~~~~~~~~~~~~~----   80 (131)
                      .....+++.+++ .++ +... .|..+ +....     +...    +..    +......++|.|||...++.+..    
T Consensus        72 ~~p~Gi~~~~~G-lyV-~~~~-~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~  148 (367)
T TIGR02604        72 SMVTGLAVAVGG-VYV-ATPP-DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASK  148 (367)
T ss_pred             CCccceeEecCC-EEE-eCCC-eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCce
Confidence            345778888888 443 3333 35444 44321     2111    111    12346789999999865543311    


Q ss_pred             ---------------CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec
Q psy15612         81 ---------------NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        81 ---------------~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                                     +.+.-++..+++.......-.....++|+|+|+++++-.
T Consensus       149 ~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       149 VTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             eccCCCccCcccccCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence                           335555555444432222234456899999999876644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG1900|consensus

Probab=92.57  E-value=3.7  Score=31.30  Aligned_cols=129  Identities=14%  Similarity=0.233  Sum_probs=73.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEE-CC-------CCCEEEEEeCCCcEEEEeCC----CCCe------EEeeccccc
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGY-CP-------SGEWLAVGMENSNVEVLHAL----KPDK------YQLHLHESC   61 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~-~~-------~~~~l~~~~~~~~v~~~~~~----~~~~------~~~~~~~~~   61 (131)
                      +.+|+.+++.....+ +....|..+.. -|       .=++++.-..--.+.++-+.    +...      .++......
T Consensus       101 L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~dg~~  180 (1311)
T KOG1900|consen  101 LFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKISVDGVS  180 (1311)
T ss_pred             EEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeeecCCce
Confidence            468999886666555 44444555544 22       22222222222335554332    2221      223344667


Q ss_pred             eEEEEEccCCCEEEEeCCCCeEEEe--eCCCC---c-eE-----------------Eec-CCCCCeEEEEECCCCCEEEE
Q psy15612         62 VLSLRFAACGKWFVSTGKDNLLNAW--RTPYG---A-SI-----------------FQS-KESSSVLSCDISADDKYIVT  117 (131)
Q Consensus        62 v~~~~~~~~~~~~~~~~~~~~i~~w--~~~~~---~-~~-----------------~~~-~~~~~v~~~~~~~~~~~l~~  117 (131)
                      |.++....+|+.|++|- |+.++=.  ...++   + +.                 ... .+.++|..+.....-..+.+
T Consensus       181 V~~I~~t~nGRIF~~G~-dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~  259 (1311)
T KOG1900|consen  181 VNCITYTENGRIFFAGR-DGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNILYV  259 (1311)
T ss_pred             EEEEEeccCCcEEEeec-CCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccceeee
Confidence            88999888899887665 4443322  21111   1 10                 011 34678999999888788899


Q ss_pred             ecCCCcEEEEEee
Q psy15612        118 GSGDKKATVYEVI  130 (131)
Q Consensus       118 ~~~d~~i~vw~~~  130 (131)
                      -+..+++.+||+.
T Consensus       260 lsek~~v~~Y~i~  272 (1311)
T KOG1900|consen  260 LSEKGTVSAYDIG  272 (1311)
T ss_pred             eccCceEEEEEcc
Confidence            9999999999973

>KOG4441|consensus

Probab=92.53  E-value=2.5  Score=29.39  Aligned_cols=92  Identities=17%  Similarity=0.140  Sum_probs=51.3

Q ss_pred             CCCEEEEEeCCCc-----EEEEeCCCCCeEEeeccccceEEEEEc-cCCCEEEEeCCCC------eEEEeeCCCCceEEe
Q psy15612         29 SGEWLAVGMENSN-----VEVLHALKPDKYQLHLHESCVLSLRFA-ACGKWFVSTGKDN------LLNAWRTPYGASIFQ   96 (131)
Q Consensus        29 ~~~~l~~~~~~~~-----v~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~------~i~~w~~~~~~~~~~   96 (131)
                      +|...++|+.|+.     +..||..+.+-.............+.. -+|...+.|+.++      .+..||..+.+....
T Consensus       380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~  459 (571)
T KOG4441|consen  380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLI  459 (571)
T ss_pred             CCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeec
Confidence            6777788888764     777888877654333222222222222 2577777777543      477889888877632


Q ss_pred             cCC---CCCeEEEEECCCCCEEEEecCCC
Q psy15612         97 SKE---SSSVLSCDISADDKYIVTGSGDK  122 (131)
Q Consensus        97 ~~~---~~~v~~~~~~~~~~~l~~~~~d~  122 (131)
                      ...   ..... ++ .-++.+.+.|+.|+
T Consensus       460 ~~M~~~R~~~g-~a-~~~~~iYvvGG~~~  486 (571)
T KOG4441|consen  460 APMNTRRSGFG-VA-VLNGKIYVVGGFDG  486 (571)
T ss_pred             CCcccccccce-EE-EECCEEEEECCccC
Confidence            221   11111 22 22556666776665

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=92.38  E-value=0.81  Score=23.30  Aligned_cols=40  Identities=8%  Similarity=0.070  Sum_probs=28.3

Q ss_pred             CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612         79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                      ..|.+..||+.+++...+...-.....+++++++.+++.+
T Consensus        35 ~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~   74 (89)
T PF03088_consen   35 PTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVA   74 (89)
T ss_dssp             --EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEE
T ss_pred             CCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEE
Confidence            3566888999988876555445678899999999976543

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=92.37  E-value=1.7  Score=26.99  Aligned_cols=115  Identities=9%  Similarity=-0.021  Sum_probs=65.4

Q ss_pred             eeeecCCCC--eEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCeEEeeccccc--eEEEEEccCCCEEEEeCCCCeEEE
Q psy15612         12 LQQHDFSSQ--IFSLGYCPSGEWLAVGMENS--NVEVLHALKPDKYQLHLHESC--VLSLRFAACGKWFVSTGKDNLLNA   85 (131)
Q Consensus        12 ~~~~~~~~~--v~~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~i~~   85 (131)
                      +..+.|...  -..+.|..++.++-+.+.-|  .++.+|+.+++......-+..  -..++.. +++.....-.++...+
T Consensus        36 v~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~  114 (264)
T PF05096_consen   36 VETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFV  114 (264)
T ss_dssp             EEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEE
T ss_pred             EEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEE
Confidence            344445443  45677767787777776655  588899999886433222222  2234433 2344455667888899


Q ss_pred             eeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         86 WRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        86 w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ||..+-+.+......+.=..++  .+++.++......++..+|.
T Consensus       115 yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP  156 (264)
T PF05096_consen  115 YDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDP  156 (264)
T ss_dssp             EETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-T
T ss_pred             EccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECC
Confidence            9998887773333334445565  35566665555567777764

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=92.31  E-value=1.8  Score=27.17  Aligned_cols=87  Identities=16%  Similarity=0.156  Sum_probs=52.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEe------CCCcEEEEeCCCCCeEEeec-----cccceEEEEEc
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGM------ENSNVEVLHALKPDKYQLHL-----HESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~------~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~   68 (131)
                      |.+||..+.+-...- +..+.|.++.|..+.+.++.|.      ....+..||+.+.....+..     -++++..+.+.
T Consensus        18 lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~~~   97 (281)
T PF12768_consen   18 LCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALTFI   97 (281)
T ss_pred             EEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEEee
Confidence            457887765544333 5678899999986676766653      34567889988777544443     23567777664


Q ss_pred             c-CCCEEE-EeC-C--CCeEEEee
Q psy15612         69 A-CGKWFV-STG-K--DNLLNAWR   87 (131)
Q Consensus        69 ~-~~~~~~-~~~-~--~~~i~~w~   87 (131)
                      . |+..+. .+. .  +..+..||
T Consensus        98 ~~d~~~~~~aG~~~~g~~~l~~~d  121 (281)
T PF12768_consen   98 SNDGSNFWVAGRSANGSTFLMKYD  121 (281)
T ss_pred             ccCCceEEEeceecCCCceEEEEc
Confidence            3 444333 332 2  23355665

>KOG4460|consensus

Probab=92.29  E-value=2.6  Score=29.02  Aligned_cols=74  Identities=8%  Similarity=0.088  Sum_probs=49.4

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCC----------CCC----eEEe--------eccccceEEEEEccCC---CEE
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHAL----------KPD----KYQL--------HLHESCVLSLRFAACG---KWF   74 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~----------~~~----~~~~--------~~~~~~v~~~~~~~~~---~~~   74 (131)
                      .|..+..++.|..++..+.+|.+.+ .+.          .++    ++.+        ....-.+..++|+|+.   ..+
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vM-eLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL  183 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVM-ELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL  183 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEE-EchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence            4677788999999988888884443 331          111    1111        1122346678999964   677


Q ss_pred             EEeCCCCeEEEeeCCCCceE
Q psy15612         75 VSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~   94 (131)
                      ..-+.|+.+++||......+
T Consensus       184 ~iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  184 VLLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             EEEecCcEEEEEecCCcchh
Confidence            77788999999998866665

>KOG4499|consensus

Probab=92.06  E-value=1.8  Score=26.58  Aligned_cols=46  Identities=11%  Similarity=0.172  Sum_probs=36.1

Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEc
Q psy15612         23 SLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFA   68 (131)
Q Consensus        23 ~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~   68 (131)
                      .++...+|.+.+++-+.++|..+|..++++ ..+.-....+.+++|-
T Consensus       216 Gm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFg  262 (310)
T KOG4499|consen  216 GMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFG  262 (310)
T ss_pred             cceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEec
Confidence            455566788888888889999999999986 5555567788999885

>KOG4460|consensus

Probab=91.92  E-value=3  Score=28.80  Aligned_cols=70  Identities=17%  Similarity=0.171  Sum_probs=48.0

Q ss_pred             cceEEEEEccCCCEEEEeCCCCeEEEe-----e----CCCCceE------------EecCCCCCeEEEEECCCC---CEE
Q psy15612         60 SCVLSLRFAACGKWFVSTGKDNLLNAW-----R----TPYGASI------------FQSKESSSVLSCDISADD---KYI  115 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w-----~----~~~~~~~------------~~~~~~~~v~~~~~~~~~---~~l  115 (131)
                      -.|..+..++.|+.++..+.+|.+.+.     .    +.+|+..            +.....-.+...+|+|++   ..+
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL  183 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL  183 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence            456778889999999988888875543     2    2344332            111233456788999975   566


Q ss_pred             EEecCCCcEEEEEe
Q psy15612        116 VTGSGDKKATVYEV  129 (131)
Q Consensus       116 ~~~~~d~~i~vw~~  129 (131)
                      .....|..+++||+
T Consensus       184 ~iL~sdnviRiy~l  197 (741)
T KOG4460|consen  184 VLLTSDNVIRIYSL  197 (741)
T ss_pred             EEEecCcEEEEEec
Confidence            66777899999986

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=91.80  E-value=3.1  Score=28.69  Aligned_cols=25  Identities=12%  Similarity=0.271  Sum_probs=21.1

Q ss_pred             CCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         70 CGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        70 ~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      .+..++.++.++.++.+|.++|+.+
T Consensus       471 ~g~lvf~g~~~G~l~a~D~~TGe~l  495 (527)
T TIGR03075       471 AGDLVFYGTLEGYFKAFDAKTGEEL  495 (527)
T ss_pred             CCcEEEEECCCCeEEEEECCCCCEe
Confidence            3456667788999999999999998

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG3616|consensus

Probab=91.74  E-value=0.96  Score=32.50  Aligned_cols=36  Identities=6%  Similarity=0.159  Sum_probs=29.6

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD   51 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~   51 (131)
                      .....+.++.-+|.++.++.+..|+.+.+|+.....
T Consensus        12 k~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~   47 (1636)
T KOG3616|consen   12 KEDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRR   47 (1636)
T ss_pred             cccceeeeeeecCCCceEEEEecCCcEEEEeecccc
Confidence            344567788888999999999999999999986544

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=91.44  E-value=0.44  Score=18.30  Aligned_cols=26  Identities=19%  Similarity=0.391  Sum_probs=18.4

Q ss_pred             CeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612        102 SVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus       102 ~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      .+..++++++|+.+++-+..+.|+++
T Consensus         3 ~P~gvav~~~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    3 YPHGVAVDSDGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             SEEEEEEETTSEEEEEECCCTEEEEE
T ss_pred             CCcEEEEeCCCCEEEEECCCCEEEEC
Confidence            35677888888877777766766654

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>KOG1900|consensus

Probab=91.40  E-value=4.5  Score=30.88  Aligned_cols=92  Identities=13%  Similarity=0.165  Sum_probs=54.4

Q ss_pred             eCCCcEEEEeCCCC-CeEEeeccccceEEEEE--------ccCCCEEEEeCCCCeEEEeeCC----CCceE-E-----ec
Q psy15612         37 MENSNVEVLHALKP-DKYQLHLHESCVLSLRF--------AACGKWFVSTGKDNLLNAWRTP----YGASI-F-----QS   97 (131)
Q Consensus        37 ~~~~~v~~~~~~~~-~~~~~~~~~~~v~~~~~--------~~~~~~~~~~~~~~~i~~w~~~----~~~~~-~-----~~   97 (131)
                      +.|..+.+|+..++ +...+.+-...|..+..        .|.=++++..+.--.+.++.+.    ++... +     ..
T Consensus        96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~  175 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS  175 (1311)
T ss_pred             EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence            45778999999874 44555555555555443        2333444444444445555332    22222 1     11


Q ss_pred             CCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         98 KESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      ..+-.|.++....+|+.+++|- ||  .+|.+.|
T Consensus       176 ~dg~~V~~I~~t~nGRIF~~G~-dg--~lyEl~Y  206 (1311)
T KOG1900|consen  176 VDGVSVNCITYTENGRIFFAGR-DG--NLYELVY  206 (1311)
T ss_pred             cCCceEEEEEeccCCcEEEeec-CC--CEEEEEE
Confidence            2467789999888999887764 45  6888876

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=91.38  E-value=3.2  Score=28.07  Aligned_cols=105  Identities=7%  Similarity=0.009  Sum_probs=60.4

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE------e-e-ccccceEEEEEccCC------CEEEEeC---
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ------L-H-LHESCVLSLRFAACG------KWFVSTG---   78 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~------~-~-~~~~~v~~~~~~~~~------~~~~~~~---   78 (131)
                      ..-.....|+|.|++++|++--..|.|++++..+.....      + . ........++++|+-      ++++...   
T Consensus        27 ~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~  106 (454)
T TIGR03606        27 SGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYK  106 (454)
T ss_pred             CCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEecc
Confidence            344567889999999877765446899998765443211      1 1 135667899999874      2444331   


Q ss_pred             -------CCCeEEEeeCCCC-------ceEEe-c--CCCCCeEEEEECCCCCEEEEecC
Q psy15612         79 -------KDNLLNAWRTPYG-------ASIFQ-S--KESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        79 -------~~~~i~~w~~~~~-------~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                             ....|.-|.+...       +.+.. .  ...+.-..+.|.|+|.++++.+.
T Consensus       107 ~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD  165 (454)
T TIGR03606       107 NGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGE  165 (454)
T ss_pred             CCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECC
Confidence                   1233444544311       11111 1  11233457889999987765544

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=91.24  E-value=4.4  Score=29.39  Aligned_cols=92  Identities=12%  Similarity=-0.016  Sum_probs=61.2

Q ss_pred             CCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC------eEEeecccc----------ceEEEEEccCCCEEEEeCCCC
Q psy15612         19 SQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD------KYQLHLHES----------CVLSLRFAACGKWFVSTGKDN   81 (131)
Q Consensus        19 ~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~------~~~~~~~~~----------~v~~~~~~~~~~~~~~~~~~~   81 (131)
                      .+...++|+|. ...+|..+..|...+|++....      ........+          .-..+.|.++-+.++.+++. 
T Consensus       146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~-  224 (765)
T PF10214_consen  146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS-  224 (765)
T ss_pred             CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-
Confidence            35788999984 5688999999999999992111      111111112          22368898887888777754 


Q ss_pred             eEEEeeCCCCceE---EecCCCCCeEEEEECCC
Q psy15612         82 LLNAWRTPYGASI---FQSKESSSVLSCDISAD  111 (131)
Q Consensus        82 ~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~  111 (131)
                      .+.++|+.+....   ........|..+.-+|.
T Consensus       225 ~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~  257 (765)
T PF10214_consen  225 KLMLIDFESNWQTEYLVTAKTWSWILDVKRSPD  257 (765)
T ss_pred             ceEEEECCCCCccchhccCCChhheeeEEecCC
Confidence            5678888876552   33345577888887776

These proteins are found in fungi.

>KOG0918|consensus

Probab=91.15  E-value=3.1  Score=27.55  Aligned_cols=93  Identities=8%  Similarity=0.085  Sum_probs=56.4

Q ss_pred             CEEEeCCCCceeeee--cC-CCCeEEEEEC--CC--CCEEEEEeCCCcEEEEeCCCCC--eE-------------Eeecc
Q psy15612          1 MYLQSVSPGRQLQQH--DF-SSQIFSLGYC--PS--GEWLAVGMENSNVEVLHALKPD--KY-------------QLHLH   58 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~-~~~v~~~~~~--~~--~~~l~~~~~~~~v~~~~~~~~~--~~-------------~~~~~   58 (131)
                      +.+|+.++++..+++  +. .-.+..+.|-  |+  ..+..++..+...+++......  ..             .....
T Consensus       231 lhvy~w~~~~~~QtidL~~~gllpleiRfLh~p~~~~~fvg~Al~s~i~~~~k~~~~tws~~~visvp~~kv~~w~~~eM  310 (476)
T KOG0918|consen  231 LHVYQWSPGELKQTIDLGDTGLLPLEIRFLHNPSKATGFVGCALSSNIFRFFKNSDDTWSAEVVISVPPLKVENWILPEM  310 (476)
T ss_pred             eEEEecCCccceeEEecCCCCcceEEeeeccCCCcccceeeeeccCCceeeeeccccccceeEEEecCccccccccCccc
Confidence            367888888887777  22 3346777773  33  2344444445555555433221  10             11234


Q ss_pred             ccceEEEEEccCCCEEEEeCC-CCeEEEeeCCCCce
Q psy15612         59 ESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPYGAS   93 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~   93 (131)
                      ++-|.++-.|-|.++++.+.+ .|.|+-||+.+...
T Consensus       311 P~LITDilISmDDRFLYvs~WLHGDirQYdIsDP~n  346 (476)
T KOG0918|consen  311 PGLITDILISLDDRFLYVSNWLHGDIRQYDISDPKN  346 (476)
T ss_pred             chhhheeEEeecCcEEEEEeeeecceeeeccCCCCC
Confidence            566888989999999887755 56788888775543

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=91.10  E-value=4.5  Score=29.34  Aligned_cols=65  Identities=14%  Similarity=0.143  Sum_probs=39.3

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCeEEeeccccce-------------EEEEEcc--CCCEEEEeCC----------CCeEE
Q psy15612         30 GEWLAVGMENSNVEVLHALKPDKYQLHLHESCV-------------LSLRFAA--CGKWFVSTGK----------DNLLN   84 (131)
Q Consensus        30 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v-------------~~~~~~~--~~~~~~~~~~----------~~~i~   84 (131)
                      +..++.++.|+.+.-.|.++++..--....+.+             ....-+|  .+..++.++.          ++.|+
T Consensus       260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~  339 (764)
T TIGR03074       260 ARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIR  339 (764)
T ss_pred             CCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEE
Confidence            447778888999999999988854221211111             0111122  1334444432          57799


Q ss_pred             EeeCCCCceE
Q psy15612         85 AWRTPYGASI   94 (131)
Q Consensus        85 ~w~~~~~~~~   94 (131)
                      -+|..+|+.+
T Consensus       340 A~Da~TGkl~  349 (764)
T TIGR03074       340 AFDVNTGALV  349 (764)
T ss_pred             EEECCCCcEe
Confidence            9999999988

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PRK10115 protease 2; Provisional

Probab=90.04  E-value=5.5  Score=28.53  Aligned_cols=57  Identities=5%  Similarity=-0.165  Sum_probs=36.7

Q ss_pred             ceEEEEEccCCCEEEEeCC-C----CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612         61 CVLSLRFAACGKWFVSTGK-D----NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        61 ~v~~~~~~~~~~~~~~~~~-~----~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                      .+..+.++|||++++.+.. +    ..+++.|+.+|+.+...-.... ..++|.++++.|+-.
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~-~~~~w~~D~~~~~y~  189 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE-PSFVWANDSWTFYYV  189 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc-eEEEEeeCCCEEEEE
Confidence            4667889999998876522 2    3488889988864411111111 469999998866544

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=89.94  E-value=2.1  Score=23.67  Aligned_cols=85  Identities=11%  Similarity=0.041  Sum_probs=53.7

Q ss_pred             EEECCCCCEEEEEeCCCcEEEEeCCCCC--------eEEeeccccceEEEEEcc-----CCCEEEEeCCCCeEEEeeCCC
Q psy15612         24 LGYCPSGEWLAVGMENSNVEVLHALKPD--------KYQLHLHESCVLSLRFAA-----CGKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        24 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~i~~w~~~~   90 (131)
                      -+|......|+++...++|.+++.....        ...+..-...|.+++--+     +...|+.++ ...+..||...
T Consensus         4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~   82 (136)
T PF14781_consen    4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVEN   82 (136)
T ss_pred             EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEccc
Confidence            3555566678888888899999875332        112233344555554332     233455555 56688999987


Q ss_pred             CceEEecCCCCCeEEEEEC
Q psy15612         91 GASIFQSKESSSVLSCDIS  109 (131)
Q Consensus        91 ~~~~~~~~~~~~v~~~~~~  109 (131)
                      -.-++.+..++.+.++.+.
T Consensus        83 N~d~Fyke~~DGvn~i~~g  101 (136)
T PF14781_consen   83 NSDLFYKEVPDGVNAIVIG  101 (136)
T ss_pred             CchhhhhhCccceeEEEEE
Confidence            7777766677777777763

>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]

Probab=89.93  E-value=3.1  Score=30.67  Aligned_cols=93  Identities=16%  Similarity=0.265  Sum_probs=51.2

Q ss_pred             eCCCcEEEEeCCCCCe-EEeeccccceEEEEE-ccCCCEEE-------EeCCCCeEEEe----eCCCCceE-Ee-----c
Q psy15612         37 MENSNVEVLHALKPDK-YQLHLHESCVLSLRF-AACGKWFV-------STGKDNLLNAW----RTPYGASI-FQ-----S   97 (131)
Q Consensus        37 ~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~-~~~~~~~~-------~~~~~~~i~~w----~~~~~~~~-~~-----~   97 (131)
                      ..|..+.+|+..++.. +.+..-...|..++. -|..+.++       .......+.++    |.++++.- +.     .
T Consensus        99 T~dnkLiLWnynn~neyq~idd~shtIlkVkLvrPkantFvs~i~hlL~vAT~~e~~ilgvs~d~~T~Els~fnTgl~vs  178 (1263)
T COG5308          99 TNDNKLILWNYNNSNEYQEIDDFSHTILKVKLVRPKANTFVSRISHLLFVATEKEVMILGVSKDTKTGELSLFNTGLVVS  178 (1263)
T ss_pred             EcCCEEEEEecCCCcchhhhhhhhhheeEEEEeccCCcccHHhhhhhhhhhhhheeeEEEEEeccccceeEEEecceEEe
Confidence            4577899999986553 222222233333332 23322221       11112223333    44455544 21     2


Q ss_pred             CCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         98 KESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      ..+-.|.|+.-+.+|+.+.+|..|  ..+|.+.|
T Consensus       179 vqGinV~civs~e~GrIFf~g~~d--~nvyEl~Y  210 (1263)
T COG5308         179 VQGINVRCIVSEEDGRIFFGGEND--PNVYELVY  210 (1263)
T ss_pred             ccCceeEEEEeccCCcEEEecCCC--CCeEEEEE
Confidence            245678888888889988887666  88999876

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=89.55  E-value=4.8  Score=27.14  Aligned_cols=128  Identities=13%  Similarity=0.129  Sum_probs=59.7

Q ss_pred             EEeCCCCceeeeecC----CCCeEEEEECCCCCEEEEEeC--------------------CCcEEEEeCCCCCeEE-eec
Q psy15612          3 LQSVSPGRQLQQHDF----SSQIFSLGYCPSGEWLAVGME--------------------NSNVEVLHALKPDKYQ-LHL   57 (131)
Q Consensus         3 iwd~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~--------------------~~~v~~~~~~~~~~~~-~~~   57 (131)
                      +.|-++.+.......    ..--+.+-|.|..+.+++...                    ..++.+||+.+.+..+ +.-
T Consensus       161 llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idL  240 (461)
T PF05694_consen  161 LLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDL  240 (461)
T ss_dssp             EE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES
T ss_pred             EEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEec
Confidence            445555555544422    223466777787777776432                    3579999999888643 322


Q ss_pred             --cccceEEEEEccC--CCE-EEEeCCCCeEEEe-eCCCCceEE----ecC------------------CCCCeEEEEEC
Q psy15612         58 --HESCVLSLRFAAC--GKW-FVSTGKDNLLNAW-RTPYGASIF----QSK------------------ESSSVLSCDIS  109 (131)
Q Consensus        58 --~~~~v~~~~~~~~--~~~-~~~~~~~~~i~~w-~~~~~~~~~----~~~------------------~~~~v~~~~~~  109 (131)
                        ....+..++|..+  ..+ ++.+.-..+|..| ....++...    ..+                  .+.-++.+..|
T Consensus       241 g~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iS  320 (461)
T PF05694_consen  241 GEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILIS  320 (461)
T ss_dssp             -TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-
T ss_pred             CCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEc
Confidence              2235677887654  333 3333334444444 324444320    000                  14567899999


Q ss_pred             CCCCEEEEec-CCCcEEEEEee
Q psy15612        110 ADDKYIVTGS-GDKKATVYEVI  130 (131)
Q Consensus       110 ~~~~~l~~~~-~d~~i~vw~~~  130 (131)
                      .|.++|...+ .+|.++.||+.
T Consensus       321 lDDrfLYvs~W~~GdvrqYDIS  342 (461)
T PF05694_consen  321 LDDRFLYVSNWLHGDVRQYDIS  342 (461)
T ss_dssp             TTS-EEEEEETTTTEEEEEE-S
T ss_pred             cCCCEEEEEcccCCcEEEEecC
Confidence            9999987655 48999999974

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG3616|consensus

Probab=89.45  E-value=1.9  Score=31.20  Aligned_cols=33  Identities=12%  Similarity=0.118  Sum_probs=26.5

Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      ...+..+.-+|.|+.++.++.|+.+.+|+....
T Consensus        14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r   46 (1636)
T KOG3616|consen   14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPR   46 (1636)
T ss_pred             cceeeeeeecCCCceEEEEecCCcEEEEeeccc
Confidence            345667777899999999999999999987543

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=89.36  E-value=4.8  Score=26.92  Aligned_cols=36  Identities=11%  Similarity=0.025  Sum_probs=30.3

Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      ...+.++..+|++++.++...-|.|.++|+.++..+
T Consensus       307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vv  342 (415)
T PF14655_consen  307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVV  342 (415)
T ss_pred             CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhh
Confidence            345778999999999999888899999999877665

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=88.70  E-value=4.6  Score=25.98  Aligned_cols=65  Identities=17%  Similarity=0.127  Sum_probs=40.3

Q ss_pred             cceEEEEEcc-------CCCEEEEeCCCCeEEEeeCCCCceE-----EecCCCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612         60 SCVLSLRFAA-------CGKWFVSTGKDNLLNAWRTPYGASI-----FQSKESSSVLSCDISADDKYIVTGSGDKKA  124 (131)
Q Consensus        60 ~~v~~~~~~~-------~~~~~~~~~~~~~i~~w~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  124 (131)
                      ..+..+.|..       +|.+++..-..+.|....+..+...     .......++..+++.|||.++++...+|+|
T Consensus       253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~i  329 (331)
T PF07995_consen  253 SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKI  329 (331)
T ss_dssp             --EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTE
T ss_pred             cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeE
Confidence            4555666652       3556666665667777776544322     233455589999999999998888778875

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=88.68  E-value=1.9  Score=29.63  Aligned_cols=33  Identities=9%  Similarity=0.017  Sum_probs=25.6

Q ss_pred             CeEEEEECC----CCCEEEEEeCCCcEEEEeCCCCCe
Q psy15612         20 QIFSLGYCP----SGEWLAVGMENSNVEVLHALKPDK   52 (131)
Q Consensus        20 ~v~~~~~~~----~~~~l~~~~~~~~v~~~~~~~~~~   52 (131)
                      .....+.++    +..++++.+.|+++++||+.++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~  252 (547)
T PF11715_consen  216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQC  252 (547)
T ss_dssp             -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCE
T ss_pred             ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeE
Confidence            455566666    677899999999999999999886

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>TIGR03032 conserved hypothetical protein TIGR03032

Probab=87.56  E-value=5.7  Score=25.59  Aligned_cols=52  Identities=13%  Similarity=0.063  Sum_probs=37.1

Q ss_pred             EEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612         64 SLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                      +..|+ +|+..++-+..+.+.-+|..+|+......-++....++|.  |++++++
T Consensus       207 SPRWh-dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~--G~llvVg  258 (335)
T TIGR03032       207 SPRWY-QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFA--GDFAFVG  258 (335)
T ss_pred             CCcEe-CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCccccee--CCEEEEE
Confidence            34444 4777777788888998998888777444556677888887  7776554

This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=87.07  E-value=5.2  Score=24.64  Aligned_cols=120  Identities=11%  Similarity=0.114  Sum_probs=63.3

Q ss_pred             EEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCC----CCeEEe---eccccceEEEEEccCC
Q psy15612          3 LQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALK----PDKYQL---HLHESCVLSLRFAACG   71 (131)
Q Consensus         3 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~----~~~~~~---~~~~~~v~~~~~~~~~   71 (131)
                      +||..+++..... ....-+.+-.+-|+|+++.+|+..   ..+++++...    ......   -.....-....--|||
T Consensus        50 ~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG  129 (243)
T PF07250_consen   50 EYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDG  129 (243)
T ss_pred             EEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCC
Confidence            6787776654322 333334445567899999887542   3477777644    111111   1111222234445799


Q ss_pred             CEEEEeCCCCe-EEEeeCCC--CceE---EecC-----CCCCeEEEEECCCCCEEEEecCCC
Q psy15612         72 KWFVSTGKDNL-LNAWRTPY--GASI---FQSK-----ESSSVLSCDISADDKYIVTGSGDK  122 (131)
Q Consensus        72 ~~~~~~~~~~~-i~~w~~~~--~~~~---~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~  122 (131)
                      +.++.++.... ..+|....  ....   ++..     ...--..+...|+|++++.+..+.
T Consensus       130 ~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s  191 (243)
T PF07250_consen  130 RVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS  191 (243)
T ss_pred             CEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc
Confidence            99988877643 44554421  1111   1111     111123566789999998887643

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>smart00564 PQQ beta-propeller repeat

Probab=86.95  E-value=1.2  Score=17.34  Aligned_cols=22  Identities=18%  Similarity=0.114  Sum_probs=17.6

Q ss_pred             EEEEeCCCCeEEEeeCCCCceE
Q psy15612         73 WFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      .++.++.++.+..+|..+|+.+
T Consensus         8 ~v~~~~~~g~l~a~d~~~G~~~   29 (33)
T smart00564        8 TVYVGSTDGTLYALDAKTGEIL   29 (33)
T ss_pred             EEEEEcCCCEEEEEEcccCcEE
Confidence            4667778899999999888765

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>KOG2280|consensus

Probab=86.19  E-value=11  Score=27.38  Aligned_cols=50  Identities=4%  Similarity=0.088  Sum_probs=36.4

Q ss_pred             CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612         40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~   90 (131)
                      ..+++|+..+....++......+..+.|+.+.. +++...+|.+.++++..
T Consensus        64 ~~I~If~~sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~g  113 (829)
T KOG2280|consen   64 PYIRIFNISGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLLG  113 (829)
T ss_pred             eeEEEEeccccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecch
Confidence            347888887766655444445888999997655 55667899999999863

>KOG2247|consensus

Probab=85.93  E-value=0.28  Score=32.95  Aligned_cols=52  Identities=10%  Similarity=0.089  Sum_probs=41.0

Q ss_pred             EEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEE
Q psy15612         24 LGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFV   75 (131)
Q Consensus        24 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~   75 (131)
                      +.|++....++.+...+.+.+++-.+.+.....+ |...+.+.++.+.+..+.
T Consensus       123 l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil  175 (615)
T KOG2247|consen  123 LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVIL  175 (615)
T ss_pred             HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeee
Confidence            7788888888888889999999988776533334 888899999998766544

>PHA02790 Kelch-like protein; Provisional

Probab=85.85  E-value=8.9  Score=26.14  Aligned_cols=94  Identities=11%  Similarity=-0.006  Sum_probs=47.9

Q ss_pred             CCCEEEEEeCCC---cEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC---C
Q psy15612         29 SGEWLAVGMENS---NVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK---E   99 (131)
Q Consensus        29 ~~~~l~~~~~~~---~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~---~   99 (131)
                      +|+..+.|+.++   .+..||..+..-.....   .......+  .-+++..+.|+   ....||..+.+......   .
T Consensus       362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~--~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~  436 (480)
T PHA02790        362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCAL--VFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYP  436 (480)
T ss_pred             CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEE--EECCEEEEECC---ceEEecCCCCcEeEcCCCCCC
Confidence            566667766543   46678887665433221   11111122  23455555553   36778988877763322   1


Q ss_pred             CCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612        100 SSSVLSCDISADDKYIVTGSGD-----KKATVYEV  129 (131)
Q Consensus       100 ~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~  129 (131)
                      ......+.  -+++..+.|+.+     ..+..||.
T Consensus       437 r~~~~~~v--~~~~IYviGG~~~~~~~~~ve~Yd~  469 (480)
T PHA02790        437 RDNPELII--VDNKLLLIGGFYRGSYIDTIEVYNN  469 (480)
T ss_pred             ccccEEEE--ECCEEEEECCcCCCcccceEEEEEC
Confidence            22222222  256777777653     24666664

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=85.46  E-value=7.1  Score=24.65  Aligned_cols=71  Identities=8%  Similarity=-0.009  Sum_probs=47.7

Q ss_pred             CCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeC------CCCeEEEeeCCCCceEEecC-----CCCCeEEE
Q psy15612         39 NSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTG------KDNLLNAWRTPYGASIFQSK-----ESSSVLSC  106 (131)
Q Consensus        39 ~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~------~~~~i~~w~~~~~~~~~~~~-----~~~~v~~~  106 (131)
                      ...+++||..+.+-..+ ..-.+.|..+.|..+.+.++.|.      ....+..||..+........     -++++..+
T Consensus        15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~   94 (281)
T PF12768_consen   15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTAL   94 (281)
T ss_pred             CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEE
Confidence            34589999887775443 33567899999986666666552      34568889988777653222     35777777


Q ss_pred             EEC
Q psy15612        107 DIS  109 (131)
Q Consensus       107 ~~~  109 (131)
                      .+.
T Consensus        95 ~~~   97 (281)
T PF12768_consen   95 TFI   97 (281)
T ss_pred             Eee
Confidence            664

>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]

Probab=85.19  E-value=9.4  Score=25.84  Aligned_cols=76  Identities=5%  Similarity=-0.008  Sum_probs=45.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-cccceEEEEEcc--CCCEEEEeCCCCe--EEEeeCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-HESCVLSLRFAA--CGKWFVSTGKDNL--LNAWRTPY   90 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~~~~~~~--i~~w~~~~   90 (131)
                      +..++|++++|..|-.++++--.-..+.+.|+...+..++.+ -+-+-.+--.+|  .+..+-.|..++.  |.+||+.+
T Consensus       425 ~~gERIYAvRf~gdv~yiVTfrqtDPlfviDlsNPenPkvlGeLKIPGfS~YLHpigen~~lGvG~~~g~vKiSLFdiSd  504 (603)
T COG4880         425 APGERIYAVRFVGDVLYIVTFRQTDPLFVIDLSNPENPKVLGELKIPGFSEYLHPIGENRLLGVGAYQGGVKISLFDISD  504 (603)
T ss_pred             CCCceEEEEEEeCceEEEEEEeccCceEEEEcCCCCCCceeEEEecCCchhhccccCCCcEEEeecccCCceEEEEeccC
Confidence            567889999998887788887666678888998766322111 011111222344  3445556665665  56788764


Q ss_pred             C
Q psy15612         91 G   91 (131)
Q Consensus        91 ~   91 (131)
                      .
T Consensus       505 l  505 (603)
T COG4880         505 L  505 (603)
T ss_pred             C
Confidence            3

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=85.11  E-value=5.4  Score=27.59  Aligned_cols=58  Identities=14%  Similarity=0.183  Sum_probs=42.7

Q ss_pred             CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeC
Q psy15612         30 GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRT   88 (131)
Q Consensus        30 ~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~   88 (131)
                      ..+++.++..|.+++||--..+. ..+++-...|..+..+.+|+++++.+.. .+.+-|+
T Consensus       573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~  631 (776)
T COG5167         573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDV  631 (776)
T ss_pred             CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEec
Confidence            44788899999999999765553 4456667788899999999998776643 4444554

>KOG1897|consensus

Probab=85.01  E-value=14  Score=27.73  Aligned_cols=103  Identities=14%  Similarity=0.049  Sum_probs=57.6

Q ss_pred             CCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccC--CC----EEEEeCCCCeEEEe-eCCCCceE--E
Q psy15612         27 CPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAAC--GK----WFVSTGKDNLLNAW-RTPYGASI--F   95 (131)
Q Consensus        27 ~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~--~~----~~~~~~~~~~i~~w-~~~~~~~~--~   95 (131)
                      +.+...++.++.++.+...++....++..  ......+.|+.++|-  ++    .++.|.++..+.+. -..+...+  .
T Consensus       496 ~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~  575 (1096)
T KOG1897|consen  496 SANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHE  575 (1096)
T ss_pred             eecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeee
Confidence            33444555555555555555554443222  233567889999973  22    57778776654433 33334433  2


Q ss_pred             ecCC---CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         96 QSKE---SSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        96 ~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ....   +..+.-..+-.+..+|.++..||.+.-+.+
T Consensus       576 ~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~  612 (1096)
T KOG1897|consen  576 QLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVL  612 (1096)
T ss_pred             ccCCCccchheeeEEeeccceEEEEEcCCceEEEEEE
Confidence            2222   333444445556788889999998776654

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=84.96  E-value=5.6  Score=29.12  Aligned_cols=89  Identities=11%  Similarity=0.080  Sum_probs=48.7

Q ss_pred             EEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCeEEe---eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612         22 FSLGYCPSGEWLAVGMENS-----NVEVLHALKPDKYQL---HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        22 ~~~~~~~~~~~l~~~~~~~-----~v~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~   93 (131)
                      ..+.|-|+|..+++-..|+     .|..+...+-+...+   .+.......++|+.....+ .....+.+.+|...+-..
T Consensus       250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vl-av~~~n~~~lwttkNyhW  328 (1243)
T COG5290         250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVL-AVAEGNLLKLWTTKNYHW  328 (1243)
T ss_pred             hccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHH-HHhhcceEEEEEccceEE
Confidence            4588999999998865443     355554433221111   1222334455665433333 234467789998876655


Q ss_pred             E-EecCCCCCeEEEEECCC
Q psy15612         94 I-FQSKESSSVLSCDISAD  111 (131)
Q Consensus        94 ~-~~~~~~~~v~~~~~~~~  111 (131)
                      - .....-..+.-+.|+|.
T Consensus       329 YLK~e~~ip~~s~vkwhpe  347 (1243)
T COG5290         329 YLKVERQIPGISYVKWHPE  347 (1243)
T ss_pred             EEEEeecCCCcceeeeccc
Confidence            4 22233445566778875

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=84.77  E-value=8  Score=24.64  Aligned_cols=27  Identities=11%  Similarity=-0.028  Sum_probs=16.6

Q ss_pred             CCCCEEEEEeCCC----cEEEEeCCCCCeEE
Q psy15612         28 PSGEWLAVGMENS----NVEVLHALKPDKYQ   54 (131)
Q Consensus        28 ~~~~~l~~~~~~~----~v~~~~~~~~~~~~   54 (131)
                      .++++.+.|+.++    .+..||..+.+-..
T Consensus       170 ~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~  200 (323)
T TIGR03548       170 LQNELYVFGGGSNIAYTDGYKYSPKKNQWQK  200 (323)
T ss_pred             ECCEEEEEcCCCCccccceEEEecCCCeeEE
Confidence            3566667776543    25678887766433

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>KOG1520|consensus

Probab=84.06  E-value=9.8  Score=25.10  Aligned_cols=100  Identities=9%  Similarity=-0.013  Sum_probs=53.2

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc-----ccceEEEEEccCCCEEEE-----------------
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH-----ESCVLSLRFAACGKWFVS-----------------   76 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~-----------------   76 (131)
                      ++...++|...+.-|+.++.-.-+...+..++....+..+     -....++...++|....+                 
T Consensus       115 GRPLGl~f~~~ggdL~VaDAYlGL~~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~~g~vyFTDSSsk~~~rd~~~a~l~  194 (376)
T KOG1520|consen  115 GRPLGIRFDKKGGDLYVADAYLGLLKVGPEGGLAELLADEAEGKPFKFLNDLDIDPEGVVYFTDSSSKYDRRDFVFAALE  194 (376)
T ss_pred             CCcceEEeccCCCeEEEEecceeeEEECCCCCcceeccccccCeeeeecCceeEcCCCeEEEeccccccchhheEEeeec
Confidence            6788899988875555554433344445554442111110     011223333343332222                 


Q ss_pred             eCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe
Q psy15612         77 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                      +..+|.+.-||..+.....+...-.....++.||++.+++.+
T Consensus       195 g~~~GRl~~YD~~tK~~~VLld~L~F~NGlaLS~d~sfvl~~  236 (376)
T KOG1520|consen  195 GDPTGRLFRYDPSTKVTKVLLDGLYFPNGLALSPDGSFVLVA  236 (376)
T ss_pred             CCCccceEEecCcccchhhhhhcccccccccCCCCCCEEEEE
Confidence            223455666666655544444555667789999999987654

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=83.96  E-value=14  Score=26.94  Aligned_cols=69  Identities=10%  Similarity=0.048  Sum_probs=44.1

Q ss_pred             cceEEEEEcc-CCCEEEEeCCCCeEEEeeCCCCc------eEEecCCC----------CCeEEEEECCCCCEEEEecCCC
Q psy15612         60 SCVLSLRFAA-CGKWFVSTGKDNLLNAWRTPYGA------SIFQSKES----------SSVLSCDISADDKYIVTGSGDK  122 (131)
Q Consensus        60 ~~v~~~~~~~-~~~~~~~~~~~~~i~~w~~~~~~------~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~d~  122 (131)
                      .+..+++|+| +.+.|+.....|.-.+|++....      ........          +.-..+.|.++.+.|+..+. .
T Consensus       146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~  224 (765)
T PF10214_consen  146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-S  224 (765)
T ss_pred             CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-C
Confidence            4567899999 45689999999999999992111      11111111          22347778777776766654 4


Q ss_pred             cEEEEEe
Q psy15612        123 KATVYEV  129 (131)
Q Consensus       123 ~i~vw~~  129 (131)
                      .+.++|+
T Consensus       225 ~l~~~d~  231 (765)
T PF10214_consen  225 KLMLIDF  231 (765)
T ss_pred             ceEEEEC
Confidence            5666665

These proteins are found in fungi.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=83.95  E-value=8.8  Score=24.49  Aligned_cols=120  Identities=8%  Similarity=0.090  Sum_probs=68.9

Q ss_pred             Cceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-e-----EEe----ecc-ccceEEEEEccCCCEEE
Q psy15612          9 GRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-K-----YQL----HLH-ESCVLSLRFAACGKWFV   75 (131)
Q Consensus         9 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~-----~~~----~~~-~~~v~~~~~~~~~~~~~   75 (131)
                      |+.+..+  ..-.....+++..++++.++--.++.+.++.+.... .     .++    ..+ ......++|.|....+.
T Consensus       117 GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~  196 (316)
T COG3204         117 GDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLF  196 (316)
T ss_pred             CceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEE
Confidence            4444444  122234456666677777777777888877665432 1     111    112 44577899999988888


Q ss_pred             EeCCCCeEEEeeCCCCc-eE---EecCC-------CCCeEEEEECCCC-CEEEEecCCCcEEEEE
Q psy15612         76 STGKDNLLNAWRTPYGA-SI---FQSKE-------SSSVLSCDISADD-KYIVTGSGDKKATVYE  128 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~-~~---~~~~~-------~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~  128 (131)
                      .+-..+-+.+|.+..+. .+   ....+       -..+..+.|++.. .+++.+.+++.+.-.|
T Consensus       197 ~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd  261 (316)
T COG3204         197 VAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVD  261 (316)
T ss_pred             EEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEe
Confidence            88777777777665333 12   11111       1346777788654 4455555555555444

>KOG1520|consensus

Probab=83.71  E-value=8.3  Score=25.42  Aligned_cols=79  Identities=9%  Similarity=-0.000  Sum_probs=45.8

Q ss_pred             eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC--CCeEEEeeCC--CCceE-EecCCCCCeEEEEECCC
Q psy15612         37 MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK--DNLLNAWRTP--YGASI-FQSKESSSVLSCDISAD  111 (131)
Q Consensus        37 ~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~i~~w~~~--~~~~~-~~~~~~~~v~~~~~~~~  111 (131)
                      ..+|.+..||..+.....+...-.....++.|||+.+++.+-.  .+..+.|=-.  .|... +..+-++..-.+.-+++
T Consensus       196 ~~~GRl~~YD~~tK~~~VLld~L~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~g~k~gt~EvFa~~LPG~PDNIR~~~~  275 (376)
T KOG1520|consen  196 DPTGRLFRYDPSTKVTKVLLDGLYFPNGLALSPDGSFVLVAETTTARIKRYWIKGPKAGTSEVFAEGLPGYPDNIRRDST  275 (376)
T ss_pred             CCccceEEecCcccchhhhhhcccccccccCCCCCCEEEEEeeccceeeeeEecCCccCchhhHhhcCCCCCcceeECCC
Confidence            3456677777776665444444455678999999998877632  2334455322  22222 33334555555666778


Q ss_pred             CCEE
Q psy15612        112 DKYI  115 (131)
Q Consensus       112 ~~~l  115 (131)
                      |.+-
T Consensus       276 G~fW  279 (376)
T KOG1520|consen  276 GHFW  279 (376)
T ss_pred             CCEE
Confidence            8653

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=83.44  E-value=5.4  Score=27.19  Aligned_cols=73  Identities=22%  Similarity=0.159  Sum_probs=43.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeecc-cc----ceE-EEEEccCCCEEEEeCCCCeEEEe-
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHLH-ES----CVL-SLRFAACGKWFVSTGKDNLLNAW-   86 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~~-~~----~v~-~~~~~~~~~~~~~~~~~~~i~~w-   86 (131)
                      ...+.+..+-..|||+.+..-+. .++.++++.+...  +++... ++    .|. .+..-..|..++..+.||.+.-| 
T Consensus       218 ~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWF  296 (733)
T COG4590         218 VPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWF  296 (733)
T ss_pred             CCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeee
Confidence            34567888889999999877655 5788888865543  222111 11    111 11112245667778888887766 


Q ss_pred             eCC
Q psy15612         87 RTP   89 (131)
Q Consensus        87 ~~~   89 (131)
                      |.+
T Consensus       297 dvr  299 (733)
T COG4590         297 DVR  299 (733)
T ss_pred             eee
Confidence            554

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=81.96  E-value=17  Score=26.37  Aligned_cols=73  Identities=14%  Similarity=0.138  Sum_probs=50.8

Q ss_pred             cCCCCeEEEEEC--CCCCEEEEEeCCCcEEEEeCCCC--Ce--EEeeccccceEEEEEccCC---C---EEEEeCCCCeE
Q psy15612         16 DFSSQIFSLGYC--PSGEWLAVGMENSNVEVLHALKP--DK--YQLHLHESCVLSLRFAACG---K---WFVSTGKDNLL   83 (131)
Q Consensus        16 ~~~~~v~~~~~~--~~~~~l~~~~~~~~v~~~~~~~~--~~--~~~~~~~~~v~~~~~~~~~---~---~~~~~~~~~~i   83 (131)
                      ..+..+..++++  ...++||.+++...|.+|-....  +.  .....+...|.++.|-++.   .   ++++++-.|.+
T Consensus       161 ~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v  240 (717)
T PF08728_consen  161 RVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEV  240 (717)
T ss_pred             ecCCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcE
Confidence            455678889988  77888888888888888765442  21  1122355678888887642   2   67777888888


Q ss_pred             EEeeC
Q psy15612         84 NAWRT   88 (131)
Q Consensus        84 ~~w~~   88 (131)
                      .+|++
T Consensus       241 ~~~~I  245 (717)
T PF08728_consen  241 WTFKI  245 (717)
T ss_pred             EEEEE
Confidence            88776

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PLN02153 epithiospecifier protein

Probab=81.79  E-value=11  Score=24.20  Aligned_cols=65  Identities=15%  Similarity=0.090  Sum_probs=33.9

Q ss_pred             CCCEEEEEeCC-----------CcEEEEeCCCCCeEEeeccc-----cceEEEEEccCCCEEEEeCC-------------
Q psy15612         29 SGEWLAVGMEN-----------SNVEVLHALKPDKYQLHLHE-----SCVLSLRFAACGKWFVSTGK-------------   79 (131)
Q Consensus        29 ~~~~l~~~~~~-----------~~v~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~-------------   79 (131)
                      ++++++.|+.+           ..+.+||..+..-..+....     ..-..+.. -+++..+.++.             
T Consensus       137 ~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~  215 (341)
T PLN02153        137 ENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYE  215 (341)
T ss_pred             CCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCcccee
Confidence            45666666543           24677888776543332111     11112221 24555554432             


Q ss_pred             CCeEEEeeCCCCceE
Q psy15612         80 DNLLNAWRTPYGASI   94 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~   94 (131)
                      .+.+.+||..+.+..
T Consensus       216 ~~~v~~yd~~~~~W~  230 (341)
T PLN02153        216 SNAVQFFDPASGKWT  230 (341)
T ss_pred             cCceEEEEcCCCcEE
Confidence            245888998877766

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=81.18  E-value=10  Score=23.39  Aligned_cols=46  Identities=11%  Similarity=0.164  Sum_probs=29.9

Q ss_pred             EEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-C--CcEEEEE
Q psy15612         83 LNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-D--KKATVYE  128 (131)
Q Consensus        83 i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d--~~i~vw~  128 (131)
                      -.+||+.+.+.. ...........-++-++|+++.+|+. +  ..+++++
T Consensus        48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~   97 (243)
T PF07250_consen   48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFT   97 (243)
T ss_pred             EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEe
Confidence            457898888776 33334444555567789999988765 3  3466655

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PRK13684 Ycf48-like protein; Provisional

Probab=81.03  E-value=12  Score=24.14  Aligned_cols=103  Identities=13%  Similarity=0.084  Sum_probs=56.6

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEE-EeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEV-LHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-   94 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~-~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-   94 (131)
                      ...+..+.+.|++..++++. .|.+.. .+-....-... ......+..+.+.++++.++.+. .+.+.+=....|..- 
T Consensus       172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~-~G~~~~~s~d~G~sW~  249 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLAR-GGQIRFNDPDDLESWS  249 (334)
T ss_pred             cceEEEEEECCCCeEEEEeC-CceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEec-CCEEEEccCCCCCccc
Confidence            45678888899887665554 454432 22221122222 23345688899999988776654 565543223333322 


Q ss_pred             E-ecC---CCCCeEEEEECCCCCEEEEecCCCc
Q psy15612         95 F-QSK---ESSSVLSCDISADDKYIVTGSGDKK  123 (131)
Q Consensus        95 ~-~~~---~~~~v~~~~~~~~~~~l~~~~~d~~  123 (131)
                      . ..+   ....+..+.+.|+++.++.+ .+|.
T Consensus       250 ~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~  281 (334)
T PRK13684        250 KPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGT  281 (334)
T ss_pred             cccCCccccccceeeEEEcCCCCEEEEc-CCCe
Confidence            1 111   22456788888887766554 3443

>PF01011 PQQ: PQQ enzyme repeat family

Probab=80.05  E-value=3.3  Score=17.00  Aligned_cols=21  Identities=19%  Similarity=0.167  Sum_probs=17.8

Q ss_pred             EEEeCCCCeEEEeeCCCCceE
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      ++.++.++.+.-.|.++|+.+
T Consensus         3 v~~~~~~g~l~AlD~~TG~~~   23 (38)
T PF01011_consen    3 VYVGTPDGYLYALDAKTGKVL   23 (38)
T ss_dssp             EEEETTTSEEEEEETTTTSEE
T ss_pred             EEEeCCCCEEEEEECCCCCEE
Confidence            455688999999999999988

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	131
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		3e-65
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		3e-04
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		3e-04
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		6e-04
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		6e-04

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score =  242 bits (618), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 115/123 (93%), Positives = 119/123 (96%)
Query: 9   GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFA 68
           GRQLQQHDF+SQIFSLGYCP+GEWLAVGME+SNVEVLH  KPDKYQLHLHESCVLSL+FA
Sbjct: 215 GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFA 274
Query: 69  ACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE 128
            CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYE
Sbjct: 275 YCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Query: 129 VIY 131
           VIY
Sbjct: 335 VIY 337

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 58  HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISADDKYIV 116
           H   V    F+  G+   S G D  L  ++   G  +   K     VL C  S+DD YI 
Sbjct: 621 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 680
Query: 117 TGSGDKKATVYE 128
           T S DKK  +++
Sbjct: 681 TCSADKKVKIWD 692

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 58  HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISADDKYIV 116
           H   V    F+  G+   S G D  L  ++   G  +   K     VL C  S+DD YI 
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 673
Query: 117 TGSGDKKATVYE 128
           T S DKK  +++
Sbjct: 674 TCSADKKVKIWD 685

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Query: 1   MYLQSVSPGRQLQQHDFSS-QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLH 58
           + L  +  G+Q++  D      ++L + P  ++LA G     V +       K Y L   
Sbjct: 104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR 163
Query: 59  ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISADDKYIVT 117
              +LS+ ++  GK+  S   D ++N +    G  +      +  + S   S D + +VT
Sbjct: 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT 223
Query: 118 GSGDKKATVYEV 129
            S D    +Y+V
Sbjct: 224 ASDDGYIKIYDV 235

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	131
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.98
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.98
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.97
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.97
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.97
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.97
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.97
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.97
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.97
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.97
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.97
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.97
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.97
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.97
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.97
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.97
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.97
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.97
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.97
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.97
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.96
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.96
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.96
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.96
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.96
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.96
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.96
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.96
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.96
2pm7_B	297	Protein transport protein SEC13, protein transport	99.96
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.96
2pm7_B	297	Protein transport protein SEC13, protein transport	99.96
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.96
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.96
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.96
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.95
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.95
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.95
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.95
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.95
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.95
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.95
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.95
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.95
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.95
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.95
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.95
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.95
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.95
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.95
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.95
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.95
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.95
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.95
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.95
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.95
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.95
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.94
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.94
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.94
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.94
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.94
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.94
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.94
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.94
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.94
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.94
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.94
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.94
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.94
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.94
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.94
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.94
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.94
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.94
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.94
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.94
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.94
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.94
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.94
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.94
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.94
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.94
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.94
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.93
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.93
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.93
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.93
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.93
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.93
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.93
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.93
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.93
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.93
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.93
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.93
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.93
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.93
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.93
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.92
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.92
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.92
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.92
3jro_A	753	Fusion protein of protein transport protein SEC13	99.92
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.92
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.92
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.92
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.92
3jro_A	753	Fusion protein of protein transport protein SEC13	99.92
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.92
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.91
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.91
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.91
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.91
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.91
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.91
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.91
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.91
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.9
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.9
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.9
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.9
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.9
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.89
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.89
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.89
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.89
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.88
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.86
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.84
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.82
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.81
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.8
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.8
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.8
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.79
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.79
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.79
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.78
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.78
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.78
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.78
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.77
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.77
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.76
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.75
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.75
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.73
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.73
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.72
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.72
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.72
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.71
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.71
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.71
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.71
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.7
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.68
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.68
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.67
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.66
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.64
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.64
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.62
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.61
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.61
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.58
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.57
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.55
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.55
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.55
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.55
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.54
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.51
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.51
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.51
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.49
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.49
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.49
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.48
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.47
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.46
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.45
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.45
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.43
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.42
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.41
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.39
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.39
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.39
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.36
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.36
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.36
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.31
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.31
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.3
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.3
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.28
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.27
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.24
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.23
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.22
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.21
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.19
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.19
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.18
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.15
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.14
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.13
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.13
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.11
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.09
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.07
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.06
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.05
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.04
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.03
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.01
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.0
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.94
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.92
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.87
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.86
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.86
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.83
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.82
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.8
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.8
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.79
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.79
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.78
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.78
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.67
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.67
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.64
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.63
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.63
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.57
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.55
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.54
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.54
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.53
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.51
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.44
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.39
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.39
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.37
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.35
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.24
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.24
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.21
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.2
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.19
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.19
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.19
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.16
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.11
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.08
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.06
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.03
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.99
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.92
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.88
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.87
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.85
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.84
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.83
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.78
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.77
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.75
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.75
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.74
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.71
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.67
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.61
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.56
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.52
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.5
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.5
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.49
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.49
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.49
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.49
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.45
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.45
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.38
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.33
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.3
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.27
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.22
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.2
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.19
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.14
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.09
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	97.09
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	97.03
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	97.02
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.0
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.98
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.9
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.73
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.72
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.72
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.62
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.58
4a2l_A	795	BT_4663, two-component system sensor histidine kin	96.56
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.43
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.4
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.39
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	96.36
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.08
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	96.05
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	95.93
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	95.76
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	95.39
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	95.31
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	95.3
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	95.27
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	95.06
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	95.02
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	94.99
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	94.83
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	94.76
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	94.38
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	94.33
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	94.18
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	94.15
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	94.14
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	93.86
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	93.8
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	93.66
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	93.34
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	93.03
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	92.64
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	92.16
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	91.68
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	91.68
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	91.5
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	91.3
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	90.61
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	90.48
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	90.37
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	89.96
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	89.93
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	89.1
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	88.79
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	87.66
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	84.7
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	84.35
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	83.31
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	81.31

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.7e-31  Score=162.27  Aligned_cols=130  Identities=18%  Similarity=0.319  Sum_probs=121.1

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ +|...|.+++|+|++++|++++.|+.|++||+.+... ..+.+|...|.+++|+|+++++++++
T Consensus       188 i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s  267 (321)
T 3ow8_A          188 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS  267 (321)
T ss_dssp             EEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe
Confidence            589999999998888 7899999999999999999999999999999988775 56788999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+.+++.+ ....|...|.+++|+|++++|++++.|+.|++||.-
T Consensus       268 ~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          268 SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             CCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            9999999999999888 667899999999999999999999999999999964

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.98  E-value=5e-30  Score=156.66  Aligned_cols=130  Identities=22%  Similarity=0.321  Sum_probs=119.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++....+ .+...+.+++|+|++++|++++.|+.|++||+.+++. ..+..|...|.+++|+|+++++++++
T Consensus       146 v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s  225 (321)
T 3ow8_A          146 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS  225 (321)
T ss_dssp             EEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC
T ss_pred             EEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc
Confidence            579999999888777 7778899999999999999999999999999998875 56778999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.|++||+++++.. ...+|...|.+++|+|+++++++++.|++|++||+.
T Consensus       226 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~  278 (321)
T 3ow8_A          226 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG  278 (321)
T ss_dssp             TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence            9999999999988877 677899999999999999999999999999999974

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.98  E-value=2.5e-30  Score=156.85  Aligned_cols=130  Identities=12%  Similarity=0.210  Sum_probs=119.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ .|...|.+++|+|++++|++++.|+.|++||+.+++. ..+.+|...|.+++|+|+++++++++
T Consensus        37 v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs  116 (304)
T 2ynn_A           37 VELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS  116 (304)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred             EEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEEC
Confidence            589999999988887 7888999999999999999999999999999998875 66788999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE--EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||++++...  ...+|...|.+++|+| ++..+++++.|++|++||++
T Consensus       117 ~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~  171 (304)
T 2ynn_A          117 DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG  171 (304)
T ss_dssp             TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETT
T ss_pred             CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence            9999999999887554  5678999999999999 67899999999999999973

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.97  E-value=9.5e-30  Score=156.36  Aligned_cols=128  Identities=17%  Similarity=0.235  Sum_probs=115.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++||+++++....+ +|...|.+++|+|+++.+++++.|+.+++||+++........   +...+.+++|+|+|+++++
T Consensus       208 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~  287 (340)
T 1got_B          208 AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA  287 (340)
T ss_dssp             EEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred             EEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEE
Confidence            589999999988888 799999999999999999999999999999998876533222   3347999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ++.|+.+++||..+++.. ...+|...|.+++|+|+++++++++.|+.|++||
T Consensus       288 g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             ECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            999999999999988877 6778999999999999999999999999999996

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.97  E-value=4e-30  Score=159.48  Aligned_cols=129  Identities=16%  Similarity=0.158  Sum_probs=107.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----------------------------
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----------------------------   52 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----------------------------   52 (131)
                      |++||+++++++..+.|...|.+++|+|+|+++++++.++ +.+|+..++..                            
T Consensus       159 i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~  237 (365)
T 4h5i_A          159 MRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAA  237 (365)
T ss_dssp             EEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEE
T ss_pred             EEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEE
Confidence            5899999999888888888899999999999998887554 44444432210                            


Q ss_pred             -------------------------EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEE
Q psy15612         53 -------------------------YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLS  105 (131)
Q Consensus        53 -------------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~  105 (131)
                                               ..+..|...|.+++|+|||++|++++.|+.|++||+++++.+  .+.+|...|.+
T Consensus       238 s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~  317 (365)
T 4h5i_A          238 SLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITE  317 (365)
T ss_dssp             EESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEE
T ss_pred             ecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEE
Confidence                                     012345667889999999999999999999999999999987  35679999999


Q ss_pred             EEECCCCCEEEEecCCCcEEEEEee
Q psy15612        106 CDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       106 ~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++|+|+|++|++++.|++|+|||+.
T Consensus       318 v~fSpdg~~laS~S~D~tvrvw~ip  342 (365)
T 4h5i_A          318 VTISPDSTYVASVSAANTIHIIKLP  342 (365)
T ss_dssp             EEECTTSCEEEEEETTSEEEEEECC
T ss_pred             EEECCCCCEEEEEeCCCeEEEEEcC
Confidence            9999999999999999999999973

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.97  E-value=2.1e-29  Score=154.79  Aligned_cols=130  Identities=15%  Similarity=0.238  Sum_probs=117.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ +|.+.|.+++|+|+++.+++++.|+.+++||++++.. ..+..|...|.+++|+|+++.+++++
T Consensus       166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s  245 (340)
T 1got_B          166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS  245 (340)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc
Confidence            589999999998888 7999999999999999999999999999999998875 56788999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceEEecC---CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASIFQSK---ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+++++.+....   +...+.+++|+|+++++++++.|+.|++||+.
T Consensus       246 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~  300 (340)
T 1got_B          246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL  300 (340)
T ss_dssp             TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence            99999999999888763332   33579999999999999999999999999963

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.97  E-value=2.1e-29  Score=155.19  Aligned_cols=130  Identities=18%  Similarity=0.166  Sum_probs=112.4

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC-CEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG-KWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~~   74 (131)
                      |++||+++++....+   .+...+.+++|+|+ ++++++|+.|+.|++||+++++. ..+.+|...|.+++|+|++ +++
T Consensus       194 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~l  273 (344)
T 4gqb_B          194 ILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFL  273 (344)
T ss_dssp             EEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCE
T ss_pred             cccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEE
Confidence            689999999888776   35567999999995 56788999999999999998775 6788999999999999998 578


Q ss_pred             EEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         75 VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      ++++.|+.|++||..+++.....+|.+.|.+++|+|+++ ++++++.|++|++|++.
T Consensus       274 asgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~  330 (344)
T 4gqb_B          274 ASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP  330 (344)
T ss_dssp             EEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred             EEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence            999999999999999998877788999999999999986 56789999999999973

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.97  E-value=1.3e-29  Score=159.21  Aligned_cols=130  Identities=17%  Similarity=0.231  Sum_probs=121.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++....+ +|...|.+++|+|++++|++++.|++|++||+.+.++ ..+.+|...|.+++|+|+++++++++
T Consensus       132 i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s  211 (410)
T 1vyh_C          132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS  211 (410)
T ss_dssp             EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE
T ss_pred             EEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence            689999999988888 8999999999999999999999999999999988775 56788999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+.++..+ ...+|...+.+++++|+++++++++.|+.|++||++
T Consensus       212 ~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~  264 (410)
T 1vyh_C          212 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA  264 (410)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence            9999999999999887 667899999999999999999999999999999963

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.97  E-value=6.4e-29  Score=151.58  Aligned_cols=130  Identities=17%  Similarity=0.213  Sum_probs=119.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccC------CCE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAAC------GKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~   73 (131)
                      |++||+++++.+..+ +|...|.+++|+|++..+++++.|+.+++||+.......+.+|...+.++.|+|.      +..
T Consensus        89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~  168 (319)
T 3frx_A           89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT  168 (319)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred             EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence            689999999998887 8999999999999999999999999999999987767778889999999999985      448


Q ss_pred             EEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.+++||+.+++.. ...+|...|.+++|+|+++++++++.|+.|++||++
T Consensus       169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~  226 (319)
T 3frx_A          169 IISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA  226 (319)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred             EEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence            999999999999999988877 667899999999999999999999999999999974

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.97  E-value=6.5e-29  Score=153.45  Aligned_cols=128  Identities=19%  Similarity=0.296  Sum_probs=115.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-e--ccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-H--LHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++||+++++++..+ .|...|.+++|+|++..+++++.|+.+++||++....... .  .+...+.+++|+|+++++++
T Consensus       222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~  301 (354)
T 2pbi_B          222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA  301 (354)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred             EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence            589999999998888 7899999999999999999999999999999988764332 2  22346889999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ++.|+.+++||+.+++.+ ...+|...|.+++|+|++++|++++.|++|++|+
T Consensus       302 g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          302 GYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             EECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            999999999999988877 6678999999999999999999999999999996

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.97  E-value=3.3e-29  Score=157.31  Aligned_cols=130  Identities=20%  Similarity=0.305  Sum_probs=118.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCC--------------------CCEEEEEeCCCcEEEEeCCCCCe-EEeecc
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPS--------------------GEWLAVGMENSNVEVLHALKPDK-YQLHLH   58 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~--------------------~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~   58 (131)
                      |++||++++++...+ .|...|.+++|+|+                    +.++++++.|+.|++||+.++.+ ..+.+|
T Consensus       258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h  337 (410)
T 1vyh_C          258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH  337 (410)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence            589999999988877 89999999999996                    67899999999999999998875 667889


Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ...|.+++|+|+++++++++.|+.|++||+.+++.+ ....|...|.+++|+|+++++++++.|+.|++|+++
T Consensus       338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence            999999999999999999999999999999988877 667899999999999999999999999999999975

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.97  E-value=1.8e-28  Score=148.83  Aligned_cols=130  Identities=15%  Similarity=0.220  Sum_probs=120.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||..+++....+ .|...|.+++|+|+++.|++++.|+.+++||+.+++. ..+..|...+.++.|+|+++++++++
T Consensus        47 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~  126 (312)
T 4ery_A           47 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS  126 (312)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred             EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence            589999999888877 7899999999999999999999999999999998875 66788999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+++++.. ....|...+.+++|+|+++++++++.|+.|++||++
T Consensus       127 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  179 (312)
T 4ery_A          127 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA  179 (312)
T ss_dssp             TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence            9999999999998887 666788999999999999999999999999999974

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.97  E-value=3.7e-29  Score=154.73  Aligned_cols=130  Identities=15%  Similarity=0.176  Sum_probs=115.3

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC-CEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG-KWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~~   74 (131)
                      |++||+++++....+   .+...+.+++|+|+ +.++++++.|+.|++||+++++. ..+..|...|.+++|+|++ +++
T Consensus       206 v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~l  285 (357)
T 4g56_B          206 ILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFL  285 (357)
T ss_dssp             EEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCE
T ss_pred             eEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEE
Confidence            589999998877654   46678999999997 56788999999999999988775 6678899999999999987 578


Q ss_pred             EEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612         75 VSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++++.|+.|++||+++++.....+|.+.|.+++|+| ++++|++++.|++|++||+.
T Consensus       286 asgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~  342 (357)
T 4g56_B          286 ASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP  342 (357)
T ss_dssp             EEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred             EEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence            899999999999999998887778999999999998 78999999999999999973

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.97  E-value=6.3e-29  Score=153.09  Aligned_cols=130  Identities=15%  Similarity=0.143  Sum_probs=111.8

Q ss_pred             CEEEeCCCCceeeee-----cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC-E
Q psy15612          1 MYLQSVSPGRQLQQH-----DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK-W   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~   73 (131)
                      |++||+++++.+...     +|.+.|.+++|+|++++|++++.|++|++||+.++++ ..+.+|...|.+++|+|++. .
T Consensus       105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~  184 (344)
T 4gqb_B          105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV  184 (344)
T ss_dssp             EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred             EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence            689999988765432     7899999999999999999999999999999998875 66788999999999999875 7


Q ss_pred             EEEeCCCCeEEEeeCCCCceEEe---cCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASIFQ---SKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.|++||+++++....   ..+...+.+++|+|+ ++++++++.|+.|++||++
T Consensus       185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~  245 (344)
T 4gqb_B          185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK  245 (344)
T ss_dssp             EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred             eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence            88999999999999999887722   345677999999985 5688999999999999975

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.97  E-value=1e-28  Score=153.73  Aligned_cols=130  Identities=16%  Similarity=0.280  Sum_probs=112.2

Q ss_pred             CEEEeCC-CCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eecc-------ccceEEEEEccC
Q psy15612          1 MYLQSVS-PGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHLH-------ESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~-~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~-------~~~v~~~~~~~~   70 (131)
                      |++||++ +++.+..+ +|.+.|.+++|+|+++.+++++.|+++++||++++.... +..+       ...+.+++|+|+
T Consensus       230 v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  309 (380)
T 3iz6_a          230 VRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS  309 (380)
T ss_dssp             EEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS
T ss_pred             EEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC
Confidence            5899998 45666666 899999999999999999999999999999999887532 2222       234889999999


Q ss_pred             CCEEEEeCCCCeEEEeeCCCCceE-Ee----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         71 GKWFVSTGKDNLLNAWRTPYGASI-FQ----SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~~~~~~-~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+++++++.|+.+++||..+++.. ..    .+|.+.|.+++|+|++++|++++.|+.|++|++.
T Consensus       310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~  374 (380)
T 3iz6_a          310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS  374 (380)
T ss_dssp             SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred             CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence            999999999999999999988876 22    4688999999999999999999999999999974

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.97  E-value=4.2e-28  Score=151.55  Aligned_cols=130  Identities=19%  Similarity=0.299  Sum_probs=116.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEcc-CCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAA-CGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~   78 (131)
                      |++||+++++.+..+ +|...|.+++|+|++..|++++.|+.+++||+++++......+...+.+++|+| +++++++++
T Consensus       147 i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s  226 (393)
T 1erj_A          147 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGS  226 (393)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEE
T ss_pred             EEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEc
Confidence            689999999988877 899999999999999999999999999999999888655555677899999999 899999999


Q ss_pred             CCCeEEEeeCCCCceE-Ee-------cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQ-------SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+++++.. ..       .+|...|.+++|+|+++++++++.|+.|++||++
T Consensus       227 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~  286 (393)
T 1erj_A          227 LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ  286 (393)
T ss_dssp             TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence            9999999999988776 22       4688999999999999999999999999999974

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.97  E-value=9.3e-28  Score=146.36  Aligned_cols=131  Identities=88%  Similarity=1.381  Sum_probs=123.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      |++||+++++.+..+.+...+.+++|+|+++.+++++.++.+++|++.+.+...+..|...+.+++|+|+++++++++.|
T Consensus       207 i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  286 (337)
T 1gxr_A          207 VRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD  286 (337)
T ss_dssp             EEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCC
Confidence            58999999999888888899999999999999999999999999999998887888899999999999999999999999


Q ss_pred             CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         81 NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        81 ~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      +.+++||+.+++......+...+.+++|+|+++++++++.|+.+++||+.|
T Consensus       287 g~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~  337 (337)
T 1gxr_A          287 NLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY  337 (337)
T ss_dssp             SEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEEC
T ss_pred             CcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEeC
Confidence            999999999998887777899999999999999999999999999999987

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.97  E-value=4.1e-28  Score=158.68  Aligned_cols=130  Identities=14%  Similarity=0.243  Sum_probs=115.7

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee-------ccccceEEEEEccCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH-------LHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~-------~~~~~v~~~~~~~~~   71 (131)
                      |++||.++++....+ +|...|.+++|+|++++|++++.|+++++||+.+++. ..+.       +|...|.+++|+|++
T Consensus       172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg  251 (611)
T 1nr0_A          172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG  251 (611)
T ss_dssp             EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred             EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence            589999988888877 8999999999999999999999999999999988775 3332       689999999999999


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceE--------------------------------------------EecCCCCCeEEEE
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASI--------------------------------------------FQSKESSSVLSCD  107 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~--------------------------------------------~~~~~~~~v~~~~  107 (131)
                      +++++++.|+.+++||+.+++..                                            ...+|...|.+++
T Consensus       252 ~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~  331 (611)
T 1nr0_A          252 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS  331 (611)
T ss_dssp             SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE
Confidence            99999999999999999877653                                            1235788999999


Q ss_pred             ECCCCCEEEEecCCCcEEEEEee
Q psy15612        108 ISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       108 ~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+|+++++++++.|++|++||+.
T Consensus       332 ~spdg~~l~s~s~D~~v~~Wd~~  354 (611)
T 1nr0_A          332 SSADGKTLFSADAEGHINSWDIS  354 (611)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETT
T ss_pred             EeCCCCEEEEEeCCCcEEEEECC
Confidence            99999999999999999999963

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.97  E-value=2.9e-28  Score=147.81  Aligned_cols=119  Identities=14%  Similarity=0.284  Sum_probs=109.8

Q ss_pred             eeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612         12 LQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        12 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~   89 (131)
                      ...+ +|.+.|.+++|+|+++++++++.|+.+++||+.++.. ..+..|...+.+++|+|+++++++++.|+.|++||+.
T Consensus         6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~   85 (304)
T 2ynn_A            6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN   85 (304)
T ss_dssp             EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred             EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence            3445 8999999999999999999999999999999988775 6677889999999999999999999999999999999


Q ss_pred             CCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         90 YGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        90 ~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.+ ....|...|.+++|+|+++++++++.|++|++||++
T Consensus        86 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~  127 (304)
T 2ynn_A           86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE  127 (304)
T ss_dssp             TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGG
T ss_pred             CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECC
Confidence            99887 677899999999999999999999999999999974

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.97  E-value=5e-28  Score=149.01  Aligned_cols=130  Identities=15%  Similarity=0.204  Sum_probs=114.0

Q ss_pred             CEEEeCCCCc--eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      |++||..+++  ++..+ +|...|.+++|+|++++|++++.|+.+++||+.....    ..+..|...|.+++|+|++++
T Consensus        85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  164 (345)
T 3fm0_A           85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL  164 (345)
T ss_dssp             EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred             EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence            5799988764  44555 7999999999999999999999999999999986542    345678999999999999999


Q ss_pred             EEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.+++||..+++..   ...+|...|.+++|+|++++|++++.|++|++||..
T Consensus       165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~  224 (345)
T 3fm0_A          165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY  224 (345)
T ss_dssp             EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence            999999999999999877643   566799999999999999999999999999999963

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.97  E-value=6.5e-28  Score=148.31  Aligned_cols=128  Identities=23%  Similarity=0.382  Sum_probs=113.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee---ccccceEEEEEccCC-----
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH---LHESCVLSLRFAACG-----   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~-----   71 (131)
                      |++||+++++.+..+ +|...|.+++|+|+++.|++++.|+.+++||+.........   .|...+.+++|+|++     
T Consensus       100 v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  179 (343)
T 2xzm_R          100 LRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANK  179 (343)
T ss_dssp             EEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSC
T ss_pred             EEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccc
Confidence            689999999988887 89999999999999999999999999999999854433332   678889999999987     


Q ss_pred             -----CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         72 -----KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        72 -----~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                           +++++++.|+.+++||.. ++.. ....|...|.+++|+|++++|++++.|+.|++||+
T Consensus       180 ~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~  242 (343)
T 2xzm_R          180 VQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI  242 (343)
T ss_dssp             CCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred             cCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence                 789999999999999954 4444 66789999999999999999999999999999997

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.96  E-value=8.9e-28  Score=147.13  Aligned_cols=130  Identities=18%  Similarity=0.234  Sum_probs=106.1

Q ss_pred             CEEEeCCCC--ceeeee--c-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-------C-eEEeeccccceEEEEE
Q psy15612          1 MYLQSVSPG--RQLQQH--D-FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-------D-KYQLHLHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~--~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-------~-~~~~~~~~~~v~~~~~   67 (131)
                      |++||++++  +....+  . |...|.+++|+|++++|++++.|+.|++|++...       + ...+.+|...|.+++|
T Consensus        36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~  115 (330)
T 2hes_X           36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW  115 (330)
T ss_dssp             EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEE
T ss_pred             EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEE
Confidence            589999875  344444  3 8899999999999999999999999999998532       1 2456789999999999


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCC----ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYG----ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~----~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|+++++++++.|+.+++||+...    +.+ ...+|...|.+++|+|++++|++++.|++|++||+.
T Consensus       116 sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~  183 (330)
T 2hes_X          116 SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDY  183 (330)
T ss_dssp             CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEE
T ss_pred             CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence            999999999999999999999532    233 566799999999999999999999999999999874

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.96  E-value=6e-28  Score=148.65  Aligned_cols=130  Identities=14%  Similarity=0.219  Sum_probs=113.5

Q ss_pred             CEEEeCCCCceee--ee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQ--QH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~--~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      |++||+++++...  .+  +|...|.+++|+|++++|++++.|+.+++|+.....   ...+.+|...|.+++|+|++++
T Consensus        40 i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~  119 (345)
T 3fm0_A           40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL  119 (345)
T ss_dssp             EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSE
T ss_pred             EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCE
Confidence            6899998876432  22  789999999999999999999999999999998765   2556789999999999999999


Q ss_pred             EEEeCCCCeEEEeeCCCCce---E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGAS---I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~---~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.+++||+.++..   . ....|...|.+++|+|+++++++++.|+.|++||++
T Consensus       120 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~  180 (345)
T 3fm0_A          120 LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE  180 (345)
T ss_dssp             EEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred             EEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence            99999999999999987643   2 456789999999999999999999999999999974

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.96  E-value=1.4e-27  Score=144.94  Aligned_cols=130  Identities=21%  Similarity=0.353  Sum_probs=118.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ .|...|.+++|+|+++.+++++.|+.+++||+++++. ..+..|...+.++.|+|+++++++++
T Consensus        89 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  168 (312)
T 4ery_A           89 LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS  168 (312)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence            589999999988887 7899999999999999999999999999999998875 56778889999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+++++.+  ....+...+..++|+|+++++++++.|+.|++||++
T Consensus       169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~  222 (312)
T 4ery_A          169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS  222 (312)
T ss_dssp             TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred             CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence            9999999999998877  334567789999999999999999999999999974

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.96  E-value=4.8e-28  Score=156.86  Aligned_cols=126  Identities=24%  Similarity=0.343  Sum_probs=113.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++||.. ++.+..+ +|...|.+++|+|++++|++++.|+.|++|+........+.+|...|.+++|+|+++++++++.
T Consensus       450 v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~  528 (577)
T 2ymu_A          450 VKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD  528 (577)
T ss_dssp             EEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred             EEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence            5799965 5566555 8999999999999999999999999999999765556778899999999999999999999999


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      |+.|++||. +++.+ ...+|.+.|.+++|+|++++|++++.|+.|++||
T Consensus       529 dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          529 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             TSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             cCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            999999996 46665 6778999999999999999999999999999997

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.96  E-value=1.6e-27  Score=147.23  Aligned_cols=130  Identities=22%  Similarity=0.271  Sum_probs=115.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++||+++++.+..+ +|...|.+++++|  ++..+++++.|+.+++||++++++ ..+..|...|.+++|+|+++.+++
T Consensus       178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s  257 (354)
T 2pbi_B          178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFAS  257 (354)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEE
Confidence            589999999998888 8999999999987  468999999999999999998885 567789999999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceEEe-c--CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASIFQ-S--KESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.|+.+++||+++++.... .  .+...+.+++|+|+++++++++.|+.|++||+.
T Consensus       258 ~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~  314 (354)
T 2pbi_B          258 GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL  314 (354)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence            99999999999998876632 2  234578999999999999999999999999973

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.96  E-value=2.3e-27  Score=145.32  Aligned_cols=130  Identities=14%  Similarity=0.203  Sum_probs=106.9

Q ss_pred             CEEEeCCC-------Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC-C----eEEeeccccceEEEEE
Q psy15612          1 MYLQSVSP-------GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP-D----KYQLHLHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~-------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~-~----~~~~~~~~~~v~~~~~   67 (131)
                      |++||++.       .+.+..+ +|...|.+++|+|++++|++++.|+.|++||+... .    ...+..|...|.+++|
T Consensus        82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~  161 (330)
T 2hes_X           82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW  161 (330)
T ss_dssp             EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred             EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence            58999853       2344555 79999999999999999999999999999999432 2    2456789999999999


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCC--ceE-EecCCCCCeEEEEECCC--CCEEEEecCCCcEEEEEee
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYG--ASI-FQSKESSSVLSCDISAD--DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~--~~~-~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|+++++++++.|+.+++||..++  +.+ ...+|...|.+++|+|+  +.++++++.|++|++||++
T Consensus       162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~  229 (330)
T 2hes_X          162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM  229 (330)
T ss_dssp             CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence            999999999999999999998776  334 56789999999999998  6789999999999999974

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.96  E-value=1.4e-26  Score=141.47  Aligned_cols=129  Identities=14%  Similarity=0.191  Sum_probs=111.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++||+++++.+..+ +|...|.+++|+|++++|++++.|+.+++||+.+.+......+...+..+.|+|++..+ +++.
T Consensus       197 i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~  275 (340)
T 4aow_A          197 VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAAT  275 (340)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEE
T ss_pred             EEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccC
Confidence            589999999988887 89999999999999999999999999999999988865555566789999999987655 5556


Q ss_pred             CCeEEEeeCCCCceE-E---------ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGASI-F---------QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~---------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.+++||++++... .         ...|...|.+++|+|++++|++++.|+.|++||+.
T Consensus       276 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~  336 (340)
T 4aow_A          276 GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT  336 (340)
T ss_dssp             TTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             CCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence            999999999877654 1         23578899999999999999999999999999985

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.96  E-value=6.1e-27  Score=146.32  Aligned_cols=130  Identities=26%  Similarity=0.367  Sum_probs=114.5

Q ss_pred             CEEEeCCCCceeeee-cCC------------------CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeecccc
Q psy15612          1 MYLQSVSPGRQLQQH-DFS------------------SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHES   60 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~------------------~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~   60 (131)
                      +++|++.+++.+..+ .+.                  ..|.+++|+|++++|++++.|+.|++||+.+++. ..+.+|..
T Consensus        87 v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~  166 (393)
T 1erj_A           87 TQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ  166 (393)
T ss_dssp             EEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred             EEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCC
Confidence            479999999887766 222                  1389999999999999999999999999998875 56788999


Q ss_pred             ceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612         61 CVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        61 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|.+++|+|+++.+++++.|+.+++||+++++......+...+.+++|+| +++++++++.|+.|++||++
T Consensus       167 ~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~  237 (393)
T 1erj_A          167 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE  237 (393)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETT
T ss_pred             CEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence            99999999999999999999999999999998875556778899999999 89999999999999999963

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.96  E-value=9.7e-27  Score=144.86  Aligned_cols=129  Identities=17%  Similarity=0.265  Sum_probs=112.0

Q ss_pred             CEEEeCCCCceeeee------cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCC-C-eEEeeccccceEEEEEccCC
Q psy15612          1 MYLQSVSPGRQLQQH------DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKP-D-KYQLHLHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~------~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~-~-~~~~~~~~~~v~~~~~~~~~   71 (131)
                      |++||+++++.+..+      +|...|.++.|+| ++.++++++.|+.|++||++.. . ...+.+|...|.+++|+|++
T Consensus       182 i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~  261 (380)
T 3iz6_a          182 CVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDG  261 (380)
T ss_dssp             EEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTS
T ss_pred             EEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCC
Confidence            589999999888654      4778899999987 7899999999999999999743 3 46678899999999999999


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceE-EecCC-------CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASI-FQSKE-------SSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~~-------~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +++++++.|+.+++||+++++.+ ....+       ...+.+++|+|+|+++++++.|+.|++||+
T Consensus       262 ~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~  327 (380)
T 3iz6_a          262 QRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT  327 (380)
T ss_dssp             SEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred             CeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence            99999999999999999998877 22221       234889999999999999999999999996

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.96  E-value=1.3e-26  Score=140.17  Aligned_cols=130  Identities=23%  Similarity=0.304  Sum_probs=111.3

Q ss_pred             CEEEeCCCCc--eeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccC--
Q psy15612          1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAAC--   70 (131)
Q Consensus         1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~--   70 (131)
                      |++||+++++  .+..+ .|...|.+++|+|+  +.+|++++.|+.+++||+....   ...+..|...+.+++|+|+  
T Consensus        79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  158 (297)
T 2pm7_B           79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI  158 (297)
T ss_dssp             EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred             EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence            6899998874  33444 68899999999997  8899999999999999998653   3456789999999999997  


Q ss_pred             -----------CCEEEEeCCCCeEEEeeCCCCc----eE-EecCCCCCeEEEEECCCC---CEEEEecCCCcEEEEEee
Q psy15612         71 -----------GKWFVSTGKDNLLNAWRTPYGA----SI-FQSKESSSVLSCDISADD---KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        71 -----------~~~~~~~~~~~~i~~w~~~~~~----~~-~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~vw~~~  130 (131)
                                 ++.+++++.|+.|++||+++++    .. .+.+|...|.+++|+|++   +++++++.|++|++||+.
T Consensus       159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~  237 (297)
T 2pm7_B          159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD  237 (297)
T ss_dssp             -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred             cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence                       5789999999999999998765    23 456799999999999985   789999999999999974

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.96  E-value=1.1e-27  Score=148.46  Aligned_cols=129  Identities=13%  Similarity=0.174  Sum_probs=107.4

Q ss_pred             CEEEeCCCC--ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPG--RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      |++||+.++  +.+..+ +|...|.+++|+|++++|++++.|+.+++||+.++.    ...+..|...+.+++|+|+++.
T Consensus        35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  114 (377)
T 3dwl_C           35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDK  114 (377)
T ss_dssp             BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSC
T ss_pred             EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCE
Confidence            579999988  666666 799999999999999999999999999999998766    4556789999999999999999


Q ss_pred             EEEeCCCCeEEEeeCCCCce---E-EecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         74 FVSTGKDNLLNAWRTPYGAS---I-FQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~---~-~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +++++.|+.+++||+.+++.   . .... |...+.+++|+|+++++++++.|+.+++||+
T Consensus       115 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  175 (377)
T 3dwl_C          115 FAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA  175 (377)
T ss_dssp             CEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred             EEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence            99999999999999998763   2 4444 8999999999999999999999999999997

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.96  E-value=2e-26  Score=139.34  Aligned_cols=130  Identities=14%  Similarity=0.198  Sum_probs=111.4

Q ss_pred             CEEEeCCCC--ceeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccC--
Q psy15612          1 MYLQSVSPG--RQLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAAC--   70 (131)
Q Consensus         1 i~iwd~~~~--~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~--   70 (131)
                      |++||++++  +.+..+ +|.+.|.+++|+|+  ++.|++++.|++|++||+.+++   ...+..|...|.+++|+|+  
T Consensus        33 v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~  112 (297)
T 2pm7_B           33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY  112 (297)
T ss_dssp             EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGG
T ss_pred             EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCC
Confidence            689999743  556666 89999999999864  8999999999999999998764   3456678899999999997  


Q ss_pred             CCEEEEeCCCCeEEEeeCCCCce---EEecCCCCCeEEEEECCC-------------CCEEEEecCCCcEEEEEee
Q psy15612         71 GKWFVSTGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISAD-------------DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~~~~~---~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++++++++.|+.+++||++++..   .....|...+.+++|+|+             +++|++++.|++|++||++
T Consensus       113 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~  188 (297)
T 2pm7_B          113 GPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN  188 (297)
T ss_dssp             CSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEE
T ss_pred             CcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc
Confidence            88999999999999999987642   256678999999999997             5789999999999999975

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.96  E-value=6.9e-27  Score=144.47  Aligned_cols=130  Identities=10%  Similarity=0.123  Sum_probs=110.4

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCC-----------------------------------CEEEE--EeCCCcEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSG-----------------------------------EWLAV--GMENSNVE   43 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-----------------------------------~~l~~--~~~~~~v~   43 (131)
                      |++||.++++.+..+.+...|.+++++++.                                   ..++.  ++.++.|+
T Consensus        83 v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~  162 (355)
T 3vu4_A           83 VHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIH  162 (355)
T ss_dssp             EEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEE
T ss_pred             EEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEE
Confidence            589999999988888788889888888753                                   22333  46788899


Q ss_pred             EEeCCCCC-----------------eEEeeccccceEEEEEccCCCEEEEeCCCCe-EEEeeCCCCceE-Eec-C-CCCC
Q psy15612         44 VLHALKPD-----------------KYQLHLHESCVLSLRFAACGKWFVSTGKDNL-LNAWRTPYGASI-FQS-K-ESSS  102 (131)
Q Consensus        44 ~~~~~~~~-----------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-i~~w~~~~~~~~-~~~-~-~~~~  102 (131)
                      +||+.++.                 ...+.+|...|.+++|+|+|+++++++.|+. +++||+++++.+ ... + |...
T Consensus       163 iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~  242 (355)
T 3vu4_A          163 ITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD  242 (355)
T ss_dssp             EEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC
T ss_pred             EEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc
Confidence            99988754                 5667889999999999999999999999998 999999999988 333 4 8999


Q ss_pred             eEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612        103 VLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       103 v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |.+++|+|+++++++++.|++|++||+.
T Consensus       243 v~~~~~s~~~~~l~s~s~d~~v~iw~~~  270 (355)
T 3vu4_A          243 VVDMKWSTDGSKLAVVSDKWTLHVFEIF  270 (355)
T ss_dssp             EEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred             EEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence            9999999999999999999999999974

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.96  E-value=9.8e-27  Score=145.53  Aligned_cols=130  Identities=21%  Similarity=0.332  Sum_probs=113.8

Q ss_pred             CEEEeCCCCc----eeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCC-------C-eEEeeccccceEEEE
Q psy15612          1 MYLQSVSPGR----QLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKP-------D-KYQLHLHESCVLSLR   66 (131)
Q Consensus         1 i~iwd~~~~~----~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~-------~-~~~~~~~~~~v~~~~   66 (131)
                      |++||+.+..    ....+ +|.+.|.+++|+| ++..|++++.|+.|++|++.++       + ...+.+|...|.+++
T Consensus        59 i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~  138 (402)
T 2aq5_A           59 FLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVA  138 (402)
T ss_dssp             EEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEE
T ss_pred             EEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEE
Confidence            5799986542    22334 7999999999999 8999999999999999999876       2 356788999999999


Q ss_pred             EccCC-CEEEEeCCCCeEEEeeCCCCceE-Ee--cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         67 FAACG-KWFVSTGKDNLLNAWRTPYGASI-FQ--SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        67 ~~~~~-~~~~~~~~~~~i~~w~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+|++ +.+++++.|+.+++||+.+++.. ..  ..|...+.+++|+|+++++++++.|+.|++||++
T Consensus       139 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~  206 (402)
T 2aq5_A          139 WHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR  206 (402)
T ss_dssp             ECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred             ECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence            99998 69999999999999999999887 44  5789999999999999999999999999999974

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.96  E-value=8e-27  Score=154.36  Aligned_cols=130  Identities=15%  Similarity=0.268  Sum_probs=116.7

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe----eccccceEEEEEccCC--CE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL----HLHESCVLSLRFAACG--KW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~--~~   73 (131)
                      |++||+.+++....+ +|...|.+++|+|+++.|++++.|++|++||........+    ..|...|.+++|+|++  ..
T Consensus       454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~  533 (694)
T 3dm0_A          454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT  533 (694)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred             EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence            689999999988877 8999999999999999999999999999999876544333    3578889999999986  57


Q ss_pred             EEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.|++||+++++.. ...+|.+.|.+++|+|+++++++++.|+.|++||++
T Consensus       534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~  591 (694)
T 3dm0_A          534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA  591 (694)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred             EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence            999999999999999988877 677899999999999999999999999999999974

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.95  E-value=2.8e-26  Score=141.03  Aligned_cols=129  Identities=12%  Similarity=0.108  Sum_probs=111.5

Q ss_pred             CEEEeCCCC-------ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC
Q psy15612          1 MYLQSVSPG-------RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~   71 (131)
                      |++||+.++       +....+ +|...|.+++|+|++.++++++.|++|++||+.+++. ..+.+|...|.+++|+|++
T Consensus        51 v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~  130 (343)
T 2xzm_R           51 VMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN  130 (343)
T ss_dssp             EEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST
T ss_pred             EEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC
Confidence            689998753       334445 8999999999999999999999999999999998875 6678899999999999999


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceEEe---cCCCCCeEEEEECCCC----------CEEEEecCCCcEEEEEe
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASIFQ---SKESSSVLSCDISADD----------KYIVTGSGDKKATVYEV  129 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~~~---~~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~vw~~  129 (131)
                      +++++++.|+.+++||+........   ..|...+.+++|+|++          .++++++.|+.|++||.
T Consensus       131 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~  201 (343)
T 2xzm_R          131 RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT  201 (343)
T ss_dssp             TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET
T ss_pred             CEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC
Confidence            9999999999999999984433322   2688899999999987          78999999999999984

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.95  E-value=1.2e-26  Score=141.51  Aligned_cols=130  Identities=10%  Similarity=0.138  Sum_probs=113.4

Q ss_pred             CEEEeCCCC-----ceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPG-----RQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~-----~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      |++||+...     .++..+ +|...|.+++|+|+++++++++.|++|++||+.+++. ..+.+|...|.+++|+|+++.
T Consensus        42 v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~  121 (319)
T 3frx_A           42 LISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASM  121 (319)
T ss_dssp             EEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCE
T ss_pred             EEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCE
Confidence            578988642     334455 8999999999999999999999999999999998875 667889999999999999999


Q ss_pred             EEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCC------CCEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISAD------DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.+++||++........+|...+.+++++|.      +..+++++.|+.|++||++
T Consensus       122 l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~  184 (319)
T 3frx_A          122 IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLN  184 (319)
T ss_dssp             EEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETT
T ss_pred             EEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECC
Confidence            99999999999999975544477789999999999985      4489999999999999974

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.95  E-value=4.2e-27  Score=147.52  Aligned_cols=130  Identities=19%  Similarity=0.250  Sum_probs=113.7

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++....+ .|...|.+++|+|+++.|++++.|+.|++||+.+++. ..+..|...|.+++|+|+++.+++++
T Consensus       121 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~  200 (420)
T 3vl1_A          121 IKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS  200 (420)
T ss_dssp             EEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred             EEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc
Confidence            589999999888887 8999999999999999999999999999999987764 66788999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-Eec---CCC---------------------CCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQS---KES---------------------SSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~---~~~---------------------~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+++++.. ...   .+.                     ..+.+++|+|+++++++++.|+.|++||++
T Consensus       201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~  277 (420)
T 3vl1_A          201 LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF  277 (420)
T ss_dssp             TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT
T ss_pred             CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC
Confidence            9999999999988877 222   233                     444555668999999999999999999974

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.95  E-value=2.1e-26  Score=150.65  Aligned_cols=127  Identities=22%  Similarity=0.301  Sum_probs=111.3

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      ++||  +++....+ +|...|.+++|+|++. .|++++.|+++++||..+.+. ..+.+|...|.+++|+|+|+++++++
T Consensus       132 ~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s  209 (611)
T 1nr0_A          132 FLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG  209 (611)
T ss_dssp             EETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE
Confidence            3454  45555556 8999999999999987 599999999999999887664 56788999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-Ee-c------CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQ-S------KESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~-~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||..+++.. .. .      +|.+.|.+++|+|++++|++++.|++|++||++
T Consensus       210 ~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~  269 (611)
T 1nr0_A          210 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA  269 (611)
T ss_dssp             TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            9999999999988877 33 2      689999999999999999999999999999974

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.95  E-value=3.4e-26  Score=142.43  Aligned_cols=130  Identities=20%  Similarity=0.296  Sum_probs=116.7

Q ss_pred             CEEEeCCCCceeeee-c---C---CCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCe-EEeec------------
Q psy15612          1 MYLQSVSPGRQLQQH-D---F---SSQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDK-YQLHL------------   57 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~---~---~~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~-~~~~~------------   57 (131)
                      |++||+++++.+..+ .   |   ...+.+++|+|++++|++++.+   +.|++||+.+.+. ..+..            
T Consensus       209 i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  288 (397)
T 1sq9_A          209 VQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEF  288 (397)
T ss_dssp             EEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCB
T ss_pred             EEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccc
Confidence            589999999988877 5   6   8999999999999999999999   9999999988775 55666            


Q ss_pred             -cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-Eec------CC---------------CCCeEEEEECCCC--
Q psy15612         58 -HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQS------KE---------------SSSVLSCDISADD--  112 (131)
Q Consensus        58 -~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~------~~---------------~~~v~~~~~~~~~--  112 (131)
                       |...+.+++|+|+++++++++.|+.+++||+.+++.+ ...      .|               ...|.+++|+|++  
T Consensus       289 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~  368 (397)
T 1sq9_A          289 AHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR  368 (397)
T ss_dssp             SBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTS
T ss_pred             ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccc
Confidence             8899999999999999999999999999999999887 444      56               8999999999998  


Q ss_pred             --------CEEEEecCCCcEEEEEee
Q psy15612        113 --------KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       113 --------~~l~~~~~d~~i~vw~~~  130 (131)
                              +++++++.|+.|++||+.
T Consensus       369 ~~~~~~~~~~l~s~~~dg~i~iw~~~  394 (397)
T 1sq9_A          369 SGMGADLNESLCCVCLDRSIRWFREA  394 (397)
T ss_dssp             BSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred             ccccccccceEEEecCCCcEEEEEcC
Confidence                    799999999999999985

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.95  E-value=8.6e-27  Score=144.17  Aligned_cols=130  Identities=15%  Similarity=0.136  Sum_probs=106.2

Q ss_pred             CEEEeCCCCceeee-----ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC-E
Q psy15612          1 MYLQSVSPGRQLQQ-----HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK-W   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~   73 (131)
                      |++||+.+++....     .+|...|.+++|+|++++|++++.|+.|++||+.+++. ..+..|...|.+++|+|++. .
T Consensus       117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~  196 (357)
T 4g56_B          117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI  196 (357)
T ss_dssp             EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred             EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence            68999988765432     26889999999999999999999999999999998875 56788999999999999875 7


Q ss_pred             EEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.|++||+++++..   ....+...+.+++|+|+ +.++++++.|+.|++||++
T Consensus       197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~  257 (357)
T 4g56_B          197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK  257 (357)
T ss_dssp             EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred             eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence            889999999999999988876   23346778999999997 5678899999999999975

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.95  E-value=3.6e-26  Score=140.55  Aligned_cols=127  Identities=9%  Similarity=0.104  Sum_probs=107.4

Q ss_pred             EEeCCCCceeeee--cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccCCCEEEE
Q psy15612          3 LQSVSPGRQLQQH--DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         3 iwd~~~~~~~~~~--~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      +||..+++.+...  +|.+.|.+++|+|  +++++++++.|+.+++||+.+++....  ..+...+.+++|+|+++++++
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~las  187 (343)
T 3lrv_A          108 ILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLAL  187 (343)
T ss_dssp             EEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEE
T ss_pred             EeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEE
Confidence            3466677756554  6678899999999  999999999999999999998886433  345557999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE--EecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI--FQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.|+.|++||+++++..  .... |.+.|.+++|+|+++++++++ |+.|++||++
T Consensus       188 g~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~  243 (343)
T 3lrv_A          188 YSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLR  243 (343)
T ss_dssp             ECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETT
T ss_pred             EcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcC
Confidence            999999999999998876  4445 899999999999999999999 4599999985

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.95  E-value=7.2e-26  Score=138.01  Aligned_cols=130  Identities=15%  Similarity=0.161  Sum_probs=119.7

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++||+++++.+..+ .|...+.+++|+|+++.+++++.++.+++||+.+++......+...+.+++|+|+++.+++++.
T Consensus       165 v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  244 (337)
T 1gxr_A          165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME  244 (337)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred             EEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcC
Confidence            579999999988887 6889999999999999999999999999999998887555667888999999999999999999


Q ss_pred             CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.+++||+.+++......|...+.+++|+|+++++++++.|+.+++||+.
T Consensus       245 ~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~  295 (337)
T 1gxr_A          245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP  295 (337)
T ss_dssp             TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             CCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence            999999999988877777899999999999999999999999999999964

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.95  E-value=2.6e-26  Score=141.33  Aligned_cols=130  Identities=15%  Similarity=0.220  Sum_probs=115.7

Q ss_pred             CEEEeCCCCceeeee------cCCCCeEEEEECCC----CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc
Q psy15612          1 MYLQSVSPGRQLQQH------DFSSQIFSLGYCPS----GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~~~~~------~~~~~v~~~~~~~~----~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~   69 (131)
                      |++||+.+++.+..+      .+...|.+++|+|+    +.+|++++.|+.|++||+.+++. ..+..|...|.+++|+|
T Consensus        46 v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~  125 (366)
T 3k26_A           46 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP  125 (366)
T ss_dssp             EEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECS
T ss_pred             EEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECC
Confidence            589999988776555      25678999999998    67899999999999999998875 55677999999999999


Q ss_pred             -CCCEEEEeCCCCeEEEeeCCCCceE-Ee---cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         70 -CGKWFVSTGKDNLLNAWRTPYGASI-FQ---SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 -~~~~~~~~~~~~~i~~w~~~~~~~~-~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                       +++.+++++.|+.|++||+.+++.. ..   ..|...+.+++|+|+++++++++.|+.|++||++
T Consensus       126 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  191 (366)
T 3k26_A          126 RDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN  191 (366)
T ss_dssp             SCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred             CCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence             8999999999999999999998887 33   5799999999999999999999999999999975

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.95  E-value=3.5e-26  Score=148.18  Aligned_cols=127  Identities=23%  Similarity=0.326  Sum_probs=114.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++||. +++.+..+ .|...|.+++|+|+++.+++++.|+.+++|+........+..|...+.+++|+|+++++++++.
T Consensus       409 v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~  487 (577)
T 2ymu_A          409 VKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD  487 (577)
T ss_dssp             EEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred             EEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence            578995 46666666 8999999999999999999999999999999876666778899999999999999999999999


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |+.|++||. +++.+ ...+|...|.+++|+|++++|++++.|+.|++||.
T Consensus       488 d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~  537 (577)
T 2ymu_A          488 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR  537 (577)
T ss_dssp             TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred             CCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence            999999996 46655 67789999999999999999999999999999984

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.95  E-value=4.9e-26  Score=138.90  Aligned_cols=130  Identities=18%  Similarity=0.261  Sum_probs=109.9

Q ss_pred             CEEEeCCCC---------ceeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC-----------------
Q psy15612          1 MYLQSVSPG---------RQLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD-----------------   51 (131)
Q Consensus         1 i~iwd~~~~---------~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~-----------------   51 (131)
                      |++||++++         +.+..+ .|...|.+++|+|+  +..+++++.|+.|++||+.+.+                 
T Consensus        83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~  162 (351)
T 3f3f_A           83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP  162 (351)
T ss_dssp             EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred             EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence            589999876         345555 78899999999999  9999999999999999986543                 


Q ss_pred             --------------------------------------------eEEeeccccceEEEEEccCC----CEEEEeCCCCeE
Q psy15612         52 --------------------------------------------KYQLHLHESCVLSLRFAACG----KWFVSTGKDNLL   83 (131)
Q Consensus        52 --------------------------------------------~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~i   83 (131)
                                                                  ...+..|...|.+++|+|++    +++++++.|+.|
T Consensus       163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i  242 (351)
T 3f3f_A          163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI  242 (351)
T ss_dssp             CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred             cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence                                                        11234578889999999998    899999999999


Q ss_pred             EEeeCCCC----------------------------------------------ceE-EecCCCCCeEEEEECCCCCEEE
Q psy15612         84 NAWRTPYG----------------------------------------------ASI-FQSKESSSVLSCDISADDKYIV  116 (131)
Q Consensus        84 ~~w~~~~~----------------------------------------------~~~-~~~~~~~~v~~~~~~~~~~~l~  116 (131)
                      ++||+.++                                              +.+ ...+|...|.+++|+|++++|+
T Consensus       243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~  322 (351)
T 3f3f_A          243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS  322 (351)
T ss_dssp             EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred             EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence            99998764                                              222 4456889999999999999999


Q ss_pred             EecCCCcEEEEEee
Q psy15612        117 TGSGDKKATVYEVI  130 (131)
Q Consensus       117 ~~~~d~~i~vw~~~  130 (131)
                      +++.|+.|++||+.
T Consensus       323 s~~~dg~v~iw~~~  336 (351)
T 3f3f_A          323 SAGDDGKVRLWKAT  336 (351)
T ss_dssp             EEETTSCEEEEEEC
T ss_pred             EecCCCcEEEEecC
Confidence            99999999999985

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.95  E-value=5.6e-27  Score=145.26  Aligned_cols=130  Identities=14%  Similarity=0.101  Sum_probs=103.5

Q ss_pred             CEEEeCCCCc---eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeec-cccceEEEEEccCC
Q psy15612          1 MYLQSVSPGR---QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHL-HESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~-~~~~v~~~~~~~~~   71 (131)
                      |++||+++++   ....+ .|...|.+++|+|+++.|++++.|+.+++||+.+..    ...+.. |...+.+++|+|++
T Consensus        79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  158 (377)
T 3dwl_C           79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN  158 (377)
T ss_dssp             EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS
T ss_pred             EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC
Confidence            5899999877   34344 899999999999999999999999999999998775    355666 89999999999999


Q ss_pred             CEEEEeCCCCeEEEeeCCC------------------CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         72 KWFVSTGKDNLLNAWRTPY------------------GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++++.|+.+++||+..                  ++......|...|.+++|+|+++++++++.|+.|++||+.
T Consensus       159 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~  235 (377)
T 3dwl_C          159 VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS  235 (377)
T ss_dssp             SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred             CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence            9999999999999999852                  3333222788999999999999999999999999999985

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.95  E-value=7.4e-27  Score=147.53  Aligned_cols=130  Identities=16%  Similarity=0.209  Sum_probs=111.6

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC-EEEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK-WFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~   76 (131)
                      |++||++++......   .+...+.+++|+|++++|++|+.|+.|++||+.+.....+..|...|.+++|+|++. .+++
T Consensus       189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s  268 (435)
T 4e54_B          189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLAT  268 (435)
T ss_dssp             EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred             EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEE
Confidence            689999876544333   234467899999999999999999999999998777777888999999999999876 6788


Q ss_pred             eCCCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.|+.|++||+++++..    ...+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus       269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~  326 (435)
T 4e54_B          269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS  326 (435)
T ss_dssp             EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred             ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence            999999999999876644    345688999999999999999999999999999974

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.95  E-value=1.9e-26  Score=145.69  Aligned_cols=130  Identities=9%  Similarity=0.014  Sum_probs=109.1

Q ss_pred             CEEEeCCCCceeee--e-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQQ--H-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~--~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~   73 (131)
                      |+|||+.+++....  + +|.+.|.+++|+| ++.+|++++.|++|++||+++.....+..   +...+.+++|+|++++
T Consensus       144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (435)
T 4e54_B          144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM  223 (435)
T ss_dssp             EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE
T ss_pred             EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE
Confidence            68999987754433  2 7999999999998 68899999999999999998776544432   3445788999999999


Q ss_pred             EEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.|++||++.........|...|.+++|+|+++ ++++++.|+.|++||++
T Consensus       224 l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~  281 (435)
T 4e54_B          224 VVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR  281 (435)
T ss_dssp             EEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred             EEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecc
Confidence            9999999999999997554446678999999999999876 67889999999999975

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.95  E-value=3.6e-26  Score=139.31  Aligned_cols=128  Identities=12%  Similarity=0.108  Sum_probs=98.8

Q ss_pred             CEEEeCCCCceeeee-cCC---CCeEEEEECCCCCEE------------EEEeCCCcEEEEeCCCCCeEEe------ecc
Q psy15612          1 MYLQSVSPGRQLQQH-DFS---SQIFSLGYCPSGEWL------------AVGMENSNVEVLHALKPDKYQL------HLH   58 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~---~~v~~~~~~~~~~~l------------~~~~~~~~v~~~~~~~~~~~~~------~~~   58 (131)
                      |+|||+++++++..+ ++.   ..+.+++|+|+|..+            ++|+.|+++++||..+++....      .+|
T Consensus       205 IkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh  284 (356)
T 2w18_A          205 IVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQ  284 (356)
T ss_dssp             EEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTC
T ss_pred             EEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCC
Confidence            689999999999988 332   467788999999876            5577899999999998875322      245


Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeE-EEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVL-SCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ...+.+..+  ++..+++++.|++|++||+.+++.+ .+.+|...+. .++|+|+|++|++++.|++|++||+.
T Consensus       285 ~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~  356 (356)
T 2w18_A          285 AGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS  356 (356)
T ss_dssp             CCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred             cceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence            444444433  3788999999999999999999988 5556766554 68999999999999999999999973

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.95  E-value=9.8e-26  Score=140.08  Aligned_cols=130  Identities=15%  Similarity=0.156  Sum_probs=112.4

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC-EEEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK-WFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~   76 (131)
                      |++||+++.......   .+...|.+++|+|+++.+++++.|+.+++||+.......+..|...|.+++|+|+++ .+++
T Consensus       143 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s  222 (383)
T 3ei3_B          143 TTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMAT  222 (383)
T ss_dssp             EEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred             EEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence            589999964333332   344789999999999999999999999999996555677888999999999999999 8999


Q ss_pred             eCCCCeEEEeeCCC----CceEEecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPY----GASIFQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.|+.+++||+++    +.......|...+.+++|+| +++++++++.|+.|++||++
T Consensus       223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~  281 (383)
T 3ei3_B          223 SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSY  281 (383)
T ss_dssp             EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred             EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence            99999999999987    55555457999999999999 99999999999999999974

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.95  E-value=6.2e-25  Score=135.20  Aligned_cols=130  Identities=8%  Similarity=0.060  Sum_probs=117.4

Q ss_pred             CEEEeCCC-Cceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSP-GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++ ++.+..+ .|...|.+++|+|++..|++++.|+.+++||+.+.+......+...+..+.|+|+++.+++++
T Consensus       199 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  278 (369)
T 3zwl_B          199 ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGG  278 (369)
T ss_dssp             EEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred             EEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEee
Confidence            57999998 6777666 788999999999999999999999999999999888755555788899999999999999998


Q ss_pred             CCC--------------eEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDN--------------LLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~--------------~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .++              .+++||..+++.. ....|...|.+++|+|+++++++++.|+.|++|++.
T Consensus       279 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  345 (369)
T 3zwl_B          279 GQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE  345 (369)
T ss_dssp             CCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred             cCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence            887              8999999999888 667799999999999999999999999999999984

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.95  E-value=3.6e-26  Score=143.28  Aligned_cols=130  Identities=15%  Similarity=0.144  Sum_probs=114.1

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++||+.+++....+.....+....++|+++.|++++.++.+++||+.+++.... ..|...|.+++|+|+++++++++.
T Consensus        80 v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~  159 (420)
T 3vl1_A           80 DFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ  159 (420)
T ss_dssp             EEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET
T ss_pred             EEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC
Confidence            5789998877666554445556667899999999999999999999998876444 689999999999999999999999


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.+++||+.+++.. ....|...|.+++|+|+++++++++.|+.+++||++
T Consensus       160 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  211 (420)
T 3vl1_A          160 DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG  211 (420)
T ss_dssp             TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred             CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence            999999999988877 667799999999999999999999999999999974

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.95  E-value=6.9e-26  Score=141.72  Aligned_cols=130  Identities=10%  Similarity=0.213  Sum_probs=113.8

Q ss_pred             CEEEeCCCC-------ceeeee-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe-EEe--eccccceEEEEEc
Q psy15612          1 MYLQSVSPG-------RQLQQH-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK-YQL--HLHESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~v~~~~~~   68 (131)
                      |++||+.++       +.+..+ +|...|.+++|+|++ ..+++++.|+.|++||+.+++. ..+  ..|...+.+++|+
T Consensus       106 v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~  185 (402)
T 2aq5_A          106 VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS  185 (402)
T ss_dssp             EEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC
T ss_pred             EEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC
Confidence            589999987       455555 799999999999998 6999999999999999998875 455  6789999999999


Q ss_pred             cCCCEEEEeCCCCeEEEeeCCCCceE-Ee-cCCCCC-eEEEEECCCCCEEEEe---cCCCcEEEEEee
Q psy15612         69 ACGKWFVSTGKDNLLNAWRTPYGASI-FQ-SKESSS-VLSCDISADDKYIVTG---SGDKKATVYEVI  130 (131)
Q Consensus        69 ~~~~~~~~~~~~~~i~~w~~~~~~~~-~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~i~vw~~~  130 (131)
                      |+++.+++++.|+.+++||+++++.+ .. ..|.+. +.+++|+|++++++++   +.|+.|++||++
T Consensus       186 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~  253 (402)
T 2aq5_A          186 RDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK  253 (402)
T ss_dssp             TTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred             CCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence            99999999999999999999998887 33 456554 8999999999999998   789999999974

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.95  E-value=1.4e-25  Score=139.40  Aligned_cols=129  Identities=9%  Similarity=0.031  Sum_probs=112.9

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~   73 (131)
                      |++||+.+++....+   +|...|.+++|+| ++..+++++.|+.+++||+.+.....+..   +...+.+++|+|+++.
T Consensus        98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  177 (383)
T 3ei3_B           98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQM  177 (383)
T ss_dssp             EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTE
T ss_pred             EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCE
Confidence            589999988777665   5899999999999 78999999999999999999765555544   3478999999999999


Q ss_pred             EEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.+++||+. ++.. ....|...|.+++|+|+++ ++++++.|+.|++||++
T Consensus       178 l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~  235 (383)
T 3ei3_B          178 LATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR  235 (383)
T ss_dssp             EEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred             EEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence            9999999999999995 5554 6778999999999999999 89999999999999975

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.95  E-value=4.5e-25  Score=134.64  Aligned_cols=130  Identities=15%  Similarity=0.218  Sum_probs=110.2

Q ss_pred             CEEEeCCCCc----eeeee-cCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCC----------eEEeeccccceE
Q psy15612          1 MYLQSVSPGR----QLQQH-DFSSQIFSLGYCP--SGEWLAVGMENSNVEVLHALKPD----------KYQLHLHESCVL   63 (131)
Q Consensus         1 i~iwd~~~~~----~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~v~   63 (131)
                      |++||+.++.    ....+ +|...|.+++|+|  ++.+|++++.|+.|++||+.++.          ...+..|...+.
T Consensus        35 i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (351)
T 3f3f_A           35 IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY  114 (351)
T ss_dssp             EEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE
T ss_pred             EEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee
Confidence            5899998763    44444 7999999999999  69999999999999999998753          345677899999


Q ss_pred             EEEEccC--CCEEEEeCCCCeEEEeeCCCCce------------------------------------------------
Q psy15612         64 SLRFAAC--GKWFVSTGKDNLLNAWRTPYGAS------------------------------------------------   93 (131)
Q Consensus        64 ~~~~~~~--~~~~~~~~~~~~i~~w~~~~~~~------------------------------------------------   93 (131)
                      +++|+|+  ++++++++.|+.+++||+++++.                                                
T Consensus       115 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~  194 (351)
T 3f3f_A          115 SVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAI  194 (351)
T ss_dssp             EEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEE
T ss_pred             EEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcE
Confidence            9999999  99999999999999999875542                                                


Q ss_pred             ------------E-EecCCCCCeEEEEECCCC----CEEEEecCCCcEEEEEee
Q psy15612         94 ------------I-FQSKESSSVLSCDISADD----KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        94 ------------~-~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~vw~~~  130 (131)
                                  . ....|...|.+++|+|++    +++++++.|+.|++||++
T Consensus       195 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~  248 (351)
T 3f3f_A          195 IYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT  248 (351)
T ss_dssp             EEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred             EEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence                        1 223578889999999998    899999999999999985

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.95  E-value=5.1e-27  Score=151.24  Aligned_cols=129  Identities=8%  Similarity=0.023  Sum_probs=110.2

Q ss_pred             CEEEeCCCCce-eeee-cCCCCeEEE--EECCCC-CEEEEEeCCCcEEEEeCCCCCe-EEeecccc--ceEEEEEccCCC
Q psy15612          1 MYLQSVSPGRQ-LQQH-DFSSQIFSL--GYCPSG-EWLAVGMENSNVEVLHALKPDK-YQLHLHES--CVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~~-~~~~-~~~~~v~~~--~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~--~v~~~~~~~~~~   72 (131)
                      |++||+++++. ...+ .|...|.++  .|+|++ .+|++++.|+++++||+++.+. ..+.+|..  .+.+++|+|+++
T Consensus       289 V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~  368 (524)
T 2j04_B          289 VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY  368 (524)
T ss_dssp             EEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT
T ss_pred             EEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC
Confidence            68999997643 3334 799999999  578887 8999999999999999987664 34444442  478999999999


Q ss_pred             EEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         73 WFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+++++.|+.+++||++++..+ .+.+|.+.|.+++|+|+++++++++.|++|++||+
T Consensus       369 ~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~  426 (524)
T 2j04_B          369 SYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA  426 (524)
T ss_dssp             EEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred             eEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence            9999999999999999998875 56679999999999999999999999999999986

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.94  E-value=8.2e-26  Score=147.01  Aligned_cols=129  Identities=9%  Similarity=0.066  Sum_probs=114.8

Q ss_pred             CEEEeCCCCcee-eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec-cccceEEEEEcc-------
Q psy15612          1 MYLQSVSPGRQL-QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL-HESCVLSLRFAA-------   69 (131)
Q Consensus         1 i~iwd~~~~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~-~~~~v~~~~~~~-------   69 (131)
                      |++||+.+++.. ..+ .|...|.+++|+|++++|++++.|+.+++||+.+++. ..+.. |...|.+++|+|       
T Consensus       469 i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~  548 (615)
T 1pgu_A          469 IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANE  548 (615)
T ss_dssp             EEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-----
T ss_pred             EEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccc
Confidence            578999877664 334 7889999999999999999999999999999998876 44555 899999999999       


Q ss_pred             ---CCCEEEEeCCCCeEEEeeCCCC-ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         70 ---CGKWFVSTGKDNLLNAWRTPYG-ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 ---~~~~~~~~~~~~~i~~w~~~~~-~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                         +++++++++.|+.|++||+.++ +.+ ...+|...|.+++|+|+++ |++++.|+.|++||+.
T Consensus       549 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~  613 (615)
T 1pgu_A          549 EEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV  613 (615)
T ss_dssp             -CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred             cccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence               9999999999999999999987 455 6677999999999999999 9999999999999985

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.94  E-value=3.9e-25  Score=153.27  Aligned_cols=130  Identities=15%  Similarity=0.244  Sum_probs=120.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEcc--CCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAA--CGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~--~~~~~~~   76 (131)
                      |++||+.+++.+..+ +|...|.+++|+|+++++++++.|+.|++||+.+++. ..+..|...+.+++|+|  ++..+++
T Consensus       639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s  718 (1249)
T 3sfz_A          639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLAT  718 (1249)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred             EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEE
Confidence            589999999998888 7999999999999999999999999999999998875 66788999999999999  5568899


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.|+.+++||+.+++.. ...+|.+.|.+++|+|+++++++++.|+.|++||+.
T Consensus       719 g~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~  773 (1249)
T 3sfz_A          719 GSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR  773 (1249)
T ss_dssp             EETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGG
T ss_pred             EeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCC
Confidence            999999999999999887 667899999999999999999999999999999974

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.94  E-value=1.8e-25  Score=137.99  Aligned_cols=129  Identities=15%  Similarity=0.175  Sum_probs=114.3

Q ss_pred             CEEEeCCCCc--eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~   74 (131)
                      |++||+++++  .+..+ .|...|.+++|+|+++.+++++.|+.+++||+.+++.   ..+..|...+.+++|+|+++++
T Consensus        32 v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  111 (372)
T 1k8k_C           32 VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKF  111 (372)
T ss_dssp             EEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEE
T ss_pred             EEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEE
Confidence            5899999886  66666 7999999999999999999999999999999988763   3346688899999999999999


Q ss_pred             EEeCCCCeEEEeeCCCCce----E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         75 VSTGKDNLLNAWRTPYGAS----I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~----~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++++.++.+++||+..++.    . ....|...+.+++|+|+++++++++.|+.+++||+
T Consensus       112 ~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~  171 (372)
T 1k8k_C          112 AVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA  171 (372)
T ss_dssp             EEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred             EEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence            9999999999999988763    2 34567899999999999999999999999999995

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.94  E-value=6.4e-25  Score=135.70  Aligned_cols=130  Identities=6%  Similarity=0.058  Sum_probs=106.2

Q ss_pred             CEEEeCCCCc----------------eeeee-cCCCCeEEEEECCCCCEEEEEeCCCc-EEEEeCCCCCe-EEee-c-cc
Q psy15612          1 MYLQSVSPGR----------------QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSN-VEVLHALKPDK-YQLH-L-HE   59 (131)
Q Consensus         1 i~iwd~~~~~----------------~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~-v~~~~~~~~~~-~~~~-~-~~   59 (131)
                      |++||+++++                .+..+ +|.+.|.+++|+|++++|++++.|++ +++||+.+++. ..+. + |.
T Consensus       161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~  240 (355)
T 3vu4_A          161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR  240 (355)
T ss_dssp             EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred             EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence            5799998765                14444 89999999999999999999999998 99999998876 4555 4 89


Q ss_pred             cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE---Ee---------------------cCCCCCeEEEEECCCCCEE
Q psy15612         60 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI---FQ---------------------SKESSSVLSCDISADDKYI  115 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~---~~---------------------~~~~~~v~~~~~~~~~~~l  115 (131)
                      ..|.+++|+|+++++++++.|+.+++||+..+...   ..                     .........++|+++++.+
T Consensus       241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l  320 (355)
T 3vu4_A          241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV  320 (355)
T ss_dssp             SCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE
T ss_pred             CcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE
Confidence            99999999999999999999999999999765321   10                     0112223678999999999


Q ss_pred             EEecCCCcEEEEEee
Q psy15612        116 VTGSGDKKATVYEVI  130 (131)
Q Consensus       116 ~~~~~d~~i~vw~~~  130 (131)
                      ++++.||.+.+|++.
T Consensus       321 ~~~~~dg~~~~~~~~  335 (355)
T 3vu4_A          321 VVWPHTRMIETFKVV  335 (355)
T ss_dssp             EEETTTTEEEEEEEE
T ss_pred             EEEeCCCeEEEEEEE
Confidence            999999999999874

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.4e-25  Score=137.95  Aligned_cols=128  Identities=18%  Similarity=0.234  Sum_probs=106.1

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--EEeec-cccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--YQLHL-HESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~~~   75 (131)
                      |++||+++++.....  .+...+.+++|+|++.++++|+.|+.|++||+++++.  ..+.. |...|.+++|+|++.+++
T Consensus       151 i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~  230 (343)
T 3lrv_A          151 IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMV  230 (343)
T ss_dssp             EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEE
T ss_pred             EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEE
Confidence            589999999887665  4556799999999999999999999999999998874  46666 899999999999999999


Q ss_pred             EeCCCCeEEEeeCCCCceEE-ecC---CCCCe--EEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612         76 STGKDNLLNAWRTPYGASIF-QSK---ESSSV--LSCDISADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~~-~~~---~~~~v--~~~~~~~~~~~l~~~~~-d~~i~vw~~  129 (131)
                      +++ ++.+++||+++++... ...   +...+  .+++|+|+++++++++. |+.+++|++
T Consensus       231 s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~  290 (343)
T 3lrv_A          231 VEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKF  290 (343)
T ss_dssp             EEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             EEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence            999 5599999999877652 111   22233  46999999999999888 999999987

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.94  E-value=7.6e-25  Score=137.07  Aligned_cols=128  Identities=18%  Similarity=0.254  Sum_probs=114.3

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+.+++....+  .|...|.+++|+|+++.|++++.++.+.+||+.+++. ..+..|...+.++.|  +++.++++
T Consensus       115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~  192 (401)
T 4aez_A          115 VYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSG  192 (401)
T ss_dssp             EEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEE
T ss_pred             EEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEE
Confidence            589999999888776  4788999999999999999999999999999988775 667789999999999  46799999


Q ss_pred             CCCCeEEEeeCCCC-ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYG-ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~-~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|+.+++||++.. ... ....|.+.+.+++|+|+++++++++.|+.|++||++
T Consensus       193 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~  247 (401)
T 4aez_A          193 SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR  247 (401)
T ss_dssp             ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC
Confidence            99999999999854 334 667799999999999999999999999999999974

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.94  E-value=2.9e-25  Score=146.98  Aligned_cols=130  Identities=17%  Similarity=0.189  Sum_probs=112.0

Q ss_pred             CEEEeCCCCc-----eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGR-----QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~-----~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      |++||+.+..     ....+ +|...|.+++|+|++++|++++.|+.|++||+.++.. ..+.+|...|.+++|+|+++.
T Consensus       407 i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~  486 (694)
T 3dm0_A          407 IILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQ  486 (694)
T ss_dssp             EEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSC
T ss_pred             EEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCE
Confidence            6899987532     33344 8999999999999999999999999999999988875 667889999999999999999


Q ss_pred             EEEeCCCCeEEEeeCCCCceEEe----cCCCCCeEEEEECCCC--CEEEEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASIFQ----SKESSSVLSCDISADD--KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~~~----~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.|++||.........    .+|...|.+++|+|++  ..+++++.|+.|++||++
T Consensus       487 l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~  549 (694)
T 3dm0_A          487 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS  549 (694)
T ss_dssp             EEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT
T ss_pred             EEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECC
Confidence            99999999999999875544322    3578889999999986  579999999999999974

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.94  E-value=9.9e-26  Score=152.75  Aligned_cols=128  Identities=14%  Similarity=0.145  Sum_probs=108.7

Q ss_pred             CEEEeCCCCceee--ee----------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-----------------
Q psy15612          1 MYLQSVSPGRQLQ--QH----------DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-----------------   51 (131)
Q Consensus         1 i~iwd~~~~~~~~--~~----------~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-----------------   51 (131)
                      |++||+.+++...  .+          +|...|.+++|+|+++.|++|+.|++|++|++.+++                 
T Consensus       459 VrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~  538 (902)
T 2oaj_A          459 VRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNF  538 (902)
T ss_dssp             EEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------C
T ss_pred             EEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceee
Confidence            6899998874321  11          577899999999999999999999999999987552                 


Q ss_pred             -----------------------------eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEE------e
Q psy15612         52 -----------------------------KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIF------Q   96 (131)
Q Consensus        52 -----------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~------~   96 (131)
                                                   ...+..|...|.+++|+||| ++++++.|+.|++||++++..+.      .
T Consensus       539 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~  617 (902)
T 2oaj_A          539 RRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREI  617 (902)
T ss_dssp             CSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGT
T ss_pred             eeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHh
Confidence                                         23456799999999999999 99999999999999998776642      1


Q ss_pred             -cCCCCCeEEEEEC-----CCC---CEEEEecCCCcEEEEEe
Q psy15612         97 -SKESSSVLSCDIS-----ADD---KYIVTGSGDKKATVYEV  129 (131)
Q Consensus        97 -~~~~~~v~~~~~~-----~~~---~~l~~~~~d~~i~vw~~  129 (131)
                       .+|.+.|.+++|+     |||   ++|++++.|++|++||+
T Consensus       618 ~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~  659 (902)
T 2oaj_A          618 SGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI  659 (902)
T ss_dssp             CSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred             ccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence             2688899999999     885   89999999999999998

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.94  E-value=1.1e-25  Score=138.21  Aligned_cols=130  Identities=18%  Similarity=0.187  Sum_probs=113.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECC---CCCEEEEEeCCCcEEEEeCCCCCe-E-----EeeccccceEEEEEccCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCP---SGEWLAVGMENSNVEVLHALKPDK-Y-----QLHLHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~~-~-----~~~~~~~~v~~~~~~~~~   71 (131)
                      |++||+++++......+...+.+++|+|   ++..+++++.++.+++||+.+.+. .     ....|...+.+++|+|++
T Consensus       192 i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  271 (357)
T 3i2n_A          192 IKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQN  271 (357)
T ss_dssp             EEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTE
T ss_pred             EEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCC
Confidence            5899999998877778899999999999   999999999999999999976542 2     234789999999999999


Q ss_pred             C-EEEEeCCCCeEEEeeCCCCc-------------------eE-EecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         72 K-WFVSTGKDNLLNAWRTPYGA-------------------SI-FQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        72 ~-~~~~~~~~~~i~~w~~~~~~-------------------~~-~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      + ++++++.|+.+++||++++.                   .+ ....|...|.+++|+|++++++ +++.|+.|++||+
T Consensus       272 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~  351 (357)
T 3i2n_A          272 RELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV  351 (357)
T ss_dssp             EEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred             CcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence            8 79999999999999987542                   22 4567899999999999999998 7999999999998


Q ss_pred             e
Q psy15612        130 I  130 (131)
Q Consensus       130 ~  130 (131)
                      .
T Consensus       352 ~  352 (357)
T 3i2n_A          352 T  352 (357)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2.3e-25  Score=141.22  Aligned_cols=129  Identities=12%  Similarity=0.125  Sum_probs=115.5

Q ss_pred             CEEEeCC--CCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-----EeeccccceEEEEEccC
Q psy15612          1 MYLQSVS--PGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-----QLHLHESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~--~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~   70 (131)
                      |++||+.  +++.+..+   .+...|.+++|+|+++.|++++.++.+.+|++......     .+..|...|.+++|+|+
T Consensus       127 v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~  206 (450)
T 2vdu_B          127 LLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKD  206 (450)
T ss_dssp             EEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEEC
T ss_pred             EEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCC
Confidence            5899999  88887776   56788999999999999999999999999999776542     56778999999999999


Q ss_pred             ---CCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         71 ---GKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        71 ---~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                         ++++++++.|+.|++||+.+++.+  ...+|...|.+++|+ +++++++++.|+.|++||++
T Consensus       207 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~  270 (450)
T 2vdu_B          207 SDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK  270 (450)
T ss_dssp             TTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT
T ss_pred             CCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC
Confidence               999999999999999999988877  355799999999999 99999999999999999974

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.94  E-value=6.9e-25  Score=137.12  Aligned_cols=129  Identities=12%  Similarity=0.210  Sum_probs=117.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ .|...|.+++|+|+++.+++++.++.+++||+.+.+. ..+..|...+.++.|+|++ .+++++
T Consensus       229 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~  307 (425)
T 1r5m_A          229 IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCS  307 (425)
T ss_dssp             EEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEE
T ss_pred             EEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEe
Confidence            579999998888777 7889999999999999999999999999999988764 5667789999999999999 999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .++.+++||+.+++.+ ....+...+.+++|+|+++++++++.|+.|++||+.
T Consensus       308 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~  360 (425)
T 1r5m_A          308 MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK  360 (425)
T ss_dssp             TTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred             CCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence            9999999999998887 566788999999999999999999999999999974

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.94  E-value=1.7e-25  Score=149.57  Aligned_cols=130  Identities=12%  Similarity=0.193  Sum_probs=118.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ .|...|.+++|+|+++.|++++.++.+.+|++.+++. ..+..|...+.+++|+|+++++++++
T Consensus        37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  116 (814)
T 3mkq_A           37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS  116 (814)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred             EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc
Confidence            589999999988888 7999999999999999999999999999999998875 56778999999999999999999999


Q ss_pred             CCCeEEEeeCCCCce-E-EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGAS-I-FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~-~-~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+.++.. . ....|...+.+++|+| +++.+++++.|+.|++||+.
T Consensus       117 ~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~  171 (814)
T 3mkq_A          117 DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG  171 (814)
T ss_dssp             TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred             CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence            999999999988744 3 6667899999999999 88899999999999999963

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=4.7e-25  Score=136.25  Aligned_cols=130  Identities=13%  Similarity=0.195  Sum_probs=113.9

Q ss_pred             CEEEeCC--CCceeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccC--
Q psy15612          1 MYLQSVS--PGRQLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAAC--   70 (131)
Q Consensus         1 i~iwd~~--~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~--   70 (131)
                      |++||+.  +++.+..+ .|...|.+++|+|+  ++.|++++.|+.|++||+.+++   ...+..|...+.+++|+|+  
T Consensus        35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  114 (379)
T 3jrp_A           35 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY  114 (379)
T ss_dssp             EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred             EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCC
Confidence            5899997  45556566 79999999999987  9999999999999999999875   3456678899999999999  


Q ss_pred             CCEEEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECC-------------CCCEEEEecCCCcEEEEEee
Q psy15612         71 GKWFVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISA-------------DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.+++++.|+.+++||+.++...   ....|...+.+++|+|             +++++++++.|+.|++||++
T Consensus       115 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~  190 (379)
T 3jrp_A          115 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN  190 (379)
T ss_dssp             CSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred             CCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence            999999999999999999887433   5567899999999999             69999999999999999985

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2.7e-25  Score=143.27  Aligned_cols=129  Identities=12%  Similarity=0.133  Sum_probs=107.4

Q ss_pred             CEEEeCCCCcee----eee-cCCCCeEEEEECCC------CCEEEEEeCCCcEEEEeCCCCCe------------EEeec
Q psy15612          1 MYLQSVSPGRQL----QQH-DFSSQIFSLGYCPS------GEWLAVGMENSNVEVLHALKPDK------------YQLHL   57 (131)
Q Consensus         1 i~iwd~~~~~~~----~~~-~~~~~v~~~~~~~~------~~~l~~~~~~~~v~~~~~~~~~~------------~~~~~   57 (131)
                      |+|||+.+++..    ..+ .|.+.|..++|+|+      +.+|++++.|++|++||+.....            ..+..
T Consensus       185 I~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~  264 (524)
T 2j04_B          185 IQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL  264 (524)
T ss_dssp             EEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC
T ss_pred             EEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc
Confidence            579999877642    223 56788999999996      57999999999999999976531            24567


Q ss_pred             cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEE--EECCCC-CEEEEecCCCcEEEEEee
Q psy15612         58 HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSC--DISADD-KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        58 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~vw~~~  130 (131)
                      |...+.+++|+|+ ..|++++.|+.|++||+++++..  ....|...|.++  +|+|++ ++|++++.|++|++||++
T Consensus       265 h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~  341 (524)
T 2j04_B          265 ADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK  341 (524)
T ss_dssp             TTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred             CCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence            8899999999986 47999999999999999977543  467899999999  578887 899999999999999974

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2.1e-25  Score=151.18  Aligned_cols=129  Identities=14%  Similarity=0.109  Sum_probs=112.4

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE------------EeeccccceEEEEEc
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY------------QLHLHESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~------------~~~~~~~~v~~~~~~   68 (131)
                      |++||+++++.+..+.+.+.|.+++|+|+++++++|+.|+.|++||+.+....            ...+|...|.+++|+
T Consensus        81 v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s  160 (902)
T 2oaj_A           81 VYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN  160 (902)
T ss_dssp             EEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred             EEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence            68999999999888888889999999999999999999999999999887642            124578899999999


Q ss_pred             cC-CCEEEEeCCCCeEEEeeCCCCceE-EecCC------------------CCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         69 AC-GKWFVSTGKDNLLNAWRTPYGASI-FQSKE------------------SSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        69 ~~-~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~------------------~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      |+ +..+++++.|+.+ +||+++++.. ....+                  ...|.+++|+|+|++|++++.|+.|++||
T Consensus       161 p~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd  239 (902)
T 2oaj_A          161 PRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWD  239 (902)
T ss_dssp             TTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             cCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Confidence            96 5788999999999 9999988876 33222                  46799999999999999999999999999


Q ss_pred             ee
Q psy15612        129 VI  130 (131)
Q Consensus       129 ~~  130 (131)
                      ++
T Consensus       240 ~~  241 (902)
T 2oaj_A          240 AN  241 (902)
T ss_dssp             TT
T ss_pred             CC
Confidence            73

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.94  E-value=6.8e-25  Score=134.98  Aligned_cols=124  Identities=17%  Similarity=0.284  Sum_probs=110.6

Q ss_pred             CCCceeeee-cCCCCeEEEEECCC---CCEEEEEeCCCcEEEEeCCC-CCe--EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          7 SPGRQLQQH-DFSSQIFSLGYCPS---GEWLAVGMENSNVEVLHALK-PDK--YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         7 ~~~~~~~~~-~~~~~v~~~~~~~~---~~~l~~~~~~~~v~~~~~~~-~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      ...+.+..+ +|.+.|.+++|+|+   |++|++++.|+.|++|++.+ +..  ..+..|...|.+++|+|+++++++++.
T Consensus        27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~  106 (368)
T 3mmy_A           27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC  106 (368)
T ss_dssp             CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred             CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence            344555555 79999999999999   59999999999999999986 443  567789999999999999999999999


Q ss_pred             CCeEEEeeCCCCceEEecCCCCCeEEEEE--CCCCCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGASIFQSKESSSVLSCDI--SADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.+++||+.+++......|...+.+++|  +|+++++++++.|+.|++||++
T Consensus       107 dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~  159 (368)
T 3mmy_A          107 DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR  159 (368)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred             CCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence            99999999999988877789999999999  8999999999999999999974

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.94  E-value=2.5e-24  Score=134.13  Aligned_cols=130  Identities=18%  Similarity=0.299  Sum_probs=112.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCe--EEe---------------eccccc
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPDK--YQL---------------HLHESC   61 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~~--~~~---------------~~~~~~   61 (131)
                      |++||+++++.+..+ .|...|.+++|+|++. .+++++.|+.+++||++....  ..+               ..|...
T Consensus       168 v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (408)
T 4a11_B          168 VQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK  247 (408)
T ss_dssp             EEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred             EEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence            579999999888777 7899999999999998 588999999999999976541  222               467889


Q ss_pred             eEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-----------------------------------------------
Q psy15612         62 VLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-----------------------------------------------   94 (131)
Q Consensus        62 v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-----------------------------------------------   94 (131)
                      +.+++|+|+++++++++.|+.+++||+.+++..                                               
T Consensus       248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~  327 (408)
T 4a11_B          248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI  327 (408)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred             eeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence            999999999999999999999999998765422                                               


Q ss_pred             -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                       ...+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus       328 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~  364 (408)
T 4a11_B          328 TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPS  364 (408)
T ss_dssp             EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEEC
T ss_pred             eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCC
Confidence             224578899999999999999999999999999985

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.2e-24  Score=134.37  Aligned_cols=130  Identities=23%  Similarity=0.315  Sum_probs=113.7

Q ss_pred             CEEEeCCCCc--eeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEcc---
Q psy15612          1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAA---   69 (131)
Q Consensus         1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~---   69 (131)
                      |++||+++++  .+..+ .|...|.+++|+|+  +..+++++.|+.+++||+....   ...+..|...+.+++|+|   
T Consensus        81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  160 (379)
T 3jrp_A           81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI  160 (379)
T ss_dssp             EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred             EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence            5899999886  44455 68899999999999  9999999999999999998764   345678899999999999   


Q ss_pred             ----------CCCEEEEeCCCCeEEEeeCCCCceE-----EecCCCCCeEEEEECCC---CCEEEEecCCCcEEEEEee
Q psy15612         70 ----------CGKWFVSTGKDNLLNAWRTPYGASI-----FQSKESSSVLSCDISAD---DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 ----------~~~~~~~~~~~~~i~~w~~~~~~~~-----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vw~~~  130 (131)
                                ++..+++++.|+.|++||+++++..     ....|...|.+++|+|+   ++++++++.|+.|++||++
T Consensus       161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~  239 (379)
T 3jrp_A          161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD  239 (379)
T ss_dssp             ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred             cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence                      6999999999999999999876532     45568999999999999   8999999999999999975

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.94  E-value=6.3e-26  Score=138.24  Aligned_cols=130  Identities=19%  Similarity=0.236  Sum_probs=109.0

Q ss_pred             CEEEeCCCCc--eeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccC-
Q psy15612          1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAAC-   70 (131)
Q Consensus         1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~-   70 (131)
                      |++||+++++  ....+ +|...|.+++|+|+  +.+|++++.|+.+++|++.....    ..+..|...+.++.|+|+ 
T Consensus        83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  162 (316)
T 3bg1_A           83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV  162 (316)
T ss_dssp             EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred             EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence            5899999874  44445 78999999999998  78999999999999999986532    234568888999999997 


Q ss_pred             ----------------CCEEEEeCCCCeEEEeeCCCCc---eE-EecCCCCCeEEEEECCCC----CEEEEecCCCcEEE
Q psy15612         71 ----------------GKWFVSTGKDNLLNAWRTPYGA---SI-FQSKESSSVLSCDISADD----KYIVTGSGDKKATV  126 (131)
Q Consensus        71 ----------------~~~~~~~~~~~~i~~w~~~~~~---~~-~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~v  126 (131)
                                      ++++++++.|+.|++||+..+.   .. .+.+|...|.+++|+|++    ++|++++.|++|++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i  242 (316)
T 3bg1_A          163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI  242 (316)
T ss_dssp             CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred             CCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence                            4689999999999999997552   33 456799999999999986    78999999999999


Q ss_pred             EEee
Q psy15612        127 YEVI  130 (131)
Q Consensus       127 w~~~  130 (131)
                      ||+.
T Consensus       243 w~~~  246 (316)
T 3bg1_A          243 WTCD  246 (316)
T ss_dssp             EECS
T ss_pred             EEcc
Confidence            9863

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.94  E-value=4.7e-25  Score=137.94  Aligned_cols=130  Identities=13%  Similarity=0.212  Sum_probs=115.2

Q ss_pred             CEEEeCCCCceeeeec-C------CCCeEEEEECCCC-CEEEEEeCCC---cEEEEeCCCCC--eEEee-ccccceEEEE
Q psy15612          1 MYLQSVSPGRQLQQHD-F------SSQIFSLGYCPSG-EWLAVGMENS---NVEVLHALKPD--KYQLH-LHESCVLSLR   66 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~-~------~~~v~~~~~~~~~-~~l~~~~~~~---~v~~~~~~~~~--~~~~~-~~~~~v~~~~   66 (131)
                      |++||+++++.+..+. +      ...+.+++|+|++ ..+++++.++   .|++||+++..  ...+. .|...+.+++
T Consensus       190 v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~  269 (416)
T 2pm9_A          190 ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLD  269 (416)
T ss_dssp             EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEE
T ss_pred             EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEE
Confidence            5899999998887773 3      6789999999997 6889999998   99999998753  34556 7899999999


Q ss_pred             Ecc-CCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612         67 FAA-CGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        67 ~~~-~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~  130 (131)
                      |+| +++++++++.|+.+++||+.+++.+ ....|...+.+++|+|++ +++++++.|+.|++||+.
T Consensus       270 ~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~  336 (416)
T 2pm9_A          270 WCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ  336 (416)
T ss_dssp             ECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred             eCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence            999 8999999999999999999999887 666789999999999998 899999999999999974

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.94  E-value=3.4e-25  Score=134.98  Aligned_cols=115  Identities=20%  Similarity=0.207  Sum_probs=100.1

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEcc--CCCEEEEeCCCCeEEEeeCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAA--CGKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~i~~w~~~~   90 (131)
                      +|.+.|.+++|+|+|++|++++.|++|++||+.++.   ...+.+|...|.+++|+|  +++.+++++.|+.+++||+++
T Consensus        11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~   90 (316)
T 3bg1_A           11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN   90 (316)
T ss_dssp             ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred             cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence            799999999999999999999999999999998764   355788999999999986  489999999999999999988


Q ss_pred             Cc--eE-EecCCCCCeEEEEECCC--CCEEEEecCCCcEEEEEee
Q psy15612         91 GA--SI-FQSKESSSVLSCDISAD--DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        91 ~~--~~-~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++  .. ...+|...|.+++|+|+  +.++++++.|+.|++||++
T Consensus        91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~  135 (316)
T 3bg1_A           91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYT  135 (316)
T ss_dssp             SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEEC
T ss_pred             CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecC
Confidence            74  33 45678999999999998  7899999999999999974

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.94  E-value=4e-25  Score=138.22  Aligned_cols=129  Identities=9%  Similarity=0.024  Sum_probs=115.1

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ .|...+.+++|+|++ .+++++.++.+++||+.+++. ..+..|...+.+++|+|+++++++++
T Consensus       271 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  349 (425)
T 1r5m_A          271 LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF  349 (425)
T ss_dssp             EEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred             EEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence            589999998888777 688999999999999 999999999999999988775 55677888999999999999999999


Q ss_pred             CCCeEEEeeCCCCc--------------------eE-EecCCCC--CeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGA--------------------SI-FQSKESS--SVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~--------------------~~-~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+.+++                    .+ ....+..  .|.+++|+|++++|++++.|+.|++||+.
T Consensus       350 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          350 MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            99999999998777                    55 4555654  99999999999999999999999999974

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.94  E-value=1.4e-24  Score=133.62  Aligned_cols=92  Identities=12%  Similarity=0.202  Sum_probs=82.5

Q ss_pred             CEEEeCCC-Ccee-eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEE--ccCCCEEE
Q psy15612          1 MYLQSVSP-GRQL-QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRF--AACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~-~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~   75 (131)
                      |++||+++ ++.+ ..+ .|...|.+++|+|++++|++++.|+.|++||+.+.+......|...+.+++|  +|++++++
T Consensus        66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~  145 (368)
T 3mmy_A           66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVM  145 (368)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEE
T ss_pred             EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEE
Confidence            58999987 5555 444 7999999999999999999999999999999999888778889999999999  88999999


Q ss_pred             EeCCCCeEEEeeCCCCc
Q psy15612         76 STGKDNLLNAWRTPYGA   92 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~   92 (131)
                      +++.|+.+++||+++++
T Consensus       146 ~~~~dg~i~vwd~~~~~  162 (368)
T 3mmy_A          146 TGSWDKTLKFWDTRSSN  162 (368)
T ss_dssp             EEETTSEEEEECSSCSS
T ss_pred             EccCCCcEEEEECCCCc
Confidence            99999999999987664

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.94  E-value=4.3e-25  Score=135.88  Aligned_cols=128  Identities=14%  Similarity=0.145  Sum_probs=112.9

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeE-Ee---eccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKY-QL---HLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~-~~---~~~~~~v~~~~~~~~~~~~   74 (131)
                      |++||+++++.+..+ .|...|.+++|+| ++..+++++.|+.|++||+.+++.. .+   ..|...+.+++|+|+++.+
T Consensus        97 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  176 (366)
T 3k26_A           97 IRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKI  176 (366)
T ss_dssp             EEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEE
T ss_pred             EEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEE
Confidence            589999999998888 6999999999999 8999999999999999999988753 33   5789999999999999999


Q ss_pred             EEeCCCCeEEEeeCCCCceE-Eec----------------------------CCCCCeEEEEECCCCCEEEEecCCCcEE
Q psy15612         75 VSTGKDNLLNAWRTPYGASI-FQS----------------------------KESSSVLSCDISADDKYIVTGSGDKKAT  125 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~-~~~----------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~  125 (131)
                      ++++.|+.+++||+++++.. ...                            .|...|.+++|+  ++++++++.|+.|+
T Consensus       177 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~  254 (366)
T 3k26_A          177 MSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIV  254 (366)
T ss_dssp             EEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEE
T ss_pred             EEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEE
Confidence            99999999999999876544 111                            288999999998  77999999999999


Q ss_pred             EEEee
Q psy15612        126 VYEVI  130 (131)
Q Consensus       126 vw~~~  130 (131)
                      +||++
T Consensus       255 ~wd~~  259 (366)
T 3k26_A          255 CWKPG  259 (366)
T ss_dssp             EEEES
T ss_pred             EEeCC
Confidence            99974

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2.7e-25  Score=139.01  Aligned_cols=130  Identities=14%  Similarity=0.216  Sum_probs=113.3

Q ss_pred             CEEEeCCCCc---eeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC----C-CeEEeeccccceEEEEEccC-C
Q psy15612          1 MYLQSVSPGR---QLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK----P-DKYQLHLHESCVLSLRFAAC-G   71 (131)
Q Consensus         1 i~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~----~-~~~~~~~~~~~v~~~~~~~~-~   71 (131)
                      |++||+.+++   .+..+.|...|.+++|+|++++|++++.|+.+++|++..    . ....+..|...|.+++|+|+ +
T Consensus        47 v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  126 (416)
T 2pm9_A           47 LELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQD  126 (416)
T ss_dssp             CEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSST
T ss_pred             EEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCC
Confidence            6899999875   445557889999999999999999999999999999987    2 24567789999999999998 8


Q ss_pred             CEEEEeCCCCeEEEeeCCCCc------eE----EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEee
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGA------SI----FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~------~~----~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++++.|+.|++||+.+++      ..    ....|...+.+++|+|+ +.++++++.|+.|++||++
T Consensus       127 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~  196 (416)
T 2pm9_A          127 NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK  196 (416)
T ss_dssp             TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT
T ss_pred             CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC
Confidence            999999999999999999876      33    23468899999999999 7899999999999999974

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.94  E-value=1.5e-24  Score=135.70  Aligned_cols=130  Identities=18%  Similarity=0.219  Sum_probs=112.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCC-EEEEEe--CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGE-WLAVGM--ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++||+++++.+..+ .|...|.+++|+|++. .+++++  .|+.+++||+.+++......+...+.+++|+|+++.+++
T Consensus       241 v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  320 (401)
T 4aez_A          241 VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMS  320 (401)
T ss_dssp             EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred             EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEE
Confidence            589999999888777 7899999999999765 555554  699999999998887555567788999999999999998


Q ss_pred             --eCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 --TGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 --~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                        ++.++.+++|++.+++..   ....|...|.+++|+|+++++++++.|+.|++||+.
T Consensus       321 ~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~  379 (401)
T 4aez_A          321 THGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY  379 (401)
T ss_dssp             EECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred             EeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence              558999999999987655   356789999999999999999999999999999974

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.94  E-value=2.3e-24  Score=133.08  Aligned_cols=130  Identities=14%  Similarity=0.107  Sum_probs=112.0

Q ss_pred             CEEEeCCCCceeee---ecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEe-eccccceEEEEEccCCC
Q psy15612          1 MYLQSVSPGRQLQQ---HDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQL-HLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~-~~~~~~v~~~~~~~~~~   72 (131)
                      |++||+++++....   ..|...|.+++|+|+++.+++++.++.+++||+....    ...+ ..|...+.+++|+|+++
T Consensus        76 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  155 (372)
T 1k8k_C           76 AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV  155 (372)
T ss_dssp             EEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS
T ss_pred             EEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC
Confidence            58999988875443   3788999999999999999999999999999998766    2223 45788999999999999


Q ss_pred             EEEEeCCCCeEEEeeCC------------------CCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         73 WFVSTGKDNLLNAWRTP------------------YGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~------------------~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++++++.|+.+++||+.                  .++.. ....|...+.+++|+|+++++++++.|+.|++||++
T Consensus       156 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~  232 (372)
T 1k8k_C          156 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD  232 (372)
T ss_dssp             EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred             EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence            99999999999999954                  45555 455788999999999999999999999999999974

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.93  E-value=2.6e-25  Score=142.90  Aligned_cols=124  Identities=15%  Similarity=0.079  Sum_probs=100.2

Q ss_pred             EEeCCCCce--eeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecccc-----ceEEEEEccCCCEEE
Q psy15612          3 LQSVSPGRQ--LQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHES-----CVLSLRFAACGKWFV   75 (131)
Q Consensus         3 iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~   75 (131)
                      .|++.+++.  ...+.+...|.+++|+|+|+.|++++.++.+++|+..+ ....+. |..     .+.+++|||||++++
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LA  145 (588)
T 2j04_A           68 KLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIV  145 (588)
T ss_dssp             TTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEE
T ss_pred             eEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEE
Confidence            455555443  33336678899999999999999999999999999654 333344 554     599999999999999


Q ss_pred             EeCCCCeEEEeeCCCCce-------E-Ee----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDNLLNAWRTPYGAS-------I-FQ----SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~-------~-~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.|+.|++||+.++..       + ..    .+|...|.+++|+|+|  +++++.|+.+++||+.
T Consensus       146 sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~  210 (588)
T 2j04_A          146 VGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVS  210 (588)
T ss_dssp             EEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCC
T ss_pred             EEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECC
Confidence            999999999999998753       2 22    5577899999999999  7788889999999973

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.93  E-value=9.6e-24  Score=132.83  Aligned_cols=128  Identities=21%  Similarity=0.274  Sum_probs=113.9

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |+|||.++++....+   +|...|.+++|+|+|++|++|+.|+.|++||+.+++. ..+.+|...+.++.+  ++..+++
T Consensus       127 V~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~s  204 (420)
T 4gga_A          127 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSS  204 (420)
T ss_dssp             EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEE
T ss_pred             EEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEE
Confidence            689999999988765   5677899999999999999999999999999998875 667889998888876  4789999


Q ss_pred             eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.|+.+.+||.......  ....|...+..+.++|+++++++++.|+.+++|+..
T Consensus       205 gs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~  260 (420)
T 4gga_A          205 GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA  260 (420)
T ss_dssp             EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred             EeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence            999999999999875554  567899999999999999999999999999999964

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.93  E-value=2.6e-24  Score=135.37  Aligned_cols=130  Identities=19%  Similarity=0.279  Sum_probs=108.6

Q ss_pred             CEEEeCCCCcee----eee-cCCCCeEEEEECCCCC-EEEE--EeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC
Q psy15612          1 MYLQSVSPGRQL----QQH-DFSSQIFSLGYCPSGE-WLAV--GMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~----~~~-~~~~~v~~~~~~~~~~-~l~~--~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~   72 (131)
                      |++||..+++..    ... .|...|.+++|+|.+. .+++  |+.|+.|++||+.++.......+...+.++.|+|+++
T Consensus       254 v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~  333 (420)
T 4gga_A          254 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYK  333 (420)
T ss_dssp             EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTT
T ss_pred             ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCC
Confidence            478998876532    223 7888999999999755 4444  3578999999999988755555667889999999999


Q ss_pred             EEEEeC--CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         73 WFVSTG--KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~--~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .+++++  .|+.|++||+.+++.+ .+.+|.+.|.+++|+|+|++|++++.|++|++||+.
T Consensus       334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~  394 (420)
T 4gga_A          334 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF  394 (420)
T ss_dssp             EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred             eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence            887654  6899999999999988 677899999999999999999999999999999973

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.93  E-value=6.6e-25  Score=136.63  Aligned_cols=129  Identities=19%  Similarity=0.290  Sum_probs=112.1

Q ss_pred             CEEEeCCC------Cceee-----ee--------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec---
Q psy15612          1 MYLQSVSP------GRQLQ-----QH--------DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL---   57 (131)
Q Consensus         1 i~iwd~~~------~~~~~-----~~--------~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~---   57 (131)
                      |++||+++      ++.+.     .+        .|...+.+++|+|++ .+++++.++.+++||+.+.+. ..+..   
T Consensus       150 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  228 (397)
T 1sq9_A          150 TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHS  228 (397)
T ss_dssp             EEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-
T ss_pred             EEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecccc
Confidence            57899887      55554     43        267889999999999 999999999999999998775 55666   


Q ss_pred             c---ccceEEEEEccCCCEEEEeCCC---CeEEEeeCCCCceE-EecC-------------CCCCeEEEEECCCCCEEEE
Q psy15612         58 H---ESCVLSLRFAACGKWFVSTGKD---NLLNAWRTPYGASI-FQSK-------------ESSSVLSCDISADDKYIVT  117 (131)
Q Consensus        58 ~---~~~v~~~~~~~~~~~~~~~~~~---~~i~~w~~~~~~~~-~~~~-------------~~~~v~~~~~~~~~~~l~~  117 (131)
                      |   ...+.+++|+|+++++++++.|   +.|++||+.+++.+ ....             |...+.+++|+|+++++++
T Consensus       229 h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  308 (397)
T 1sq9_A          229 MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS  308 (397)
T ss_dssp             --CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE
T ss_pred             ccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEE
Confidence            7   8899999999999999999999   99999999998877 4555             8899999999999999999


Q ss_pred             ecCCCcEEEEEee
Q psy15612        118 GSGDKKATVYEVI  130 (131)
Q Consensus       118 ~~~d~~i~vw~~~  130 (131)
                      ++.|+.|++||++
T Consensus       309 ~~~dg~i~iwd~~  321 (397)
T 1sq9_A          309 AGWDGKLRFWDVK  321 (397)
T ss_dssp             EETTSEEEEEETT
T ss_pred             EeCCCeEEEEEcC
Confidence            9999999999974

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.93  E-value=7.4e-24  Score=133.75  Aligned_cols=130  Identities=13%  Similarity=0.272  Sum_probs=111.3

Q ss_pred             CEEEeCCCC---ceeeee-cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC--eEEeeccccceEEEEEccCCC-
Q psy15612          1 MYLQSVSPG---RQLQQH-DFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD--KYQLHLHESCVLSLRFAACGK-   72 (131)
Q Consensus         1 i~iwd~~~~---~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-   72 (131)
                      |++||++++   +.+..+ .|...|.+++|+|++. .+++++.++.|++||++...  ...+..|...+.+++|+|+++ 
T Consensus       256 i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~  335 (430)
T 2xyi_A          256 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNET  335 (430)
T ss_dssp             EEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTT
T ss_pred             EEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCC
Confidence            589999976   455555 7889999999999987 68899999999999998743  466778999999999999985 


Q ss_pred             EEEEeCCCCeEEEeeCCC--------------CceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         73 WFVSTGKDNLLNAWRTPY--------------GASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~--------------~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      .+++++.|+.|++||+..              .+.+ ...+|...|.+++|+|+++ ++++++.|+.|++|++.
T Consensus       336 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~  409 (430)
T 2xyi_A          336 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA  409 (430)
T ss_dssp             EEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred             EEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence            688999999999999986              2334 4556889999999999999 88999999999999974

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.93  E-value=3.5e-24  Score=129.86  Aligned_cols=130  Identities=17%  Similarity=0.229  Sum_probs=109.8

Q ss_pred             CEEEeCCCCceeee-----ecCCCCeEEEEECCCCCEE---EEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCC
Q psy15612          1 MYLQSVSPGRQLQQ-----HDFSSQIFSLGYCPSGEWL---AVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l---~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~   72 (131)
                      |++||+++++....     ..+.+.|..+.++|++..+   ++++.++.+++|+...........+...+..+.|+|+++
T Consensus       174 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~  253 (318)
T 4ggc_A          174 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYK  253 (318)
T ss_dssp             EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTT
T ss_pred             eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeeccccc
Confidence            58999987764322     2677889999999976643   355678899999999888777777888899999999998


Q ss_pred             EEEEe--CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         73 WFVST--GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~--~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .++++  +.|+.|++||+++++.+ .+.+|.+.|.+++|+|++++|++++.|++|++||+.
T Consensus       254 ~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~  314 (318)
T 4ggc_A          254 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF  314 (318)
T ss_dssp             EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred             ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence            87654  47899999999999988 677899999999999999999999999999999974

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.93  E-value=4.5e-25  Score=139.12  Aligned_cols=129  Identities=10%  Similarity=0.097  Sum_probs=109.8

Q ss_pred             CEEEeCCCCceeeee-c--CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee-ccccceEEEEEcc----CC
Q psy15612          1 MYLQSVSPGRQLQQH-D--FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH-LHESCVLSLRFAA----CG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~--~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~-~~~~~v~~~~~~~----~~   71 (131)
                      |++||+++++.+..+ .  |...|.+++|+|+++.+++++.|+.|++||+++++. ..+. .|...|.+++|+|    ++
T Consensus       194 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~  273 (437)
T 3gre_A          194 VIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNS  273 (437)
T ss_dssp             EEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTE
T ss_pred             EEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCc
Confidence            589999999998887 4  789999999999999999999999999999998775 3343 6778899996654    67


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceE-EecC--------------------------CCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASI-FQSK--------------------------ESSSVLSCDISADDKYIVTGSGDKKA  124 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~--------------------------~~~~v~~~~~~~~~~~l~~~~~d~~i  124 (131)
                      +++++++.|+.|++||+.+++.. ....                          |...|.+++|+ +++++++++.|+.|
T Consensus       274 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i  352 (437)
T 3gre_A          274 VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSI  352 (437)
T ss_dssp             EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEE
T ss_pred             cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeE
Confidence            89999999999999999988866 2221                          55668889999 77899999999999


Q ss_pred             EEEEee
Q psy15612        125 TVYEVI  130 (131)
Q Consensus       125 ~vw~~~  130 (131)
                      ++||+.
T Consensus       353 ~~wd~~  358 (437)
T 3gre_A          353 VMFSLN  358 (437)
T ss_dssp             EEEETT
T ss_pred             EEEECC
Confidence            999974

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.93  E-value=2e-23  Score=128.45  Aligned_cols=115  Identities=17%  Similarity=0.282  Sum_probs=106.8

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +|.+.|.+++|+|++++|++++.|+.|++||+.+++. ..+..|...|.+++|+|+++++++++.|+.+++||+.+++..
T Consensus        30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  109 (369)
T 3zwl_B           30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV  109 (369)
T ss_dssp             CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred             EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence            8999999999999999999999999999999988775 567789999999999999999999999999999999999988


Q ss_pred             EecCCCCCeEEEEECCCCCEEEEecCC-----CcEEEEEee
Q psy15612         95 FQSKESSSVLSCDISADDKYIVTGSGD-----KKATVYEVI  130 (131)
Q Consensus        95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~~  130 (131)
                      ....+...+.+++|+|+++++++++.+     +.+.+||+.
T Consensus       110 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~  150 (369)
T 3zwl_B          110 ATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE  150 (369)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred             EEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence            555588999999999999999999988     999999985

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.93  E-value=9.2e-25  Score=136.57  Aligned_cols=130  Identities=8%  Similarity=0.016  Sum_probs=107.6

Q ss_pred             CEEEeCCCCceee-----ee-cCCCCeEEEEECC--------CCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEE
Q psy15612          1 MYLQSVSPGRQLQ-----QH-DFSSQIFSLGYCP--------SGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSL   65 (131)
Q Consensus         1 i~iwd~~~~~~~~-----~~-~~~~~v~~~~~~~--------~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~   65 (131)
                      |++||+++++...     .+ +|.+.|.+++|+|        ++++|++++.|+++++||+.+.. ......|...+.++
T Consensus       113 v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v  192 (393)
T 4gq1_A          113 VRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISV  192 (393)
T ss_dssp             EEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEE
T ss_pred             EEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEE
Confidence            6899998876543     23 7999999999998        78999999999999999997665 46677888999999


Q ss_pred             EEccCCC-EEEEeCCCCeEEEeeCCCCceEE--------------------------ecCCCCCeEEEEEC-CCCCEEEE
Q psy15612         66 RFAACGK-WFVSTGKDNLLNAWRTPYGASIF--------------------------QSKESSSVLSCDIS-ADDKYIVT  117 (131)
Q Consensus        66 ~~~~~~~-~~~~~~~~~~i~~w~~~~~~~~~--------------------------~~~~~~~v~~~~~~-~~~~~l~~  117 (131)
                      +|+|++. .+++++.|+.+++||+++++...                          ...+...+.++.|+ |+++.+++
T Consensus       193 ~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s  272 (393)
T 4gq1_A          193 QFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILA  272 (393)
T ss_dssp             EEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEE
T ss_pred             EECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEE
Confidence            9999875 78999999999999998775431                          12456778888886 79999999


Q ss_pred             ecCCCcEEEEEee
Q psy15612        118 GSGDKKATVYEVI  130 (131)
Q Consensus       118 ~~~d~~i~vw~~~  130 (131)
                      ++.|+++++||++
T Consensus       273 ~s~d~~i~vwd~~  285 (393)
T 4gq1_A          273 MCKSGAWLRWNLF  285 (393)
T ss_dssp             ECTTSEEEEEEC-
T ss_pred             EeCCCCEEEEECc
Confidence            9999999999975

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.93  E-value=3.2e-23  Score=125.65  Aligned_cols=128  Identities=21%  Similarity=0.255  Sum_probs=112.6

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |+|||+++++++..+   +|...|.+++|+|+++++++|+.|+.|++|++.+++. ..+..|...+.++.  +++..+++
T Consensus        47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~--~~~~~l~s  124 (318)
T 4ggc_A           47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS--WNSYILSS  124 (318)
T ss_dssp             EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE--EETTEEEE
T ss_pred             EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee--cCCCEEEE
Confidence            689999999988766   5778899999999999999999999999999998885 56778887776654  46789999


Q ss_pred             eCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         77 TGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.++.+.+|+...+...  ....|...+..+.++++++++++++.|+.|++||++
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~  180 (318)
T 4ggc_A          125 GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA  180 (318)
T ss_dssp             EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred             EecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence            999999999998876554  667899999999999999999999999999999974

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.93  E-value=6.8e-24  Score=128.23  Aligned_cols=125  Identities=18%  Similarity=0.267  Sum_probs=107.9

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||  .++....+  .+...+.+++|+|++. +++++.++.+++||+.+++. ..+..|...+.+++|+|++ .++++
T Consensus       167 i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~  242 (313)
T 3odt_A          167 IKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSC  242 (313)
T ss_dssp             EEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEE
T ss_pred             EEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEE
Confidence            57898  34445455  3889999999999998 88999999999999998875 5677899999999999999 58899


Q ss_pred             CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|+.+++||+.+++.. ....+...+.+++|+|+++ +++++.|+.|++||+.
T Consensus       243 ~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~  295 (313)
T 3odt_A          243 GEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQE  295 (313)
T ss_dssp             ETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESC
T ss_pred             ecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCC
Confidence            99999999999999887 6667888999999999998 5568889999999974

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.93  E-value=1.8e-24  Score=136.40  Aligned_cols=129  Identities=10%  Similarity=0.162  Sum_probs=106.3

Q ss_pred             CEEEeCCCCc-----------eeeee-cCC------------CCeEEEEECCCC--CEEEEEeCCCcEEEEeCCCCCeE-
Q psy15612          1 MYLQSVSPGR-----------QLQQH-DFS------------SQIFSLGYCPSG--EWLAVGMENSNVEVLHALKPDKY-   53 (131)
Q Consensus         1 i~iwd~~~~~-----------~~~~~-~~~------------~~v~~~~~~~~~--~~l~~~~~~~~v~~~~~~~~~~~-   53 (131)
                      |++||+.+++           ....+ +|.            +.|.+++|+|++  ..+++++.|+.|++|++...... 
T Consensus        52 v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~  131 (447)
T 3dw8_B           52 VVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRP  131 (447)
T ss_dssp             EEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEE
T ss_pred             EEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCc
Confidence            5899998776           34455 777            889999999998  78999999999999998753321 


Q ss_pred             ---------------------------------------E-eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc-
Q psy15612         54 ---------------------------------------Q-LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA-   92 (131)
Q Consensus        54 ---------------------------------------~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~-   92 (131)
                                                             . ...|...|.+++|+|++++++++ .|+.+++||+.++. 
T Consensus       132 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~  210 (447)
T 3dw8_B          132 EGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDR  210 (447)
T ss_dssp             ECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEE
T ss_pred             ceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCc
Confidence                                                   1 25688999999999999999998 79999999998433 


Q ss_pred             eEE--------ecCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEee
Q psy15612         93 SIF--------QSKESSSVLSCDISADD-KYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        93 ~~~--------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~~  130 (131)
                      ...        ...|...|.+++|+|++ +++++++.|+.|++||++
T Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~  257 (447)
T 3dw8_B          211 SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR  257 (447)
T ss_dssp             EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred             eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence            332        34688999999999998 999999999999999974

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.93  E-value=7.7e-24  Score=130.00  Aligned_cols=130  Identities=9%  Similarity=0.089  Sum_probs=111.2

Q ss_pred             CEEEeCCCCc-eeeee-cCCCCeEEEE------ECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeecccc----ceEEEE
Q psy15612          1 MYLQSVSPGR-QLQQH-DFSSQIFSLG------YCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLHES----CVLSLR   66 (131)
Q Consensus         1 i~iwd~~~~~-~~~~~-~~~~~v~~~~------~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~----~v~~~~   66 (131)
                      |++||+++++ .+..+ .|...|.++.      |+|+++.+++++.|+.+++||+.+..  ...+..+..    .+.++.
T Consensus        92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~  171 (357)
T 3i2n_A           92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA  171 (357)
T ss_dssp             EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred             EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence            5899999887 66666 7999999995      57899999999999999999998775  344544433    788888


Q ss_pred             ----EccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECC---CCCEEEEecCCCcEEEEEee
Q psy15612         67 ----FAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISA---DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        67 ----~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~vw~~~  130 (131)
                          |+|+++++++++.++.+++||+++++......+...+.+++|+|   +++++++++.|+.|++||++
T Consensus       172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~  242 (357)
T 3i2n_A          172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR  242 (357)
T ss_dssp             EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred             EEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence                78899999999999999999999998887777899999999999   89999999999999999985

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.93  E-value=6.5e-24  Score=142.05  Aligned_cols=118  Identities=14%  Similarity=0.296  Sum_probs=108.7

Q ss_pred             eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCC
Q psy15612         13 QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPY   90 (131)
Q Consensus        13 ~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~   90 (131)
                      ..+ +|.+.|.+++|+|+++++++++.++.|.+||+.++.. ..+..|...|.+++|+|+++++++++.|+.+++||+.+
T Consensus         7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~   86 (814)
T 3mkq_A            7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT   86 (814)
T ss_dssp             EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred             eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence            344 7999999999999999999999999999999988775 66778999999999999999999999999999999999


Q ss_pred             CceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         91 GASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        91 ~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.. ....|...|.+++|+|+++++++++.|+.+++||+.
T Consensus        87 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~  127 (814)
T 3mkq_A           87 GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE  127 (814)
T ss_dssp             CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGG
T ss_pred             CcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECC
Confidence            9887 667799999999999999999999999999999963

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.93  E-value=3e-24  Score=135.41  Aligned_cols=129  Identities=10%  Similarity=0.211  Sum_probs=104.8

Q ss_pred             CEEEeCCC-Cceeee-------e-cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCe-----EEeecccc-----
Q psy15612          1 MYLQSVSP-GRQLQQ-------H-DFSSQIFSLGYCPSG-EWLAVGMENSNVEVLHALKPDK-----YQLHLHES-----   60 (131)
Q Consensus         1 i~iwd~~~-~~~~~~-------~-~~~~~v~~~~~~~~~-~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~-----   60 (131)
                      |++||+++ ++....       + .|...|.+++|+|++ ..+++++.|+.|++||++++..     ..+..|..     
T Consensus       200 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  279 (447)
T 3dw8_B          200 INLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRS  279 (447)
T ss_dssp             EEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CC
T ss_pred             EEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccc
Confidence            58999984 444442       3 788899999999998 9999999999999999987763     55566654     


Q ss_pred             -------ceEEEEEccCCCEEEEeCCCCeEEEeeCCC-CceE-EecCCCCC---------------eEEEEECCCCCEEE
Q psy15612         61 -------CVLSLRFAACGKWFVSTGKDNLLNAWRTPY-GASI-FQSKESSS---------------VLSCDISADDKYIV  116 (131)
Q Consensus        61 -------~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~-~~~~-~~~~~~~~---------------v~~~~~~~~~~~l~  116 (131)
                             .+.+++|+|+++++++++. +.+++||+++ ++.+ ....|...               +..++|+|++++++
T Consensus       280 ~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~  358 (447)
T 3dw8_B          280 FFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVM  358 (447)
T ss_dssp             HHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEE
T ss_pred             cccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEE
Confidence                   8999999999999999998 9999999987 6655 33344321               33499999999999


Q ss_pred             EecCCCcEEEEEee
Q psy15612        117 TGSGDKKATVYEVI  130 (131)
Q Consensus       117 ~~~~d~~i~vw~~~  130 (131)
                      +++.|+.|++||+.
T Consensus       359 s~s~dg~v~iwd~~  372 (447)
T 3dw8_B          359 TGSYNNFFRMFDRN  372 (447)
T ss_dssp             EECSTTEEEEEETT
T ss_pred             EeccCCEEEEEEcC
Confidence            99999999999974

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.92  E-value=1.1e-23  Score=133.59  Aligned_cols=127  Identities=17%  Similarity=0.265  Sum_probs=114.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ +|...|.+++|+|+++.+++++.|+.|++||+.+++. ..+..|...+.++.|+  ++++++++
T Consensus       292 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s  369 (464)
T 3v7d_B          292 LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAA  369 (464)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEE
T ss_pred             EEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEe
Confidence            589999999998888 7899999999999999999999999999999988875 6677899999999997  68999999


Q ss_pred             CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+.+++......+...+..++|+|+++++++++ |+.+++||+.
T Consensus       370 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~  420 (464)
T 3v7d_B          370 ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR  420 (464)
T ss_dssp             TTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred             CCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence            99999999999888776556777888899999999999988 8999999974

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.92  E-value=2e-23  Score=132.50  Aligned_cols=128  Identities=16%  Similarity=0.217  Sum_probs=112.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEEC--CCCCEEEEEeCCCcEEEEeCCCCCe------------------------E
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYC--PSGEWLAVGMENSNVEVLHALKPDK------------------------Y   53 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~~~~v~~~~~~~~~~------------------------~   53 (131)
                      |++||+++++.+..+ +|...|.+++|+  +++..+++++.|+.+++||+.+...                        .
T Consensus       185 i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (464)
T 3v7d_B          185 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG  264 (464)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred             EEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence            589999999998888 799999999998  5778999999999999999986642                        2


Q ss_pred             EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         54 QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        54 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ...+|...+.++  +++++.+++++.|+.+++||+.+++.+ ....|...+.+++|+|+++++++++.|+.|++||++
T Consensus       265 ~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~  340 (464)
T 3v7d_B          265 VLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE  340 (464)
T ss_dssp             EECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred             EccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence            345667777766  678999999999999999999999887 666799999999999999999999999999999974

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.92  E-value=4.5e-23  Score=128.44  Aligned_cols=130  Identities=12%  Similarity=0.185  Sum_probs=114.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCC---CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCC-EEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPS---GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGK-WFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~~~   75 (131)
                      |++||+++++....+.+...+.++.++|.   +..+++++.++.+.+||+.+++. ..+..|...+.+++|+|+++ .++
T Consensus       124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~  203 (408)
T 4a11_B          124 LKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILA  203 (408)
T ss_dssp             EEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEE
T ss_pred             EEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEE
Confidence            58999999999988888899999999985   44899999999999999987774 66778999999999999998 588


Q ss_pred             EeCCCCeEEEeeCCCCceE--Ee---------------cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDNLLNAWRTPYGASI--FQ---------------SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~--~~---------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.|+.+++||++++...  ..               ..|...+.+++|+|+++++++++.|+.+++||+.
T Consensus       204 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~  275 (408)
T 4a11_B          204 TASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS  275 (408)
T ss_dssp             EEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             EEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence            9999999999999876532  11               4578899999999999999999999999999974

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.92  E-value=7e-24  Score=133.70  Aligned_cols=130  Identities=12%  Similarity=0.153  Sum_probs=105.9

Q ss_pred             CEEEeCCC---Cc---eeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC---CCCeEE-ee----------c--c
Q psy15612          1 MYLQSVSP---GR---QLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL---KPDKYQ-LH----------L--H   58 (131)
Q Consensus         1 i~iwd~~~---~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~---~~~~~~-~~----------~--~   58 (131)
                      |++||+.+   ++   ....++|...|.+++|+|++..|++++.|+.|++||+.   .++... ..          .  +
T Consensus        88 v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~  167 (437)
T 3gre_A           88 IKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGK  167 (437)
T ss_dssp             EEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSS
T ss_pred             EEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCccc
Confidence            58999876   43   23344789999999999999999999999999999994   443211 11          1  3


Q ss_pred             ccceEEEE--EccCCCEEEEeCCCCeEEEeeCCCCceE-EecC--CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         59 ESCVLSLR--FAACGKWFVSTGKDNLLNAWRTPYGASI-FQSK--ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        59 ~~~v~~~~--~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ...+.++.  ++++++.+++++.|+.|++||+++++.+ ....  |...|.+++|+|+++++++++.|+.|++||++
T Consensus       168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  244 (437)
T 3gre_A          168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR  244 (437)
T ss_dssp             CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred             ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence            44566666  5678999999999999999999999887 4444  78999999999999999999999999999975

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.92  E-value=7.4e-24  Score=141.50  Aligned_cols=130  Identities=13%  Similarity=0.195  Sum_probs=114.0

Q ss_pred             CEEEeCC--CCceeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEccC--
Q psy15612          1 MYLQSVS--PGRQLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAAC--   70 (131)
Q Consensus         1 i~iwd~~--~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~--   70 (131)
                      |++||+.  +++.+..+ +|.+.|.+++|+|+  ++.+++++.|+.|++||+.++.   ......|...|.+++|+|+  
T Consensus        33 I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~  112 (753)
T 3jro_A           33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY  112 (753)
T ss_dssp             EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG
T ss_pred             EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCC
Confidence            5899987  44556566 79999999999988  9999999999999999998875   3556779999999999999  


Q ss_pred             CCEEEEeCCCCeEEEeeCCCCceE---EecCCCCCeEEEEECC-------------CCCEEEEecCCCcEEEEEee
Q psy15612         71 GKWFVSTGKDNLLNAWRTPYGASI---FQSKESSSVLSCDISA-------------DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        71 ~~~~~~~~~~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.+++++.|+.+++||+.++...   ....|...+.+++|+|             +++++++++.|+.|++||++
T Consensus       113 ~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~  188 (753)
T 3jro_A          113 GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN  188 (753)
T ss_dssp             CSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE
T ss_pred             CCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc
Confidence            999999999999999999877433   5667899999999999             58999999999999999985

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.92  E-value=2.3e-23  Score=127.29  Aligned_cols=120  Identities=18%  Similarity=0.271  Sum_probs=105.7

Q ss_pred             ceeeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC------eEEeeccccceEEEEEccCCCEEEEeCCCC
Q psy15612         10 RQLQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPD------KYQLHLHESCVLSLRFAACGKWFVSTGKDN   81 (131)
Q Consensus        10 ~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~   81 (131)
                      +...++ +|.+.|.+++|+|+ +++|++|+.|++|++||+...+      ...+.+|...|.+++|+|+++++++++.|+
T Consensus        29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~  108 (340)
T 4aow_A           29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG  108 (340)
T ss_dssp             EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence            344456 89999999999997 6899999999999999997654      244678999999999999999999999999


Q ss_pred             eEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         82 LLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        82 ~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+++|+....... ....+...+....++++++++++++.|+.+++||+
T Consensus       109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~  157 (340)
T 4aow_A          109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT  157 (340)
T ss_dssp             EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence            9999999988777 66667888899999999999999999999999986

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.92  E-value=3.4e-23  Score=130.74  Aligned_cols=130  Identities=8%  Similarity=0.183  Sum_probs=109.3

Q ss_pred             CEEEeCCCCce-------eeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEE
Q psy15612          1 MYLQSVSPGRQ-------LQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~~~-------~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~   67 (131)
                      |++||+.++..       ...+ .|...|.+++|+| ++..+++++.++.|++||+++..    ...+..|...+.+++|
T Consensus       206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~  285 (430)
T 2xyi_A          206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF  285 (430)
T ss_dssp             EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred             EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence            57999987322       2233 7889999999999 67889999999999999998762    3556789999999999


Q ss_pred             ccCCC-EEEEeCCCCeEEEeeCCCCc-eE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         68 AACGK-WFVSTGKDNLLNAWRTPYGA-SI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        68 ~~~~~-~~~~~~~~~~i~~w~~~~~~-~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      +|+++ .+++++.|+.|++||+++.. .+ ....|...|.+++|+|+++ ++++++.|+.|++||+.
T Consensus       286 ~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~  352 (430)
T 2xyi_A          286 NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS  352 (430)
T ss_dssp             CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred             CCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence            99987 68899999999999999744 33 5667899999999999985 68899999999999974

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.92  E-value=1.1e-23  Score=133.55  Aligned_cols=111  Identities=11%  Similarity=0.006  Sum_probs=97.2

Q ss_pred             CeEEEEECCCCCEE-EEEeCCCcEEEEeCC--CCCe-EEee--ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612         20 QIFSLGYCPSGEWL-AVGMENSNVEVLHAL--KPDK-YQLH--LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        20 ~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~--~~~~-~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~   93 (131)
                      .|.+++|+|+++.| ++++.|+.|++|++.  ++.. ..+.  .+...+.+++|+|+++++++++.++.+++|++.+++.
T Consensus       104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~  183 (450)
T 2vdu_B          104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPE  183 (450)
T ss_dssp             CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred             ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccc
Confidence            69999999999996 888899999999998  6654 3343  5678899999999999999999999999999987664


Q ss_pred             E-----EecCCCCCeEEEEECCC---CCEEEEecCCCcEEEEEee
Q psy15612         94 I-----FQSKESSSVLSCDISAD---DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        94 ~-----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vw~~~  130 (131)
                      .     ...+|...|.+++|+|+   ++++++++.|+.|++||++
T Consensus       184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~  228 (450)
T 2vdu_B          184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP  228 (450)
T ss_dssp             SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred             ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence            3     44568899999999999   9999999999999999985

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.92  E-value=4.3e-24  Score=130.65  Aligned_cols=127  Identities=9%  Similarity=0.141  Sum_probs=112.8

Q ss_pred             CEEEeCCCCc----eeeeecCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeC-CCCCeEEeec--cccceEEEEEccCCC
Q psy15612          1 MYLQSVSPGR----QLQQHDFSSQIFSLGYCPSGE-WLAVGMENSNVEVLHA-LKPDKYQLHL--HESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~-~~~~~~~~~~--~~~~v~~~~~~~~~~   72 (131)
                      |++||+.+++    ......|...|.+++|+|+++ .+++++.++.|++|++ .+.+...+..  |...|.+++|+| ++
T Consensus        35 v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~  113 (342)
T 1yfq_A           35 LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DD  113 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TT
T ss_pred             EEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CC
Confidence            5899998877    444458999999999999999 9999999999999999 8888877888  999999999999 99


Q ss_pred             EEEEeCCCCeEEEeeCCC---------CceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         73 WFVSTGKDNLLNAWRTPY---------GASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .+++++.|+.+++||+++         ++......+...+.+++|+|++  +++++.|+.|++||++
T Consensus       114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~  178 (342)
T 1yfq_A          114 KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLP  178 (342)
T ss_dssp             EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESS
T ss_pred             EEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECC
Confidence            999999999999999987         6655444588999999999887  8888999999999975

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.92  E-value=1.9e-23  Score=139.54  Aligned_cols=130  Identities=23%  Similarity=0.310  Sum_probs=113.7

Q ss_pred             CEEEeCCCCc--eeeee-cCCCCeEEEEECCC--CCEEEEEeCCCcEEEEeCCCCC---eEEeeccccceEEEEEcc---
Q psy15612          1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPS--GEWLAVGMENSNVEVLHALKPD---KYQLHLHESCVLSLRFAA---   69 (131)
Q Consensus         1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~---   69 (131)
                      |++||+.+++  .+..+ .|...|.+++|+|+  +..+++++.|+.|++||+.+..   ...+..|...+.++.|+|   
T Consensus        79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~  158 (753)
T 3jro_A           79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI  158 (753)
T ss_dssp             EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred             EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence            5899999886  44444 78999999999999  9999999999999999998763   355678899999999999   


Q ss_pred             ----------CCCEEEEeCCCCeEEEeeCCCCce----E-EecCCCCCeEEEEECCC---CCEEEEecCCCcEEEEEee
Q psy15612         70 ----------CGKWFVSTGKDNLLNAWRTPYGAS----I-FQSKESSSVLSCDISAD---DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 ----------~~~~~~~~~~~~~i~~w~~~~~~~----~-~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~vw~~~  130 (131)
                                ++..+++++.|+.|++||++++..    . ....|...|.+++|+|+   ++++++++.|+.|++||++
T Consensus       159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~  237 (753)
T 3jro_A          159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD  237 (753)
T ss_dssp             --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred             ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence                      589999999999999999987642    2 45678999999999999   8999999999999999985

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.92  E-value=5.3e-23  Score=133.88  Aligned_cols=128  Identities=11%  Similarity=0.134  Sum_probs=115.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCe--EEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDK--YQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      +++|+..+++.+..+.+...+.+++|+  ++.+++++. ++.+++||+.+...  ..+..|...+.+++|+|++++++++
T Consensus       429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~  506 (615)
T 1pgu_A          429 LLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG  506 (615)
T ss_dssp             EEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEE
T ss_pred             eEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEc
Confidence            357888788888888889999999999  889999999 99999999988765  4567788999999999999999999


Q ss_pred             CCCCeEEEeeCCCCceE-EecC-CCCCeEEEEECC----------CCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGASI-FQSK-ESSSVLSCDISA----------DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~~~~-~~~~v~~~~~~~----------~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|+.+++||+.+++.+ .... |...|.+++|+|          +++++++++.|+.|++||+.
T Consensus       507 ~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~  571 (615)
T 1pgu_A          507 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK  571 (615)
T ss_dssp             ETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred             CCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC
Confidence            99999999999999888 4444 899999999999          99999999999999999974

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.91  E-value=9.5e-23  Score=126.47  Aligned_cols=113  Identities=14%  Similarity=0.094  Sum_probs=87.1

Q ss_pred             CCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +...+..++|+|||+++++++  .|+.|++||+.+.+......|...|.+++|+|||+++++++.++ +.+|+..+++..
T Consensus       132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~  210 (365)
T 4h5i_A          132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCI  210 (365)
T ss_dssp             TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEE
T ss_pred             cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcce
Confidence            344588999999999987554  68999999999888655556778899999999999999888554 455544333221


Q ss_pred             -----------------------------------------------------EecCCCCCeEEEEECCCCCEEEEecCC
Q psy15612         95 -----------------------------------------------------FQSKESSSVLSCDISADDKYIVTGSGD  121 (131)
Q Consensus        95 -----------------------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d  121 (131)
                                                                           ....|...|.+++|+|+|++|++++.|
T Consensus       211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D  290 (365)
T 4h5i_A          211 ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND  290 (365)
T ss_dssp             EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT
T ss_pred             eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC
Confidence                                                                 011345668899999999999999999


Q ss_pred             CcEEEEEee
Q psy15612        122 KKATVYEVI  130 (131)
Q Consensus       122 ~~i~vw~~~  130 (131)
                      ++|++||++
T Consensus       291 ~~V~iwd~~  299 (365)
T 4h5i_A          291 NSIALVKLK  299 (365)
T ss_dssp             SCEEEEETT
T ss_pred             CEEEEEECC
Confidence            999999974

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.91  E-value=3.5e-23  Score=126.59  Aligned_cols=114  Identities=11%  Similarity=-0.053  Sum_probs=105.3

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC----eEEeeccccceEEEEEccCCC-EEEEeCCCCeEEEeeC-C
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD----KYQLHLHESCVLSLRFAACGK-WFVSTGKDNLLNAWRT-P   89 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~i~~w~~-~   89 (131)
                      .|.+.|.+++|+|++++|++++.|+.|++|++.+..    ......|...+.+++|+|+++ ++++++.|+.|++||+ .
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~   88 (342)
T 1yfq_A            9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG   88 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence            688999999999999999999999999999998777    566678999999999999999 9999999999999999 8


Q ss_pred             CCceEEecC--CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         90 YGASIFQSK--ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        90 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++......  |...|.+++|+| ++++++++.|+.|++||++
T Consensus        89 ~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~  130 (342)
T 1yfq_A           89 SPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPR  130 (342)
T ss_dssp             SSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHH
T ss_pred             CCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccc
Confidence            887777777  999999999999 9999999999999999863

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.91  E-value=1.5e-22  Score=140.43  Aligned_cols=129  Identities=15%  Similarity=0.151  Sum_probs=115.1

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-E------------------------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-Q------------------------   54 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~------------------------   54 (131)
                      |++||+++++.+..+ +|...|.+++|+|+++.+++++.|+.+++||+.++... .                        
T Consensus       725 v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  804 (1249)
T 3sfz_A          725 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC  804 (1249)
T ss_dssp             EEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred             EEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE
Confidence            589999999988877 89999999999999999999999999999998755321 0                        


Q ss_pred             -------------------------------eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCC
Q psy15612         55 -------------------------------LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSS  102 (131)
Q Consensus        55 -------------------------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~  102 (131)
                                                     ...|...+.+++|+|+++.+++++.++.+++||..++... ...+|...
T Consensus       805 ~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~  884 (1249)
T 3sfz_A          805 SWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSW  884 (1249)
T ss_dssp             CBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSC
T ss_pred             EECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccc
Confidence                                           1156678889999999999999999999999999998887 67789999


Q ss_pred             eEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612        103 VLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       103 v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |.+++|+|+++++++++.|+.+++||+
T Consensus       885 v~~v~~spdg~~l~s~s~dg~v~vw~~  911 (1249)
T 3sfz_A          885 VHGVMFSPDGSSFLTASDDQTIRVWET  911 (1249)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred             eEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence            999999999999999999999999995

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.91  E-value=3.9e-22  Score=124.10  Aligned_cols=130  Identities=17%  Similarity=0.181  Sum_probs=108.8

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE-EeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV-STG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~   78 (131)
                      |++||+++++.+..+.+...+.+++|+|+++.+ ++++.++.|++||+.+++......+...+.+++|+|+++.++ +++
T Consensus        14 v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~   93 (391)
T 1l0q_A           14 ISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM   93 (391)
T ss_dssp             EEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET
T ss_pred             EEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEEC
Confidence            589999999998888666679999999999977 566689999999999888644444445899999999999875 555


Q ss_pred             CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEE-EEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYI-VTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~  130 (131)
                      .++.|++||+.+++......+...+.+++|+|+++.+ ++++.++.|.+||+.
T Consensus        94 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~  146 (391)
T 1l0q_A           94 ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV  146 (391)
T ss_dssp             TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             CCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence            6799999999999887555566788999999999977 678889999999963

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.91  E-value=4.8e-23  Score=132.53  Aligned_cols=123  Identities=11%  Similarity=0.087  Sum_probs=99.8

Q ss_pred             CEEEeCCCCceeeeecCCC-----CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe--------EEe----eccccceE
Q psy15612          1 MYLQSVSPGRQLQQHDFSS-----QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK--------YQL----HLHESCVL   63 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~--------~~~----~~~~~~v~   63 (131)
                      |++||.++  ++..+.|..     .+.+++|||+|++|++|+.|++|++||+.++..        ..+    .+|...|.
T Consensus       109 V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~  186 (588)
T 2j04_A          109 VSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT  186 (588)
T ss_dssp             EEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE
T ss_pred             EEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE
Confidence            57899543  444445443     599999999999999999999999999988752        444    45678999


Q ss_pred             EEEEccCCCEEEEeCCCCeEEEeeCCCCceE----Ee-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         64 SLRFAACGKWFVSTGKDNLLNAWRTPYGASI----FQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~----~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++|+|+|  +++++.|+.+++||+.+++..    .+ ..|...|.+++|+  ++.+++++ +++|++||+.
T Consensus       187 sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~  253 (588)
T 2j04_A          187 HIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLK  253 (588)
T ss_dssp             EEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETT
T ss_pred             EEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECC
Confidence            99999999  778888999999999877642    23 3678899999999  68888887 6899999963

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.91  E-value=8.5e-22  Score=124.04  Aligned_cols=129  Identities=13%  Similarity=0.045  Sum_probs=106.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC---cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE-E
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS---NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV-S   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~   76 (131)
                      |++||+..++......|...+.+++|+|+|+.|++++.++   .|.+||+.+++...+..+...+.+++|+|||+.++ +
T Consensus       161 i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~  240 (415)
T 2hqs_A          161 LRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFA  240 (415)
T ss_dssp             EEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             EEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEE
Confidence            5799998555444447889999999999999999998775   89999999988877788888999999999999887 5


Q ss_pred             eCCCC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CC--cEEEEEe
Q psy15612         77 TGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DK--KATVYEV  129 (131)
Q Consensus        77 ~~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~vw~~  129 (131)
                      ++.++  .|++||+.+++...+..+...+.+++|+|+|+++++++. ++  .|.+||+
T Consensus       241 ~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~  298 (415)
T 2hqs_A          241 LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI  298 (415)
T ss_dssp             ECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred             EecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence            66554  499999998887777778889999999999999887775 45  4656664

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.91  E-value=7.5e-24  Score=134.02  Aligned_cols=115  Identities=11%  Similarity=0.051  Sum_probs=99.3

Q ss_pred             cCCCCeEEEEECCCCCEEE----EEeCCCcEEEEeCCCC--------C----eEEeeccccceEEEEEccC-CCEEEEeC
Q psy15612         16 DFSSQIFSLGYCPSGEWLA----VGMENSNVEVLHALKP--------D----KYQLHLHESCVLSLRFAAC-GKWFVSTG   78 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~----~~~~~~~v~~~~~~~~--------~----~~~~~~~~~~v~~~~~~~~-~~~~~~~~   78 (131)
                      .+...|.+++|+|++++|+    +++.|+.|++||+.+.        +    ...+.+|...|.+++|+|+ +..+++++
T Consensus        90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s  169 (434)
T 2oit_A           90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL  169 (434)
T ss_dssp             CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred             cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence            4567899999999999999    7788999999998643        1    1234568899999999997 88999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||++++... ....|...+.+++|+|+|++|++++.|+.|++||++
T Consensus       170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~  222 (434)
T 2oit_A          170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT  222 (434)
T ss_dssp             TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred             CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence            9999999999988665 455678899999999999999999999999999864

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.91  E-value=1.8e-22  Score=121.98  Aligned_cols=125  Identities=14%  Similarity=0.163  Sum_probs=106.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||  .++....+ .|...+.++.+.| ++..+++++.++.+++||... ....+.. +...+.+++|+|++. ++++
T Consensus       126 i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~i~~~~~~~~~~-~~~~  201 (313)
T 3odt_A          126 AKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-VIKTFSGIHNDVVRHLAVVDDGH-FISC  201 (313)
T ss_dssp             EEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-EEEEECSSCSSCEEEEEEEETTE-EEEE
T ss_pred             EEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-eEEEEeccCcccEEEEEEcCCCe-EEEc
Confidence            57899  55666555 7889999999988 899999999999999999332 2334444 888999999999998 8899


Q ss_pred             CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.++.+++||+++++.+ ....|...+.+++|+|++ .+++++.|+.|++||+.
T Consensus       202 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~  254 (313)
T 3odt_A          202 SNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKE  254 (313)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTT
T ss_pred             cCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECC
Confidence            99999999999999887 566799999999999999 58889999999999964

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.90  E-value=1.9e-21  Score=121.00  Aligned_cols=130  Identities=15%  Similarity=0.150  Sum_probs=108.8

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEE-EEeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWF-VSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~   78 (131)
                      |++||+++++.+..+.+...+.+++|+|+++.++.+ ..++.|.+||+.+++......+...+.+++|+|+++.+ ++++
T Consensus        56 i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~  135 (391)
T 1l0q_A           56 VSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNN  135 (391)
T ss_dssp             EEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET
T ss_pred             EEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeC
Confidence            589999999998888666699999999999988654 46699999999988865544455678999999999977 6788


Q ss_pred             CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEE-EEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYI-VTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~  130 (131)
                      .++.+++||+.+++..........+..++|+|+++++ ++++.++.|.+||++
T Consensus       136 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~  188 (391)
T 1l0q_A          136 GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTV  188 (391)
T ss_dssp             TTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             CCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence            8999999999998887544455678999999999987 567788999999974

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.90  E-value=9.3e-22  Score=124.24  Aligned_cols=124  Identities=24%  Similarity=0.352  Sum_probs=109.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+.+++....+ +|.+.|.+++|  +++.+++|+.|+.|++||+.+++. ..+..|...+.+++|+  +..+++++
T Consensus       155 i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s  230 (435)
T 1p22_A          155 IKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCS  230 (435)
T ss_dssp             EEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEE
T ss_pred             EEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEee
Confidence            589999999998888 79999999998  788999999999999999998875 5677899999999996  45899999


Q ss_pred             CCCeEEEeeCCCCceE----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+.+++..    ...+|...+.+++|  +++++++++.|+.|++||++
T Consensus       231 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~  284 (435)
T 1p22_A          231 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTS  284 (435)
T ss_dssp             TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred             CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC
Confidence            9999999999887653    45678899999999  78899999999999999974

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.90  E-value=1.4e-21  Score=123.44  Aligned_cols=124  Identities=16%  Similarity=0.312  Sum_probs=109.0

Q ss_pred             CEEEeCCCCcee---eee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGRQL---QQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~---~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~   75 (131)
                      |++||+++++..   ..+ +|...|.++++  +++.+++++.|+.+++||+.+++. ..+..|...+.++.+  +++.++
T Consensus       235 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~  310 (435)
T 1p22_A          235 IAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVV  310 (435)
T ss_dssp             EEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEE
T ss_pred             EEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEE
Confidence            579999887655   333 78899999999  788999999999999999998875 567789999999988  478999


Q ss_pred             EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.|+.|++||+++++.+ ....|...+.+++|  +++++++++.|+.|++||++
T Consensus       311 ~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~  364 (435)
T 1p22_A          311 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLV  364 (435)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHH
T ss_pred             EEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECC
Confidence            9999999999999999888 66779999999999  78899999999999999973

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.90  E-value=7.4e-22  Score=120.52  Aligned_cols=128  Identities=11%  Similarity=0.105  Sum_probs=92.2

Q ss_pred             CEEEeC-CCCceeeee-cCCCCeEEEEECC---CCCEEEEEeCCCcEEEEeCCCCCe-EEeeccc---cceEEEEEccCC
Q psy15612          1 MYLQSV-SPGRQLQQH-DFSSQIFSLGYCP---SGEWLAVGMENSNVEVLHALKPDK-YQLHLHE---SCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~-~~~~~~~~~-~~~~~v~~~~~~~---~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~---~~v~~~~~~~~~   71 (131)
                      |++|++ ++++.+..+ .|...+..++|+|   ++..|++++.|++|++||+.++++ ..+..|.   ..+.+++|+|+|
T Consensus       159 V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG  238 (356)
T 2w18_A          159 VEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMG  238 (356)
T ss_dssp             EEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETT
T ss_pred             EEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCC
Confidence            456666 335555544 5666666666666   567889999999999999999885 5565443   367788999999


Q ss_pred             CEE------------EEeCCCCeEEEeeCCCCceEE-e-----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         72 KWF------------VSTGKDNLLNAWRTPYGASIF-Q-----SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~~------------~~~~~~~~i~~w~~~~~~~~~-~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.+            ++++.|+++++||..+++.+. .     .+|.....+.++  ++.++++++.|++|++||+.
T Consensus       239 ~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~  313 (356)
T 2w18_A          239 LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLL  313 (356)
T ss_dssp             EEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETT
T ss_pred             CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECC
Confidence            987            457788999999999998762 1     244444544444  37889999999999999974

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.90  E-value=1.9e-21  Score=123.00  Aligned_cols=124  Identities=19%  Similarity=0.260  Sum_probs=108.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+.+++.+..+ +|.+.|.+++|+  +..+++++.|+.|++||+.+++. ..+..|...+.++.|+  ++.+++++
T Consensus       141 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s  216 (445)
T 2ovr_B          141 LKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS  216 (445)
T ss_dssp             EEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEE
T ss_pred             EEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEe
Confidence            589999999988887 799999999996  66999999999999999988775 5667888999999985  66799999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+.+++.. ....|...+.++++  +++++++++.|+.|++||++
T Consensus       217 ~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~  267 (445)
T 2ovr_B          217 RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE  267 (445)
T ss_dssp             TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGG
T ss_pred             CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECC
Confidence            9999999999988877 66678899999998  67889999999999999864

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.89  E-value=4.8e-21  Score=120.64  Aligned_cols=129  Identities=17%  Similarity=0.143  Sum_probs=106.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEE-EEeCCCc--EEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLA-VGMENSN--VEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~--v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+++++......+...+.+++|+|+|+.|+ +++.++.  |.+||+.+++...+..+...+.+++|+|||+.++.+
T Consensus       205 i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~  284 (415)
T 2hqs_A          205 LVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFT  284 (415)
T ss_dssp             EEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEE
T ss_pred             EEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEE
Confidence            5799999998876667888999999999999887 5555544  999999988887788888889999999999988877


Q ss_pred             CC-CC--eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC---CcEEEEEe
Q psy15612         78 GK-DN--LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD---KKATVYEV  129 (131)
Q Consensus        78 ~~-~~--~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~vw~~  129 (131)
                      +. ++  .+++||+.+++......+...+.+++|+|+|+++++++.+   ..|.+||+
T Consensus       285 s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~  342 (415)
T 2hqs_A          285 SDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL  342 (415)
T ss_dssp             ECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred             ECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence            65 44  6788899888766555567788999999999999877653   57999986

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.89  E-value=4.1e-21  Score=121.54  Aligned_cols=124  Identities=17%  Similarity=0.242  Sum_probs=107.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ +|...|.++.++  +..+++++.|+.+++||+.+++. ..+..|...+.++.|  +++.+++++
T Consensus       181 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~  256 (445)
T 2ovr_B          181 LKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGA  256 (445)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred             EEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence            589999999888877 788999999984  66799999999999999988775 566788889999988  688899999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||+.+++.+ ....|...+.+++|  +++++++++.|+.|++||++
T Consensus       257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~  307 (445)
T 2ovr_B          257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE  307 (445)
T ss_dssp             TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT
T ss_pred             CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC
Confidence            9999999999988877 56678889999998  78889999999999999974

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.89  E-value=8.3e-21  Score=119.47  Aligned_cols=130  Identities=12%  Similarity=0.059  Sum_probs=109.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++||+++++.+..+.+...+..++|+|+++.+ ++++.++.+.+||+.+++......+...+.+++|+|+++.+++++.
T Consensus       285 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~  364 (433)
T 3bws_A          285 LGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCR  364 (433)
T ss_dssp             EEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEC
T ss_pred             EEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEec
Confidence            469999999888877777789999999999755 5668899999999998876554457778999999999998887765


Q ss_pred             ---------------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612         80 ---------------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEVI  130 (131)
Q Consensus        80 ---------------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~  130 (131)
                                     |+.+++||..+++..........+.+++|+|+++++++++. |+.+++|++.
T Consensus       365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~  431 (433)
T 3bws_A          365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD  431 (433)
T ss_dssp             CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred             CCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence                           46999999999988744445678999999999999887764 9999999984

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.89  E-value=1.2e-22  Score=127.05  Aligned_cols=105  Identities=16%  Similarity=0.186  Sum_probs=90.7

Q ss_pred             ECCCCCEEEEEeCCCcEEEEeCCCCCeE------EeeccccceEEEEEcc--------CCCEEEEeCCCCeEEEeeCCCC
Q psy15612         26 YCPSGEWLAVGMENSNVEVLHALKPDKY------QLHLHESCVLSLRFAA--------CGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        26 ~~~~~~~l~~~~~~~~v~~~~~~~~~~~------~~~~~~~~v~~~~~~~--------~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      +++++..+++++.|+++++||..++...      .+.+|...|.+++|+|        |+++|++++.|+++++||+.++
T Consensus        97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~  176 (393)
T 4gq1_A           97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE  176 (393)
T ss_dssp             CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred             cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence            3445667999999999999999887642      2457999999999998        8899999999999999999887


Q ss_pred             ceE-EecCCCCCeEEEEECCCCC-EEEEecCCCcEEEEEee
Q psy15612         92 ASI-FQSKESSSVLSCDISADDK-YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        92 ~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~vw~~~  130 (131)
                      ... ....+...+.+++|+|++. ++++++.|++|++||++
T Consensus       177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~  217 (393)
T 4gq1_A          177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWT  217 (393)
T ss_dssp             EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred             ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence            766 6777899999999999874 78999999999999974

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.88  E-value=5.3e-21  Score=120.36  Aligned_cols=130  Identities=12%  Similarity=0.070  Sum_probs=110.8

Q ss_pred             CEEEeCCCCceeee-----e-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQQ-----H-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~-----~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      |++||+++++....     + .|...+.+++|+|+++.+++++.++.+++||+.+++. ..+..|...+.+++|+|+++.
T Consensus       146 i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (433)
T 3bws_A          146 MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDL  225 (433)
T ss_dssp             EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTE
T ss_pred             EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCE
Confidence            57999999988763     2 5777899999999999999999999999999988775 556678889999999999998


Q ss_pred             EE-EeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec--------CCCcEEEEEee
Q psy15612         74 FV-STGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS--------GDKKATVYEVI  130 (131)
Q Consensus        74 ~~-~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~vw~~~  130 (131)
                      ++ +++.++.+++||+.+++..........+.+++|+|+++++++++        .|+.|++||++
T Consensus       226 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~  291 (433)
T 3bws_A          226 VYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD  291 (433)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred             EEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence            75 55579999999999988875555566799999999999988877        47899999963

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.86  E-value=8.2e-21  Score=120.21  Aligned_cols=129  Identities=12%  Similarity=0.117  Sum_probs=99.8

Q ss_pred             CEEEeCCCC--------ce---eeee-cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEE
Q psy15612          1 MYLQSVSPG--------RQ---LQQH-DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLR   66 (131)
Q Consensus         1 i~iwd~~~~--------~~---~~~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~   66 (131)
                      |++||++++        +.   ...+ +|...|.+++|+|+ +..+++++.|++|++||++++.. .....|...+.+++
T Consensus       120 v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~  199 (434)
T 2oit_A          120 IAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVC  199 (434)
T ss_dssp             EEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEE
T ss_pred             EEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEE
Confidence            578998654        22   2333 68899999999998 88999999999999999988754 34456788999999


Q ss_pred             EccCCCEEEEeCCCCeEEEeeCCCCceE-EecC-------CCCCeEEEEECCCCCEEEE-ecCCC------cEEEEEee
Q psy15612         67 FAACGKWFVSTGKDNLLNAWRTPYGASI-FQSK-------ESSSVLSCDISADDKYIVT-GSGDK------KATVYEVI  130 (131)
Q Consensus        67 ~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~-------~~~~v~~~~~~~~~~~l~~-~~~d~------~i~vw~~~  130 (131)
                      |+|+|+++++++.|+.+++||.+ ++.. ....       |...+.+++|++++.++++ ...+|      .+++|+++
T Consensus       200 wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~  277 (434)
T 2oit_A          200 WSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP  277 (434)
T ss_dssp             ECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred             EcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence            99999999999999999999998 4443 2221       2237899999998887754 33333      38899874

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.84  E-value=7e-19  Score=105.26  Aligned_cols=128  Identities=12%  Similarity=0.135  Sum_probs=99.6

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC-CCeEEee-cc-ccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK-PDKYQLH-LH-ESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~-~~~~~~~-~~-~~~v~~~~~~~~~~~~~~~   77 (131)
                      |++||+.+++......+...+.+++|+|+++.+++++ ++.+.+||+.+ ++...+. .+ ...+.+++|+|+++.++++
T Consensus        24 i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~  102 (297)
T 2ojh_A           24 IEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAIS  102 (297)
T ss_dssp             EEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEE
T ss_pred             EEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEE
Confidence            5799999988887678889999999999999999886 67999999998 7764443 33 3678899999999999988


Q ss_pred             CC--C--CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEee
Q psy15612         78 GK--D--NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~--~--~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~~  130 (131)
                      +.  +  ..+..++..+++..... ....+..++|+|++++++ +++.++.+++|++.
T Consensus       103 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~  159 (297)
T 2ojh_A          103 DKVEFGKSAIYLLPSTGGTPRLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD  159 (297)
T ss_dssp             ECTTTSSCEEEEEETTCCCCEECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred             EeCCCCcceEEEEECCCCceEEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence            73  3  34555565555544333 333488999999999887 67778999999863

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.82  E-value=8.7e-20  Score=118.88  Aligned_cols=126  Identities=12%  Similarity=-0.027  Sum_probs=104.6

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC----CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN----SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      .+||+++++......+..  .++.|+|||+.+++++.+    ..|.+||+.+++...+..+...+..++|+|||+.++++
T Consensus       135 ~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~  212 (582)
T 3o4h_A          135 ALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGL  212 (582)
T ss_dssp             EEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEE
T ss_pred             eEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEc
Confidence            478998887766654444  789999999999987766    67999999998888888888889999999999999988


Q ss_pred             CCCC--eEEEeeCCCCceEEecCCCCCeEEEE--------ECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 GKDN--LLNAWRTPYGASIFQSKESSSVLSCD--------ISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~--~i~~w~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ..++  .|++||+.+++......+...+..++        |+|+|.++++++.++++++|++
T Consensus       213 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          213 ETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID  274 (582)
T ss_dssp             ECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             cCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence            7788  89999999888774444555566666        9999988888999999999974

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.81  E-value=2.4e-17  Score=100.57  Aligned_cols=128  Identities=8%  Similarity=0.019  Sum_probs=97.9

Q ss_pred             CEEEeCCCCceeeeec-CCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCe-E-EeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQHD-FSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDK-Y-QLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++||.++++.+..+. +...+ .++|+|+++.+++++. ++.+.+||+.+++. . .+..+.....+++|+|+|+++++
T Consensus        22 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~  100 (331)
T 3u4y_A           22 ISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVT  100 (331)
T ss_dssp             EEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEE
T ss_pred             EEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEE
Confidence            5799999999887763 34445 9999999997766655 88999999988874 3 34444444444999999999985


Q ss_pred             eCCCC---eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe-cCCCc-EEEEEe
Q psy15612         77 TGKDN---LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG-SGDKK-ATVYEV  129 (131)
Q Consensus        77 ~~~~~---~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~vw~~  129 (131)
                      +..++   .+.+||+.+++..........+..++|+|+|++++++ ..++. +.+|++
T Consensus       101 ~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~  158 (331)
T 3u4y_A          101 VTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKI  158 (331)
T ss_dssp             CCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred             ecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence            55553   8999999998887555556677999999999866544 55578 999986

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.80  E-value=9.1e-19  Score=116.16  Aligned_cols=128  Identities=12%  Similarity=0.171  Sum_probs=101.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC-----CCeEEeec-cccc-------------
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALK-----PDKYQLHL-HESC-------------   61 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~-----~~~~~~~~-~~~~-------------   61 (131)
                      |++||+.+++......+...+..++|+|||+.|+++ .++.|.+|++.+     ++...+.. +...             
T Consensus       103 i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~  181 (706)
T 2z3z_A          103 LVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFG  181 (706)
T ss_dssp             EEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTT
T ss_pred             EEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcC
Confidence            579999988877666777788899999999999885 678999999988     76544322 2221             


Q ss_pred             -eEEEEEccCCCEEEEeC---------------------------------CCCeEEEeeCCCCceEEec---CCCCCeE
Q psy15612         62 -VLSLRFAACGKWFVSTG---------------------------------KDNLLNAWRTPYGASIFQS---KESSSVL  104 (131)
Q Consensus        62 -v~~~~~~~~~~~~~~~~---------------------------------~~~~i~~w~~~~~~~~~~~---~~~~~v~  104 (131)
                       +.++.|+|||++|++++                                 .+..+.+||+.+++.....   .+...+.
T Consensus       182 ~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~  261 (706)
T 2z3z_A          182 IEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT  261 (706)
T ss_dssp             CCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred             CCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence             47899999999999886                                 3467999999988766322   4567789


Q ss_pred             EEEECCCCCEEEEecCCC-----cEEEEEe
Q psy15612        105 SCDISADDKYIVTGSGDK-----KATVYEV  129 (131)
Q Consensus       105 ~~~~~~~~~~l~~~~~d~-----~i~vw~~  129 (131)
                      +++|+|+|+++++++.++     .+.+||+
T Consensus       262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~  291 (706)
T 2z3z_A          262 NLSWSPDENILYVAEVNRAQNECKVNAYDA  291 (706)
T ss_dssp             EEEECTTSSEEEEEEECTTSCEEEEEEEET
T ss_pred             eEEEECCCCEEEEEEeCCCCCeeEEEEEEC
Confidence            999999999998876665     7888885

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.80  E-value=1.2e-18  Score=115.99  Aligned_cols=120  Identities=13%  Similarity=0.119  Sum_probs=95.5

Q ss_pred             CEEEeCCCCceeeeec-CC------------------------CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC---Ce
Q psy15612          1 MYLQSVSPGRQLQQHD-FS------------------------SQIFSLGYCPSGEWLAVGMENSNVEVLHALKP---DK   52 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~-~~------------------------~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~---~~   52 (131)
                      |++||+.+++....+. +.                        ..+..++|+|||+.|++++. +.+.+||+.++   ..
T Consensus        66 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~  144 (741)
T 2ecf_A           66 LWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAV  144 (741)
T ss_dssp             EEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSC
T ss_pred             EEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceE
Confidence            5789999988776662 22                        23788999999999999886 89999999988   66


Q ss_pred             EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC-CCCC----------------eEEEEECCCCCEE
Q psy15612         53 YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSS----------------VLSCDISADDKYI  115 (131)
Q Consensus        53 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-~~~~----------------v~~~~~~~~~~~l  115 (131)
                      ..+..+...+..++|+|||++++.++ ++.|++||+.+++...... +...                +..++|+|+|++|
T Consensus       145 ~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l  223 (741)
T 2ecf_A          145 RQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAI  223 (741)
T ss_dssp             CBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCE
T ss_pred             EEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEE
Confidence            67777778899999999999998887 5689999999887763332 2221                4779999999999


Q ss_pred             EEecCCC
Q psy15612        116 VTGSGDK  122 (131)
Q Consensus       116 ~~~~~d~  122 (131)
                      ++++.|+
T Consensus       224 ~~~~~d~  230 (741)
T 2ecf_A          224 AYARIDE  230 (741)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEcC
Confidence            8876654

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.80  E-value=7e-18  Score=116.17  Aligned_cols=126  Identities=10%  Similarity=0.092  Sum_probs=106.1

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCC-
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKD-   80 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~-   80 (131)
                      +||+.+++......+...+..++|+|+|+.|++++.++.+.+||+.+++...+. .|...+..++|+|||++++.++.+ 
T Consensus       363 ~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~  442 (1045)
T 1k32_A          363 IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLK  442 (1045)
T ss_dssp             EEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEEC
T ss_pred             EEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCc
Confidence            678887776554577788999999999999999999999999999988875544 788888999999999999887654 


Q ss_pred             ---------CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         81 ---------NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        81 ---------~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                               +.+++||+.+++...+..+...+..++|+|+|+++++++.++...+|+
T Consensus       443 ~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~  499 (1045)
T 1k32_A          443 HGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD  499 (1045)
T ss_dssp             SSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred             cccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence                     389999999888556677788889999999999999888776666665

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.79  E-value=1.2e-18  Score=115.68  Aligned_cols=120  Identities=10%  Similarity=0.001  Sum_probs=92.7

Q ss_pred             CEEEeCCCCceeeeec-CCC---CeEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCCeEEeec---cccceEE
Q psy15612          1 MYLQSVSPGRQLQQHD-FSS---QIFSLGYCPSGEWLAVGMEN---------SNVEVLHALKPDKYQLHL---HESCVLS   64 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~-~~~---~v~~~~~~~~~~~l~~~~~~---------~~v~~~~~~~~~~~~~~~---~~~~v~~   64 (131)
                      |++||+.+++....+. +..   .+.+++|+|||+.|++++.+         +.+.+||+.+++...+..   +...+..
T Consensus        39 i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~  118 (723)
T 1xfd_A           39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQY  118 (723)
T ss_dssp             EEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSB
T ss_pred             EEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccc
Confidence            5799999998877773 333   48999999999999998764         678899999887654443   3334788


Q ss_pred             EEEccCCCEEEEeCCCCeEEEeeCCCCceEEe-cCCCC------------------CeEEEEECCCCCEEEEecCC
Q psy15612         65 LRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESS------------------SVLSCDISADDKYIVTGSGD  121 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-~~~~~------------------~v~~~~~~~~~~~l~~~~~d  121 (131)
                      ++|||||+.++.++. +.|++||..+++.... ..+..                  .+..++|+|+|++|++++.+
T Consensus       119 ~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~  193 (723)
T 1xfd_A          119 AGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN  193 (723)
T ss_dssp             CCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred             cEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence            999999999998875 7899999998876632 22222                  23789999999999887644

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.79  E-value=5.5e-17  Score=105.34  Aligned_cols=129  Identities=12%  Similarity=0.031  Sum_probs=103.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC--CCCCeEEeeccccceEEEEEcc----CCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHA--LKPDKYQLHLHESCVLSLRFAA----CGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~--~~~~~~~~~~~~~~v~~~~~~~----~~~~~   74 (131)
                      |.+||..+++++..+.....+..++|+|+|+++++++.++.|.+||+  .+.++.....+...+..++|+|    ||+++
T Consensus       161 V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l  240 (543)
T 1nir_A          161 IALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYT  240 (543)
T ss_dssp             EEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEE
T ss_pred             EEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEE
Confidence            57899999999988853334889999999999999999999999999  6666533233556789999999    99999


Q ss_pred             EEeCC-CCeEEEeeCCCCceEE-ecC----------C-CCCeEEEEECCCCCE-EEEecCCCcEEEEEe
Q psy15612         75 VSTGK-DNLLNAWRTPYGASIF-QSK----------E-SSSVLSCDISADDKY-IVTGSGDKKATVYEV  129 (131)
Q Consensus        75 ~~~~~-~~~i~~w~~~~~~~~~-~~~----------~-~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~  129 (131)
                      ++++. ++.+.+||..+++.+. ...          | ...+..+.++|+++. +++...+++|.+||+
T Consensus       241 ~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~  309 (543)
T 1nir_A          241 IAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY  309 (543)
T ss_dssp             EEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred             EEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEe
Confidence            88874 8999999999988872 221          1 237889999997765 466677899999986

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.79  E-value=8.5e-18  Score=102.44  Aligned_cols=128  Identities=5%  Similarity=-0.008  Sum_probs=99.6

Q ss_pred             CEEEeCCCCceeeeecCCC---CeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeEE-eec-c----ccceEEEEEccC
Q psy15612          1 MYLQSVSPGRQLQQHDFSS---QIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKYQ-LHL-H----ESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~~-~~~-~----~~~v~~~~~~~~   70 (131)
                      |++||+.+++.+..+....   .+..++|+|+++.++ +...++.|.+||+.+++... +.. +    ...+..++|+|+
T Consensus        13 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d   92 (337)
T 1pby_B           13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPD   92 (337)
T ss_dssp             EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTT
T ss_pred             EEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCC
Confidence            5789999999888775444   588999999998765 45557899999998887533 322 1    125778999999


Q ss_pred             CCEEEEeC------------CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         71 GKWFVSTG------------KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        71 ~~~~~~~~------------~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.+++++            .++.+.+||..+++..........+..++|+|++++++++  ++.+.+||+.
T Consensus        93 g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~  162 (337)
T 1pby_B           93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPE  162 (337)
T ss_dssp             SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETT
T ss_pred             CCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECC
Confidence            99888875            5789999999988877443445667889999999988877  5789999863

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.78  E-value=5.6e-18  Score=103.46  Aligned_cols=129  Identities=14%  Similarity=0.169  Sum_probs=97.0

Q ss_pred             CEEEeCC-CC--ceeeeecCCCCeEEEEECCCCCEEEEEeCC-CcEEEEeCC--CCCeE---EeeccccceEEEEEccCC
Q psy15612          1 MYLQSVS-PG--RQLQQHDFSSQIFSLGYCPSGEWLAVGMEN-SNVEVLHAL--KPDKY---QLHLHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~v~~~~~~--~~~~~---~~~~~~~~v~~~~~~~~~   71 (131)
                      |++||+. ++  +.+..+.+...+..++|+|+++.+++++.+ +.+.+|++.  ++...   .+.. ...+..++|+|++
T Consensus        17 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg   95 (343)
T 1ri6_A           17 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-PGSLTHISTDHQG   95 (343)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-SSCCSEEEECTTS
T ss_pred             EEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-CCCCcEEEEcCCC
Confidence            5789985 34  334445777889999999999998888876 899999987  55532   2232 3378899999999


Q ss_pred             CEEEEeC-CCCeEEEeeCCCC---ceEEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612         72 KWFVSTG-KDNLLNAWRTPYG---ASIFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI  130 (131)
Q Consensus        72 ~~~~~~~-~~~~i~~w~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~  130 (131)
                      +.+++++ .++.+.+||+.++   +..........+.+++|+|+++++++++ .++.+.+||+.
T Consensus        96 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~  159 (343)
T 1ri6_A           96 QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS  159 (343)
T ss_dssp             SEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             CEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence            9876655 4788999999533   3333334555688999999999887776 78999999974

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.78  E-value=7e-17  Score=96.57  Aligned_cols=129  Identities=15%  Similarity=0.151  Sum_probs=97.4

Q ss_pred             CEEEeCCC-Cceeeee-cC-CCCeEEEEECCCCCEEEEEeC--CC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSP-GRQLQQH-DF-SSQIFSLGYCPSGEWLAVGME--NS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~-~~~~~~~-~~-~~~v~~~~~~~~~~~l~~~~~--~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      |++||+++ ++..... .+ ...+.+++|+|+++.++++..  ++  .+..++..++....+..+. .+..++|+|+++.
T Consensus        64 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~  142 (297)
T 2ojh_A           64 LYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKS  142 (297)
T ss_dssp             EEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSE
T ss_pred             EEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCE
Confidence            57899998 7776665 33 367889999999999999883  33  4555555666555544443 4888999999998


Q ss_pred             EE-EeCCCCeEEEeeC--CCCceEEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612         74 FV-STGKDNLLNAWRT--PYGASIFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI  130 (131)
Q Consensus        74 ~~-~~~~~~~i~~w~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~  130 (131)
                      ++ +++.++.+.+|++  .+++......+...+.+++|+|++++++.++ .++.+.+|++.
T Consensus       143 l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~  203 (297)
T 2ojh_A          143 FTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR  203 (297)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             EEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence            77 6778888888874  4555556666778899999999999887655 58899999874

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.78  E-value=4.2e-17  Score=99.39  Aligned_cols=126  Identities=15%  Similarity=0.121  Sum_probs=98.3

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeec----------------------
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHL----------------------   57 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~----------------------   57 (131)
                      |++||+++++.+..+.....+..++|+|+++.++++  ++.+.+||+.+++.. .+..                      
T Consensus       117 i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~  194 (337)
T 1pby_B          117 VALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES  194 (337)
T ss_dssp             EEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTT
T ss_pred             EEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccC
Confidence            478999988888777556678889999999988877  578999998766532 1111                      


Q ss_pred             --------------------------------------------cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612         58 --------------------------------------------HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        58 --------------------------------------------~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~   93 (131)
                                                                  +...+..++|+|++++++++  ++.+.+||+.+++.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~  272 (337)
T 1pby_B          195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS  272 (337)
T ss_dssp             TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE
T ss_pred             CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC
Confidence                                                        11234568999999998888  78999999998887


Q ss_pred             EEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         94 IFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .........+.+++|+|+++++++++.++.|.+||+.
T Consensus       273 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~  309 (337)
T 1pby_B          273 IKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE  309 (337)
T ss_dssp             EEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred             cceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence            7444455678899999999999888889999999963

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.78  E-value=1.4e-18  Score=115.53  Aligned_cols=117  Identities=9%  Similarity=0.127  Sum_probs=91.2

Q ss_pred             CEEEeCCCCceeeeecCCC----CeEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCCe---EEeeccccceEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSS----QIFSLGYCPSGEWLAVGME---------NSNVEVLHALKPDK---YQLHLHESCVLS   64 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~---------~~~v~~~~~~~~~~---~~~~~~~~~v~~   64 (131)
                      |++||+.+++....+.+..    .+.+++|||||+.|++++.         ++.+.+||+.+++.   ..+   ...+..
T Consensus        38 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~  114 (719)
T 1z68_A           38 IVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQY  114 (719)
T ss_dssp             EEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCC
T ss_pred             EEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Cccccc
Confidence            5799999998877774332    3889999999999988766         68999999998876   333   245788


Q ss_pred             EEEccCCCEEEEeCCCCeEEEeeCCCCceEEec--CCCCCe-----------------EEEEECCCCCEEEEecCC
Q psy15612         65 LRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSV-----------------LSCDISADDKYIVTGSGD  121 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~--~~~~~v-----------------~~~~~~~~~~~l~~~~~d  121 (131)
                      ++|||||+.++.+. ++.|++|+..+++.....  ++...+                 ..++|+|||++|++++.|
T Consensus       115 ~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d  189 (719)
T 1z68_A          115 LCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN  189 (719)
T ss_dssp             EEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred             ceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence            99999999998875 789999999888766322  222222                 489999999999987754

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.77  E-value=1.2e-16  Score=97.42  Aligned_cols=129  Identities=10%  Similarity=0.056  Sum_probs=98.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCc-EEEEeCCCCC-e----EEeeccccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSN-VEVLHALKPD-K----YQLHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~-v~~~~~~~~~-~----~~~~~~~~~v~~~~~~~~~~~   73 (131)
                      |++||+++++.+..+.....+..++|+|+|+.++++ ..++. +.+|++.... .    .........+..++|+|+|++
T Consensus       110 i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~  189 (331)
T 3u4y_A          110 MQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNF  189 (331)
T ss_dssp             EEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSE
T ss_pred             EEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCE
Confidence            578999999988888667778999999999866554 55578 9999987533 2    122233456789999999996


Q ss_pred             EE-EeCCCCeEEEeeCCCCce---EEecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612         74 FV-STGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEV  129 (131)
Q Consensus        74 ~~-~~~~~~~i~~w~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~  129 (131)
                      ++ +...++.+.+||+.+++.   .........+..++|+|+|++++.++ .++.|.+||+
T Consensus       190 l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~  250 (331)
T 3u4y_A          190 AFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ  250 (331)
T ss_dssp             EEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred             EEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence            65 455688999999998887   54444567778999999999776554 4678999986

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.77  E-value=1.8e-17  Score=114.12  Aligned_cols=128  Identities=13%  Similarity=0.142  Sum_probs=107.9

Q ss_pred             CEEEeCCCCceeeeecCCC-CeEEEEECCCCCEEEEEeCCCcEE-EEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSS-QIFSLGYCPSGEWLAVGMENSNVE-VLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~v~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++|++.+++......+.. .+..++|+ +|+.+++++.+..+. +|++.++....+..+...+..++|+|||+.+++++
T Consensus       319 i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~  397 (1045)
T 1k32_A          319 AFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAN  397 (1045)
T ss_dssp             EEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEE
T ss_pred             EEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEEC
Confidence            4678888777665456666 89999999 999999988887888 88998887766667778899999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCC----------CcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGD----------KKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~vw~~  129 (131)
                      .++.+++||+.+++.. ....+...+..++|+|+|+++++++.+          +.+.+||+
T Consensus       398 ~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~  459 (1045)
T 1k32_A          398 DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM  459 (1045)
T ss_dssp             TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred             CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence            9999999999999887 444788888999999999999877654          38999986

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.76  E-value=7.2e-17  Score=99.03  Aligned_cols=130  Identities=13%  Similarity=0.032  Sum_probs=103.1

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCe-EEeecccc---------ceEEEEEcc
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDK-YQLHLHES---------CVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~-~~~~~~~~---------~v~~~~~~~   69 (131)
                      |.+||..+++.+..+.....+..++|+|+++.++.+ ..++.+.+||..+++. ..+..+..         .+..+.|+|
T Consensus        71 v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  150 (353)
T 3vgz_A           71 VYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD  150 (353)
T ss_dssp             EEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET
T ss_pred             EEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC
Confidence            478999999988887666678889999999966554 5578999999998875 33333221         268899999


Q ss_pred             CCCEEEEeC--CCCeEEEeeCCCCceEEecC-CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         70 CGKWFVSTG--KDNLLNAWRTPYGASIFQSK-ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        70 ~~~~~~~~~--~~~~i~~w~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++.++.++  .++.+.+||..+++...... +...+..++|+|+++++++++.++.+.+||+.
T Consensus       151 dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~  214 (353)
T 3vgz_A          151 ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTA  214 (353)
T ss_dssp             TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETT
T ss_pred             CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECC
Confidence            999877665  47889999999988874443 56668899999999999999889999999863

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.75  E-value=8.7e-17  Score=98.20  Aligned_cols=129  Identities=11%  Similarity=0.114  Sum_probs=94.1

Q ss_pred             CEEEeCC--CCce--eeeecCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCC---CeEEeeccccceEEEEEccCCC
Q psy15612          1 MYLQSVS--PGRQ--LQQHDFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKP---DKYQLHLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~--~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~   72 (131)
                      |++|++.  +++.  +..+.....+..++|+|+++.+++++. ++.+.+|++..+   ...........+.+++|+|+++
T Consensus        62 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~  141 (343)
T 1ri6_A           62 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNR  141 (343)
T ss_dssp             EEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSS
T ss_pred             EEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCC
Confidence            4688887  5553  333444447889999999998877665 788999999422   2222233445688999999999


Q ss_pred             EEEEeC-CCCeEEEeeCCC-CceEE------ecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612         73 WFVSTG-KDNLLNAWRTPY-GASIF------QSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV  129 (131)
Q Consensus        73 ~~~~~~-~~~~i~~w~~~~-~~~~~------~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~  129 (131)
                      .+++++ .++.+.+||+.+ ++...      .......+..++|+|++++++.+ ..++.+.+|++
T Consensus       142 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~  207 (343)
T 1ri6_A          142 TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL  207 (343)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred             EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence            887776 789999999987 65431      22245678899999999977554 47889999997

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.75  E-value=5.3e-16  Score=95.19  Aligned_cols=129  Identities=10%  Similarity=0.019  Sum_probs=101.3

Q ss_pred             CEEEeCCCCceeeeecCC--C--------CeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCeEE-eeccccceEEEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFS--S--------QIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDKYQ-LHLHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~--~--------~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~   67 (131)
                      |.+||.++++.+..+...  .        .+..+.|+|+++.+++++  .++.|.+||..+++... +..+...+..++|
T Consensus       113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~  192 (353)
T 3vgz_A          113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL  192 (353)
T ss_dssp             EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred             EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence            478999999887776321  1        278899999999877765  47889999999887644 3335556889999


Q ss_pred             ccCCCEEEEeCCCCeEEEeeCCCCceEE-ec----CCCCCeEEEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612         68 AACGKWFVSTGKDNLLNAWRTPYGASIF-QS----KESSSVLSCDISADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus        68 ~~~~~~~~~~~~~~~i~~w~~~~~~~~~-~~----~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~  129 (131)
                      +|+++.+++++.++.+.+||..+++... ..    ++...+..++|+|++++++.++. ++.+.+||+
T Consensus       193 s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~  260 (353)
T 3vgz_A          193 DSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT  260 (353)
T ss_dssp             ETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence            9999999999999999999999988772 22    24556788999999997766554 589999986

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.73  E-value=1.3e-15  Score=93.64  Aligned_cols=130  Identities=8%  Similarity=-0.019  Sum_probs=93.7

Q ss_pred             CEEEeCCCCce--eeee-cCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCC-CCCeEE---eec---------cccceE
Q psy15612          1 MYLQSVSPGRQ--LQQH-DFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHAL-KPDKYQ---LHL---------HESCVL   63 (131)
Q Consensus         1 i~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~-~~~~~~---~~~---------~~~~v~   63 (131)
                      |++||+.+++.  +..+ .+...+..++|+|+|+.|++++ .++.+.+|++. .+....   +..         ....+.
T Consensus        65 v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~  144 (347)
T 3hfq_A           65 IAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH  144 (347)
T ss_dssp             EEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE
T ss_pred             EEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce
Confidence            46899876653  3332 4667788999999999888887 67889999995 333322   111         112478


Q ss_pred             EEEEccCCCEEEEeCCCCeEEEeeCC-CCceEE----ecCCCCCeEEEEECCCCCEEEE-ecCCCcEEEEEee
Q psy15612         64 SLRFAACGKWFVSTGKDNLLNAWRTP-YGASIF----QSKESSSVLSCDISADDKYIVT-GSGDKKATVYEVI  130 (131)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~i~~w~~~-~~~~~~----~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~~  130 (131)
                      +++|+|+|+.+++...++.+.+|++. +++...    .......+..++|+|+|+++++ ...++.+.+|++.
T Consensus       145 ~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~  217 (347)
T 3hfq_A          145 YTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD  217 (347)
T ss_dssp             EEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             EEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence            89999999966666778899999998 555431    2234457889999999996655 5567899999874

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.73  E-value=1.5e-16  Score=105.68  Aligned_cols=130  Identities=14%  Similarity=0.158  Sum_probs=98.0

Q ss_pred             CEEEeCCC-----Cceeeee-cCCCC--------------eEEEEECCCCCEEEEEe-----------------------
Q psy15612          1 MYLQSVSP-----GRQLQQH-DFSSQ--------------IFSLGYCPSGEWLAVGM-----------------------   37 (131)
Q Consensus         1 i~iwd~~~-----~~~~~~~-~~~~~--------------v~~~~~~~~~~~l~~~~-----------------------   37 (131)
                      |++||+.+     ++..... .....              +..+.|+|||+.|++++                       
T Consensus       143 i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~  222 (706)
T 2z3z_A          143 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP  222 (706)
T ss_dssp             EEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred             EEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence            57899988     7766554 22222              47899999999999887                       


Q ss_pred             ----------CCCcEEEEeCCCCCeEEee---ccccceEEEEEccCCCEEEEeCCCC-----eEEEeeCCCC-ceEEe--
Q psy15612         38 ----------ENSNVEVLHALKPDKYQLH---LHESCVLSLRFAACGKWFVSTGKDN-----LLNAWRTPYG-ASIFQ--   96 (131)
Q Consensus        38 ----------~~~~v~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~-----~i~~w~~~~~-~~~~~--   96 (131)
                                .+..+.+||+.+++...+.   .+...+..++|+|||+.+++++.++     .+.+||..++ .....  
T Consensus       223 ~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~  302 (706)
T 2z3z_A          223 LYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV  302 (706)
T ss_dssp             ECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred             eeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE
Confidence                      3467999999888764433   4567789999999999998876665     8999999988 43322  


Q ss_pred             cCCCC---CeEEEEECC--CCCEEEEecCCCcEEEEEee
Q psy15612         97 SKESS---SVLSCDISA--DDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        97 ~~~~~---~v~~~~~~~--~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .....   .+..++|+|  +|+++++++.|+.+++|++.
T Consensus       303 ~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~  341 (706)
T 2z3z_A          303 ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD  341 (706)
T ss_dssp             EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred             ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence            12222   246789999  99999999889999999763

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.72  E-value=3.1e-16  Score=104.59  Aligned_cols=110  Identities=7%  Similarity=0.031  Sum_probs=91.1

Q ss_pred             CCCeEEEEECCCCCEEEEEeC-CC-----cEEEEeCCCCCeEEeec-cc------------------------cceEEEE
Q psy15612         18 SSQIFSLGYCPSGEWLAVGME-NS-----NVEVLHALKPDKYQLHL-HE------------------------SCVLSLR   66 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~-~~-----~v~~~~~~~~~~~~~~~-~~------------------------~~v~~~~   66 (131)
                      ...+..++|+|||+.|++++. ++     .|.+||+.+++...+.. +.                        ..+..++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            346899999999999999988 77     89999999887644332 22                        2378899


Q ss_pred             EccCCCEEEEeCCCCeEEEeeCCCC---ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         67 FAACGKWFVSTGKDNLLNAWRTPYG---ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        67 ~~~~~~~~~~~~~~~~i~~w~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |+|||+++++++. +.+++||+.++   +...+..+...+..++|+|+|++++.++ ++.|.+||+
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~  179 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDL  179 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEET
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEec
Confidence            9999999998876 89999999988   5556666778899999999999998887 468999986

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.72  E-value=1.8e-15  Score=93.43  Aligned_cols=114  Identities=10%  Similarity=0.086  Sum_probs=84.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCeEE---ee---ccccceEEEEEccCCCEEEEeCCC--CeEEEe
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALKPDKYQ---LH---LHESCVLSLRFAACGKWFVSTGKD--NLLNAW   86 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~~~~---~~---~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~w   86 (131)
                      .....+..++|+|+|+++++++ .++.|.+|++.++....   +.   .+...+..++|+|||++++++..+  +.+.+|
T Consensus       208 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~  287 (361)
T 3scy_A          208 APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIF  287 (361)
T ss_dssp             CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred             CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence            4556688999999999887776 58899999998665422   21   223446799999999998776554  889999


Q ss_pred             eCC--CCceE--EecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612         87 RTP--YGASI--FQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEV  129 (131)
Q Consensus        87 ~~~--~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~  129 (131)
                      ++.  +++..  ........+..++|+|+|+++++++ .++.+.+|++
T Consensus       288 ~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~  335 (361)
T 3scy_A          288 KVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFER  335 (361)
T ss_dssp             EECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred             EEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence            985  45533  2222256788999999999888776 5788999865

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.72  E-value=1.1e-16  Score=107.12  Aligned_cols=128  Identities=9%  Similarity=0.058  Sum_probs=96.2

Q ss_pred             CEEEeCCCCceeeee-cCCC-----CeEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCCeEEeeccccceEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSS-----QIFSLGYCPSGEWLAVGMEN---------SNVEVLHALKPDKYQLHLHESCVLSL   65 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~-----~v~~~~~~~~~~~l~~~~~~---------~~v~~~~~~~~~~~~~~~~~~~v~~~   65 (131)
                      |++||+.++++...+ .+..     ....+.|||||+.|+.++.+         +.+.+||+.+++...+..+...+...
T Consensus        38 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~  117 (740)
T 4a5s_A           38 ILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWV  117 (740)
T ss_dssp             EEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEE
T ss_pred             EEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceee
Confidence            579999999887666 3332     22448899999999988765         55679999999887777778889999


Q ss_pred             EEccCCCEEEEeCCCCeEEEeeCCCCceEEec--CCCCCe-----------------EEEEECCCCCEEEEecCC-CcEE
Q psy15612         66 RFAACGKWFVSTGKDNLLNAWRTPYGASIFQS--KESSSV-----------------LSCDISADDKYIVTGSGD-KKAT  125 (131)
Q Consensus        66 ~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~--~~~~~v-----------------~~~~~~~~~~~l~~~~~d-~~i~  125 (131)
                      +|||||+.++.+ .++.|++|+..+++...+.  ++...+                 ..+.|||||++|+.++.| +.+.
T Consensus       118 ~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~  196 (740)
T 4a5s_A          118 TWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVP  196 (740)
T ss_dssp             EECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCC
T ss_pred             EECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCc
Confidence            999999999887 4789999999887765322  222222                 358999999999887644 3355


Q ss_pred             EEEe
Q psy15612        126 VYEV  129 (131)
Q Consensus       126 vw~~  129 (131)
                      +|++
T Consensus       197 ~~~~  200 (740)
T 4a5s_A          197 LIEY  200 (740)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            5554

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.71  E-value=1.2e-15  Score=99.09  Aligned_cols=130  Identities=8%  Similarity=0.051  Sum_probs=102.6

Q ss_pred             CEEEeC--CCCceeeeecCCCCeEEEEECC----CCCEEEEEeC-CCcEEEEeCCCCCeE-Eeec----------c-ccc
Q psy15612          1 MYLQSV--SPGRQLQQHDFSSQIFSLGYCP----SGEWLAVGME-NSNVEVLHALKPDKY-QLHL----------H-ESC   61 (131)
Q Consensus         1 i~iwd~--~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-~~~v~~~~~~~~~~~-~~~~----------~-~~~   61 (131)
                      |++||+  .+++.+..+.+...+..++|+|    +|+++++++. ++++.+||..+.++. .+..          | ...
T Consensus       202 V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~  281 (543)
T 1nir_A          202 IDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR  281 (543)
T ss_dssp             EEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCC
T ss_pred             EEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCc
Confidence            579999  8888888887777889999999    9999988874 799999999888753 3332          2 236


Q ss_pred             eEEEEEccCCCE-EEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEee
Q psy15612         62 VLSLRFAACGKW-FVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEVI  130 (131)
Q Consensus        62 v~~~~~~~~~~~-~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~  130 (131)
                      +..+.++|+++. +++...++.|.+||..+.+.+  ....+...+..++|+|+|++++++ ..+++|.+||+.
T Consensus       282 v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~  354 (543)
T 1nir_A          282 VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK  354 (543)
T ss_dssp             EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred             eEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence            889999997765 556678899999999876654  233466778899999999987654 458899999963

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.71  E-value=5.8e-16  Score=94.81  Aligned_cols=125  Identities=10%  Similarity=0.062  Sum_probs=91.9

Q ss_pred             CEEEeCCCCcee---eeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeeccc-----------------
Q psy15612          1 MYLQSVSPGRQL---QQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHE-----------------   59 (131)
Q Consensus         1 i~iwd~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~-----------------   59 (131)
                      |.+||+++++..   ....+...+.+++|+|+++ ++.++.  .+.+||+.+++.. .+....                 
T Consensus       127 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (349)
T 1jmx_B          127 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH  203 (349)
T ss_dssp             EEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred             EEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecC
Confidence            468898875433   3344555788999999999 555543  4999999877642 222111                 


Q ss_pred             ---------------------------------------------------cceEEEEEcc-CCCEEEEeCCCCeEEEee
Q psy15612         60 ---------------------------------------------------SCVLSLRFAA-CGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        60 ---------------------------------------------------~~v~~~~~~~-~~~~~~~~~~~~~i~~w~   87 (131)
                                                                         ..+..+.|+| +++.++++  ++.+.+||
T Consensus       204 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d  281 (349)
T 1jmx_B          204 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYD  281 (349)
T ss_dssp             CCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEE
T ss_pred             CCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEE
Confidence                                                               1345677789 99998888  88999999


Q ss_pred             CCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         88 TPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.+++..........+.+++|+|+++++++++.++.|.+||+.
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~  324 (349)
T 1jmx_B          282 LKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD  324 (349)
T ss_dssp             TTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred             CccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEecc
Confidence            9998877444445567899999999988888888999999963

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.71  E-value=2.3e-16  Score=96.59  Aligned_cols=126  Identities=10%  Similarity=0.033  Sum_probs=93.9

Q ss_pred             CEEEeCCCCceeeeecCCC--CeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeE-Eeecc------ccceEEEEEccC
Q psy15612          1 MYLQSVSPGRQLQQHDFSS--QIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKY-QLHLH------ESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~-~~~~~------~~~v~~~~~~~~   70 (131)
                      |++||..+++.+..+....  .+..++|+|+++.++ +...++.|.+||+.+++.. .+...      ...+..++|+|+
T Consensus        23 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd  102 (349)
T 1jmx_B           23 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD  102 (349)
T ss_dssp             EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred             EEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCC
Confidence            5799999998887774444  678999999998665 4456889999999887753 33322      223778999999


Q ss_pred             CCEEEEeCCC------------CeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         71 GKWFVSTGKD------------NLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        71 ~~~~~~~~~~------------~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |+++++++.+            +.+.+||+.+++..   ....+...+.+++|+|+++ ++.++.  .+.+||+
T Consensus       103 g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~  173 (349)
T 1jmx_B          103 GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDV  173 (349)
T ss_dssp             SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECT
T ss_pred             CCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeC
Confidence            9999988765            89999999875433   2233445688899999999 555543  4888885

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.71  E-value=8.1e-16  Score=94.50  Aligned_cols=127  Identities=11%  Similarity=0.059  Sum_probs=91.0

Q ss_pred             EEeCCCCceee--eecCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEE---eeccccceEEEEEccCCCEE
Q psy15612          3 LQSVSPGRQLQ--QHDFSSQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQ---LHLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         3 iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~   74 (131)
                      .||.++++...  ...+...+..++|+|+|+ +++++.   ++.|.+|++.++....   +..+...+..++|+|+|+++
T Consensus        22 ~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l  100 (347)
T 3hfq_A           22 TLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLV  100 (347)
T ss_dssp             EEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEE
T ss_pred             EEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEE
Confidence            34555666543  235567788899999999 555443   5789999997766432   34466778899999999988


Q ss_pred             EEeC-CCCeEEEeeCC-CCceE--EecC----------CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         75 VSTG-KDNLLNAWRTP-YGASI--FQSK----------ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        75 ~~~~-~~~~i~~w~~~-~~~~~--~~~~----------~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++++ .++.+.+|++. ++...  ....          ....+.+++|+|+|+++++...++.+.+|++.
T Consensus       101 ~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~  170 (347)
T 3hfq_A          101 YSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS  170 (347)
T ss_dssp             EEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred             EEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence            8776 67899999985 34332  1111          12348889999999966666678899999974

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.70  E-value=1.9e-16  Score=105.33  Aligned_cols=128  Identities=11%  Similarity=0.050  Sum_probs=94.0

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-cccc---------------
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-HESC---------------   61 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~~~---------------   61 (131)
                      |++||+++++.....   .+...+..++|+|||+.|+.++. +.|.+|++.+++...+.. +...               
T Consensus        93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~  171 (723)
T 1xfd_A           93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI  171 (723)
T ss_dssp             EEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred             EEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence            469999988763222   33445889999999999999876 789999998877654432 2222               


Q ss_pred             ---eEEEEEccCCCEEEEeCCCC----------------------------------eEEEeeCCCCceE-EecCC----
Q psy15612         62 ---VLSLRFAACGKWFVSTGKDN----------------------------------LLNAWRTPYGASI-FQSKE----   99 (131)
Q Consensus        62 ---v~~~~~~~~~~~~~~~~~~~----------------------------------~i~~w~~~~~~~~-~~~~~----   99 (131)
                         +..+.|+|||+.|+.++.++                                  .+++||+.+++.. .+..+    
T Consensus       172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~  251 (723)
T 1xfd_A          172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR  251 (723)
T ss_dssp             SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred             ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence               37899999999998876442                                  7899999888753 33322    


Q ss_pred             --CCCeEEEEECCCCCEEEEecC----CCcEEEEEe
Q psy15612        100 --SSSVLSCDISADDKYIVTGSG----DKKATVYEV  129 (131)
Q Consensus       100 --~~~v~~~~~~~~~~~l~~~~~----d~~i~vw~~  129 (131)
                        ...+..++|+|+|+++++.+.    +..|.+||+
T Consensus       252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~  287 (723)
T 1xfd_A          252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA  287 (723)
T ss_dssp             GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred             CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence              567899999999998866532    346888885

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.68  E-value=1.4e-15  Score=99.20  Aligned_cols=108  Identities=14%  Similarity=0.018  Sum_probs=84.9

Q ss_pred             CeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC----CeEEEeeCCCCceE
Q psy15612         20 QIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD----NLLNAWRTPYGASI   94 (131)
Q Consensus        20 ~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~i~~w~~~~~~~~   94 (131)
                      .+...+|+|+++. +++...++.+.+||+.+++...+..+..  .++.|+|||+.+++++.+    ..|++||+.+++..
T Consensus       111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~  188 (582)
T 3o4h_A          111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR  188 (582)
T ss_dssp             SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred             CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence            3446688888764 3333444556699999888766655444  789999999999977766    67999999988887


Q ss_pred             EecCCCCCeEEEEECCCCCEEEEecCCC--cEEEEEe
Q psy15612         95 FQSKESSSVLSCDISADDKYIVTGSGDK--KATVYEV  129 (131)
Q Consensus        95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~vw~~  129 (131)
                      .+..+...+..++|+|||++++++..++  .|.+||+
T Consensus       189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~  225 (582)
T 3o4h_A          189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDP  225 (582)
T ss_dssp             EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred             EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcC
Confidence            7777888899999999999999877788  7888875

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.68  E-value=1.3e-15  Score=100.62  Aligned_cols=112  Identities=13%  Similarity=0.002  Sum_probs=87.5

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCC----------CcEEEEeCCC------CCeEEee-ccccceEEEEEccCCCEEEEeCC
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMEN----------SNVEVLHALK------PDKYQLH-LHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~----------~~v~~~~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      +...+..++|+|||+.|++++.+          ..|.+|++.+      +....+. .+...+..++|||||++|+..+.
T Consensus       128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~  207 (662)
T 3azo_A          128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAW  207 (662)
T ss_dssp             TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred             CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEEC
Confidence            56678999999999999988766          5799999988      6666666 66677888999999999987764


Q ss_pred             C--------CeEEEeeCC-CC---ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         80 D--------NLLNAWRTP-YG---ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        80 ~--------~~i~~w~~~-~~---~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +        ..|++||+. ++   +.. ....+...+..++|+|+|++++++..++..++|.
T Consensus       208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~  269 (662)
T 3azo_A          208 DHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHR  269 (662)
T ss_dssp             CTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEE
T ss_pred             CCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEE
Confidence            4        379999998 56   333 3334568899999999999777877788545554

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.67  E-value=2.5e-14  Score=88.34  Aligned_cols=111  Identities=14%  Similarity=0.142  Sum_probs=80.8

Q ss_pred             CeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCC-------e-------EEeeccccceEEEEEccCCCEEEEeC-CCCeE
Q psy15612         20 QIFSLGYCPSGEWLAVGM-ENSNVEVLHALKPD-------K-------YQLHLHESCVLSLRFAACGKWFVSTG-KDNLL   83 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~-------~-------~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i   83 (131)
                      .+..++|+|+|+++++++ .++.+.+|++....       +       .........+..++|+|||+++++++ .++.+
T Consensus       156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v  235 (361)
T 3scy_A          156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV  235 (361)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred             cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence            357899999999776655 47889999876432       1       11223345678999999999877665 68899


Q ss_pred             EEeeCCCCceE---Ee---cCCCCCeEEEEECCCCCEEEEecC--CCcEEEEEee
Q psy15612         84 NAWRTPYGASI---FQ---SKESSSVLSCDISADDKYIVTGSG--DKKATVYEVI  130 (131)
Q Consensus        84 ~~w~~~~~~~~---~~---~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vw~~~  130 (131)
                      .+|++.+++..   ..   ..+...+..++|+|+|++++++..  ++.+.+|++.
T Consensus       236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~  290 (361)
T 3scy_A          236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD  290 (361)
T ss_dssp             EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred             EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence            99999877653   11   123355789999999998866655  4789999973

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.66  E-value=3.2e-15  Score=100.05  Aligned_cols=128  Identities=10%  Similarity=0.094  Sum_probs=93.6

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccce-----------------
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCV-----------------   62 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v-----------------   62 (131)
                      .+||+++++......+.+.+...+|||||+.|+.+. ++.|.+|++.++....+.  ++...+                 
T Consensus        95 ~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~  173 (740)
T 4a5s_A           95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY  173 (740)
T ss_dssp             EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred             EEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence            589999998776557778899999999999999885 578999999887765443  222222                 


Q ss_pred             EEEEEccCCCEEEEeCCCC------------------------------------eEEEeeCCC---C---ceEEec---
Q psy15612         63 LSLRFAACGKWFVSTGKDN------------------------------------LLNAWRTPY---G---ASIFQS---   97 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~------------------------------------~i~~w~~~~---~---~~~~~~---   97 (131)
                      ..+.|||||+.|+..+.|.                                    .+++||+.+   +   +...+.   
T Consensus       174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~  253 (740)
T 4a5s_A          174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA  253 (740)
T ss_dssp             BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred             cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence            3489999999998764221                                    478899988   7   333332   


Q ss_pred             ---CCCCCeEEEEECCCCCEEEEec----CCCcEEEEEee
Q psy15612         98 ---KESSSVLSCDISADDKYIVTGS----GDKKATVYEVI  130 (131)
Q Consensus        98 ---~~~~~v~~~~~~~~~~~l~~~~----~d~~i~vw~~~  130 (131)
                         .+...+..++|+|+|+.++...    .+..|.+||+.
T Consensus       254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~  293 (740)
T 4a5s_A          254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD  293 (740)
T ss_dssp             HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE
T ss_pred             cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC
Confidence               2667789999999999665432    23468888864

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.64  E-value=6.9e-15  Score=91.22  Aligned_cols=129  Identities=9%  Similarity=0.050  Sum_probs=91.9

Q ss_pred             CEEEeCC-CCceeeeecC--CCCeEEEEECCCCCE--EEEEe-------------CCCcEEEEeCC-CCCeE-Eee----
Q psy15612          1 MYLQSVS-PGRQLQQHDF--SSQIFSLGYCPSGEW--LAVGM-------------ENSNVEVLHAL-KPDKY-QLH----   56 (131)
Q Consensus         1 i~iwd~~-~~~~~~~~~~--~~~v~~~~~~~~~~~--l~~~~-------------~~~~v~~~~~~-~~~~~-~~~----   56 (131)
                      |.+||+. +++......+  .+.+..++|+|+|+.  ++++.             .++.+.+|++. .++.. .+.    
T Consensus        62 v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~  141 (365)
T 1jof_A           62 WSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY  141 (365)
T ss_dssp             EEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC
T ss_pred             EEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe
Confidence            4689986 7766543322  133556889999995  44442             68899999996 35442 222    


Q ss_pred             ccccceEEEEEccCCCEEEEeC-CCCeEEEeeCC-CCceEE---ec--CCCCCeEEEEECCCCCEEEEecC-CCcEEEEE
Q psy15612         57 LHESCVLSLRFAACGKWFVSTG-KDNLLNAWRTP-YGASIF---QS--KESSSVLSCDISADDKYIVTGSG-DKKATVYE  128 (131)
Q Consensus        57 ~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~-~~~~~~---~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~  128 (131)
                      .+...+.+++|+|||++++++. .++.|.+|++. +++...   ..  .+...+..++|+|+|+++++++. ++.+.+|+
T Consensus       142 ~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~  221 (365)
T 1jof_A          142 QENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV  221 (365)
T ss_dssp             CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence            2456789999999999887764 46789999998 676541   11  13667999999999998877664 67899997


Q ss_pred             e
Q psy15612        129 V  129 (131)
Q Consensus       129 ~  129 (131)
                      +
T Consensus       222 ~  222 (365)
T 1jof_A          222 I  222 (365)
T ss_dssp             E
T ss_pred             E
Confidence            5

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.64  E-value=1.6e-13  Score=85.08  Aligned_cols=130  Identities=11%  Similarity=0.066  Sum_probs=90.8

Q ss_pred             CEEEeCC-CCceeeee-----cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCC-CCCeEE---ee--ccccceEEEEE
Q psy15612          1 MYLQSVS-PGRQLQQH-----DFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHAL-KPDKYQ---LH--LHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~-~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~-~~~~~~---~~--~~~~~v~~~~~   67 (131)
                      +++|++. +++....+     .+...+..++|+|+|+++++++. ++.|.+|++. +++...   +.  .+...+..++|
T Consensus       121 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~  200 (365)
T 1jof_A          121 GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAM  200 (365)
T ss_dssp             EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEE
T ss_pred             EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEE
Confidence            3578886 46554333     24567999999999998887654 6789999998 666432   22  13456899999


Q ss_pred             ccCCCEEEEeCC-CCeEEEeeCC--CCceE------EecCC-----CC------CeEEEE-ECCCCCEEEEecCC-C---
Q psy15612         68 AACGKWFVSTGK-DNLLNAWRTP--YGASI------FQSKE-----SS------SVLSCD-ISADDKYIVTGSGD-K---  122 (131)
Q Consensus        68 ~~~~~~~~~~~~-~~~i~~w~~~--~~~~~------~~~~~-----~~------~v~~~~-~~~~~~~l~~~~~d-~---  122 (131)
                      +|||+++++++. ++.+.+|++.  +++..      .....     ..      .+..++ |+|+|+++++++.+ +   
T Consensus       201 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~  280 (365)
T 1jof_A          201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFEL  280 (365)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTS
T ss_pred             CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCC
Confidence            999998877654 6789998764  55532      11111     11      488999 99999988766542 2   


Q ss_pred             --cEEEEEee
Q psy15612        123 --KATVYEVI  130 (131)
Q Consensus       123 --~i~vw~~~  130 (131)
                        .|.+|++.
T Consensus       281 ~~~i~v~~~~  290 (365)
T 1jof_A          281 QGYIAGFKLR  290 (365)
T ss_dssp             CCEEEEEEEC
T ss_pred             CCeEEEEEEC
Confidence              79999873

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.62  E-value=2.4e-15  Score=100.12  Aligned_cols=106  Identities=7%  Similarity=0.048  Sum_probs=83.3

Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecccc----ceEEEEEccCCCEEEEeCC---------CCeEEEeeC
Q psy15612         22 FSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHES----CVLSLRFAACGKWFVSTGK---------DNLLNAWRT   88 (131)
Q Consensus        22 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~---------~~~i~~w~~   88 (131)
                      ..++|+|++++++ .+.++.+.+||+.+++...+..+..    .+.+++|||||++++.++.         ++.+++||+
T Consensus        19 ~~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~   97 (719)
T 1z68_A           19 FFPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL   97 (719)
T ss_dssp             CCCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred             CccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence            4789999996554 4568999999999988766554433    3889999999999988765         688999999


Q ss_pred             CCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         89 PYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+++..........+..++|||+|+.|+.+. ++.|.+||+
T Consensus        98 ~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~  137 (719)
T 1z68_A           98 SNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQR  137 (719)
T ss_dssp             TTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred             CCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence            9887731111235688899999999998875 679999986

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.61  E-value=8.1e-14  Score=85.53  Aligned_cols=113  Identities=12%  Similarity=0.036  Sum_probs=83.6

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---C--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---S--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   75 (131)
                      |.+||+.+++....    ..+..+.|+|||+.|+....+   +  .|.++++.+++...+..... +..+.|+|||+.|+
T Consensus        45 l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~  119 (347)
T 2gop_A           45 IVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLL  119 (347)
T ss_dssp             EEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEE
T ss_pred             EEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEE
Confidence            45778877765433    567889999999999877643   2  37788888877665555445 89999999999888


Q ss_pred             EeCCC---------------------------CeEEEeeCCCCce-EEecCCCCCeEEEEECCCCCEEEEecCC
Q psy15612         76 STGKD---------------------------NLLNAWRTPYGAS-IFQSKESSSVLSCDISADDKYIVTGSGD  121 (131)
Q Consensus        76 ~~~~~---------------------------~~i~~w~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d  121 (131)
                      .++.+                           ..+.+||+.+++. ..+.. . .+..++|+|+| +++++..+
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~  190 (347)
T 2gop_A          120 IVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR  190 (347)
T ss_dssp             EEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred             EEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence            77532                           4688999998887 43333 3 78899999999 77766554

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.61  E-value=4.1e-14  Score=93.48  Aligned_cols=128  Identities=13%  Similarity=0.051  Sum_probs=94.6

Q ss_pred             CEEEeCCC------Cceeeee-cCCCCeEEEEECCCCCEEEEEeCC--------CcEEEEeCC-CC---CeEEeec-ccc
Q psy15612          1 MYLQSVSP------GRQLQQH-DFSSQIFSLGYCPSGEWLAVGMEN--------SNVEVLHAL-KP---DKYQLHL-HES   60 (131)
Q Consensus         1 i~iwd~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~--------~~v~~~~~~-~~---~~~~~~~-~~~   60 (131)
                      |++||+.+      ++..... .+...+..++|+|||+.|+.++.+        ..|.+||+. ++   ....+.. +..
T Consensus       163 i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~  242 (662)
T 3azo_A          163 LAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE  242 (662)
T ss_dssp             EEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB
T ss_pred             EEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc
Confidence            46889887      6655555 556678889999999999887654        369999998 46   4444443 467


Q ss_pred             ceEEEEEccCCCEEEEeCCCC--eEEEeeCCCCceEEecCCCCC---------eEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         61 CVLSLRFAACGKWFVSTGKDN--LLNAWRTPYGASIFQSKESSS---------VLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        61 ~v~~~~~~~~~~~~~~~~~~~--~i~~w~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+..+.|+|||+.+++++.++  .+..||..+++...+..+...         +..++|+|+++++++++. +..++|.+
T Consensus       243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~  321 (662)
T 3azo_A          243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL  321 (662)
T ss_dssp             CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred             eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence            889999999999777777777  677777767766533322211         457889999999999888 99999954

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.58  E-value=1.1e-12  Score=78.64  Aligned_cols=127  Identities=12%  Similarity=0.147  Sum_probs=92.7

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc--ccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH--ESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~   75 (131)
                      |++||.. ++.+..+   .+...+..++++|+++.+++...++.|.+|+........+...  ...+..++++++|+.++
T Consensus       144 i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v  222 (286)
T 1q7f_A          144 VIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILI  222 (286)
T ss_dssp             EEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEE
T ss_pred             EEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEE
Confidence            4567743 5555555   2345689999999999777777788999999865544444332  35688999999999888


Q ss_pred             EeCCCC-eEEEeeCCCCceE-EecC--CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         76 STGKDN-LLNAWRTPYGASI-FQSK--ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~~-~i~~w~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +...++ .|.+|+.. ++.+ ....  ....+..++++|+|+++++ +.++.|++|++.
T Consensus       223 ~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~  279 (286)
T 1q7f_A          223 ADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV  279 (286)
T ss_dssp             EECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred             EeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence            887776 99999964 5544 2222  2345789999999987776 568999999863

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.57  E-value=2.2e-12  Score=77.32  Aligned_cols=127  Identities=9%  Similarity=0.129  Sum_probs=94.8

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++|| .+++.+..+  .....+..++++|+++.+++...++.|.+|+........+.  .+...+..++++|+|+.+++
T Consensus       102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~  180 (286)
T 1q7f_A          102 IQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFIS  180 (286)
T ss_dssp             EEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred             EEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence            46777 556666655  33457899999999998777777889999997654444443  34456889999999998777


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCC--CCCeEEEEECCCCCEEEEecCCC-cEEEEEe
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKE--SSSVLSCDISADDKYIVTGSGDK-KATVYEV  129 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~--~~~v~~~~~~~~~~~l~~~~~d~-~i~vw~~  129 (131)
                      ...++.|.+||.. ++.+ .....  ...+..++++++|+++++...++ .|.+||.
T Consensus       181 ~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~  236 (286)
T 1q7f_A          181 DNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ  236 (286)
T ss_dssp             EGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred             ECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence            7788999999975 5444 33222  36789999999999888887775 8999974

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.55  E-value=2.4e-12  Score=78.88  Aligned_cols=128  Identities=16%  Similarity=0.151  Sum_probs=96.5

Q ss_pred             CEEEeCCCCceeeeec--CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC--CeEEe---------eccccceEEEEE
Q psy15612          1 MYLQSVSPGRQLQQHD--FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKP--DKYQL---------HLHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~--~~~~~---------~~~~~~v~~~~~   67 (131)
                      |.+||..+++.+....  +...+..++++|+|+++++...++.|.+|+....  ....+         ..+...+..+++
T Consensus        71 i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~  150 (329)
T 3fvz_A           71 ILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAV  150 (329)
T ss_dssp             EEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEE
T ss_pred             EEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEE
Confidence            4678888888876663  3457899999999998888888899999998765  23333         233346889999


Q ss_pred             cc-CCCEEEEeC-CCCeEEEeeCCCCceEEecC-----------CCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612         68 AA-CGKWFVSTG-KDNLLNAWRTPYGASIFQSK-----------ESSSVLSCDISAD-DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        68 ~~-~~~~~~~~~-~~~~i~~w~~~~~~~~~~~~-----------~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~  129 (131)
                      +| ++..+++.+ .++.|++|+ .+++.+....           +-..+..++++|+ ++++++...++.|++||.
T Consensus       151 ~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~  225 (329)
T 3fvz_A          151 EPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKT  225 (329)
T ss_dssp             CTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             eCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEEC
Confidence            99 788887776 689999999 4566652221           1234889999998 777777778889999986

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.55  E-value=4.7e-13  Score=83.21  Aligned_cols=129  Identities=12%  Similarity=-0.040  Sum_probs=93.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-ccccceEEE--EEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-LHESCVLSL--RFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~--~~~~~~~~~~~   76 (131)
                      |.+||+.+++..... .+...+..+.|+|+++.|+.+..+..+.+||+.+++...+. .+...+...  .++|+++.++.
T Consensus        62 l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~  141 (388)
T 3pe7_A           62 YYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVG  141 (388)
T ss_dssp             EEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred             EEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeecc
Confidence            356788888877666 34444456789999999999998889999999988865443 333334333  34899998874


Q ss_pred             e----------------------CCCCeEEEeeCCCCceEEecCCCCCeEEEEECC-CCCEEEEecCC------CcEEEE
Q psy15612         77 T----------------------GKDNLLNAWRTPYGASIFQSKESSSVLSCDISA-DDKYIVTGSGD------KKATVY  127 (131)
Q Consensus        77 ~----------------------~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~vw  127 (131)
                      .                      ..+..|.+||+.+++...+..+...+..++|+| +|+.++....+      ..+.++
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~  221 (388)
T 3pe7_A          142 IEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLI  221 (388)
T ss_dssp             EEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEE
T ss_pred             ccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEE
Confidence            2                      234679999999988775556677889999999 99988766543      256665


Q ss_pred             Ee
Q psy15612        128 EV  129 (131)
Q Consensus       128 ~~  129 (131)
                      |+
T Consensus       222 d~  223 (388)
T 3pe7_A          222 NE  223 (388)
T ss_dssp             ET
T ss_pred             eC
Confidence            53

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.55  E-value=4.1e-13  Score=89.63  Aligned_cols=110  Identities=13%  Similarity=0.167  Sum_probs=82.1

Q ss_pred             CeEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCe------------
Q psy15612         20 QIFSLGYCPSGEWLAVGMENS-----NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNL------------   82 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------------   82 (131)
                      .+..++|||||+.|+.+..++     .|++||+.+++..........+..++|+|||+.|+.++.++.            
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~  205 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN  205 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence            578999999999998765433     799999999886443222223668999999999988776654            


Q ss_pred             ----EEEeeCCCCce---E-Eec-CCCCCeEEEEECCCCCEEEEecC-----CCcEEEEEe
Q psy15612         83 ----LNAWRTPYGAS---I-FQS-KESSSVLSCDISADDKYIVTGSG-----DKKATVYEV  129 (131)
Q Consensus        83 ----i~~w~~~~~~~---~-~~~-~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~vw~~  129 (131)
                          |++|++.+++.   + ... .+...+..+.|+|+|++++..+.     +..+.+||+
T Consensus       206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~  266 (710)
T 2xdw_A          206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDL  266 (710)
T ss_dssp             CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEG
T ss_pred             CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEEC
Confidence                99999988763   2 222 24556789999999999876653     457888886

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.55  E-value=2.8e-12  Score=83.83  Aligned_cols=93  Identities=13%  Similarity=0.037  Sum_probs=74.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC--CCCe-EEeeccccceEEEEEc----cCCCE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL--KPDK-YQLHLHESCVLSLRFA----ACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~--~~~~-~~~~~~~~~v~~~~~~----~~~~~   73 (131)
                      |.++|..+++.+..+.....+..+.++|||+++++++.++.|.+||+.  +.+. .++.. ......++|+    |||++
T Consensus       179 V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~  257 (567)
T 1qks_A          179 IALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKY  257 (567)
T ss_dssp             EEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTE
T ss_pred             EEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCE
Confidence            468999999999888666677899999999999999999999999995  5554 33433 3457899999    69998


Q ss_pred             EEEeCC-CCeEEEeeCCCCceE
Q psy15612         74 FVSTGK-DNLLNAWRTPYGASI   94 (131)
Q Consensus        74 ~~~~~~-~~~i~~w~~~~~~~~   94 (131)
                      +++++. ++.+.++|..+.+.+
T Consensus       258 l~v~n~~~~~v~ViD~~t~~~~  279 (567)
T 1qks_A          258 AIAGAYWPPQYVIMDGETLEPK  279 (567)
T ss_dssp             EEEEEEETTEEEEEETTTCCEE
T ss_pred             EEEEEccCCeEEEEECCCCcEE
Confidence            887655 588999998877665

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.54  E-value=4.4e-13  Score=83.36  Aligned_cols=127  Identities=9%  Similarity=-0.014  Sum_probs=90.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECC-CCCEEEEEeCC------CcEEEEeCCCCCeEEeecc--ccceEEEEEccCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCP-SGEWLAVGMEN------SNVEVLHALKPDKYQLHLH--ESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~   71 (131)
                      |++||+.+++......+...+..+.|+| +++.++....+      ..|.++++.+.....+..+  ...+..+.|+|||
T Consensus       170 l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg  249 (396)
T 3c5m_A          170 LIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG  249 (396)
T ss_dssp             EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTS
T ss_pred             EEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCC
Confidence            4688998888776666777899999999 78877765543      3688889877665554443  2357889999999


Q ss_pred             CEEEEeCCC-----CeEEEeeCCCCceEEecCCCCCeEEEEECC-CCCEEEEec----------------CCCcEEEEEe
Q psy15612         72 KWFVSTGKD-----NLLNAWRTPYGASIFQSKESSSVLSCDISA-DDKYIVTGS----------------GDKKATVYEV  129 (131)
Q Consensus        72 ~~~~~~~~~-----~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----------------~d~~i~vw~~  129 (131)
                      +.++..+.+     +.+++||+.+++......... .. +.|+| +|++++.++                .+..+.+||+
T Consensus       250 ~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~  327 (396)
T 3c5m_A          250 SAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT  327 (396)
T ss_dssp             SCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred             CEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence            987766433     349999998887653322222 23 88999 999887654                2467888885

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.51  E-value=1.1e-11  Score=75.70  Aligned_cols=129  Identities=7%  Similarity=0.072  Sum_probs=92.9

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCC----CcEEEEeCCCCCeEEe-e--ccccceEEEEEccCCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMEN----SNVEVLHALKPDKYQL-H--LHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~----~~v~~~~~~~~~~~~~-~--~~~~~v~~~~~~~~~~   72 (131)
                      |++||.++++..... .+...+..++++|+++++++...+    +.|.+||..+.....+ .  .....+.++.++|+|+
T Consensus        68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~  147 (333)
T 2dg1_A           68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG  147 (333)
T ss_dssp             EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred             EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC
Confidence            467888877766544 566789999999999987777665    5799999988775432 2  2345688999999999


Q ss_pred             EEEEeCC------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         73 WFVSTGK------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        73 ~~~~~~~------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      .+++...      .+.+..++..+++..........+..++|+|+++.++ +.+.++.|.+||+
T Consensus       148 l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~  211 (333)
T 2dg1_A          148 FYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIAL  211 (333)
T ss_dssp             EEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred             EEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEe
Confidence            8776654      3567777776655543323334578899999998654 4455788999987

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.51  E-value=2e-12  Score=80.25  Aligned_cols=127  Identities=14%  Similarity=0.067  Sum_probs=89.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCCe-EEeecc------ccceE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME----------NSNVEVLHALKPDK-YQLHLH------ESCVL   63 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------~~~v~~~~~~~~~~-~~~~~~------~~~v~   63 (131)
                      |++||..+++.+..+...... .++++|++++++++..          ++.|.+||..+.+. ..+...      ...+.
T Consensus        33 v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~  111 (361)
T 2oiz_A           33 VHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDG  111 (361)
T ss_dssp             EEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGG
T ss_pred             EEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcc
Confidence            468999999888777433334 8999999999988762          56799999988775 333321      23567


Q ss_pred             EEEEccCCCEEEEeCC--CCeEEEeeCCCCceEEe-cCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEe
Q psy15612         64 SLRFAACGKWFVSTGK--DNLLNAWRTPYGASIFQ-SKESSSVLSCDISADD-KYIVTGSGDKKATVYEV  129 (131)
Q Consensus        64 ~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~  129 (131)
                      .++++|||++++++..  ++.+.+||+.+++.+.. ....+. ..+.+.|++ +.+++.+.|+++.++++
T Consensus       112 ~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~  180 (361)
T 2oiz_A          112 LFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINL  180 (361)
T ss_dssp             GEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred             eEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence            8999999999988764  57899999999877744 433322 224455654 45556666677666654

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.51  E-value=1.7e-12  Score=80.68  Aligned_cols=114  Identities=13%  Similarity=-0.018  Sum_probs=83.3

Q ss_pred             EeCCCCceeeee-cCCCCeEE-----EEECCCCCEEEEEeC-CC--cEEEEeCCCCCeEEeec-cccceEEEEEccCCCE
Q psy15612          4 QSVSPGRQLQQH-DFSSQIFS-----LGYCPSGEWLAVGME-NS--NVEVLHALKPDKYQLHL-HESCVLSLRFAACGKW   73 (131)
Q Consensus         4 wd~~~~~~~~~~-~~~~~v~~-----~~~~~~~~~l~~~~~-~~--~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~   73 (131)
                      .|..++..+..+ .+......     .+|+|||+.|+..+. ++  .+.+||+.+++...+.. +...+....|+|||+.
T Consensus        15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~   94 (388)
T 3pe7_A           15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA   94 (388)
T ss_dssp             ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred             ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence            356677777666 55555555     789999999988877 56  38888998888765543 3334446789999999


Q ss_pred             EEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEE--ECCCCCEEEE
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCD--ISADDKYIVT  117 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~--~~~~~~~l~~  117 (131)
                      |+.++.++.+++||+.+++.. ....+...+....  ++|++++++.
T Consensus        95 l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~  141 (388)
T 3pe7_A           95 LFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVG  141 (388)
T ss_dssp             EEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred             EEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeecc
Confidence            999998899999999998876 3333444443333  4899998864

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.49  E-value=3e-12  Score=79.65  Aligned_cols=127  Identities=13%  Similarity=0.096  Sum_probs=85.6

Q ss_pred             CEEEeCCCCceeeeecC--CCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCCeEEeeccccceEEEEEcc-CCC
Q psy15612          1 MYLQSVSPGRQLQQHDF--SSQIFSLGYCPSGEWLAVGMEN-----SNVEVLHALKPDKYQLHLHESCVLSLRFAA-CGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~   72 (131)
                      |.+||+.+++......+  ...+..+.|+|+|+.|+..+.+     +.|.+||+.+++...+..... .. +.|+| ||+
T Consensus       218 l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~  295 (396)
T 3c5m_A          218 MWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGS  295 (396)
T ss_dssp             CEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSS
T ss_pred             EEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCc
Confidence            45677765554433332  2357889999999987776443     349999998887654443332 22 88999 999


Q ss_pred             EEEEeC----------------CCCeEEEeeCCCCceEEecCCCC-----------CeEEEEECCCCCEEEEecC-CCcE
Q psy15612         73 WFVSTG----------------KDNLLNAWRTPYGASIFQSKESS-----------SVLSCDISADDKYIVTGSG-DKKA  124 (131)
Q Consensus        73 ~~~~~~----------------~~~~i~~w~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~~~-d~~i  124 (131)
                      .++.++                .+..+++||..+++...+..+..           .+..++|+|+|+.++..+. ++..
T Consensus       296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~  375 (396)
T 3c5m_A          296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVP  375 (396)
T ss_dssp             EEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSC
T ss_pred             eEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCc
Confidence            887643                34679999998877554333333           2567889999998876654 5666


Q ss_pred             EEEEe
Q psy15612        125 TVYEV  129 (131)
Q Consensus       125 ~vw~~  129 (131)
                      .+|.+
T Consensus       376 ~l~~~  380 (396)
T 3c5m_A          376 AIYIA  380 (396)
T ss_dssp             EEEEE
T ss_pred             eEEEE
Confidence            66654

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.49  E-value=2.5e-11  Score=73.19  Aligned_cols=126  Identities=11%  Similarity=0.032  Sum_probs=91.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~   74 (131)
                      |+.||..++  ...+ .+...+..++++|+|+++++...++.|.+||..+++...+..     ....+..++++|+|+.+
T Consensus        52 i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~  129 (296)
T 3e5z_A           52 TWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLW  129 (296)
T ss_dssp             EEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEE
T ss_pred             EEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEE
Confidence            457787766  3344 566779999999999988777667889999997777544321     12345679999999988


Q ss_pred             EEe----C-------------CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         75 VST----G-------------KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        75 ~~~----~-------------~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++.    +             ..+.+..++.. ++..........+..++|+|+++.+++.+.++.|.+|++
T Consensus       130 vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~  200 (296)
T 3e5z_A          130 FSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCL  200 (296)
T ss_dssp             EEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEE
T ss_pred             EECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEE
Confidence            763    2             13456666665 555444556677889999999998877777889999987

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.49  E-value=5.4e-13  Score=88.92  Aligned_cols=104  Identities=12%  Similarity=0.065  Sum_probs=75.8

Q ss_pred             CCeEEEEECCCCCEEEEE-----eCCCcEEEEeCCCCCeE-EeeccccceEEEEEccCCCEEEEeCCCCe----------
Q psy15612         19 SQIFSLGYCPSGEWLAVG-----MENSNVEVLHALKPDKY-QLHLHESCVLSLRFAACGKWFVSTGKDNL----------   82 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~-----~~~~~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----------   82 (131)
                      ..+..++|||||+.|+..     +.+..|++||+.+++.. ...........++|+|||+.|+.++.+..          
T Consensus       121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~  200 (695)
T 2bkl_A          121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG  200 (695)
T ss_dssp             EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred             EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence            358899999999998843     33468999999988754 11111111268999999999998877665          


Q ss_pred             ---EEEeeCCCCce---E-Ee-cCCCCCeEEEEECCCCCEEEEecCCC
Q psy15612         83 ---LNAWRTPYGAS---I-FQ-SKESSSVLSCDISADDKYIVTGSGDK  122 (131)
Q Consensus        83 ---i~~w~~~~~~~---~-~~-~~~~~~v~~~~~~~~~~~l~~~~~d~  122 (131)
                         |++|++.+++.   + .. ..+...+..+.|+|+|++++..+.++
T Consensus       201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~  248 (695)
T 2bkl_A          201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG  248 (695)
T ss_dssp             GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred             CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence               99999988762   2 22 23446788999999999988766544

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.48  E-value=5.5e-12  Score=77.29  Aligned_cols=128  Identities=13%  Similarity=0.087  Sum_probs=93.5

Q ss_pred             CEEEeCCCCceeeeecC-----------CCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEe--eccccceEEE
Q psy15612          1 MYLQSVSPGRQLQQHDF-----------SSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQL--HLHESCVLSL   65 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~-----------~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~v~~~   65 (131)
                      |++|| .+++.+..+..           ...+..++++|+ +.++++...++.|.+|+..+++. ..+  ..+...+..+
T Consensus       168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~  246 (329)
T 3fvz_A          168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI  246 (329)
T ss_dssp             EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred             EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee
Confidence            45677 45666665521           123889999998 66667777788999999986664 333  2345678899


Q ss_pred             EEccCCCEEEEe-------CCCCeEEEeeCCCCceEEe----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         66 RFAACGKWFVST-------GKDNLLNAWRTPYGASIFQ----SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        66 ~~~~~~~~~~~~-------~~~~~i~~w~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++| +..+...       ..+..+.+|+..+++.+..    ..+...+..++++|+|+++++...++.|++|++.
T Consensus       247 ~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~  321 (329)
T 3fvz_A          247 SYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT  321 (329)
T ss_dssp             EEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred             eecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence            9999 4433333       3345899999999988733    2456778999999999888888889999999874

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.47  E-value=4.8e-12  Score=77.59  Aligned_cols=127  Identities=6%  Similarity=-0.049  Sum_probs=94.1

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC----------CcEEEEeCCCCCeE-Eeecc-ccceEEEEEc
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN----------SNVEVLHALKPDKY-QLHLH-ESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~v~~~~~~~~~~~-~~~~~-~~~v~~~~~~   68 (131)
                      |.++|.++++.+..+........+.++|+|++++++..+          +.|.++|..+.++. .+... ...+..++++
T Consensus       154 v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~  233 (328)
T 3dsm_A          154 ILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN  233 (328)
T ss_dssp             EEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC
T ss_pred             EEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe
Confidence            468899999888777555567789999999877766544          68999999888764 33322 2368899999


Q ss_pred             cCCCEEEEeCCCCeEEEeeCCCCceE--EecC-CCCCeEEEEECC-CCCEEEEe----cCCCcEEEEEe
Q psy15612         69 ACGKWFVSTGKDNLLNAWRTPYGASI--FQSK-ESSSVLSCDISA-DDKYIVTG----SGDKKATVYEV  129 (131)
Q Consensus        69 ~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~-~~~~v~~~~~~~-~~~~l~~~----~~d~~i~vw~~  129 (131)
                      |+++.++.+..  .+.+||..+++..  .... ....+..++++| +++++++.    ..++.|.+||.
T Consensus       234 ~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~  300 (328)
T 3dsm_A          234 GTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP  300 (328)
T ss_dssp             TTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred             cCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence            99999888765  8999999887764  1111 246789999999 55555665    56788999875

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.46  E-value=6.8e-12  Score=78.44  Aligned_cols=104  Identities=13%  Similarity=0.114  Sum_probs=83.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      .+.. |..++|  ++..|+++ .++.|++||+.+... .....+...+.++.+.+.  .++.++.||.+.+||+.+++..
T Consensus        86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~  159 (388)
T 1xip_A           86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK  159 (388)
T ss_dssp             ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE
T ss_pred             eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc
Confidence            5666 999999  89999988 778999999976653 445566777888777654  3888889999999999987765


Q ss_pred             EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .   ....|.+++|+|+|  ++.+..||++++|+..
T Consensus       160 ~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~  190 (388)
T 1xip_A          160 Q---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWR  190 (388)
T ss_dssp             E---EEESEEEEEECSSE--EEEEETTSCEEEEEEE
T ss_pred             c---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCC
Confidence            3   34689999999999  6778889999999763

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.45  E-value=5.4e-12  Score=84.33  Aligned_cols=128  Identities=5%  Similarity=-0.010  Sum_probs=88.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCc----------------EEEEeCCCCCe---EEeec--cc
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSN----------------VEVLHALKPDK---YQLHL--HE   59 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~----------------v~~~~~~~~~~---~~~~~--~~   59 (131)
                      |++||+.+++..........+..++|+|||+.|+.+..+..                |.+|++.++..   .....  +.
T Consensus       153 i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~  232 (710)
T 2xdw_A          153 IKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP  232 (710)
T ss_dssp             EEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred             EEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCC
Confidence            57899999987764422223677999999999998877665                99999987652   22222  34


Q ss_pred             cceEEEEEccCCCEEEEeCC-----CCeEEEeeCCC------Cc--eEEecCCCCCeEEEEECCCCCEEEEecCC----C
Q psy15612         60 SCVLSLRFAACGKWFVSTGK-----DNLLNAWRTPY------GA--SIFQSKESSSVLSCDISADDKYIVTGSGD----K  122 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~-----~~~i~~w~~~~------~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~  122 (131)
                      ..+..+.|+|||++++..+.     +..+++||+.+      +.  ...+..+...+.. .|+|+|+.++..+..    .
T Consensus       233 ~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~  311 (710)
T 2xdw_A          233 KWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNY  311 (710)
T ss_dssp             TCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTC
T ss_pred             eEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCC
Confidence            55788999999999887654     56899999876      42  3344444444443 488888877655442    3


Q ss_pred             cEEEEEe
Q psy15612        123 KATVYEV  129 (131)
Q Consensus       123 ~i~vw~~  129 (131)
                      .|.+||+
T Consensus       312 ~l~~~d~  318 (710)
T 2xdw_A          312 RLINIDF  318 (710)
T ss_dssp             EEEEEET
T ss_pred             EEEEEeC
Confidence            5777775

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.45  E-value=1.3e-11  Score=75.67  Aligned_cols=128  Identities=5%  Similarity=-0.053  Sum_probs=92.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeeccc-----cceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHE-----SCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~-----~~v~~~~~~~~~~~~   74 (131)
                      |.++|.++++.+..+.....+..++++|+++.+++...++.|.++|..+.+.. .+....     ..+..+++ .+++.+
T Consensus        66 v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~ly  144 (328)
T 3dsm_A           66 IFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVY  144 (328)
T ss_dssp             EEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEE
T ss_pred             EEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEE
Confidence            46899999999888866677899999998854444447899999999988764 333222     14566777 344444


Q ss_pred             EEeC-CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC----------CcEEEEEe
Q psy15612         75 VSTG-KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD----------KKATVYEV  129 (131)
Q Consensus        75 ~~~~-~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~vw~~  129 (131)
                      ++.. .++.|.++|..+++..........+..+.++|+|+++++...+          +.|.++|.
T Consensus       145 v~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~  210 (328)
T 3dsm_A          145 VNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDA  210 (328)
T ss_dssp             EEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred             EEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEEC
Confidence            4443 4889999999998877433344556789999999977776554          67888885

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.43  E-value=5.2e-12  Score=77.50  Aligned_cols=112  Identities=10%  Similarity=0.024  Sum_probs=77.3

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC---------------------------CcEEEEeCCCCCe-
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN---------------------------SNVEVLHALKPDK-   52 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---------------------------~~v~~~~~~~~~~-   52 (131)
                      |.+||+.+++......... +..+.|+|+|+.|+.++.+                           ..+.+|++.+++. 
T Consensus        87 l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~  165 (347)
T 2gop_A           87 IWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI  165 (347)
T ss_dssp             EEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred             EEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence            3567888887766654445 9999999999998887632                           4688899988876 


Q ss_pred             EEeeccccceEEEEEccCCCEEEEeCCC---------CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC
Q psy15612         53 YQLHLHESCVLSLRFAACGKWFVSTGKD---------NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD  121 (131)
Q Consensus        53 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~---------~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  121 (131)
                      ..+.. . .+..+.|+||| .++++..+         ..+.++|  +++...+..+ ..+..+  +|+|++++.++.+
T Consensus       166 ~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~  235 (347)
T 2gop_A          166 EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYAV--DSDGERILLYGKP  235 (347)
T ss_dssp             EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEEE--EECSSCEEEEECC
T ss_pred             eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC-cceeeE--CCCCCEEEEEEcc
Confidence            55554 4 78899999999 66666443         1355555  5555433333 444444  9999988776643

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.42  E-value=1.4e-10  Score=70.90  Aligned_cols=105  Identities=10%  Similarity=0.060  Sum_probs=82.4

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCC----CeEEEeeCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKD----NLLNAWRTPY   90 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~----~~i~~w~~~~   90 (131)
                      .+...+..++|+|++++++++..++.|.+||..+++...+. .+...+.+++++|+|+.+++...+    +.|.+||..+
T Consensus        42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~  121 (333)
T 2dg1_A           42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG  121 (333)
T ss_dssp             SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred             ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence            45567889999999997778888889999999888765543 456779999999999988777666    6899999987


Q ss_pred             CceE-Eec--CCCCCeEEEEECCCCCEEEEecC
Q psy15612         91 GASI-FQS--KESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        91 ~~~~-~~~--~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      ++.. ...  .....+..++++|+|+++++...
T Consensus       122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~  154 (333)
T 2dg1_A          122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR  154 (333)
T ss_dssp             CSCEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred             CEEEEEEccCccCCcccceEECCCCCEEEEecc
Confidence            7655 222  24567899999999998776653

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.41  E-value=2.3e-11  Score=81.70  Aligned_cols=110  Identities=13%  Similarity=0.090  Sum_probs=78.7

Q ss_pred             CeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCC-------------
Q psy15612         20 QIFSLGYCPSGEWLAVGMEN-----SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDN-------------   81 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-------------   81 (131)
                      .+..+.|||||+.|+.+..+     ..|++||+.+++......+...+..++|+|| +.|+.++.+.             
T Consensus       164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~  242 (741)
T 1yr2_A          164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN  242 (741)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred             EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence            57889999999999876543     3599999999886443222223357899999 9888776544             


Q ss_pred             -eEEEeeCCCCce---EEec--CCCCCeEEEEECCCCCEEEEecCC-----CcEEEEEee
Q psy15612         82 -LLNAWRTPYGAS---IFQS--KESSSVLSCDISADDKYIVTGSGD-----KKATVYEVI  130 (131)
Q Consensus        82 -~i~~w~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~~  130 (131)
                       .|++|++.++..   +...  .+...+..+.|+|+|++++..+.+     ..+.+||+.
T Consensus       243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~  302 (741)
T 1yr2_A          243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT  302 (741)
T ss_dssp             CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE
T ss_pred             CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC
Confidence             388999887652   2222  223458899999999988766543     378888863

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.39  E-value=6.4e-11  Score=70.29  Aligned_cols=112  Identities=13%  Similarity=0.146  Sum_probs=86.0

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS   97 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~   97 (131)
                      ..+..++++|+++.+++...++.|.+|+..+...... ......+..++++++|..+++...++.|.+|+..........
T Consensus       150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~  229 (270)
T 1rwi_B          150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP  229 (270)
T ss_dssp             CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC
T ss_pred             CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec
Confidence            4578899999998777766678899999887665332 223356889999999987777777889999998765444322


Q ss_pred             -CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         98 -KESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        98 -~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                       .....+..++++++|+++++...++.|.++++.
T Consensus       230 ~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~  263 (270)
T 1rwi_B          230 FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL  263 (270)
T ss_dssp             CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred             cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence             233678999999999988888889999999864

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.39  E-value=3.2e-11  Score=75.42  Aligned_cols=110  Identities=15%  Similarity=0.157  Sum_probs=85.3

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++||+.+....... .+...+.++.+.+..  ++++..||.+.+||+..+....   +...|.+++|||+|  ++.+..
T Consensus       108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~  180 (388)
T 1xip_A          108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLK  180 (388)
T ss_dssp             EEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEET
T ss_pred             EEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEc
Confidence            579998876544433 566778888776543  8888999999999998777543   34579999999999  567888


Q ss_pred             CCeEEEeeCCCCce--E-Ee------c---CCCCCeEEEEECCCCCEEEE
Q psy15612         80 DNLLNAWRTPYGAS--I-FQ------S---KESSSVLSCDISADDKYIVT  117 (131)
Q Consensus        80 ~~~i~~w~~~~~~~--~-~~------~---~~~~~v~~~~~~~~~~~l~~  117 (131)
                      |+.+++|+...++.  . ..      .   ++...|.++.|.+++.++++
T Consensus       181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            99999998887664  2 12      2   36788999999999998876

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.39  E-value=5.4e-11  Score=71.45  Aligned_cols=125  Identities=8%  Similarity=0.052  Sum_probs=93.0

Q ss_pred             CEEEeCCCCceeeeecCC--CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeecc-ccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFS--SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLH-ESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~-~~~v~~~~~~~~~~~~~~   76 (131)
                      |++||.++|+.+..+...  ..+.++.++|+|+.++  +.++.|..+|. +++. -++... ...+.++.+.|+|+.+++
T Consensus        17 v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~   93 (276)
T 3no2_A           17 IAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVA   93 (276)
T ss_dssp             EEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEE
T ss_pred             EEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEE
Confidence            578999899999888433  4688999999999888  34677999999 5553 444433 346888999999999988


Q ss_pred             eCC-CCeEEEeeCCCCceE--Eec-----CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         77 TGK-DNLLNAWRTPYGASI--FQS-----KESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        77 ~~~-~~~i~~w~~~~~~~~--~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .+. ++.+..+|. +|+.+  ...     .+......++..++|+++++...++.|..||.
T Consensus        94 ~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~  153 (276)
T 3no2_A           94 WCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP  153 (276)
T ss_dssp             EESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred             ecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence            776 777888886 57765  111     11123455678899999999888899988874

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.36  E-value=1.3e-10  Score=69.83  Aligned_cols=127  Identities=11%  Similarity=0.053  Sum_probs=93.9

Q ss_pred             CEEEeCCCCceeeeecC--CCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCeEEee------ccccceEEEEEccCC
Q psy15612          1 MYLQSVSPGRQLQQHDF--SSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKPDKYQLH------LHESCVLSLRFAACG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~   71 (131)
                      |+.||. +++.+..+..  ...+.++.+.|+|+.+++.+. ++.+..++.....+.++.      .+...+..+...++|
T Consensus        58 V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G  136 (276)
T 3no2_A           58 AKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKG  136 (276)
T ss_dssp             EEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTS
T ss_pred             EEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCC
Confidence            467787 7888887743  346888999999999998877 777777776444333322      122345567788999


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +++++...++.+..||.. |+.+........+..+...++++.+++++.++.|..+|.
T Consensus       137 ~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~  193 (276)
T 3no2_A          137 NYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNL  193 (276)
T ss_dssp             CEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred             CEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence            999999999999999988 888844333455667888899999988887777877764

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.36  E-value=2.3e-11  Score=81.14  Aligned_cols=128  Identities=8%  Similarity=-0.034  Sum_probs=86.3

Q ss_pred             CEEEeCCCCcee-eeecCCCCeEEEEECCCCCEEEEEeCCCc-------------EEEEeCCCCCe---EEe--eccccc
Q psy15612          1 MYLQSVSPGRQL-QQHDFSSQIFSLGYCPSGEWLAVGMENSN-------------VEVLHALKPDK---YQL--HLHESC   61 (131)
Q Consensus         1 i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-------------v~~~~~~~~~~---~~~--~~~~~~   61 (131)
                      |++||+++++.+ ...-.......++|+|||+.|+.++.+..             |.+|++.++..   ...  ..+...
T Consensus       149 i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~  228 (695)
T 2bkl_A          149 LHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT  228 (695)
T ss_dssp             EEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC
T ss_pred             EEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEE
Confidence            579999998865 22111111267999999999999887665             99999987762   112  234457


Q ss_pred             eEEEEEccCCCEEEEeCCCC----eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEec---CCCcEEEEEe
Q psy15612         62 VLSLRFAACGKWFVSTGKDN----LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGS---GDKKATVYEV  129 (131)
Q Consensus        62 v~~~~~~~~~~~~~~~~~~~----~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~vw~~  129 (131)
                      +..+.|+|||++++..+.++    .+++++..+++...+..+...+....+ ++|.+++.+.   .++.|.+||+
T Consensus       229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~  302 (695)
T 2bkl_A          229 FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDP  302 (695)
T ss_dssp             EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBT
T ss_pred             EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeC
Confidence            88999999999988776555    677777766665544445555556666 5556444444   2467888875

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.36  E-value=3.4e-10  Score=70.71  Aligned_cols=124  Identities=10%  Similarity=-0.051  Sum_probs=84.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCe-EEeecc-------ccce
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDK-YQLHLH-------ESCV   62 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~-~~~~~~-------~~~v   62 (131)
                      |.++|..+++.+..+...... .++++|||+.++.+.          .++.+.++|..+.+. ..+...       ....
T Consensus        49 v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p  127 (373)
T 2mad_H           49 QWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS  127 (373)
T ss_pred             EEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc
Confidence            468899999988777444444 999999999998875          356799999987764 333211       1245


Q ss_pred             EEEEEccCCCEEEEeCC--CCeEEEeeCCCCceEEe-cCCCCCeEEEEECCCC-CEEEEecCCCcEEEEEe
Q psy15612         63 LSLRFAACGKWFVSTGK--DNLLNAWRTPYGASIFQ-SKESSSVLSCDISADD-KYIVTGSGDKKATVYEV  129 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~vw~~  129 (131)
                      ..+.|+|||++++.++.  ++.|.++| .+++.... ...+..   +.+.|++ +.+++.+.|+++.++|.
T Consensus       128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~  194 (373)
T 2mad_H          128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH  194 (373)
T ss_pred             cceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC
Confidence            68999999999998764  47899999 98887744 443332   3334443 33445556666666553

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.31  E-value=5.4e-10  Score=66.31  Aligned_cols=129  Identities=11%  Similarity=0.015  Sum_probs=91.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |.+||.......... .....+..++++|+|+.+++...++.|.+++..+...... ......+..++++++|+.+++..
T Consensus        89 i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~  168 (270)
T 1rwi_B           89 VVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDT  168 (270)
T ss_dssp             EEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEG
T ss_pred             EEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEEC
Confidence            356676544332222 2335789999999998777766778899997665543222 22234578899999999777777


Q ss_pred             CCCeEEEeeCCCCceEEe-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASIFQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .++.|.+|+......... ......+..++++++|+++++...++.|.+||.
T Consensus       169 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~  220 (270)
T 1rwi_B          169 DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA  220 (270)
T ss_dssp             GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred             CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence            788999999887665432 233367889999999987777777888998874

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.31  E-value=1.4e-10  Score=72.53  Aligned_cols=93  Identities=13%  Similarity=0.011  Sum_probs=71.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCe-EEeecc-------ccce
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDK-YQLHLH-------ESCV   62 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~-~~~~~~-------~~~v   62 (131)
                      |.+.|..+++.+..+....... +.++|||+.++.+.          .++.|.+||..+.+. ..+...       ....
T Consensus        61 V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P  139 (386)
T 3sjl_D           61 QFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP  139 (386)
T ss_dssp             EEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred             EEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCC
Confidence            4578999999888874333334 99999999887765          356799999999885 333221       1246


Q ss_pred             EEEEEccCCCEEEEeCC--CCeEEEeeCCCCceE
Q psy15612         63 LSLRFAACGKWFVSTGK--DNLLNAWRTPYGASI   94 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~   94 (131)
                      ..+.++|||++++.+..  ++.+.++|+.+++..
T Consensus       140 ~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv  173 (386)
T 3sjl_D          140 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK  173 (386)
T ss_dssp             GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred             ceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE
Confidence            68999999999888754  688999999999887

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.30  E-value=7.6e-10  Score=66.69  Aligned_cols=116  Identities=11%  Similarity=0.131  Sum_probs=80.7

Q ss_pred             EEeCCC-CceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-CCCe----EEeeccccceEEEEEccCCCEEEE
Q psy15612          3 LQSVSP-GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHAL-KPDK----YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         3 iwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~-~~~~----~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      +|.+.. ++..........+..++|+|+++.+++...++.|.+|++. .+..    ..+..+...+..++++++|+.+++
T Consensus       155 l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~  234 (296)
T 3e5z_A          155 VFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWAS  234 (296)
T ss_dssp             EEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEE
T ss_pred             EEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEE
Confidence            444332 3333333555678899999999988666777899999986 4443    122223455678999999997666


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEE-CCCCCEEEEecCCC
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDI-SADDKYIVTGSGDK  122 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~-~~~~~~l~~~~~d~  122 (131)
                      .  ++.|.+|+.. ++.. ....+.. +.+++| +|+++.|++++.++
T Consensus       235 ~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~  278 (296)
T 3e5z_A          235 A--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE  278 (296)
T ss_dssp             E--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred             c--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence            6  7889999987 6655 3333444 889999 68988888777664

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.30  E-value=2.1e-10  Score=75.14  Aligned_cols=102  Identities=15%  Similarity=0.157  Sum_probs=79.4

Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCC--CCceEEecCCCCCeEE
Q psy15612         28 PSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTP--YGASIFQSKESSSVLS  105 (131)
Q Consensus        28 ~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~--~~~~~~~~~~~~~v~~  105 (131)
                      |.+..+++...++.|.++|..+++..........+..+.|+|||+++++++.++.+.+||+.  +++.......+.....
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~  244 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS  244 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce
Confidence            44456667777899999999998864333334456799999999999999999999999995  6766644444566789


Q ss_pred             EEEC----CCCCEEEEecC-CCcEEEEEe
Q psy15612        106 CDIS----ADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus       106 ~~~~----~~~~~l~~~~~-d~~i~vw~~  129 (131)
                      ++|+    |+|+++++++. ++++.++|.
T Consensus       245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~  273 (567)
T 1qks_A          245 IETSKMEGWEDKYAIAGAYWPPQYVIMDG  273 (567)
T ss_dssp             EEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred             eEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence            9999    69999887765 588999884

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.28  E-value=1.7e-10  Score=71.65  Aligned_cols=87  Identities=9%  Similarity=0.115  Sum_probs=71.2

Q ss_pred             EEECCCCCEEEEEeC-----------CCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612         24 LGYCPSGEWLAVGME-----------NSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        24 ~~~~~~~~~l~~~~~-----------~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      ++++|+++.++.+..           ...|.+||+.+.+. ..+..+.  +..++|+|||+++++++. +.+.+||..++
T Consensus       259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~  335 (361)
T 2oiz_A          259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP  335 (361)
T ss_dssp             EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred             EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence            688999888776543           34799999998886 4455555  899999999999998887 99999999999


Q ss_pred             --ceEEe-cCCCCCeEEEEECCCCC
Q psy15612         92 --ASIFQ-SKESSSVLSCDISADDK  113 (131)
Q Consensus        92 --~~~~~-~~~~~~v~~~~~~~~~~  113 (131)
                        +.+.. ...+.....++++|+|+
T Consensus       336 ~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          336 EPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             cceeeEEeccCCCCcEEEEecCCCC
Confidence              77744 56788889999999986

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.27  E-value=2e-10  Score=77.18  Aligned_cols=127  Identities=14%  Similarity=0.096  Sum_probs=84.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCc--------------EEEEeCCCCCe---EEeec--cccc
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSN--------------VEVLHALKPDK---YQLHL--HESC   61 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--------------v~~~~~~~~~~---~~~~~--~~~~   61 (131)
                      |++||+++++.+........+..++|+|| +.|+.+..+..              |.+|++.++..   .....  +...
T Consensus       191 i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~  269 (741)
T 1yr2_A          191 VKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR  269 (741)
T ss_dssp             EEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred             EEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence            57899999887654322222357899999 98888776543              88899876652   22222  2235


Q ss_pred             eEEEEEccCCCEEEEeCCC-----CeEEEeeCCCC--c-eEEecCCCCCeEEEEECCCCCEEEEecC----CCcEEEEEe
Q psy15612         62 VLSLRFAACGKWFVSTGKD-----NLLNAWRTPYG--A-SIFQSKESSSVLSCDISADDKYIVTGSG----DKKATVYEV  129 (131)
Q Consensus        62 v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~--~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~vw~~  129 (131)
                      +..+.|+|||++++..+.+     ..+++||+.++  + ...+..+....... ++|+|+.++..+.    ++.|.+||+
T Consensus       270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~  348 (741)
T 1yr2_A          270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDL  348 (741)
T ss_dssp             EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEEC
T ss_pred             EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence            7899999999988876543     47999999877  4 44443444444444 3488888776654    345888875

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.24  E-value=1.8e-09  Score=65.31  Aligned_cols=121  Identities=10%  Similarity=-0.016  Sum_probs=83.9

Q ss_pred             CceeeeecCCCCeEEEEEC----CCCCEEEEE-eCCCcEEEEeCC-CCCe------EEeeccc-cceEEEEEccCCCEEE
Q psy15612          9 GRQLQQHDFSSQIFSLGYC----PSGEWLAVG-MENSNVEVLHAL-KPDK------YQLHLHE-SCVLSLRFAACGKWFV   75 (131)
Q Consensus         9 ~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~~~~v~~~~~~-~~~~------~~~~~~~-~~v~~~~~~~~~~~~~   75 (131)
                      ++.............++++    |+++.++.+ ..++.|.+|+.. .+..      ..+..+. ..+..++++++|+.++
T Consensus       162 g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v  241 (314)
T 1pjx_A          162 GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLV  241 (314)
T ss_dssp             SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEE
T ss_pred             CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEE
Confidence            4333333333456788999    999766555 457889999976 3332      1122222 5678899999999888


Q ss_pred             EeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEE-EEecCCCcEEEEEe
Q psy15612         76 STGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYI-VTGSGDKKATVYEV  129 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~  129 (131)
                      +...++.|..||..+++.. ....+...+.+++++|+++.+ ++...++.|..+++
T Consensus       242 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~  297 (314)
T 1pjx_A          242 ANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             EEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             EEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence            7777889999999866655 333445788999999999955 45555678888875

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.23  E-value=6.3e-09  Score=62.90  Aligned_cols=125  Identities=13%  Similarity=0.081  Sum_probs=82.4

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~   75 (131)
                      |+.||..+++. ..+.....+..++++|+|+++++ . +..|.+||..+++...+..     ....+.+++++|+|+.++
T Consensus        37 i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~  113 (297)
T 3g4e_A           37 VCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFA  113 (297)
T ss_dssp             EEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEE
T ss_pred             EEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEE
Confidence            35677766554 33445678999999999995554 3 4579999998877544322     124578899999999766


Q ss_pred             EeCC-----------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         76 STGK-----------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        76 ~~~~-----------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      +...           .+.+..++.. ++.............++|+|+++.++ +.+.++.|.+|++
T Consensus       114 ~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~  178 (297)
T 3g4e_A          114 GTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDY  178 (297)
T ss_dssp             EEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred             ecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence            5422           2344444543 44333333345568899999998764 4555778988875

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.22  E-value=2e-08  Score=60.17  Aligned_cols=125  Identities=10%  Similarity=-0.017  Sum_probs=89.7

Q ss_pred             EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccCCCEEEEe
Q psy15612          2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      ..||. +++.....  .....+..+++++++...++...++.+..++. +++...+  ......+..+++.++|+..++.
T Consensus       123 ~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~  200 (299)
T 2z2n_A          123 GRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVE  200 (299)
T ss_dssp             EEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred             EEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEc
Confidence            45565 44433222  23456899999999988777766788999998 6665433  2334568899999999987777


Q ss_pred             CCCCeEEEeeCCCCceE-E-ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASI-F-QSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ..++.+..|+. +++.. . .......+..++++++|++.++...++.|..||.
T Consensus       201 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~  253 (299)
T 2z2n_A          201 IIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS  253 (299)
T ss_dssp             TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred             cCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence            77889999999 67655 2 2234567899999999997776656778888874

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.21  E-value=1.2e-08  Score=63.84  Aligned_cols=66  Identities=11%  Similarity=0.062  Sum_probs=48.5

Q ss_pred             EEEccCCCEEEEeCC----------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCC-EEEEec-CCCcEEEEEee
Q psy15612         65 LRFAACGKWFVSTGK----------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDK-YIVTGS-GDKKATVYEVI  130 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~----------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~vw~~~  130 (131)
                      +.++|+++.++....          .+.|.++|..+++.+.....+....+++|+|+|+ .++++. .++.|.++|+.
T Consensus       272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~  349 (373)
T 2mad_H          272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG  349 (373)
T ss_pred             EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence            456666666655432          3568889998888874444555789999999999 777776 48999999974

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.19  E-value=6.9e-09  Score=62.92  Aligned_cols=126  Identities=8%  Similarity=-0.100  Sum_probs=84.4

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc-----ccceEEEEEccCCCEEEE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH-----ESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~   76 (131)
                      ..|+. +++..........+..++++++|+++++...++.|..++.. +....+...     ...+.++.+.|+|+.+++
T Consensus        70 ~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t  147 (305)
T 3dr2_A           70 LGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT  147 (305)
T ss_dssp             EEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred             EEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence            45665 34432222455678999999999977666566789999986 444333211     134678999999998775


Q ss_pred             ----eCC-------------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCC------CcEEEEEee
Q psy15612         77 ----TGK-------------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGD------KKATVYEVI  130 (131)
Q Consensus        77 ----~~~-------------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~vw~~~  130 (131)
                          +..             .+.|..+|..+++..... .......++|+|+++.++.+...      +.|.+|++.
T Consensus       148 d~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~  223 (305)
T 3dr2_A          148 DPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR  223 (305)
T ss_dssp             CCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred             CcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence                321             246788888777665333 44567889999999977666544      678888863

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.19  E-value=3e-08  Score=59.42  Aligned_cols=125  Identities=9%  Similarity=0.049  Sum_probs=89.4

Q ss_pred             EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccceEEEEEccCCCEEEEe
Q psy15612          2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      .+||.. ++.....  .....+..+++++++...++...++.+..|+.. +....+.  .....+..+++.++|+.+++.
T Consensus        39 ~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~  116 (299)
T 2z2n_A           39 SCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTE  116 (299)
T ss_dssp             EEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred             EEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEe
Confidence            456666 4433222  234678999999999887777667889999986 3433332  234578899999999988887


Q ss_pred             CCCCeEEEeeCCCCceE-E-ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASI-F-QSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ..++.+..||. +++.. . .......+..+++++++++.++...++.+..+|.
T Consensus       117 ~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~  169 (299)
T 2z2n_A          117 MNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE  169 (299)
T ss_dssp             TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred             cCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence            77889999998 56555 2 2234567899999999988777766677777763

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.18  E-value=9.1e-09  Score=62.24  Aligned_cols=126  Identities=8%  Similarity=0.061  Sum_probs=84.8

Q ss_pred             CEEEeCCCCceeeeec-----CCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCeEEe-ec-----cccceEEEEEc
Q psy15612          1 MYLQSVSPGRQLQQHD-----FSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDKYQL-HL-----HESCVLSLRFA   68 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~-~~-----~~~~v~~~~~~   68 (131)
                      |..||..+++......     +...+..++++++ ++++++. ....|.+|+.. ++...+ ..     ....+.+++++
T Consensus        48 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d  125 (314)
T 1pjx_A           48 ILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD  125 (314)
T ss_dssp             EEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEEC
T ss_pred             EEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEEC
Confidence            4567877776543322     4467899999999 6655544 44478899988 665443 21     12357899999


Q ss_pred             cCCCEEEEeCCC---------------CeEEEeeCCCCceEEecCCCCCeEEEEEC----CCCCEEE-EecCCCcEEEEE
Q psy15612         69 ACGKWFVSTGKD---------------NLLNAWRTPYGASIFQSKESSSVLSCDIS----ADDKYIV-TGSGDKKATVYE  128 (131)
Q Consensus        69 ~~~~~~~~~~~~---------------~~i~~w~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~-~~~~d~~i~vw~  128 (131)
                      ++|+.+++...+               +.+..++.. ++.............++++    |+++.++ +...++.|.+||
T Consensus       126 ~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~  204 (314)
T 1pjx_A          126 YEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYD  204 (314)
T ss_dssp             TTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEE
T ss_pred             CCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEE
Confidence            999987776654               567778766 5554333334456889999    9997654 445678899998


Q ss_pred             e
Q psy15612        129 V  129 (131)
Q Consensus       129 ~  129 (131)
                      +
T Consensus       205 ~  205 (314)
T 1pjx_A          205 I  205 (314)
T ss_dssp             E
T ss_pred             C
Confidence            5

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.15  E-value=2.2e-08  Score=61.38  Aligned_cols=124  Identities=10%  Similarity=-0.040  Sum_probs=83.3

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeecc-----ccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLH-----ESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~   75 (131)
                      |..||.++++.. .+.....+.++.++|+++++++. .+ .+.+||..+++...+...     ...+.++.++|+|+.++
T Consensus        73 i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v  149 (326)
T 2ghs_A           73 LHELHLASGRKT-VHALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWI  149 (326)
T ss_dssp             EEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEE
T ss_pred             EEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEE
Confidence            356777766543 33445679999999999877654 44 499999988776444321     23588999999999766


Q ss_pred             EeCC------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEE-ecCCCcEEEEEe
Q psy15612         76 STGK------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVT-GSGDKKATVYEV  129 (131)
Q Consensus        76 ~~~~------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~  129 (131)
                      +...      .+.+..++  +++.............++|+|+++.++. .+.++.|.+||+
T Consensus       150 ~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~  208 (326)
T 2ghs_A          150 GTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPL  208 (326)
T ss_dssp             EEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred             EeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEc
Confidence            5432      24566666  4554433233345678999999987654 455678988885

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.14  E-value=5.5e-09  Score=66.02  Aligned_cols=128  Identities=6%  Similarity=-0.091  Sum_probs=86.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCe-EEe---ec-cccceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS--NVEVLHALKPDK-YQL---HL-HESCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~-~~~---~~-~~~~v~~~~~~~~~~~   73 (131)
                      |+.||.++++............ ++|+|+++.|+.+..++  .+..++...... ..+   .. ....+.+++++|++..
T Consensus       154 I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~  232 (409)
T 3hrp_A          154 VRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW  232 (409)
T ss_dssp             EEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE
T ss_pred             EEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe
Confidence            4678888776665543333334 99999999988887765  788888876543 222   12 4456788999995555


Q ss_pred             EEEeCCCCeEEEeeCCCCceEEe-----cCCCCCe-E-EEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612         74 FVSTGKDNLLNAWRTPYGASIFQ-----SKESSSV-L-SCDISAD-DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~~~-----~~~~~~v-~-~~~~~~~-~~~l~~~~~d~~i~vw~~  129 (131)
                      ++.+..++.|..||..++.....     .+..... . .++|+|+ +.++++-..++.|..|+.
T Consensus       233 lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~  296 (409)
T 3hrp_A          233 LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP  296 (409)
T ss_dssp             EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred             EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence            55577788899999987765422     2222222 3 8999995 555566666778888763

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.13  E-value=1.4e-09  Score=68.92  Aligned_cols=122  Identities=11%  Similarity=-0.037  Sum_probs=84.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCe-EEeecc-------ccce
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDK-YQLHLH-------ESCV   62 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~-~~~~~~-------~~~v   62 (131)
                      |.++|..+++.+..+...... .+.++||++.++.+.          .++.|.++|..+.+. ..+.-.       ....
T Consensus       101 VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P  179 (426)
T 3c75_H          101 QFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQ  179 (426)
T ss_dssp             EEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred             EEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCc
Confidence            467899999999888444444 899999999888775          356899999998885 333221       1345


Q ss_pred             EEEEEccCCCEEEEeCC--CCeEEEeeCCCCceEEecCCCCC--------eEEEEECCCCCEEEEecCCCc
Q psy15612         63 LSLRFAACGKWFVSTGK--DNLLNAWRTPYGASIFQSKESSS--------VLSCDISADDKYIVTGSGDKK  123 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~d~~  123 (131)
                      ..+.++|||++++.+..  ++.+.+.|..+++.+.....++.        ..-+.++++|++++....+++
T Consensus       180 ~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~  250 (426)
T 3c75_H          180 WMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGE  250 (426)
T ss_dssp             GGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred             ceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence            68999999999988764  57899999999888722222111        122456666666654444443

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.13  E-value=3.5e-08  Score=62.39  Aligned_cols=128  Identities=11%  Similarity=-0.036  Sum_probs=87.5

Q ss_pred             CEEEeCCCCceeee----e-cCCCCe-E-EEEECCC-CCEEEEEeCCCcEEEEeCCCCCeEEeecc--------------
Q psy15612          1 MYLQSVSPGRQLQQ----H-DFSSQI-F-SLGYCPS-GEWLAVGMENSNVEVLHALKPDKYQLHLH--------------   58 (131)
Q Consensus         1 i~iwd~~~~~~~~~----~-~~~~~v-~-~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--------------   58 (131)
                      |+.||..++.....    . +....- . .++|+|+ +.++++...++.|..|+.... ...+.++              
T Consensus       242 I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~  320 (409)
T 3hrp_A          242 FGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEA  320 (409)
T ss_dssp             EEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGC
T ss_pred             EEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCccccc
Confidence            35677776654322    1 111111 3 8999995 555555566788999987654 3233222              


Q ss_pred             -ccceEEEEEccCCCEEEEeC-CCCeEEEeeCCCCceEEecCC---------------CCCeEEEEECCCCCEEEEecCC
Q psy15612         59 -ESCVLSLRFAACGKWFVSTG-KDNLLNAWRTPYGASIFQSKE---------------SSSVLSCDISADDKYIVTGSGD  121 (131)
Q Consensus        59 -~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~d  121 (131)
                       -..+..++++|+|+.+++-. .++.|+.|+..+++.....++               -..+..++++++++++++-..+
T Consensus       321 ~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n  400 (409)
T 3hrp_A          321 LFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG  400 (409)
T ss_dssp             BCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT
T ss_pred             EeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC
Confidence             13478999999999777777 788999999877876533222               2468899999998888888888


Q ss_pred             CcEEEEEe
Q psy15612        122 KKATVYEV  129 (131)
Q Consensus       122 ~~i~vw~~  129 (131)
                      +.|+.+++
T Consensus       401 ~~Ir~i~~  408 (409)
T 3hrp_A          401 KAIRKYAV  408 (409)
T ss_dssp             CEEEEEEE
T ss_pred             CeEEEEEe
Confidence            88888775

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.11  E-value=7.7e-09  Score=67.66  Aligned_cols=127  Identities=11%  Similarity=0.002  Sum_probs=91.5

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC--------------------------------------cEE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS--------------------------------------NVE   43 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--------------------------------------~v~   43 (131)
                      -+.|.++.+...++...+....++++|+|+++++++.+.                                      .|.
T Consensus       178 tvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~  257 (595)
T 1fwx_A          178 TAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  257 (595)
T ss_dssp             EEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence            467888888877774444566788999999998887553                                      367


Q ss_pred             EEeCCC--CCe--EEeeccccceEEEEEccCCCEEEEeC-CCCeEEEeeCCCCc------------eEEecCCCCCeEEE
Q psy15612         44 VLHALK--PDK--YQLHLHESCVLSLRFAACGKWFVSTG-KDNLLNAWRTPYGA------------SIFQSKESSSVLSC  106 (131)
Q Consensus        44 ~~~~~~--~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~~------------~~~~~~~~~~v~~~  106 (131)
                      +.|.++  +..  ..+. ....+.++.++|||++++.++ .++.+.++|..+.+            .......+.....+
T Consensus       258 VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~  336 (595)
T 1fwx_A          258 VVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT  336 (595)
T ss_dssp             EEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEE
T ss_pred             EEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceE
Confidence            777776  322  2232 234567899999999877654 57889999998553            22344566789999


Q ss_pred             EECCCCCEEEEecCCCcEEEEEe
Q psy15612        107 DISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       107 ~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +|+|+|...++...|+++.+||+
T Consensus       337 aF~~dG~aY~t~~ldsqV~kwdi  359 (595)
T 1fwx_A          337 AFDGRGNAYTSLFLDSQVVKWNI  359 (595)
T ss_dssp             EECTTSEEEEEETTTTEEEEEEH
T ss_pred             EECCCCeEEEEEecCCcEEEEEh
Confidence            99999944455666999999996

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.09  E-value=1.4e-09  Score=68.08  Aligned_cols=105  Identities=8%  Similarity=-0.037  Sum_probs=78.2

Q ss_pred             EEECCCCCEEEEEeC-----CCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC----------CCCeEEEee
Q psy15612         24 LGYCPSGEWLAVGME-----NSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG----------KDNLLNAWR   87 (131)
Q Consensus        24 ~~~~~~~~~l~~~~~-----~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~   87 (131)
                      ....|+++.++....     ++.|.++|..+.+. ..+.....+ . +.++|||+.++.++          .++.+.+||
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD  115 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD  115 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence            444789998888765     57899999998886 444433333 4 99999999887765          357799999


Q ss_pred             CCCCceEE--ecCC------CCCeEEEEECCCCCEEEEecC--CCcEEEEEee
Q psy15612         88 TPYGASIF--QSKE------SSSVLSCDISADDKYIVTGSG--DKKATVYEVI  130 (131)
Q Consensus        88 ~~~~~~~~--~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~i~vw~~~  130 (131)
                      ..+.+...  ..+.      ......++++|+|++++.+..  ++.|.++|+.
T Consensus       116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~  168 (386)
T 3sjl_D          116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE  168 (386)
T ss_dssp             TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred             CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC
Confidence            99988772  2221      235678999999999887763  6789999863

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.07  E-value=1.9e-07  Score=55.94  Aligned_cols=124  Identities=10%  Similarity=0.052  Sum_probs=87.8

Q ss_pred             EEEeCCCCceeee-e-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccceEEEEEccCCCEEEEe
Q psy15612          2 YLQSVSPGRQLQQ-H-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      .+||.. ++.... + .....+..+++.+++...++...++.|..+|.. ++...+.  .....+..+++.++|+.+++.
T Consensus        44 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~  121 (300)
T 2qc5_A           44 SSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQ  121 (300)
T ss_dssp             EEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred             EEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEc
Confidence            455655 443322 1 223578899999999877776667889999987 5543332  234568899999999988887


Q ss_pred             CCCCeEEEeeCCCCceE-Ee-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         78 GKDNLLNAWRTPYGASI-FQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ..++.+..++.. ++.. .. ......+..+++.+++++.++...++.|..+|
T Consensus       122 ~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~  173 (300)
T 2qc5_A          122 LNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT  173 (300)
T ss_dssp             TTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred             cCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence            778889999987 6655 22 22456789999999999776666567777765

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.06  E-value=1.5e-07  Score=57.74  Aligned_cols=127  Identities=16%  Similarity=0.119  Sum_probs=83.0

Q ss_pred             CEEEeCCCCceeeeecC-----CCCeEEEEECCCCCEEEEEeC------CCcEEEEeCCCCCeEEeeccccceEEEEEcc
Q psy15612          1 MYLQSVSPGRQLQQHDF-----SSQIFSLGYCPSGEWLAVGME------NSNVEVLHALKPDKYQLHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~   69 (131)
                      |.+||.++++.......     ...+..+.++|+|++.++...      .+.|..++  .++...+.........++|+|
T Consensus       111 l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~  188 (326)
T 2ghs_A          111 LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSP  188 (326)
T ss_dssp             EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECT
T ss_pred             EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcC
Confidence            46788877775433321     235889999999997665432      24466666  444443333334567899999


Q ss_pred             CCCEEEEe-CCCCeEEEeeCC--CC-ce----EE--ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         70 CGKWFVST-GKDNLLNAWRTP--YG-AS----IF--QSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        70 ~~~~~~~~-~~~~~i~~w~~~--~~-~~----~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +++.++.+ +.++.|.+|+..  ++ +.    ..  .......+..++++++|++.++...++.|..||.
T Consensus       189 dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~  258 (326)
T 2ghs_A          189 DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT  258 (326)
T ss_dssp             TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred             CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence            99876544 567889999985  55 32    11  1123456788999999987776655677887764

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.05  E-value=3e-09  Score=71.20  Aligned_cols=110  Identities=11%  Similarity=0.251  Sum_probs=75.1

Q ss_pred             CCeEEEEECCCCCEEEEEe-----CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCC------------
Q psy15612         19 SQIFSLGYCPSGEWLAVGM-----ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDN------------   81 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------   81 (131)
                      ..+..+.|||||+.++.+.     ....|+++|+.+++.............++|+ |++.|+.++.+.            
T Consensus       129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~  207 (693)
T 3iuj_A          129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ  207 (693)
T ss_dssp             CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred             EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence            3578899999999988542     2356999999998864332221123578899 999888776653            


Q ss_pred             -eEEEeeCCCCce---E-Eec-C-CCCCeEEEEECCCCCEEEEecC----CCcEEEEEe
Q psy15612         82 -LLNAWRTPYGAS---I-FQS-K-ESSSVLSCDISADDKYIVTGSG----DKKATVYEV  129 (131)
Q Consensus        82 -~i~~w~~~~~~~---~-~~~-~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~vw~~  129 (131)
                       .|++|++.++..   + ... . +......+.|+|+|++++....    +..+.++|+
T Consensus       208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~  266 (693)
T 3iuj_A          208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDL  266 (693)
T ss_dssp             CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEET
T ss_pred             cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEEC
Confidence             389999887653   2 222 1 2445788999999998754332    247788775

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.04  E-value=2.6e-07  Score=55.32  Aligned_cols=125  Identities=10%  Similarity=0.046  Sum_probs=87.6

Q ss_pred             EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccCCCEEEEe
Q psy15612          2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      ..+|.. ++.....  .....+..+++.++++..++...++.+..++.. ++...+  ......+..+++.++|+..++.
T Consensus        86 ~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~  163 (300)
T 2qc5_A           86 GKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTE  163 (300)
T ss_dssp             EEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred             EEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence            455655 4443221  234668999999999887777667889999987 554332  2234568899999999977777


Q ss_pred             CCCCeEEEeeCCCCceE-Ee-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASI-FQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~-~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ..++.+..++. +++.. .. ......+..+++++++++.++....+.|.++|.
T Consensus       164 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~  216 (300)
T 2qc5_A          164 NQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT  216 (300)
T ss_dssp             TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred             cCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence            66788999998 56655 22 234467889999999987777666667877763

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.03  E-value=6.2e-08  Score=58.58  Aligned_cols=103  Identities=12%  Similarity=0.036  Sum_probs=74.5

Q ss_pred             cCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeC--CCCCeE---E---eeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612         16 DFSSQIFSLGYCPSGEWLAV-GMENSNVEVLHA--LKPDKY---Q---LHLHESCVLSLRFAACGKWFVSTGKDNLLNAW   86 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~--~~~~~~---~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w   86 (131)
                      ........++|+|+++.++. ...++.|..|++  .++...   .   +......+..+++.++|+..++....+.|..|
T Consensus       146 ~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~  225 (297)
T 3g4e_A          146 DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRL  225 (297)
T ss_dssp             EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEE
T ss_pred             eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEE
Confidence            33345678999999987654 455678999987  444431   1   12234567899999999887777777889999


Q ss_pred             eCCCCceE-EecCCCCCeEEEEEC-CCCCEEEEe
Q psy15612         87 RTPYGASI-FQSKESSSVLSCDIS-ADDKYIVTG  118 (131)
Q Consensus        87 ~~~~~~~~-~~~~~~~~v~~~~~~-~~~~~l~~~  118 (131)
                      |..+++.+ ....+...+.+++|. |+++.|+.+
T Consensus       226 d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt  259 (297)
T 3g4e_A          226 DPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVT  259 (297)
T ss_dssp             CTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred             cCCCceEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence            99988887 444445789999998 787766543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.01  E-value=2.3e-08  Score=60.60  Aligned_cols=116  Identities=8%  Similarity=0.044  Sum_probs=74.5

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCeE---Ee-eccccceEEEEEccCCC
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN------SNVEVLHALKPDKY---QL-HLHESCVLSLRFAACGK   72 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~v~~~~~~~~~~~---~~-~~~~~~v~~~~~~~~~~   72 (131)
                      .+|.++++..... .......++|+|+++.|+.+...      +.|..|++......   .+ ......+..+++.++|+
T Consensus       173 ~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~  251 (305)
T 3dr2_A          173 RLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW  251 (305)
T ss_dssp             EECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC
T ss_pred             EEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC
Confidence            4454445443333 33456789999999988777654      67999998654321   11 11234456788999999


Q ss_pred             EEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCC
Q psy15612         73 WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDK  122 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  122 (131)
                      ..++ .. +.|.+|+.. ++.+.....+..+.+++|+|+++.|..++.++
T Consensus       252 lwv~-~~-~gv~~~~~~-g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~  298 (305)
T 3dr2_A          252 LWSS-SG-TGVCVFDSD-GQLLGHIPTPGTASNCTFDQAQQRLFITGGPC  298 (305)
T ss_dssp             EEEC-CS-SEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEEEETTE
T ss_pred             EEEe-cC-CcEEEECCC-CCEEEEEECCCceeEEEEeCCCCEEEEEcCCe
Confidence            5544 43 458999984 66552222333688999999988887766654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.00  E-value=9.6e-08  Score=57.03  Aligned_cols=127  Identities=10%  Similarity=0.031  Sum_probs=87.6

Q ss_pred             CEEEeCCCCceeeeecCC-CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec--cc---cceEEEEEccCCCE
Q psy15612          1 MYLQSVSPGRQLQQHDFS-SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL--HE---SCVLSLRFAACGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~--~~---~~v~~~~~~~~~~~   73 (131)
                      +.++|..+.+.+..+... ..-  +.+++||+.++.+..++++.++|..+.+. ..+..  ..   ..+..+.|. +|..
T Consensus        88 v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l  164 (266)
T 2iwa_A           88 GFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV  164 (266)
T ss_dssp             EEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred             EEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence            357898888888877433 222  33556888777777788999999998775 33321  11   235678887 7766


Q ss_pred             EEEeCCCCeEEEeeCCCCceEEecC--------------CCCCeEEEEECCCCCEE-EEecCCCcEEEEEee
Q psy15612         74 FVSTGKDNLLNAWRTPYGASIFQSK--------------ESSSVLSCDISADDKYI-VTGSGDKKATVYEVI  130 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~  130 (131)
                      .+.....+.|.+.|..+++......              .......++++|+++.+ +++....++.+.++.
T Consensus       165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~  236 (266)
T 2iwa_A          165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH  236 (266)
T ss_dssp             EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred             EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence            6666668899999999999872111              11466899999998765 455567778777663

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.94  E-value=4.1e-08  Score=65.81  Aligned_cols=127  Identities=7%  Similarity=0.037  Sum_probs=80.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC-------------cEEEEeCCCCCe--EEe---ec-cccc
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS-------------NVEVLHALKPDK--YQL---HL-HESC   61 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-------------~v~~~~~~~~~~--~~~---~~-~~~~   61 (131)
                      |+++|+++++.+...-.......++|+ |++.|+.+..+.             .|.+|++.+...  ..+   .. +...
T Consensus       157 i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~  235 (693)
T 3iuj_A          157 IHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR  235 (693)
T ss_dssp             EEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCS
T ss_pred             EEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeE
Confidence            578999999876542111113567899 999998887763             389999877652  222   22 3345


Q ss_pred             eEEEEEccCCCEEEEeC----CCCeEEEeeCCCCc--eEEecCCCCCeEEEEECCCCCEEE-EecCC---CcEEEEEe
Q psy15612         62 VLSLRFAACGKWFVSTG----KDNLLNAWRTPYGA--SIFQSKESSSVLSCDISADDKYIV-TGSGD---KKATVYEV  129 (131)
Q Consensus        62 v~~~~~~~~~~~~~~~~----~~~~i~~w~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d---~~i~vw~~  129 (131)
                      ...+.|+|||++++...    ..+.++++|+.++.  ...+..+....... +++++..++ .+..+   +.|..+|+
T Consensus       236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~  312 (693)
T 3iuj_A          236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDA  312 (693)
T ss_dssp             EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEET
T ss_pred             EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence            67899999999875432    23579999987763  33444444444444 566666554 44333   45766664

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.92  E-value=1.1e-07  Score=60.52  Aligned_cols=129  Identities=15%  Similarity=0.095  Sum_probs=88.1

Q ss_pred             CEEEeCCCCceeeeecCC----CCeEEEEECCCCCEEEEEe-------------------CCCcEEEEeCCCCCe-EEee
Q psy15612          1 MYLQSVSPGRQLQQHDFS----SQIFSLGYCPSGEWLAVGM-------------------ENSNVEVLHALKPDK-YQLH   56 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------------------~~~~v~~~~~~~~~~-~~~~   56 (131)
                      |.+.|.++++.+..+...    .--+.+.|+|+++.+++..                   ...+|.+||+.+++. .++.
T Consensus       166 v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~  245 (462)
T 2ece_A          166 ILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT  245 (462)
T ss_dssp             EEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred             EEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence            357888888888877322    2245688899999888874                   367899999988764 3333


Q ss_pred             c--cccceEEEEE--ccCCCEEEEeCC------CCeEEEeeCCCCceE--Ee--cCC-----------------CCCeEE
Q psy15612         57 L--HESCVLSLRF--AACGKWFVSTGK------DNLLNAWRTPYGASI--FQ--SKE-----------------SSSVLS  105 (131)
Q Consensus        57 ~--~~~~v~~~~~--~~~~~~~~~~~~------~~~i~~w~~~~~~~~--~~--~~~-----------------~~~v~~  105 (131)
                      .  .......+.|  +|++++.+.++.      ++.|.+|....++..  ..  ...                 ...+..
T Consensus       246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~  325 (462)
T 2ece_A          246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD  325 (462)
T ss_dssp             SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred             cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence            2  2234566666  999998877664      557777665544332  10  000                 245788


Q ss_pred             EEECCCCCEEEEecC-CCcEEEEEe
Q psy15612        106 CDISADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus       106 ~~~~~~~~~l~~~~~-d~~i~vw~~  129 (131)
                      +.++++|++|+++.. .+.|.++|+
T Consensus       326 I~lS~DGrfLYVSnrg~d~VavfdV  350 (462)
T 2ece_A          326 IDISLDDKFLYLSLWGIGEVRQYDI  350 (462)
T ss_dssp             EEECTTSCEEEEEETTTTEEEEEEC
T ss_pred             EEECCCCCEEEEEeCCCCEEEEEEe
Confidence            999999999977665 678999986

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.87  E-value=9.3e-08  Score=58.98  Aligned_cols=101  Identities=9%  Similarity=0.027  Sum_probs=69.9

Q ss_pred             CeEEEEECCCCCEEEEEeCCC-cEEEEeCC---CCCe--------EEeeccccceEEEEEccCCCEEEEeCCCCeEEEee
Q psy15612         20 QIFSLGYCPSGEWLAVGMENS-NVEVLHAL---KPDK--------YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWR   87 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~-~v~~~~~~---~~~~--------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~   87 (131)
                      .+..++++|+++.|+.+...+ .+..++..   ....        ....++...+..++++++|+.+++...++.|.+||
T Consensus       196 ~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d  275 (343)
T 2qe8_A          196 GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT  275 (343)
T ss_dssp             CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred             ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence            368899999999888876655 45555432   1110        01122334566799999999888888899999999


Q ss_pred             CCCCceEEec--CCCCCeEEEEECCCCCEEEEecC
Q psy15612         88 TPYGASIFQS--KESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        88 ~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      ..+++.....  .....+..+++.++++++++.+.
T Consensus       276 ~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~  310 (343)
T 2qe8_A          276 SADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ  310 (343)
T ss_dssp             TTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred             CCCCCEEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence            8567654222  23466899999999988777654

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.86  E-value=9.3e-08  Score=58.96  Aligned_cols=129  Identities=9%  Similarity=-0.010  Sum_probs=83.7

Q ss_pred             CEEEeCCCCceeeeecC-------CCCeEEEEECCCCCEE-EEEe---CCCcEEEEeCCCCCeEE-eecc----------
Q psy15612          1 MYLQSVSPGRQLQQHDF-------SSQIFSLGYCPSGEWL-AVGM---ENSNVEVLHALKPDKYQ-LHLH----------   58 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l-~~~~---~~~~v~~~~~~~~~~~~-~~~~----------   58 (131)
                      |.+||+.+++.+..+..       ...+..++++|++..+ ++..   .++.|.+||+.+++... +..|          
T Consensus        95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~  174 (343)
T 2qe8_A           95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL  174 (343)
T ss_dssp             EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred             EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence            45789888887665522       1346889999865554 4444   56789999998766433 2111          


Q ss_pred             -------------------ccceEEEEEccCCCEEEEeCCCC-eEEEeeCC---CCce--------EEecCCCCCeEEEE
Q psy15612         59 -------------------ESCVLSLRFAACGKWFVSTGKDN-LLNAWRTP---YGAS--------IFQSKESSSVLSCD  107 (131)
Q Consensus        59 -------------------~~~v~~~~~~~~~~~~~~~~~~~-~i~~w~~~---~~~~--------~~~~~~~~~v~~~~  107 (131)
                                         ...+..++|+|+|+.++.+...+ .+..++..   .+..        ....++.+....++
T Consensus       175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia  254 (343)
T 2qe8_A          175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGIS  254 (343)
T ss_dssp             EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEE
T ss_pred             eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEE
Confidence                               02357899999999887775554 55555431   1110        01112234566789


Q ss_pred             ECCCCCEEEEecCCCcEEEEEe
Q psy15612        108 ISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       108 ~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++++|+++++...++.|.+||.
T Consensus       255 ~d~~G~l~va~~~~~~V~~~d~  276 (343)
T 2qe8_A          255 IDKDHNIYVGDLAHSAIGVITS  276 (343)
T ss_dssp             ECTTCCEEEEEGGGTEEEEEET
T ss_pred             ECCCCCEEEEccCCCeEEEEEC
Confidence            9999998888888889999985

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.86  E-value=1.8e-07  Score=61.35  Aligned_cols=129  Identities=14%  Similarity=0.075  Sum_probs=89.7

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEE-C-CCCCEEEEEeC------------------CCcEEEEeCCCCCe-EEeec
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGY-C-PSGEWLAVGME------------------NSNVEVLHALKPDK-YQLHL   57 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~-~-~~~~~l~~~~~------------------~~~v~~~~~~~~~~-~~~~~   57 (131)
                      |.+.|+.+.++...+  .....+-.+++ + |+++++++++.                  ++.+.+.|..+.+. .++.-
T Consensus       114 VavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V  193 (595)
T 1fwx_A          114 VARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV  193 (595)
T ss_dssp             EEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE
T ss_pred             EEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe
Confidence            356788888887744  44566888887 5 99999888742                  34688899988775 33332


Q ss_pred             cccceEEEEEccCCCEEEEeCCCC--------------------------------------eEEEeeCCC--Cce-EEe
Q psy15612         58 HESCVLSLRFAACGKWFVSTGKDN--------------------------------------LLNAWRTPY--GAS-IFQ   96 (131)
Q Consensus        58 ~~~~v~~~~~~~~~~~~~~~~~~~--------------------------------------~i~~w~~~~--~~~-~~~   96 (131)
                      . .....++.+|+|+++++++.+.                                      .+.+.|..+  ++. +..
T Consensus       194 g-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~  272 (595)
T 1fwx_A          194 S-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRY  272 (595)
T ss_dssp             S-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEE
T ss_pred             C-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEE
Confidence            2 2456788999999988876543                                      366666665  333 223


Q ss_pred             cCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEee
Q psy15612         97 SKESSSVLSCDISADDKYIVTGS-GDKKATVYEVI  130 (131)
Q Consensus        97 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~~  130 (131)
                      ...+....++.++|||++++.++ .+.++.++|+.
T Consensus       273 Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~  307 (595)
T 1fwx_A          273 IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT  307 (595)
T ss_dssp             EEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred             EecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence            33345667899999999887665 47889999864

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.83  E-value=3.5e-06  Score=53.72  Aligned_cols=128  Identities=8%  Similarity=0.020  Sum_probs=82.9

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC-C----cEEEEeCCCCCe--EEeeccccceEEEEEcc-CCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN-S----NVEVLHALKPDK--YQLHLHESCVLSLRFAA-CGK   72 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~----~v~~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~   72 (131)
                      |+.+|.++++.............++++++++.|+.+... +    .+..++......  ..+. ....+..++++| +|.
T Consensus       161 I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~  239 (430)
T 3tc9_A          161 TRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPINGE  239 (430)
T ss_dssp             EEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCC
T ss_pred             EEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCE
Confidence            456777766554444555678999999999966666542 1    233344433221  2222 234467888999 677


Q ss_pred             EEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         73 WFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        73 ~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      .+++-...+.|..++..++...  ...........++|+|++++++ +-...+.|..++.
T Consensus       240 lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~  299 (430)
T 3tc9_A          240 LYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY  299 (430)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             EEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence            6666667788999999877653  2333345678999999999554 4445677888764

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.82  E-value=2e-08  Score=62.65  Aligned_cols=88  Identities=13%  Similarity=-0.056  Sum_probs=67.5

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCe-EEeecc-------ccceE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDK-YQLHLH-------ESCVL   63 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~-~~~~~~-------~~~v~   63 (131)
                      .+.|..+++.+..+...... .+.++||++.++.+.          .++.|.++|+.+.+. ..+...       .....
T Consensus        49 svID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~  127 (368)
T 1mda_H           49 WVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH  127 (368)
T ss_dssp             EEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT
T ss_pred             EEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc
Confidence            47899999999888433334 799999999988876          367899999999886 444322       13467


Q ss_pred             EEEEccCCCEEEEeCC--CCeEEE--eeCCC
Q psy15612         64 SLRFAACGKWFVSTGK--DNLLNA--WRTPY   90 (131)
Q Consensus        64 ~~~~~~~~~~~~~~~~--~~~i~~--w~~~~   90 (131)
                      .+.++|||++++.+..  .+.+.+  +|..+
T Consensus       128 ~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          128 IIGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             SEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             eEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence            8999999999988764  466888  99876

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.80  E-value=8.2e-11  Score=73.31  Aligned_cols=124  Identities=10%  Similarity=0.027  Sum_probs=60.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eeecccc-ceE-EEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLHLHES-CVL-SLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~-~v~-~~~~~~~~~~~~~~   77 (131)
                      |+.||.++|+.+..+.. +.+.+..+.+++..++.++.++.+..||..+++.. ....+.. .+. ..... ++..++++
T Consensus        21 v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g   98 (369)
T 2hz6_A           21 LHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMG   98 (369)
T ss_dssp             EEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCC
T ss_pred             EEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEE
Confidence            46899999999887754 55555555567777777789999999999877642 2221111 110 00111 34456777


Q ss_pred             CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.++.+..||..+|+.+.......   ...++|++..+++++.|+.+..||.
T Consensus        99 ~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~  147 (369)
T 2hz6_A           99 KKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDT  147 (369)
T ss_dssp             EEEEEEEEECCC-------------------------EEEEEEEEEEECCCS
T ss_pred             eCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEEC
Confidence            788999999999998873222221   1345667788888888888888875

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.80  E-value=1.2e-06  Score=55.99  Aligned_cols=127  Identities=10%  Similarity=0.140  Sum_probs=83.6

Q ss_pred             CEEEeCCCC----ceeeeec-------CC-CCeEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCeE-Eeec--c-
Q psy15612          1 MYLQSVSPG----RQLQQHD-------FS-SQIFSLGYCPSGEWLAVGMEN------SNVEVLHALKPDKY-QLHL--H-   58 (131)
Q Consensus         1 i~iwd~~~~----~~~~~~~-------~~-~~v~~~~~~~~~~~l~~~~~~------~~v~~~~~~~~~~~-~~~~--~-   58 (131)
                      |+++|+.+.    +..+.+.       .. ...-.+...|+| .++++..+      +.+.++|..+.++. +...  . 
T Consensus       108 I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~  186 (462)
T 2ece_A          108 IYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD  186 (462)
T ss_dssp             EEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT
T ss_pred             EEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC
Confidence            567887644    4444442       11 245567788999 66665444      67999999988863 3321  1 


Q ss_pred             ccceEEEEEccCCCEEEEeC-------------------CCCeEEEeeCCCCceEEe--cC-CCCCeEEEEE--CCCCCE
Q psy15612         59 ESCVLSLRFAACGKWFVSTG-------------------KDNLLNAWRTPYGASIFQ--SK-ESSSVLSCDI--SADDKY  114 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~-------------------~~~~i~~w~~~~~~~~~~--~~-~~~~v~~~~~--~~~~~~  114 (131)
                      ....+++.|+|+++.++++.                   ....|.+||+.+++....  .+ .......+.|  +|++++
T Consensus       187 ~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~  266 (462)
T 2ece_A          187 QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLM  266 (462)
T ss_dssp             CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCE
T ss_pred             ccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCE
Confidence            12345688999999888885                   368899999998876622  22 2245566666  999998


Q ss_pred             EEEecC------CCcEEEEE
Q psy15612        115 IVTGSG------DKKATVYE  128 (131)
Q Consensus       115 l~~~~~------d~~i~vw~  128 (131)
                      ++.++.      +++|.+|.
T Consensus       267 aYV~~e~~~~~Lss~V~v~~  286 (462)
T 2ece_A          267 GFINMVVSLKDLSSSIWLWF  286 (462)
T ss_dssp             EEEEEEEETTTCCEEEEEEE
T ss_pred             EEEEEeeeccCCCceEEEEE
Confidence            877664      45665543

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.79  E-value=6.8e-08  Score=61.35  Aligned_cols=100  Identities=9%  Similarity=0.004  Sum_probs=73.4

Q ss_pred             CCCCEEEEEeCC-----CcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC----------CCCeEEEeeCCCC
Q psy15612         28 PSGEWLAVGMEN-----SNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG----------KDNLLNAWRTPYG   91 (131)
Q Consensus        28 ~~~~~l~~~~~~-----~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~~~~~   91 (131)
                      |+++.++.....     +.|.++|..+.+. ..+..-.. . .+.++|||+.++.+.          .++.|.++|..+.
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~  159 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL-P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF  159 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC-C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence            466766665542     5899999999886 44443333 3 899999999888775          3678999999999


Q ss_pred             ceEE--ecC------CCCCeEEEEECCCCCEEEEecC--CCcEEEEEe
Q psy15612         92 ASIF--QSK------ESSSVLSCDISADDKYIVTGSG--DKKATVYEV  129 (131)
Q Consensus        92 ~~~~--~~~------~~~~v~~~~~~~~~~~l~~~~~--d~~i~vw~~  129 (131)
                      +...  ..+      .......+.++|+|++++.+..  ++.|.+.|+
T Consensus       160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~  207 (426)
T 3c75_H          160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDL  207 (426)
T ss_dssp             CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEET
T ss_pred             cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEEC
Confidence            8872  222      1244678999999999988764  578988886

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.79  E-value=6.1e-07  Score=53.31  Aligned_cols=117  Identities=9%  Similarity=0.115  Sum_probs=80.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec--cc---cceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL--HE---SCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~--~~---~~v~~~~~~~~~~~~   74 (131)
                      +.+||.++.+.+..+.....-..+  +++++.|+....++++.++|..+.+. ..+..  ..   ..+..+.|. +|+..
T Consensus       109 v~v~D~~t~~~~~ti~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly  185 (262)
T 3nol_A          109 GFVWNIRNLRQVRSFNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF  185 (262)
T ss_dssp             EEEEETTTCCEEEEEECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred             EEEEECccCcEEEEEECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence            357899999998888544432333  35777777766678899999998875 33322  11   234557776 78766


Q ss_pred             EEeCCCCeEEEeeCCCCceEE-e-c-----------CCCCCeEEEEECCCCCEEEEecC
Q psy15612         75 VSTGKDNLLNAWRTPYGASIF-Q-S-----------KESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~~-~-~-----------~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      +..-.++.|.+.|..+++.+. . .           ........++++|+++.|+.++.
T Consensus       186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            666678899999999999871 1 1           01245689999998887766654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.78  E-value=5.5e-07  Score=53.79  Aligned_cols=124  Identities=10%  Similarity=-0.043  Sum_probs=80.1

Q ss_pred             CEEEeCCCCceeeeecCCC--CeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSS--QIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++.|+++++.+..+....  ....+++.  +..+ ++...++.+.++|..+.+. .++.....  ....+++||+.++.
T Consensus        46 v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~v  121 (266)
T 2iwa_A           46 VRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYG  121 (266)
T ss_dssp             EEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEE
T ss_pred             EEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEE
Confidence            4678999999887763322  22344443  4454 4455678899999998775 34432212  23446678887777


Q ss_pred             eCCCCeEEEeeCCCCceEEec--C-CC---CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         77 TGKDNLLNAWRTPYGASIFQS--K-ES---SSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~~~~--~-~~---~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +..++.+.++|..+.+.....  + .+   ..+..+.|. +++..+....++.|.+.|.
T Consensus       122 s~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~  179 (266)
T 2iwa_A          122 SDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISA  179 (266)
T ss_dssp             ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEET
T ss_pred             ECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEEC
Confidence            777889999999988776221  1 11   246677887 6665555555678888775

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.78  E-value=1.2e-06  Score=52.11  Aligned_cols=116  Identities=9%  Similarity=0.020  Sum_probs=80.1

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee--cccc---ceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH--LHES---CVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~--~~~~---~v~~~~~~~~~~~~   74 (131)
                      +.+||.++.+.+..+.....-..++  ++++.|+....++++.++|..+.+. ..+.  ....   .+..+.|. +|+.+
T Consensus       118 v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ly  194 (268)
T 3nok_A          118 LFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIY  194 (268)
T ss_dssp             EEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred             EEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEE
Confidence            3578999999998885444333343  5788888777788999999998875 3332  2222   34567776 77766


Q ss_pred             EEeCCCCeEEEeeCCCCceEE-e-c------------CCCCCeEEEEECCCCCEEEEec
Q psy15612         75 VSTGKDNLLNAWRTPYGASIF-Q-S------------KESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~~-~-~------------~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      +..-..+.|.+.|..+++.+. . .            ........+|++|+++.|+.++
T Consensus       195 anvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          195 ANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             EEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             EEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            666678899999999999871 1 1            1224678999999766555444

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.67  E-value=1.7e-06  Score=51.48  Aligned_cols=125  Identities=9%  Similarity=0.073  Sum_probs=79.8

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |+.+|+++++.+..+............+++..|.. ...++.+.++|..+.+. .++.. ..  ....+++|++.++.+.
T Consensus        67 v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~-~~--eG~glt~dg~~L~~Sd  143 (262)
T 3nol_A           67 IRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNY-DG--EGWGLTHNDQYLIMSD  143 (262)
T ss_dssp             EEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEEC-SS--CCCCEEECSSCEEECC
T ss_pred             EEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEEC-CC--CceEEecCCCEEEEEC
Confidence            47789999999888754444444333344555544 45688899999998886 33432 22  2234456788777777


Q ss_pred             CCCeEEEeeCCCCceEEe--c-CCC---CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASIFQ--S-KES---SSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~--~-~~~---~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ..+.+.++|..+.+....  . ..+   ..+..+.|. +|+..+....++.|.+.|.
T Consensus       144 Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp  199 (262)
T 3nol_A          144 GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDP  199 (262)
T ss_dssp             SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECT
T ss_pred             CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEEC
Confidence            788899999998887721  1 111   334456765 6665555545667776654

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.67  E-value=7.4e-06  Score=48.26  Aligned_cols=117  Identities=6%  Similarity=0.093  Sum_probs=80.3

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeec--cc---cceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHL--HE---SCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~--~~---~~v~~~~~~~~~~~~   74 (131)
                      +.+||.++.+.+..+.....-..++  ++++.|+....++.|.++|..+.+. ..+..  +.   ..+..+.+. +|+.+
T Consensus        87 v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly  163 (243)
T 3mbr_X           87 GFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL  163 (243)
T ss_dssp             EEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred             EEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence            3578999999998885444434444  5677777777788999999998875 33322  21   234566665 67766


Q ss_pred             EEeCCCCeEEEeeCCCCceE-Eec-------------CCCCCeEEEEECCCCCEEEEecC
Q psy15612         75 VSTGKDNLLNAWRTPYGASI-FQS-------------KESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~-~~~-------------~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      +..-..+.|.+.|..+|+.+ ...             ........++++|+++.|+..+.
T Consensus       164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            66666889999999999987 111             12245689999998776655543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.64  E-value=5.9e-07  Score=60.25  Aligned_cols=130  Identities=10%  Similarity=0.075  Sum_probs=85.4

Q ss_pred             CEEEeCCCCceeeeec---CC-------CCeEEEEECCCC---CEEEEEeCCCcEEEEeCCCCCeEE-eecc--------
Q psy15612          1 MYLQSVSPGRQLQQHD---FS-------SQIFSLGYCPSG---EWLAVGMENSNVEVLHALKPDKYQ-LHLH--------   58 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~---~~-------~~v~~~~~~~~~---~~l~~~~~~~~v~~~~~~~~~~~~-~~~~--------   58 (131)
                      |..+|.++|+.+..+.   +.       ..........+|   ..++.++.++.+.++|..+++... ....        
T Consensus       285 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~  364 (677)
T 1kb0_A          285 IVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGY  364 (677)
T ss_dssp             EEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred             EEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccccc
Confidence            3567888998887652   21       122333334467   578888999999999999888521 1100        


Q ss_pred             ---ccce------------------------EEEEEccCCCEEEEeCC--------------------------------
Q psy15612         59 ---ESCV------------------------LSLRFAACGKWFVSTGK--------------------------------   79 (131)
Q Consensus        59 ---~~~v------------------------~~~~~~~~~~~~~~~~~--------------------------------   79 (131)
                         ...+                        ..++++|+...+++...                                
T Consensus       365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~  444 (677)
T 1kb0_A          365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK  444 (677)
T ss_dssp             CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred             CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence               0001                        14688898887766432                                


Q ss_pred             -----------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 -----------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 -----------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                                 .+.+..||+.+++.+....+...+....+...+..++.++.|+.+++||+.
T Consensus       445 ~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~  506 (677)
T 1kb0_A          445 FFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA  506 (677)
T ss_dssp             EECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred             ccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence                       167999999999988333334444445566677888888899999999863

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.63  E-value=1.3e-07  Score=59.11  Aligned_cols=87  Identities=9%  Similarity=-0.166  Sum_probs=64.5

Q ss_pred             cEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC----------CCCeEEEeeCCCCceEEe--cC--C----CC
Q psy15612         41 NVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG----------KDNLLNAWRTPYGASIFQ--SK--E----SS  101 (131)
Q Consensus        41 ~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~----------~~~~i~~w~~~~~~~~~~--~~--~----~~  101 (131)
                      .+.++|..+.+. .++.....+  .+.++||++.++.+.          .++.+.+||..+++....  .+  .    ..
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~  124 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP  124 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred             eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence            788999998886 444433333  799999999888775          467899999999998822  22  1    13


Q ss_pred             CeEEEEECCCCCEEEEecC--CCcEEE--EEe
Q psy15612        102 SVLSCDISADDKYIVTGSG--DKKATV--YEV  129 (131)
Q Consensus       102 ~v~~~~~~~~~~~l~~~~~--d~~i~v--w~~  129 (131)
                      ....++++|+|++++.+..  +..+.+  +|+
T Consensus       125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~  156 (368)
T 1mda_H          125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGA  156 (368)
T ss_dssp             CTTSEEECTTSSCEEEEECSSSCEEEEEETTT
T ss_pred             CcceEEEcCCCCEEEEEccCCCCeEEEEEEch
Confidence            5678999999999988764  356777  664

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.63  E-value=1.2e-06  Score=59.46  Aligned_cols=107  Identities=11%  Similarity=0.122  Sum_probs=70.9

Q ss_pred             CeEEEEEC-CCCCEEEEEeC-C----CcEEEEeCCCC-CeE--EeeccccceEEEEEccCCCEEEEeCCC-----CeEEE
Q psy15612         20 QIFSLGYC-PSGEWLAVGME-N----SNVEVLHALKP-DKY--QLHLHESCVLSLRFAACGKWFVSTGKD-----NLLNA   85 (131)
Q Consensus        20 ~v~~~~~~-~~~~~l~~~~~-~----~~v~~~~~~~~-~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~   85 (131)
                      .+....|| |||+.|+.... +    ..|.++|+.++ +..  .+.   .....+.|+|||+.|+....+     ..|+.
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            57789999 99998876533 2    24999999887 521  111   123468899999988766554     25777


Q ss_pred             eeCCCCce---E-EecCCCCCeEEEEECCCCCEEEEecC---CCcEEEEEe
Q psy15612         86 WRTPYGAS---I-FQSKESSSVLSCDISADDKYIVTGSG---DKKATVYEV  129 (131)
Q Consensus        86 w~~~~~~~---~-~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~vw~~  129 (131)
                      +++.++..   + ...........+.|+|+|++|+..+.   ...+.++|+
T Consensus       252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~  302 (751)
T 2xe4_A          252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL  302 (751)
T ss_dssp             EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred             EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence            88877642   2 22233455678899999998875542   234555554

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.57  E-value=2.9e-06  Score=50.57  Aligned_cols=124  Identities=9%  Similarity=0.021  Sum_probs=77.8

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |+.+|+++++.+..+ ...........+++.. ......++.+.++|..+.+. .++.. ...-..+  .+|++.++.+.
T Consensus        77 v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-~~eGwGL--t~Dg~~L~vSd  152 (268)
T 3nok_A           77 LRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY-SGEGWGL--CYWNGKLVRSD  152 (268)
T ss_dssp             EEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC-SSCCCCE--EEETTEEEEEC
T ss_pred             EEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC-CCceeEE--ecCCCEEEEEC
Confidence            467888998888776 4444433222334444 44455688999999998886 33432 2322333  46788888777


Q ss_pred             CCCeEEEeeCCCCceEEec---CCC---CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASIFQS---KES---SSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~---~~~---~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ..+.+.++|..+.+.+...   ..+   ..+..+.|. +|+..+....+..|.+.|.
T Consensus       153 Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp  208 (268)
T 3nok_A          153 GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP  208 (268)
T ss_dssp             SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred             CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence            7899999999998877211   122   234566666 6665555545666766654

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.55  E-value=1.9e-05  Score=46.90  Aligned_cols=128  Identities=8%  Similarity=-0.096  Sum_probs=78.5

Q ss_pred             EEEeCCCCceeeeec-CCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEEEeC
Q psy15612          2 YLQSVSPGRQLQQHD-FSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      ..+|...+....... .......++++|++..++.+ ...+.|.++++.......+.. ....+..++++|++..++.+.
T Consensus        61 ~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~  140 (267)
T 1npe_A           61 GRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTD  140 (267)
T ss_dssp             EEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred             EEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEE
Confidence            345555433322222 22567899999876655544 456789999987655433322 224678999999766555443


Q ss_pred             C---CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         79 K---DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        79 ~---~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      .   .+.|..+++...... ...........++++|++..++ +-...+.|.++|+
T Consensus       141 ~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~  196 (267)
T 1npe_A          141 WNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP  196 (267)
T ss_dssp             CCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence            3   367888887543322 2223345688999999876665 4445677888774

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.54  E-value=3.9e-06  Score=56.53  Aligned_cols=129  Identities=10%  Similarity=0.088  Sum_probs=82.4

Q ss_pred             CEEEeCCCCceeeeec---CC-------CCeEEEEECCCCC---EEEEEeCCCcEEEEeCCCCCeEE-eeccc-------
Q psy15612          1 MYLQSVSPGRQLQQHD---FS-------SQIFSLGYCPSGE---WLAVGMENSNVEVLHALKPDKYQ-LHLHE-------   59 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~---~~-------~~v~~~~~~~~~~---~l~~~~~~~~v~~~~~~~~~~~~-~~~~~-------   59 (131)
                      |..+|.++|+.+..+.   +.       ..+.......+|+   .++.++.++.+.++|..+++... .....       
T Consensus       277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~  356 (689)
T 1yiq_A          277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM  356 (689)
T ss_dssp             EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred             EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence            3568999999887662   21       1222222223554   67888899999999999888531 10000       


Q ss_pred             ---------------------c-----------ceEEEEEccCCCEEEEeCC----------------------------
Q psy15612         60 ---------------------S-----------CVLSLRFAACGKWFVSTGK----------------------------   79 (131)
Q Consensus        60 ---------------------~-----------~v~~~~~~~~~~~~~~~~~----------------------------   79 (131)
                                           .           .-..++++|+...+++...                            
T Consensus       357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  436 (689)
T 1yiq_A          357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT  436 (689)
T ss_dssp             ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred             CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence                                 0           0012678888777665421                            


Q ss_pred             -----------------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         80 -----------------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        80 -----------------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                                       ++.+..||+.+|+.+.............+...+.+++.++.|+.++.||.
T Consensus       437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~  503 (689)
T 1yiq_A          437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAA  503 (689)
T ss_dssp             CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred             cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEEC
Confidence                             36799999999998833333333333355557788888999999999985

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.54  E-value=1.6e-05  Score=46.92  Aligned_cols=126  Identities=8%  Similarity=0.007  Sum_probs=77.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |+.+|+++++.+...............+.+..| .....++.+.++|..+.+..........-..+  .+++..++.+..
T Consensus        45 v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwgl--t~dg~~L~vSdg  122 (243)
T 3mbr_X           45 VRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWAL--TSDDSHLYMSDG  122 (243)
T ss_dssp             EEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEE--EECSSCEEEECS
T ss_pred             EEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEE--eeCCCEEEEECC
Confidence            467899999998877544444333333344444 44566889999999988863322223333344  457777777777


Q ss_pred             CCeEEEeeCCCCceEEec---CCC---CCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         80 DNLLNAWRTPYGASIFQS---KES---SSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~---~~~---~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++.+.++|..+.+.+...   .++   ..+..+.+. +|+..+....+..|.+.|.
T Consensus       123 s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp  177 (243)
T 3mbr_X          123 TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDP  177 (243)
T ss_dssp             SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECT
T ss_pred             CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEEC
Confidence            889999999988876211   111   334455554 5555554444556666554

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.53  E-value=7.5e-06  Score=55.06  Aligned_cols=77  Identities=12%  Similarity=0.052  Sum_probs=51.8

Q ss_pred             CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEE
Q psy15612         40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIV  116 (131)
Q Consensus        40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~  116 (131)
                      +.|..||+.+++..-...+...+....+..++..++.++.++.++.||..+|+.+  +..+......-+.+.++|+.++
T Consensus       457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v  535 (677)
T 1kb0_A          457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV  535 (677)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence            6788999998885332223333444456667788888899999999999999998  3333333333455667777543

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.51  E-value=3.7e-05  Score=49.12  Aligned_cols=128  Identities=7%  Similarity=0.004  Sum_probs=78.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCCe-EEeeccccceEEEEEcc-CCCE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS-----NVEVLHALKPDK-YQLHLHESCVLSLRFAA-CGKW   73 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~   73 (131)
                      |+.+|..+++.............++++++|+ |+.+...+     .+...+...... ......-.....++++| +|..
T Consensus       164 I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~l  242 (433)
T 4hw6_A          164 FRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKI  242 (433)
T ss_dssp             EEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCE
T ss_pred             EEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeE
Confidence            4567777676655555556789999999999 44444321     133333332221 11111234566788999 6766


Q ss_pred             EEEeCCCCeEEEeeCCCCce-E--EecCCCCCeEEEEECCCCCEEEE-ecCCCcEEEEEe
Q psy15612         74 FVSTGKDNLLNAWRTPYGAS-I--FQSKESSSVLSCDISADDKYIVT-GSGDKKATVYEV  129 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~-~--~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~  129 (131)
                      .++-..++.|+.++..++.. .  ...........++++|+++.|+. -...+.|..+++
T Consensus       243 yv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~  302 (433)
T 4hw6_A          243 YYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY  302 (433)
T ss_dssp             EECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred             EEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence            66666678899999987766 2  22223334457999999995544 445677877663

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.44  E-value=4.8e-05  Score=46.18  Aligned_cols=120  Identities=12%  Similarity=0.087  Sum_probs=75.4

Q ss_pred             CceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC--CeEEEe
Q psy15612          9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD--NLLNAW   86 (131)
Q Consensus         9 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~w   86 (131)
                      .+.+..+........++|+|+++.+++...++.|..+|..+.... .......+..+++.++|+.+++....  ..+..+
T Consensus        22 ~~~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~-~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~  100 (306)
T 2p4o_A           22 AKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQI-HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSL  100 (306)
T ss_dssp             EEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEE-EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             ceEeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEE-EEeCCCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence            344444544467889999999987666667888999998764332 22334568899999999965554332  246677


Q ss_pred             eCCCCceEEe--cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         87 RTPYGASIFQ--SKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        87 ~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +..+++....  .........++..+++..+++-..++.|..+|.
T Consensus       101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~  145 (306)
T 2p4o_A          101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDV  145 (306)
T ss_dssp             ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred             cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence            8777776522  222333455555555555555445666666663

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.39  E-value=1.3e-05  Score=54.52  Aligned_cols=120  Identities=8%  Similarity=0.000  Sum_probs=69.7

Q ss_pred             CEEEeCCCC-ceeeeecCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCCe---EEee-ccccceEEEEEccC
Q psy15612          1 MYLQSVSPG-RQLQQHDFSSQIFSLGYCPSGEWLAVGMEN-----SNVEVLHALKPDK---YQLH-LHESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~v~~~~~~~~~~---~~~~-~~~~~v~~~~~~~~   70 (131)
                      |+++|+.++ +.+... .......+.|+||++.|+....+     ..|..+++.++..   ..+. ........+.|+||
T Consensus       203 l~v~dl~~g~~~l~~~-~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpD  281 (751)
T 2xe4_A          203 IEFKRISDPSQTIADK-VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAAD  281 (751)
T ss_dssp             EEEEETTCTTCCCCCC-EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTT
T ss_pred             EEEEECCCCCEeCCcc-ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCC
Confidence            467788777 532110 01113468899999988776654     2577788876642   2222 22334567899999


Q ss_pred             CCEEEEeC---CCCeEEEeeCCCC--ce--EEe-cCCCCCeEEEEECCCCCEEEEecCC
Q psy15612         71 GKWFVSTG---KDNLLNAWRTPYG--AS--IFQ-SKESSSVLSCDISADDKYIVTGSGD  121 (131)
Q Consensus        71 ~~~~~~~~---~~~~i~~w~~~~~--~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~d  121 (131)
                      |++|+..+   ....+.++|+.++  +.  ..+ .........+.|+..+.+++.+..+
T Consensus       282 g~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~  340 (751)
T 2xe4_A          282 TNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEG  340 (751)
T ss_dssp             SSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTT
T ss_pred             CCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCC
Confidence            99887654   2345888898765  33  322 2234445556655444444444443

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.39  E-value=1.1e-05  Score=54.38  Aligned_cols=77  Identities=10%  Similarity=0.056  Sum_probs=50.6

Q ss_pred             CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEE
Q psy15612         40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIV  116 (131)
Q Consensus        40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~  116 (131)
                      +.+..||+.+++..-...+......-.+...+..++.++.|+.++.||.++|+.+  ...+......-+.|..+|+.++
T Consensus       455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv  533 (689)
T 1yiq_A          455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV  533 (689)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence            6688999998885322222222233345556788888999999999999999998  3333333223466677887543

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.37  E-value=7.7e-05  Score=45.51  Aligned_cols=109  Identities=12%  Similarity=0.122  Sum_probs=70.0

Q ss_pred             CeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEcc-CCCEEEEeCC-------------
Q psy15612         20 QIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAA-CGKWFVSTGK-------------   79 (131)
Q Consensus        20 ~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~~~~-------------   79 (131)
                      .+..+++.+ +++ |+.+...+.+..++..++....+..     ....+..+++.+ +|+..++...             
T Consensus        81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~  159 (322)
T 2fp8_A           81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD  159 (322)
T ss_dssp             CEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred             CCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence            578899987 554 5555444558888877554333221     123467899999 9987665432             


Q ss_pred             ----CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612         80 ----DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV  129 (131)
Q Consensus        80 ----~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~  129 (131)
                          .+.+..+|..+++.............++++|+++.++.+ ..++.|.++++
T Consensus       160 ~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~  214 (322)
T 2fp8_A          160 TSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWL  214 (322)
T ss_dssp             HTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEES
T ss_pred             ccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEEC
Confidence                356888888777654222222345679999999866544 55678888875

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.35  E-value=8.2e-05  Score=45.40  Aligned_cols=125  Identities=9%  Similarity=-0.057  Sum_probs=74.6

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCC---eEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPD---KYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      .+|..+++.............++++|+++.|+.+ ...+.|..+++....   ...+....+ +..+++.++|+..++..
T Consensus       169 ~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~  247 (322)
T 2fp8_A          169 KYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS  247 (322)
T ss_dssp             EEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred             EEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence            3454444433222222345678999999876655 456789999987532   222222233 78899999998766554


Q ss_pred             C----------CCeEEEeeCCCCceE-EecCC----CCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 K----------DNLLNAWRTPYGASI-FQSKE----SSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~----------~~~i~~w~~~~~~~~-~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .          .+.+..+|.. ++.+ .....    -..+..+++ .+++++++...++.|..+++.
T Consensus       248 ~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~  312 (322)
T 2fp8_A          248 EELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD  312 (322)
T ss_dssp             EETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred             CcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence            3          3567888874 6655 22211    234556666 356666665567788888763

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.24  E-value=1.3e-07  Score=59.01  Aligned_cols=98  Identities=14%  Similarity=0.061  Sum_probs=53.7

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCCCeE-EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecC-C-CCCe-E
Q psy15612         29 SGEWLAVGMENSNVEVLHALKPDKY-QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-E-SSSV-L  104 (131)
Q Consensus        29 ~~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-~-~~~v-~  104 (131)
                      ++..+++++.++.+..||..+++.. +...  ..+.+..+..++..++.++.|+.++.||..+|+.+.... + ...+ .
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~   85 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA   85 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence            5778899999999999999988863 2222  344444455677778888899999999998887652211 1 0000 0


Q ss_pred             EEEECCCCCEEEEecCCCcEEEEEe
Q psy15612        105 SCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       105 ~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ...+. .+..+++++.++.+..||.
T Consensus        86 sp~~~-~~~~v~~g~~dg~v~a~D~  109 (369)
T 2hz6_A           86 SPCRS-SDGILYMGKKQDIWYVIDL  109 (369)
T ss_dssp             CSCC------CCCCEEEEEEEEECC
T ss_pred             CceEe-cCCEEEEEeCCCEEEEEEC
Confidence            01111 2344566666777877775

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.24  E-value=4.3e-05  Score=47.49  Aligned_cols=120  Identities=12%  Similarity=0.035  Sum_probs=74.3

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec--cccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL--HESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      ..+|.++++.+...... ....+..  ++..++.++.++.+..+|..+++..-...  ..........  .+..++.++.
T Consensus       252 ~~~d~~tG~~~w~~~~~-~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~  326 (376)
T 3q7m_A          252 TALDLRSGQIMWKRELG-SVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDS  326 (376)
T ss_dssp             EEEETTTCCEEEEECCC-CEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECT
T ss_pred             EEEECCCCcEEeeccCC-CCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeC
Confidence            56777788777655332 2333333  46677778888899999999888532221  1111222222  2567788888


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCe-EEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSV-LSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ++.+..+|..+|+.+ ........+ .....  .+..++.++.+|.+..|+
T Consensus       327 ~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          327 EGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             TSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred             CCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence            999999999999987 222212222 11222  245677788889998886

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.21  E-value=0.00031  Score=45.71  Aligned_cols=128  Identities=12%  Similarity=0.130  Sum_probs=79.7

Q ss_pred             CEEEeCCCCceeeeecC----CCCeEEEEE-------CCCCCEEEEEeCCC-------cEEEEeCCC-CCe------EEe
Q psy15612          1 MYLQSVSPGRQLQQHDF----SSQIFSLGY-------CPSGEWLAVGMENS-------NVEVLHALK-PDK------YQL   55 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~~~-------~v~~~~~~~-~~~------~~~   55 (131)
                      |++.|.++++.......    ......++|       ++++..|+.+...+       .+.+++... +..      ..+
T Consensus       164 i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v  243 (496)
T 3kya_A          164 IQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLI  243 (496)
T ss_dssp             EEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEE
T ss_pred             EEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceee
Confidence            45677776666544422    235899999       99999776665543       255665333 121      122


Q ss_pred             eccccceEEEEEccC-CCEEEEeCCCCeEEEeeCC-------CCce--------------EEecCCCCCeEEEEECCCCC
Q psy15612         56 HLHESCVLSLRFAAC-GKWFVSTGKDNLLNAWRTP-------YGAS--------------IFQSKESSSVLSCDISADDK  113 (131)
Q Consensus        56 ~~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~w~~~-------~~~~--------------~~~~~~~~~v~~~~~~~~~~  113 (131)
                      .. -.....++.+|+ +.++++-..++.+..+|+.       ++..              +...+.......++|+|+|+
T Consensus       244 ~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~  322 (496)
T 3kya_A          244 AA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGK  322 (496)
T ss_dssp             EE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSS
T ss_pred             cc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCC
Confidence            22 224567888995 5555566677889999987       5543              12233445678999999999


Q ss_pred             EEEEe-cCCCcEEEEEe
Q psy15612        114 YIVTG-SGDKKATVYEV  129 (131)
Q Consensus       114 ~l~~~-~~d~~i~vw~~  129 (131)
                      .|+.+ ...+.|+.++.
T Consensus       323 ~lYvaD~~~h~I~kid~  339 (496)
T 3kya_A          323 YAYFGVINNHYFMRSDY  339 (496)
T ss_dssp             EEEEEETTTTEEEEEEE
T ss_pred             EEEEEeCCCCEEEEEec
Confidence            65444 45667777654

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.20  E-value=5.7e-05  Score=50.82  Aligned_cols=129  Identities=13%  Similarity=0.067  Sum_probs=79.1

Q ss_pred             EEEeCCCCceeeeec---CC-------CCeEEEEECCCCC---EEEEEeCCCcEEEEeCCCCCeE-Eeeccc--------
Q psy15612          2 YLQSVSPGRQLQQHD---FS-------SQIFSLGYCPSGE---WLAVGMENSNVEVLHALKPDKY-QLHLHE--------   59 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~---~~-------~~v~~~~~~~~~~---~l~~~~~~~~v~~~~~~~~~~~-~~~~~~--------   59 (131)
                      ..+|.++|+.+..+.   |.       .+.....+..+|+   .++.++.++.+.++|..+++.. ......        
T Consensus       273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d  352 (668)
T 1kv9_A          273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD  352 (668)
T ss_dssp             EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred             EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence            457888998887662   21       2233333333565   5788889999999999988853 111000        


Q ss_pred             ---c-ce------------------------EEEEEccCCCEEEEe----------------------------------
Q psy15612         60 ---S-CV------------------------LSLRFAACGKWFVST----------------------------------   77 (131)
Q Consensus        60 ---~-~v------------------------~~~~~~~~~~~~~~~----------------------------------   77 (131)
                         . .+                        ..++++|+...++..                                  
T Consensus       353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p  432 (668)
T 1kv9_A          353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP  432 (668)
T ss_dssp             TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred             cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence               0 00                        125677776655431                                  


Q ss_pred             --CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 --GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 --~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                        ..++.+..||..+++.+.............+...+.+++.++.|+.++.||..
T Consensus       433 ~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~  487 (668)
T 1kv9_A          433 AAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD  487 (668)
T ss_dssp             GGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred             CCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence              12367999999999987322222223333344467788888889999999863

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.19  E-value=9.9e-05  Score=44.81  Aligned_cols=123  Identities=11%  Similarity=0.007  Sum_probs=74.9

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      ..+| .+++..... .....+.++...+++.. ..++.++.+..++...............+..+...+++. +..++.+
T Consensus       198 ~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~  274 (330)
T 3hxj_A          198 YAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYD  274 (330)
T ss_dssp             EEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTT
T ss_pred             EEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCe-EEEecCC
Confidence            4567 566665554 33345777777777754 445566778888754444433333333334455555555 5566778


Q ss_pred             CeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         81 NLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        81 ~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +.+..+|. +++.. ........+.++...+++++ ..++.+|.+.+...
T Consensus       275 ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~  322 (330)
T 3hxj_A          275 GHLYAINP-DGTEKWNFETGSWIIATPVIDENGTI-YFGTRNGKFYALFN  322 (330)
T ss_dssp             CEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCE-EEECTTSCEEEEEC
T ss_pred             CCEEEECC-CCcEEEEEEcCCccccceEEcCCCEE-EEEcCCCeEEEEec
Confidence            88999996 66665 33333455667777777775 45677888877653

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.19  E-value=7.9e-05  Score=49.26  Aligned_cols=128  Identities=9%  Similarity=-0.003  Sum_probs=75.3

Q ss_pred             EEEeCCCCceeeeec---CC-------CCeEEEEECCCCC---EEEEEeCCCcEEEEeCCCCCeEE-eeccc--------
Q psy15612          2 YLQSVSPGRQLQQHD---FS-------SQIFSLGYCPSGE---WLAVGMENSNVEVLHALKPDKYQ-LHLHE--------   59 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~---~~-------~~v~~~~~~~~~~---~l~~~~~~~~v~~~~~~~~~~~~-~~~~~--------   59 (131)
                      ..+|.++|+.+..+.   +.       ....-....++|+   .++.++.++.+..+|..+++..- .....        
T Consensus       275 ~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~  354 (571)
T 2ad6_A          275 WGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKV  354 (571)
T ss_dssp             EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred             EEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccc
Confidence            457888888876652   11       1112222234674   56778889999999998887521 11100        


Q ss_pred             -----cce--------------------------EEEEEccCCCEEEEeC------------------------------
Q psy15612         60 -----SCV--------------------------LSLRFAACGKWFVSTG------------------------------   78 (131)
Q Consensus        60 -----~~v--------------------------~~~~~~~~~~~~~~~~------------------------------   78 (131)
                           .++                          ..++++|+...++...                              
T Consensus       355 d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~  434 (571)
T 2ad6_A          355 DLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPG  434 (571)
T ss_dssp             CTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred             cccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccC
Confidence                 011                          2356788766665542                              


Q ss_pred             -------CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 -------KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 -------~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                             .++.+..||..+++.+........+....+...+..++.++.|+.+..+|.
T Consensus       435 ~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~  492 (571)
T 2ad6_A          435 PNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDN  492 (571)
T ss_dssp             TTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred             ccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEEC
Confidence                   346789999999988722222222222222224566667888899998885

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.19  E-value=0.00014  Score=45.16  Aligned_cols=124  Identities=10%  Similarity=0.070  Sum_probs=70.4

Q ss_pred             CEEEeCCCCceeeeecC----------CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-eeccccceEEEEEcc
Q psy15612          1 MYLQSVSPGRQLQQHDF----------SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-LHLHESCVLSLRFAA   69 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~~~~~~~v~~~~~~~   69 (131)
                      |+.+|.++++.+.....          ...+... ...++..++.++.++.+..+|..+++..- .............. 
T Consensus        65 v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~-  142 (376)
T 3q7m_A           65 VKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS-  142 (376)
T ss_dssp             EEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-
T ss_pred             EEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-
Confidence            45688888888766532          2222221 12245677778888999999999887532 22111111111121 


Q ss_pred             CCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCe------EEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         70 CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV------LSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        70 ~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v------~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                       +..++.++.++.+..+|..+|+.+........+      ......  +..++.+..++.+..+|.
T Consensus       143 -~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~  205 (376)
T 3q7m_A          143 -DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM  205 (376)
T ss_dssp             -TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred             -CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence             446777888999999999999887222211111      111111  344556666677776664

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.16  E-value=0.00023  Score=42.21  Aligned_cols=110  Identities=9%  Similarity=-0.071  Sum_probs=69.2

Q ss_pred             CCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEE-eCCCCeEEEeeCCCCce
Q psy15612         19 SQIFSLGYCPSGEWLAVGME---NSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVS-TGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~---~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~-~~~~~~i~~w~~~~~~~   93 (131)
                      .....++++|++..|+.+..   .+.|..+++.......+. .....+..++++|++..++. -...+.|..++......
T Consensus       122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~  201 (267)
T 1npe_A          122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR  201 (267)
T ss_dssp             SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred             CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence            46789999997666655543   367888888655443332 23346789999998776654 45567899999875444


Q ss_pred             EEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         94 IFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ............++.. .+..+++...++.|..+|.
T Consensus       202 ~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~  236 (267)
T 1npe_A          202 RKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDL  236 (267)
T ss_dssp             EEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred             EEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeC
Confidence            3222233445667664 3444444445677877764

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.11  E-value=0.00011  Score=44.63  Aligned_cols=119  Identities=14%  Similarity=0.130  Sum_probs=70.9

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      ..+|.+ ++..... .....+.++...+++. +..++.++.+..+|.. ++. .........+.++...+++...+..  
T Consensus       120 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--  194 (330)
T 3hxj_A          120 YAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--  194 (330)
T ss_dssp             EEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--
T ss_pred             EEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--
Confidence            455655 5555444 2233345556666666 5556677889999988 553 3333334456667777777755444  


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                       +.+..+| .+++.. ........+.++...+++++.+. +.++.+..+|
T Consensus       195 -~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~-t~~~gl~~~~  241 (330)
T 3hxj_A          195 -DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVT-SLDGHLYAIN  241 (330)
T ss_dssp             -SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEE-ETTTEEEEEC
T ss_pred             -CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEE-cCCCeEEEEC
Confidence             7788899 667666 33334455777777777765443 3444454443

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.08  E-value=7.9e-05  Score=47.58  Aligned_cols=109  Identities=9%  Similarity=0.019  Sum_probs=69.9

Q ss_pred             CeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC-CC----eEEEeeCCCCce
Q psy15612         20 QIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK-DN----LLNAWRTPYGAS   93 (131)
Q Consensus        20 ~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~----~i~~w~~~~~~~   93 (131)
                      ....++++| ++..|+.+...+.|..+|+.+..+..+......+..++++++|+.++.+.. .+    .+..++.. +..
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~  216 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGF  216 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cce
Confidence            457889998 456666665557889999988776665555567889999999996665543 11    23334432 322


Q ss_pred             E--EecCCCCCeEEEEECC-CCCEEEEecCCCcEEEEEe
Q psy15612         94 I--FQSKESSSVLSCDISA-DDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        94 ~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~vw~~  129 (131)
                      .  ........+..++++| ++.++++-..++.|..++.
T Consensus       217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~  255 (430)
T 3tc9_A          217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDF  255 (430)
T ss_dssp             CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred             eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence            1  1111234456788999 6776666656677777764

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.06  E-value=7.7e-05  Score=49.33  Aligned_cols=78  Identities=10%  Similarity=0.027  Sum_probs=45.3

Q ss_pred             CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEE
Q psy15612         39 NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIV  116 (131)
Q Consensus        39 ~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~  116 (131)
                      ++.+..+|+.+++..-.......+....+...+..++.++.++.++.+|.++|+.+  ...+....-.-+.+..+|+.++
T Consensus       443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv  522 (571)
T 2ad6_A          443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI  522 (571)
T ss_dssp             CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence            46788899988875322112222222222334566777889999999999999998  2222211112233446776544

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.03  E-value=0.00056  Score=41.81  Aligned_cols=128  Identities=4%  Similarity=-0.140  Sum_probs=78.6

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCC----CCeEEe-eccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALK----PDKYQL-HLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~----~~~~~~-~~~~~~v~~~~~~~~~~~~   74 (131)
                      |+..|+.+.+....+.....+..++|++.+..|+.+ ..++.|..+++.+    .....+ ...-..+..+++.+.+..+
T Consensus        12 I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~l   91 (316)
T 1ijq_A           12 VRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNI   91 (316)
T ss_dssp             EEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEE
T ss_pred             EEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeE
Confidence            456677766655555555678899999876665554 4567899999876    222222 2222456789998755544


Q ss_pred             -EEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-C-CcEEEEE
Q psy15612         75 -VSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-D-KKATVYE  128 (131)
Q Consensus        75 -~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vw~  128 (131)
                       .+-...+.|.+.+....... ........+..++++|.+..++.+.. . +.|...+
T Consensus        92 y~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~  149 (316)
T 1ijq_A           92 YWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG  149 (316)
T ss_dssp             EEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred             EEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEc
Confidence             45466788999998754443 33334467789999986665544433 2 4565544

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.99  E-value=0.00045  Score=46.38  Aligned_cols=107  Identities=14%  Similarity=0.115  Sum_probs=69.6

Q ss_pred             EEEECC-CCCEEEEEeCCC-----------cEEEEeCCCCCeEE---eec-cccceEEEEEccCCCEEEEeCC-CCeEEE
Q psy15612         23 SLGYCP-SGEWLAVGMENS-----------NVEVLHALKPDKYQ---LHL-HESCVLSLRFAACGKWFVSTGK-DNLLNA   85 (131)
Q Consensus        23 ~~~~~~-~~~~l~~~~~~~-----------~v~~~~~~~~~~~~---~~~-~~~~v~~~~~~~~~~~~~~~~~-~~~i~~   85 (131)
                      ..++.| +++.++.|+.+.           .+.+||..+.+...   +.. +......+++.++++.++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            556666 788888876532           57889998876432   221 2223345677889999888874 457999


Q ss_pred             eeCCCCceEEecC--CCCCeEEEEECCCCCEEEEec-CC-----CcEEEEEe
Q psy15612         86 WRTPYGASIFQSK--ESSSVLSCDISADDKYIVTGS-GD-----KKATVYEV  129 (131)
Q Consensus        86 w~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~vw~~  129 (131)
                      ||..+.+......  ....-..++..+++++++.|+ .+     ..+.+||.
T Consensus       270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~  321 (656)
T 1k3i_A          270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP  321 (656)
T ss_dssp             EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred             ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence            9998877663222  111223455667899888887 34     45778875

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.92  E-value=0.00027  Score=46.88  Aligned_cols=50  Identities=18%  Similarity=0.306  Sum_probs=30.9

Q ss_pred             CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++.+.-||+.+++.+...........-.....+.+++.++.|+.++.+|.
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~  514 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDA  514 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred             cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence            56788999999998722221111111111124566777888999998885

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.88  E-value=0.0012  Score=40.72  Aligned_cols=111  Identities=12%  Similarity=0.103  Sum_probs=76.3

Q ss_pred             CeEEEEE---CCCCCEEEEEeC-------------CCcEEEEeCC---CCCe-EEe--ec-----------cccceEEEE
Q psy15612         20 QIFSLGY---CPSGEWLAVGME-------------NSNVEVLHAL---KPDK-YQL--HL-----------HESCVLSLR   66 (131)
Q Consensus        20 ~v~~~~~---~~~~~~l~~~~~-------------~~~v~~~~~~---~~~~-~~~--~~-----------~~~~v~~~~   66 (131)
                      .+..+.+   .|+++++++...             +..+..+|+.   +++. ...  ..           ......+++
T Consensus        64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva  143 (334)
T 2p9w_A           64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA  143 (334)
T ss_dssp             EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred             eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence            3689999   688777775442             5678999998   5553 221  11           113478999


Q ss_pred             EccCCCEEEEeCCC-CeEEEeeCCCCceE-Ee-cC----CCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         67 FAACGKWFVSTGKD-NLLNAWRTPYGASI-FQ-SK----ESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        67 ~~~~~~~~~~~~~~-~~i~~w~~~~~~~~-~~-~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..++|+..++.+.. +.|..++....... .. ..    .......++++|+|+.|+....++.+..+|+.
T Consensus       144 vD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~  214 (334)
T 2p9w_A          144 QDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS  214 (334)
T ss_dssp             ECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred             ECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence            99999988888877 88888887643232 21 11    12336689999999988777668888888853

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.87  E-value=0.0013  Score=40.82  Aligned_cols=110  Identities=8%  Similarity=-0.154  Sum_probs=69.4

Q ss_pred             CeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEe-CCC-CeEEEeeCCCCceEE
Q psy15612         20 QIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVST-GKD-NLLNAWRTPYGASIF   95 (131)
Q Consensus        20 ~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~-~~~-~~i~~w~~~~~~~~~   95 (131)
                      ....+++.+.+..| ++-...+.|.+.++.......+. ..-..+..+++.|.+..++.+ ... +.|...++.......
T Consensus       117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~  196 (349)
T 3v64_C          117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI  196 (349)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred             CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence            45678887755554 44445678889998766544333 334567899999966655544 334 778888876443332


Q ss_pred             e-cCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612         96 Q-SKESSSVLSCDISADDKYIVTG-SGDKKATVYEV  129 (131)
Q Consensus        96 ~-~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~  129 (131)
                      . ...-.....++++|++..|+.+ ...+.|..+|+
T Consensus       197 ~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~  232 (349)
T 3v64_C          197 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL  232 (349)
T ss_dssp             SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence            2 2234567899999876666544 44566776653

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.85  E-value=0.00028  Score=46.81  Aligned_cols=77  Identities=10%  Similarity=0.144  Sum_probs=44.8

Q ss_pred             CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCe--EEEEECCCCCEE
Q psy15612         39 NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV--LSCDISADDKYI  115 (131)
Q Consensus        39 ~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l  115 (131)
                      .+.+..||+.+++..-..........-.....+..++.++.|+.++.+|.++|+.+.....+..+  .-+.+..+|+.+
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY  543 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY  543 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence            46788899988875211111111111111223666777899999999999999998222222222  225555677744

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.84  E-value=0.0012  Score=39.31  Aligned_cols=113  Identities=12%  Similarity=0.098  Sum_probs=76.9

Q ss_pred             cCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCe-EEee-ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612         16 DFSSQIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDK-YQLH-LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      +-...+..++++|++..|+ +...++.|...|.. +++ ..+. .-......+++.+++.++++.-.++.+.++++....
T Consensus        24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~  102 (255)
T 3qqz_A           24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS  102 (255)
T ss_dssp             TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred             CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence            4446799999999876554 56778888888988 553 4442 223567889999988877776677888888875433


Q ss_pred             e---E--Ee-----cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         93 S---I--FQ-----SKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        93 ~---~--~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .   .  ..     ...+.....++++|.++.|.++.+.....+|.+
T Consensus       103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~  149 (255)
T 3qqz_A          103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV  149 (255)
T ss_dssp             CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred             eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence            2   1  11     123445689999999877776665445555554

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.83  E-value=0.0016  Score=40.43  Aligned_cols=125  Identities=4%  Similarity=-0.110  Sum_probs=76.5

Q ss_pred             EeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEE-EEeCCC
Q psy15612          4 QSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWF-VSTGKD   80 (131)
Q Consensus         4 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~~~   80 (131)
                      .++...+..........+..++|++.+..|+.. ...+.|..+++.+.....+. .....+..+++.+.+..+ .+-...
T Consensus        58 i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~  137 (349)
T 3v64_C           58 VLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT  137 (349)
T ss_dssp             ECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT
T ss_pred             EeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCC
Confidence            344333333333444557889999766666554 45677888898876654432 223456788998755544 455567


Q ss_pred             CeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEec-CC-CcEEEEE
Q psy15612         81 NLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGS-GD-KKATVYE  128 (131)
Q Consensus        81 ~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~vw~  128 (131)
                      +.|.+.++...... .....-.....++++|.+..++.+. .+ +.|...+
T Consensus       138 ~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~  188 (349)
T 3v64_C          138 SRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS  188 (349)
T ss_dssp             TEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred             CeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence            78999998754433 3333446678999998666555443 33 5565554

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.78  E-value=0.002  Score=40.18  Aligned_cols=125  Identities=13%  Similarity=0.198  Sum_probs=79.5

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCC----CCE--E-EEEeC---CCcEEEEeC--CCCCeEEeec------cc-cc
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPS----GEW--L-AVGME---NSNVEVLHA--LKPDKYQLHL------HE-SC   61 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l-~~~~~---~~~v~~~~~--~~~~~~~~~~------~~-~~   61 (131)
                      |.+||+ +|+.+..+.. +++..+..-|+    |+.  + +....   +.+|.+|++  .+..+..+..      .. ..
T Consensus        52 L~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~  129 (355)
T 3amr_A           52 LVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINE  129 (355)
T ss_dssp             EEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSS
T ss_pred             EEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCC
Confidence            468998 7888887743 56666666653    332  2 33333   578999966  4555544421      11 45


Q ss_pred             eEEEEE--ccC-CC-EEEEeCCCCeEEEeeCC---CC----ceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         62 VLSLRF--AAC-GK-WFVSTGKDNLLNAWRTP---YG----ASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        62 v~~~~~--~~~-~~-~~~~~~~~~~i~~w~~~---~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +..+++  +|. ++ +++....++.+..|++.   ++    +.+.....++.+..+...+....|+.+-++.-  ||.+
T Consensus       130 pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G--Iw~~  206 (355)
T 3amr_A          130 VYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA--IWKF  206 (355)
T ss_dssp             CCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE--EEEE
T ss_pred             eeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce--EEEE
Confidence            677777  674 44 57777888998888773   33    22233445677888888888888888877744  5543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.77  E-value=0.0017  Score=41.58  Aligned_cols=105  Identities=11%  Similarity=0.128  Sum_probs=72.6

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-------------eEEeec------cccceEEEEEccC---CCEEEEe
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-------------KYQLHL------HESCVLSLRFAAC---GKWFVST   77 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-------------~~~~~~------~~~~v~~~~~~~~---~~~~~~~   77 (131)
                      .+..+..+|+|.+|+..+. ..|.+..+..+.             +..+.-      ....|..+.|+|-   +..+++-
T Consensus        67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL  145 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL  145 (452)
T ss_dssp             TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred             ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence            5778999999999998755 478888886221             111111      2467999999994   6688888


Q ss_pred             CCCCeEEEeeCCCCce--EEec---------CCCCCeEEEEECCCCCEEEEec--CCCcEE
Q psy15612         78 GKDNLLNAWRTPYGAS--IFQS---------KESSSVLSCDISADDKYIVTGS--GDKKAT  125 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~--~~~~---------~~~~~v~~~~~~~~~~~l~~~~--~d~~i~  125 (131)
                      ..|+.|++||+.....  ..+.         .....+.+++|.+++-.|...+  .+|.|.
T Consensus       146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY  206 (452)
T 3pbp_A          146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF  206 (452)
T ss_dssp             ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred             ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence            8999999999985321  1111         1226688999999877666644  666653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.75  E-value=0.0024  Score=40.25  Aligned_cols=126  Identities=3%  Similarity=-0.141  Sum_probs=77.1

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEE-EEeCC
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWF-VSTGK   79 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~~   79 (131)
                      ..++...+..........+..++|++.+..|+.. ...+.|..+++.+.....+. .....+..+++.+.+..+ .+-..
T Consensus       100 ~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~  179 (386)
T 3v65_B          100 QVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG  179 (386)
T ss_dssp             EECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT
T ss_pred             eeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC
Confidence            3444444333333444568889999766655544 45677888998877654432 223356778888755544 45555


Q ss_pred             CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-C-CcEEEEE
Q psy15612         80 DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-D-KKATVYE  128 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vw~  128 (131)
                      .+.|.+.++...... .....-..+..++++|.+..|+.+.. + +.|...+
T Consensus       180 ~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~  231 (386)
T 3v65_B          180 TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS  231 (386)
T ss_dssp             TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred             CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEe
Confidence            678888888754433 33333466789999987666554433 3 4555544

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.75  E-value=0.0021  Score=39.33  Aligned_cols=111  Identities=7%  Similarity=-0.160  Sum_probs=70.6

Q ss_pred             CCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCC-C-CeEEEeeCCCCceE
Q psy15612         19 SQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGK-D-NLLNAWRTPYGASI   94 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~-~-~~i~~w~~~~~~~~   94 (131)
                      ..+..+++.+.+..| ++-...+.|.++++.......+. .....+..+++.|.+..++.+.. . +.|...++......
T Consensus        77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~  156 (316)
T 1ijq_A           77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  156 (316)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred             CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE
Confidence            345678887655544 44456778999998766554433 23456789999996665554433 2 67888887643333


Q ss_pred             -EecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612         95 -FQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV  129 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~  129 (131)
                       .....-.....++++|++..|+.+ ...+.|..+|+
T Consensus       157 ~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~  193 (316)
T 1ijq_A          157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV  193 (316)
T ss_dssp             EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence             222334668899999877666544 44567777664

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.74  E-value=0.0026  Score=40.30  Aligned_cols=127  Identities=4%  Similarity=-0.147  Sum_probs=76.4

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCC----CeEEe-eccccceEEEEEccCCC-EE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALKP----DKYQL-HLHESCVLSLRFAACGK-WF   74 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~----~~~~~-~~~~~~v~~~~~~~~~~-~~   74 (131)
                      +..|+...+..........+..++|++.+..|+... ..+.|..+++.+.    ....+ ......+..+++.+.+. ..
T Consensus        95 ~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY  174 (400)
T 3p5b_L           95 RKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIY  174 (400)
T ss_dssp             EEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred             EEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceE
Confidence            344554444333344556788999998766665554 4677888888652    22232 22445677899987544 44


Q ss_pred             EEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecC--CCcEEEEE
Q psy15612         75 VSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSG--DKKATVYE  128 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~vw~  128 (131)
                      .+-...+.|.+.++...... ........+..++++|.+..|+.+..  .+.|...+
T Consensus       175 ~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~  231 (400)
T 3p5b_L          175 WTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG  231 (400)
T ss_dssp             EEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEE
T ss_pred             EEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEe
Confidence            45566778999998755544 33334456889999987665554432  24555544

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.71  E-value=0.0019  Score=43.16  Aligned_cols=51  Identities=12%  Similarity=0.025  Sum_probs=33.1

Q ss_pred             EEEeCCCCceeeeec---CCC-------CeEEEEEC-CCC---CEEEEEeCCCcEEEEeCCCCCe
Q psy15612          2 YLQSVSPGRQLQQHD---FSS-------QIFSLGYC-PSG---EWLAVGMENSNVEVLHALKPDK   52 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~---~~~-------~v~~~~~~-~~~---~~l~~~~~~~~v~~~~~~~~~~   52 (131)
                      ..+|.++|+.+..+.   |..       ...-+... .+|   ..++.++.++.+.++|..+++.
T Consensus       281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~  345 (599)
T 1w6s_A          281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL  345 (599)
T ss_dssp             EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred             EEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence            457888888876652   211       11222322 466   4567788999999999988875

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.67  E-value=0.0023  Score=43.00  Aligned_cols=99  Identities=12%  Similarity=0.039  Sum_probs=60.3

Q ss_pred             EEEEEC-CCCCEEEEEeCCC-----------cEEEEeCCCCCeEEee---cccc-ceEEEEEccCCCEEEEeCCC-----
Q psy15612         22 FSLGYC-PSGEWLAVGMENS-----------NVEVLHALKPDKYQLH---LHES-CVLSLRFAACGKWFVSTGKD-----   80 (131)
Q Consensus        22 ~~~~~~-~~~~~l~~~~~~~-----------~v~~~~~~~~~~~~~~---~~~~-~v~~~~~~~~~~~~~~~~~~-----   80 (131)
                      .++.+. .++++++.|+.+.           .+.+||..+.......   .... .-.++...|+++.++.++.+     
T Consensus       402 ~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~  481 (656)
T 1k3i_A          402 NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF  481 (656)
T ss_dssp             EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred             ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc
Confidence            344443 3677777776432           5777887776654332   1222 22345667899999888754     


Q ss_pred             ------CeEEEeeCCCCceEEecC---CCCCeEEEEECCCCCEEEEecC
Q psy15612         81 ------NLLNAWRTPYGASIFQSK---ESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        81 ------~~i~~w~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                            ..+.+||..+.+......   ....-....+.|+++.++.|+.
T Consensus       482 ~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          482 EDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence                  458899998777653221   1222234456789999988875

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.61  E-value=0.0036  Score=38.40  Aligned_cols=110  Identities=9%  Similarity=-0.068  Sum_probs=69.2

Q ss_pred             CeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeC--CCCeEEEeeCCCCceE-
Q psy15612         20 QIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTG--KDNLLNAWRTPYGASI-   94 (131)
Q Consensus        20 ~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~--~~~~i~~w~~~~~~~~-   94 (131)
                      ....+++.+.+..| ++-...+.|.++++.+.....+. .....+..+++.|.+..++.+.  ..+.|...++...... 
T Consensus        80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~  159 (318)
T 3sov_A           80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI  159 (318)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred             CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence            34567777655444 44445678899998766544433 3445678999998766555544  3577888887643333 


Q ss_pred             EecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612         95 FQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV  129 (131)
Q Consensus        95 ~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~  129 (131)
                      .....-.....++++|++..|+.+ +..+.|..+|+
T Consensus       160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~  195 (318)
T 3sov_A          160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL  195 (318)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence            222334567899999976666544 44566776664

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.56  E-value=0.00072  Score=39.45  Aligned_cols=99  Identities=13%  Similarity=0.013  Sum_probs=62.9

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-------EEeec-cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-------YQLHL-HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-------~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      .+..++|+|+|.+.+.  .++.+.-.+..+...       ..+-. --.....+.|.|+|.+.++  .|+.|+-++..+.
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            5679999999987666  667777666644221       11211 0112468889999987777  5688887876432


Q ss_pred             ceE------EecC--CCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612         92 ASI------FQSK--ESSSVLSCDISADDKYIVTGSGDKKA  124 (131)
Q Consensus        92 ~~~------~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i  124 (131)
                      ...      ...+  -=..+..+.+.|+|.+.+..  |+.+
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l  156 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF  156 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred             CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence            221      1111  11457899999999988776  5553

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.52  E-value=0.0057  Score=38.52  Aligned_cols=109  Identities=10%  Similarity=-0.007  Sum_probs=70.2

Q ss_pred             CCeEEEEECCCCCEEEEEeC-C-CcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCCceE
Q psy15612         19 SQIFSLGYCPSGEWLAVGME-N-SNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYGASI   94 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~-~-~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~~~   94 (131)
                      .....++++|.+..|+.+.. . +.|..+++.......+. ..-.....++++|++..|+.+ +..+.|..+++......
T Consensus       202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~  281 (386)
T 3v65_B          202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK  281 (386)
T ss_dssp             SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE
T ss_pred             CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE
Confidence            56788999987766655543 3 67888888766554432 233457899999876665544 55678999998644333


Q ss_pred             -EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         95 -FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                       ........+..+++ ..+.++.+-...+.|..+|
T Consensus       282 ~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~  315 (386)
T 3v65_B          282 AVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN  315 (386)
T ss_dssp             EEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred             EEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence             33333456777888 3445555555566676665

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.50  E-value=0.0064  Score=38.53  Aligned_cols=111  Identities=6%  Similarity=-0.156  Sum_probs=71.9

Q ss_pred             CCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeC--CCCeEEEeeCCCCceE
Q psy15612         19 SQIFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTG--KDNLLNAWRTPYGASI   94 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~--~~~~i~~w~~~~~~~~   94 (131)
                      .....+++.+.+..| ++-...+.|.+.++.+.....+. ..-..+..+++.|.+..++.+.  ..+.|...++......
T Consensus       159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~  238 (400)
T 3p5b_L          159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  238 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred             CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence            456788888754444 44455678888998877654443 2344578999999766655443  2467888888644433


Q ss_pred             -EecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612         95 -FQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEV  129 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~  129 (131)
                       .....-.....+++++++..|+.+. ..+.|...|+
T Consensus       239 ~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~  275 (400)
T 3p5b_L          239 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV  275 (400)
T ss_dssp             EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeC
Confidence             3233346788999998777666553 3556666653

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.50  E-value=0.0026  Score=42.53  Aligned_cols=77  Identities=13%  Similarity=0.111  Sum_probs=43.5

Q ss_pred             CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEE
Q psy15612         39 NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYI  115 (131)
Q Consensus        39 ~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l  115 (131)
                      .+.+.-||+.+++..-..........-.+...+..++.++.|+.++.+|.++|+.+  ...+......-+.+..+|+.+
T Consensus       452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qy  530 (599)
T 1w6s_A          452 LGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQY  530 (599)
T ss_dssp             CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             cCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEE
Confidence            35678888888775221111111111112224666777889999999999999998  333222222224455677643

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.49  E-value=0.007  Score=38.84  Aligned_cols=101  Identities=16%  Similarity=0.225  Sum_probs=65.5

Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCCCe-EEeecc----ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--------
Q psy15612         28 PSGEWLAVGMENSNVEVLHALKPDK-YQLHLH----ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--------   94 (131)
Q Consensus        28 ~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--------   94 (131)
                      .+|..++.+- ++.++.-++..... +.+...    -..+..+..+|+|++++..+ +..+.+..+..+...        
T Consensus        30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~  107 (452)
T 3pbp_A           30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD  107 (452)
T ss_dssp             TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred             cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence            3455555543 35677767663332 222222    22578899999999999886 446777766532211        


Q ss_pred             ------EecC-----CCCCeEEEEECCC---CCEEEEecCCCcEEEEEee
Q psy15612         95 ------FQSK-----ESSSVLSCDISAD---DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 ------~~~~-----~~~~v~~~~~~~~---~~~l~~~~~d~~i~vw~~~  130 (131)
                            +..+     ....|..+.|+|-   +..|++...|+.|++||+.
T Consensus       108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~  157 (452)
T 3pbp_A          108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDIL  157 (452)
T ss_dssp             TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETT
T ss_pred             ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcc
Confidence                  1111     3577999999995   4578888889999999974

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.49  E-value=0.0071  Score=38.78  Aligned_cols=128  Identities=8%  Similarity=0.040  Sum_probs=77.1

Q ss_pred             EEEeCCCCceeee-e--cCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCC--CCCe---EEeecc--------------
Q psy15612          2 YLQSVSPGRQLQQ-H--DFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHAL--KPDK---YQLHLH--------------   58 (131)
Q Consensus         2 ~iwd~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~--~~~~---~~~~~~--------------   58 (131)
                      +.+|..+++.... .  ........++++|+++.|+.+ ...+.|..++..  ++..   ..+.+.              
T Consensus       253 ~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a  332 (433)
T 4hw6_A          253 SSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGA  332 (433)
T ss_dssp             EEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGS
T ss_pred             EEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccce
Confidence            4455555554222 2  222234569999999965554 456778887764  2221   111111              


Q ss_pred             -ccceEEEEE---------ccCCCEEEEeCCCCeEEEeeCCCCceEEecCC------------------CCCeEEEEEC-
Q psy15612         59 -ESCVLSLRF---------AACGKWFVSTGKDNLLNAWRTPYGASIFQSKE------------------SSSVLSCDIS-  109 (131)
Q Consensus        59 -~~~v~~~~~---------~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~------------------~~~v~~~~~~-  109 (131)
                       -..+..+++         .++|...++-...+.|+.++. +|......+.                  -..+..++++ 
T Consensus       333 ~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~  411 (433)
T 4hw6_A          333 RLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDM  411 (433)
T ss_dssp             BCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEET
T ss_pred             EEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEEC
Confidence             123667888         667777666677788999985 5654422211                  1347889999 


Q ss_pred             CCCCEEEEecCCCcEEEEEee
Q psy15612        110 ADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus       110 ~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++++++++-..++.|+..++.
T Consensus       412 ~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          412 KRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             TTTEEEEEEGGGTEEEEEEEC
T ss_pred             CCCEEEEEeCCCCEEEEEecC
Confidence            677766666667788888763

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.49  E-value=0.001  Score=45.17  Aligned_cols=109  Identities=7%  Similarity=-0.142  Sum_probs=65.6

Q ss_pred             eEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEEEeCC--CCeEEEeeCCCCceE-E
Q psy15612         21 IFSLGYCPSGEWL-AVGMENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFVSTGK--DNLLNAWRTPYGASI-F   95 (131)
Q Consensus        21 v~~~~~~~~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~-~   95 (131)
                      ...+++.+.+..| ++-...+.|.++++.+.....+.. ....+..+++.|.+..|+.+..  .+.|..+++...... .
T Consensus       455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l  534 (699)
T 1n7d_A          455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL  534 (699)
T ss_dssp             CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred             cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence            4567777544444 444456789999988766544432 2345678899987665555443  267877777533322 2


Q ss_pred             ecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         96 QSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        96 ~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      ....-.....++++|++..|+ +-...+.|.++++
T Consensus       535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~  569 (699)
T 1n7d_A          535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV  569 (699)
T ss_dssp             SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred             EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEcc
Confidence            222334567899998765554 4444566776654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.49  E-value=0.0054  Score=40.08  Aligned_cols=110  Identities=7%  Similarity=-0.017  Sum_probs=67.6

Q ss_pred             CeEEEEECCC-CCEE-EEEeCCCcEEEEeCCCCCeEEeecc----ccceEEEEE-------ccCCCEEEEeCCCC-----
Q psy15612         20 QIFSLGYCPS-GEWL-AVGMENSNVEVLHALKPDKYQLHLH----ESCVLSLRF-------AACGKWFVSTGKDN-----   81 (131)
Q Consensus        20 ~v~~~~~~~~-~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~~~~~~~~~-----   81 (131)
                      ....|+++|. +..| ++....+.+++.|+..+.+..+...    ...+..++|       +++|..++.+...+     
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            4678999983 4444 4444446788899988887654322    235889999       99999766665443     


Q ss_pred             --eEEEeeCCC-CceE-----EecCCCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612         82 --LLNAWRTPY-GASI-----FQSKESSSVLSCDISAD-DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        82 --~i~~w~~~~-~~~~-----~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~  129 (131)
                        .+.+++... +...     ...........++++|+ +.++++-..++.|..+|+
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~  276 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDL  276 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECH
T ss_pred             CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEec
Confidence              255665332 2221     01111234457788995 555556666777888775

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.45  E-value=0.012  Score=40.66  Aligned_cols=114  Identities=4%  Similarity=-0.140  Sum_probs=69.0

Q ss_pred             ecCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCC----CeEE-eeccccceEEEEEccCCCEEE-EeCCCCeEEEee
Q psy15612         15 HDFSSQIFSLGYCPSGEWLAV-GMENSNVEVLHALKP----DKYQ-LHLHESCVLSLRFAACGKWFV-STGKDNLLNAWR   87 (131)
Q Consensus        15 ~~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~~~~----~~~~-~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~   87 (131)
                      ......+..+++++.+..|+. -...+.|..+++...    .... +......+..+++.+.+..|+ +-...+.|.+.+
T Consensus       420 ~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~  499 (791)
T 3m0c_C          420 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD  499 (791)
T ss_dssp             ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEe
Confidence            344456788999886555544 444567888888653    2222 222345567899988776555 445677899999


Q ss_pred             CCCCceE-EecCCCCCeEEEEECCCCCEEEEecC-C-CcEEEEE
Q psy15612         88 TPYGASI-FQSKESSSVLSCDISADDKYIVTGSG-D-KKATVYE  128 (131)
Q Consensus        88 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vw~  128 (131)
                      +...... ........+..++++|.+..|+.+.. + +.|.+.+
T Consensus       500 ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~  543 (791)
T 3m0c_C          500 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG  543 (791)
T ss_dssp             TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred             CCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence            8755544 33334456889999997665554432 2 4455444

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.45  E-value=0.012  Score=40.46  Aligned_cols=107  Identities=10%  Similarity=0.100  Sum_probs=74.8

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~   93 (131)
                      ..|.++...+++..|..|..++-+..++..+++...+..     ....|.++...++|+..+...  +.+..|+..+++.
T Consensus       406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~  483 (795)
T 4a2l_A          406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSF  483 (795)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEE
T ss_pred             ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeE
Confidence            468888888888856667776679999998877654432     235688898888888666554  4588899887766


Q ss_pred             EEec-------CCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         94 IFQS-------KESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        94 ~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ....       .....|.++...++|++.+.+. + -+..||.
T Consensus       484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~  524 (795)
T 4a2l_A          484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQ  524 (795)
T ss_dssp             EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEE
T ss_pred             EEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeC
Confidence            5221       1236788999999888665554 3 4666664

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.38  E-value=0.0088  Score=37.22  Aligned_cols=99  Identities=14%  Similarity=0.109  Sum_probs=61.1

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee------ccccceEEEEEccC---CCEEEEeCC-C-----Ce
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH------LHESCVLSLRFAAC---GKWFVSTGK-D-----NL   82 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~~~~~~~-~-----~~   82 (131)
                      -.....++|.|+|+++++ ...+.|.+++  .+....+.      ........++++|+   +..++.+.. .     +.
T Consensus        30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~  106 (352)
T 2ism_A           30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ  106 (352)
T ss_dssp             CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred             CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence            456789999999985554 5668899988  33322111      12356889999998   555554432 2     56


Q ss_pred             EEEeeCCCCc-----eEEe-cC----CCCCeEEEEECCCCCEEEEec
Q psy15612         83 LNAWRTPYGA-----SIFQ-SK----ESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        83 i~~w~~~~~~-----~~~~-~~----~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      |..++...+.     .+.. ..    .......++|.|+|.+.++.+
T Consensus       107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A          107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred             EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence            7778776432     1111 11    123446899999998666643

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.33  E-value=0.0007  Score=45.93  Aligned_cols=125  Identities=4%  Similarity=-0.163  Sum_probs=69.0

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCC----CCeEE-eeccccceEEEEEccCCCEEE-
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALK----PDKYQ-LHLHESCVLSLRFAACGKWFV-   75 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~----~~~~~-~~~~~~~v~~~~~~~~~~~~~-   75 (131)
                      ..++.+.+....+.....+..++|++.+..|+.+. ..+.|..+++.+    ..... +......+..+++.+.+..|+ 
T Consensus       390 ~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~  469 (699)
T 1n7d_A          390 KMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYW  469 (699)
T ss_dssp             EECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEE
T ss_pred             EEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEE
Confidence            34444444443333344567788988776666553 456788888875    22212 111223455778875444444 


Q ss_pred             EeCCCCeEEEeeCCCCceEEec-CCCCCeEEEEECCCCCEEEEecC-C-CcEEEE
Q psy15612         76 STGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISADDKYIVTGSG-D-KKATVY  127 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~vw  127 (131)
                      +-...+.|.++++.......+. ........++++|.+.+|+.+.. . +.|.+.
T Consensus       470 tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~  524 (699)
T 1n7d_A          470 TDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG  524 (699)
T ss_dssp             CCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBC
T ss_pred             EeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEE
Confidence            4455678999998755444322 22345677888886555544332 2 445443

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.30  E-value=0.011  Score=36.91  Aligned_cols=110  Identities=14%  Similarity=0.212  Sum_probs=72.0

Q ss_pred             CCeEEEEE--CCC-CC-EEEEEeCCCcEEEEeCC---CCCe-----EEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612         19 SQIFSLGY--CPS-GE-WLAVGMENSNVEVLHAL---KPDK-----YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW   86 (131)
Q Consensus        19 ~~v~~~~~--~~~-~~-~l~~~~~~~~v~~~~~~---~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w   86 (131)
                      ..++.+++  +|. ++ +++....++.+..|++.   .+..     +++. -.+.+..+...+....++.+-++..|..+
T Consensus       128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~  206 (355)
T 3amr_A          128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKF  206 (355)
T ss_dssp             SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred             CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCCCCeEEEecccceEEEE
Confidence            45666777  774 44 56777888999998883   2221     3332 34578888898888888889888777777


Q ss_pred             eCC-----CCceEEecCC---CCCeEEEEE--CCCCC-EEEEec-CCCcEEEEEe
Q psy15612         87 RTP-----YGASIFQSKE---SSSVLSCDI--SADDK-YIVTGS-GDKKATVYEV  129 (131)
Q Consensus        87 ~~~-----~~~~~~~~~~---~~~v~~~~~--~~~~~-~l~~~~-~d~~i~vw~~  129 (131)
                      +.+     +++.+...+.   ...+..+++  .++++ ++++++ .+.++.+||.
T Consensus       207 da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr  261 (355)
T 3amr_A          207 SAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR  261 (355)
T ss_dssp             ECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred             eCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence            754     2333322222   246788887  45555 565555 5678999986

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.27  E-value=0.012  Score=36.68  Aligned_cols=104  Identities=13%  Similarity=0.095  Sum_probs=64.3

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-------ccccceEEEEEccC---CCEEEEe---CCCCe
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-------LHESCVLSLRFAAC---GKWFVST---GKDNL   82 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~~~~~---~~~~~   82 (131)
                      ..-.....++|.|+|.++++.-..+.|.+++...+....+.       ........++++|+   ...++..   ..++.
T Consensus        29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~  108 (347)
T 3das_A           29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR  108 (347)
T ss_dssp             CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred             cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence            44466889999999987766654889999987655543221       23456789999995   3444332   23455


Q ss_pred             EEEeeCCCC----------ceEEe-c--CCCCCeEEEEECCCCCEEEEec
Q psy15612         83 LNAWRTPYG----------ASIFQ-S--KESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        83 i~~w~~~~~----------~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      |.-|....+          +.+.. .  ........+.|.|+|.+.++.+
T Consensus       109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G  158 (347)
T 3das_A          109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG  158 (347)
T ss_dssp             EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred             EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence            665655431          11111 1  1223456799999998777654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.22  E-value=0.014  Score=36.38  Aligned_cols=100  Identities=11%  Similarity=0.060  Sum_probs=60.7

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee------ccccceEEEEEccC---CCEEEEeCC----C---
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH------LHESCVLSLRFAAC---GKWFVSTGK----D---   80 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~~~~~~~----~---   80 (131)
                      .-.....++|.|+|++++ +...+.|.+++.. +. ..+.      ........++++|+   +..++.+..    +   
T Consensus        27 ~l~~P~~ia~~pdG~l~V-~e~~g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~  103 (354)
T 3a9g_A           27 DLEVPWSIAPLGGGRYLV-TERPGRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI  103 (354)
T ss_dssp             SCSCEEEEEEEETTEEEE-EETTTEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred             CCCCCeEEEEcCCCeEEE-EeCCCEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence            345678999999998554 4566889988743 33 2221      12346789999997   444444322    2   


Q ss_pred             -CeEEEeeCCCC------ce-EE--ec-CCCCCeEEEEECCCCCEEEEec
Q psy15612         81 -NLLNAWRTPYG------AS-IF--QS-KESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        81 -~~i~~w~~~~~------~~-~~--~~-~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                       +.|..++....      .. +.  .. ........++|.|+|.++++.+
T Consensus       104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G  153 (354)
T 3a9g_A          104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG  153 (354)
T ss_dssp             EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred             ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence             56777776543      11 11  11 1123356799999998776643

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.20  E-value=0.015  Score=36.10  Aligned_cols=74  Identities=8%  Similarity=0.025  Sum_probs=55.2

Q ss_pred             CeEEEEECCCCCEEEEEeCC-CcEEEEeCCCCCeEEeec------cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCc
Q psy15612         20 QIFSLGYCPSGEWLAVGMEN-SNVEVLHALKPDKYQLHL------HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGA   92 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~-~~v~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~   92 (131)
                      ....++..++|+..++++.. +.|...+........+..      .......++++|+|+.++.....+.+..+|+.+..
T Consensus       138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv  217 (334)
T 2p9w_A          138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY  217 (334)
T ss_dssp             EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS
T ss_pred             CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCc
Confidence            48899999999999988887 888877877654332211      11235689999999988887669999999988544


Q ss_pred             e
Q psy15612         93 S   93 (131)
Q Consensus        93 ~   93 (131)
                      .
T Consensus       218 ~  218 (334)
T 2p9w_A          218 A  218 (334)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.19  E-value=0.013  Score=39.72  Aligned_cols=55  Identities=7%  Similarity=0.041  Sum_probs=38.5

Q ss_pred             CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +.|..||+.+++..-............+...+..++.++.++.++.||..+|+.+
T Consensus       438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l  492 (668)
T 1kv9_A          438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL  492 (668)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence            6788899988875321112222223334446778888899999999999999998

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.14  E-value=0.018  Score=36.05  Aligned_cols=99  Identities=8%  Similarity=-0.049  Sum_probs=64.7

Q ss_pred             CCeEEEEECCCCCEEEEEeC-----------------CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCC
Q psy15612         19 SQIFSLGYCPSGEWLAVGME-----------------NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKD   80 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~   80 (131)
                      ...+.+.+.++|.+.++...                 .+.+..++.  ++...+...-.....++|+||++.++.+ +..
T Consensus       165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~  242 (355)
T 3sre_A          165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLA  242 (355)
T ss_dssp             SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGG
T ss_pred             CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCC
Confidence            45789999999987776531                 234555554  3443333334567899999999887765 557


Q ss_pred             CeEEEeeCCC-CceE--EecCCCCCeEEEEECC-CCCEEEEec
Q psy15612         81 NLLNAWRTPY-GASI--FQSKESSSVLSCDISA-DDKYIVTGS  119 (131)
Q Consensus        81 ~~i~~w~~~~-~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~  119 (131)
                      +.|..|++.. ++..  ......+.+-.+++.+ +|++.+++.
T Consensus       243 ~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~  285 (355)
T 3sre_A          243 HKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH  285 (355)
T ss_dssp             TEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred             CeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence            8899998863 4332  1123356778889998 588766543

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.09  E-value=0.017  Score=35.00  Aligned_cols=124  Identities=7%  Similarity=0.022  Sum_probs=69.5

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCeEEeec--cccceEEEEEccCCCEEEEeC
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS--NVEVLHALKPDKYQLHL--HESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      .+|... +..........+..+++.++++++++.....  .+..++..+++...+..  .......++..+++..+++-.
T Consensus        57 ~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~  135 (306)
T 2p4o_A           57 SITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS  135 (306)
T ss_dssp             EECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET
T ss_pred             EECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC
Confidence            344432 3333334445688899999999665543322  46667777776543322  122334455555554455555


Q ss_pred             CCCeEEEeeCCCCceE-E-e-------c--CCCCCeEEEEECCCCCEEEE-ecCCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASI-F-Q-------S--KESSSVLSCDISADDKYIVT-GSGDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~-~-------~--~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw~~  129 (131)
                      ..+.++.+|..+++.. . .       .  ..-.....+  +|+++.++. -...+.|..+++
T Consensus       136 ~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~  196 (306)
T 2p4o_A          136 YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPV  196 (306)
T ss_dssp             TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEB
T ss_pred             CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEe
Confidence            6788999998765321 1 1       0  111234445  778776644 445678888875

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=97.09  E-value=0.029  Score=37.48  Aligned_cols=71  Identities=13%  Similarity=0.102  Sum_probs=52.8

Q ss_pred             ccceEEEEEccCCCEEEEeCC-CCeEEEeeCCC------Cce-------EEecCCCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612         59 ESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPY------GAS-------IFQSKESSSVLSCDISADDKYIVTGSGDKKA  124 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~------~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  124 (131)
                      ...+..+..+|||++++.++. +.++.++|...      .+.       ......+-...+.+|.++|+-..+...|.+|
T Consensus       322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv  401 (638)
T 3sbq_A          322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV  401 (638)
T ss_dssp             SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred             CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence            345678999999999876654 67899998763      111       1233356778899999999766777789999


Q ss_pred             EEEEe
Q psy15612        125 TVYEV  129 (131)
Q Consensus       125 ~vw~~  129 (131)
                      .-|++
T Consensus       402 vkWni  406 (638)
T 3sbq_A          402 VKWNM  406 (638)
T ss_dssp             EEEEH
T ss_pred             EEEec
Confidence            99986

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=97.03  E-value=0.028  Score=36.38  Aligned_cols=103  Identities=9%  Similarity=0.090  Sum_probs=61.8

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee---c------cccceEEEEEccC---CCEEEEeCC-----
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH---L------HESCVLSLRFAAC---GKWFVSTGK-----   79 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~---~------~~~~v~~~~~~~~---~~~~~~~~~-----   79 (131)
                      .-.....|+|.|+|+++++....+.|.+++...+....+.   .      .......++|+|+   +..|+.+..     
T Consensus        25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~  104 (454)
T 1cru_A           25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK  104 (454)
T ss_dssp             CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred             CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence            3456789999999997776544446888876555432221   1      2345679999995   555544321     


Q ss_pred             --------CCeEEEeeCCCC--c-----eEEe-c--CCCCCeEEEEECCCCCEEEEec
Q psy15612         80 --------DNLLNAWRTPYG--A-----SIFQ-S--KESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        80 --------~~~i~~w~~~~~--~-----~~~~-~--~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                              ...|.-++...+  +     .+.. .  ........++|.|+|.+.++.+
T Consensus       105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence                    234555554321  1     1111 1  1235578999999999777654

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=97.02  E-value=0.022  Score=38.01  Aligned_cols=104  Identities=12%  Similarity=0.049  Sum_probs=65.4

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCC------Ce-------EEeeccccceEEEEEccCCCEEEEeCCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGME-NSNVEVLHALKP------DK-------YQLHLHESCVLSLRFAACGKWFVSTGKDN   81 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~~------~~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~   81 (131)
                      ......-.+..+|||++++.++. +.++.++|.+.-      ++       .....-...+...+|.++|....+.--|.
T Consensus       320 P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidS  399 (638)
T 3sbq_A          320 PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDS  399 (638)
T ss_dssp             EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTT
T ss_pred             eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecc
Confidence            44445566888999999877654 678999998731      11       11112344678899999996555666789


Q ss_pred             eEEEeeCCCC------c----eEEecCCCCCeEEEEE------CCCCCEEEEec
Q psy15612         82 LLNAWRTPYG------A----SIFQSKESSSVLSCDI------SADDKYIVTGS  119 (131)
Q Consensus        82 ~i~~w~~~~~------~----~~~~~~~~~~v~~~~~------~~~~~~l~~~~  119 (131)
                      .+..|++...      +    .+........+-.+.-      .|+|++|++..
T Consensus       400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln  453 (638)
T 3sbq_A          400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS  453 (638)
T ss_dssp             EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred             eEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence            9999998643      1    1222222233333333      56888888764

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.00  E-value=0.044  Score=38.06  Aligned_cols=111  Identities=6%  Similarity=-0.171  Sum_probs=71.9

Q ss_pred             CCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCC--CCeEEEeeCCCCceE
Q psy15612         19 SQIFSLGYCPSGEWLAV-GMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGK--DNLLNAWRTPYGASI   94 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~   94 (131)
                      ..+..+++.+.+..|+. -...+.|.+.++.+.....+. ..-..+..+++.|.+..|+.+..  .+.|...++......
T Consensus       471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~  550 (791)
T 3m0c_C          471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  550 (791)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred             CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence            44567888877755554 445678999999876654443 33456889999997666655432  367888888754444


Q ss_pred             -EecCCCCCeEEEEECCCCCEEEEec-CCCcEEEEEe
Q psy15612         95 -FQSKESSSVLSCDISADDKYIVTGS-GDKKATVYEV  129 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~vw~~  129 (131)
                       .....-..+..+++++.+..|+.+. ..+.|...++
T Consensus       551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~  587 (791)
T 3m0c_C          551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV  587 (791)
T ss_dssp             EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence             3333346788999997766665543 3455665553

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.98  E-value=0.024  Score=34.80  Aligned_cols=112  Identities=9%  Similarity=-0.061  Sum_probs=70.5

Q ss_pred             CCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCCc
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYGA   92 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~   92 (131)
                      .......+++.|.+..|+.+.  ..+.|...++.......+. ..-.....++++|++..++.+ +..+.|..+++....
T Consensus       120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~  199 (318)
T 3sov_A          120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN  199 (318)
T ss_dssp             SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence            335678899998766666555  2577888888765544332 233457899999976666554 556789999987443


Q ss_pred             eE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         93 SI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        93 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      .. ........+..+++.. +..+.+-...+.|..++.
T Consensus       200 ~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~  236 (318)
T 3sov_A          200 RQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNK  236 (318)
T ss_dssp             CEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred             eEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence            33 3333445667777753 344445445566666653

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.90  E-value=0.027  Score=34.40  Aligned_cols=89  Identities=9%  Similarity=0.086  Sum_probs=54.1

Q ss_pred             EEECCCCCEEEEEe----CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC-CCeEEEeeCCCCceEEecC
Q psy15612         24 LGYCPSGEWLAVGM----ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK-DNLLNAWRTPYGASIFQSK   98 (131)
Q Consensus        24 ~~~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~w~~~~~~~~~~~~   98 (131)
                      ..++++++.|+...    ....|...++.+.....+..+..    ..++++++.|+-.+. ...|..-++..+....+..
T Consensus       109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~  184 (302)
T 3s25_A          109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD  184 (302)
T ss_dssp             EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC
T ss_pred             cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC
Confidence            36777888888765    34456666777666655655433    346778888876654 5678877877655443322


Q ss_pred             CCCCeEEEEECCCCCEEEEec
Q psy15612         99 ESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        99 ~~~~v~~~~~~~~~~~l~~~~  119 (131)
                        +... ..+.|++.+|+-..
T Consensus       185 --~~~~-~~~~P~g~~iy~t~  202 (302)
T 3s25_A          185 --CNCY-KPVVLDDTNVYYMD  202 (302)
T ss_dssp             --SCEE-EEEEEETTEEEEEE
T ss_pred             --CCcc-ceeeecCCEEEEEE
Confidence              1222 23557777766443

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.73  E-value=0.043  Score=34.17  Aligned_cols=102  Identities=7%  Similarity=-0.007  Sum_probs=58.3

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE---e----eccccceEEEEEccC---CCEEEEe-CC-------
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ---L----HLHESCVLSLRFAAC---GKWFVST-GK-------   79 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~~~~~-~~-------   79 (131)
                      -.....++|.|+|+.++.+...+.|.+++........   +    .........++++|+   +..++.+ +.       
T Consensus        17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~   96 (353)
T 2g8s_A           17 LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA   96 (353)
T ss_dssp             ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred             CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence            3567899999999834455567899998854321111   1    112345689999996   4444433 22       


Q ss_pred             CCeEEEeeCCCC--c---eE-Eec--C----CCCCeEEEEECCCCCEEEEec
Q psy15612         80 DNLLNAWRTPYG--A---SI-FQS--K----ESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        80 ~~~i~~w~~~~~--~---~~-~~~--~----~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      ...|..++....  .   .. ...  .    .......++|.|+|.++++.+
T Consensus        97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G  148 (353)
T 2g8s_A           97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG  148 (353)
T ss_dssp             EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred             eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence            234666665432  1   11 111  1    122346799999997666543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.72  E-value=0.066  Score=36.08  Aligned_cols=104  Identities=6%  Similarity=-0.067  Sum_probs=64.9

Q ss_pred             cCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCe-EE-eeccccceEEEEEccCCCEEE-EeCCCCeEEEeeCCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALKPDK-YQ-LHLHESCVLSLRFAACGKWFV-STGKDNLLNAWRTPYG   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~~-~~-~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~~~~~   91 (131)
                      .....+..+++++.+..|+.+. ..+.|..+++.+... .. +...-..+..+++.+.+..++ +-...+.|.+.++...
T Consensus        37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~  116 (619)
T 3s94_A           37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS  116 (619)
T ss_dssp             BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence            3445678999998777666554 456788888876532 22 222335688999998655554 4566788999998755


Q ss_pred             ceE-EecCCCCCeEEEEECCCCCEEEEec
Q psy15612         92 ASI-FQSKESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        92 ~~~-~~~~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      ... .....-..+..+++.|.+..|+.+.
T Consensus       117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD  145 (619)
T 3s94_A          117 LRKVLFWQELDQPRAIALDPSSGFMYWTD  145 (619)
T ss_dssp             SCEEEECSSCSCCCCEEEETTTTEEEEEE
T ss_pred             CEEEEEeCCCCCCceEEEecCCCeEEEec
Confidence            443 3223445677899988755554443

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.72  E-value=0.067  Score=36.06  Aligned_cols=110  Identities=9%  Similarity=-0.102  Sum_probs=70.5

Q ss_pred             CCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCC--CCeEEEeeCCCCceE
Q psy15612         19 SQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGK--DNLLNAWRTPYGASI   94 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~--~~~i~~w~~~~~~~~   94 (131)
                      ..+..+++.+.+..|+.+ ...+.|.+.++.+.....+. ..-..+..+++.|.+..++.+..  ...|...++......
T Consensus        84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~  163 (619)
T 3s94_A           84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF  163 (619)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred             CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence            467889998866655544 55678999999876654443 34456789999997555554432  456776776643333


Q ss_pred             -EecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEE
Q psy15612         95 -FQSKESSSVLSCDISADDKYIVTG-SGDKKATVYE  128 (131)
Q Consensus        95 -~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~  128 (131)
                       .....-..+..+++++++..|+.+ ...+.|...|
T Consensus       164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~  199 (619)
T 3s94_A          164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN  199 (619)
T ss_dssp             EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEES
T ss_pred             EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEec
Confidence             332345668899999876655544 3445565554

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.62  E-value=0.045  Score=32.90  Aligned_cols=97  Identities=13%  Similarity=0.067  Sum_probs=52.9

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCCeEEeecc---ccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCceEE
Q psy15612         29 SGEWLAVGMEN-----SNVEVLHALKPDKYQLHLH---ESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGASIF   95 (131)
Q Consensus        29 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~   95 (131)
                      +++.++.|+.+     ..+..||+.+..-..+...   ......+.+  +++.++.++.+     +.+.+||+.+.+...
T Consensus       159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~  236 (301)
T 2vpj_A          159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT  236 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence            56666666543     4588899887765443221   111122222  56667777654     468899998887763


Q ss_pred             ecCC---CCCeEEEEECCCCCEEEEecCCC-----cEEEEEe
Q psy15612         96 QSKE---SSSVLSCDISADDKYIVTGSGDK-----KATVYEV  129 (131)
Q Consensus        96 ~~~~---~~~v~~~~~~~~~~~l~~~~~d~-----~i~vw~~  129 (131)
                      ....   ......+.+  ++++++.|+.++     .+.+||+
T Consensus       237 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~  276 (301)
T 2vpj_A          237 VTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDP  276 (301)
T ss_dssp             ECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEET
T ss_pred             CCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcC
Confidence            3221   111122222  566667766542     3555554

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.58  E-value=0.087  Score=35.60  Aligned_cols=110  Identities=8%  Similarity=-0.049  Sum_probs=71.1

Q ss_pred             CCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCCceE
Q psy15612         18 SSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYGASI   94 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~~~   94 (131)
                      -.....+++.|....|+.+.  ..+.|...++.......+...-..+..+++++++..++.+ ...+.|..+++......
T Consensus       122 l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~  201 (628)
T 4a0p_A          122 LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE  201 (628)
T ss_dssp             CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence            34578999998665665554  2567888888776655544445678899999987766655 55678999998754444


Q ss_pred             EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         95 FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ...........+++.. ++.+.+-...+.|...|
T Consensus       202 v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d  234 (628)
T 4a0p_A          202 VIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN  234 (628)
T ss_dssp             EEEECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred             EeeccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence            3333344566777764 34444444456666554

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=96.56  E-value=0.099  Score=36.05  Aligned_cols=107  Identities=5%  Similarity=-0.021  Sum_probs=72.8

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec---------cccceEEEEEccCCCEEEEeCCCCeEEEeeCC
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---------HESCVLSLRFAACGKWFVSTGKDNLLNAWRTP   89 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~   89 (131)
                      ..|.++...++|.+ ..|..++-+..++..++....+..         ....|.++...++|+.+..++.++.+..+|..
T Consensus       357 ~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~  435 (795)
T 4a2l_A          357 NVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN  435 (795)
T ss_dssp             SSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred             CeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence            45888888887764 456666568899988776544321         13568888888888844456666779999998


Q ss_pred             CCceEEec-----CCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         90 YGASIFQS-----KESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        90 ~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +++.....     .....|.++...++|++.+.+. +| +..||
T Consensus       436 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~G-l~~~~  477 (795)
T 4a2l_A          436 SGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SA-LVRFN  477 (795)
T ss_dssp             TCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SC-EEEEE
T ss_pred             CCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-Cc-eeEEe
Confidence            87765322     1346788999888888665543 33 55565

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.43  E-value=0.12  Score=35.56  Aligned_cols=107  Identities=9%  Similarity=-0.017  Sum_probs=68.2

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-c-----ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCC
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-H-----ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYG   91 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~-----~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~   91 (131)
                      ...|.++...+++.+.+ +.. +-+..++..+.+...+.. .     ...+.++...++|...+... .+.+..+|..++
T Consensus       449 ~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~~Gl~~~~~~~~  525 (781)
T 3v9f_A          449 LLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-GGGVGIYTPDMQ  525 (781)
T ss_dssp             CCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-SSCEEEECTTCC
T ss_pred             CCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-CCCEEEEeCCCC
Confidence            35688888887776544 444 458889988766533322 1     35688898888888766554 334777888776


Q ss_pred             ceEEec-C---CCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         92 ASIFQS-K---ESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        92 ~~~~~~-~---~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +..... .   ....|.++...++|++.+.+. +|.+..||
T Consensus       526 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d  565 (781)
T 3v9f_A          526 LVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS  565 (781)
T ss_dssp             EEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred             eEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence            655221 1   245688898888888655543 44324443

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.40  E-value=0.13  Score=35.46  Aligned_cols=106  Identities=11%  Similarity=0.034  Sum_probs=69.3

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-   94 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-   94 (131)
                      ..|.++...+++.+.+ |..++-+..++..+++...+..   ....|.++...++|...+...  +.+..+|..+++.. 
T Consensus       407 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~  483 (781)
T 3v9f_A          407 NSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIH  483 (781)
T ss_dssp             SBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCE
T ss_pred             cceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEe
Confidence            4688888887776544 5555568888887776544432   345688888888887665544  56888998876654 


Q ss_pred             EecCC-----CCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         95 FQSKE-----SSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        95 ~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      .....     ...+.++...++|++.+....+| +..+|
T Consensus       484 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~  521 (781)
T 3v9f_A          484 HYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYT  521 (781)
T ss_dssp             EECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEEC
T ss_pred             cccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEe
Confidence            22111     46788999988888665543344 44444

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.39  E-value=0.12  Score=34.99  Aligned_cols=118  Identities=6%  Similarity=-0.075  Sum_probs=73.8

Q ss_pred             EEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEE-E
Q psy15612          2 YLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFV-S   76 (131)
Q Consensus         2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~-~   76 (131)
                      +..|+++.+....+  ..-..+..++|++.+..|+.+ ..++.|..+++.+.....+.. ....+..+++.+.+..++ +
T Consensus        18 ~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~t   97 (628)
T 4a0p_A           18 RRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWA   97 (628)
T ss_dssp             EEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEE
T ss_pred             EEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEE
Confidence            44566554433222  233468899999876666554 456788888887665544332 224577899887655554 4


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEec
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      -...+.|.+.++...... .....-..+..+++.|....|+.+.
T Consensus        98 D~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD  141 (628)
T 4a0p_A           98 DTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTE  141 (628)
T ss_dssp             ETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEE
T ss_pred             ECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeC
Confidence            455678899998754443 2224446678999998655555443

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.08  E-value=0.1  Score=31.37  Aligned_cols=97  Identities=18%  Similarity=0.134  Sum_probs=52.6

Q ss_pred             CCCEEEEEeC-------CCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCce
Q psy15612         29 SGEWLAVGME-------NSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGAS   93 (131)
Q Consensus        29 ~~~~l~~~~~-------~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~   93 (131)
                      +++.++.|+.       ...+..||+.+..-..+..   .......+.+  +++.++.++.+     +.+.+||+.+.+.
T Consensus       155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W  232 (302)
T 2xn4_A          155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW  232 (302)
T ss_dssp             TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred             CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence            5666666543       2358889988776443321   1111222222  56777777654     4688999988776


Q ss_pred             EEecCCC---CCeEEEEECCCCCEEEEecCCC-----cEEEEEe
Q psy15612         94 IFQSKES---SSVLSCDISADDKYIVTGSGDK-----KATVYEV  129 (131)
Q Consensus        94 ~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~-----~i~vw~~  129 (131)
                      .......   ..-..+.  .++++++.|+.++     .+.+||+
T Consensus       233 ~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~  274 (302)
T 2xn4_A          233 RQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNP  274 (302)
T ss_dssp             EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEET
T ss_pred             eeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcC
Confidence            6332211   1111222  2566667766543     4677765

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=96.05  E-value=0.1  Score=31.09  Aligned_cols=108  Identities=12%  Similarity=0.064  Sum_probs=67.8

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC---C-CeEEee-------ccccceEEEEEccC-CCEEEEeCCCCeEEE
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALK---P-DKYQLH-------LHESCVLSLRFAAC-GKWFVSTGKDNLLNA   85 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~---~-~~~~~~-------~~~~~v~~~~~~~~-~~~~~~~~~~~~i~~   85 (131)
                      +.....++++|.++.|.++.......+|....   . ......       .....+..++++|. +.+++.+...+.+..
T Consensus       120 N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~  199 (255)
T 3qqz_A          120 NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQE  199 (255)
T ss_dssp             SSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             cCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEE
Confidence            34568999999987777766555555555531   1 111111       12235678999995 556667777888999


Q ss_pred             eeCCCCceE-Ee-cCC--------CCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         86 WRTPYGASI-FQ-SKE--------SSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        86 w~~~~~~~~-~~-~~~--------~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      +|.. |+.+ .. ...        -.....++|.++|+++++ ++...+..+
T Consensus       200 ~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f  249 (255)
T 3qqz_A          200 VTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF  249 (255)
T ss_dssp             ECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred             EcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence            9976 5554 21 111        136789999999985555 555544444

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=95.93  E-value=0.31  Score=35.53  Aligned_cols=106  Identities=12%  Similarity=0.033  Sum_probs=62.9

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccC------CCEEEEeCC-CCeEEEeeCCC
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAAC------GKWFVSTGK-DNLLNAWRTPY   90 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~------~~~~~~~~~-~~~i~~w~~~~   90 (131)
                      .|...+.+  +.+++.+. .+.+..+++..+.+...  ..-...|.|+++.|.      .++++.+.+ |++++++++.+
T Consensus       515 ~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~  591 (1158)
T 3ei3_A          515 NISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS  591 (1158)
T ss_dssp             CCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred             EEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence            45544443  23555554 56777777765443221  223567999998763      368888886 99999999987


Q ss_pred             CceEEe--cCCCCCeEEEEEC--CCCCEEEEecCCCcEEEEE
Q psy15612         91 GASIFQ--SKESSSVLSCDIS--ADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        91 ~~~~~~--~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~vw~  128 (131)
                      -+.+..  .+....+.++.+.  ....++..|-.||.+.-+.
T Consensus       592 l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~  633 (1158)
T 3ei3_A          592 FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFG  633 (1158)
T ss_dssp             CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred             CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence            665522  2222344444433  2234666777787765444

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=95.76  E-value=0.096  Score=30.77  Aligned_cols=63  Identities=8%  Similarity=-0.078  Sum_probs=40.9

Q ss_pred             cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE------Eec---CCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         60 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI------FQS---KESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~------~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      ..+.+++|+|+|...+.  .++.++-.+..+....      ...   +-.. -..+.|.|+|.+.++  .|+.|.-+
T Consensus        41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~  112 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKA  112 (236)
T ss_dssp             TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEE
T ss_pred             ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEe
Confidence            36779999999986666  6777777776553322      111   1111 367889999998877  45776544

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=95.39  E-value=0.23  Score=30.33  Aligned_cols=88  Identities=5%  Similarity=-0.055  Sum_probs=51.1

Q ss_pred             EEECCCCCEEEEEeC-CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC--CeEEEeeCCCCceEEecCCC
Q psy15612         24 LGYCPSGEWLAVGME-NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD--NLLNAWRTPYGASIFQSKES  100 (131)
Q Consensus        24 ~~~~~~~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~i~~w~~~~~~~~~~~~~~  100 (131)
                      .+++|+++.|+..+. ...|...++.+.....+....  .. ..++|++.+|+-....  ..|..-++..+....+..  
T Consensus       150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~--~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~--  224 (302)
T 3s25_A          150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN--CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTE--  224 (302)
T ss_dssp             CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSC--EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSC--
T ss_pred             eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCC--cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeC--
Confidence            345778888876655 567888888776655543322  12 2356888888765443  356666666544443322  


Q ss_pred             CCeEEEEECCCCCEEEEe
Q psy15612        101 SSVLSCDISADDKYIVTG  118 (131)
Q Consensus       101 ~~v~~~~~~~~~~~l~~~  118 (131)
                      ..+  ..++|++++|+.+
T Consensus       225 ~~~--~~~~~~g~~Iy~~  240 (302)
T 3s25_A          225 ANI--EHYNVYGSLIFYQ  240 (302)
T ss_dssp             SCE--EEEEEETTEEEEE
T ss_pred             CCc--ceEEECCCEEEEE
Confidence            222  2366667766544

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=95.31  E-value=0.24  Score=30.02  Aligned_cols=88  Identities=13%  Similarity=-0.010  Sum_probs=47.5

Q ss_pred             CCCEEEEEeC------CCcEEEEeCCCCCeEEeecc---ccceEEEEEccCCCEEEEeCCCC-----eEEEeeCCCCceE
Q psy15612         29 SGEWLAVGME------NSNVEVLHALKPDKYQLHLH---ESCVLSLRFAACGKWFVSTGKDN-----LLNAWRTPYGASI   94 (131)
Q Consensus        29 ~~~~l~~~~~------~~~v~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~-----~i~~w~~~~~~~~   94 (131)
                      +++.++.|+.      ...+.+||..+..-..+...   ......+.+  +++.++.++.++     .+.+||+.+.+..
T Consensus       148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~  225 (315)
T 4asc_A          148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA  225 (315)
T ss_dssp             TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred             CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence            5666666665      24588899887764333221   111122222  567777776543     4788999888766


Q ss_pred             EecCC---CCCeEEEEECCCCCEEEEecC
Q psy15612         95 FQSKE---SSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        95 ~~~~~---~~~v~~~~~~~~~~~l~~~~~  120 (131)
                      .....   ......+.+  ++++++.|+.
T Consensus       226 ~~~~~p~~r~~~~~~~~--~~~l~v~GG~  252 (315)
T 4asc_A          226 PFEAFPQERSSLSLVSL--VGTLYAIGGF  252 (315)
T ss_dssp             EECCCSSCCBSCEEEEE--TTEEEEEEEE
T ss_pred             ECCCCCCcccceeEEEE--CCEEEEECCc
Confidence            33221   111122222  5566666654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=95.30  E-value=0.24  Score=29.87  Aligned_cols=64  Identities=14%  Similarity=0.160  Sum_probs=38.9

Q ss_pred             CCCEEEEEeCC----CcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC------CeEEEeeCCCCceE
Q psy15612         29 SGEWLAVGMEN----SNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD------NLLNAWRTPYGASI   94 (131)
Q Consensus        29 ~~~~l~~~~~~----~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~------~~i~~w~~~~~~~~   94 (131)
                      ++..++.|+.+    ..+.+||..+..-..+..   .......+.+  +++.++.++.+      ..+.+||..+.+..
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~  131 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH  131 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence            56666776644    568889988776443322   1111222222  56777777654      45889999887765

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=95.27  E-value=0.35  Score=31.62  Aligned_cols=106  Identities=11%  Similarity=0.133  Sum_probs=70.9

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeecc----ccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLH----ESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~----~~~v~~~~~~~~~~~~   74 (131)
                      ++++|+++.+.++.....+.|.-..|-.+. .|+... +..|.-|++....  ...+..|    ...|..-.-+++.+++
T Consensus        88 lQiFnle~K~klks~~~~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~  165 (494)
T 1bpo_A           88 LQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWL  165 (494)
T ss_dssp             EEEEETTTTEEEEEEECSSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEE
T ss_pred             EEEEchHHhhhhcceecCCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeE
Confidence            478999999999888777788888986443 444443 3469999997532  2333333    3467777788999987


Q ss_pred             EEeC-------CCCeEEEeeCCCCceEEecCCCCCeEEEEE
Q psy15612         75 VSTG-------KDNLLNAWRTPYGASIFQSKESSSVLSCDI  108 (131)
Q Consensus        75 ~~~~-------~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~  108 (131)
                      +..+       -.|.+.+|..+.+......+|......+..
T Consensus       166 ~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~  206 (494)
T 1bpo_A          166 LLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKM  206 (494)
T ss_dssp             EEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEEC
T ss_pred             EEEeecccCCcccceEEEeeccccccchheeeeeeeEEEec
Confidence            6432       136788999887766666666554444433

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=95.06  E-value=0.28  Score=29.47  Aligned_cols=98  Identities=14%  Similarity=0.195  Sum_probs=51.5

Q ss_pred             CCCEEEEEeCCC-----cEEEEeCCCCCeEEeeccc--cceEEEEEccCCCEEEEeCC-------CCeEEEeeCCCCceE
Q psy15612         29 SGEWLAVGMENS-----NVEVLHALKPDKYQLHLHE--SCVLSLRFAACGKWFVSTGK-------DNLLNAWRTPYGASI   94 (131)
Q Consensus        29 ~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~-------~~~i~~w~~~~~~~~   94 (131)
                      +++.++.|+.++     .+.+||+.+..-..+....  ..-..+.. -+++.++.++.       ...+..||+.+.+..
T Consensus       108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~  186 (302)
T 2xn4_A          108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT  186 (302)
T ss_dssp             TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred             CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence            566667776543     4778888877644332211  11112222 25666666654       245888999887766


Q ss_pred             EecCC---CCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612         95 FQSKE---SSSVLSCDISADDKYIVTGSGD-----KKATVYEV  129 (131)
Q Consensus        95 ~~~~~---~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~  129 (131)
                      .....   ......+.+  ++++++.|+.+     ..+.+||+
T Consensus       187 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~  227 (302)
T 2xn4_A          187 YIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDP  227 (302)
T ss_dssp             EECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEET
T ss_pred             ECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeC
Confidence            33221   111122222  56666676653     24666664

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=95.02  E-value=0.32  Score=29.86  Aligned_cols=106  Identities=8%  Similarity=0.052  Sum_probs=60.1

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-E
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-F   95 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~   95 (131)
                      +.+..+.+.+++..++.+ .++.+.. ....++ -... ......+..+.+.|++..++.+......+..|-...... .
T Consensus       122 ~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~  199 (327)
T 2xbg_A          122 GSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH  199 (327)
T ss_dssp             SCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE
T ss_pred             CCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC
Confidence            456777776666666555 4554433 222232 2222 234456888999999888877765444444443111222 2


Q ss_pred             ecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         96 QSKESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      .......+..+.+.++++.++.+ .++.+.+.
T Consensus       200 ~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s  230 (327)
T 2xbg_A          200 NRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFS  230 (327)
T ss_dssp             ECCSSSCEEEEEECTTSCEEEEE-TTTEEEEE
T ss_pred             CCCCCCccceeEECCCCCEEEEe-CCceEEEe
Confidence            23445678888898888766544 34555443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=94.99  E-value=0.31  Score=29.49  Aligned_cols=97  Identities=14%  Similarity=0.086  Sum_probs=52.7

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCceEE
Q psy15612         29 SGEWLAVGMEN-----SNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGASIF   95 (131)
Q Consensus        29 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~   95 (131)
                      ++++++.|+.+     ..+..||+.+..-..+..   .......+.+  +++.++.++.+     ..+.+||+.+.+...
T Consensus       168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~  245 (308)
T 1zgk_A          168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF  245 (308)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence            56666666543     458889988776433321   1111222222  56777777654     568899998877663


Q ss_pred             ecCCC---CCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612         96 QSKES---SSVLSCDISADDKYIVTGSGD-----KKATVYEV  129 (131)
Q Consensus        96 ~~~~~---~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~  129 (131)
                      ....+   .....+.+  ++++++.|+.+     ..+.+||+
T Consensus       246 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~  285 (308)
T 1zgk_A          246 VAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDP  285 (308)
T ss_dssp             CCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEET
T ss_pred             CCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcC
Confidence            32211   11122222  56666776643     24556664

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=94.83  E-value=0.34  Score=29.27  Aligned_cols=97  Identities=16%  Similarity=0.139  Sum_probs=52.0

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCceEE
Q psy15612         29 SGEWLAVGMEN-----SNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGASIF   95 (131)
Q Consensus        29 ~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~~~~   95 (131)
                      +++.++.|+.+     ..+.+||..+..-..+..   .......+.+  +++.++.++.+     +.+..||+.+.+...
T Consensus       121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~  198 (308)
T 1zgk_A          121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM  198 (308)
T ss_dssp             TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence            56666665532     358889988776433321   1111222222  56666676654     458889998877663


Q ss_pred             ecCC---CCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612         96 QSKE---SSSVLSCDISADDKYIVTGSGD-----KKATVYEV  129 (131)
Q Consensus        96 ~~~~---~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~  129 (131)
                      ....   ...-..+.+  ++++++.|+.+     ..+.+||+
T Consensus       199 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~  238 (308)
T 1zgk_A          199 ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDV  238 (308)
T ss_dssp             CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEET
T ss_pred             CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeC
Confidence            2221   111122222  56666666543     34666664

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=94.76  E-value=0.35  Score=29.10  Aligned_cols=97  Identities=12%  Similarity=0.055  Sum_probs=51.7

Q ss_pred             CCCEEEEEeCC------CcEEEEeCCCCCeEEeecc---ccceEEEEEccCCCEEEEeCC---------CCeEEEeeCCC
Q psy15612         29 SGEWLAVGMEN------SNVEVLHALKPDKYQLHLH---ESCVLSLRFAACGKWFVSTGK---------DNLLNAWRTPY   90 (131)
Q Consensus        29 ~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~---------~~~i~~w~~~~   90 (131)
                      +++.++.|+.+      ..+.+||..+..-..+...   ......+.  -+++.++.++.         .+.+.+||+.+
T Consensus       101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~  178 (306)
T 3ii7_A          101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT  178 (306)
T ss_dssp             TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred             CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence            56666776654      4588899887764433221   11112222  25666666653         34588999988


Q ss_pred             CceEEecCCC---CCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612         91 GASIFQSKES---SSVLSCDISADDKYIVTGSGD-----KKATVYEV  129 (131)
Q Consensus        91 ~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~  129 (131)
                      .+.......+   ..-..+.+  ++++++.|+.+     ..+.+||+
T Consensus       179 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~  223 (306)
T 3ii7_A          179 ETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDI  223 (306)
T ss_dssp             TEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEET
T ss_pred             CeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeC
Confidence            8766332211   11112222  56666666543     24666664

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=94.38  E-value=0.54  Score=29.56  Aligned_cols=108  Identities=15%  Similarity=0.134  Sum_probs=63.6

Q ss_pred             CeEEEEECC--CCC-EEEEE-eC--CCcEEEEeCCCC--Ce---EEeec-cccceEEEEEccCCCEEEEeCC--------
Q psy15612         20 QIFSLGYCP--SGE-WLAVG-ME--NSNVEVLHALKP--DK---YQLHL-HESCVLSLRFAACGKWFVSTGK--------   79 (131)
Q Consensus        20 ~v~~~~~~~--~~~-~l~~~-~~--~~~v~~~~~~~~--~~---~~~~~-~~~~v~~~~~~~~~~~~~~~~~--------   79 (131)
                      ....+.+.+  ++. .|+.+ ..  +..+.+|++...  ..   ..+.. .-....++...++|+..++...        
T Consensus       113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~  192 (355)
T 3sre_A          113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK  192 (355)
T ss_dssp             CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred             eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence            566666654  354 34333 22  456777776533  22   12222 2245789999999997766531        


Q ss_pred             ---------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612         80 ---------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV  129 (131)
Q Consensus        80 ---------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~  129 (131)
                               .+.+..++.  ++.......-.....++|+|+++.++.+ +..+.|..|++
T Consensus       193 ~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~  250 (355)
T 3sre_A          193 SWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEK  250 (355)
T ss_dssp             HHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred             cchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence                     234555554  3333333334567899999999877654 44678888886

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=94.33  E-value=0.59  Score=31.56  Aligned_cols=57  Identities=23%  Similarity=0.285  Sum_probs=41.2

Q ss_pred             eEEEEEccCCCEEEEeCCC------------CeEEEeeCCCCceE-E-ecCCCCCeEEEEECCCCCEEEEe
Q psy15612         62 VLSLRFAACGKWFVSTGKD------------NLLNAWRTPYGASI-F-QSKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        62 v~~~~~~~~~~~~~~~~~~------------~~i~~w~~~~~~~~-~-~~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                      +--+.|+|.|++++....+            +.+...+..+++.. + .......++.++|+|+++.|+..
T Consensus       478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn  548 (592)
T 3zwu_A          478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence            4569999999987765432            34566677777766 3 33467889999999999987654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=94.18  E-value=0.7  Score=30.13  Aligned_cols=102  Identities=16%  Similarity=0.096  Sum_probs=59.6

Q ss_pred             CCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC----eEEee---c------cccceEEEEEccC----CCEEEEeCC-
Q psy15612         19 SQIFSLGYCPSGE-WLAVGMENSNVEVLHALKPD----KYQLH---L------HESCVLSLRFAAC----GKWFVSTGK-   79 (131)
Q Consensus        19 ~~v~~~~~~~~~~-~l~~~~~~~~v~~~~~~~~~----~~~~~---~------~~~~v~~~~~~~~----~~~~~~~~~-   79 (131)
                      .....|+|.|++. .++++...+.|++++.....    ...+.   .      .......++|+|+    +...++-+. 
T Consensus        14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~   93 (463)
T 2wg3_C           14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN   93 (463)
T ss_dssp             SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred             CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence            5677899999986 45556788999999754321    11111   1      1356788999996    443333221 


Q ss_pred             -C----------CeEEEeeCCC----------CceEEe---cCCCCCeEEEEECCCCCEEEEecC
Q psy15612         80 -D----------NLLNAWRTPY----------GASIFQ---SKESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        80 -~----------~~i~~w~~~~----------~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                       +          ..|.-|.+..          .+.+..   ......-..++|.|||.+.++.+.
T Consensus        94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd  158 (463)
T 2wg3_C           94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD  158 (463)
T ss_dssp             CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred             CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence             1          1344455432          112211   123455789999999987776554

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=94.15  E-value=0.56  Score=33.48  Aligned_cols=34  Identities=15%  Similarity=0.152  Sum_probs=29.9

Q ss_pred             ceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         61 CVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        61 ~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      .+.++...++..++++-+.|+++++|++.+++++
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v  270 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV  270 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeE
Confidence            4667777888889999999999999999999887

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=94.14  E-value=1.4  Score=33.44  Aligned_cols=130  Identities=11%  Similarity=0.114  Sum_probs=79.3

Q ss_pred             CEEEeCCC-Cceeeee-cC----CCCeEEEEECCCCCEEEEEe-------CCCcEEEEeCCCCCeEEeeccccceEEEEE
Q psy15612          1 MYLQSVSP-GRQLQQH-DF----SSQIFSLGYCPSGEWLAVGM-------ENSNVEVLHALKPDKYQLHLHESCVLSLRF   67 (131)
Q Consensus         1 i~iwd~~~-~~~~~~~-~~----~~~v~~~~~~~~~~~l~~~~-------~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~   67 (131)
                      |+-|++.. ..+.+.+ .|    +.+|..-..+++.++++..+       -.|.+.+|+.+.+..+.+.+|.+....+..
T Consensus       127 VyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~  206 (1630)
T 1xi4_A          127 VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKM  206 (1630)
T ss_pred             EEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheecc
Confidence            46688763 2333333 22    35677788889999876533       247788999887776666666655444444


Q ss_pred             c--cCC-CEEEEeCC---CCeEEEeeCCCC---ceEEe-------c---CCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         68 A--ACG-KWFVSTGK---DNLLNAWRTPYG---ASIFQ-------S---KESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        68 ~--~~~-~~~~~~~~---~~~i~~w~~~~~---~~~~~-------~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      .  +.. ..++.+.+   .+.+++-++...   ...+.       .   ...+.+..+..++....+.....-|.+.++|
T Consensus       207 ~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d  286 (1630)
T 1xi4_A          207 EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYD  286 (1630)
T ss_pred             CCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEe
Confidence            2  222 23333322   357888877432   11111       1   1356677888888877777777889999999


Q ss_pred             ee
Q psy15612        129 VI  130 (131)
Q Consensus       129 ~~  130 (131)
                      +.
T Consensus       287 ~~  288 (1630)
T 1xi4_A          287 LE  288 (1630)
T ss_pred             cc
Confidence            73

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=93.86  E-value=0.68  Score=28.82  Aligned_cols=56  Identities=14%  Similarity=0.293  Sum_probs=37.4

Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-Ee-c----CCCCCeEEEEECCC---CCEEEE
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQ-S----KESSSVLSCDISAD---DKYIVT  117 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~-~----~~~~~v~~~~~~~~---~~~l~~  117 (131)
                      -.....++|.|+|+.+++ ...+.|.+++  +++.. .. .    ........++++|+   +..++.
T Consensus        30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv   94 (352)
T 2ism_A           30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYA   94 (352)
T ss_dssp             CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred             CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEE
Confidence            445789999999995554 4568899888  44432 11 1    12456889999998   444443

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=93.80  E-value=0.6  Score=27.98  Aligned_cols=97  Identities=13%  Similarity=0.110  Sum_probs=51.9

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCCC---eEEeec---cccceEEEEEccCCCEEEEeCCC-----CeEEEeeCCCCc
Q psy15612         29 SGEWLAVGMEN-----SNVEVLHALKPD---KYQLHL---HESCVLSLRFAACGKWFVSTGKD-----NLLNAWRTPYGA   92 (131)
Q Consensus        29 ~~~~l~~~~~~-----~~v~~~~~~~~~---~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~-----~~i~~w~~~~~~   92 (131)
                      ++..++.|+.+     ..+.+||..+..   -..+..   .......+..  +++.++.++.+     +.+.+||..+.+
T Consensus        62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~  139 (301)
T 2vpj_A           62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ  139 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence            56666766644     458899988776   443322   1111222222  56666676643     358889988877


Q ss_pred             eEEecC---CCCCeEEEEECCCCCEEEEecCC-----CcEEEEEe
Q psy15612         93 SIFQSK---ESSSVLSCDISADDKYIVTGSGD-----KKATVYEV  129 (131)
Q Consensus        93 ~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----~~i~vw~~  129 (131)
                      ......   ....-..+.+  +++.++.|+.+     ..+.++|+
T Consensus       140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~  182 (301)
T 2vpj_A          140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDP  182 (301)
T ss_dssp             EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEET
T ss_pred             EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeC
Confidence            652221   1111122222  56666666543     34666664

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=93.34  E-value=1.7  Score=31.86  Aligned_cols=124  Identities=11%  Similarity=0.143  Sum_probs=67.0

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEE---CCC-CCEEEEEe----------CCCcEEEEeCCCCCeEEe--eccccce
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGY---CPS-GEWLAVGM----------ENSNVEVLHALKPDKYQL--HLHESCV   62 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~---~~~-~~~l~~~~----------~~~~v~~~~~~~~~~~~~--~~~~~~v   62 (131)
                      |++.|-.+.+.+..+  ..++.+.+++.   ..+ ..+++.|.          ..|.+.+|++...+...+  ...++.+
T Consensus       809 i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v  888 (1158)
T 3ei3_A          809 LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV  888 (1158)
T ss_dssp             EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCE
T ss_pred             EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcC
Confidence            466777777776655  44455555553   322 45777664          246799999875554322  3346677


Q ss_pred             EEEEEccCCCEEEEeCCCCeEEEeeCCCCceEE-ecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         63 LSLRFAACGKWFVSTGKDNLLNAWRTPYGASIF-QSKESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      .+++-- +|+.++..  ...+++|++...+.+. ....-..+..+.....+++++.|..-..+.+.
T Consensus       889 ~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~  951 (1158)
T 3ei3_A          889 YSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLL  951 (1158)
T ss_dssp             EEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEE
T ss_pred             EEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEE
Confidence            777633 46544433  4679999997655432 11111112222222245666666655444443

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=93.03  E-value=0.99  Score=28.18  Aligned_cols=51  Identities=14%  Similarity=0.236  Sum_probs=34.4

Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe-----cCCCCCeEEEEECCC
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-----SKESSSVLSCDISAD  111 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-----~~~~~~v~~~~~~~~  111 (131)
                      -.....++|.|+|+.+++ ..++.|.+++ .+++....     .........++++|+
T Consensus        28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pd   83 (354)
T 3a9g_A           28 LEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPE   83 (354)
T ss_dssp             CSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred             CCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCC
Confidence            345789999999985554 4568898887 44552211     112356889999997

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=92.64  E-value=1.6  Score=29.54  Aligned_cols=59  Identities=20%  Similarity=0.262  Sum_probs=41.8

Q ss_pred             cceEEEEEccCCCEEEEeCC------------CCeEEEeeCCCCceE-Eec-CCCCCeEEEEECCCCCEEEEe
Q psy15612         60 SCVLSLRFAACGKWFVSTGK------------DNLLNAWRTPYGASI-FQS-KESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~------------~~~i~~w~~~~~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~  118 (131)
                      ..+..+.|.++|.+.+....            .+.+..++..+++.. +.. .....+..++|+||++.|++.
T Consensus       476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~  548 (592)
T 4a9v_A          476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence            34668999999997774321            225667777778776 333 235678999999999988664

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=92.16  E-value=1.9  Score=29.25  Aligned_cols=58  Identities=10%  Similarity=0.040  Sum_probs=40.2

Q ss_pred             CeEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCCeEEe-ec-cccceEEEEEccCCCEEEEe
Q psy15612         20 QIFSLGYCPSGEWLAVGMEN------------SNVEVLHALKPDKYQL-HL-HESCVLSLRFAACGKWFVST   77 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~------------~~v~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~~~~   77 (131)
                      ..--+.|+|.|.+++....+            ..+...+..++++..+ .. ...++..+.|+||++.++..
T Consensus       477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn  548 (592)
T 3zwu_A          477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence            35678999999977765432            2355566667776444 22 35689999999999887654

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=91.68  E-value=2.3  Score=29.27  Aligned_cols=101  Identities=13%  Similarity=0.099  Sum_probs=56.5

Q ss_pred             CCCEEEEEeCC------CcEEEEeCCCCCeEEeecc--ccceEEEEEccCCCEEEEeCCCC--eEEEeeCCCCceEEecC
Q psy15612         29 SGEWLAVGMEN------SNVEVLHALKPDKYQLHLH--ESCVLSLRFAACGKWFVSTGKDN--LLNAWRTPYGASIFQSK   98 (131)
Q Consensus        29 ~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~--~i~~w~~~~~~~~~~~~   98 (131)
                      +++.++.|+.+      ..+.+||..+..-..+...  ...-.++....+++.++.|+.++  .+.+||..+.+......
T Consensus       451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~  530 (695)
T 2zwa_A          451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP  530 (695)
T ss_dssp             TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred             CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence            66677776643      3477888887664333211  11112333324778878877654  68899998887763321


Q ss_pred             ------CCCCeEEEEECCC-CCEEEEecC--C-----CcEEEEEe
Q psy15612         99 ------ESSSVLSCDISAD-DKYIVTGSG--D-----KKATVYEV  129 (131)
Q Consensus        99 ------~~~~v~~~~~~~~-~~~l~~~~~--d-----~~i~vw~~  129 (131)
                            ....-..+.+..+ ++.++.|+.  +     ..+.+||+
T Consensus       531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~  575 (695)
T 2zwa_A          531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKY  575 (695)
T ss_dssp             SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEE
T ss_pred             CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEc
Confidence                  1122223444544 566666664  2     24667775

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=91.68  E-value=2.3  Score=29.27  Aligned_cols=92  Identities=9%  Similarity=0.016  Sum_probs=50.7

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCeEEeec------cccceEEEEEccC
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENS--NVEVLHALKPDKYQLHL------HESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~------~~~~v~~~~~~~~   70 (131)
                      +.+||..+.+-...-  .....-.++..-.+++.++.|+.++  .+.+||..+..-..+..      .......+.+..+
T Consensus       470 v~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~  549 (695)
T 2zwa_A          470 NWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV  549 (695)
T ss_dssp             CEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred             EEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence            346777665433221  1111111223323777878776644  68999998876443321      1222233555555


Q ss_pred             -CCEEEEeCCC-------CeEEEeeCCCCc
Q psy15612         71 -GKWFVSTGKD-------NLLNAWRTPYGA   92 (131)
Q Consensus        71 -~~~~~~~~~~-------~~i~~w~~~~~~   92 (131)
                       ++.++.|+.+       +.+..||+.+.+
T Consensus       550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~  579 (695)
T 2zwa_A          550 SKQGIILGGGFMDQTTVSDKAIIFKYDAEN  579 (695)
T ss_dssp             TTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred             CCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence             6666777652       458889988877

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=91.50  E-value=1.5  Score=26.96  Aligned_cols=54  Identities=4%  Similarity=-0.167  Sum_probs=27.7

Q ss_pred             CcEEEEeCCCCCeEEeeccc--cce-EEEEEccCCCEEEEeCC------CCeEEEeeC--CCCceE
Q psy15612         40 SNVEVLHALKPDKYQLHLHE--SCV-LSLRFAACGKWFVSTGK------DNLLNAWRT--PYGASI   94 (131)
Q Consensus        40 ~~v~~~~~~~~~~~~~~~~~--~~v-~~~~~~~~~~~~~~~~~------~~~i~~w~~--~~~~~~   94 (131)
                      ..+.+||..+..-..+....  ..- ..+... +++.++.++.      ...+..+|+  .+.+..
T Consensus       168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~  232 (357)
T 2uvk_A          168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN  232 (357)
T ss_dssp             CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEE
T ss_pred             ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEE
Confidence            46889999877644332211  111 222222 5666666654      335677776  555544

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=91.30  E-value=1.5  Score=26.51  Aligned_cols=127  Identities=12%  Similarity=-0.011  Sum_probs=62.9

Q ss_pred             EEEeCCCCceeee-ec-CCCCeEEEEECCCCCEEEEEeC-----C------CcEEEEeCCCCCeEEeeccccc--eEEEE
Q psy15612          2 YLQSVSPGRQLQQ-HD-FSSQIFSLGYCPSGEWLAVGME-----N------SNVEVLHALKPDKYQLHLHESC--VLSLR   66 (131)
Q Consensus         2 ~iwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~-----~------~~v~~~~~~~~~~~~~~~~~~~--v~~~~   66 (131)
                      ..||..+++-... +. ...+........++..++.|+.     .      ..+..||..+.+-..+......  -..+.
T Consensus        16 ~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~   95 (315)
T 4asc_A           16 VAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLG   95 (315)
T ss_dssp             EEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEE
T ss_pred             EEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEE
Confidence            4678877664321 11 1223333344457777777763     1      1267788887764333221111  11222


Q ss_pred             EccCCCEEEEeCCC--------CeEEEeeCCCCceEEecCCC-CCeEEEEECCCCCEEEEecC-C-----CcEEEEEe
Q psy15612         67 FAACGKWFVSTGKD--------NLLNAWRTPYGASIFQSKES-SSVLSCDISADDKYIVTGSG-D-----KKATVYEV  129 (131)
Q Consensus        67 ~~~~~~~~~~~~~~--------~~i~~w~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-d-----~~i~vw~~  129 (131)
                      . -+++.++.++.+        +.+.+||..+.+.......+ ......+...+++.++.|+. +     ..+.++|+
T Consensus        96 ~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~  172 (315)
T 4asc_A           96 E-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP  172 (315)
T ss_dssp             E-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred             E-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeC
Confidence            2 256666666632        45888999887765322211 11111112235566666664 2     24666654

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=90.61  E-value=0.59  Score=29.18  Aligned_cols=93  Identities=10%  Similarity=0.018  Sum_probs=51.9

Q ss_pred             EEEeCCCCceeeeecCC--CCeEEEEEC--C-CCCEEEEE-eCCCcEEEEeCCCCCeEE-eec----cccceEE---EEE
Q psy15612          2 YLQSVSPGRQLQQHDFS--SQIFSLGYC--P-SGEWLAVG-MENSNVEVLHALKPDKYQ-LHL----HESCVLS---LRF   67 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~--~~v~~~~~~--~-~~~~l~~~-~~~~~v~~~~~~~~~~~~-~~~----~~~~v~~---~~~   67 (131)
                      +-.|.++|+.+..+...  .++....-.  + ++..++.. ..||.+..++..++...- +..    ..+++..   ...
T Consensus        23 ~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv  102 (339)
T 2be1_A           23 HAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVV  102 (339)
T ss_dssp             EEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC---
T ss_pred             EEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCcee
Confidence            45677888888777433  233221111  1 22333333 578999999987764321 111    1111111   000


Q ss_pred             -----ccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         68 -----AACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        68 -----~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                           +..+..+++++.++.+...|..+|+.+
T Consensus       103 ~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~  134 (339)
T 2be1_A          103 NDSGKIVEDEKVYTGSMRTIMYTINMLNGEII  134 (339)
T ss_dssp             -------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred             ecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence                 013556788999999999999999988

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=90.48  E-value=2.5  Score=27.51  Aligned_cols=53  Identities=8%  Similarity=0.041  Sum_probs=36.1

Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-Ee-cC-------CCCCeEEEEECCC
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQ-SK-------ESSSVLSCDISAD  111 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~-~~-------~~~~v~~~~~~~~  111 (131)
                      -.....++|.|+|+.+++-...+.|.+++..+++.. .. ..       .......++|+|+
T Consensus        26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd   87 (454)
T 1cru_A           26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (454)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence            345679999999997776655557888876655543 11 11       2356779999995

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=90.37  E-value=2.2  Score=26.77  Aligned_cols=55  Identities=15%  Similarity=0.121  Sum_probs=39.3

Q ss_pred             ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe-------cCCCCCeEEEEECCC
Q psy15612         57 LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-------SKESSSVLSCDISAD  111 (131)
Q Consensus        57 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-------~~~~~~v~~~~~~~~  111 (131)
                      ..-.....++|.|||+.+++--..+.|++++..+++....       .........++++|+
T Consensus        29 ~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd   90 (347)
T 3das_A           29 TGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD   90 (347)
T ss_dssp             CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred             cCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence            3345678999999999777665588999998766654311       123466789999995

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=89.96  E-value=2.1  Score=25.92  Aligned_cols=126  Identities=12%  Similarity=-0.039  Sum_probs=62.0

Q ss_pred             EEEeCCCCceeee-ecC-CCCeEEEEECCCCCEEEEEeCC----C-------cEEEEeCCCCCeEEeec---cccceEEE
Q psy15612          2 YLQSVSPGRQLQQ-HDF-SSQIFSLGYCPSGEWLAVGMEN----S-------NVEVLHALKPDKYQLHL---HESCVLSL   65 (131)
Q Consensus         2 ~iwd~~~~~~~~~-~~~-~~~v~~~~~~~~~~~l~~~~~~----~-------~v~~~~~~~~~~~~~~~---~~~~v~~~   65 (131)
                      ..||..+++-... ... ..+........++..++.|+..    +       .+..+|..+.+-..+..   .......+
T Consensus        27 ~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~  106 (318)
T 2woz_A           27 VAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLG  106 (318)
T ss_dssp             EEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEE
T ss_pred             EEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceE
Confidence            4677776654331 111 2222333345567777777731    1       16778887766443321   11111222


Q ss_pred             EEccCCCEEEEeCCC-------CeEEEeeCCCCceEEecCCCCCe-EEEEECCCCCEEEEecCC------CcEEEEEe
Q psy15612         66 RFAACGKWFVSTGKD-------NLLNAWRTPYGASIFQSKESSSV-LSCDISADDKYIVTGSGD------KKATVYEV  129 (131)
Q Consensus        66 ~~~~~~~~~~~~~~~-------~~i~~w~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d------~~i~vw~~  129 (131)
                      ..  +++.++.|+.+       ..+.+||..+.+.......+... ...+...++++++.|+.+      ..+.++|+
T Consensus       107 ~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~  182 (318)
T 2woz_A          107 EV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP  182 (318)
T ss_dssp             EE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred             EE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence            22  56666666543       34788898887766332222111 111112356666666531      24666664

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=89.93  E-value=2.2  Score=26.14  Aligned_cols=105  Identities=12%  Similarity=0.101  Sum_probs=60.9

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEE-eCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVL-HALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      ....+..+.+.|++..++.+. .+.+..- |-....-..+ ......+..+.+.++++.++.+ .++.+...+...++.-
T Consensus       161 ~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G~tW  238 (327)
T 2xbg_A          161 AIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNSENW  238 (327)
T ss_dssp             CCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEEEEE
T ss_pred             CCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEe-CCceEEEecCCCCCee
Confidence            445688899999888776664 4444443 3212222222 2334567888899988766554 4666666542223322


Q ss_pred             -Ee-cC---CCCCeEEEEECCCCCEEEEecCCCcE
Q psy15612         95 -FQ-SK---ESSSVLSCDISADDKYIVTGSGDKKA  124 (131)
Q Consensus        95 -~~-~~---~~~~v~~~~~~~~~~~l~~~~~d~~i  124 (131)
                       .. .+   ....+..+.+.++++.++.+. ++.+
T Consensus       239 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i  272 (327)
T 2xbg_A          239 GELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL  272 (327)
T ss_dssp             CCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred             EeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence             11 11   234578899988877776654 4544

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=89.10  E-value=3.9  Score=27.78  Aligned_cols=59  Identities=10%  Similarity=0.084  Sum_probs=41.4

Q ss_pred             CCeEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCCeEEeec--cccceEEEEEccCCCEEEEe
Q psy15612         19 SQIFSLGYCPSGEWLAVGMEN------------SNVEVLHALKPDKYQLHL--HESCVLSLRFAACGKWFVST   77 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~------------~~v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~   77 (131)
                      .....+.|.++|.+.+.....            ..+..++..++++..+..  ...++..++|+||++.|++.
T Consensus       476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~  548 (592)
T 4a9v_A          476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence            456789999999877744321            246667777777655432  23578999999999987765

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=88.79  E-value=2.6  Score=25.48  Aligned_cols=65  Identities=11%  Similarity=0.026  Sum_probs=37.1

Q ss_pred             CCCEEEEEeCC-------CcEEEEeCCCCCeEEeeccccc--eEEEEEccCCCEEEEeCC------CCeEEEeeCCCCce
Q psy15612         29 SGEWLAVGMEN-------SNVEVLHALKPDKYQLHLHESC--VLSLRFAACGKWFVSTGK------DNLLNAWRTPYGAS   93 (131)
Q Consensus        29 ~~~~l~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~~------~~~i~~w~~~~~~~   93 (131)
                      +++.++.|+.+       ..+.+||..+.+-..+...+..  -..+.. .+++.++.++.      .+.+.+||+.+.+.
T Consensus       109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W  187 (318)
T 2woz_A          109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW  187 (318)
T ss_dssp             TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred             CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence            56666666653       2477888887764433221111  112222 35666666654      24588999988876


Q ss_pred             E
Q psy15612         94 I   94 (131)
Q Consensus        94 ~   94 (131)
                      .
T Consensus       188 ~  188 (318)
T 2woz_A          188 K  188 (318)
T ss_dssp             E
T ss_pred             E
Confidence            6

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=87.66  E-value=0.66  Score=33.77  Aligned_cols=33  Identities=15%  Similarity=0.162  Sum_probs=27.9

Q ss_pred             eEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         62 VLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        62 v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      +.++...++..++++-+.|+++++|++.+++++
T Consensus       240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v  272 (1139)
T 4fhn_B          240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV  272 (1139)
T ss_dssp             BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEE
T ss_pred             eEEeeccCCccEEEEEeCCCEEEEEECCCCCeE
Confidence            445556678889999999999999999999887

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=84.70  E-value=1.5  Score=27.43  Aligned_cols=64  Identities=5%  Similarity=-0.065  Sum_probs=36.6

Q ss_pred             CEEEEEeCCCcEEEEeCCCCCeEEe-ecc-ccceEEEEE--cc-CCCEEEEe-CCCCeEEEeeCCCCceE
Q psy15612         31 EWLAVGMENSNVEVLHALKPDKYQL-HLH-ESCVLSLRF--AA-CGKWFVST-GKDNLLNAWRTPYGASI   94 (131)
Q Consensus        31 ~~l~~~~~~~~v~~~~~~~~~~~~~-~~~-~~~v~~~~~--~~-~~~~~~~~-~~~~~i~~w~~~~~~~~   94 (131)
                      ..++.++.||.|.-+|..+++..=. ... ..++....-  .+ ++..++.. ..||.+..++..+|...
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~   80 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK   80 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence            3677788889888888887775221 111 112211110  01 22333333 67999999998887554

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=84.35  E-value=1.9  Score=30.89  Aligned_cols=33  Identities=15%  Similarity=0.086  Sum_probs=28.8

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK   52 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~   52 (131)
                      .+.++...++..++++-+.|+++++|++.++.+
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~  269 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC  269 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence            467777888888999999999999999998875

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=83.31  E-value=7.8  Score=25.67  Aligned_cols=125  Identities=6%  Similarity=0.073  Sum_probs=73.3

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCC--C-CEEEEEeCC---CcEEEEeCCCC---C--e--EEe----e--ccccce
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPS--G-EWLAVGMEN---SNVEVLHALKP---D--K--YQL----H--LHESCV   62 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~~~~~~---~~v~~~~~~~~---~--~--~~~----~--~~~~~v   62 (131)
                      .+|..+.+.....-+|.+.-..+....+  . +.++.+...   +++++.++...   .  .  ...    .  .....+
T Consensus       182 QLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFP  261 (494)
T 1bpo_A          182 QLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP  261 (494)
T ss_dssp             EEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCE
T ss_pred             EEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCce
Confidence            4666665444433356555544444321  1 233334332   68899888543   1  1  111    1  123346


Q ss_pred             EEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe-cCCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612         63 LSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISADDKYIVTGSGDKKATV  126 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  126 (131)
                      ..+..++.-..++.-+.-|.++++|+.++.+++. .-....|...+-+....-++.....|.|.-
T Consensus       262 vamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~  326 (494)
T 1bpo_A          262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS  326 (494)
T ss_dssp             EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEE
T ss_pred             eEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEE
Confidence            6788888888888888999999999999999943 335556655555544444545556665543

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=81.31  E-value=2.4  Score=29.49  Aligned_cols=31  Identities=13%  Similarity=0.241  Sum_probs=25.5

Q ss_pred             eEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         62 VLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        62 v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      |.++.+  +..++++-+.|+++++|++.+++++
T Consensus       224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv  254 (729)
T 3f7f_A          224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLI  254 (729)
T ss_dssp             EEEEEE--TTTEEEEEETTCEEEEEETTTTEEE
T ss_pred             EEEecc--CCcEEEEEEcCCeEEEEEcCCCceE
Confidence            444444  4779999999999999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	131
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-19
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	6e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-09
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	0.002
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	0.002
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	0.001
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	0.004
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.003
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.004

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (192), Expect = 6e-19
 Identities = 111/119 (93%), Positives = 115/119 (96%)

Query: 13  QQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGK 72
           QQHDF+SQIFSLGYCP+GEWLAVGME+SNVEVLH  KPDKYQLHLHESCVLSL+FA CGK
Sbjct: 219 QQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGK 278

Query: 73  WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY 131
           WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS DDKYIVTGSGDKKATVYEVIY
Sbjct: 279 WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY 337

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.1 bits (131), Expect = 1e-10
 Identities = 20/129 (15%), Positives = 48/129 (37%), Gaps = 6/129 (4%)

Query: 3   LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESC- 61
           ++     +    H   S I ++ + P+G   A G +++   +       +   + H++  
Sbjct: 213 VREGMCRQTFTGH--ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII 270

Query: 62  --VLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISADDKYIVTG 118
             + S+ F+  G+  ++   D   N W           +   + V    ++ D   + TG
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330

Query: 119 SGDKKATVY 127
           S D    ++
Sbjct: 331 SWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.0 bits (97), Expect = 6e-06
 Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 3/81 (3%)

Query: 52  KYQLHLHESCVLSLRFAACGKWFVSTGKDN---LLNAWRTPYGASIFQSKESSSVLSCDI 108
           +     HES + ++ F   G  F +   D    L +        +         + S   
Sbjct: 219 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278

Query: 109 SADDKYIVTGSGDKKATVYEV 129
           S   + ++ G  D    V++ 
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDA 299

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.3 bits (121), Expect = 3e-09
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 2/108 (1%)

Query: 23  SLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDN 81
           +      G +L  G  +  +++           L  H++ V  + F + GK+ +S   D 
Sbjct: 210 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 269

Query: 82  LLNAWRTPYGASIFQSKE-SSSVLSCDISADDKYIVTGSGDKKATVYE 128
            L  W       +         V S D      Y+VTGS D+   V+E
Sbjct: 270 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (78), Expect = 0.002
 Identities = 14/58 (24%), Positives = 20/58 (34%)

Query: 49  KPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSC 106
            P+KY L  H S V  + F       VS  +D  +  W    G      K  +  +  
Sbjct: 7   PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (77), Expect = 0.002
 Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 51  DKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDIS 109
             Y      +   + +    G + +S  +D  +  W    G  +       + V      
Sbjct: 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 256

Query: 110 ADDKYIVTGSGDKKATVYEV 129
           +  K+I++ + DK   V++ 
Sbjct: 257 SGGKFILSCADDKTLRVWDY 276

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.7 bits (109), Expect = 1e-07
 Identities = 23/132 (17%), Positives = 50/132 (37%), Gaps = 20/132 (15%)

Query: 18  SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-------------YQLHLHESCVLS 64
              ++S+ +   G+ +  G  + +V++ +    +                   H+  VLS
Sbjct: 254 KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 313

Query: 65  LRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDI------SADDKYIVT 117
           +      ++ +S  KD  +  W    G  +   +   +SV+S  +        +     T
Sbjct: 314 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFAT 373

Query: 118 GSGDKKATVYEV 129
           GSGD KA +++ 
Sbjct: 374 GSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.6 bits (101), Expect = 1e-06
 Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 21/138 (15%)

Query: 13  QQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHA--------LKPDKYQLHLHESCVLS 64
                            G+++A G  +  V V  +        L  +      H+  V S
Sbjct: 200 TLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 259

Query: 65  LRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-------------SKESSSVLSCDISAD 111
           + F   G+  VS   D  +  W      +                      VLS   + +
Sbjct: 260 VVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN 319

Query: 112 DKYIVTGSGDKKATVYEV 129
           D+YI++GS D+    ++ 
Sbjct: 320 DEYILSGSKDRGVLFWDK 337

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.5 bits (90), Expect = 5e-05
 Identities = 15/80 (18%), Positives = 24/80 (30%), Gaps = 4/80 (5%)

Query: 15 HDFSSQ-IFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---HESCVLSLRFAAC 70
          H F  + I    +      +A+   N  V +         Q+H    H   V  + +A  
Sbjct: 3  HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD 62

Query: 71 GKWFVSTGKDNLLNAWRTPY 90
              V+ G D     W    
Sbjct: 63 SNRIVTCGTDRNAYVWTLKG 82

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.9 bits (86), Expect = 1e-04
 Identities = 9/79 (11%), Positives = 23/79 (29%), Gaps = 3/79 (3%)

Query: 56  HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISADD 112
                 +    +            ++ ++ +       +   +    +  V   D + D 
Sbjct: 4   SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63

Query: 113 KYIVTGSGDKKATVYEVIY 131
             IVT   D+ A V+ +  
Sbjct: 64  NRIVTCGTDRNAYVWTLKG 82

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 35.6 bits (80), Expect = 0.001
 Identities = 7/72 (9%), Positives = 22/72 (30%), Gaps = 3/72 (4%)

Query: 58  HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVT 117
                          ++    +  +L  +          ++  +++    +SAD K ++ 
Sbjct: 275 SILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK---VTEVKNNLTDLRLSADRKTVMV 331

Query: 118 GSGDKKATVYEV 129
              D K   + +
Sbjct: 332 RKDDGKIYTFPL 343

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 33.7 bits (75), Expect = 0.004
 Identities = 15/94 (15%), Positives = 26/94 (27%)

Query: 1   MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHES 60
               +V PG         S I        GE+ A         VL        ++   ++
Sbjct: 256 SSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKN 315

Query: 61  CVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI 94
            +  LR +A  K  +    D  +  +        
Sbjct: 316 NLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDE 349

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.1 bits (76), Expect = 0.003
 Identities = 6/68 (8%), Positives = 18/68 (26%), Gaps = 4/68 (5%)

Query: 58  HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKE----SSSVLSCDISADDK 113
            +  +  ++        + T  D  L  ++    A      +       +L C+   +  
Sbjct: 10  PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD 69

Query: 114 YIVTGSGD 121
             +     
Sbjct: 70  LQIYVGTV 77

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 33.8 bits (75), Expect = 0.004
 Identities = 10/65 (15%), Positives = 22/65 (33%), Gaps = 3/65 (4%)

Query: 70  CGKWFVSTGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISADDKYIVTGSGDKKATV 126
                 +   DN +  W     +    I +   + S ++  I  ++  IV+   D     
Sbjct: 235 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKF 294

Query: 127 YEVIY 131
           + V +
Sbjct: 295 WNVPF 299

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	131
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.97
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.96
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.96
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.95
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.95
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.95
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.95
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.95
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.94
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.94
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.93
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.93
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.93
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.92
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.92
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.92
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.92
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.91
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.91
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.89
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.89
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.88
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.87
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.87
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.85
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.84
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.84
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.82
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.81
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.8
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.79
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.75
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.75
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.75
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.72
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.7
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.69
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.69
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.67
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.61
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.58
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.5
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.39
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.34
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.3
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.27
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.25
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.23
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.2
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.19
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.18
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.99
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.98
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.93
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.93
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.9
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.9
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.87
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.8
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.76
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.58
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.56
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.54
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.47
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.44
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.4
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.13
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.12
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.11
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.1
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.08
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.03
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.85
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.45
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.31
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.89
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	96.38
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.37
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	95.78
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	95.54
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.49
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	95.38
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	95.19
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	95.19
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.06
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	94.86
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	94.8
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	94.42
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	94.32
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	94.13
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	93.74
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	93.03
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	92.61
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	91.87
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	91.69
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	89.36
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	87.58
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	87.05

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-31  Score=162.27  Aligned_cols=131  Identities=88%  Similarity=1.381  Sum_probs=124.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKD   80 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   80 (131)
                      |++||+++++.+..+.+...|.+++|+|+++.+++++.++.+++||+.+........|...|.+++|+|+++++++++.|
T Consensus       207 v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~D  286 (337)
T d1gxra_         207 VRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD  286 (337)
T ss_dssp             EEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccccccccceeecccccccceEEEEEcccccccceeccccccccccccccccccccccccccceEEECCCCCEEEEEeCC
Confidence            57999999999988899999999999999999999999999999999998887788899999999999999999999999


Q ss_pred             CeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         81 NLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        81 ~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      +.|++||..+++.+....|...|.+++|+|++++|++++.|++|++||+.|
T Consensus       287 g~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl~~  337 (337)
T d1gxra_         287 NLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY  337 (337)
T ss_dssp             SEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEEC
T ss_pred             CeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEEEC
Confidence            999999999999887777889999999999999999999999999999998

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=8.9e-30  Score=153.55  Aligned_cols=128  Identities=17%  Similarity=0.238  Sum_probs=116.5

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE---eeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ---LHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |++||+++++.+..+ .|...|.+++|+|+++.|++++.|+.+++|++.......   ...+...+.+++|+|+++++++
T Consensus       208 v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  287 (340)
T d1tbga_         208 AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA  287 (340)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEE
T ss_pred             EEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEE
Confidence            579999999998888 789999999999999999999999999999998776532   2356677999999999999999


Q ss_pred             eCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         77 TGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        77 ~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ++.|+.|++||+.+++.+ ...+|.+.|.+++|+|++++|++++.|+.|++||
T Consensus       288 g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            999999999999999888 6677999999999999999999999999999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=7.1e-28  Score=145.14  Aligned_cols=130  Identities=21%  Similarity=0.260  Sum_probs=114.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEe
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~   77 (131)
                      +++|++++++....+ .|...|.+++|+|+++. +++|+.|+.|++||+++.+. .....|...|.++.|+|++++++++
T Consensus       128 ~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~  207 (311)
T d1nr0a1         128 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST  207 (311)
T ss_dssp             EEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             ccccccccccccccccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCccccccccc
Confidence            368999998888777 78899999999999885 78899999999999998775 5567789999999999999999999


Q ss_pred             CCCCeEEEeeCCCCceEE--------ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         78 GKDNLLNAWRTPYGASIF--------QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +.|+.+++||..++....        ..+|...|.+++|+|++++|++++.|+.|++||++
T Consensus       208 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~  268 (311)
T d1nr0a1         208 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA  268 (311)
T ss_dssp             ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             cccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence            999999999999887651        22477889999999999999999999999999964

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=3.3e-27  Score=142.21  Aligned_cols=130  Identities=18%  Similarity=0.255  Sum_probs=114.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~   76 (131)
                      |.+||+++.+....+ +|...|.+++|+|+|++|++|+.|++|++||+.+...   ..+..|...|.+++|+|+++.+++
T Consensus        40 v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~  119 (311)
T d1nr0a1          40 VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAA  119 (311)
T ss_dssp             EEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEE
T ss_pred             EEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccccccc
Confidence            468999988888777 8999999999999999999999999999999987653   446778999999999999999988


Q ss_pred             eCC--CCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCE-EEEecCCCcEEEEEee
Q psy15612         77 TGK--DNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKY-IVTGSGDKKATVYEVI  130 (131)
Q Consensus        77 ~~~--~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~vw~~~  130 (131)
                      ++.  +..+++|++.+++.. .+..|...|.+++|+|++++ +++++.|+.|++||++
T Consensus       120 ~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~  177 (311)
T d1nr0a1         120 VGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP  177 (311)
T ss_dssp             EECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT
T ss_pred             ccccccccccccccccccccccccccccccccccccccceeeeccccccccccccccc
Confidence            865  456899999988877 66678899999999999885 7789999999999974

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=2.8e-27  Score=145.22  Aligned_cols=130  Identities=15%  Similarity=0.173  Sum_probs=112.1

Q ss_pred             CEEEeCCCCc--eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGR--QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~   74 (131)
                      |++||.++++  .+..+ +|.+.|.+++|+|++++|++++.|+.+++||+.+...   ..+..|...+.+++|+|+++.+
T Consensus        31 i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l  110 (371)
T d1k8kc_          31 VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKF  110 (371)
T ss_dssp             EEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEE
T ss_pred             EEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccc
Confidence            5899998775  44555 7999999999999999999999999999999987663   3345678899999999999999


Q ss_pred             EEeCCCCeEEEeeCCCCceE-----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         75 VSTGKDNLLNAWRTPYGASI-----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++++.++.+++|++......     ....+...|.+++|+|++++|++++.|+.+++||+.
T Consensus       111 ~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~  171 (371)
T d1k8kc_         111 AVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY  171 (371)
T ss_dssp             EEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred             eeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEEeec
Confidence            99999999999988765432     345678899999999999999999999999999964

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=6e-27  Score=139.69  Aligned_cols=130  Identities=15%  Similarity=0.179  Sum_probs=106.8

Q ss_pred             CEEEeCCCCceee--eecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQ--QHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~   74 (131)
                      |++||+++++...  ...|...|.+++|+|+++++++++.++.+++||+.++..    ..+..|...|.+++|+|+++++
T Consensus       160 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l  239 (299)
T d1nr0a2         160 VHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL  239 (299)
T ss_dssp             EEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce
Confidence            5789998776543  347889999999999999999999999999999987653    3346688899999999999999


Q ss_pred             EEeCCCCeEEEeeCCCCceE---EecCC-CCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         75 VSTGKDNLLNAWRTPYGASI---FQSKE-SSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~---~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      ++++.|+.+++||+.++...   ....+ ...+.++.+ +++++|++++.|+.|++||+-|
T Consensus       240 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~~  299 (299)
T d1nr0a2         240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVPF  299 (299)
T ss_dssp             EEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECCC
T ss_pred             EEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEeccC
Confidence            99999999999999876543   22333 445666654 5678899999999999999976

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=3.4e-26  Score=140.33  Aligned_cols=130  Identities=18%  Similarity=0.308  Sum_probs=110.7

Q ss_pred             CEEEeCCCCceeeee--------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-------------EEeeccc
Q psy15612          1 MYLQSVSPGRQLQQH--------DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-------------YQLHLHE   59 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-------------~~~~~~~   59 (131)
                      |++||.++++....+        .|...|.+++|+|+++.|++++.|+.+++||+.+...             .....|.
T Consensus       229 i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (388)
T d1erja_         229 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK  308 (388)
T ss_dssp             EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCS
T ss_pred             EEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeeccccc
Confidence            578999988776554        4678899999999999999999999999999875431             2345678


Q ss_pred             cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEE------CCCCCEEEEecCCCcEEEEEee
Q psy15612         60 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDI------SADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~------~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ..+.+++|+|+++++++++.|+.|++||+.+++.+ ...+|.+.|.++++      +|++++|++++.|++|++||++
T Consensus       309 ~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         309 DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             ceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            88999999999999999999999999999999988 67789999999875      6789999999999999999985

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=4e-26  Score=135.84  Aligned_cols=128  Identities=20%  Similarity=0.300  Sum_probs=115.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCC--------------------CEEEEEeCCCcEEEEeCCCCCe-EEeecc
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSG--------------------EWLAVGMENSNVEVLHALKPDK-YQLHLH   58 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~--------------------~~l~~~~~~~~v~~~~~~~~~~-~~~~~~   58 (131)
                      |++|+..+++....+ .+...+..+.++|++                    ..+++++.|+.+++|++.+++. ..+..|
T Consensus       167 v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~  246 (317)
T d1vyhc1         167 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH  246 (317)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             EEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCC
Confidence            578999999888877 788889999998754                    3578899999999999998875 667889


Q ss_pred             ccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         59 ESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        59 ~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ...+.+++|+|+++++++++.|+.|++||+.+++.+ ...+|.+.|.+++|+|++++|++++.|++|++||
T Consensus       247 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         247 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            999999999999999999999999999999998887 6678999999999999999999999999999997

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-25  Score=136.20  Aligned_cols=130  Identities=15%  Similarity=0.161  Sum_probs=119.7

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK   79 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (131)
                      |++||+++++..... .|...+.+++|++++..+++++.++.+++||+++++......+...+.+++|+|+++.+++++.
T Consensus       165 i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~  244 (337)
T d1gxra_         165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME  244 (337)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccceeecccccccceEEEEEcccccccceecc
Confidence            578999998887776 7889999999999999999999999999999998887666678889999999999999999999


Q ss_pred             CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++.+++||+.+++......|...|.+++|+|++++|++++.|+.|++||+.
T Consensus       245 d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~  295 (337)
T d1gxra_         245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP  295 (337)
T ss_dssp             TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             ccccccccccccccccccccccccceEEECCCCCEEEEEeCCCeEEEEECC
Confidence            999999999988888777899999999999999999999999999999964

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=9.8e-26  Score=133.78  Aligned_cols=128  Identities=9%  Similarity=0.072  Sum_probs=107.4

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE--EeeccccceEEEEEccC------
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY--QLHLHESCVLSLRFAAC------   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~v~~~~~~~~------   70 (131)
                      |++|++.+.+....+  .+...+.+++|+|++.+|++++.++.+++||+.++...  ....|...|.+++|+|+      
T Consensus       143 v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~  222 (287)
T d1pgua2         143 IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANE  222 (287)
T ss_dssp             EEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-----
T ss_pred             eeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeeccccccccc
Confidence            478888766555444  57788999999999999999999999999999887753  35678899999999874      


Q ss_pred             ----CCEEEEeCCCCeEEEeeCCCCce-E-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         71 ----GKWFVSTGKDNLLNAWRTPYGAS-I-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        71 ----~~~~~~~~~~~~i~~w~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                          +.++++++.|+.+++||++++.. . ...+|.+.|.+++|+|++ .+++++.|+.|++|++
T Consensus       223 ~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         223 EEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             -CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             ccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence                46899999999999999987443 3 556799999999999986 4778889999999997

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.94  E-value=2.8e-25  Score=136.28  Aligned_cols=113  Identities=14%  Similarity=0.151  Sum_probs=101.3

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      .++|.+++|+|++++|++++.++.|++|+..+++.   ..+.+|...|.+++|+|+++++++++.|+.+++||+.++...
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~   86 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK   86 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccc
Confidence            36799999999999999999999999999987753   456789999999999999999999999999999999877654


Q ss_pred             ---EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 ---FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 ---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                         ....+...+.+++|+|+++++++++.|+.+++|++.
T Consensus        87 ~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~  125 (371)
T d1k8kc_          87 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE  125 (371)
T ss_dssp             EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEE
T ss_pred             cccccccccccccccccccccccceeecccCcceeeeee
Confidence               445678899999999999999999999999999874

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.8e-25  Score=138.04  Aligned_cols=113  Identities=19%  Similarity=0.276  Sum_probs=96.3

Q ss_pred             CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-E------EeeccccceEEEEEccCCCEEEEeCCCC---eEEEe
Q psy15612         17 FSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-Y------QLHLHESCVLSLRFAACGKWFVSTGKDN---LLNAW   86 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~------~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~i~~w   86 (131)
                      +...+.+++|+|++ ++++|+.|+.|++||+.+++. .      .+.+|...|.+++|+|+|++|++++.|+   .+++|
T Consensus       183 ~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lw  261 (393)
T d1sq9a_         183 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY  261 (393)
T ss_dssp             SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred             CCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeec
Confidence            44568899999987 889999999999999988764 2      2346888999999999999999999887   48999


Q ss_pred             eCCCCceE-Ee-------------cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         87 RTPYGASI-FQ-------------SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        87 ~~~~~~~~-~~-------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |+.+++.+ .+             .+|...|.+++|+|++++|++++.|++|++||+.
T Consensus       262 d~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~  319 (393)
T d1sq9a_         262 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK  319 (393)
T ss_dssp             ETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred             ccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECC
Confidence            99988776 22             2688999999999999999999999999999973

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=4.7e-24  Score=128.28  Aligned_cols=130  Identities=15%  Similarity=0.236  Sum_probs=106.4

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC--------------------------------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHA--------------------------------   47 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~--------------------------------   47 (131)
                      |++||+.+++.+..+ .|...|.+++|+|++.++++++.++.+.+|+.                                
T Consensus        79 v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (340)
T d1tbga_          79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV  158 (340)
T ss_dssp             EEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEE
T ss_pred             eeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecccccccccccccceecccccccccccccccccccc
Confidence            578999988888777 68888999999999888888877766665553                                


Q ss_pred             -------------------------------------------------------CCCCe-EEeeccccceEEEEEccCC
Q psy15612         48 -------------------------------------------------------LKPDK-YQLHLHESCVLSLRFAACG   71 (131)
Q Consensus        48 -------------------------------------------------------~~~~~-~~~~~~~~~v~~~~~~~~~   71 (131)
                                                                             .+++. ..+..|...|.+++|+|++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~  238 (340)
T d1tbga_         159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG  238 (340)
T ss_dssp             EEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred             cccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCC
Confidence                                                                   32222 2234577889999999999


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceEE---ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASIF---QSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +++++++.|+.+++|++...+...   ...+...+.+++|+|+++++++++.|+.|++||+.
T Consensus       239 ~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~  300 (340)
T d1tbga_         239 NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL  300 (340)
T ss_dssp             SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETT
T ss_pred             CEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECC
Confidence            999999999999999999887762   23466789999999999999999999999999964

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.6e-24  Score=133.73  Aligned_cols=129  Identities=19%  Similarity=0.277  Sum_probs=103.6

Q ss_pred             CEEEeCCCCceeeee-------cCCCCeEEEEECCCCCEEEEEeCCCc---EEEEeCCCCCe-EE-------------ee
Q psy15612          1 MYLQSVSPGRQLQQH-------DFSSQIFSLGYCPSGEWLAVGMENSN---VEVLHALKPDK-YQ-------------LH   56 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~~~---v~~~~~~~~~~-~~-------------~~   56 (131)
                      |++||+++++.+..+       +|...|.+++|+|++++|++++.|++   +++||+.+++. ..             ..
T Consensus       207 i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~  286 (393)
T d1sq9a_         207 VQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEF  286 (393)
T ss_dssp             EEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCB
T ss_pred             EEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeee
Confidence            689999998877543       57889999999999999999998874   89999987764 22             23


Q ss_pred             ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCC---------------------CeEEEEECCCC--
Q psy15612         57 LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESS---------------------SVLSCDISADD--  112 (131)
Q Consensus        57 ~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~---------------------~v~~~~~~~~~--  112 (131)
                      +|...|.+++|+|++++|++++.|+.|++||+.+++++ .+.+|.+                     .+.++.|.+.+  
T Consensus       287 gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (393)
T d1sq9a_         287 AHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWR  366 (393)
T ss_dssp             SBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTS
T ss_pred             cccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcccceEEECccCce
Confidence            68899999999999999999999999999999999887 4455533                     34556554432  


Q ss_pred             --------CEEEEecCCCcEEEEEe
Q psy15612        113 --------KYIVTGSGDKKATVYEV  129 (131)
Q Consensus       113 --------~~l~~~~~d~~i~vw~~  129 (131)
                              +.+++++.|+.+++|.-
T Consensus       367 ~~~~~~~~~~~~~~~~d~~ir~~~~  391 (393)
T d1sq9a_         367 SGMGADLNESLCCVCLDRSIRWFRE  391 (393)
T ss_dssp             BSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred             eccccCCCCEEEEEEcCCeEEEEeC
Confidence                    34778888899998864

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.92  E-value=1.6e-23  Score=124.77  Aligned_cols=115  Identities=18%  Similarity=0.242  Sum_probs=101.1

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE--EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCce
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY--QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGAS   93 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~   93 (131)
                      .....+.+++|+|+++.+++++.++.+.+||+.+....  ....|...|.+++|+|+++++++++.++.+++||..++..
T Consensus       134 ~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~  213 (299)
T d1nr0a2         134 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE  213 (299)
T ss_dssp             ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34556889999999999999999999999999887753  3456888999999999999999999999999999988766


Q ss_pred             E----EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         94 I----FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        94 ~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .    ....|...|.+++|+|+++++++++.|+.|++||+.
T Consensus       214 ~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~  254 (299)
T d1nr0a2         214 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN  254 (299)
T ss_dssp             ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             ccccccccccccccccccccccccceEEEcCCCEEEEEECC
Confidence            5    334578999999999999999999999999999974

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=4.3e-23  Score=122.60  Aligned_cols=130  Identities=15%  Similarity=0.232  Sum_probs=116.0

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCC-------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACG-------   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-------   71 (131)
                      +++||+++++.+..+ .|...+.+++|+|++..+++++.|+.+++|+..+... ..+..+...+.++.|+|++       
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  204 (317)
T d1vyhc1         125 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISE  204 (317)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred             eeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeec
Confidence            478999999988887 7889999999999999999999999999999998875 5567788888888887754       


Q ss_pred             -------------CEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         72 -------------KWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        72 -------------~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                                   ..+++++.|+.+++||..+++.+ ....|...+.+++|+|++++|++++.|+.|++||+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  277 (317)
T d1vyhc1         205 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK  277 (317)
T ss_dssp             CCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred             cccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence                         46888999999999999999887 667789999999999999999999999999999974

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=4.6e-23  Score=126.30  Aligned_cols=128  Identities=20%  Similarity=0.380  Sum_probs=107.4

Q ss_pred             EEEeCCCCcee-----eeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEe------------------ec
Q psy15612          2 YLQSVSPGRQL-----QQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQL------------------HL   57 (131)
Q Consensus         2 ~iwd~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~------------------~~   57 (131)
                      .+|+....+..     ..++|.+.|.+++|+|+|++|++|+ |+.|++|++.+++. ..+                  ..
T Consensus        41 ~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (388)
T d1erja_          41 ILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS  119 (388)
T ss_dssp             EEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------C
T ss_pred             EEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccC
Confidence            35665544322     2347999999999999999999986 88999999987663 211                  24


Q ss_pred             cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         58 HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        58 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |...|.+++|+|+++++++++.|+.+++||...++.. ...+|...|.++++++++..+++++.++.+++||+.
T Consensus       120 ~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~  193 (388)
T d1erja_         120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR  193 (388)
T ss_dssp             CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             CCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeecc
Confidence            5667999999999999999999999999999998887 667799999999999999999999999999999864

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.2e-23  Score=127.07  Aligned_cols=129  Identities=16%  Similarity=0.192  Sum_probs=106.2

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCe-EE---eeccccceEEEEEccC-CCEE
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEW-LAVGMENSNVEVLHALKPDK-YQ---LHLHESCVLSLRFAAC-GKWF   74 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~-l~~~~~~~~v~~~~~~~~~~-~~---~~~~~~~v~~~~~~~~-~~~~   74 (131)
                      ++|+.++++.+..+ +|...|.+++|+|++.. +++++.|+.+++|+....+. ..   ...|...|.+++|+|+ +.++
T Consensus       142 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l  221 (325)
T d1pgua1         142 VFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFV  221 (325)
T ss_dssp             EEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEE
T ss_pred             EEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceec
Confidence            57888888888887 78999999999998875 67789999999999987664 22   2456778999999996 6789


Q ss_pred             EEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEEC---CCCCEEEEecCCCcEEEEEee
Q psy15612         75 VSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDIS---ADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        75 ~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ++++.|+.|++||.++++.+ .+..|...+..+.|+   |++++|++++.|+.|++||+.
T Consensus       222 ~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~  281 (325)
T d1pgua1         222 ITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT  281 (325)
T ss_dssp             EEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred             cccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECC
Confidence            99999999999999999887 555566555444444   688999999999999999974

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.7e-23  Score=126.43  Aligned_cols=129  Identities=14%  Similarity=0.174  Sum_probs=99.3

Q ss_pred             CEEEeCCCCceeeee----cCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEc---cCC
Q psy15612          1 MYLQSVSPGRQLQQH----DFSSQIFSLGYCPS-GEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFA---ACG   71 (131)
Q Consensus         1 i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~---~~~   71 (131)
                      |++||.++.+.....    .+...|.+++|+|+ +.++++++.|+.|++||+++++. ..+..|...+..+.|+   |++
T Consensus       184 v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg  263 (325)
T d1pgua1         184 VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDS  263 (325)
T ss_dssp             EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSS
T ss_pred             cccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCC
Confidence            578998877765544    46678999999996 67899999999999999998875 5566677666655555   689


Q ss_pred             CEEEEeCCCCeEEEeeCCCCceE-EecC--CCCCeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy15612         72 KWFVSTGKDNLLNAWRTPYGASI-FQSK--ESSSVLSCDISAD-DKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        72 ~~~~~~~~~~~i~~w~~~~~~~~-~~~~--~~~~v~~~~~~~~-~~~l~~~~~d~~i~vw~~  129 (131)
                      ++|++++.|+.|++||+++++.+ ....  +...+..+++.+. +.++++++.|+.|++||+
T Consensus       264 ~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             SEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             CEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            99999999999999999999887 3332  3333334444432 347889999999999996

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.91  E-value=4.3e-23  Score=125.11  Aligned_cols=128  Identities=13%  Similarity=0.102  Sum_probs=110.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS--NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.++ +.|...|.+++|+|||+.|++++.+.  .+.+||..+++...+..|...+.+++|+|+|+++++++
T Consensus        26 v~v~d~~~~~~~~-~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~  104 (360)
T d1k32a3          26 AFIQDVSGTYVLK-VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAN  104 (360)
T ss_dssp             EEEECTTSSBEEE-CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEE
T ss_pred             EEEEECCCCcEEE-ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeCCCceEEeeeecccccccceec
Confidence            5799998877665 47899999999999999998766543  68999999999888889999999999999999999999


Q ss_pred             CCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEec----------CCCcEEEEEe
Q psy15612         79 KDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTGS----------GDKKATVYEV  129 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~vw~~  129 (131)
                      .++.+.+|+..+++.. ....+...+.+++|+|+|++|+.+.          .++.+++||+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~  166 (360)
T d1k32a3         105 DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM  166 (360)
T ss_dssp             TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred             cccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccceeeecc
Confidence            9999999999988877 5566778889999999999998543          3446888886

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.2e-21  Score=117.48  Aligned_cols=126  Identities=17%  Similarity=0.215  Sum_probs=102.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee---ccccceEEEEEccCCCEEE
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH---LHESCVLSLRFAACGKWFV   75 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~~~   75 (131)
                      |++||+++++.+..+ .|...+.++.++  ++++++++.|+.+++||....+. ..+.   .|...+.++.+  ++++++
T Consensus       199 i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  274 (342)
T d2ovrb2         199 IRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVI  274 (342)
T ss_dssp             EEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEE
T ss_pred             EEEeecccceeeeEecccccceeEEecC--CCEEEEEcCCCEEEEEecccccccccccccceeeeceeeccc--CCCeeE
Confidence            589999999988877 788888888775  56999999999999999988775 3333   34556666655  567999


Q ss_pred             EeCCCCeEEEeeCCCCceEE-e-----cCCCCCeEEEEECCCCCEEEEecCCCc----EEEEEee
Q psy15612         76 STGKDNLLNAWRTPYGASIF-Q-----SKESSSVLSCDISADDKYIVTGSGDKK----ATVYEVI  130 (131)
Q Consensus        76 ~~~~~~~i~~w~~~~~~~~~-~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~----i~vw~~~  130 (131)
                      +++.|+.|++||+++++.+. .     .+|...|.+++|+|++.++++|+.||+    +.+||+.
T Consensus       275 s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~  339 (342)
T d2ovrb2         275 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD  339 (342)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred             EEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCC
Confidence            99999999999999998862 2     246678999999999999999998885    9999974

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=5.9e-22  Score=119.36  Aligned_cols=126  Identities=11%  Similarity=0.182  Sum_probs=100.8

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEE-EEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSL-RFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~   78 (131)
                      |++||.++++.+..+ +|...|.+++++  ++.+++++.|+.|++||+.+.... +..|...+..+ .+++++++++++ 
T Consensus       225 i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g-  300 (355)
T d1nexb2         225 IRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK-FSYHHTNLSAITTFYVSDNILVSG-  300 (355)
T ss_dssp             EEEEETTTCCEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEE-EEEECTTCCCCCEEEECSSEEEEE-
T ss_pred             EEeeeccccccccccccccccccccccc--cceeeeeeccccccccccccccee-cccccCCceEEEEEcCCCCEEEEE-
Confidence            579999999998887 889999999986  468999999999999999877643 33444444444 456777776665 


Q ss_pred             CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEeeC
Q psy15612         79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVIY  131 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~~  131 (131)
                      .|+.|++||+++++.+  ...+|.+.|.+++|+|+ .++++++.||++.+|.+.|
T Consensus       301 ~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~df  354 (355)
T d1nexb2         301 SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEILDF  354 (355)
T ss_dssp             ETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEEEC
T ss_pred             eCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEEeC
Confidence            5899999999999987  45678899999999986 5777888999988776644

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.88  E-value=2.9e-21  Score=116.97  Aligned_cols=129  Identities=9%  Similarity=0.069  Sum_probs=112.9

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC-
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG-   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~-   78 (131)
                      |++||.++++......|...+..++|+|+++.|++++.++.+.+|++.+.+. .....+...+.+++|+|+|++++.+. 
T Consensus        68 v~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~  147 (360)
T d1k32a3          68 LGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFP  147 (360)
T ss_dssp             EEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEE
T ss_pred             EEEEECCCCcEEEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeecc
Confidence            5799999988887779999999999999999999999999999999998886 44566778889999999999998543 


Q ss_pred             ---------CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         79 ---------KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        79 ---------~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                               .++.+++|+..+++......+...+..++|+|+|++|++++.++.+.+||.
T Consensus       148 ~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~  207 (360)
T d1k32a3         148 LKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR  207 (360)
T ss_dssp             ECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred             ccccceeeccccceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEcccc
Confidence                     344689999998888777778888999999999999999999999999974

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=1.1e-20  Score=113.65  Aligned_cols=127  Identities=17%  Similarity=0.265  Sum_probs=104.3

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+... .+...+.++.++|++..+++++.|+.+++|+..++.. ..+..|...|.++.++  ++++++++
T Consensus       183 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~~~  260 (355)
T d1nexb2         183 LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAA  260 (355)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC--SSEEEEEC
T ss_pred             eeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccccc--cceeeeee
Confidence            478999999888777 6788899999999999999999999999999998875 6678899999999886  57899999


Q ss_pred             CCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.|++||+.++.......+........++++++++++++ |+.|++||++
T Consensus       261 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~  311 (355)
T d1nexb2         261 ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR  311 (355)
T ss_dssp             TTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEE-TTEEEEEETT
T ss_pred             cccccccccccccceecccccCCceEEEEEcCCCCEEEEEe-CCEEEEEECC
Confidence            99999999999887664433333333345677888776664 8899999974

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=3.4e-21  Score=115.24  Aligned_cols=120  Identities=13%  Similarity=-0.022  Sum_probs=96.5

Q ss_pred             eeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe----EEeeccccceEEEEEccCC-CEEEEeCCCCeEE
Q psy15612         11 QLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK----YQLHLHESCVLSLRFAACG-KWFVSTGKDNLLN   84 (131)
Q Consensus        11 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~i~   84 (131)
                      .+... +|.+.|.+++|+|++++|++++.|++|++||+.....    .....|...|.+++|+|++ ..+++++.|+.+.
T Consensus         3 ~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~   82 (342)
T d1yfqa_           3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL   82 (342)
T ss_dssp             EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred             eEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccccccee
Confidence            34444 7889999999999999999999999999999976542    3345689999999999864 5788999999999


Q ss_pred             EeeCCCCceE-Ee-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         85 AWRTPYGASI-FQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        85 ~w~~~~~~~~-~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      +|+...+... .. ..+........+.++...+++++.++.+++||++
T Consensus        83 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~  130 (342)
T d1yfqa_          83 KVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPR  130 (342)
T ss_dssp             EECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHH
T ss_pred             eeecccccccccccccccccccccccccccccccccccccccceeecc
Confidence            9999877766 32 2334444555666788889999999999999864

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=8.1e-20  Score=108.05  Aligned_cols=127  Identities=13%  Similarity=0.145  Sum_probs=101.2

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC-cEEEEeCCCCCe-EEe-eccccceEEEEEccCCCEEEEeC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS-NVEVLHALKPDK-YQL-HLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~v~~~~~~~~~~-~~~-~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      .+|+..+++.+..+.....+.  +++|++..+++++.++ .+++|++..... ... ..+...+.+++|+|+++++++++
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~  181 (287)
T d1pgua2         104 LILQSFTGDIIKSVRLNSPGS--AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD  181 (287)
T ss_dssp             EEEETTTCCEEEEEECSSCEE--EEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEE
T ss_pred             eeeeccceeeeeeccccceee--eeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCcccccccc
Confidence            567777777777776555554  4566777887777764 699999875553 222 34677899999999999999999


Q ss_pred             CCCeEEEeeCCCCceE--EecCCCCCeEEEEECCC----------CCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI--FQSKESSSVLSCDISAD----------DKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~----------~~~l~~~~~d~~i~vw~~~  130 (131)
                      .++.+++||+.+++..  ....|...|.+++|+|.          +.++++++.|++|++||+.
T Consensus       182 ~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~  245 (287)
T d1pgua2         182 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK  245 (287)
T ss_dssp             TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred             ccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECC
Confidence            9999999999988876  45678999999999875          4689999999999999974

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.2e-19  Score=106.25  Aligned_cols=124  Identities=16%  Similarity=0.302  Sum_probs=99.1

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||.+..+.+..+ +|...+....+  ++..+++++.|+.+++||+...+. .....|...+.++.++  ++++++++
T Consensus       159 i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~s  234 (342)
T d2ovrb2         159 VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN  234 (342)
T ss_dssp             EEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEE
T ss_pred             EEEeecccceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEEEEc
Confidence            478888888877776 66666665554  788999999999999999998875 5667788888887765  56999999


Q ss_pred             CCCeEEEeeCCCCceE-Eec---CCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         79 KDNLLNAWRTPYGASI-FQS---KESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        79 ~~~~i~~w~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      .|+.+++||....+.. ...   .|...+.++++  +++++++++.||.|++||++
T Consensus       235 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~  288 (342)
T d2ovrb2         235 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLK  288 (342)
T ss_dssp             TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETT
T ss_pred             CCCEEEEEecccccccccccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECC
Confidence            9999999999987766 322   35566666666  46789999999999999974

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.7e-19  Score=105.95  Aligned_cols=122  Identities=16%  Similarity=0.181  Sum_probs=98.6

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeC
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      |++||+++++.+..+ ++...+..+.+  ++..+++++.|+.+++||+.+... .....+...+..  +++++.++++++
T Consensus       160 i~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~sg~  235 (293)
T d1p22a2         160 IKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNKRIVSGA  235 (293)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE--EECCSSEEEEEE
T ss_pred             eeeecCCCCcEEEEEcccccccccccC--CCCeEEEecCCCEEEEEecccceeeeeecccceeeee--ccccceEEEEEc
Confidence            578999999988877 67777877766  467899999999999999998875 445566666654  567889999999


Q ss_pred             CCCeEEEeeCCCC---------ceE-EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         79 KDNLLNAWRTPYG---------ASI-FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        79 ~~~~i~~w~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      .|+.+++||+.++         ... ...+|.+.|.+++|+  +++|++++.|++|++||
T Consensus       236 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         236 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             CCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            9999999996432         222 456789999999994  67899999999999997

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.82  E-value=5.6e-19  Score=110.30  Aligned_cols=129  Identities=13%  Similarity=-0.048  Sum_probs=101.4

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe---EEe---eccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK---YQL---HLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~---~~~---~~~~~~v~~~~~~~~~~~~   74 (131)
                      |.+||.++++++..+.....+..++|+|||+++++++.|+.+.+||+.+.+.   ..+   ..|...+.+..|+|||+++
T Consensus        44 v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l  123 (432)
T d1qksa2          44 IALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYA  123 (432)
T ss_dssp             EEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEE
T ss_pred             EEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEE
Confidence            5799999999999995556799999999999999999999999999987653   222   2344555666778899986


Q ss_pred             -EEeCCCCeEEEeeCCCCceE-Eec-----------CCCCCeEEEEECCCCCEE-EEecCCCcEEEEEe
Q psy15612         75 -VSTGKDNLLNAWRTPYGASI-FQS-----------KESSSVLSCDISADDKYI-VTGSGDKKATVYEV  129 (131)
Q Consensus        75 -~~~~~~~~i~~w~~~~~~~~-~~~-----------~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~  129 (131)
                       +++..++.+.+||..+++.+ ...           .+......+.++|++..+ ++...++.+.+||.
T Consensus       124 ~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~  192 (432)
T d1qksa2         124 IAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY  192 (432)
T ss_dssp             EEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEET
T ss_pred             EEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEc
Confidence             56777999999999998876 221           234566788999999876 45666788888874

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.6e-17  Score=97.45  Aligned_cols=124  Identities=17%  Similarity=0.278  Sum_probs=86.2

Q ss_pred             CEEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-------------------------
Q psy15612          1 MYLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-------------------------   54 (131)
Q Consensus         1 i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-------------------------   54 (131)
                      |++||+++++++..+ +|.+.|.+++|  ++++|++++.|+.+++|++..+....                         
T Consensus        37 i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (293)
T d1p22a2          37 IKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKD  114 (293)
T ss_dssp             EEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETT
T ss_pred             EEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccccccccccccccccccccccccccccceeecccc
Confidence            689999999999988 79999999887  67899999999999999987654210                         


Q ss_pred             -------------------eeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCE
Q psy15612         55 -------------------LHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKY  114 (131)
Q Consensus        55 -------------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~  114 (131)
                                         ...|...+....+  ....+++++.|+.+++||..+++.. ....+...+..+.++  +.+
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~  190 (293)
T d1p22a2         115 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRL  190 (293)
T ss_dssp             SCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTE
T ss_pred             cceeEeecccccccccccccccccccccccee--cccccccccCCCceeeecCCCCcEEEEEcccccccccccCC--CCe
Confidence                               0122233333333  2445566677777888887777766 445556666655553  456


Q ss_pred             EEEecCCCcEEEEEee
Q psy15612        115 IVTGSGDKKATVYEVI  130 (131)
Q Consensus       115 l~~~~~d~~i~vw~~~  130 (131)
                      +++++.|+.+++||++
T Consensus       191 l~~~~~dg~i~i~d~~  206 (293)
T d1p22a2         191 VVSGSSDNTIRLWDIE  206 (293)
T ss_dssp             EEEEETTSCEEEEETT
T ss_pred             EEEecCCCEEEEEecc
Confidence            6777777777777753

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=5.5e-19  Score=109.95  Aligned_cols=127  Identities=9%  Similarity=0.004  Sum_probs=95.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE---Ee---eccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY---QL---HLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~---~~---~~~~~~v~~~~~~~~~~~~   74 (131)
                      |++||+.+++.+..+.....+..++|+|||+++++++.|+.+++||+.+++..   .+   ..|...+.+++|+|||+++
T Consensus        44 v~vwD~~t~~~~~~l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l  123 (426)
T d1hzua2          44 IALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYT  123 (426)
T ss_dssp             EEEEETTTCSEEEEEECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEE
T ss_pred             EEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEE
Confidence            68999999999999966667999999999999999999999999999887632   22   2455566677888999987


Q ss_pred             EEe-CCCCeEEEeeCCCCceE-EecC-----------CCCCeEEEEECCCCCEEEEecC-CCcEEEE
Q psy15612         75 VST-GKDNLLNAWRTPYGASI-FQSK-----------ESSSVLSCDISADDKYIVTGSG-DKKATVY  127 (131)
Q Consensus        75 ~~~-~~~~~i~~w~~~~~~~~-~~~~-----------~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw  127 (131)
                      +++ ..++.+.+||..+++.. ....           +......+..+++++.++.... .+.+.++
T Consensus       124 ~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~  190 (426)
T d1hzua2         124 IAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV  190 (426)
T ss_dssp             EEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred             EEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEE
Confidence            554 57899999999988776 2222           2344566777777776655443 3444443

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.79  E-value=5e-17  Score=96.09  Aligned_cols=128  Identities=16%  Similarity=0.172  Sum_probs=103.9

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCeE-EeeccccceEEEEEccCCCEEE-Ee
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDKY-QLHLHESCVLSLRFAACGKWFV-ST   77 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~-~~   77 (131)
                      |.+||+++++.+..+.....+..++|+|+|++++ ++..++.|.+||+.+++.. .+..+ ..+..+.|++++..++ ++
T Consensus        14 v~v~D~~t~~~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   92 (301)
T d1l0qa2          14 ISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-SSPQGVAVSPDGKQVYVTN   92 (301)
T ss_dssp             EEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEE
T ss_pred             EEEEECCCCeEEEEEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecc-ccccccccccccccccccc
Confidence            5799999999998887777889999999999875 5667889999999988864 34443 4578999999998655 55


Q ss_pred             CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      ..+..+.+|+..+++..........+.+++++|+++.++ ++..++.+.+|+.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~  145 (301)
T d1l0qa2          93 MASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINT  145 (301)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             cccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeec
Confidence            667889999999988886666677888999999999875 4555778888875

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=7.1e-18  Score=100.65  Aligned_cols=127  Identities=14%  Similarity=0.136  Sum_probs=94.1

Q ss_pred             CEEEeCCCCceeeee----cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCe-------EE---------eeccc
Q psy15612          1 MYLQSVSPGRQLQQH----DFSSQIFSLGYCP-SGEWLAVGMENSNVEVLHALKPDK-------YQ---------LHLHE   59 (131)
Q Consensus         1 i~iwd~~~~~~~~~~----~~~~~v~~~~~~~-~~~~l~~~~~~~~v~~~~~~~~~~-------~~---------~~~~~   59 (131)
                      |++||+.+.+.....    .......+..+.+ ++..+++++.++.+.+|+......       ..         ...|.
T Consensus       172 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (342)
T d1yfqa_         172 VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA  251 (342)
T ss_dssp             EEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSC
T ss_pred             EEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCccc
Confidence            478998766544322    3445566656554 677889999999999998764321       11         12455


Q ss_pred             cceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         60 SCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      ..+.+++|+|++++|++++.|+.|++||+.+++.+....+......++|+|+++++++++.|+.+++|
T Consensus       252 ~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a~sdd~~~~~  319 (342)
T d1yfqa_         252 YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTN  319 (342)
T ss_dssp             CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTHHHHC
T ss_pred             ccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEEEcCCcEEEe
Confidence            67889999999999999999999999999999888555444556678888999999988877765554

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.75  E-value=7.7e-16  Score=90.91  Aligned_cols=128  Identities=11%  Similarity=0.023  Sum_probs=102.0

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC-CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe---
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN-SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST---   77 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---   77 (131)
                      .+|+..+++.+..+.....+..+.++|++..++++..+ +.+.+++...............+..+.++++++.++.+   
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~  220 (301)
T d1l0qa2         141 SVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVD  220 (301)
T ss_dssp             EEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEEC
T ss_pred             eeeeccccceeeecccCCCceEEEeeccccceeeecccccccccccccceeeeecccccCCcceeecccccccccccccc
Confidence            57888888888888777788999999999988877665 45667777766665555556678899999999987654   


Q ss_pred             CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEE-EEecCCCcEEEEEe
Q psy15612         78 GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYI-VTGSGDKKATVYEV  129 (131)
Q Consensus        78 ~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~  129 (131)
                      ..++.+.+||..+++..........+..++|+|+|+++ ++++.+++|.+||+
T Consensus       221 ~~~~~v~v~D~~t~~~~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~  273 (301)
T d1l0qa2         221 KYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDT  273 (301)
T ss_dssp             SSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             ceeeeeeeeecCCCeEEEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEEC
Confidence            34568999999999887555556778999999999987 56777899999996

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.75  E-value=5.6e-17  Score=97.08  Aligned_cols=127  Identities=7%  Similarity=-0.005  Sum_probs=99.0

Q ss_pred             CEEEeCCCCceeeee---cCCCCeEEEEECCCCCEEE-EEeCCCcEEEEeCCCCCe-EEeecc-----ccceEEEEEccC
Q psy15612          1 MYLQSVSPGRQLQQH---DFSSQIFSLGYCPSGEWLA-VGMENSNVEVLHALKPDK-YQLHLH-----ESCVLSLRFAAC   70 (131)
Q Consensus         1 i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~-~~~~~~~v~~~~~~~~~~-~~~~~~-----~~~v~~~~~~~~   70 (131)
                      |++||+++++.+..+   .+...+..++|+|||++++ +++.++.|.+||+.+++. ..+..+     ...+..++|+|+
T Consensus        13 v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~d   92 (337)
T d1pbyb_          13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPD   92 (337)
T ss_dssp             EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTT
T ss_pred             EEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCC
Confidence            589999999998877   2345688999999999874 566789999999999886 333332     233557999999


Q ss_pred             CCEEEEeCC------------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         71 GKWFVSTGK------------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        71 ~~~~~~~~~------------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ++.++.+..            +..+.+||..+++..........+..++|+|+|+++++++.+  +.+||.
T Consensus        93 g~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~d~  161 (337)
T d1pbyb_          93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD--LHVMDP  161 (337)
T ss_dssp             SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSS--EEEEET
T ss_pred             CcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCC--cceeee
Confidence            999887653            567889999988887555566778899999999999888654  667775

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=2.2e-16  Score=94.54  Aligned_cols=130  Identities=13%  Similarity=0.128  Sum_probs=96.7

Q ss_pred             CEEEeCCCCc---eeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCCe-EE---eeccccceEEEEEccCCC
Q psy15612          1 MYLQSVSPGR---QLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALKPDK-YQ---LHLHESCVLSLRFAACGK   72 (131)
Q Consensus         1 i~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~~-~~---~~~~~~~v~~~~~~~~~~   72 (131)
                      |++||+.+..   .+..+++.+.+..++|+|||++|++++ .++.|.+|++..... ..   .......+..++|+|||+
T Consensus        16 I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~   95 (333)
T d1ri6a_          16 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQ   95 (333)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSS
T ss_pred             EEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCC
Confidence            6899987543   334558889999999999999986555 478999999875542 22   223445677899999999


Q ss_pred             EEEEeCC-CCeEEEeeCCCCceE---EecCCCCCeEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612         73 WFVSTGK-DNLLNAWRTPYGASI---FQSKESSSVLSCDISADDKYIVTGSG-DKKATVYEVI  130 (131)
Q Consensus        73 ~~~~~~~-~~~i~~w~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~  130 (131)
                      ++++++. ++.+.+|+.......   ....+...+.++.++|++++++.++. +..+.+|+..
T Consensus        96 ~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~  158 (333)
T d1ri6a_          96 FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS  158 (333)
T ss_dssp             EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             EEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEec
Confidence            9888765 667888887766544   33456677889999999998877664 5568888763

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.70  E-value=4e-17  Score=101.51  Aligned_cols=104  Identities=11%  Similarity=0.056  Sum_probs=80.6

Q ss_pred             EECCCCC--EEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--Ee---
Q psy15612         25 GYCPSGE--WLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQ---   96 (131)
Q Consensus        25 ~~~~~~~--~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~---   96 (131)
                      .++++.+  ++++...+++|.+||+.++++ ..+..+ ..+..++|||||+++++++.|+.+++||+.+++..  ..   
T Consensus        25 ~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~  103 (426)
T d1hzua2          25 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI  103 (426)
T ss_dssp             CSCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC
T ss_pred             cccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeC
Confidence            3444433  557788899999999999986 455554 46899999999999999999999999999988754  11   


Q ss_pred             -cCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612         97 -SKESSSVLSCDISADDKYIVTG-SGDKKATVYEV  129 (131)
Q Consensus        97 -~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~  129 (131)
                       ..+.+.+.+++|+|+|++++++ ..++.+.+||.
T Consensus       104 ~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~  138 (426)
T d1hzua2         104 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG  138 (426)
T ss_dssp             CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred             CCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcC
Confidence             1344556677788999987554 46889999985

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.69  E-value=2.7e-15  Score=89.68  Aligned_cols=125  Identities=15%  Similarity=0.126  Sum_probs=95.1

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE----------------------------
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY----------------------------   53 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~----------------------------   53 (131)
                      .+||..+++....+.....+..++|+|+|+++++++.+  ..+||..+.+..                            
T Consensus       118 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (337)
T d1pbyb_         118 ALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS  195 (337)
T ss_dssp             EEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSS--EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTT
T ss_pred             eeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCC--cceeeeecCcEEEEeecCCccccceecCCcceeecccccc
Confidence            57888988888888777778899999999999887643  555665433210                            


Q ss_pred             ---------------------------------------EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         54 ---------------------------------------QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        54 ---------------------------------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                                                             ....+...+..+.++|++..++..  ++.+.+||+.+++.+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~  273 (337)
T d1pbyb_         196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI  273 (337)
T ss_dssp             TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE
T ss_pred             ceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEE
Confidence                                                   011233344556677777776655  578999999999988


Q ss_pred             EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         95 FQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ....+...+.+++|+|+|+++++++.+++|.+||+.
T Consensus       274 ~~~~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~  309 (337)
T d1pbyb_         274 KRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE  309 (337)
T ss_dssp             EEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred             EEEcCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence            666677888999999999999999999999999963

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.69  E-value=6.2e-17  Score=101.01  Aligned_cols=103  Identities=14%  Similarity=0.069  Sum_probs=80.0

Q ss_pred             CCCCCEEEEEeCCCcEEEEeCCCCCe-EEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--Ee----cCC
Q psy15612         27 CPSGEWLAVGMENSNVEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQ----SKE   99 (131)
Q Consensus        27 ~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~----~~~   99 (131)
                      +++.-++++.+.+++|.+||..++++ ..+..+ ..+..++|||||++++++++|+.+.+||+.+++..  ..    ..+
T Consensus        29 ~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~  107 (432)
T d1qksa2          29 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA  107 (432)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE
T ss_pred             CCCcEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCC
Confidence            33334457888999999999999987 445544 46899999999999999999999999999887643  22    124


Q ss_pred             CCCeEEEEECCCCCEE-EEecCCCcEEEEEee
Q psy15612        100 SSSVLSCDISADDKYI-VTGSGDKKATVYEVI  130 (131)
Q Consensus       100 ~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~  130 (131)
                      .+.+.+..|+|||+++ ++++.++.+++||..
T Consensus       108 ~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~  139 (432)
T d1qksa2         108 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE  139 (432)
T ss_dssp             EEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred             CCeEEecccCCCCCEEEEEcCCCCeEEEEeCc
Confidence            4555666778899986 667779999999963

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.67  E-value=6.3e-16  Score=97.01  Aligned_cols=128  Identities=10%  Similarity=0.073  Sum_probs=98.4

Q ss_pred             CEEEeCCCCceeeee------cCCCCeEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCCeEEeeccccceEEE
Q psy15612          1 MYLQSVSPGRQLQQH------DFSSQIFSLGYCPSGEWLAVGME---------NSNVEVLHALKPDKYQLHLHESCVLSL   65 (131)
Q Consensus         1 i~iwd~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~v~~~   65 (131)
                      |.+||+++++....+      .+...+.+..|||||+.|+.++.         ++.+.+||+.+++...+..+...+..+
T Consensus        38 ~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~  117 (470)
T d2bgra1          38 ILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWV  117 (470)
T ss_dssp             EEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEE
T ss_pred             EEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccccccCCcccccc
Confidence            478999999876554      34567999999999999988743         457889999999887788888899999


Q ss_pred             EEccCCCEEEEeCCCCeEEEeeCCCCceEEecC-------------------CCCCeEEEEECCCCCEEEEecCCC-cEE
Q psy15612         66 RFAACGKWFVSTGKDNLLNAWRTPYGASIFQSK-------------------ESSSVLSCDISADDKYIVTGSGDK-KAT  125 (131)
Q Consensus        66 ~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~-------------------~~~~v~~~~~~~~~~~l~~~~~d~-~i~  125 (131)
                      .|||||+.++.. .++.+.+|+..+++......                   ..+....+.|||+|++++....|. .+.
T Consensus       118 ~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~  196 (470)
T d2bgra1         118 TWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVP  196 (470)
T ss_dssp             EECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCC
T ss_pred             ccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCc
Confidence            999999999886 47789999998887652211                   123345678999999998876543 355


Q ss_pred             EEEe
Q psy15612        126 VYEV  129 (131)
Q Consensus       126 vw~~  129 (131)
                      .|.+
T Consensus       197 ~~~~  200 (470)
T d2bgra1         197 LIEY  200 (470)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            5543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.61  E-value=1.7e-14  Score=86.44  Aligned_cols=106  Identities=12%  Similarity=0.030  Sum_probs=81.8

Q ss_pred             EEECCCCCEEEEEeCCCcEEEEeCCCCCe-EEee-ccccceEEEEEccCCCEEE-EeCCCCeEEEeeCCCCceEEecC--
Q psy15612         24 LGYCPSGEWLAVGMENSNVEVLHALKPDK-YQLH-LHESCVLSLRFAACGKWFV-STGKDNLLNAWRTPYGASIFQSK--   98 (131)
Q Consensus        24 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~~~~~~~~~~~~--   98 (131)
                      ++++++++++++++.+++|.+||+.+.++ ..+. .+...+..++|+|||++++ ++..++.+.+||+.+++......  
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            46899999999999999999999999886 3343 3455678999999999875 55678999999999998772211  


Q ss_pred             -----CCCCeEEEEECCCCCEEEEec------------CCCcEEEEEe
Q psy15612         99 -----ESSSVLSCDISADDKYIVTGS------------GDKKATVYEV  129 (131)
Q Consensus        99 -----~~~~v~~~~~~~~~~~l~~~~------------~d~~i~vw~~  129 (131)
                           ....+..++|+|+|+++++++            .+..+.+|+.
T Consensus        82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~  129 (346)
T d1jmxb_          82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST  129 (346)
T ss_dssp             CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred             ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEec
Confidence                 112456789999999887664            3556777764

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.58  E-value=4e-15  Score=89.18  Aligned_cols=128  Identities=7%  Similarity=-0.096  Sum_probs=93.6

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEE--------------------------EEeCCCcEEEEeCCCCCe--E
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLA--------------------------VGMENSNVEVLHALKPDK--Y   53 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--------------------------~~~~~~~v~~~~~~~~~~--~   53 (131)
                      .+||+.+++.+..+........+.++|++..+.                          ++..+..+.+|+..++..  .
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (346)
T d1jmxb_         166 YKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ  245 (346)
T ss_dssp             EEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEE
T ss_pred             eEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEE
Confidence            568888888777664444444455555544322                          222334577788877764  3


Q ss_pred             EeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         54 QLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        54 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      ....+...+..+.+++++..++... ++.+.+||..+++.+........+.+++|+|||+++++++.|+.|++||+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~  321 (346)
T d1jmxb_         246 EFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD  321 (346)
T ss_dssp             EEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred             EeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECc
Confidence            3456777888899999888777665 457999999999888555566789999999999999999999999999974

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=3.4e-13  Score=80.51  Aligned_cols=97  Identities=11%  Similarity=0.085  Sum_probs=73.5

Q ss_pred             EEEEeCCCcEEEEeCCCCC-e--EEeeccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCCceE----EecCCCCCeE
Q psy15612         33 LAVGMENSNVEVLHALKPD-K--YQLHLHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYGASI----FQSKESSSVL  104 (131)
Q Consensus        33 l~~~~~~~~v~~~~~~~~~-~--~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~~~----~~~~~~~~v~  104 (131)
                      ++++..+++|++|++.... .  .+...+...+..++|+|||++|+++ ..++.|++|++......    ........+.
T Consensus         7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~   86 (333)
T d1ri6a_           7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT   86 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred             EEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCce
Confidence            4666789999999986543 2  3345677889999999999998655 55899999998755432    2334566678


Q ss_pred             EEEECCCCCEEEEecC-CCcEEEEEe
Q psy15612        105 SCDISADDKYIVTGSG-DKKATVYEV  129 (131)
Q Consensus       105 ~~~~~~~~~~l~~~~~-d~~i~vw~~  129 (131)
                      .++|+|+|+++++++. ++.+.+|+.
T Consensus        87 ~l~~spDg~~l~v~~~~~~~v~~~~~  112 (333)
T d1ri6a_          87 HISTDHQGQFVFVGSYNAGNVSVTRL  112 (333)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             EEEEcCCCCEEeecccCCCceeeecc
Confidence            8999999999988775 667888875

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.39  E-value=3.6e-12  Score=79.80  Aligned_cols=106  Identities=10%  Similarity=0.078  Sum_probs=84.2

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe------eccccceEEEEEccCCCEEEEeCC---------CCeEEE
Q psy15612         21 IFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL------HLHESCVLSLRFAACGKWFVSTGK---------DNLLNA   85 (131)
Q Consensus        21 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~---------~~~i~~   85 (131)
                      -..+.|.+++.++..  .++.+.+||+.+++...+      ..+...+.++.|||||++|+.++.         ++.+.+
T Consensus        19 ~~~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l   96 (470)
T d2bgra1          19 LYSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI   96 (470)
T ss_dssp             CCCCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred             ccCCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEE
Confidence            346889999887653  567899999999886432      234567899999999999987743         456889


Q ss_pred             eeCCCCceEEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy15612         86 WRTPYGASIFQSKESSSVLSCDISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus        86 w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      ||+.+++...+..+...+..+.|||+|+.++... ++.+.+|++
T Consensus        97 ~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~  139 (470)
T d2bgra1          97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIE  139 (470)
T ss_dssp             EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESS
T ss_pred             EECCCCcccccccCCccccccccccCcceeeEee-cccceEEEC
Confidence            9999988777777889999999999999998865 567777764

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.34  E-value=5.5e-11  Score=71.42  Aligned_cols=93  Identities=13%  Similarity=0.053  Sum_probs=67.3

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCeE-Eeecc-------ccce
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDKY-QLHLH-------ESCV   62 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~~-~~~~~-------~~~v   62 (131)
                      |.+||..+++.+..+.. +....++|+|||+.|++.+          .++.|.+||+.+++.. .+..+       ....
T Consensus        30 v~v~D~~tg~~~~~~~~-g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~  108 (355)
T d2bbkh_          30 QFVIDGEAGRVIGMIDG-GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYP  108 (355)
T ss_dssp             EEEEETTTTEEEEEEEE-CSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred             EEEEECCCCcEEEEEEC-CCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCC
Confidence            46899999998887732 2233699999999887643          4678999999988853 22221       1234


Q ss_pred             EEEEEccCCCEEEEe--CCCCeEEEeeCCCCceE
Q psy15612         63 LSLRFAACGKWFVST--GKDNLLNAWRTPYGASI   94 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~--~~~~~i~~w~~~~~~~~   94 (131)
                      ..+.|+|+++.++..  +.+..+.+|+..+++..
T Consensus       109 ~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~  142 (355)
T d2bbkh_         109 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK  142 (355)
T ss_dssp             GGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred             ceEEEecCCCeeEEecCCCCceeeeeecCCCcEe
Confidence            568999999987765  45667889998887665

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.30  E-value=2.4e-10  Score=69.12  Aligned_cols=126  Identities=10%  Similarity=-0.057  Sum_probs=89.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCCeE-Eeecccc-------ce
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME----------NSNVEVLHALKPDKY-QLHLHES-------CV   62 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------~~~v~~~~~~~~~~~-~~~~~~~-------~v   62 (131)
                      |.+||.++++.+..+... ....++|+|||+.++++..          ++.|.+||..+++.. .+..+..       ..
T Consensus        49 v~v~D~~tg~~~~~~~~~-~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~  127 (373)
T d2madh_          49 QWVLDAGSGSILGHVNGG-FLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS  127 (373)
T ss_pred             EEEEECCCCCEEEEEeCC-CCccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCC
Confidence            468899999998877322 2337999999999988643          567999999988853 3333322       23


Q ss_pred             EEEEEccCCCEEEEe--CCCCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEE-EEecCCCcEEEEEee
Q psy15612         63 LSLRFAACGKWFVST--GKDNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYI-VTGSGDKKATVYEVI  130 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~--~~~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~~  130 (131)
                      ..+.|+++++.++..  ..++.+.+|+....+....   ...+.++.++|+++.+ ++.+.|+++.+|+..
T Consensus       128 ~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~  195 (373)
T d2madh_         128 WMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQL---LSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHA  195 (373)
T ss_pred             CcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEE---eccceeEEEecCCCcEEEEEcCCCeEEEEEcC
Confidence            457889998876554  4456788888877665422   2345678899998765 577889999999863

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.27  E-value=5.1e-11  Score=72.38  Aligned_cols=49  Identities=8%  Similarity=0.053  Sum_probs=37.4

Q ss_pred             eEEEeeCCCCceEEecCCCCCeEEEEECCCCC-E-EEEecCCCcEEEEEee
Q psy15612         82 LLNAWRTPYGASIFQSKESSSVLSCDISADDK-Y-IVTGSGDKKATVYEVI  130 (131)
Q Consensus        82 ~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~-~-l~~~~~d~~i~vw~~~  130 (131)
                      .+.+||..+++.+........+..++|+|+|+ + ++++..++.|.+||..
T Consensus       295 ~v~v~D~~t~~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~  345 (368)
T d1mdah_         295 NTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA  345 (368)
T ss_dssp             EEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred             eEEEEECCCCcEeEEecCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECC
Confidence            47778888887775445556788999999997 3 4566778999999963

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.25  E-value=3.3e-11  Score=72.40  Aligned_cols=110  Identities=12%  Similarity=0.082  Sum_probs=79.2

Q ss_pred             eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee---cc----------ccceEEEEEccCCCEEEEeCCC-------
Q psy15612         21 IFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH---LH----------ESCVLSLRFAACGKWFVSTGKD-------   80 (131)
Q Consensus        21 v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~---~~----------~~~v~~~~~~~~~~~~~~~~~~-------   80 (131)
                      +....+.+++..++.++.++.+.+|++..+....+.   .+          ......+++++++..++....+       
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~  276 (355)
T d2bbkh_         197 INHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHK  276 (355)
T ss_dssp             CSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTT
T ss_pred             eeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeec
Confidence            334556667777888888999999999877643211   11          1223458899999987765332       


Q ss_pred             ---CeEEEeeCCCCceEEecCCCCCeEEEEECCCCC--EEEEecCCCcEEEEEee
Q psy15612         81 ---NLLNAWRTPYGASIFQSKESSSVLSCDISADDK--YIVTGSGDKKATVYEVI  130 (131)
Q Consensus        81 ---~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~vw~~~  130 (131)
                         +.+.+||..+++.+........+.+++|+|+|+  ++++++.|++|.+||++
T Consensus       277 ~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~  331 (355)
T d2bbkh_         277 TASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE  331 (355)
T ss_dssp             SCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred             CCCCeEEEEeCCCCcEEEEecCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECC
Confidence               368999999998874444566788999999998  34567779999999963

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.23  E-value=8e-10  Score=68.64  Aligned_cols=130  Identities=12%  Similarity=-0.045  Sum_probs=85.9

Q ss_pred             CEEEeCCCCceeeee--cCCCCeEEEEECCCCCEE--EEEeCCC-----------------cEEEEeCCCCCeEEeeccc
Q psy15612          1 MYLQSVSPGRQLQQH--DFSSQIFSLGYCPSGEWL--AVGMENS-----------------NVEVLHALKPDKYQLHLHE   59 (131)
Q Consensus         1 i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l--~~~~~~~-----------------~v~~~~~~~~~~~~~~~~~   59 (131)
                      |.++|++++++...+  .....+..++|+|+|+.+  +..+.+.                 .+..+|..+.+........
T Consensus        96 VavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~  175 (441)
T d1qnia2          96 VARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVD  175 (441)
T ss_dssp             EEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEES
T ss_pred             EEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEecC
Confidence            467899999887765  556789999999999953  3333322                 1244677766653222233


Q ss_pred             cceEEEEEccCCCEEEEeCCCC-----------------------------------------eEEEeeCCCCceEEecC
Q psy15612         60 SCVLSLRFAACGKWFVSTGKDN-----------------------------------------LLNAWRTPYGASIFQSK   98 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~-----------------------------------------~i~~w~~~~~~~~~~~~   98 (131)
                      ..+..+.++|+|+++++++.+.                                         .+.+++....+......
T Consensus       176 ~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IP  255 (441)
T d1qnia2         176 GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIP  255 (441)
T ss_dssp             SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEEC
T ss_pred             CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEe
Confidence            4578899999999988765432                                         22333333333333334


Q ss_pred             CCCCeEEEEECCCCCEEE-EecCCCcEEEEEee
Q psy15612         99 ESSSVLSCDISADDKYIV-TGSGDKKATVYEVI  130 (131)
Q Consensus        99 ~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~~  130 (131)
                      .+..+..+.++|+|++++ ++..++++.|||+.
T Consensus       256 vgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~  288 (441)
T d1qnia2         256 VPKNPHGLNTSPDGKYFIANGKLSPTVSVIAID  288 (441)
T ss_dssp             CBSSCCCEEECTTSCEEEEECTTSSBEEEEEGG
T ss_pred             CCCCccCceECCCCCEEEEeCCcCCcEEEEEee
Confidence            455578899999999875 45668999999963

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.20  E-value=1.7e-09  Score=65.34  Aligned_cols=91  Identities=11%  Similarity=0.046  Sum_probs=67.4

Q ss_pred             eEEEEECCCCCEEE----------EEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCE--EEEeCCCCeEEEeeC
Q psy15612         21 IFSLGYCPSGEWLA----------VGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKW--FVSTGKDNLLNAWRT   88 (131)
Q Consensus        21 v~~~~~~~~~~~l~----------~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~i~~w~~   88 (131)
                      ...+.++|++..++          ....++.+.+||..+++......+...+..++|+|||+.  +++++.++.+++||+
T Consensus       269 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~  348 (373)
T d2madh_         269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDA  348 (373)
T ss_pred             ceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEEC
Confidence            34456666666544          344566789999998886555556677899999999985  457888999999999


Q ss_pred             CCCceE-EecCCCCCeEEEEECCC
Q psy15612         89 PYGASI-FQSKESSSVLSCDISAD  111 (131)
Q Consensus        89 ~~~~~~-~~~~~~~~v~~~~~~~~  111 (131)
                      .+++.+ ....++.....+++.++
T Consensus       349 ~tg~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         349 GAGDQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             CCCCEEEEECCCCCCCcEEEEecC
Confidence            999998 45557777777776543

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.19  E-value=1.5e-10  Score=70.25  Aligned_cols=91  Identities=13%  Similarity=0.022  Sum_probs=67.6

Q ss_pred             EEEeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCe-EEeecc-------ccce
Q psy15612          2 YLQSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGM----------ENSNVEVLHALKPDK-YQLHLH-------ESCV   62 (131)
Q Consensus         2 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~----------~~~~v~~~~~~~~~~-~~~~~~-------~~~v   62 (131)
                      .++|..+++.+..+ .+...  .++|+|||+.++..+          .++.|.+||..+.+. ..+..+       ....
T Consensus        49 ~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p  126 (368)
T d1mdah_          49 WVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRV  126 (368)
T ss_dssp             EEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCT
T ss_pred             EEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCc
Confidence            46798999888776 33322  588999999988754          356799999998875 333222       1224


Q ss_pred             EEEEEccCCCEEEEeC-CCCeEEEeeCCCCceE
Q psy15612         63 LSLRFAACGKWFVSTG-KDNLLNAWRTPYGASI   94 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~~~~   94 (131)
                      ..++|+|||++++++. .++.+.+||+.+++..
T Consensus       127 ~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~  159 (368)
T d1mdah_         127 HIIGNCASSACLLFFLFGSSAAAGLSVPGASDD  159 (368)
T ss_dssp             TSEEECTTSSCEEEEECSSSCEEEEEETTTEEE
T ss_pred             cceEECCCCCEEEEEeCCCCeEEEEECCCCcEe
Confidence            4689999999988775 5689999999998877

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.18  E-value=3.5e-09  Score=62.83  Aligned_cols=121  Identities=12%  Similarity=0.124  Sum_probs=88.9

Q ss_pred             CCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612          7 SPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAW   86 (131)
Q Consensus         7 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w   86 (131)
                      ...+.+..+.....+..++++|||+++++...+++|..++... ....+......+.+++|+++|+.+++...++.+..+
T Consensus        16 ~~~~v~~~~p~~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~   94 (302)
T d2p4oa1          16 APAKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVV   94 (302)
T ss_dssp             CCEEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CcccEEEECCCCCCcCCEEECCCCCEEEEeCCCCEEEEEeCCC-CEEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEE
Confidence            3345555555455688999999999999988899898888654 444555566789999999999988887777777777


Q ss_pred             eCCC--CceE--EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         87 RTPY--GASI--FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        87 ~~~~--~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +...  +...  ...........+.+.++++++++.+.++.+..+|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~  140 (302)
T d2p4oa1          95 SLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLID  140 (302)
T ss_dssp             EEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred             EecccccceeeccccCCccccceeEEccCCCEEeeccccccceeee
Confidence            6543  2222  3334556788999999999888877777666554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.99  E-value=3.8e-08  Score=61.14  Aligned_cols=126  Identities=10%  Similarity=-0.026  Sum_probs=86.0

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC-----------------------------------------c
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS-----------------------------------------N   41 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----------------------------------------~   41 (131)
                      .+|.++.+....+...+.+..+.++|+|+++++++.+.                                         .
T Consensus       160 ~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v  239 (441)
T d1qnia2         160 AIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKV  239 (441)
T ss_dssp             EEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCC
T ss_pred             eecCccceeeEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCc
Confidence            46777777776665556788899999999988776542                                         2


Q ss_pred             EEEEeCCCCCe-EEeeccccceEEEEEccCCCEEE-EeCCCCeEEEeeCCCCce-----------E-EecCCCCCeEEEE
Q psy15612         42 VEVLHALKPDK-YQLHLHESCVLSLRFAACGKWFV-STGKDNLLNAWRTPYGAS-----------I-FQSKESSSVLSCD  107 (131)
Q Consensus        42 v~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~~~~~~~-----------~-~~~~~~~~v~~~~  107 (131)
                      +.+++...... ..+... ..+..+.++|||++++ ++..++++.+||+.+...           + ......-.....+
T Consensus       240 ~vvd~~~~~~v~~~IPvg-ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~  318 (441)
T d1qnia2         240 PVVDGRGESEFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTT  318 (441)
T ss_dssp             CEEECSSSCSSEEEECCB-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEE
T ss_pred             EEEEcccCCceEEEEeCC-CCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccce
Confidence            23333333332 333333 3467899999999875 567789999999764221           1 1112233456778


Q ss_pred             ECCCCCEEEEecCCCcEEEEEe
Q psy15612        108 ISADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       108 ~~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      |+++|+.+.+...|.+|..|++
T Consensus       319 fd~~g~~yts~~~ds~v~kw~~  340 (441)
T d1qnia2         319 FDGRGNAYTTLFIDSQVCKWNI  340 (441)
T ss_dssp             ECSSSEEEEEETTTTEEEEEEH
T ss_pred             ecCCceEEEcccccceEEEecc
Confidence            9999998888899999999986

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.98  E-value=2.4e-07  Score=54.20  Aligned_cols=120  Identities=12%  Similarity=0.136  Sum_probs=85.6

Q ss_pred             Cceeeee---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee--ccccceEEEEEccCCCEEEEeCC-CCe
Q psy15612          9 GRQLQQH---DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH--LHESCVLSLRFAACGKWFVSTGK-DNL   82 (131)
Q Consensus         9 ~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~-~~~   82 (131)
                      ++.+..+   .+......+++.+++..+++....+.|.+|+........+.  +....+..+++.++|+.+++-.. +..
T Consensus       144 g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~  223 (279)
T d1q7fa_         144 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN  223 (279)
T ss_dssp             SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred             CceeecccccccccccceeeeccceeEEeeeccccceeeeecCCceeeeecccccccCCcccccccCCeEEEEECCCCcE
Confidence            4444443   34456788899999988888888889999998765555542  24456789999999997766543 456


Q ss_pred             EEEeeCCCCceE--Ee-cCCCCCeEEEEECCCCCEEEEecCCCcEEEEEee
Q psy15612         83 LNAWRTPYGASI--FQ-SKESSSVLSCDISADDKYIVTGSGDKKATVYEVI  130 (131)
Q Consensus        83 i~~w~~~~~~~~--~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~~~  130 (131)
                      |.+|+. +|+.+  .. .........+++.|+|+++++ +.++.|++|..+
T Consensus       224 v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~-~~n~~v~~fr~~  272 (279)
T d1q7fa_         224 LTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV  272 (279)
T ss_dssp             EEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred             EEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCCcEEEE-eCCCeEEEEEee
Confidence            899985 47765  22 233456889999999986554 568899999865

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.93  E-value=1e-07  Score=55.06  Aligned_cols=106  Identities=12%  Similarity=-0.002  Sum_probs=70.6

Q ss_pred             eCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC-c--EEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC--
Q psy15612          5 SVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS-N--VEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK--   79 (131)
Q Consensus         5 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~--v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--   79 (131)
                      +...+................|+|+++.++..+.++ .  +.+.+...... .............|+|||+.|+..+.  
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~  235 (269)
T d2hqsa1         157 NINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTFLDETPSLAPNGTMVIYSSSQG  235 (269)
T ss_dssp             ETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSSSCEEEEECTTSSEEEEEEEET
T ss_pred             ecccccceeeecccccccccccccccceeEEEeecCCceeeeEeecccccc-eEeecCccccceEECCCCCEEEEEEcCC
Confidence            444443333334555677889999999887765443 3  44445555544 33344555678899999999875443  


Q ss_pred             -CCeEEEeeCCCCceEEecCCCCCeEEEEECCC
Q psy15612         80 -DNLLNAWRTPYGASIFQSKESSSVLSCDISAD  111 (131)
Q Consensus        80 -~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~  111 (131)
                       ...+.++++..+....+....+.+...+|+|-
T Consensus       236 ~~~~l~~~~~dg~~~~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         236 MGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             TEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred             CCcEEEEEECCCCCEEEEeCCCCcEEeEEeCCC
Confidence             34688899987766666666778888999983

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.1e-08  Score=64.12  Aligned_cols=127  Identities=11%  Similarity=0.041  Sum_probs=83.9

Q ss_pred             CEEEeCCCCceeeeec----CCCCeEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCCeEEeec---cccceEE
Q psy15612          1 MYLQSVSPGRQLQQHD----FSSQIFSLGYCPSGEWLAVGME---------NSNVEVLHALKPDKYQLHL---HESCVLS   64 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~---------~~~v~~~~~~~~~~~~~~~---~~~~v~~   64 (131)
                      |.+||+.+++....+.    ....+....+|||++.++....         .+...++|+.++....+..   ....+..
T Consensus        39 i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~  118 (465)
T d1xfda1          39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQY  118 (465)
T ss_dssp             EEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSB
T ss_pred             EEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccce
Confidence            3577887776544332    2235678889999999877643         4568899999888655532   2344556


Q ss_pred             EEEccCCCEEEEeCCCCeEEEeeCCCCceEEec--CCC-----------------CCeEEEEECCCCCEEEEecC-CCcE
Q psy15612         65 LRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS--KES-----------------SSVLSCDISADDKYIVTGSG-DKKA  124 (131)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~--~~~-----------------~~v~~~~~~~~~~~l~~~~~-d~~i  124 (131)
                      ..|||||+.++... ++.+.+.+..++....+.  +..                 +.-..+-|||||++|+.... +..+
T Consensus       119 ~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V  197 (465)
T d1xfda1         119 AGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRV  197 (465)
T ss_dssp             CCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTS
T ss_pred             eeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEeccccc
Confidence            88999999988765 667888887766554221  111                 12246779999999987653 3445


Q ss_pred             EEEE
Q psy15612        125 TVYE  128 (131)
Q Consensus       125 ~vw~  128 (131)
                      ..+.
T Consensus       198 ~~~~  201 (465)
T d1xfda1         198 PIME  201 (465)
T ss_dssp             CEEE
T ss_pred             ceee
Confidence            4443

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.90  E-value=4.6e-07  Score=52.22  Aligned_cols=126  Identities=13%  Similarity=0.047  Sum_probs=80.6

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC---cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeC
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS---NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTG   78 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   78 (131)
                      .+-|...+.....+.....+.+.+|||||+.|+......   .+.+.+..+.....+..+........|+|+|+.++...
T Consensus        22 ~i~d~dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~  101 (269)
T d2hqsa1          22 RVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFAL  101 (269)
T ss_dssp             EEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEcCCCCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeecccccceecCCCCeeeEee
Confidence            344655444454556778889999999999998764433   46677777777777777888888999999999887654


Q ss_pred             C-CCe--EEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEE-ecCCCcEEEE
Q psy15612         79 K-DNL--LNAWRTPYGASIFQSKESSSVLSCDISADDKYIVT-GSGDKKATVY  127 (131)
Q Consensus        79 ~-~~~--i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~vw  127 (131)
                      . .+.  +..+.....................+++++..+.. ...++...+|
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~  154 (269)
T d2hqsa1         102 SKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY  154 (269)
T ss_dssp             CTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred             ecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEe
Confidence            3 222  33333333333344444555556667777665443 3344544444

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.90  E-value=1.9e-07  Score=56.72  Aligned_cols=114  Identities=10%  Similarity=0.123  Sum_probs=75.7

Q ss_pred             CCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCe---EEee-----------------ccccceEEEEEccCCCEEE
Q psy15612         17 FSSQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDK---YQLH-----------------LHESCVLSLRFAACGKWFV   75 (131)
Q Consensus        17 ~~~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~---~~~~-----------------~~~~~v~~~~~~~~~~~~~   75 (131)
                      .......+.|+|+++++... ..+++|.+|+......   ....                 ........+.++|||++++
T Consensus       191 ~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ly  270 (365)
T d1jofa_         191 PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF  270 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred             CCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEE
Confidence            45678999999999988555 4578899999865542   1110                 1122356789999999988


Q ss_pred             EeCCC------CeEEEeeCCC-CceE---E---ecCCCCCeEEEEECC-CCCEEEEec-CCCcEEEEEee
Q psy15612         76 STGKD------NLLNAWRTPY-GASI---F---QSKESSSVLSCDISA-DDKYIVTGS-GDKKATVYEVI  130 (131)
Q Consensus        76 ~~~~~------~~i~~w~~~~-~~~~---~---~~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~vw~~~  130 (131)
                      ++.+.      ..+..|+... +...   .   ..........++++| +|++|+.+. .++.|.+|++.
T Consensus       271 vsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~  340 (365)
T d1jofa_         271 ASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK  340 (365)
T ss_dssp             EEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred             EEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEe
Confidence            77432      2366676653 2221   1   112345677899998 789887664 57899999864

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.87  E-value=4.9e-08  Score=56.60  Aligned_cols=94  Identities=10%  Similarity=0.000  Sum_probs=69.8

Q ss_pred             EECCC--CCEEEEEeCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC----C--CeEEEeeCCCCceEEe
Q psy15612         25 GYCPS--GEWLAVGMENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK----D--NLLNAWRTPYGASIFQ   96 (131)
Q Consensus        25 ~~~~~--~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~--~~i~~w~~~~~~~~~~   96 (131)
                      ..+|+  |+.++..+ ++.|.+.|+.+++...+..+.......+|||||+.|+....    +  ..+.+.+..+++...+
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            35788  99888765 45688899999998888888888899999999999885432    2  2377778877776533


Q ss_pred             cC-------CCCCeEEEEECCCCCEEEEec
Q psy15612         97 SK-------ESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        97 ~~-------~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      ..       ........+|+|+|+.++...
T Consensus        84 t~~~~~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          84 TYFSGKSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             CCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             eecCCCccCccccccccccCCCCCEEEEEE
Confidence            22       223456788999999887643

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.80  E-value=1.1e-06  Score=50.88  Aligned_cols=110  Identities=14%  Similarity=0.131  Sum_probs=81.0

Q ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe-
Q psy15612         19 SQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ-   96 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~-   96 (131)
                      .....++++|+++.+++...++.+..++.......... ..-..+..+++.++|+.+++....+.+..++......... 
T Consensus       140 ~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~  219 (260)
T d1rwia_         140 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP  219 (260)
T ss_dssp             CSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECC
T ss_pred             CCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEc
Confidence            44678899999998888777888999998776654432 3445678999999999888888788888888764443322 


Q ss_pred             cCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         97 SKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        97 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ...-..+..++++++|+++++-..+++|+..+
T Consensus       220 ~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~  251 (260)
T d1rwia_         220 FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT  251 (260)
T ss_dssp             CCSCCCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred             cCCCCCeEEEEEeCCCCEEEEECCCCEEEEEe
Confidence            22335678999999999877766667776554

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.76  E-value=1.1e-06  Score=50.72  Aligned_cols=111  Identities=11%  Similarity=0.035  Sum_probs=79.3

Q ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe-eccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE-E
Q psy15612         18 SSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL-HLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI-F   95 (131)
Q Consensus        18 ~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~-~   95 (131)
                      ...+..+++.++++.+++-..+..+..++......... ......+..+++.++++.+++...++.+..++....... .
T Consensus        97 ~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~  176 (260)
T d1rwia_          97 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL  176 (260)
T ss_dssp             CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC
T ss_pred             eeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceeeee
Confidence            35678999999998877766666677777665543322 122345678999999998888788888999998755444 3


Q ss_pred             ecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         96 QSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ....-..+..+++.++|+++++-...+.+..++
T Consensus       177 ~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~  209 (260)
T d1rwia_         177 PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL  209 (260)
T ss_dssp             CCSSCCSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred             eccccCCCccceeeeeeeeeeeecCCCEEEEEe
Confidence            334456678999999999888777777776554

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.58  E-value=9e-06  Score=48.27  Aligned_cols=110  Identities=10%  Similarity=0.017  Sum_probs=74.5

Q ss_pred             CeEEEEECCCCC-----EEEEEeCCCcEEEEeCCCCC-e--EE-e---ec-cccceEEEEEccCCCEEEEeCCCCeEEEe
Q psy15612         20 QIFSLGYCPSGE-----WLAVGMENSNVEVLHALKPD-K--YQ-L---HL-HESCVLSLRFAACGKWFVSTGKDNLLNAW   86 (131)
Q Consensus        20 ~v~~~~~~~~~~-----~l~~~~~~~~v~~~~~~~~~-~--~~-~---~~-~~~~v~~~~~~~~~~~~~~~~~~~~i~~w   86 (131)
                      ..+.++|+|++.     ++++-...+.|..|++.... .  .. +   .. .....-.+++.++|+..++....+.|.+|
T Consensus       173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~  252 (314)
T d1pjxa_         173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF  252 (314)
T ss_dssp             SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred             eeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEE
Confidence            346788888754     33444567788888875332 2  11 1   11 22345679999999988777778899999


Q ss_pred             eCCCCceE-EecCCCCCeEEEEECCCCCEE-EEecCCCcEEEEEe
Q psy15612         87 RTPYGASI-FQSKESSSVLSCDISADDKYI-VTGSGDKKATVYEV  129 (131)
Q Consensus        87 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~vw~~  129 (131)
                      |...++.. ........+.+++|.|+++.| ++.+.++.|...++
T Consensus       253 dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~  297 (314)
T d1pjxa_         253 GPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             CTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             eCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence            98877765 334455778999999998754 56666777766554

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.56  E-value=1e-05  Score=47.65  Aligned_cols=84  Identities=12%  Similarity=0.166  Sum_probs=58.3

Q ss_pred             CceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEee--ccccceEEEEEccCCCEEEEeCCCCeEE
Q psy15612          9 GRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLH--LHESCVLSLRFAACGKWFVSTGKDNLLN   84 (131)
Q Consensus         9 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~i~   84 (131)
                      ++..........+..++++|+|+++++...++.+..++.....  ...+.  ........+.+.++++.+++.+.++.+.
T Consensus        58 g~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~  137 (302)
T d2p4oa1          58 GNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIW  137 (302)
T ss_dssp             CCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEE
T ss_pred             CCEEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccce
Confidence            3333333666789999999999998888888888887765433  22222  2344577888999998888777777777


Q ss_pred             EeeCCCCc
Q psy15612         85 AWRTPYGA   92 (131)
Q Consensus        85 ~w~~~~~~   92 (131)
                      .++...+.
T Consensus       138 ~~~~~~~~  145 (302)
T d2p4oa1         138 LIDVVQPS  145 (302)
T ss_dssp             EEETTTTE
T ss_pred             eeeccCCc
Confidence            77665443

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.54  E-value=1.4e-05  Score=48.35  Aligned_cols=100  Identities=11%  Similarity=0.138  Sum_probs=67.6

Q ss_pred             CeEEEEECCCCCEEEEEeC-CCcEEEEeCCC-CCeE---Ee--eccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCC
Q psy15612         20 QIFSLGYCPSGEWLAVGME-NSNVEVLHALK-PDKY---QL--HLHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYG   91 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~-~~~v~~~~~~~-~~~~---~~--~~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~   91 (131)
                      .+.++.|+|+|+++++++. ...|.+|+... +...   ..  ......+..+.|+|++++++.. ..++.|.+|+...+
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~  225 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA  225 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCC
Confidence            4678999999998887754 44688887643 3321   11  2234578899999999987654 55788999998755


Q ss_pred             ceE--Ee------c------------CCCCCeEEEEECCCCCEEEEec
Q psy15612         92 ASI--FQ------S------------KESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        92 ~~~--~~------~------------~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                      +..  ..      .            ........+.++|+|++++++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsn  273 (365)
T d1jofa_         226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             CceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEc
Confidence            432  10      0            0112356788999999987764

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.47  E-value=1.9e-05  Score=46.88  Aligned_cols=126  Identities=7%  Similarity=0.046  Sum_probs=76.1

Q ss_pred             EeCCCCceeeee-cCCCCeEEEEECCCCCEEEEEeC----CCcEEEEeCCCCCeEEeec---cccceEEEEEccCCCEEE
Q psy15612          4 QSVSPGRQLQQH-DFSSQIFSLGYCPSGEWLAVGME----NSNVEVLHALKPDKYQLHL---HESCVLSLRFAACGKWFV   75 (131)
Q Consensus         4 wd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~----~~~v~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~   75 (131)
                      ||.++++..... ........++++++|+++++...    .+.+...+..+........   ....+..+++.++|+..+
T Consensus        66 i~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~v  145 (319)
T d2dg1a1          66 INPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYF  145 (319)
T ss_dssp             ECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEE
T ss_pred             EECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeeccCCCcccCCcceeEEeccceee
Confidence            344444333333 45566789999999988776533    2335555666555433322   233577899999999776


Q ss_pred             EeCC------CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         76 STGK------DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        76 ~~~~------~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      +...      .+.+..++...+........-.....++|+|+++.|+ +-+..++|..+++
T Consensus       146 td~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~  206 (319)
T d2dg1a1         146 TDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIAL  206 (319)
T ss_dssp             EECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred             cccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecccCCceEEEEE
Confidence            6432      1235555554433332223334567899999998664 4455778888876

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.44  E-value=8.7e-06  Score=46.86  Aligned_cols=78  Identities=12%  Similarity=0.161  Sum_probs=55.7

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeC-C-----CcEEEEeCCCCCeEEeecc-------ccceEEEEEc
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGME-N-----SNVEVLHALKPDKYQLHLH-------ESCVLSLRFA   68 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~-----~~v~~~~~~~~~~~~~~~~-------~~~v~~~~~~   68 (131)
                      .+.|+.+++........+.....+|||||+.|+.... +     ..+.+++..+++...+...       ........|+
T Consensus        24 ~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~s  103 (281)
T d1k32a2          24 WEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFD  103 (281)
T ss_dssp             EEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEEC
T ss_pred             EEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccC
Confidence            4558888887766677788899999999999986532 2     2377778877776554322       2345678899


Q ss_pred             cCCCEEEEeCC
Q psy15612         69 ACGKWFVSTGK   79 (131)
Q Consensus        69 ~~~~~~~~~~~   79 (131)
                      |+|+.++....
T Consensus       104 pdg~~l~~~~~  114 (281)
T d1k32a2         104 PDGNLIISTDA  114 (281)
T ss_dssp             TTCCEEEEECT
T ss_pred             CCCCEEEEEEc
Confidence            99999887533

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.40  E-value=2.7e-05  Score=45.31  Aligned_cols=119  Identities=9%  Similarity=0.122  Sum_probs=83.3

Q ss_pred             Cceeeee--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEe--eccccceEEEEEccCCCEEEEeCCCCeEE
Q psy15612          9 GRQLQQH--DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQL--HLHESCVLSLRFAACGKWFVSTGKDNLLN   84 (131)
Q Consensus         9 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~i~   84 (131)
                      ++....+  ........+++.+++..+++....+.+.+++........+  ..+......+++.++++.+++....+.|+
T Consensus       102 g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~  181 (279)
T d1q7fa_         102 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK  181 (279)
T ss_dssp             SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred             ccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCceeecccccccccccceeeeccceeEEeeecccccee
Confidence            4444444  2334567888888898888777777788888765544443  23455678899999999888888889999


Q ss_pred             EeeCCCCceEEec---CCCCCeEEEEECCCCCEEEEecC-CCcEEEEE
Q psy15612         85 AWRTPYGASIFQS---KESSSVLSCDISADDKYIVTGSG-DKKATVYE  128 (131)
Q Consensus        85 ~w~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~  128 (131)
                      +||.. ++.+...   +....+..+++.++|+.+++-.. ++.|.+++
T Consensus       182 ~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~  228 (279)
T d1q7fa_         182 VFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT  228 (279)
T ss_dssp             EEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred             eeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC
Confidence            99975 5655322   24456889999999997776543 34577765

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.13  E-value=0.00014  Score=42.60  Aligned_cols=125  Identities=10%  Similarity=-0.028  Sum_probs=81.1

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-----cccceEEEEEccCCCEEEE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-----HESCVLSLRFAACGKWFVS   76 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~   76 (131)
                      ..||.++++. ..+.....+.++++.+++.++++ +.+ .+..+|..+++...+..     ....+.++.+.|+|+..++
T Consensus        43 ~r~d~~~g~~-~~~~~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~  119 (295)
T d2ghsa1          43 HELHLASGRK-TVHALPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIG  119 (295)
T ss_dssp             EEEETTTTEE-EEEECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEE
T ss_pred             EEEECCCCeE-EEEECCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEE
Confidence            3455555543 23445667888999888877665 444 48889999888654422     1235788999999997765


Q ss_pred             eCC----CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEE-EecCCCcEEEEEe
Q psy15612         77 TGK----DNLLNAWRTPYGASIFQSKESSSVLSCDISADDKYIV-TGSGDKKATVYEV  129 (131)
Q Consensus        77 ~~~----~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~vw~~  129 (131)
                      ...    .+.-.+|...+++.......-.....++|+++++.++ +-+..+.|..+++
T Consensus       120 ~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~  177 (295)
T d2ghsa1         120 TMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPL  177 (295)
T ss_dssp             EEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred             eccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEeee
Confidence            432    2234566666666553333344567899999998664 4455677777764

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.12  E-value=0.00017  Score=42.72  Aligned_cols=110  Identities=15%  Similarity=0.125  Sum_probs=72.9

Q ss_pred             CCeEEEEECCCCCEEEEEeC------CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEE-EeCCCCeEEEeeCCC-
Q psy15612         19 SQIFSLGYCPSGEWLAVGME------NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFV-STGKDNLLNAWRTPY-   90 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~i~~w~~~~-   90 (131)
                      ..+..+.+.|+|++.++...      .+.+..++........+...-.....++|+|+++.++ +-+..+.|..|++.. 
T Consensus       130 ~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~  209 (319)
T d2dg1a1         130 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD  209 (319)
T ss_dssp             CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             cCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCC
Confidence            34778999999987666432      1235555655555544444444567899999998765 446678899998753 


Q ss_pred             CceE--------EecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         91 GASI--------FQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        91 ~~~~--------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      +...        ...........+++.++|++.++...++.|.++|
T Consensus       210 g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~  255 (319)
T d2dg1a1         210 GVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN  255 (319)
T ss_dssp             SSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             CceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEEC
Confidence            2211        1112233467899999999887777788888876

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.11  E-value=0.00022  Score=44.00  Aligned_cols=127  Identities=11%  Similarity=-0.013  Sum_probs=85.1

Q ss_pred             EEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCC--------------------------------------cEEE
Q psy15612          3 LQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENS--------------------------------------NVEV   44 (131)
Q Consensus         3 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--------------------------------------~v~~   44 (131)
                      ..|.++.+........+....++++|+|+++++.+.+.                                      .+.+
T Consensus       177 ~ID~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~V  256 (459)
T d1fwxa2         177 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV  256 (459)
T ss_dssp             EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred             EEecCCceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCcee
Confidence            46777777776665556677899999999998876542                                      2334


Q ss_pred             EeCCCC---CeEEeeccccceEEEEEccCCCEEEEeC-CCCeEEEeeCCCCc-----------eE-EecCCCCCeEEEEE
Q psy15612         45 LHALKP---DKYQLHLHESCVLSLRFAACGKWFVSTG-KDNLLNAWRTPYGA-----------SI-FQSKESSSVLSCDI  108 (131)
Q Consensus        45 ~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~i~~w~~~~~~-----------~~-~~~~~~~~v~~~~~  108 (131)
                      .|.+..   .......-...+..+..+|||+++++++ -+.++.++|++.-.           .+ .....+-...+.+|
T Consensus       257 VD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~f  336 (459)
T d1fwxa2         257 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF  336 (459)
T ss_dssp             EECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEE
T ss_pred             ecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCcccccc
Confidence            444321   1111112223466899999999987654 47889999975211           11 22234666788999


Q ss_pred             CCCCCEEEEecCCCcEEEEEe
Q psy15612        109 SADDKYIVTGSGDKKATVYEV  129 (131)
Q Consensus       109 ~~~~~~l~~~~~d~~i~vw~~  129 (131)
                      +..|+-..+.--|.++.-|++
T Consensus       337 d~~g~aytslfids~v~kw~~  357 (459)
T d1fwxa2         337 DGRGNAYTSLFLDSQVVKWNI  357 (459)
T ss_dssp             CTTSEEEEEETTTTEEEEEEH
T ss_pred             CCCceEEEEeeccceEEEEec
Confidence            999876677778999999986

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.10  E-value=0.00018  Score=42.57  Aligned_cols=109  Identities=13%  Similarity=0.020  Sum_probs=67.6

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec-cc----cceEEEEEccCCCEEEEeCC---------------
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL-HE----SCVLSLRFAACGKWFVSTGK---------------   79 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~-~~----~~v~~~~~~~~~~~~~~~~~---------------   79 (131)
                      ....+.+.+++..++++.....+..++..+........ ..    ..+.++++.++|+..++-..               
T Consensus        72 ~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~  151 (314)
T d1pjxa_          72 IPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEK  151 (314)
T ss_dssp             CEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSS
T ss_pred             cceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccC
Confidence            46789999999988888777778888887654322211 11    13578999999998776422               


Q ss_pred             CCeEEEeeCCCCceEEecCCCCCeEEEEECCCCC-----EEEEecCCCcEEEEEe
Q psy15612         80 DNLLNAWRTPYGASIFQSKESSSVLSCDISADDK-----YIVTGSGDKKATVYEV  129 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d~~i~vw~~  129 (131)
                      .+.+..++.. ++.......-.....++|+|++.     ++++-+..+.|..+|+
T Consensus       152 ~G~v~~~~~d-g~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~  205 (314)
T d1pjxa_         152 FGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDI  205 (314)
T ss_dssp             CEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEE
T ss_pred             CceEEEEeec-CceeEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeec
Confidence            1234444433 44332222233456788888754     4445566777877775

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=5.5e-06  Score=51.84  Aligned_cols=102  Identities=5%  Similarity=-0.016  Sum_probs=69.5

Q ss_pred             EEECCCCCEEEEEeCCCcEEEEeCCCCCeEEee-c---cccceEEEEEccCCCEEEEeC---------CCCeEEEeeCCC
Q psy15612         24 LGYCPSGEWLAVGMENSNVEVLHALKPDKYQLH-L---HESCVLSLRFAACGKWFVSTG---------KDNLLNAWRTPY   90 (131)
Q Consensus        24 ~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~~~~~~---------~~~~i~~w~~~~   90 (131)
                      ..|.+++.++. -..++.+.++++.+++...+. .   ....+....||||+++++...         ..+.+.++|+.+
T Consensus        22 ~~W~~~~~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~  100 (465)
T d1xfda1          22 AKWISDTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH  100 (465)
T ss_dssp             CCBSSSSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred             CEEeCCCcEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccC
Confidence            46888876654 356778999999887754332 2   123566788999999987653         346788999998


Q ss_pred             CceEEec---CCCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy15612         91 GASIFQS---KESSSVLSCDISADDKYIVTGSGDKKATVY  127 (131)
Q Consensus        91 ~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw  127 (131)
                      +....+.   .....+....|||+|+.++.... +.+.+.
T Consensus       101 ~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~-~nl~~~  139 (465)
T d1xfda1         101 GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC  139 (465)
T ss_dssp             CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred             CceeeccCccCCccccceeeeccCCceEEEEec-ceEEEE
Confidence            8765332   23455667889999999887653 344443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.03  E-value=0.00034  Score=43.19  Aligned_cols=129  Identities=13%  Similarity=0.030  Sum_probs=77.2

Q ss_pred             EEEeCCCCceeeee--cCCCCeEEEEECC--CCCEEEEEeCCC------------------cEEEEeCCCCCeEEeeccc
Q psy15612          2 YLQSVSPGRQLQQH--DFSSQIFSLGYCP--SGEWLAVGMENS------------------NVEVLHALKPDKYQLHLHE   59 (131)
Q Consensus         2 ~iwd~~~~~~~~~~--~~~~~v~~~~~~~--~~~~l~~~~~~~------------------~v~~~~~~~~~~~~~~~~~   59 (131)
                      .+-|+++.++.+..  .....+-.+...+  .-.+++..+.+.                  .+..+|..+.+......-.
T Consensus       113 AvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~  192 (459)
T d1fwxa2         113 ARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS  192 (459)
T ss_dssp             EEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEEETTTTEEEEEEEES
T ss_pred             EEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEEecCCceEEEEeeeC
Confidence            34577777775544  4445566666654  444566554422                  2556788776653222233


Q ss_pred             cceEEEEEccCCCEEEEeCCCC---------------eE-----------------------EEeeCCCC---ceEEecC
Q psy15612         60 SCVLSLRFAACGKWFVSTGKDN---------------LL-----------------------NAWRTPYG---ASIFQSK   98 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~~~~~~---------------~i-----------------------~~w~~~~~---~~~~~~~   98 (131)
                      .....+.++++|+++++.+.+.               .+                       .+.|.++.   ......+
T Consensus       193 g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIP  272 (459)
T d1fwxa2         193 GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP  272 (459)
T ss_dssp             SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEE
T ss_pred             CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCceeecccccCCcceeEEEe
Confidence            4567899999999988775431               12                       33333221   1112223


Q ss_pred             CCCCeEEEEECCCCCEEEEecC-CCcEEEEEee
Q psy15612         99 ESSSVLSCDISADDKYIVTGSG-DKKATVYEVI  130 (131)
Q Consensus        99 ~~~~v~~~~~~~~~~~l~~~~~-d~~i~vw~~~  130 (131)
                      .+.....+.++|||+++++++. +.++.|+|++
T Consensus       273 VpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~  305 (459)
T d1fwxa2         273 IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT  305 (459)
T ss_dssp             EESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred             cCCCCCceEECCCCCEEEEeCCcCCcEEEEEeh
Confidence            3445678899999999877665 8899999874

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.85  E-value=0.0006  Score=39.90  Aligned_cols=112  Identities=11%  Similarity=-0.008  Sum_probs=72.7

Q ss_pred             EeCCCCceeeeecCCCCeEEEEECCCCCEEEE-EeCCCcEEEEeCCCCC------eEE---eeccccceEEEEEccCCCE
Q psy15612          4 QSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAV-GMENSNVEVLHALKPD------KYQ---LHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         4 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~v~~~~~~~~~------~~~---~~~~~~~v~~~~~~~~~~~   73 (131)
                      |...+++.......-...+.+.|+++++.+.. .+..+.|..+++....      ...   .......+..+++.++|+.
T Consensus       133 ~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~Gnl  212 (295)
T d2ghsa1         133 YHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI  212 (295)
T ss_dssp             EEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE
T ss_pred             eeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCE
Confidence            34444544433333345678999999987654 4557778888764221      111   1234556788999999998


Q ss_pred             EEEeCCCCeEEEeeCCCCceE-EecCCCCCeEEEEEC-CCCCEEE
Q psy15612         74 FVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDIS-ADDKYIV  116 (131)
Q Consensus        74 ~~~~~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~-~~~~~l~  116 (131)
                      .++.-..+.|..||. +|+.+ ...-....+++++|- |+.+.|+
T Consensus       213 Wva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~Ly  256 (295)
T d2ghsa1         213 WNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLL  256 (295)
T ss_dssp             EEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEE
T ss_pred             EeeeeCCCceEEecC-CCcEeeEecCCCCceEEEEEeCCCCCEEE
Confidence            877666788999996 47766 333344678999995 5656554

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.45  E-value=0.0022  Score=39.43  Aligned_cols=97  Identities=13%  Similarity=0.153  Sum_probs=60.7

Q ss_pred             eEEEEECCCCCEEEEE-----eCCCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCC----------------
Q psy15612         21 IFSLGYCPSGEWLAVG-----MENSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGK----------------   79 (131)
Q Consensus        21 v~~~~~~~~~~~l~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------------   79 (131)
                      +....++|++++++.+     +....++++|+.+++.....-.......+.|.+|++.|+....                
T Consensus       127 ~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~  206 (430)
T d1qfma1         127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL  206 (430)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred             ecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccccccceEEcCCCCEEEEEEeccccCcccccccccCC
Confidence            4567889999988754     2234699999999885322111122357889999997764322                


Q ss_pred             CCeEEEeeCCCCceE---EecC--CCCCeEEEEECCCCCEEEE
Q psy15612         80 DNLLNAWRTPYGASI---FQSK--ESSSVLSCDISADDKYIVT  117 (131)
Q Consensus        80 ~~~i~~w~~~~~~~~---~~~~--~~~~v~~~~~~~~~~~l~~  117 (131)
                      ...+..+.+.+....   ....  .......+..++++++++.
T Consensus       207 ~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i  249 (430)
T d1qfma1         207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLL  249 (430)
T ss_dssp             CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred             cceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeE
Confidence            224666777654332   2222  2345667788999998754

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.31  E-value=0.005  Score=36.78  Aligned_cols=110  Identities=14%  Similarity=0.074  Sum_probs=70.3

Q ss_pred             CeEEEEECCCCCEEEEEeCCC-----------cEEEEeCCCCCeEE---e-eccccceEEEEEccCCCEEEEeCCC-CeE
Q psy15612         20 QIFSLGYCPSGEWLAVGMENS-----------NVEVLHALKPDKYQ---L-HLHESCVLSLRFAACGKWFVSTGKD-NLL   83 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~-----------~v~~~~~~~~~~~~---~-~~~~~~v~~~~~~~~~~~~~~~~~~-~~i   83 (131)
                      ++.......+|+.++.|+...           .+.+||..++....   . ..+........+.++|+.++.++.+ ..+
T Consensus        21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~  100 (387)
T d1k3ia3          21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT  100 (387)
T ss_dssp             CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred             ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcce
Confidence            334444566888888877421           26789998776322   1 2233334456788999998888655 578


Q ss_pred             EEeeCCCCceEEec--CCCCCeEEEEECCCCCEEEEecCC------CcEEEEEe
Q psy15612         84 NAWRTPYGASIFQS--KESSSVLSCDISADDKYIVTGSGD------KKATVYEV  129 (131)
Q Consensus        84 ~~w~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d------~~i~vw~~  129 (131)
                      .+||..+.......  .....-...+..++|++++.++.+      ..+.+||+
T Consensus       101 ~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~  154 (387)
T d1k3ia3         101 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP  154 (387)
T ss_dssp             EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred             eEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecC
Confidence            99999887766222  122223466777899988887642      24677765

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.89  E-value=0.015  Score=34.71  Aligned_cols=93  Identities=9%  Similarity=-0.055  Sum_probs=60.9

Q ss_pred             EEEeCCCCceeee--e--cCCCCeEEEEECCCCCEEEEEeCC-CcEEEEeCCCCCeEEeec--cccceEEEEEccCCCEE
Q psy15612          2 YLQSVSPGRQLQQ--H--DFSSQIFSLGYCPSGEWLAVGMEN-SNVEVLHALKPDKYQLHL--HESCVLSLRFAACGKWF   74 (131)
Q Consensus         2 ~iwd~~~~~~~~~--~--~~~~~v~~~~~~~~~~~l~~~~~~-~~v~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~   74 (131)
                      .+||..+++-...  .  .+........+.++++.++.|+.+ ..+.+||..+..-.....  ....-...+..+||+.+
T Consensus        55 ~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~  134 (387)
T d1k3ia3          55 SSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVF  134 (387)
T ss_dssp             EEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEE
T ss_pred             EEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCcee
Confidence            4788887654322  1  233334456788999998887654 579999998776533321  12223456677899998


Q ss_pred             EEeCCC------CeEEEeeCCCCceE
Q psy15612         75 VSTGKD------NLLNAWRTPYGASI   94 (131)
Q Consensus        75 ~~~~~~------~~i~~w~~~~~~~~   94 (131)
                      +.++..      +.+.+||..+.+..
T Consensus       135 v~GG~~~~~~~~~~v~~yd~~~~~W~  160 (387)
T d1k3ia3         135 TIGGSWSGGVFEKNGEVYSPSSKTWT  160 (387)
T ss_dssp             EECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred             eeccccccccccceeeeecCCCCcee
Confidence            887653      35889998877654

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.38  E-value=0.035  Score=32.67  Aligned_cols=90  Identities=10%  Similarity=0.148  Sum_probs=58.7

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--eEEeecc----ccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPD--KYQLHLH----ESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~--~~~~~~~----~~~v~~~~~~~~~~~~   74 (131)
                      ++++|+++.+.++.+...+.|.-..|-.+. .|+.... ..|+-|++++..  ...+..|    ...|..-.-+++++++
T Consensus        85 LQiFnletK~klks~~~~e~VvfWkWis~~-~L~lVT~-taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~  162 (327)
T d1utca2          85 LQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWL  162 (327)
T ss_dssp             EEEEETTTTEEEEEEECSSCCCEEEESSSS-EEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEE
T ss_pred             EEEEehhHhhhhceEEcCCCcEEEEecCCC-EEEEEcC-CceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEE
Confidence            478999999999999888899999997544 4444433 469999986433  2223333    2456667777888876


Q ss_pred             EEe---CC----CCeEEEeeCCCCc
Q psy15612         75 VST---GK----DNLLNAWRTPYGA   92 (131)
Q Consensus        75 ~~~---~~----~~~i~~w~~~~~~   92 (131)
                      +..   ..    .|.+.+|..+.+.
T Consensus       163 ~l~GI~~~~~~i~G~mQLYS~er~~  187 (327)
T d1utca2         163 LLTGISAQQNRVVGAMQLYSVDRKV  187 (327)
T ss_dssp             EEEEEEEETTEEEEEEEEEETTTTE
T ss_pred             EEEeEecCCCceeEEEEEEEeccCc
Confidence            542   22    2456777655443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.37  E-value=0.019  Score=36.73  Aligned_cols=77  Identities=13%  Similarity=0.183  Sum_probs=44.3

Q ss_pred             CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC-EEE
Q psy15612         40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK-YIV  116 (131)
Q Consensus        40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~  116 (131)
                      +.+.-+|+.++++.-......+...-..+-.+..++.++.|+.++-+|..+|+.+  +..+....-.-+.+..+|+ |++
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv~  545 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG  545 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            3466677777765211111111121112335667778999999999999999999  3333222222255666786 444

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.067  Score=30.53  Aligned_cols=118  Identities=4%  Similarity=-0.146  Sum_probs=73.0

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEe-CCCcEEEEeCCCCC----eEE-eeccccceEEEEEccCCCEE
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGM-ENSNVEVLHALKPD----KYQ-LHLHESCVLSLRFAACGKWF   74 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~v~~~~~~~~~----~~~-~~~~~~~v~~~~~~~~~~~~   74 (131)
                      |+..++.+.+..........+.+++|++..+.+.-.. ..+.+...++....    ... +......+..+++.+.+..+
T Consensus        12 I~~~~l~~~~~~~~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~l   91 (266)
T d1ijqa1          12 VRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNI   91 (266)
T ss_dssp             EEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEE
T ss_pred             EEEEECCCCcceeeeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceE
Confidence            3456776655554455556788899998888776654 34556655654322    122 22333456788888766655


Q ss_pred             EEe-CCCCeEEEeeCCCCceE-EecCCCCCeEEEEECCCCCEEEEe
Q psy15612         75 VST-GKDNLLNAWRTPYGASI-FQSKESSSVLSCDISADDKYIVTG  118 (131)
Q Consensus        75 ~~~-~~~~~i~~w~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~  118 (131)
                      +.+ ...+.|.+.++...... ........+..++++|...++...
T Consensus        92 Y~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~  137 (266)
T d1ijqa1          92 YWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWT  137 (266)
T ss_dssp             EEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred             EEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEe
Confidence            544 55678999998765544 444455678889998866655443

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.54  E-value=0.073  Score=33.96  Aligned_cols=45  Identities=18%  Similarity=0.104  Sum_probs=30.3

Q ss_pred             CCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCE
Q psy15612         70 CGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKY  114 (131)
Q Consensus        70 ~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~  114 (131)
                      .+..++.++.|+.++-+|.++|+.+  ...+....-.-+.+..+|+.
T Consensus       474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq  520 (571)
T d2ad6a1         474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ  520 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence            3556777899999999999999999  33332222222455557764

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=95.49  E-value=0.03  Score=35.72  Aligned_cols=51  Identities=12%  Similarity=0.052  Sum_probs=36.8

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCe
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDK   52 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~   52 (131)
                      .-||+.+++.+.......+...=..+..+.+++.++.|+.++.+|.++++.
T Consensus       460 ~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~  510 (573)
T d1kb0a2         460 LAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK  510 (573)
T ss_dssp             EEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             EEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcE
Confidence            457888999887774433322212233677888899999999999999996

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.38  E-value=0.022  Score=36.48  Aligned_cols=75  Identities=8%  Similarity=0.103  Sum_probs=46.8

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-e-eccccceEEEEEccCCC-EEEE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-L-HLHESCVLSLRFAACGK-WFVS   76 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~-~~~~   76 (131)
                      .-+|+.+|+.+.......++..=..+..+..++.++.|+.++-+|.+++++.- . ......-.-+.|..+|+ +++.
T Consensus       469 ~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv~i  546 (582)
T d1flga_         469 RAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV  546 (582)
T ss_dssp             EEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             EEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEE
Confidence            45788889888777433333322223467788889999999999999999632 1 11111122366667886 4443

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.19  E-value=0.028  Score=36.11  Aligned_cols=74  Identities=7%  Similarity=0.003  Sum_probs=45.2

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE-e-eccccceEEEEEccCCCE-EE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ-L-HLHESCVLSLRFAACGKW-FV   75 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~-~~   75 (131)
                      .-||..+++.+...........=.++..+.+++.|..|+.++-+|.++++..- + ......-.-+.|..+|+. ++
T Consensus       456 ~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQYva  532 (596)
T d1w6sa_         456 KAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVA  532 (596)
T ss_dssp             EEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             EEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEEEE
Confidence            45788889887665333332222223357788889999999999999999621 1 111112223555567774 44

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.19  E-value=0.031  Score=35.67  Aligned_cols=72  Identities=7%  Similarity=-0.041  Sum_probs=44.1

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEE--eeccccceEEEEEccCCCE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQ--LHLHESCVLSLRFAACGKW   73 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~   73 (131)
                      .-+|+++++.+..........+-.....+.+++.++.|+.++-+|.++++..-  -......-.-+.|..||+.
T Consensus       447 ~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq  520 (571)
T d2ad6a1         447 RAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ  520 (571)
T ss_dssp             EEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             EEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence            45788888888766333322211122356678889999999999999998632  1122222223566668874

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=95.06  E-value=0.05  Score=34.60  Aligned_cols=75  Identities=9%  Similarity=0.116  Sum_probs=45.9

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeE-Eee-ccccceEEEEEccCCC-EEEE
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKY-QLH-LHESCVLSLRFAACGK-WFVS   76 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~-~~~-~~~~~v~~~~~~~~~~-~~~~   76 (131)
                      .-+|+.+++.+...........-.+...+.+++.++.|+.++-+|..+++.. ++. .....-.-+.+..+|+ +++.
T Consensus       441 ~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~v  518 (560)
T d1kv9a2         441 LAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAI  518 (560)
T ss_dssp             EEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             EEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEE
Confidence            4578899988877643333322222335678888999999999999999963 111 1111112355556786 4443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.86  E-value=0.14  Score=31.22  Aligned_cols=76  Identities=5%  Similarity=0.024  Sum_probs=47.2

Q ss_pred             CEEEeCCCCceeeeecCCCCeEEEEECCCCCEEEEEeCC----------------CcEEEEeCCCCCe---EEeec--cc
Q psy15612          1 MYLQSVSPGRQLQQHDFSSQIFSLGYCPSGEWLAVGMEN----------------SNVEVLHALKPDK---YQLHL--HE   59 (131)
Q Consensus         1 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------------~~v~~~~~~~~~~---~~~~~--~~   59 (131)
                      |+++|+++++.+...-.......+.|.+|++.++....+                ..+..+.+.+...   .....  ..
T Consensus       153 l~v~Dl~tg~~~~~~i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~  232 (430)
T d1qfma1         153 IKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEP  232 (430)
T ss_dssp             EEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred             eEEeccCcceecccccccccccceEEcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCC
Confidence            578999999876433111223568899999987665332                2477777766542   22222  22


Q ss_pred             cceEEEEEccCCCEEEE
Q psy15612         60 SCVLSLRFAACGKWFVS   76 (131)
Q Consensus        60 ~~v~~~~~~~~~~~~~~   76 (131)
                      ..+..+..++++++++.
T Consensus       233 ~~~~~~~~s~d~~~l~i  249 (430)
T d1qfma1         233 KWMGGAELSDDGRYVLL  249 (430)
T ss_dssp             TCEEEEEECTTSCEEEE
T ss_pred             ceEEeeeccCCcceeeE
Confidence            34667778999998764

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.80  E-value=0.22  Score=30.72  Aligned_cols=104  Identities=11%  Similarity=0.092  Sum_probs=61.6

Q ss_pred             cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCeEEeec---------cccceEEEEEccC---CCEEEEe-C----
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGMENSNVEVLHALKPDKYQLHL---------HESCVLSLRFAAC---GKWFVST-G----   78 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~---~~~~~~~-~----   78 (131)
                      ..-....+|+|.|+++++++.-..|.|.+++..++....+..         -+.....++++|+   ..+++.+ +    
T Consensus        24 ~~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~  103 (450)
T d1crua_          24 SNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP  103 (450)
T ss_dssp             CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred             CCCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCC
Confidence            334678899999999988776457899999887776533221         2345678999985   3344432 1    


Q ss_pred             --CC----Ce--EEEeeCCCCc-------eEE---ecCCCCCeEEEEECCCCCEEEEec
Q psy15612         79 --KD----NL--LNAWRTPYGA-------SIF---QSKESSSVLSCDISADDKYIVTGS  119 (131)
Q Consensus        79 --~~----~~--i~~w~~~~~~-------~~~---~~~~~~~v~~~~~~~~~~~l~~~~  119 (131)
                        .+    +.  +..+......       .+.   .....+.-..+.|.|++.++++.+
T Consensus       104 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~G  162 (450)
T d1crua_         104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (450)
T ss_dssp             TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             CCcccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEec
Confidence              01    11  2222222111       110   112235567899999998776655

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=94.42  E-value=0.11  Score=33.09  Aligned_cols=54  Identities=13%  Similarity=0.057  Sum_probs=34.2

Q ss_pred             cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE
Q psy15612         41 NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI   94 (131)
Q Consensus        41 ~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~   94 (131)
                      .+.-+|+.+++..=..........=..+-.+..++.++.|+.++.+|..+|+.+
T Consensus       458 ~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~L  511 (573)
T d1kb0a2         458 RLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL  511 (573)
T ss_dssp             EEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEe
Confidence            466778877775211111111111112335777778899999999999999999

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=94.32  E-value=0.089  Score=33.78  Aligned_cols=75  Identities=13%  Similarity=0.130  Sum_probs=41.7

Q ss_pred             CcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCCE
Q psy15612         40 SNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDKY  114 (131)
Q Consensus        40 ~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~~  114 (131)
                      +.+.-||+.+++..-...+......-.++-.|..++.++.|+.++-+|..+|+.+  +.......-.=+.+..+|+.
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQ  529 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ  529 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ceEEEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEE
Confidence            3466677777764211111111111112234667778999999999999999999  33332222122444457763

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=94.13  E-value=0.14  Score=32.54  Aligned_cols=77  Identities=8%  Similarity=0.116  Sum_probs=42.2

Q ss_pred             cEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceE--EecCCCCCeEEEEECCCCC-EEEE
Q psy15612         41 NVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISADDK-YIVT  117 (131)
Q Consensus        41 ~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~  117 (131)
                      .+.-+|+.+++..-..........-.++-.+..++.++.|+.++-+|..+|+.+  +.......-.-+.+..+|+ +++.
T Consensus       439 ~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~v  518 (560)
T d1kv9a2         439 ALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAI  518 (560)
T ss_dssp             EEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             ceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEE
Confidence            466677777764211111111111112224566778899999999999999999  3333221111244455776 4443

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.74  E-value=0.28  Score=27.83  Aligned_cols=111  Identities=7%  Similarity=-0.103  Sum_probs=68.0

Q ss_pred             CCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCeEEeec-cccceEEEEEccCCCEEEEeCC---CCeEEEeeCCCCce
Q psy15612         19 SQIFSLGYCPSGEWLAVG-MENSNVEVLHALKPDKYQLHL-HESCVLSLRFAACGKWFVSTGK---DNLLNAWRTPYGAS   93 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~---~~~i~~w~~~~~~~   93 (131)
                      ..+..+++..-+..|..+ ...+.|.+.++.......+.. ....+..+++.|...+++-...   ...|..-++.....
T Consensus        79 ~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~  158 (263)
T d1npea_          79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (263)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc
Confidence            467788887666666544 456688889988766544433 3356889999997666654322   22344445554333


Q ss_pred             E-EecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEe
Q psy15612         94 I-FQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEV  129 (131)
Q Consensus        94 ~-~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~  129 (131)
                      . .....-..+..+++.+.++.|+.+ ...+.|...|+
T Consensus       159 ~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~  196 (263)
T d1npea_         159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP  196 (263)
T ss_dssp             EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             eeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEEC
Confidence            3 333334567889998877766544 44566665543

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=93.03  E-value=0.46  Score=28.13  Aligned_cols=98  Identities=7%  Similarity=-0.058  Sum_probs=58.0

Q ss_pred             CCeEEEEECCCCCEEEEEeC---------------CCcEEEEeCCCCCeEEeeccccceEEEEEccCCCEEEEe-CCCCe
Q psy15612         19 SQIFSLGYCPSGEWLAVGME---------------NSNVEVLHALKPDKYQLHLHESCVLSLRFAACGKWFVST-GKDNL   82 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~---------------~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~   82 (131)
                      ...+.+.+..++.++++-..               .+.-.++.............-.....++++||++.++.+ +..+.
T Consensus       150 ~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~  229 (340)
T d1v04a_         150 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHK  229 (340)
T ss_dssp             SSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred             cCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEEcCCCCccceeEECCCCCEEEEEeCCCCe
Confidence            34677777777877776311               112334444444443333334567899999999877654 66778


Q ss_pred             EEEeeCCCCceE---EecCCCCCeEEEEECC-CCCEEE
Q psy15612         83 LNAWRTPYGASI---FQSKESSSVLSCDISA-DDKYIV  116 (131)
Q Consensus        83 i~~w~~~~~~~~---~~~~~~~~v~~~~~~~-~~~~l~  116 (131)
                      |+.|++......   ....-+..+-.+.+.+ +|.+.+
T Consensus       230 i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwv  267 (340)
T d1v04a_         230 IHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWV  267 (340)
T ss_dssp             EEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred             EEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEE
Confidence            999888643322   2223455666777765 444433

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.61  E-value=0.45  Score=26.97  Aligned_cols=109  Identities=9%  Similarity=-0.077  Sum_probs=64.1

Q ss_pred             CCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCCce
Q psy15612         19 SQIFSLGYCPSGEWLAVGMEN---SNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYGAS   93 (131)
Q Consensus        19 ~~v~~~~~~~~~~~l~~~~~~---~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~~~   93 (131)
                      ..+..++++|...++......   ..|...++.......+. ..-..+..+++.+.++.++-+ ...+.|...++.....
T Consensus       122 ~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~  201 (263)
T d1npea_         122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR  201 (263)
T ss_dssp             SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred             cCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCe
Confidence            567889998877776654322   23555566655543333 233567889998877776554 5667888888875544


Q ss_pred             EEecCCCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         94 IFQSKESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      .........+..+++. ++.+..+-...+.|...|
T Consensus       202 ~~v~~~~~~P~~lav~-~~~lYwtd~~~~~I~~~~  235 (263)
T d1npea_         202 RKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMD  235 (263)
T ss_dssp             EEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred             EEEECCCCCcEEEEEE-CCEEEEEECCCCEEEEEE
Confidence            4222222345677775 333334434455565544

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.87  E-value=0.67  Score=27.29  Aligned_cols=125  Identities=6%  Similarity=0.082  Sum_probs=74.1

Q ss_pred             EEEeCCCCceeeeecCCCCeEEEEECC--CCC-EEEEEe---CCCcEEEEeCCCCC---e----EE--ee----ccccce
Q psy15612          2 YLQSVSPGRQLQQHDFSSQIFSLGYCP--SGE-WLAVGM---ENSNVEVLHALKPD---K----YQ--LH----LHESCV   62 (131)
Q Consensus         2 ~iwd~~~~~~~~~~~~~~~v~~~~~~~--~~~-~l~~~~---~~~~v~~~~~~~~~---~----~~--~~----~~~~~v   62 (131)
                      ++|..+.+.....-+|.+.-..+.+..  +.. .++.+.   ..+++.+.++....   .    ..  +.    .....+
T Consensus       179 QLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFP  258 (327)
T d1utca2         179 QLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP  258 (327)
T ss_dssp             EEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCE
T ss_pred             EEEEeccCcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcE
Confidence            566666443333335555444444422  222 223222   23578888886422   1    11  11    113346


Q ss_pred             EEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec-CCCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy15612         63 LSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISADDKYIVTGSGDKKATV  126 (131)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v  126 (131)
                      ..+..++.-..++.-+.-|.++++|+.++.+++.. -..+.|...+-.....-++....+|.+.-
T Consensus       259 vamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         259 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             EEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred             EEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeEEE
Confidence            67888888888888899999999999999999444 35666665555555555656667777643

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.69  E-value=0.61  Score=26.43  Aligned_cols=112  Identities=10%  Similarity=-0.029  Sum_probs=66.7

Q ss_pred             cCCCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCeEEee-ccccceEEEEEccCCCEEEEe-CCCCeEEEeeCCCC
Q psy15612         16 DFSSQIFSLGYCPSGEWLAVGM--ENSNVEVLHALKPDKYQLH-LHESCVLSLRFAACGKWFVST-GKDNLLNAWRTPYG   91 (131)
Q Consensus        16 ~~~~~v~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~-~~~~~i~~w~~~~~   91 (131)
                      ........++++|...++....  ..+.|...++.......+. ..-..+..+++.+.+..++-+ ...+.|...++...
T Consensus       117 ~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~  196 (266)
T d1ijqa1         117 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG  196 (266)
T ss_dssp             CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCC
Confidence            3445678899988666665543  3345777777766655443 233567889999877766655 55678888888654


Q ss_pred             ceE-EecC--CCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy15612         92 ASI-FQSK--ESSSVLSCDISADDKYIVTGSGDKKATVYE  128 (131)
Q Consensus        92 ~~~-~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~vw~  128 (131)
                      ... ....  ....+..+++. .+..+.+-..++.|...+
T Consensus       197 ~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~  235 (266)
T d1ijqa1         197 NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSAN  235 (266)
T ss_dssp             SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred             CEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEEEE
Confidence            433 2222  23456677775 233333433455554443

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=89.36  E-value=1.5  Score=27.01  Aligned_cols=54  Identities=7%  Similarity=0.036  Sum_probs=39.3

Q ss_pred             cccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEec---------CCCCCeEEEEECCC
Q psy15612         58 HESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQS---------KESSSVLSCDISAD  111 (131)
Q Consensus        58 ~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~~---------~~~~~v~~~~~~~~  111 (131)
                      .-....+++|.|||+.+++--..+.|++++..+++.....         ...+....++++|+
T Consensus        25 ~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            3456789999999998877755789999998877654111         12355788999985

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.58  E-value=1.9  Score=26.07  Aligned_cols=96  Identities=11%  Similarity=-0.021  Sum_probs=62.5

Q ss_pred             CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-eEEeeccccceEEEEEccCCCEEEEeCCCCeEEEeeCCCCceEEe--
Q psy15612         20 QIFSLGYCPSGEWLAVGMENSNVEVLHALKPD-KYQLHLHESCVLSLRFAACGKWFVSTGKDNLLNAWRTPYGASIFQ--   96 (131)
Q Consensus        20 ~v~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~w~~~~~~~~~~--   96 (131)
                      .|..++|+-+  .++... ++.+..++...-. ..........+.++.++|.  .++....++.+.++++.+++....  
T Consensus        88 ~v~~vafs~d--~l~v~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~  162 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVST-RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQ  162 (381)
T ss_dssp             TEEEEEEETT--EEEEEE-SSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CeEEEEeeCC--EEEEEe-CCCEEEEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccC
Confidence            5788888644  444443 3457777776543 2333334556778887764  455566678888899888765411  


Q ss_pred             ----cCCCCCeEEEEECCCCCEEEEecC
Q psy15612         97 ----SKESSSVLSCDISADDKYIVTGSG  120 (131)
Q Consensus        97 ----~~~~~~v~~~~~~~~~~~l~~~~~  120 (131)
                          ....+.+.+++|++.|..++++..
T Consensus       163 ~v~~~~~~~~~~~v~ws~kgkq~v~~~g  190 (381)
T d1xipa_         163 NVTSFDVTNSQLAVLLKDRSFQSFAWRN  190 (381)
T ss_dssp             SEEEEEECSSEEEEEETTSCEEEEEEET
T ss_pred             CcceEEecCCceEEEEeCCcEEEEEeCC
Confidence                123477899999999998887643

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=87.05  E-value=1.8  Score=25.48  Aligned_cols=104  Identities=15%  Similarity=0.054  Sum_probs=59.8

Q ss_pred             CCCCCE-EEEEe---CCCcEEEEeCCCCC--eE---Eee-ccccceEEEEEccCCCEEEEeCC--C-------------C
Q psy15612         27 CPSGEW-LAVGM---ENSNVEVLHALKPD--KY---QLH-LHESCVLSLRFAACGKWFVSTGK--D-------------N   81 (131)
Q Consensus        27 ~~~~~~-l~~~~---~~~~v~~~~~~~~~--~~---~~~-~~~~~v~~~~~~~~~~~~~~~~~--~-------------~   81 (131)
                      .++++. |++..   ...+|.+|++....  ..   .+. .....+.++....++..+++-..  .             .
T Consensus       107 ~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~  186 (340)
T d1v04a_         107 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLA  186 (340)
T ss_dssp             CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCC
T ss_pred             cCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCC
Confidence            445553 33332   34568888775332  21   111 12345788999889987777321  1             1


Q ss_pred             eEEEeeCCCCceEEecCCCCCeEEEEECCCCCEEEEe-cCCCcEEEEEee
Q psy15612         82 LLNAWRTPYGASIFQSKESSSVLSCDISADDKYIVTG-SGDKKATVYEVI  130 (131)
Q Consensus        82 ~i~~w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~vw~~~  130 (131)
                      ...+|....++.......-.....++++|++++++.+ ...++|++|++.
T Consensus       187 ~g~v~~~~~~~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~  236 (340)
T d1v04a_         187 WSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH  236 (340)
T ss_dssp             CEEEEEECSSCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             ceeEEEEcCCceEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeC
Confidence            2344444434443333334668899999999877544 456788888763