Psyllid ID: psy15747


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220----
IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKAKAGHASPVQPPQSWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVSLSDDIKRIS
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
ccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
iafahllpNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDihstsgkakaghaspvqppqswthvrwldptctymrihwcvpKMVLFWQLSELNTFFLKHifemppshpivIIRLSFLGimvapsarqyYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKngkllfgrTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVSLsddikris
IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKakaghaspvqppqswtHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVsvslsddikris
IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKAKAGHASPVQPPQSWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVSLSDDIKRIS
**FAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIH******************SWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVSL********
IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKD********KAGHASPVQPPQSWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRY*************
IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDI******************QSWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVSLSDDIKRIS
IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKAKAGHASPVQPPQSWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYV************
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
ooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
oooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
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IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKAKAGHASPVQPPQSWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVSLSDDIKRIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query224 2.2.26 [Sep-21-2011]
Q5ZM65473 Phosphatidylserine syntha yes N/A 0.955 0.452 0.518 5e-62
Q803C9465 Phosphatidylserine syntha no N/A 0.883 0.425 0.557 9e-62
Q99LH2473 Phosphatidylserine syntha yes N/A 0.955 0.452 0.509 2e-60
Q5PQL5473 Phosphatidylserine syntha yes N/A 0.955 0.452 0.509 2e-60
Q00576471 Phosphatidylserine syntha yes N/A 0.955 0.454 0.509 2e-60
Q2KHY9473 Phosphatidylserine syntha yes N/A 0.955 0.452 0.509 3e-60
P48651473 Phosphatidylserine syntha yes N/A 0.955 0.452 0.504 4e-60
B1H3H9465 Phosphatidylserine syntha yes N/A 0.919 0.443 0.521 1e-59
Q08D11474 Phosphatidylserine syntha yes N/A 0.75 0.354 0.381 1e-27
Q9BVG9487 Phosphatidylserine syntha no N/A 0.75 0.344 0.381 2e-27
>sp|Q5ZM65|PTSS1_CHICK Phosphatidylserine synthase 1 OS=Gallus gallus GN=PTDSS1 PE=2 SV=2 Back     alignment and function desciption
 Score =  237 bits (604), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 115/222 (51%), Positives = 154/222 (69%), Gaps = 8/222 (3%)

Query: 3   FAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKAKA 62
           F HLLPNF ECWWD +ILDILLCNG GIW+G+ +C++ EMR Y W S KDIH+T+GK K 
Sbjct: 203 FMHLLPNFAECWWDQVILDILLCNGGGIWLGMVVCRFLEMRTYHWASFKDIHTTTGKIK- 261

Query: 63  GHASPVQPPQSWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPI 122
             A     P SWT+VRW DP  ++ R+      M++ WQL+ELNTFFLKHIF    SHP+
Sbjct: 262 -RAVLQFTPASWTYVRWFDPKSSFQRVAGIYLFMII-WQLTELNTFFLKHIFVFQASHPL 319

Query: 123 VIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFGRT 182
              R+ F+GI+ AP+ RQYY+++TDTQCKR+GTQCW++G I   EA++CIK G+ LF +T
Sbjct: 320 SWGRILFIGIITAPTVRQYYAYLTDTQCKRVGTQCWVFGVIAFLEAIVCIKFGQDLFSKT 379

Query: 183 QAVNILAWLSVMFLLAVLCVYGCVLW-----HRYVSVSLSDD 219
           Q + ++ WL  +     LC+YG V +     HR  ++S S+D
Sbjct: 380 QILYVVFWLLCVAFTTFLCLYGMVWYAEYYGHREKTLSESED 421




Catalyzes a base-exchange reaction in which the polar head group of phosphatidylethanolamine (PE) or phosphatidylcholine (PC) is replaced by L-serine. In membranes, PTDSS1 catalyzes mainly the conversion of phosphatidylcholine. Also converts, in vitro and to a lesser extent, phosphatidylethanolamine.
Gallus gallus (taxid: 9031)
EC: 2EC: .EC: 7EC: .EC: 8EC: .EC: 2EC: 9
>sp|Q803C9|PTSS1_DANRE Phosphatidylserine synthase 1 OS=Danio rerio GN=ptdss1 PE=2 SV=2 Back     alignment and function description
>sp|Q99LH2|PTSS1_MOUSE Phosphatidylserine synthase 1 OS=Mus musculus GN=Ptdss1 PE=2 SV=1 Back     alignment and function description
>sp|Q5PQL5|PTSS1_RAT Phosphatidylserine synthase 1 OS=Rattus norvegicus GN=Ptdss1 PE=2 SV=1 Back     alignment and function description
>sp|Q00576|PTSS1_CRIGR Phosphatidylserine synthase 1 OS=Cricetulus griseus GN=PTDSS1 PE=2 SV=1 Back     alignment and function description
>sp|Q2KHY9|PTSS1_BOVIN Phosphatidylserine synthase 1 OS=Bos taurus GN=PTDSS1 PE=2 SV=1 Back     alignment and function description
>sp|P48651|PTSS1_HUMAN Phosphatidylserine synthase 1 OS=Homo sapiens GN=PTDSS1 PE=1 SV=1 Back     alignment and function description
>sp|B1H3H9|PTSS1_XENTR Phosphatidylserine synthase 1 OS=Xenopus tropicalis GN=ptdss1 PE=2 SV=1 Back     alignment and function description
>sp|Q08D11|PTSS2_XENTR Phosphatidylserine synthase 2 OS=Xenopus tropicalis GN=ptdss2 PE=2 SV=2 Back     alignment and function description
>sp|Q9BVG9|PTSS2_HUMAN Phosphatidylserine synthase 2 OS=Homo sapiens GN=PTDSS2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query224
307196029 463 Phosphatidylserine synthase 1 [Harpegnat 0.977 0.473 0.653 2e-82
307189785 453 Phosphatidylserine synthase 1 [Camponotu 0.977 0.483 0.657 6e-82
158300473 501 AGAP012146-PA [Anopheles gambiae str. PE 0.964 0.431 0.675 1e-81
312376737 502 hypothetical protein AND_12339 [Anophele 0.964 0.430 0.680 2e-81
322798143 443 hypothetical protein SINV_05419 [Solenop 0.977 0.494 0.653 2e-81
91093669 437 PREDICTED: similar to AGAP012146-PA [Tri 0.924 0.473 0.671 4e-81
332018659 457 Phosphatidylserine synthase 1 [Acromyrme 0.928 0.455 0.687 5e-81
48097552 477 PREDICTED: phosphatidylserine synthase 1 0.924 0.433 0.679 1e-80
350404599 477 PREDICTED: phosphatidylserine synthase 1 0.924 0.433 0.674 2e-80
383864703 476 PREDICTED: phosphatidylserine synthase 1 0.928 0.436 0.672 3e-80
>gi|307196029|gb|EFN77754.1| Phosphatidylserine synthase 1 [Harpegnathos saltator] Back     alignment and taxonomy information
 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 145/222 (65%), Positives = 178/222 (80%), Gaps = 3/222 (1%)

Query: 1   IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKA 60
           IAFAHLLPNF+ECWWDALILD+L+CNG+GIWVGLK+C   EMREY+WVSI+DI ST+GK 
Sbjct: 224 IAFAHLLPNFVECWWDALILDVLVCNGLGIWVGLKICSILEMREYRWVSIRDIESTTGKL 283

Query: 61  KAGHASPVQPPQSWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSH 120
           K   A     P SWT VRWLDPTCT+MR+   + ++V+FWQ+SELNTFFLKH++E PPSH
Sbjct: 284 K--RAMLQFTPGSWTSVRWLDPTCTHMRLV-ALCQLVIFWQVSELNTFFLKHVYEFPPSH 340

Query: 121 PIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFG 180
           P V+ RL  +G++VAPS RQYY +VTD+ C R+GTQCW+YGAI +TEALLCI++G  LF 
Sbjct: 341 PFVVARLVLIGVIVAPSVRQYYMYVTDSTCSRVGTQCWVYGAIMVTEALLCIRHGAALFE 400

Query: 181 RTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVSLSDDIKR 222
           RTQA+NIL WL    L++VLCVYGCVLWH+Y+       IKR
Sbjct: 401 RTQALNILLWLLCQSLVSVLCVYGCVLWHQYLETGKKTTIKR 442




Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189785|gb|EFN74058.1| Phosphatidylserine synthase 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|158300473|ref|XP_320381.3| AGAP012146-PA [Anopheles gambiae str. PEST] gi|157013176|gb|EAA00195.4| AGAP012146-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|312376737|gb|EFR23739.1| hypothetical protein AND_12339 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|322798143|gb|EFZ19972.1| hypothetical protein SINV_05419 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|91093669|ref|XP_969370.1| PREDICTED: similar to AGAP012146-PA [Tribolium castaneum] gi|270008072|gb|EFA04520.1| hypothetical protein TcasGA2_TC016315 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332018659|gb|EGI59231.1| Phosphatidylserine synthase 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|48097552|ref|XP_393811.1| PREDICTED: phosphatidylserine synthase 1-like [Apis mellifera] Back     alignment and taxonomy information
>gi|350404599|ref|XP_003487158.1| PREDICTED: phosphatidylserine synthase 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|383864703|ref|XP_003707817.1| PREDICTED: phosphatidylserine synthase 1-like [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query224
FB|FBgn0037010498 CG4825 [Drosophila melanogaste 0.924 0.415 0.642 7.3e-75
ZFIN|ZDB-GENE-081031-18464 si:ch211-153f2.6 "si:ch211-153 0.906 0.437 0.570 3.7e-64
ZFIN|ZDB-GENE-040426-837465 ptdss1 "phosphatidylserine syn 0.906 0.436 0.545 4.8e-62
UNIPROTKB|Q5ZM65473 PTDSS1 "Phosphatidylserine syn 0.955 0.452 0.518 1.6e-61
RGD|1308949473 Ptdss1 "phosphatidylserine syn 0.906 0.429 0.531 5.5e-61
UNIPROTKB|Q00576471 PTDSS1 "Phosphatidylserine syn 0.906 0.430 0.531 7.1e-61
MGI|MGI:1276575473 Ptdss1 "phosphatidylserine syn 0.906 0.429 0.531 9e-61
UNIPROTKB|Q2KHY9473 PTDSS1 "Phosphatidylserine syn 0.906 0.429 0.531 1.2e-60
UNIPROTKB|F1PL07473 PTDSS1 "Uncharacterized protei 0.906 0.429 0.531 1.2e-60
UNIPROTKB|P48651473 PTDSS1 "Phosphatidylserine syn 0.906 0.429 0.526 2.4e-60
FB|FBgn0037010 CG4825 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
 Identities = 135/210 (64%), Positives = 168/210 (80%)

Query:     1 IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKA 60
             I FAHLLPNFIECWWDALILD+++CNG+GIW+GLK+C+  EMREYKW SIKDI +T+GK 
Sbjct:   254 ITFAHLLPNFIECWWDALILDVIICNGLGIWMGLKICQILEMREYKWASIKDISTTTGKI 313

Query:    61 KAGHASPVQPPQSWTHVRWLDPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSH 120
             K   A     P+SW+ +RWLDP  T MR    V ++V+FWQ++ELNTFFLKHIFEMPP H
Sbjct:   314 K--RAMLQFTPESWSAIRWLDPKSTAMRFA-AVIQLVIFWQVTELNTFFLKHIFEMPPDH 370

Query:   121 PIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGKLLFG 180
              IVI RL F+G+ VAPS RQYY +VTDT+CKR+GTQCW+YGAI ++EA+LCIKNGK LF 
Sbjct:   371 FIVIGRLIFIGLFVAPSVRQYYVYVTDTRCKRVGTQCWVYGAIMVSEAILCIKNGKELFE 430

Query:   181 RTQAVNILAWLSVMFLLAVLCVYGCVLWHR 210
             RTQA+NI+ WL+V  +++V  VY  V W +
Sbjct:   431 RTQAINIVLWLTVQVIISVAFVYLAVYWQQ 460




GO:0003882 "CDP-diacylglycerol-serine O-phosphatidyltransferase activity" evidence=ISS
GO:0006659 "phosphatidylserine biosynthetic process" evidence=IEA
GO:0022008 "neurogenesis" evidence=IMP
ZFIN|ZDB-GENE-081031-18 si:ch211-153f2.6 "si:ch211-153f2.6" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-837 ptdss1 "phosphatidylserine synthase 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZM65 PTDSS1 "Phosphatidylserine synthase 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1308949 Ptdss1 "phosphatidylserine synthase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q00576 PTDSS1 "Phosphatidylserine synthase 1" [Cricetulus griseus (taxid:10029)] Back     alignment and assigned GO terms
MGI|MGI:1276575 Ptdss1 "phosphatidylserine synthase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KHY9 PTDSS1 "Phosphatidylserine synthase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PL07 PTDSS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P48651 PTDSS1 "Phosphatidylserine synthase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B1H3H9PTSS1_XENTR2, ., 7, ., 8, ., 2, 90.52150.91960.4430yesN/A
Q2KHY9PTSS1_BOVIN2, ., 7, ., 8, ., 2, 90.50900.95530.4524yesN/A
P48651PTSS1_HUMAN2, ., 7, ., 8, ., 2, 90.50450.95530.4524yesN/A
Q5ZM65PTSS1_CHICK2, ., 7, ., 8, ., 2, 90.51800.95530.4524yesN/A
Q5PQL5PTSS1_RAT2, ., 7, ., 8, ., 2, 90.50900.95530.4524yesN/A
Q00576PTSS1_CRIGR2, ., 7, ., 8, ., 2, 90.50900.95530.4543yesN/A
Q99LH2PTSS1_MOUSE2, ., 7, ., 8, ., 2, 90.50900.95530.4524yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.8LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query224
pfam03034278 pfam03034, PSS, Phosphatidyl serine synthase 4e-71
PLN02930353 PLN02930, PLN02930, CDP-diacylglycerol-serine O-ph 5e-40
>gnl|CDD|145924 pfam03034, PSS, Phosphatidyl serine synthase Back     alignment and domain information
 Score =  217 bits (556), Expect = 4e-71
 Identities = 88/177 (49%), Positives = 114/177 (64%), Gaps = 6/177 (3%)

Query: 1   IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKA 60
           I F HLLPNF ECWWD +ILD+L+CNG+GIW+G+K C+   M+EY WV +KDI S  GK 
Sbjct: 106 ITFRHLLPNFNECWWDHIILDVLICNGLGIWLGMKTCRLLRMKEYHWVGLKDIPSYRGKL 165

Query: 61  KAGHASPVQPPQSWTHVRWLDPTCTYMRIHWC-VPKMVLFWQLSELNTFFLKHIFEMPPS 119
           K         P SW    W        R  +  V  +V    L+ELNTFFLKHI  +PPS
Sbjct: 166 K--RVLLQFTPASWDKYEWKVFKS-PKR--FLQVLFLVFLILLAELNTFFLKHILWIPPS 220

Query: 120 HPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIYGAIQLTEALLCIKNGK 176
           HP+V+ RL   G++ AP+ R+YY ++TD + KRLGTQ W+  AI  TEAL+C+K G+
Sbjct: 221 HPLVLYRLILWGLISAPAIREYYVYITDPRTKRLGTQAWVAIAILFTEALICVKFGQ 277


Phosphatidyl serine synthase is also known as serine exchange enzyme. This family represents eukaryotic PSS I and II which are membrane bound proteins which catalyzes the replacement of the head group of a phospholipid (phosphotidylcholine or phosphotidylethanolamine) by L-serine. Length = 278

>gnl|CDD|178518 PLN02930, PLN02930, CDP-diacylglycerol-serine O-phosphatidyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 224
KOG2735|consensus466 100.0
PF03034280 PSS: Phosphatidyl serine synthase; InterPro: IPR00 100.0
PLN02930353 CDP-diacylglycerol-serine O-phosphatidyltransferas 100.0
>KOG2735|consensus Back     alignment and domain information
Probab=100.00  E-value=1.6e-88  Score=629.47  Aligned_cols=211  Identities=47%  Similarity=1.006  Sum_probs=207.4

Q ss_pred             CcccccCCCCccchhhHHHHHHHhhhhHHHHHHHHhhhhccceeeeeeeecccCCCcccccccCCCCCCCCCCcceeecC
Q psy15747          1 IAFAHLLPNFIECWWDALILDILLCNGIGIWVGLKLCKWFEMREYKWVSIKDIHSTSGKAKAGHASPVQPPQSWTHVRWL   80 (224)
Q Consensus         1 itfqH~LPNF~ECWWDh~iLDVLiCN~lGI~lGm~~~~~l~~k~Y~W~g~~~i~s~~gK~kr~~~~~QFtP~sw~~~~W~   80 (224)
                      ++|+|+||||+||||||+|||||+|||+|||+||++||+|+||+|+|.|++||||++||+||  ++.||||+||+++||.
T Consensus       223 ~~f~hlLPNFaECWWD~iILDVLiCNglGI~~Gmk~c~~L~mrty~W~sik~i~t~~GK~KR--~~lQFTPasW~~~~W~  300 (466)
T KOG2735|consen  223 LTFRHLLPNFAECWWDSIILDVLICNGLGIWAGMKTCRWLSMRTYHWESIKNIPTTRGKMKR--AALQFTPASWSKFEWH  300 (466)
T ss_pred             HHHHHHCccHHHHHHHHHHHHheecccchhhhHhHHHhhhcccceeeeeeccCcccchhHHH--HhhccCcccccccccc
Confidence            58999999999999999999999999999999999999999999999999999999999999  9999999999999995


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHhhhhhHHHhHhhccCCCCchHHHHHHHHHHhhhhHHHHHHHhhcCCCccccchhHHHH
Q psy15747         81 DPTCTYMRIHWCVPKMVLFWQLSELNTFFLKHIFEMPPSHPIVIIRLSFLGIMVAPSARQYYSFVTDTQCKRLGTQCWIY  160 (224)
Q Consensus        81 ~~~ss~~R~l~~v~~l~~~~~l~ELN~FFLK~~Lwipp~h~l~~~RL~l~~l~~~pa~rEyY~yitd~~~krlG~~~Wl~  160 (224)
                       |.||++|++ +|+.++++||++|||||||||+|||||+||++++||++++++++|++||||.|+||+.|||+|+|||++
T Consensus       301 -p~ss~~R~~-~V~~lviiwlltELNTFFlKhvf~ipp~Hpvv~~RlIli~~i~aptiRqyy~y~tD~~~KrvG~qcWv~  378 (466)
T KOG2735|consen  301 -PASSLRRFA-AVYTLVIIWLLTELNTFFLKHVFWIPPKHPVVLWRLILIALIAAPTIRQYYVYLTDKPCKRVGMQCWVF  378 (466)
T ss_pred             -cchHHHHHH-HHHHHHHHHHHHHHHHHHHheeEecCCCCceeehhHHHHHhhccchHHHHHHHccCchhhhcchhHHHH
Confidence             999999999 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhHhhhCCCccCCccchhhhHHHHHHHHHHHHHhhhhheeeehhccC
Q psy15747        161 GAIQLTEALLCIKNGKLLFGRTQAVNILAWLSVMFLLAVLCVYGCVLWHRYVSVS  215 (224)
Q Consensus       161 ~ai~~~E~li~iKfg~~~f~~~~~~~iv~W~~~~~~~s~~~v~~~~~~~~~~~~~  215 (224)
                      +||+++|++||||||+++|+.|++.+|+.|+..+++.++.|+|.+++|+++-+++
T Consensus       379 ~aI~~~El~IciKfg~~~f~~t~~~~Ivlw~l~~v~~t~~~v~~~v~~~~~~~t~  433 (466)
T KOG2735|consen  379 LAICALELLICIKFGSHMFIKTQINYIVLWLLMGVIGTFTCVLLAVWWAERKGTT  433 (466)
T ss_pred             HHHHHHHhhhheeeCCceeeecchhHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999999999999999999999999999999998655



>PF03034 PSS: Phosphatidyl serine synthase; InterPro: IPR004277 Phosphatidyl serine synthase is also known as serine exchange enzyme (2 Back     alignment and domain information
>PLN02930 CDP-diacylglycerol-serine O-phosphatidyltransferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00