Psyllid ID: psy15803
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1045 | 2.2.26 [Sep-21-2011] | |||||||
| Q9NTI2 | 1148 | Probable phospholipid-tra | yes | N/A | 0.439 | 0.399 | 0.530 | 1e-143 | |
| P98200 | 1148 | Probable phospholipid-tra | yes | N/A | 0.415 | 0.378 | 0.543 | 1e-141 | |
| Q29449 | 1149 | Probable phospholipid-tra | yes | N/A | 0.422 | 0.384 | 0.556 | 1e-141 | |
| Q9Y2Q0 | 1164 | Probable phospholipid-tra | no | N/A | 0.422 | 0.379 | 0.544 | 1e-140 | |
| P70704 | 1149 | Probable phospholipid-tra | no | N/A | 0.420 | 0.382 | 0.548 | 1e-140 | |
| O94296 | 1258 | Probable phospholipid-tra | yes | N/A | 0.424 | 0.352 | 0.457 | 1e-113 | |
| P39524 | 1355 | Probable phospholipid-tra | yes | N/A | 0.428 | 0.330 | 0.433 | 1e-109 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | yes | N/A | 0.446 | 0.384 | 0.405 | 1e-97 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | N/A | 0.484 | 0.407 | 0.372 | 2e-93 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | N/A | 0.472 | 0.410 | 0.380 | 3e-92 |
| >sp|Q9NTI2|AT8A2_HUMAN Probable phospholipid-transporting ATPase IB OS=Homo sapiens GN=ATP8A2 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/488 (53%), Positives = 332/488 (68%), Gaps = 29/488 (5%)
Query: 40 KADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPD 99
+A R I +N P KF N+ISTAKYS++TF P FL+EQ RR +N FFLFIALLQQIPD
Sbjct: 12 EAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPD 71
Query: 100 VSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLK 159
VSPTGRYTTL+PLI+I+ ++GIKEI+ED KRH AD +N + V+RNGM + WK++
Sbjct: 72 VSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVA 131
Query: 160 VGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSL 219
VGDIVKV N + P D+++LS+SE + MCY+ET NLDGETNLK+RQ + T+ + L
Sbjct: 132 VGDIVKVVNGQYLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQTREVL 191
Query: 220 AQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGP 279
+L G IEC+ PNR +YDFTGN G++ V LGP++ILLRG+ LRNT W+ GIVVYTG
Sbjct: 192 MKLSGTIECEGPNRHLYDFTGNLNLDGKSLVALGPDQILLRGTQLRNTQWVFGIVVYTGH 251
Query: 280 DSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLS 339
D+KLM+N+T APLKRS V+K+TN Q ++LF +LL + +S+A + W +WY+
Sbjct: 252 DTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSAGALYWNRSHGEKNWYIKK 311
Query: 340 RNPS---FHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR 396
+ + F NLLTFIILYNNLIPISL VTLE+V++ QA FIN D DMYY DTPA AR
Sbjct: 312 MDTTSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYIGNDTPAMAR 371
Query: 397 TSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPS 456
TSNLNEELG VK++FSDKTGTLT N+M FK CS+AG + +F +AR PS
Sbjct: 372 TSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAG-VTYGHFPE---------LAREPS 421
Query: 457 IEPVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQSRMIARNPSIEPVVREFLTMLA 516
+ +F M C C L+ N R+P+ P ++EFLT+LA
Sbjct: 422 SD----DFCRMPPPCSDSCDFDDPRLLKNIED-----------RHPT-APCIQEFLTLLA 465
Query: 517 VCHTVYIE 524
VCHTV E
Sbjct: 466 VCHTVVPE 473
|
Homo sapiens (taxid: 9606) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|P98200|AT8A2_MOUSE Probable phospholipid-transporting ATPase IB OS=Mus musculus GN=Atp8a2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/460 (54%), Positives = 322/460 (70%), Gaps = 26/460 (5%)
Query: 40 KADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPD 99
+A R+I +N KF N+ISTAKYS++TF P FL+EQ RR +N FFLFIALLQQIPD
Sbjct: 12 EAPARIIYLNQSHLNKFCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPD 71
Query: 100 VSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLK 159
VSPTGRYTTL+PL++I+ ++GIKEIIED KRH AD +N + V+RNGM + WK++
Sbjct: 72 VSPTGRYTTLVPLVIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVA 131
Query: 160 VGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSL 219
VGDIVKV N + P D+++ S+SE +GMCY+ET NLDGETNLK+RQ + T+ + L
Sbjct: 132 VGDIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTTDMQTRDVL 191
Query: 220 AQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGP 279
+L G+IEC+ PNR +YDFTGN G+++V LGP++ILLRG+ LRNT W+ G+VVYTG
Sbjct: 192 MKLSGRIECEGPNRHLYDFTGNLHLDGKSSVALGPDQILLRGTQLRNTQWVFGVVVYTGH 251
Query: 280 DSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLL- 338
DSKLM+N+T APLKRS V+K+TN Q ++LF +LL + +S+ + W WY+
Sbjct: 252 DSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGSHGGKSWYIKK 311
Query: 339 --SRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR 396
+ + +F NLLTFIILYNNLIPISL VTLE+V++ QA FIN DMDMYY DTPA AR
Sbjct: 312 MDTNSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDMDMYYIENDTPAMAR 371
Query: 397 TSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPS 456
TSNLNEELG VK++FSDKTGTLT N+M FK CS+AG + +F ++ S R S
Sbjct: 372 TSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAG-VTYGHFPELAREQSSDDFCRMTS 430
Query: 457 ----------------IE------PVVREFLTMLAVCHTV 474
IE P ++EFLT+LAVCHTV
Sbjct: 431 CTNDSCDFNDPRLLKNIEDQHPTAPCIQEFLTLLAVCHTV 470
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q29449|AT8A1_BOVIN Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/453 (55%), Positives = 315/453 (69%), Gaps = 11/453 (2%)
Query: 32 DTVDCITGKADH---RVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFF 88
D V T AD R I IN PQ KF N +STAKY+++TF P FL+ QFRR +N FF
Sbjct: 22 DDVSEKTSLADQEEIRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFF 81
Query: 89 LFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNG 148
LFIALLQQIPDVSPTGRYTTL+PL+ I+ V+ IKEIIEDIKRH AD +N + V+RNG
Sbjct: 82 LFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNG 141
Query: 149 MIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208
+ W+ + VGDIV + + P D ++LS+SE + MCYIET NLDGETNLK+RQ
Sbjct: 142 AWEIVHWEKVNVGDIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLP 201
Query: 209 ETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTA 268
TS + D SL +L G+IEC+ PNR +YDF GN + GR+ VPLG ++ILLRG+ LRNT
Sbjct: 202 ATSDIKDIDSLMRLSGRIECESPNRHLYDFVGNIRLDGRSTVPLGADQILLRGAQLRNTQ 261
Query: 269 WIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTL 328
W+ GIVVYTG D+KLM+N+TS PLK S V++ITN Q ++LF +L+A+ + + S IW
Sbjct: 262 WVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNR 321
Query: 329 GRNAGDWYL---LSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMY 385
+ DWYL +F N LTFIIL+NNLIPISL VTLE+V+F QA FIN D+DM+
Sbjct: 322 RHSGRDWYLNLNYGGANNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMH 381
Query: 386 YEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPN--FNSNN 443
YEPTDT A ARTSNLN ELG VK++FSDKTGTLT NVM+FK C++AG N F
Sbjct: 382 YEPTDTAAMARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEK 441
Query: 444 VQEQSRM---IARNPSIEPVVREFLTMLAVCHT 473
S + + N P++ EFLTM+AVCHT
Sbjct: 442 TFSDSSLLENLQNNHPTAPIICEFLTMMAVCHT 474
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9Y2Q0|AT8A1_HUMAN Probable phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 500 bits (1288), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/468 (54%), Positives = 316/468 (67%), Gaps = 26/468 (5%)
Query: 32 DTVDCITGKADH---RVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFF 88
D V T AD R I IN PQ KF N +STAKY+++TF P FL+ QFRR +N FF
Sbjct: 22 DDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFF 81
Query: 89 LFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNG 148
LFIALLQQIPDVSPTGRYTTL+PL+ I+ V+ IKEIIEDIKRH AD +N + V+RNG
Sbjct: 82 LFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNG 141
Query: 149 MIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208
+ W+ + VG+IVKV N P DL+ LS+SE + MCYIET NLDGETNLK+RQ
Sbjct: 142 AWEIVHWEKVAVGEIVKVTNGEHLPADLISLSSSEPQAMCYIETSNLDGETNLKIRQGLP 201
Query: 209 ETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTA 268
TS + D SL ++ G+IEC+ PNR +YDF GN + G VPLG ++ILLRG+ LRNT
Sbjct: 202 ATSDIKDVDSLMRISGRIECESPNRHLYDFVGNIRLDGHGTVPLGADQILLRGAQLRNTQ 261
Query: 269 WIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTL 328
W+ GIVVYTG D+KLM+N+TS PLK S V++ITN Q ++LF +L+A+ + + S IW
Sbjct: 262 WVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNR 321
Query: 329 GRNAGDWYL---LSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMY 385
+ DWYL +F N LTFIIL+NNLIPISL VTLE+V+F QA FIN D+DM+
Sbjct: 322 RHSGKDWYLNLNYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMH 381
Query: 386 YEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNIL--VP------ 437
YEPTDT A ARTSNLNEELG VK++FSDKTGTLT NVM+FK C++AG VP
Sbjct: 382 YEPTDTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGHVPEPEDYG 441
Query: 438 ---------NFNSNNVQEQSRM---IARNPSIEPVVREFLTMLAVCHT 473
F S + + N P++ EFLTM+AVCHT
Sbjct: 442 CSPDEWQNSQFGDEKTFSDSSLLENLQNNHPTAPIICEFLTMMAVCHT 489
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P70704|AT8A1_MOUSE Probable phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/456 (54%), Positives = 315/456 (69%), Gaps = 17/456 (3%)
Query: 32 DTVDCITGKADH---RVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFF 88
D V T AD R I IN PQ KF N +STAKY+++TF P FL+ QFRR +N FF
Sbjct: 22 DDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNVITFLPRFLYSQFRRAANSFF 81
Query: 89 LFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNG 148
LFIALLQQIPDVSPTGRYTTL+PL+ I+ V+ IKEIIEDIKRH AD +N + V+RNG
Sbjct: 82 LFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNG 141
Query: 149 MIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208
+ W+ + VGDIV + + P D ++LS+SE + MCYIET NLDGETNLK+RQ
Sbjct: 142 AWEIVHWEKVNVGDIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLP 201
Query: 209 ETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTA 268
TS + D SL ++ G+IEC+ PNR +YDF GN + G VPLG ++ILLRG+ LRNT
Sbjct: 202 ATSDIKDIDSLMRISGRIECESPNRHLYDFVGNIRLDGHGTVPLGADQILLRGAQLRNTQ 261
Query: 269 WIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTL 328
W+ GIVVYTG D+KLM+N+TS PLK S V++ITN Q ++LF +L+A+ + + S IW
Sbjct: 262 WVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNR 321
Query: 329 GRNAGDWYL---LSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMY 385
+ DWYL +F N LTFIIL+NNLIPISL VTLE+V+F QA FIN D+DM+
Sbjct: 322 RHSGKDWYLHLHYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMH 381
Query: 386 YEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQ 445
YEPTDT A ARTSNLNEELG VK++FSDKTGTLT NVM+FK C++AG V S+
Sbjct: 382 YEPTDTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAG---VAYGQSSQFG 438
Query: 446 EQSRM--------IARNPSIEPVVREFLTMLAVCHT 473
++ + N P++ EFLTM+AVCHT
Sbjct: 439 DEKTFNDPSLLDNLQNNHPTAPIICEFLTMMAVCHT 474
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|O94296|YOOC_SCHPO Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/472 (45%), Positives = 310/472 (65%), Gaps = 28/472 (5%)
Query: 44 RVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPT 103
R I +N + F+ N +ST KYS TF P FL EQF +Y+N+FFLF A++QQIP ++P
Sbjct: 145 RQIILNDYSANHFLHNAVSTCKYSAFTFLPKFLKEQFSKYANLFFLFTAVVQQIPGITPV 204
Query: 104 GRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDI 163
RYTT+ P+++++ VSGIKEI+EDIKR D E+N V++ +QWKD+ VGDI
Sbjct: 205 NRYTTIGPMLIVLSVSGIKEIMEDIKRKKQDQELNESPCYVLQGTGFVEKQWKDVVVGDI 264
Query: 164 VKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLK 223
VK+ + +FFP DL++LS+SE EG+CYIET NLDGETNLK++QA ET+ L P L QL
Sbjct: 265 VKIVSETFFPADLVLLSSSEPEGLCYIETANLDGETNLKIKQALPETAGLLKPVELGQLS 324
Query: 224 GQIECDHPNRFIYDFTGNFK-ERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSK 282
G+++ + PN +Y F K +PL P+++LLRG+ LRNT W+ GIVV+TG +SK
Sbjct: 325 GEVKSEQPNNNLYTFDATLKLLPSDRELPLSPDQLLLRGAQLRNTPWVYGIVVFTGHESK 384
Query: 283 LMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIW-TLGRNAGDW--YLLS 339
LMKN T P+KR++V+K N+Q + L + + LCF S+ + I ++ +A + Y +
Sbjct: 385 LMKNTTETPIKRTSVEKQVNSQILFLLCIFVFLCFASSLGALIHRSVYGSALSYVKYTSN 444
Query: 340 RNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSN 399
R F LLTF ILY+NL+PISL VT E+VR+IQA I++D+DMY E TDTPAA RTS+
Sbjct: 445 RAGMFFKGLLTFWILYSNLVPISLFVTFELVRYIQAQLISSDLDMYNEETDTPAACRTSS 504
Query: 400 LNEELGMVKFVFSDKTGTLTRNVMEFKICSVAG---NILVP---NFNSNNVQEQSRMIA- 452
L EELG V ++FSDKTGTLTRN MEF+ C++AG ++P F S ++ +
Sbjct: 505 LVEELGQVGYIFSDKTGTLTRNQMEFRQCTIAGVAYADVIPEDRQFTSEDLDSDMYIYDF 564
Query: 453 -------RNPSIEPVVREFLTMLAVCHTVCSVAGNILVPNFN--SNNVKEQS 495
++ ++ +FL +L++CHTV +P ++ +N++K Q+
Sbjct: 565 DTLKENLKHSENASLIHQFLLVLSICHTV--------IPEYDESTNSIKYQA 608
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P39524|ATC3_YEAST Probable phospholipid-transporting ATPase DRS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DRS2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/482 (43%), Positives = 316/482 (65%), Gaps = 34/482 (7%)
Query: 39 GKADHRVININ---APQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQ 95
G + RVI+IN A S + N IST KY+ TF P FLF++F +Y+N+FFL + +Q
Sbjct: 178 GNGEPRVIHINDSLANSSFGYSDNHISTTKYNFATFLPKFLFQEFSKYANLFFLCTSAIQ 237
Query: 96 QIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMI-YVEQ 154
Q+P VSPT RYTT+ L+++++VS +KE IEDIKR +D E+N+ + ++ +VE+
Sbjct: 238 QVPHVSPTNRYTTIGTLLVVLIVSAMKECIEDIKRANSDKELNNSTAEIFSEAHDDFVEK 297
Query: 155 -WKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSL 213
W D++VGDI++V + P D ++LS+SE EG+CYIET NLDGETNLK++Q+ ET+
Sbjct: 298 RWIDIRVGDIIRVKSEEPIPADTIILSSSEPEGLCYIETANLDGETNLKIKQSRVETAKF 357
Query: 214 TDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGI 273
D +L + G++ + PN +Y + G R +PL P++++LRG+ LRNTAWI G+
Sbjct: 358 IDVKTLKNMNGKVVSEQPNSSLYTYEGTMTLNDR-QIPLSPDQMILRGATLRNTAWIFGL 416
Query: 274 VVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLG--RN 331
V++TG ++KL++NAT+ P+KR+ V+KI N Q I LF +L+ L IS+ + I + ++
Sbjct: 417 VIFTGHETKLLRNATATPIKRTAVEKIINRQIIALFTVLIVLILISSIGNVIMSTADAKH 476
Query: 332 AGDWYLLSRNPS--FHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPT 389
YL N + F + LTF IL++NL+PISL VT+E++++ QA I +D+D+YYE T
Sbjct: 477 LSYLYLEGTNKAGLFFKDFLTFWILFSNLVPISLFVTVELIKYYQAFMIGSDLDLYYEKT 536
Query: 390 DTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNIL---VPNFNSNNVQE 446
DTP RTS+L EELG ++++FSDKTGTLTRN+MEFK CS+AG+ +P + V++
Sbjct: 537 DTPTVVRTSSLVEELGQIEYIFSDKTGTLTRNIMEFKSCSIAGHCYIDKIPEDKTATVED 596
Query: 447 QSRMIAR----------NPSIE--PVVREFLTMLAVCHTVCSVAGNILVPNFNSN-NVKE 493
+ R +PS E P++ +FLT+LA CHTV +P F S+ ++K
Sbjct: 597 GIEVGYRKFDDLKKKLNDPSDEDSPIINDFLTLLATCHTV--------IPEFQSDGSIKY 648
Query: 494 QS 495
Q+
Sbjct: 649 QA 650
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids (Potential). Seems to be involved in ribosome assembly. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 358 bits (919), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/503 (40%), Positives = 301/503 (59%), Gaps = 36/503 (7%)
Query: 29 PTIDTVDCITGKADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFF 88
PT TV C +++ Q +F GN IST KY++ TF P LFEQFRR +NI+F
Sbjct: 33 PTYRTVYCNDRESN---------QPVRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYF 83
Query: 89 LFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNG 148
L I+ L P +SP T + PL ++++VS IKE ED KR D IN+ +V+++++
Sbjct: 84 LGISCLSMTP-ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEILQDQ 142
Query: 149 MIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208
W+ L+VGDIVK+ + FFP D++ +S++ ++G+CY+ET NLDGETNLK+R+A
Sbjct: 143 QWVSIPWRKLQVGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALE 202
Query: 209 ETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTA 268
T P + KG+I+C+ PN +Y FTGN + +T +PL P+++LLRG LRNT
Sbjct: 203 RTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQT-LPLSPDQLLLRGCSLRNTE 261
Query: 269 WIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWT- 327
+I+G VV+TG ++K+M NA +AP KRST++K + I +F +L+ +C I A +I T
Sbjct: 262 YIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTD 321
Query: 328 -----LGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQAT-FINND 381
LG + DW + T + L++++IPISL V++E+++FIQ+T FIN D
Sbjct: 322 REDKYLGLHNSDWEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFINRD 381
Query: 382 MDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNS 441
++MY+ T+TPA+ARTSNLNEELG V+++FSDKTGTLTRN+MEF CS+ G
Sbjct: 382 LNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSY-----G 436
Query: 442 NNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQSRMIARN 501
V E + IA+ ++ + T G I FN ++ + R RN
Sbjct: 437 CGVTEIEKGIAQRHGLKVQEEQRST------------GAIREKGFNFDDPRLM-RGAWRN 483
Query: 502 PSIEPVVREFLTMLAVCHTVYIE 524
+ +E LA+CHTV E
Sbjct: 484 EPNPDLCKELFRCLAICHTVLPE 506
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 205/551 (37%), Positives = 307/551 (55%), Gaps = 45/551 (8%)
Query: 37 ITGKADHRVININAP-----QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFI 91
I G R+++ N P + ++ N +ST +Y+L+TF P L+EQF R +N +FL
Sbjct: 34 INGPGYTRIVHCNQPHLHLAKVLRYTSNYVSTTRYNLITFLPKCLYEQFHRVANFYFLVA 93
Query: 92 ALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIR-NGMI 150
A+L P +SP +++ + PLI ++ +S KE +ED +R + D ++N R V R +G
Sbjct: 94 AILSVFP-LSPFNKWSMIAPLIFVVGLSMGKEALEDWRRFMQDVKVNSRKATVHRGDGDF 152
Query: 151 YVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNET 210
+WK L+VGD+VKV + FFP DL++LS+S +G+CY+ETMNLDGETNLKV++ + T
Sbjct: 153 GRRKWKKLRVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRCLDVT 212
Query: 211 SSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWI 270
L + G I+C+ PN +Y F GN + G+ PL P +ILLR S LRNT+++
Sbjct: 213 LPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQV-YPLDPSQILLRDSKLRNTSYV 271
Query: 271 IGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGR 330
G+VV+TG D+K+M+N+T +P KRS ++K + LF LL+ + FIS+ + T
Sbjct: 272 YGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLVLVSFISSLGFAVMT-KM 330
Query: 331 NAGDWYLLS----------RNPSFHS---NLLTFIILYNNLIPISLQVTLEIVRFIQATF 377
+ GDW+ L RNP FH+ +L+T ++LY LIPISL V++E+V+ +QATF
Sbjct: 331 HMGDWWYLRPDKPERLTNPRNP-FHAWVVHLITAVLLYGYLIPISLYVSIELVKVLQATF 389
Query: 378 INNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGN---- 433
IN D+ MY + TPA ARTSNLNEELG V + SDKTGTLT N M+F CS+AG
Sbjct: 390 INQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGV 449
Query: 434 -------ILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAGNILVPN- 485
+ +EQ + P + + M + + + I +
Sbjct: 450 RASEVELAAAKQMAIDLDEEQGEEVTHLPRTRGRMHGYAKMPSKTSSDIELETVITATDE 509
Query: 486 ---FNSNNVK----EQSRMIARNPSIEPVVRE---FLTMLAVCHTVYIELKHRTALASLL 535
S +K E R++ N EP + FL +LAVCHT E+ T +
Sbjct: 510 GDQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYE 569
Query: 536 GTTNNNYALII 546
+ + A ++
Sbjct: 570 AESPDEVAFLV 580
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 340 bits (873), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 203/534 (38%), Positives = 296/534 (55%), Gaps = 40/534 (7%)
Query: 37 ITGKADHRVININAPQSC-----KFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFI 91
I G RV+ N P S + GN + + KY++ +FFP LFEQFRR +N +FL
Sbjct: 33 IGGPGFSRVVYCNEPGSPAAERRNYAGNYVRSTKYTVASFFPKSLFEQFRRVANFYFLVT 92
Query: 92 ALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIR-NGMI 150
+L + D+SP G + L+PL L++ + +KE IED +R D E+N+R V V NG+
Sbjct: 93 GILS-LTDLSPYGAVSALLPLALVISATMVKEGIEDWRRKQQDIEVNNRKVKVHDGNGIF 151
Query: 151 YVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNET 210
E+W++L+VGDIV+V + FFP DL++LS+S + +CY+ETMNLDGETNLKV+Q T
Sbjct: 152 RQEEWRNLRVGDIVRVEKDEFFPADLLLLSSSYEDSVCYVETMNLDGETNLKVKQGLEAT 211
Query: 211 SSLTDPSS-LAQLKGQIECDHPNRFIYDFTGNFK-ERGRTAVPLGPERILLRGSMLRNTA 268
SSL + S +G + C+ PN +Y F G E R PL ++ILLR S LRNT
Sbjct: 212 SSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEER--FPLSIQQILLRDSKLRNTE 269
Query: 269 WIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISA-------- 320
++ G VV+TG D+K+++N+T P KRS +++ + ++F L+ + F+ +
Sbjct: 270 YVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLVFLMSFVGSIIFGVETR 329
Query: 321 ------AASTIWTLGRNAGDWYLLSRNPSFHS--NLLTFIILYNNLIPISLQVTLEIVRF 372
+ W L + D + + + T +LY+ IPISL V++EIV+
Sbjct: 330 EDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATMLYSYFIPISLYVSIEIVKV 389
Query: 373 IQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAG 432
+Q+ FIN D+ MYYE TD PA ARTSNLNEELGMV + SDKTGTLT N MEF CS+AG
Sbjct: 390 LQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAG 449
Query: 433 NILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVK 492
+ E R +A P+V E L ++ V + V G FN + +
Sbjct: 450 KAY-----GRGITEVERAMAVRSGGSPLVNEDLDVV-VDQSGPKVKG------FNFEDER 497
Query: 493 EQSRMIARNPSIEPVVREFLTMLAVCHTVYIELKHRTALASLLGTTNNNYALII 546
+ R P V+++F +LAVCHT E + S + + A ++
Sbjct: 498 VMNGNWVRQPE-AAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEAAFVV 550
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1045 | ||||||
| 27820152 | 994 | ML-1 protein [Homo sapiens] | 0.702 | 0.738 | 0.508 | 0.0 | |
| 157110175 | 1155 | phospholipid-transporting atpase 1 (amin | 0.410 | 0.371 | 0.621 | 1e-155 | |
| 157110177 | 1126 | phospholipid-transporting atpase 1 (amin | 0.410 | 0.380 | 0.621 | 1e-155 | |
| 194757653 | 1676 | GF11187 [Drosophila ananassae] gi|190622 | 0.441 | 0.275 | 0.572 | 1e-153 | |
| 195151381 | 1227 | GL10402 [Drosophila persimilis] gi|19411 | 0.414 | 0.352 | 0.599 | 1e-152 | |
| 195122372 | 1136 | GI18942 [Drosophila mojavensis] gi|19391 | 0.410 | 0.377 | 0.592 | 1e-151 | |
| 194883351 | 1358 | GG22494 [Drosophila erecta] gi|190658953 | 0.414 | 0.318 | 0.590 | 1e-150 | |
| 242004602 | 1200 | conserved hypothetical protein [Pediculu | 0.425 | 0.370 | 0.564 | 1e-150 | |
| 221330213 | 1176 | CG42321, isoform K [Drosophila melanogas | 0.414 | 0.368 | 0.590 | 1e-150 | |
| 195583058 | 1235 | GD25762 [Drosophila simulans] gi|1941933 | 0.414 | 0.350 | 0.592 | 1e-150 |
| >gi|27820152|gb|AAF40215.2| ML-1 protein [Homo sapiens] | Back alignment and taxonomy information |
|---|
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/808 (50%), Positives = 530/808 (65%), Gaps = 74/808 (9%)
Query: 40 KADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPD 99
+A R I +N P KF N+ISTAKYS++TF P FL+EQ RR +N FFLFIALLQQIPD
Sbjct: 12 EAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPD 71
Query: 100 VSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLK 159
VSPTGRYTTL+PLI+I+ ++GIKEI+ED KRH AD +N + V+RNGM + WK++
Sbjct: 72 VSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVA 131
Query: 160 VGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSL 219
VGDIVKV N + P D+++LS+SE + MCY+ET NLDGETNLK+RQ + T+ + L
Sbjct: 132 VGDIVKVVNGQYLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQTREVL 191
Query: 220 AQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGP 279
+L G IEC+ PNR +YDFTGN G++ V LGP++ILLRG+ LRNT W+ GIVVYTG
Sbjct: 192 MKLSGTIECEGPNRHLYDFTGNLNLDGKSLVALGPDQILLRGTQLRNTQWVFGIVVYTGH 251
Query: 280 DSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLS 339
D+KLM+N+T APLKRS V+K+TN Q ++LF +LL + +S+A + W +WY+
Sbjct: 252 DTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSAGALYWNRSHGEKNWYIKK 311
Query: 340 RNPS---FHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR 396
+ + F NLLTFIILYNNLIPISL VTLE+V++ QA FIN D DMYY DTPA AR
Sbjct: 312 MDTTSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYIGNDTPAMAR 371
Query: 397 TSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNP- 455
TSNLNEELG VK++FSDKTGTLT N+M FK CS+AG + +F + S R P
Sbjct: 372 TSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAG-VTYGHFPELAREPSSDDFCRMPP 430
Query: 456 ---------------SIE------PVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQ 494
+IE P ++EFLT+LAVCHTV VP + +N+ Q
Sbjct: 431 PCSDSCDFDDPRLLKNIEDRHPTAPCIQEFLTLLAVCHTV--------VPEKDGDNIIYQ 482
Query: 495 SR-----------------MIARNPS---IEPVVR--------EFLTMLAVCHTVYIEL- 525
+ AR P IE V F+ ++ V VY +
Sbjct: 483 ASSPDEAALVKGAKKLGFVFTARTPFSVIIEAVSNMRVHFRSPAFVKIVCVKWHVYCKYD 542
Query: 526 --------KHRTALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCR 577
+H T L +LLG N+ ALIIDG L YAL E+R+ FL+L L+C AVICCR
Sbjct: 543 QATRAAITQHCTDLGNLLG-KENDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCR 601
Query: 578 VSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIG 637
VSPLQK+E+V++V ++TLAIGDGANDV MIQ AHVGVGISG EG+QA SDY+I
Sbjct: 602 VSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIA 661
Query: 638 QFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGL 697
QF +L KLL VHG+W+YNR+ ILY FYKN+ LY++ELWFA +G+SGQ+LFERW IGL
Sbjct: 662 QFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGL 721
Query: 698 YNVLFTAFPPLAIGILDQVCSARTRLKYPILY--SQTANTFNVKIFWIWIGNALFHSMLM 755
YNV+FTA PP +GI ++ C+ + L++P LY +Q FN K+FW NAL HS+++
Sbjct: 722 YNVIFTALPPFTLGIFERSCTQESMLRFPQLYKITQNGEGFNTKVFWGHCINALVHSLIL 781
Query: 756 FWIPMLIYGQGTIWANGKDGGYLVLGNI 783
FW PM T++ +G YL +GNI
Sbjct: 782 FWFPMKALEHDTVFDSGHATDYLFVGNI 809
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|157110175|ref|XP_001650984.1| phospholipid-transporting atpase 1 (aminophospholipid flippase 1) [Aedes aegypti] gi|108883935|gb|EAT48160.1| AAEL000767-PB [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/439 (62%), Positives = 333/439 (75%), Gaps = 10/439 (2%)
Query: 42 DHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVS 101
D RVI +N Q K+ N ISTAKYS +TF P FLFEQFRRYSN FFLFIALLQQIPDVS
Sbjct: 56 DKRVILLNQSQRQKYCNNHISTAKYSAITFIPSFLFEQFRRYSNCFFLFIALLQQIPDVS 115
Query: 102 PTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVG 161
PTGRYTTL+PL+ I+ VS IKEI+EDIKRH AD EINHR ++ ++ G +WK+L VG
Sbjct: 116 PTGRYTTLVPLLFILSVSAIKEIVEDIKRHRADDEINHREIETLQGGQWRWIKWKELSVG 175
Query: 162 DIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQ 221
DIVKV NN+FFP DL+ LS+SE +G+ +IET NLDGETNLK+RQ + T+ + + Q
Sbjct: 176 DIVKVQNNTFFPADLVQLSSSEPQGISFIETSNLDGETNLKIRQGVSATAKILETKDFIQ 235
Query: 222 LKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDS 281
G +E + PNR +Y+F G KE G+ AV LGP+++LLRG+MLRNT+W+ GIV+YTG D+
Sbjct: 236 FSGTLESEPPNRHLYEFNGVLKESGKPAVALGPDQLLLRGAMLRNTSWVFGIVIYTGHDT 295
Query: 282 KLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWY----- 336
KLM+N+TSAPLKRSTVD++TNTQ +MLF +L+ LC +S + IWT DWY
Sbjct: 296 KLMRNSTSAPLKRSTVDRLTNTQILMLFFILIFLCIVSCICNQIWTKDHYKTDWYLGISD 355
Query: 337 LLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR 396
LLS+N F NLLTFIILYNNLIPISLQVTLE+VRF+QA FIN D+DMY+E +DTPA AR
Sbjct: 356 LLSKN--FAYNLLTFIILYNNLIPISLQVTLELVRFLQAIFINMDIDMYHEESDTPAMAR 413
Query: 397 TSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQ-SRMIARNP 455
TSNLNEELGMVK++FSDKTGTLTRNVMEFK CSVA I P N Q Q + I N
Sbjct: 414 TSNLNEELGMVKYIFSDKTGTLTRNVMEFKKCSVARTIYTP--EENPAQSQLVQHIMNNH 471
Query: 456 SIEPVVREFLTMLAVCHTV 474
++REFLT++A+CHTV
Sbjct: 472 HTAAILREFLTLMAICHTV 490
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157110177|ref|XP_001650985.1| phospholipid-transporting atpase 1 (aminophospholipid flippase 1) [Aedes aegypti] gi|108883936|gb|EAT48161.1| AAEL000767-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/439 (62%), Positives = 333/439 (75%), Gaps = 10/439 (2%)
Query: 42 DHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVS 101
D RVI +N Q K+ N ISTAKYS +TF P FLFEQFRRYSN FFLFIALLQQIPDVS
Sbjct: 56 DKRVILLNQSQRQKYCNNHISTAKYSAITFIPSFLFEQFRRYSNCFFLFIALLQQIPDVS 115
Query: 102 PTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVG 161
PTGRYTTL+PL+ I+ VS IKEI+EDIKRH AD EINHR ++ ++ G +WK+L VG
Sbjct: 116 PTGRYTTLVPLLFILSVSAIKEIVEDIKRHRADDEINHREIETLQGGQWRWIKWKELSVG 175
Query: 162 DIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQ 221
DIVKV NN+FFP DL+ LS+SE +G+ +IET NLDGETNLK+RQ + T+ + + Q
Sbjct: 176 DIVKVQNNTFFPADLVQLSSSEPQGISFIETSNLDGETNLKIRQGVSATAKILETKDFIQ 235
Query: 222 LKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDS 281
G +E + PNR +Y+F G KE G+ AV LGP+++LLRG+MLRNT+W+ GIV+YTG D+
Sbjct: 236 FSGTLESEPPNRHLYEFNGVLKESGKPAVALGPDQLLLRGAMLRNTSWVFGIVIYTGHDT 295
Query: 282 KLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWY----- 336
KLM+N+TSAPLKRSTVD++TNTQ +MLF +L+ LC +S + IWT DWY
Sbjct: 296 KLMRNSTSAPLKRSTVDRLTNTQILMLFFILIFLCIVSCICNQIWTKDHYKTDWYLGISD 355
Query: 337 LLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR 396
LLS+N F NLLTFIILYNNLIPISLQVTLE+VRF+QA FIN D+DMY+E +DTPA AR
Sbjct: 356 LLSKN--FAYNLLTFIILYNNLIPISLQVTLELVRFLQAIFINMDIDMYHEESDTPAMAR 413
Query: 397 TSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQ-SRMIARNP 455
TSNLNEELGMVK++FSDKTGTLTRNVMEFK CSVA I P N Q Q + I N
Sbjct: 414 TSNLNEELGMVKYIFSDKTGTLTRNVMEFKKCSVARTIYTP--EENPAQSQLVQHIMNNH 471
Query: 456 SIEPVVREFLTMLAVCHTV 474
++REFLT++A+CHTV
Sbjct: 472 HTAAILREFLTLMAICHTV 490
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194757653|ref|XP_001961077.1| GF11187 [Drosophila ananassae] gi|190622375|gb|EDV37899.1| GF11187 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/470 (57%), Positives = 347/470 (73%), Gaps = 9/470 (1%)
Query: 8 ESSRKLISGNPTSTGAGGGSQPTIDTVDCITGKADHRVININAPQSCKFVGNKISTAKYS 67
E +RK GNP + S D D RVIN+NAPQ+ K+ N+I+TAKYS
Sbjct: 437 EFARKYALGNPIAYDEDFTSSAGYDPDD-----GQKRVINLNAPQTTKYCNNRITTAKYS 491
Query: 68 LVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIED 127
++F P FLFEQFRRYSN FFL IA+LQQIP+VSPTGRYTTL+PL+ I+ VS IKEIIED
Sbjct: 492 FISFLPAFLFEQFRRYSNCFFLLIAMLQQIPEVSPTGRYTTLVPLMFILSVSAIKEIIED 551
Query: 128 IKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGM 187
IKRH AD EINHRS++ + +G +W +L VGDI+KV N+FFP DL++LS+SE + M
Sbjct: 552 IKRHRADNEINHRSIERLDSGAWITVRWSELTVGDIIKVTINTFFPADLILLSSSEPQAM 611
Query: 188 CYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGR 247
C+IET NLDGETNLK+RQ T+ L + L +L+G++EC+ PNR +Y+F G KE G+
Sbjct: 612 CFIETANLDGETNLKIRQGVTATAGLLETKDLLRLEGKVECELPNRHLYEFNGVLKETGK 671
Query: 248 TAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIM 307
V LG +++L RG+MLRNTAWI G+VVY+G ++KLMKN+TSAPLKRSTVDK+TNTQ +M
Sbjct: 672 PTVALGNDQVLQRGAMLRNTAWIFGVVVYSGQETKLMKNSTSAPLKRSTVDKLTNTQILM 731
Query: 308 LFVLLLALCFISAAASTIWTLGRNAGDWYL---LSRNPSFHSNLLTFIILYNNLIPISLQ 364
LF++L++LC S + WT + DWYL ++ S NLLTF ILYNNLIPISLQ
Sbjct: 732 LFMILISLCITSGLCNLFWTREHSDTDWYLGLNDFKSMSLGYNLLTFFILYNNLIPISLQ 791
Query: 365 VTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVME 424
VTLE+VRF+QA FIN D++MY++ ++TPA ARTSNLNEELGMVK++FSDKTGTLT+NVME
Sbjct: 792 VTLELVRFLQAIFINYDIEMYHQESNTPAMARTSNLNEELGMVKYIFSDKTGTLTQNVME 851
Query: 425 FKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTV 474
FK CS+AG+ VP +++R+P+ V+ EFL +L+VCHTV
Sbjct: 852 FKKCSIAGHSYVPKRTPEESLVVQNILSRHPTAA-VIEEFLVLLSVCHTV 900
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195151381|ref|XP_002016626.1| GL10402 [Drosophila persimilis] gi|194110473|gb|EDW32516.1| GL10402 [Drosophila persimilis] | Back alignment and taxonomy information |
|---|
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/437 (59%), Positives = 335/437 (76%), Gaps = 4/437 (0%)
Query: 41 ADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDV 100
+ RVI +N Q K+ N+ISTAKY++++F P FLFEQFRRYSN FFL IALLQQIPDV
Sbjct: 22 GERRVIILNGAQPVKYCNNRISTAKYNIISFLPSFLFEQFRRYSNCFFLLIALLQQIPDV 81
Query: 101 SPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKV 160
SPTGRYTTL+PL+ I+ VS +KEIIED+KRH AD EINHR ++ + NG +W +L V
Sbjct: 82 SPTGRYTTLVPLMFILSVSAVKEIIEDVKRHRADNEINHRPIERLENGTWSTVRWAELTV 141
Query: 161 GDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLA 220
GDI+KV N+FFP DL++LS+SE + MC+IET NLDGETNLK+RQ T+ L + L+
Sbjct: 142 GDIIKVSINTFFPADLIILSSSEPQAMCFIETANLDGETNLKIRQGVTATAGLLETKDLS 201
Query: 221 QLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPD 280
L+G+IEC+ PNR +Y+F G KE G+ +V LG +++L RG+MLRNTAW+ G+VVY+G +
Sbjct: 202 MLQGRIECELPNRHLYEFNGVLKEFGKQSVSLGNDQVLQRGAMLRNTAWVFGVVVYSGQE 261
Query: 281 SKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYL-LS 339
+KLMKN+TSAPLKRSTVDK+TNTQ +MLF++L++LC S + WT + DWYL LS
Sbjct: 262 TKLMKNSTSAPLKRSTVDKLTNTQILMLFMILISLCIASGLCNLFWTREHSETDWYLGLS 321
Query: 340 --RNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAART 397
++ S NLLTF ILYNNLIPISLQVTLE+VRF+QA FIN D++MY+EP+DTPA ART
Sbjct: 322 DFKSLSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMYHEPSDTPAMART 381
Query: 398 SNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSI 457
SNLNEELGMVK++FSDKTGTLT+NVM FK CS+AG+I P ++ R+ S
Sbjct: 382 SNLNEELGMVKYIFSDKTGTLTQNVMVFKKCSIAGHIYAPQRTPEESLLVQNILRRHESA 441
Query: 458 EPVVREFLTMLAVCHTV 474
E V+ EFL +L+VCHTV
Sbjct: 442 E-VIEEFLVLLSVCHTV 457
|
Source: Drosophila persimilis Species: Drosophila persimilis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195122372|ref|XP_002005685.1| GI18942 [Drosophila mojavensis] gi|193910753|gb|EDW09620.1| GI18942 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/439 (59%), Positives = 332/439 (75%), Gaps = 10/439 (2%)
Query: 42 DHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVS 101
D R+I +N PQ K+ N+ISTAKY+++TF P FLFEQFRRYSNIFFL IALLQQIPDVS
Sbjct: 27 DKRIITLNGPQPTKYCNNRISTAKYNVLTFIPSFLFEQFRRYSNIFFLLIALLQQIPDVS 86
Query: 102 PTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVG 161
PTGRYTTL+PL+ I+ VS IKEIIED+KRH AD EINHR ++ + NG +W +L VG
Sbjct: 87 PTGRYTTLVPLVFILSVSAIKEIIEDVKRHRADNEINHRVIERLENGTWTTVRWSELTVG 146
Query: 162 DIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQ 221
DI+KV ++FFP DL++LS+SE + MC+IET NLDGETNLK+RQ T+ L D L Q
Sbjct: 147 DIIKVVIDTFFPADLILLSSSEPQAMCFIETANLDGETNLKIRQGMPSTAKLLDTKDLTQ 206
Query: 222 LKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDS 281
L+G+IEC+ PNR +Y+F G KE G+ AVPLG +++L RG+MLRNT WI G+V+Y+G ++
Sbjct: 207 LQGRIECELPNRLLYEFNGVLKEFGKPAVPLGNDQVLQRGAMLRNTPWIFGVVIYSGHET 266
Query: 282 KLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYL---L 338
KLMKN+TSAPLKRSTVDK+TNTQ +MLF++L++LC S + WT + DWYL
Sbjct: 267 KLMKNSTSAPLKRSTVDKLTNTQILMLFMILISLCITSGLCNLFWTQKHSPTDWYLGIGD 326
Query: 339 SRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTS 398
++ S NLLTF ILYNNLIPISLQVTLE+VRF+QA FIN D++MY+ ++ PA+ARTS
Sbjct: 327 FKSLSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMYHAESNMPASARTS 386
Query: 399 NLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRM---IARNP 455
NLNEELG++K++FSDKTGTLTRNVMEFK CS+A I + + E+S + I R
Sbjct: 387 NLNEELGLIKYIFSDKTGTLTRNVMEFKKCSIAKRI----YQTERTPEESELVQNILRRH 442
Query: 456 SIEPVVREFLTMLAVCHTV 474
+ EFL +L+VCHTV
Sbjct: 443 ESSRDIEEFLVLLSVCHTV 461
|
Source: Drosophila mojavensis Species: Drosophila mojavensis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194883351|ref|XP_001975766.1| GG22494 [Drosophila erecta] gi|190658953|gb|EDV56166.1| GG22494 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/437 (59%), Positives = 335/437 (76%), Gaps = 4/437 (0%)
Query: 41 ADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDV 100
+ RVIN+N PQ K+ N+I+TAKYS ++F P FLFEQFRRYSN FFL IA+LQQIP+V
Sbjct: 163 GERRVINLNGPQPTKYCNNRITTAKYSFISFLPAFLFEQFRRYSNCFFLLIAILQQIPEV 222
Query: 101 SPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKV 160
SPTGRYTTL+PL+ I+ VS IKEIIEDIKRH AD EINHRS++ + +G +W +L V
Sbjct: 223 SPTGRYTTLVPLMFILSVSAIKEIIEDIKRHRADNEINHRSIERLDSGSWNTVRWSELSV 282
Query: 161 GDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLA 220
GDI+KV N+FFP DL++LS+SE + MC+IET NLDGETNLK+RQA T+ L + L
Sbjct: 283 GDIIKVGINTFFPADLILLSSSEPQAMCFIETANLDGETNLKIRQALPATAELLETKDLQ 342
Query: 221 QLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPD 280
+L+G+IEC+ PNR +Y+F G +E G+ LG +++L RG++LRNTAW+ GIVVY+G +
Sbjct: 343 RLQGRIECELPNRHLYEFNGVLRETGKPPAALGNDQVLQRGAILRNTAWVFGIVVYSGQE 402
Query: 281 SKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYL-LS 339
+KLMKN+TSAPLKRSTVDK+TNTQ +MLF++L++LC +S + WT + DWYL L+
Sbjct: 403 TKLMKNSTSAPLKRSTVDKLTNTQILMLFMILISLCIVSGLCNLFWTREHSETDWYLGLT 462
Query: 340 --RNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAART 397
+ S NLLTF ILYNNLIPISLQVTLE+VRF+QA FIN D++MY+E ++TPA ART
Sbjct: 463 DFKTKSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMYHEESNTPAMART 522
Query: 398 SNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSI 457
SNLNEELGMVK++FSDKTGTLT+NVMEFK CS+AG + Q +++R+ +
Sbjct: 523 SNLNEELGMVKYIFSDKTGTLTQNVMEFKKCSIAGYVYSAERTPEESQLVQNILSRHET- 581
Query: 458 EPVVREFLTMLAVCHTV 474
V+ EFL +L+VCHTV
Sbjct: 582 SAVIEEFLELLSVCHTV 598
|
Source: Drosophila erecta Species: Drosophila erecta Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242004602|ref|XP_002423169.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212506134|gb|EEB10431.1| conserved hypothetical protein [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/473 (56%), Positives = 342/473 (72%), Gaps = 28/473 (5%)
Query: 8 ESSRKLISGNPTSTGAGGGSQPTIDTVDCITGKADHRVININAPQSCKFVGNKISTAKYS 67
ES R ++G S +GG +P + + R ININ Q KF NK+STAKYS
Sbjct: 23 ESGRHNVAG---SINSGGTDEP----------EDNRRHININEEQISKFCSNKVSTAKYS 69
Query: 68 LVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIED 127
L +F P FLFEQFR+YSNIFFLFIALLQQIPDVSPTGRYTTLIPL+ I+ VS +KEI+ED
Sbjct: 70 LFSFLPIFLFEQFRKYSNIFFLFIALLQQIPDVSPTGRYTTLIPLVFILTVSAVKEIVED 129
Query: 128 IKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGM 187
KRH AD E NHR +V+RNG +W+++ VGDIVK+ NN FFP D+++LS+SE + +
Sbjct: 130 FKRHRADRETNHRKAEVLRNGHWDDVKWRNVVVGDIVKIRNNQFFPADVVLLSSSEPQAI 189
Query: 188 CYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGR 247
C++ET NLDGETNLK+RQ + TS + + L LKG ++C+ PNR +Y+F G G
Sbjct: 190 CFVETSNLDGETNLKIRQGLSATSYILETKDLISLKGSLQCEIPNRLLYEFKGVLHLSGE 249
Query: 248 TAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIM 307
++PLGP+++LLRG+ LRNT W+ GIV+YTG ++KLMKN++ PLKRS+VDK+TN Q +M
Sbjct: 250 RSLPLGPDQVLLRGAQLRNTTWVFGIVIYTGHETKLMKNSSRVPLKRSSVDKMTNVQILM 309
Query: 308 LFVLLLALCFISAAASTIWTLGRNAGDWYL-LSR--NPSFHSNLLTFIILYNNLIPISLQ 364
LF +L+ LC +SA + +WT DWY+ LS+ N +F NLLTFIILYNNLIPISLQ
Sbjct: 310 LFFILIVLCLVSAIFNELWTRVHWEKDWYIALSQLDNSNFGFNLLTFIILYNNLIPISLQ 369
Query: 365 VTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVME 424
V++E+VR +QA+FIN D+DMYYE +DTPA ARTSNLNEELGMVK+VFSDKTGTLTRN+ME
Sbjct: 370 VSIEVVRIVQASFINMDLDMYYEESDTPAMARTSNLNEELGMVKYVFSDKTGTLTRNIME 429
Query: 425 FKICSVAG---NILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTV 474
FK CS+AG I PN N RN + V+ F+ +L+VCHTV
Sbjct: 430 FKKCSIAGIMYTIDDPNLVEN---------YRNHKNKEYVKLFMELLSVCHTV 473
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|221330213|ref|NP_725290.2| CG42321, isoform K [Drosophila melanogaster] gi|220902198|gb|AAF58378.3| CG42321, isoform K [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/437 (59%), Positives = 334/437 (76%), Gaps = 4/437 (0%)
Query: 41 ADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDV 100
+ R+IN+N PQ K+ N+I+TAKYS ++F P FLFEQFRRYSN FFL IA+LQQIP+V
Sbjct: 40 GERRIINLNGPQPTKYGNNRITTAKYSFISFLPAFLFEQFRRYSNCFFLLIAILQQIPEV 99
Query: 101 SPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKV 160
SPTGRYTTL+PL+ I+ VS IKEIIEDIKRH AD EINHRS++ + +G +W +L V
Sbjct: 100 SPTGRYTTLVPLMFILSVSAIKEIIEDIKRHRADNEINHRSIERLDSGSWCTVRWSELTV 159
Query: 161 GDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLA 220
GDI+KV N+FFP DL++LS+SE + MC+IET NLDGETNLK+RQA T+ L + L
Sbjct: 160 GDIIKVGINTFFPADLILLSSSEPQAMCFIETANLDGETNLKIRQALPATAELLETKDLQ 219
Query: 221 QLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPD 280
+L+G+IEC+ PNR +Y+F G +E G+ LG +++L RG++LRNTAW+ GIVVY+G +
Sbjct: 220 RLEGRIECELPNRHLYEFNGVLRETGKPPAALGNDQVLQRGAILRNTAWVFGIVVYSGQE 279
Query: 281 SKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYL-LS 339
+KLMKN+TSAPLKRSTVDK+TNTQ +MLF++L++LC IS + WT + DWYL L+
Sbjct: 280 TKLMKNSTSAPLKRSTVDKLTNTQILMLFMILISLCIISGLCNLFWTREHSETDWYLGLT 339
Query: 340 --RNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAART 397
+ S NLLTF ILYNNLIPISLQVTLE+VRF+QA FIN D++MY+E ++TPA ART
Sbjct: 340 DFKTKSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMYHEESNTPAMART 399
Query: 398 SNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSI 457
SNLNEELGMVK++FSDKTGTLT+NVMEFK CS+AG + Q ++ R+ +
Sbjct: 400 SNLNEELGMVKYIFSDKTGTLTQNVMEFKKCSIAGYVYTAERTPEESQLVQNILGRHET- 458
Query: 458 EPVVREFLTMLAVCHTV 474
V+ EFL +L+VCHTV
Sbjct: 459 SAVIEEFLELLSVCHTV 475
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195583058|ref|XP_002081341.1| GD25762 [Drosophila simulans] gi|194193350|gb|EDX06926.1| GD25762 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/437 (59%), Positives = 334/437 (76%), Gaps = 4/437 (0%)
Query: 41 ADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDV 100
+ RVIN+N PQ K+ N+I+TAKYS ++F P FLFEQFRRYSN FFL IA+LQQIP+V
Sbjct: 40 GERRVINLNGPQPTKYGNNRITTAKYSFISFLPAFLFEQFRRYSNCFFLLIAILQQIPEV 99
Query: 101 SPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKV 160
SPTGRYTTL+PL+ I+ VS IKEIIEDIKRH AD EINHRS++ + +G +W +L V
Sbjct: 100 SPTGRYTTLVPLMFILSVSAIKEIIEDIKRHRADNEINHRSIERLDSGSWCTVRWSELTV 159
Query: 161 GDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLA 220
GDI+KV N+FFP DL++LS+SE + MC+IET NLDGETNLK+RQA T+ L + L
Sbjct: 160 GDIIKVGINTFFPADLILLSSSEPQAMCFIETANLDGETNLKIRQALPATAELLETKDLQ 219
Query: 221 QLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPD 280
+L+G+IEC+ PNR +Y+F G +E G+ LG +++L RG++LRNTAW+ GIVVY+G +
Sbjct: 220 RLEGRIECELPNRHLYEFNGVLRETGKPPAALGNDQVLQRGAILRNTAWVFGIVVYSGQE 279
Query: 281 SKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYL-LS 339
+KLMKN+TSAPLKRSTVDK+TNTQ +MLF++L++LC IS + WT + DWYL L+
Sbjct: 280 TKLMKNSTSAPLKRSTVDKLTNTQILMLFMILISLCIISGLCNLFWTREHSETDWYLGLT 339
Query: 340 --RNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAART 397
+ S NLLTF ILYNNLIPISLQVTLE+VRF+QA FIN D++MY+E ++TPA ART
Sbjct: 340 DFKTKSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMYHEESNTPAMART 399
Query: 398 SNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSI 457
SNLNEELGMVK++FSDKTGTLT+NVMEFK CS+AG + Q ++ R+ +
Sbjct: 400 SNLNEELGMVKYIFSDKTGTLTQNVMEFKKCSIAGYVYTAERTPEESQLVQNILGRHET- 458
Query: 458 EPVVREFLTMLAVCHTV 474
V+ EFL +L+VCHTV
Sbjct: 459 SAVIEEFLELLSVCHTV 475
|
Source: Drosophila simulans Species: Drosophila simulans Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1045 | ||||||
| FB|FBgn0259221 | 1350 | CG42321 [Drosophila melanogast | 0.413 | 0.32 | 0.591 | 3e-238 | |
| MGI|MGI:1330848 | 1149 | Atp8a1 "ATPase, aminophospholi | 0.427 | 0.389 | 0.549 | 1.8e-221 | |
| UNIPROTKB|F1NX55 | 1150 | ATP8A1 "Uncharacterized protei | 0.427 | 0.388 | 0.554 | 7.2e-218 | |
| UNIPROTKB|F1PHG9 | 1164 | ATP8A1 "Uncharacterized protei | 0.388 | 0.348 | 0.590 | 8.6e-218 | |
| UNIPROTKB|Q9Y2Q0 | 1164 | ATP8A1 "Probable phospholipid- | 0.388 | 0.348 | 0.585 | 1.4e-217 | |
| UNIPROTKB|Q29449 | 1149 | ATP8A1 "Probable phospholipid- | 0.427 | 0.389 | 0.555 | 1.9e-215 | |
| MGI|MGI:1354710 | 1148 | Atp8a2 "ATPase, aminophospholi | 0.376 | 0.342 | 0.585 | 9.8e-215 | |
| UNIPROTKB|Q9NTI2 | 1148 | ATP8A2 "Probable phospholipid- | 0.376 | 0.342 | 0.588 | 1.3e-214 | |
| UNIPROTKB|F1PNZ3 | 1188 | ATP8A2 "Uncharacterized protei | 0.376 | 0.330 | 0.588 | 2.6e-214 | |
| UNIPROTKB|F1P2K5 | 1046 | ATP8A2 "Uncharacterized protei | 0.376 | 0.375 | 0.601 | 5.9e-212 |
| FB|FBgn0259221 CG42321 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1352 (481.0 bits), Expect = 3.0e-238, Sum P(2) = 3.0e-238
Identities = 258/436 (59%), Positives = 334/436 (76%)
Query: 42 DHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVS 101
+ R+IN+N PQ K+ N+I+TAKYS ++F P FLFEQFRRYSN FFL IA+LQQIP+VS
Sbjct: 215 ERRIINLNGPQPTKYGNNRITTAKYSFISFLPAFLFEQFRRYSNCFFLLIAILQQIPEVS 274
Query: 102 PTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVG 161
PTGRYTTL+PL+ I+ VS IKEIIEDIKRH AD EINHRS++ + +G +W +L VG
Sbjct: 275 PTGRYTTLVPLMFILSVSAIKEIIEDIKRHRADNEINHRSIERLDSGSWCTVRWSELTVG 334
Query: 162 DIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQ 221
DI+KV N+FFP DL++LS+SE + MC+IET NLDGETNLK+RQA T+ L + L +
Sbjct: 335 DIIKVGINTFFPADLILLSSSEPQAMCFIETANLDGETNLKIRQALPATAELLETKDLQR 394
Query: 222 LKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDS 281
L+G+IEC+ PNR +Y+F G +E G+ LG +++L RG++LRNTAW+ GIVVY+G ++
Sbjct: 395 LEGRIECELPNRHLYEFNGVLRETGKPPAALGNDQVLQRGAILRNTAWVFGIVVYSGQET 454
Query: 282 KLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYL-LS- 339
KLMKN+TSAPLKRSTVDK+TNTQ +MLF++L++LC IS + WT + DWYL L+
Sbjct: 455 KLMKNSTSAPLKRSTVDKLTNTQILMLFMILISLCIISGLCNLFWTREHSETDWYLGLTD 514
Query: 340 -RNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTS 398
+ S NLLTF ILYNNLIPISLQVTLE+VRF+QA FIN D++MY+E ++TPA ARTS
Sbjct: 515 FKTKSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMYHEESNTPAMARTS 574
Query: 399 NLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIE 458
NLNEELGMVK++FSDKTGTLT+NVMEFK CS+AG + Q ++ R+ +
Sbjct: 575 NLNEELGMVKYIFSDKTGTLTQNVMEFKKCSIAGYVYTAERTPEESQLVQNILGRHET-S 633
Query: 459 PVVREFLTMLAVCHTV 474
V+ EFL +L+VCHTV
Sbjct: 634 AVIEEFLELLSVCHTV 649
|
|
| MGI|MGI:1330848 Atp8a1 "ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1248 (444.4 bits), Expect = 1.8e-221, Sum P(4) = 1.8e-221
Identities = 252/459 (54%), Positives = 318/459 (69%)
Query: 26 GSQPTIDTVDCITGKADH---RVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRR 82
G + T D V T AD R I IN PQ KF N +STAKY+++TF P FL+ QFRR
Sbjct: 17 GYEKT-DDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNVITFLPRFLYSQFRR 75
Query: 83 YSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSV 142
+N FFLFIALLQQIPDVSPTGRYTTL+PL+ I+ V+ IKEIIEDIKRH AD +N +
Sbjct: 76 AANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQT 135
Query: 143 DVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLK 202
V+RNG + W+ + VGDIV + + P D ++LS+SE + MCYIET NLDGETNLK
Sbjct: 136 QVLRNGAWEIVHWEKVNVGDIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLK 195
Query: 203 VRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGS 262
+RQ TS + D SL ++ G+IEC+ PNR +YDF GN + G VPLG ++ILLRG+
Sbjct: 196 IRQGLPATSDIKDIDSLMRISGRIECESPNRHLYDFVGNIRLDGHGTVPLGADQILLRGA 255
Query: 263 MLRNTAWIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAA 322
LRNT W+ GIVVYTG D+KLM+N+TS PLK S V++ITN Q ++LF +L+A+ + +
Sbjct: 256 QLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVG 315
Query: 323 STIWTLGRNAGDWYL---LSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFIN 379
S IW + DWYL +F N LTFIIL+NNLIPISL VTLE+V+F QA FIN
Sbjct: 316 SAIWNRRHSGKDWYLHLHYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFIN 375
Query: 380 NDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPN- 438
D+DM+YEPTDT A ARTSNLNEELG VK++FSDKTGTLT NVM+FK C++AG +
Sbjct: 376 WDLDMHYEPTDTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQSS 435
Query: 439 -FNSNNV-QEQSRM--IARNPSIEPVVREFLTMLAVCHT 473
F + S + + N P++ EFLTM+AVCHT
Sbjct: 436 QFGDEKTFNDPSLLDNLQNNHPTAPIICEFLTMMAVCHT 474
|
|
| UNIPROTKB|F1NX55 ATP8A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1247 (444.0 bits), Expect = 7.2e-218, Sum P(3) = 7.2e-218
Identities = 255/460 (55%), Positives = 321/460 (69%)
Query: 26 GSQPTIDTVDCITGKADH---RVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRR 82
G + T D V T AD R I IN PQ KF N +STAKY+++TF P FL+ QFRR
Sbjct: 17 GYEKT-DDVSEKTSLADQEELRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRR 75
Query: 83 YSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSV 142
+N FFLFIALLQQIPDVSPTGRYTTL+PL+ I+ V+ +KEIIEDIKRH AD +N +
Sbjct: 76 AANAFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAVKEIIEDIKRHKADNAVNKKQT 135
Query: 143 DVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLK 202
V+RNG + W+ + VGDIV + + P D ++LS+SE + MCYIET NLDGETNLK
Sbjct: 136 QVLRNGAWEIVHWEKVDVGDIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLK 195
Query: 203 VRQAPNE-TSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRG 261
+RQ TS + D SL +L G+IEC+ PNR +YDF GN + G VPLG ++ILLRG
Sbjct: 196 IRQQGLPLTSDIKDIESLMRLSGRIECESPNRHLYDFVGNIRLDGHGTVPLGSDQILLRG 255
Query: 262 SMLRNTAWIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAA 321
+ LRNT W+ GIVVYTG D+KLM+N+TS PLK S V++ITN Q ++LF +L+A+ I +
Sbjct: 256 AQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKMSNVERITNIQILILFCILIAMSLICSI 315
Query: 322 ASTIWTLGRNAGDWYL-LSRN--PSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFI 378
S +W + DWYL L+ +F N LTFIIL+NNLIPISL VTLE+V+FIQA FI
Sbjct: 316 GSAVWNRRHSERDWYLDLNYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFIQAYFI 375
Query: 379 NNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNIL--- 435
N D+DM+YEPTDT A ARTSNLNEELG VK++FSDKTGTLT NVM+FK C+VAG
Sbjct: 376 NWDIDMHYEPTDTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTVAGVAYGQG 435
Query: 436 VPNFNSNNVQEQSRM--IARNPSIEPVVREFLTMLAVCHT 473
N + + S + + N P++ EFLTM+AVCHT
Sbjct: 436 SQNGDEKMFSDSSLLENLQNNHPTAPIICEFLTMMAVCHT 475
|
|
| UNIPROTKB|F1PHG9 ATP8A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1222 (435.2 bits), Expect = 8.6e-218, Sum P(4) = 8.6e-218
Identities = 244/413 (59%), Positives = 301/413 (72%)
Query: 26 GSQPTIDTVDCITGKADH---RVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRR 82
G + T D V T AD R I IN PQ KF N +STAKY+++TF P FL+ QFRR
Sbjct: 17 GYEKT-DDVSEKTSLADQEEVRTILINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRR 75
Query: 83 YSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSV 142
+N FFLFIALLQQIPDVSPTGRYTTL+PL+ I+ V+ IKEIIEDIKRH AD +N +
Sbjct: 76 AANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQT 135
Query: 143 DVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLK 202
V+RNG + W+ + VG+IVKV N P DL+ LS+SE + MCYIET NLDGETNLK
Sbjct: 136 QVLRNGAWEIVHWEKVAVGEIVKVTNGEHLPADLISLSSSEPQAMCYIETSNLDGETNLK 195
Query: 203 VRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGS 262
+RQ TS + D SL +L G+IEC+ PNR +YDF GN + G + VPLG ++ILLRG+
Sbjct: 196 IRQGLPATSDIKDIDSLMRLSGRIECESPNRHLYDFVGNIRLDGHSTVPLGADQILLRGA 255
Query: 263 MLRNTAWIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAA 322
LRNT W+ GIVVYTG D+KLM+N+TS PLK S V++ITN Q ++LF +L+A+ I +
Sbjct: 256 QLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLICSVG 315
Query: 323 STIWTLGRNAGDWYL-LSRNPS--FHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFIN 379
S IW + DWYL L+ + F N LTFIIL+NNLIPISL VTLE+V+F QA FIN
Sbjct: 316 SAIWNRRHSGKDWYLNLNYGGANNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFIN 375
Query: 380 NDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAG 432
D+DM+YEPTDT A ARTSNLNEELG VK++FSDKTGTLT NVM+FK C++AG
Sbjct: 376 WDLDMHYEPTDTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAG 428
|
|
| UNIPROTKB|Q9Y2Q0 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1218 (433.8 bits), Expect = 1.4e-217, Sum P(4) = 1.4e-217
Identities = 242/413 (58%), Positives = 300/413 (72%)
Query: 26 GSQPTIDTVDCITGKADH---RVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRR 82
G + T D V T AD R I IN PQ KF N +STAKY+++TF P FL+ QFRR
Sbjct: 17 GYEKT-DDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRR 75
Query: 83 YSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSV 142
+N FFLFIALLQQIPDVSPTGRYTTL+PL+ I+ V+ IKEIIEDIKRH AD +N +
Sbjct: 76 AANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQT 135
Query: 143 DVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLK 202
V+RNG + W+ + VG+IVKV N P DL+ LS+SE + MCYIET NLDGETNLK
Sbjct: 136 QVLRNGAWEIVHWEKVAVGEIVKVTNGEHLPADLISLSSSEPQAMCYIETSNLDGETNLK 195
Query: 203 VRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGS 262
+RQ TS + D SL ++ G+IEC+ PNR +YDF GN + G VPLG ++ILLRG+
Sbjct: 196 IRQGLPATSDIKDVDSLMRISGRIECESPNRHLYDFVGNIRLDGHGTVPLGADQILLRGA 255
Query: 263 MLRNTAWIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAA 322
LRNT W+ GIVVYTG D+KLM+N+TS PLK S V++ITN Q ++LF +L+A+ + +
Sbjct: 256 QLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVG 315
Query: 323 STIWTLGRNAGDWYL-LSRN--PSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFIN 379
S IW + DWYL L+ +F N LTFIIL+NNLIPISL VTLE+V+F QA FIN
Sbjct: 316 SAIWNRRHSGKDWYLNLNYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFIN 375
Query: 380 NDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAG 432
D+DM+YEPTDT A ARTSNLNEELG VK++FSDKTGTLT NVM+FK C++AG
Sbjct: 376 WDLDMHYEPTDTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAG 428
|
|
| UNIPROTKB|Q29449 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1261 (449.0 bits), Expect = 1.9e-215, Sum P(3) = 1.9e-215
Identities = 255/459 (55%), Positives = 320/459 (69%)
Query: 26 GSQPTIDTVDCITGKADH---RVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRR 82
G + T D V T AD R I IN PQ KF N +STAKY+++TF P FL+ QFRR
Sbjct: 17 GYEKT-DDVSEKTSLADQEEIRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRR 75
Query: 83 YSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSV 142
+N FFLFIALLQQIPDVSPTGRYTTL+PL+ I+ V+ IKEIIEDIKRH AD +N +
Sbjct: 76 AANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQT 135
Query: 143 DVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLK 202
V+RNG + W+ + VGDIV + + P D ++LS+SE + MCYIET NLDGETNLK
Sbjct: 136 QVLRNGAWEIVHWEKVNVGDIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLK 195
Query: 203 VRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGS 262
+RQ TS + D SL +L G+IEC+ PNR +YDF GN + GR+ VPLG ++ILLRG+
Sbjct: 196 IRQGLPATSDIKDIDSLMRLSGRIECESPNRHLYDFVGNIRLDGRSTVPLGADQILLRGA 255
Query: 263 MLRNTAWIIGIVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAA 322
LRNT W+ GIVVYTG D+KLM+N+TS PLK S V++ITN Q ++LF +L+A+ + +
Sbjct: 256 QLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVG 315
Query: 323 STIWTLGRNAGDWYL-LSRNPS--FHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFIN 379
S IW + DWYL L+ + F N LTFIIL+NNLIPISL VTLE+V+F QA FIN
Sbjct: 316 SAIWNRRHSGRDWYLNLNYGGANNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFIN 375
Query: 380 NDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPN- 438
D+DM+YEPTDT A ARTSNLN ELG VK++FSDKTGTLT NVM+FK C++AG N
Sbjct: 376 WDLDMHYEPTDTAAMARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNS 435
Query: 439 -FNSNNVQEQSRMIAR---NPSIEPVVREFLTMLAVCHT 473
F S ++ N P++ EFLTM+AVCHT
Sbjct: 436 QFGDEKTFSDSSLLENLQNNHPTAPIICEFLTMMAVCHT 474
|
|
| MGI|MGI:1354710 Atp8a2 "ATPase, aminophospholipid transporter-like, class I, type 8A, member 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1232 (438.7 bits), Expect = 9.8e-215, Sum P(4) = 9.8e-215
Identities = 232/396 (58%), Positives = 297/396 (75%)
Query: 40 KADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPD 99
+A R+I +N KF N+ISTAKYS++TF P FL+EQ RR +N FFLFIALLQQIPD
Sbjct: 12 EAPARIIYLNQSHLNKFCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPD 71
Query: 100 VSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLK 159
VSPTGRYTTL+PL++I+ ++GIKEIIED KRH AD +N + V+RNGM + WK++
Sbjct: 72 VSPTGRYTTLVPLVIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVA 131
Query: 160 VGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSL 219
VGDIVKV N + P D+++ S+SE +GMCY+ET NLDGETNLK+RQ + T+ + L
Sbjct: 132 VGDIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTTDMQTRDVL 191
Query: 220 AQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGP 279
+L G+IEC+ PNR +YDFTGN G+++V LGP++ILLRG+ LRNT W+ G+VVYTG
Sbjct: 192 MKLSGRIECEGPNRHLYDFTGNLHLDGKSSVALGPDQILLRGTQLRNTQWVFGVVVYTGH 251
Query: 280 DSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLL- 338
DSKLM+N+T APLKRS V+K+TN Q ++LF +LL + +S+ + W WY+
Sbjct: 252 DSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGSHGGKSWYIKK 311
Query: 339 --SRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR 396
+ + +F NLLTFIILYNNLIPISL VTLE+V++ QA FIN DMDMYY DTPA AR
Sbjct: 312 MDTNSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDMDMYYIENDTPAMAR 371
Query: 397 TSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAG 432
TSNLNEELG VK++FSDKTGTLT N+M FK CS+AG
Sbjct: 372 TSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAG 407
|
|
| UNIPROTKB|Q9NTI2 ATP8A2 "Probable phospholipid-transporting ATPase IB" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1223 (435.6 bits), Expect = 1.3e-214, Sum P(4) = 1.3e-214
Identities = 233/396 (58%), Positives = 296/396 (74%)
Query: 40 KADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPD 99
+A R I +N P KF N+ISTAKYS++TF P FL+EQ RR +N FFLFIALLQQIPD
Sbjct: 12 EAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPD 71
Query: 100 VSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLK 159
VSPTGRYTTL+PLI+I+ ++GIKEI+ED KRH AD +N + V+RNGM + WK++
Sbjct: 72 VSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVA 131
Query: 160 VGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSL 219
VGDIVKV N + P D+++LS+SE + MCY+ET NLDGETNLK+RQ + T+ + L
Sbjct: 132 VGDIVKVVNGQYLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQTREVL 191
Query: 220 AQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGP 279
+L G IEC+ PNR +YDFTGN G++ V LGP++ILLRG+ LRNT W+ GIVVYTG
Sbjct: 192 MKLSGTIECEGPNRHLYDFTGNLNLDGKSLVALGPDQILLRGTQLRNTQWVFGIVVYTGH 251
Query: 280 DSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLL- 338
D+KLM+N+T APLKRS V+K+TN Q ++LF +LL + +S+A + W +WY+
Sbjct: 252 DTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSAGALYWNRSHGEKNWYIKK 311
Query: 339 --SRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR 396
+ + +F NLLTFIILYNNLIPISL VTLE+V++ QA FIN D DMYY DTPA AR
Sbjct: 312 MDTTSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYIGNDTPAMAR 371
Query: 397 TSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAG 432
TSNLNEELG VK++FSDKTGTLT N+M FK CS+AG
Sbjct: 372 TSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAG 407
|
|
| UNIPROTKB|F1PNZ3 ATP8A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1226 (436.6 bits), Expect = 2.6e-214, Sum P(4) = 2.6e-214
Identities = 233/396 (58%), Positives = 296/396 (74%)
Query: 40 KADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPD 99
+A R I +N P KF N+ISTAKYS++TF P FL+EQ RR +N FFLFIALLQQIPD
Sbjct: 52 EAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPD 111
Query: 100 VSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLK 159
VSPTGRYTTL+PLI+I+ ++GIKEI+ED KRH AD +N + V+RNGM + WK++
Sbjct: 112 VSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVA 171
Query: 160 VGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSL 219
VGDIVKV N + P D+ +LS+SE + MCY+ET NLDGETNLK+RQ + T+ + L
Sbjct: 172 VGDIVKVINGQYLPADMALLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQTREVL 231
Query: 220 AQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGP 279
+L G IEC+ PNR +YDFTGN G++ VPLGP++ILLRG+ LRNT W+ GIVVYTG
Sbjct: 232 MKLSGTIECEGPNRHLYDFTGNLHVDGKSPVPLGPDQILLRGTQLRNTQWVFGIVVYTGH 291
Query: 280 DSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLL- 338
D+KLM+N+T APLKRS V+K+TN Q ++LF +LL + +S+ + W + +WY+
Sbjct: 292 DTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALYWNGSQGGKNWYIKK 351
Query: 339 --SRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR 396
+ + +F NLLTFIILYNNLIPISL VTLE+V++ QA FIN D DMYY DTPA AR
Sbjct: 352 MDTTSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYLGNDTPAMAR 411
Query: 397 TSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAG 432
TSNLNEELG VK++FSDKTGTLT N+M FK CS+AG
Sbjct: 412 TSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAG 447
|
|
| UNIPROTKB|F1P2K5 ATP8A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1232 (438.7 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 238/396 (60%), Positives = 298/396 (75%)
Query: 40 KADHRVININAPQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPD 99
+A R I +N PQ KF N +STAKYS+VTF P FL+EQ R+ +N FFLFIALLQQIPD
Sbjct: 31 EAPARTIYVNQPQQSKFRDNWVSTAKYSVVTFLPRFLYEQIRKAANAFFLFIALLQQIPD 90
Query: 100 VSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLK 159
VSPTGRYTTL+PL+ I+ V+GIKEIIED KRH AD +N + V+RNGM WK++
Sbjct: 91 VSPTGRYTTLVPLLFILTVAGIKEIIEDYKRHKADSAVNKKKTVVLRNGMWQDIVWKEVA 150
Query: 160 VGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSL 219
VGDIVKV N P D++++S+SE + MCYIET NLDGETNLK+RQ + T+SL L
Sbjct: 151 VGDIVKVTNGQHLPADMIIISSSEPQAMCYIETANLDGETNLKIRQGLSLTASLQSREEL 210
Query: 220 AQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGP 279
++ G+IEC+ PNR +YDFTG + G++ VP+GP++ILLRG+ LRNT W++GIVVYTG
Sbjct: 211 MKVSGRIECEGPNRHLYDFTGTLRLDGQSPVPVGPDQILLRGAQLRNTQWVLGIVVYTGF 270
Query: 280 DSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLS 339
D+KLM+N+T APLKRS V+K+TN Q ++LF +LL + +S+ + +W WYL S
Sbjct: 271 DTKLMQNSTKAPLKRSNVEKVTNMQILVLFCILLVMALVSSVGALLWNRTHGEVVWYLGS 330
Query: 340 R---NPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR 396
+ +F NLLTFIILYNNLIPISL VTLE+V+F QA FIN DMDMYY TDTPA AR
Sbjct: 331 NKMLSVNFGYNLLTFIILYNNLIPISLLVTLEVVKFTQALFINWDMDMYYPETDTPAMAR 390
Query: 397 TSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAG 432
TSNLNEELG VK++FSDKTGTLT N+M FK CS+AG
Sbjct: 391 TSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAG 426
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q29449 | AT8A1_BOVIN | 3, ., 6, ., 3, ., 1 | 0.5562 | 0.4229 | 0.3846 | yes | N/A |
| P98200 | AT8A2_MOUSE | 3, ., 6, ., 3, ., 1 | 0.5434 | 0.4153 | 0.3780 | yes | N/A |
| Q9NTI2 | AT8A2_HUMAN | 3, ., 6, ., 3, ., 1 | 0.5307 | 0.4392 | 0.3998 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1045 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 1e-173 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 1e-106 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 7e-97 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 2e-87 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-68 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-56 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 2e-54 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 2e-46 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 9e-42 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-39 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-27 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 4e-14 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 1e-11 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-11 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-09 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-08 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-07 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-06 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 8e-04 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 0.002 | |
| PRK11133 | 322 | PRK11133, serB, phosphoserine phosphatase; Provisi | 0.002 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.003 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 0.003 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 0.004 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 535 bits (1380), Expect = e-173
Identities = 220/472 (46%), Positives = 296/472 (62%), Gaps = 42/472 (8%)
Query: 56 FVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILI 115
F NKIST KY+++TF P LFEQF+R++N++FL +ALLQQ+P +SPT R T+++PL +
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 116 MVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVE-QWKDLKVGDIVKVYNNSFFPG 174
++V+ IKE IEDI+R D E+N+R +V+ +VE WKDL+VGDIVKV + P
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 175 DLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRF 234
DL++LS+SE +G+CY+ET NLDGETNLK+RQA ET + D + G+IEC+ PN
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 235 IYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNATSAPLKR 294
+Y F GN G PL P+ ILLRG LRNT W+IG+VVYTG D+KLM+NAT AP KR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 295 STVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPS------FHSNL 348
S ++K N I+LF LL LC IS+ + IW WY+ +
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSF 300
Query: 349 LTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVK 408
LTF+IL+++LIPISL V+LE+V+ +QA FIN+D+ MY+E TDTPA+ RTSNLNEELG V+
Sbjct: 301 LTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVE 360
Query: 409 FVFSDKTGTLTRNVMEFKICSVAG-----------NILVPNFNSNNVQEQS--------- 448
++FSDKTGTLT+N+MEFK CS+AG + + S E S
Sbjct: 361 YIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLVESKGFT 420
Query: 449 -------RMIARNPSIEPVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKE 493
++ N + EF LA+CHTV VP FN + +E
Sbjct: 421 FVDPRLVDLLKTNKPNAKRINEFFLALALCHTV--------VPEFNDDGPEE 464
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 357 bits (917), Expect = e-106
Identities = 131/252 (51%), Positives = 175/252 (69%), Gaps = 2/252 (0%)
Query: 539 NNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVT 598
+ N AL+IDG +L YAL EL K+FL+L L C AVICCRVSP QKA+VV LV +T T
Sbjct: 712 SGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771
Query: 599 LAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMC 658
LAIGDGANDV+MIQ+A VGVGISG EG+QA ASD++IGQFRFL KLL VHG W+Y R+
Sbjct: 772 LAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRIS 831
Query: 659 LLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCS 718
+ILY FYKN+ +++ W++ Y+G+SGQ L+E W + LYNV FTA P +++G+ DQ S
Sbjct: 832 KMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVS 891
Query: 719 ARTRLKYPILYS--QTANTFNVKIFWIWIGNALFHSMLMFWIPMLIYGQGTIWANGKDGG 776
A L+YP LY Q F+ K FW W+ + ++ S+++F+ PM Y G ++G
Sbjct: 892 ASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSVDD 951
Query: 777 YLVLGNIVYTVT 788
+ +G IV+T
Sbjct: 952 FSSVGVIVFTAL 963
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 332 bits (853), Expect = 7e-97
Identities = 164/414 (39%), Positives = 249/414 (60%), Gaps = 27/414 (6%)
Query: 42 DHRVININAPQSC----KFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQI 97
D R++ +N P+ +F GN I TAKYS+ +F P LFEQF R + I+FL IA+L Q+
Sbjct: 69 DARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQL 128
Query: 98 PDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKD 157
P ++ GR +++PL +++V+ +K+ ED +RH +D N+R V+ + ++WKD
Sbjct: 129 PQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKD 188
Query: 158 LKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPS 217
++VG+I+K+ N P D+++LSTS+ G+ Y++T+NLDGE+NLK R A ET L+
Sbjct: 189 IRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQET--LSKIP 246
Query: 218 SLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYT 277
++ G I+C+ PNR IY F N + G+ + LGP I+LRG L+NTAW IG+ VY
Sbjct: 247 EKEKINGLIKCEKPNRNIYGFQANMEVDGKR-LSLGPSNIILRGCELKNTAWAIGVAVYC 305
Query: 278 GPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAG--DW 335
G ++K M N + AP KRS ++ N + I+L + L+ALC I + + +W L R+ D
Sbjct: 306 GRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVW-LRRHRDELDT 364
Query: 336 YLLSRNPSFHSN--------------LLTF---IILYNNLIPISLQVTLEIVRFIQATFI 378
R F TF +I++ +IPISL +++E+VR QA F+
Sbjct: 365 IPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFM 424
Query: 379 NNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAG 432
D MY E +++ R N+NE+LG +K+VFSDKTGTLT N MEF+ S+ G
Sbjct: 425 IRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWG 478
|
Length = 1178 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 304 bits (780), Expect = 2e-87
Identities = 128/249 (51%), Positives = 165/249 (66%), Gaps = 6/249 (2%)
Query: 802 PVVREFLTMLAVCHTVIPEMKD---GVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIE 858
+ EF LA+CHTV+PE D + Y A+SPDE AL+ A+ G+VF + K I
Sbjct: 438 KRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSIS 497
Query: 859 IT--ALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLDSH-SKY 915
+ GET+ Y ILNVLEF SDRKRMSVIVR P IK+ CKGAD +I RL S ++
Sbjct: 498 LLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQV 557
Query: 916 VDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIE 975
+ETK HLE +AS G RTLC ++ EE+Y+ W+ Y A+T++T+REE++ V E IE
Sbjct: 558 NEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617
Query: 976 TKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPL 1035
L LLGA+A+EDKLQE VPETI L +A I +WVLTGDK ETAINIGYS RL+ ++
Sbjct: 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQ 677
Query: 1036 LDLDGYSLD 1044
+ + SLD
Sbjct: 678 IVITSDSLD 686
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 250 bits (639), Expect = 1e-68
Identities = 113/247 (45%), Positives = 160/247 (64%), Gaps = 4/247 (1%)
Query: 524 ELKHRTALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQK 583
+ T +S ++ ALIIDG +L Y L EL + +L C+ V+CCRV+PLQK
Sbjct: 802 GISQNTGGSS--AAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQK 859
Query: 584 AEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLL 643
A +V LV T+ +TLAIGDGANDV+MIQ A VGVGISG EG QA ASD+++GQFRFL+
Sbjct: 860 AGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLV 919
Query: 644 KLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFT 703
LL VHG WNY RM +ILY+FY+N ++ W+ +++ ++ W+ LY+V++T
Sbjct: 920 PLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYT 979
Query: 704 AFPPLAIGILDQVCSARTRLKYPILY--SQTANTFNVKIFWIWIGNALFHSMLMFWIPML 761
A P + +GILD+ S RT LKYP LY Q +N K+FW+ + + L+ S ++F++P+
Sbjct: 980 ALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLF 1039
Query: 762 IYGQGTI 768
Y TI
Sbjct: 1040 AYWASTI 1046
|
Length = 1178 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 1e-56
Identities = 133/610 (21%), Positives = 219/610 (35%), Gaps = 111/610 (18%)
Query: 106 YTTLIPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVK 165
+ + L+ +++V K EDI R L+D +N R V+RNG + KDL GD+V
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKEIPA-KDLVPGDVVL 59
Query: 166 VYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQ 225
V + P D ++LS G C+++ NL GE+N ++ A ET G
Sbjct: 60 VKSGETVPADGVLLS-----GSCFVDESNLTGESNPVLKTALKETQ-----------SGT 103
Query: 226 IECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMK 285
I D Y F G V + P IL T I +VV TG +++
Sbjct: 104 ITGDLVFAGTYVFGGTLI------VVVTPTGIL-------TTVGRIAVVVKTGFETR--- 147
Query: 286 NATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFH 345
T KR ++ +LF+LLLAL W S
Sbjct: 148 --TPLQSKRDRLENFI----FILFLLLLALAVFLYLFIRGWD-------------PNSIF 188
Query: 346 SNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELG 405
LL +I+ ++P +L + + + D + + R N EELG
Sbjct: 189 KALLRALIVLVIVVPPALPAAVTVALAVG------DARLAKKG----ILVRNLNALEELG 238
Query: 406 MVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFL 465
V ++ SDKTGTLT+N M + + G +N S +P+ + L
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQGVYIDGG------KEDNSSSLVACDNNYLSGDPMEKALL 292
Query: 466 TMLAVCHTVCSVAGNILVPNFNSNNVKEQSRMIA-----RNPSIEPVVR---EFLTMLAV 517
+ + GN + + ++ + S V+ EF+
Sbjct: 293 K--SAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCN 350
Query: 518 -CHTVYIELKHRTALASLLGTTNNNYALIIDGL-ALDYALKHELRKDFLELC-------- 567
Y+EL + + L GL + L+ + K+ +E
Sbjct: 351 NYEEKYLELARQGLRVLAFASKELEDDLEFLGLITFEDPLRPDA-KETIEELKAAGIKVV 409
Query: 568 -LT-------------CNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQK 613
+T + RVSP QK ++VE + + GDG ND ++K
Sbjct: 410 MITGDNVLTAKAIAKELGIDVFARVSPEQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKK 468
Query: 614 AHVGVGISGVEGLQAACASDYSIGQFRF-LLKLLFVHGSWNYNRMCLLILYSFYKNICLY 672
A VG+ + A A+D + + G ++ + I ++ N+ L
Sbjct: 469 ADVGIAMG------AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILI 522
Query: 673 VMELWFAIYS 682
+ L +
Sbjct: 523 PLALLLIVII 532
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 2e-54
Identities = 97/235 (41%), Positives = 145/235 (61%), Gaps = 9/235 (3%)
Query: 804 VREFLTMLAVCHTVIPEMKDG-------VLQYHASSPDEKALILGAKAFGYVFTSKHYKE 856
V +F LA C+T++P + D ++ Y SPDE+AL+ A A+G++ +
Sbjct: 532 VHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGH 591
Query: 857 IEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD--SHSK 914
I I GE QR+ +L + EF SDRKRMSVI+ P +KVF KGAD + S +D +
Sbjct: 592 IVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMN 651
Query: 915 YVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMI 974
+ T+ HL ++S G RTL G+ ++ + +++ W ++ A+T++ R + +V +
Sbjct: 652 VIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNV 711
Query: 975 ETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029
E L +LGASA+EDKLQ+ VPE I +L A I VWVLTGDK+ETAI+IGYSS+L+
Sbjct: 712 ENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLL 766
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 2e-46
Identities = 82/417 (19%), Positives = 142/417 (34%), Gaps = 73/417 (17%)
Query: 59 NKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIM-V 117
+ + FL + + + + L + D G +I L++++
Sbjct: 58 GPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDAIVILLVVVINA 117
Query: 118 VSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLM 177
+ G + K A +++ V+R+G +L GDIV + P DL
Sbjct: 118 LLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLR 177
Query: 178 VLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYD 237
+L +S+ ++ L GE+ +QA P + + ++ D+
Sbjct: 178 LLESSDL----EVDESALTGESLPVEKQA--------LPLTKSDAPLGLDRDN------- 218
Query: 238 FTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNATSAPLKRSTV 297
+L G+ + + GIVV TG +++ K A P K+
Sbjct: 219 -------------------MLFSGTTVVSG-RAKGIVVATGFETEFGKIARLLPTKKEVK 258
Query: 298 DKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNN 357
+ + L LL L + A + L R LT + L
Sbjct: 259 TPL-QRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLES---------FLTALALAVA 308
Query: 358 LIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGT 417
+P L + I + A + D + R+ N E LG V + SDKTGT
Sbjct: 309 AVPEGLPAVVTIALALGAQRMAKDNAIV----------RSLNAIETLGSVDVICSDKTGT 358
Query: 418 LTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTV 474
LT+N M K + N + S P + FL A+C++V
Sbjct: 359 LTQNKMTVKKIYI-----------NGGGKDIDDKDLKDS--PALLRFLLAAALCNSV 402
|
Length = 917 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 9e-42
Identities = 77/268 (28%), Positives = 114/268 (42%), Gaps = 41/268 (15%)
Query: 784 VYTVTEQSRMIARNPSIEPVVREFLTMLAVCHTVIPEMKDGVLQYHASSPDEKALILGAK 843
+Y + ++ P + FL A+C++V PE Y A P E AL+ A+
Sbjct: 369 IYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGW---YQAGDPTEGALVEFAE 425
Query: 844 AFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADN 903
G+ G Y IL + F S+RKRMSVIV+T + + +F KGA
Sbjct: 426 KLGFSLDLS----------GLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPE 475
Query: 904 MILSRLDS-------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNA 956
+IL R S + + + +++ AS G R L YK K+
Sbjct: 476 VILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVA--------YKKLDRAEKD- 526
Query: 957 ATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKK 1016
+ + IE+ L LG + +ED +E V E I L +A I VW++TGD
Sbjct: 527 ------------DEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHV 574
Query: 1017 ETAINIGYSSRLVGQDTPLLDLDGYSLD 1044
ETAI I + + L +DG LD
Sbjct: 575 ETAIAIAKECGIEAEAESALVIDGAELD 602
|
Length = 917 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 1e-39
Identities = 69/248 (27%), Positives = 104/248 (41%), Gaps = 16/248 (6%)
Query: 543 ALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIG 602
AL+IDG LD EL + EL + RVSP QKA +VE + + V G
Sbjct: 593 ALVIDGAELDALSDEELAELVEELS------VFARVSPEQKARIVEAL-QKSGHVVAMTG 645
Query: 603 DGANDVAMIQKAHVGVGISGVEGLQAA-CASD-YSIGQFRFLLKLLFVHGSWNYNRMCLL 660
DG ND ++ A VG+ + G EG AA A+D + + L V G Y +
Sbjct: 646 DGVNDAPALKAADVGIAMGG-EGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKF 704
Query: 661 ILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSAR 720
ILY KN+ + L +++++ + + + N+L + P LA+G+ D
Sbjct: 705 ILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED---PES 759
Query: 721 TRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIYGQGTIWANGKDGGYLVL 780
+K P FN KIFW +I S ++F + L+Y G I + L
Sbjct: 760 DVMKRP-PRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQAL 818
Query: 781 GNIVYTVT 788
Sbjct: 819 LQTTAFTV 826
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 4e-27
Identities = 54/218 (24%), Positives = 73/218 (33%), Gaps = 53/218 (24%)
Query: 813 VCHTVIPEMKDGVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILN 872
+ Y + P EKAL+ A+ G + Y IL+
Sbjct: 266 GKEDNSSSLVACDNNYLSGDPMEKALLKSAELVGKAD-------------KGNKEYKILD 312
Query: 873 VLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLDSHSKYVDETKTHLEQFASSGYR 932
V F+S KRMSVIV TP +F KGA IL R + + + A G R
Sbjct: 313 VFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILER-------CNNYEEKYLELARQGLR 365
Query: 933 TLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQE 992
L F ++ ++ L LG ED L+
Sbjct: 366 VLAFASKELEDD---------------------------------LEFLGLITFEDPLRP 392
Query: 993 YVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVG 1030
ETI L A I V ++TGD TA I +
Sbjct: 393 DAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGIDV 430
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 4e-14
Identities = 53/231 (22%), Positives = 85/231 (36%), Gaps = 37/231 (16%)
Query: 802 PVVREFLTMLAVCHTVIPEMK-DGVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIE-- 858
LA CH++ K +G L P +K + +A G+
Sbjct: 488 LKPSITHKALATCHSL---TKLEGKL---VGDPLDKKM---FEATGWTLEEDDESAEPTS 538
Query: 859 ----ITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIK--VFCKGADNMILSRLDSH 912
+ Q I+ +F+S +RMSVIV T +E F KGA I S
Sbjct: 539 ILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTN-DERSPDAFVKGAPETIQSLCSPE 597
Query: 913 SKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCE 972
+ D + L+ + GYR L ++P+ +R+
Sbjct: 598 TVPSDYQEV-LKSYTREGYRVLALAYKELPK---LTLQKAQD------LSRDA------- 640
Query: 973 MIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIG 1023
+E+ L LG E+ L+ E I L +A I ++TGD TA+++
Sbjct: 641 -VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVA 690
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 1e-11
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 16/100 (16%)
Query: 812 AVCHT--VIPEMKDGVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYV 869
A+C+ + + P E AL++ A+ G +E+ RY
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGD-PTESALLVFAEKLGI-----DVEELR-------ARYP 47
Query: 870 ILNVLEFTSDRKRMSVIVRTPQNEIK-VFCKGADNMILSR 908
+ + F S+RKRMS + + ++ +F KGA IL R
Sbjct: 48 RVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 1e-11
Identities = 54/231 (23%), Positives = 87/231 (37%), Gaps = 46/231 (19%)
Query: 804 VREFLTMLAVCHTVIPEMKD-GVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITAL 862
VR L ++ E+ D G + S E AL+ + Y+E+
Sbjct: 419 VRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLL-----RDYQEVR---- 469
Query: 863 GETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMIL----SRLDSHSKYV-- 916
++ + F S+RK MSV+V+ + + F KGA ++L RLDS+ +
Sbjct: 470 ---AEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPI 526
Query: 917 -----DETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVC 971
D +E AS RT+C A E
Sbjct: 527 SDDDKDRCADVIEPLASDALRTICL-------------------AYRDFAPEEFPRK--- 564
Query: 972 EMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINI 1022
+ L L+G ++D L+ V E + +A I+V ++TGD +TA I
Sbjct: 565 DYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAI 615
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 3e-09
Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 32/187 (17%)
Query: 874 LEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLDSHSKYVDETK------------T 921
LEF+ DRK MSV+ P K+F KGA +L R +H D +
Sbjct: 426 LEFSRDRKSMSVLC-KPSTGNKLFVKGAPEGVLERC-THILNGDGRAVPLTDKMKNTILS 483
Query: 922 HLEQFASS-GYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHL 980
+++ ++ R L IP+ + + + IE+ L
Sbjct: 484 VIKEMGTTKALRCLALAFKDIPDPR-----EEDLLSDPANFEA----------IESDLTF 528
Query: 981 LGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLD--L 1038
+G + D + V + I A I V ++TGD KETA I + D +
Sbjct: 529 IGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSF 588
Query: 1039 DGYSLDT 1045
G D
Sbjct: 589 TGREFDE 595
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 1e-08
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 540 NNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTL 599
+ Y L + G A L+ + L L + R++P QK +VEL+ +
Sbjct: 750 SRYHLAMSGKAF-AVLQAHSPELLLRLLSHTT--VFARMAPDQKETLVELLQ-KLDYTVG 805
Query: 600 AIGDGANDVAMIQKAHVGVGISGVEGLQAACASDY 634
GDGAND +++A VG+ +S E A+ A+ +
Sbjct: 806 MCGDGANDCGALKQADVGISLSEAE---ASVAAPF 837
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 5e-07
Identities = 45/224 (20%), Positives = 79/224 (35%), Gaps = 42/224 (18%)
Query: 802 PVVREFLTMLAVCHTVIPEMKDGVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITA 861
V L +C+ + L +P + ALI FG + Y +
Sbjct: 379 VAVSRILEAGNLCNNAKFRNEADTL---LGNPTDVALIELLMKFGLDDLRETYIRVA--- 432
Query: 862 LGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIK-VFCKGADNMILSRLDSHSKYVDETK 920
+ F+S+RK M+V Q+ + F KGA +L + K + K
Sbjct: 433 -----------EVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQK--KDGK 479
Query: 921 THLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIET-KLH 979
T + +++ + A M + R+ E +L
Sbjct: 480 TL-----------------TLTQQQRDV----IQEEAAEMASAGLRVIAFASGPEKGQLT 518
Query: 980 LLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIG 1023
LG + D + V E + LI + + ++TGD +ETA++I
Sbjct: 519 FLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA 562
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 5e-06
Identities = 40/263 (15%), Positives = 84/263 (31%), Gaps = 69/263 (26%)
Query: 112 LILIMVVSGIKEIIEDIKRHLADGEIN----HRSVDVIRNGMIYVEQWKDLKVGDIVKVY 167
++L+++++ + E ++ + A + + VIR+G +L VGDIV +
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 168 NNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIE 227
P D ++ EG ++ L GE+
Sbjct: 62 PGDRVPADGRII-----EGSLEVDESALTGES---------------------------- 88
Query: 228 CDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNA 287
V + G+++ + + IV TG D++L K A
Sbjct: 89 --------------------LPVEKSRGDTVFAGTVVLS-GELKVIVTATGEDTELGKIA 127
Query: 288 TSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSN 347
T Q ++ + + + + A A ++ + R F
Sbjct: 128 RLV---EEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIW--------FFRGGDFLEA 176
Query: 348 LLTFIILYNNLIPISLQVTLEIV 370
LL + + P +L + + +
Sbjct: 177 LLRALAVLVAACPEALPLAVPLA 199
|
Length = 222 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 8e-04
Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 32/158 (20%)
Query: 867 RYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILS-----RLDSHSKYVDETKT 921
R+ ++ + F DR+R+SV+V ++ CKGA +L+ R + E++
Sbjct: 405 RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEK 464
Query: 922 HL-----EQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIET 976
+ G R + + + + + E
Sbjct: 465 SELQDMTAEMNRQGIRVIAVATKTLK-------------VGEADFTKTD---------EE 502
Query: 977 KLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGD 1014
+L + G D +E E IAAL K I+V VLTGD
Sbjct: 503 QLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 0.002
Identities = 77/385 (20%), Positives = 137/385 (35%), Gaps = 76/385 (19%)
Query: 106 YTTLIPLILI-MVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIV 164
Y+ I + + + +I + ++R L D +SV VIRNG +W + ++V
Sbjct: 195 YSLCIVFMSSTSISLSVYQIRKQMQR-LRDMVHKPQSVIVIRNG-----KWVTIASDELV 248
Query: 165 KVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKG 224
PGD++ + E E +++ L G + NE S LT S+ LK
Sbjct: 249 --------PGDIVSIPRPE-EKTMPCDSVLLSGSCIV------NE-SMLTG-ESVPVLKF 291
Query: 225 QIEC---DHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDS 281
I D + F+Y+ + G T + L+ + IVV TG +
Sbjct: 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKI--------LQIRPYPGDTGCLAIVVRTGFST 343
Query: 282 ---KLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLL 338
+L+++ P R + F+L LA+ + TI L+
Sbjct: 344 SKGQLVRSILY-PKPRVFK----FYKDSFKFILFLAVLALIGFIYTI---------IELI 389
Query: 339 SRNPSFHSNLLTFIILYNNLIPISLQVTLEI-VRFIQATFINNDMDMYYEPTDTPAAART 397
+L + + ++P +L L I + A + P A
Sbjct: 390 KDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGI-FCTSPFRINFA--- 445
Query: 398 SNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSI 457
G + DKTGTLT + ++ + N ++ + + PSI
Sbjct: 446 -------GKIDVCCFDKTGTLTEDGLDLRGVQGLSG------NQEFLKIVTEDSSLKPSI 492
Query: 458 EPVVREFLTMLAVCHTVCSVAGNIL 482
LA CH++ + G ++
Sbjct: 493 ------THKALATCHSLTKLEGKLV 511
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|182988 PRK11133, serB, phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.002
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 598 TLAIGDGANDVAMIQKAHVGV 618
T+AIGDGAND+ MI+ A +G+
Sbjct: 267 TVAIGDGANDLPMIKAAGLGI 287
|
Length = 322 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 598 TLAIGDGANDVAMIQKAHVGVGISGVEGLQ 627
T+A+GDGAND++MI+ A +G+ + LQ
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQ 200
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.003
Identities = 41/160 (25%), Positives = 57/160 (35%), Gaps = 26/160 (16%)
Query: 876 FTSDRKRMSVIVRTPQNEI-KVFCKGADNMILSRLDSHSKYVDETKTHLEQ--------- 925
F S+ KRM+ I E ++ KGA I+ S + + LE
Sbjct: 533 FDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIAN 592
Query: 926 ---FASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLG 982
A+ G R L F +K N KN NR E+ L LG
Sbjct: 593 MESLAAEGLRVLAFASKSF--DKADNNDDQLKNET---LNR--------ATAESDLEFLG 639
Query: 983 ASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINI 1022
+ D + + +A I+V +LTGD ETA I
Sbjct: 640 LIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAI 679
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.004
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 571 NAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAA 629
+AV+ RV P K+E+VEL+ + GDG ND ++KA +G+ + SG E A
Sbjct: 607 SAVLFSRVEPSHKSELVELLQ-EQGEIVAMTGDGVNDAPALKKADIGIAMGSGTE--VAK 663
Query: 630 CASDYSIGQFRFLLKLLFVH-GSWNYNRMCLLILYSFYKNI 669
ASD + F + V G YN M I Y NI
Sbjct: 664 EASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNI 704
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1045 | |||
| KOG0206|consensus | 1151 | 100.0 | ||
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210|consensus | 1051 | 100.0 | ||
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202|consensus | 972 | 100.0 | ||
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| KOG0204|consensus | 1034 | 100.0 | ||
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203|consensus | 1019 | 100.0 | ||
| KOG0208|consensus | 1140 | 100.0 | ||
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209|consensus | 1160 | 100.0 | ||
| KOG0207|consensus | 951 | 100.0 | ||
| KOG0205|consensus | 942 | 100.0 | ||
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| KOG0206|consensus | 1151 | 100.0 | ||
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210|consensus | 1051 | 100.0 | ||
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0204|consensus | 1034 | 99.98 | ||
| KOG0202|consensus | 972 | 99.97 | ||
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 99.96 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 99.96 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 99.95 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 99.94 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 99.94 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 99.92 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 99.91 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 99.9 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 99.9 | |
| KOG0203|consensus | 1019 | 99.87 | ||
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 99.87 | |
| KOG0208|consensus | 1140 | 99.78 | ||
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 99.72 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 99.71 | |
| KOG0205|consensus | 942 | 99.68 | ||
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 99.64 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.56 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.46 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 99.46 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 99.19 | |
| KOG0209|consensus | 1160 | 99.14 | ||
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.94 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.89 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.59 | |
| KOG0207|consensus | 951 | 98.5 | ||
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.48 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 98.19 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.06 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.06 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 97.97 | |
| KOG4383|consensus | 1354 | 97.56 | ||
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 97.38 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 97.13 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.07 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 96.9 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 96.69 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 96.47 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 96.08 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 95.94 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 95.82 | |
| KOG1615|consensus | 227 | 95.59 | ||
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 95.48 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 95.4 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 95.29 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 95.29 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 95.17 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 95.08 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 94.85 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 94.77 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 94.69 | |
| PLN02887 | 580 | hydrolase family protein | 94.56 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 94.5 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 94.49 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 94.19 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 93.31 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 93.24 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 93.0 | |
| PLN02954 | 224 | phosphoserine phosphatase | 92.94 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 92.17 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 91.7 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 91.43 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 91.32 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 90.98 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 90.28 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 89.54 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 89.42 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 89.01 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 88.82 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 88.66 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 88.24 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 88.1 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 87.23 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 86.52 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 85.64 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 84.81 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 84.75 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 84.47 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 82.78 | |
| PRK08238 | 479 | hypothetical protein; Validated | 82.65 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 82.61 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 81.93 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 81.73 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 80.73 |
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-136 Score=1232.17 Aligned_cols=769 Identities=49% Similarity=0.831 Sum_probs=683.7
Q ss_pred CCCCceEEEeCCCCC-----CCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHH
Q psy15803 39 GKADHRVININAPQS-----CKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLI 113 (1045)
Q Consensus 39 ~~~~~r~~~~~~~~~-----~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~ 113 (1045)
.+..+|.++.|++.+ .+|++|+|+|+|||+++|||++||+||+|++|+|||++++++++| ++|.+++++++||+
T Consensus 10 ~~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~ 88 (1151)
T KOG0206|consen 10 RPGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLL 88 (1151)
T ss_pred cCCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeecee
Confidence 457789999999843 389999999999999999999999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcccEEEEEECCe-EEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEe
Q psy15803 114 LIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGM-IYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIET 192 (1045)
Q Consensus 114 ~i~~i~~i~~~~~~~~~~~~~~~~n~~~~~V~r~g~-~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vde 192 (1045)
+++.++++||++||++|++.|+++|+++++|++++. +++..|++|+|||+|+++.+|.+|||.+||++|+++|.|||+|
T Consensus 89 ~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT 168 (1151)
T KOG0206|consen 89 FVLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVET 168 (1151)
T ss_pred eeehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEE
Confidence 999999999999999999999999999999999644 8999999999999999999999999999999999999999999
Q ss_pred ecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEE
Q psy15803 193 MNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIG 272 (1045)
Q Consensus 193 s~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~ 272 (1045)
++||||+++|.|++...+....+.....++++.++||.||+++|.|.|++...+... |++++|+++|||+|+||+|++|
T Consensus 169 ~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~-pl~~~~~Llrg~~lrNT~~v~G 247 (1151)
T KOG0206|consen 169 ANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIY-PLSPDNLLLRGSRLRNTEWVYG 247 (1151)
T ss_pred eecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCC-CCcHHHcccCCceeccCcEEEE
Confidence 999999999999998877664456678889999999999999999999999777633 9999999999999999999999
Q ss_pred EEEEecCcchhhhhccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC---CCccccCCC--chhhhH
Q psy15803 273 IVVYTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNA---GDWYLLSRN--PSFHSN 347 (1045)
Q Consensus 273 iV~~tG~~T~~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~---~~~~~~~~~--~~~~~~ 347 (1045)
+|++||++||+++|...++.|++++++.+|+.+..++++++++|+++++...+|...... ..||+.... ......
T Consensus 248 ~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (1151)
T KOG0206|consen 248 VVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVH 327 (1151)
T ss_pred EEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998775422 356665442 245678
Q ss_pred HHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEE
Q psy15803 348 LLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKI 427 (1045)
Q Consensus 348 ~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~ 427 (1045)
|+.++++++.++|+||++++++++.+++.++++|.+||+++.+.++.+|+++++|+||||+||++|||||||+|.|+|++
T Consensus 328 f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~k 407 (1151)
T KOG0206|consen 328 FLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKK 407 (1151)
T ss_pred HHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCccccCCCCCch-------------------hHhhhhhh----cCCCCchHHHHHHHHHHhhceeeeecC-Cc---
Q psy15803 428 CSVAGNILVPNFNSNN-------------------VQEQSRMI----ARNPSIEPVVREFLTMLAVCHTVCSVA-GN--- 480 (1045)
Q Consensus 428 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~----~~~~~~~~~~~~~~~~l~~c~~v~~~~-~~--- 480 (1045)
|+++|..|+....... ........ ..++ ..+...+|++++++||++.++. ++
T Consensus 408 Csi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~-~~~~~~~f~~~la~chtv~~e~~~~~~~ 486 (1151)
T KOG0206|consen 408 CSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEP-QAEDILEFFRALALCHTVIPEKDEDSGK 486 (1151)
T ss_pred ccccCcccccCCChhhcccCccccccccccccccceeccchhhcccccccc-CcchHHHHhhHHhccceeeeccCCCccc
Confidence 9999999987433210 00010111 1111 2567789999999999999887 21
Q ss_pred e---------------------------------------------eecccCCCCcccceEEEEecCCCC---------c
Q psy15803 481 I---------------------------------------------LVPNFNSNNVKEQSRMIARNPSIE---------P 506 (1045)
Q Consensus 481 ~---------------------------------------------l~~~f~~~~~~~~~svi~~~~~~~---------~ 506 (1045)
+ -+++|+|.| ||||||++.|.|. +
T Consensus 487 ~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~R--KRMSVIVR~p~g~i~LycKGADs 564 (1151)
T KOG0206|consen 487 LSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTR--KRMSVIVRDPDGRILLYCKGADS 564 (1151)
T ss_pred eeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEecccccc--ceeEEEEEcCCCcEEEEEcCcch
Confidence 1 078999999 9999999999864 2
Q ss_pred hhH-------------------HHH----HHHHHH-----HHHhhh-----------hhhHHH-----------HHHHcC
Q psy15803 507 VVR-------------------EFL----TMLAVC-----HTVYIE-----------LKHRTA-----------LASLLG 536 (1045)
Q Consensus 507 ~~~-------------------~~~----~ti~~~-----~~~~~~-----------~~~~~~-----------~~~~lG 536 (1045)
+++ +++ ||++.. +++|.+ +.+|++ .+.++|
T Consensus 565 vI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 565 VIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred hhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 222 233 564333 344433 222321 133444
Q ss_pred -------------------------------------------------------C-C-C--------------------
Q psy15803 537 -------------------------------------------------------T-T-N-------------------- 539 (1045)
Q Consensus 537 -------------------------------------------------------~-~-~-------------------- 539 (1045)
+ . .
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 0 0 0
Q ss_pred --------------CCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCc
Q psy15803 540 --------------NNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGA 605 (1045)
Q Consensus 540 --------------~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ 605 (1045)
++.++||||+++..+++.+.+..|++++..|++|+|||+||.||+.+|+++++..+.+|++||||+
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 157899999999999999889999999999999999999999999999999988899999999999
Q ss_pred cChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCC
Q psy15803 606 NDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWS 685 (1045)
Q Consensus 606 ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s 685 (1045)
||++|||+|||||||+|.||+||++++||++++|++|.+|||+||||+|.|+++++.|+||||+++++++|||.|++|||
T Consensus 805 NDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfS 884 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFS 884 (1151)
T ss_pred ccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCccc--ccccCcccHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy15803 686 GQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILY--SQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIY 763 (1045)
Q Consensus 686 ~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly--~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~~ 763 (1045)
||++|++|++.+||++||++|++++|+||||++++.++++|+|| ++++..|++++||.|+++|+|||+++||+++..+
T Consensus 885 gq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~ 964 (1151)
T KOG0206|consen 885 GQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVF 964 (1151)
T ss_pred CCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhh
Confidence 99999999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred cCcccccCCccccceeeeEEEEE-----Eeeeeee----------eeecCCCcchhhhhhhhhcc
Q psy15803 764 GQGTIWANGKDGGYLVLGNIVYT-----VTEQSRM----------IARNPSIEPVVREFLTMLAV 813 (1045)
Q Consensus 764 ~~~~~~~ng~~~d~~~~g~~v~t-----V~~k~~~----------~~~~~s~~~~~~~~l~~~sl 813 (1045)
.......+|.+.|++.+|..++| |+.+..+ +.+|+|+..|+ .++..++.
T Consensus 965 ~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f-~f~~iy~~ 1028 (1151)
T KOG0206|consen 965 EEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWF-VFLFIYSE 1028 (1151)
T ss_pred eeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHH-HHHHHHhc
Confidence 88788899999999999998888 6677655 66788998888 55555543
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-133 Score=1253.11 Aligned_cols=722 Identities=39% Similarity=0.695 Sum_probs=622.0
Q ss_pred CCCceEEEeCCCC----CCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHH
Q psy15803 40 KADHRVININAPQ----SCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILI 115 (1045)
Q Consensus 40 ~~~~r~~~~~~~~----~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i 115 (1045)
.++.|.|++|++. +.+|++|+|+|+|||+|+|||++||+||+|++|+|||+++++|++|.+++.+++++++||+++
T Consensus 67 ~~~~r~i~~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~v 146 (1178)
T PLN03190 67 DEDARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFV 146 (1178)
T ss_pred cCCceEEEcCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHH
Confidence 4678999999872 346999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecC
Q psy15803 116 MVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNL 195 (1045)
Q Consensus 116 ~~i~~i~~~~~~~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~L 195 (1045)
++++++++++||++|+++|++.|+++++|+|+|++++++|++|+|||+|+|++||.||||++||++++++|.|+||||+|
T Consensus 147 l~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~L 226 (1178)
T PLN03190 147 LLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINL 226 (1178)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEE
Q psy15803 196 DGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVV 275 (1045)
Q Consensus 196 tGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~ 275 (1045)
||||+||.|.+++.+... ..+..++.+.++||.||+++|.|.|++..+|. ..+++.+|+++|||.|+||+|++|+|+
T Consensus 227 dGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~-~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 227 DGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGK-RLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred CCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCC-cccCCccceeeccceecCCceEEEEEE
Confidence 999999999987654321 12335678999999999999999999999887 679999999999999999999999999
Q ss_pred EecCcchhhhhccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCC---------C-----
Q psy15803 276 YTGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSR---------N----- 341 (1045)
Q Consensus 276 ~tG~~T~~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~---------~----- 341 (1045)
|||+|||+++|...++.|++++|+.+|+++.+++++++++|++++++..+|........||+... .
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999988877765333334443221 0
Q ss_pred ----chhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCc
Q psy15803 342 ----PSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGT 417 (1045)
Q Consensus 342 ----~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGT 417 (1045)
...+..|+.+++++..+||++|++++++++.+++.+|++|.+||++..+.++.+|+++++|+||+|+|||+|||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 0124557777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEEEEEEcCccccCCCCCch--------------------hHhhhhhh----cC-CCCchHHHHHHHHHHhhce
Q psy15803 418 LTRNVMEFKICSVAGNILVPNFNSNN--------------------VQEQSRMI----AR-NPSIEPVVREFLTMLAVCH 472 (1045)
Q Consensus 418 LT~n~m~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~----~~-~~~~~~~~~~~~~~l~~c~ 472 (1045)
||+|+|+|++|+++|..|+.+..... ......+. .+ .....+.+.+|+.++++||
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCh 543 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcC
Confidence 99999999999999988864210000 00000000 00 1111234678999999999
Q ss_pred eeeec---C----------------Cce-----------------------------------eecccCCCCcccceEEE
Q psy15803 473 TVCSV---A----------------GNI-----------------------------------LVPNFNSNNVKEQSRMI 498 (1045)
Q Consensus 473 ~v~~~---~----------------~~~-----------------------------------l~~~f~~~~~~~~~svi 498 (1045)
++.+. . ++. -.+||+|+| ||||++
T Consensus 544 tv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~r--KrMSvI 621 (1178)
T PLN03190 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDR--KRMSVI 621 (1178)
T ss_pred CceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccc--cEEEEE
Confidence 99762 1 110 067999999 999999
Q ss_pred EecCCCC---------ch-------------hH-------HH--------------------------------------
Q psy15803 499 ARNPSIE---------PV-------------VR-------EF-------------------------------------- 511 (1045)
Q Consensus 499 ~~~~~~~---------~~-------------~~-------~~-------------------------------------- 511 (1045)
++.+.+. .. +. ++
T Consensus 622 v~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~ 701 (1178)
T PLN03190 622 LGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRA 701 (1178)
T ss_pred EEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhH
Confidence 9876532 00 00 01
Q ss_pred ------------------------------HHHHHHHHHHhhhhhhHH--------HHHHHcCCC---------------
Q psy15803 512 ------------------------------LTMLAVCHTVYIELKHRT--------ALASLLGTT--------------- 538 (1045)
Q Consensus 512 ------------------------------~~ti~~~~~~~~~~~~~~--------~~~~~lG~~--------------- 538 (1045)
+++++.++++|+++.|.| ++|+.+|+-
T Consensus 702 ~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~ 781 (1178)
T PLN03190 702 ALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKE 781 (1178)
T ss_pred HHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchh
Confidence 112222222232222221 223323211
Q ss_pred ---------------------------------CCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHH
Q psy15803 539 ---------------------------------NNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAE 585 (1045)
Q Consensus 539 ---------------------------------~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~ 585 (1045)
..+.+++++|++++.+++.++++.|.+++.+|++|||||+||+||++
T Consensus 782 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~ 861 (1178)
T PLN03190 782 SCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAG 861 (1178)
T ss_pred hHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHH
Confidence 01235899999999999888888999999999999999999999999
Q ss_pred HHHHHHhcCCCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheee
Q psy15803 586 VVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSF 665 (1045)
Q Consensus 586 iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~ 665 (1045)
+|+.+|+.++++|+|||||+||++|||+|||||||+|+||.||+.++||++++|++|.+|||+||||+|+|+++++.|+|
T Consensus 862 IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~f 941 (1178)
T PLN03190 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNF 941 (1178)
T ss_pred HHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999998678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCccc--ccccCcccHHHHHH
Q psy15803 666 YKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILY--SQTANTFNVKIFWI 743 (1045)
Q Consensus 666 ~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly--~~~~~~~~~~~f~~ 743 (1045)
|||+++++++|||+++++||||++|++|.+++||++||++|++++|+||+|++++.++++|+|| ++.+..+|.+.||.
T Consensus 942 YKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~ 1021 (1178)
T PLN03190 942 YRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWL 1021 (1178)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 78889999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCc
Q psy15803 744 WIGNALFHSMLMFWIPMLIYGQG 766 (1045)
Q Consensus 744 ~~~~~~~~s~~~~~~~~~~~~~~ 766 (1045)
|++.|+|||+++||++++.+...
T Consensus 1022 w~~~~i~qs~iiff~~~~~~~~~ 1044 (1178)
T PLN03190 1022 TMIDTLWQSAVVFFVPLFAYWAS 1044 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999887653
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-120 Score=1151.69 Aligned_cols=728 Identities=49% Similarity=0.850 Sum_probs=635.0
Q ss_pred CCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q psy15803 56 FVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADG 135 (1045)
Q Consensus 56 ~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~ 135 (1045)
|++|+|+|+|||+|+|+|++||+||++++|+|||+++++|++|.+++.+++++++||+++++++++++++||++|+++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccEEEEEEC-CeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCCCCCCCC
Q psy15803 136 EINHRSVDVIRN-GMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLT 214 (1045)
Q Consensus 136 ~~n~~~~~V~r~-g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~ 214 (1045)
+.|+++++|+|+ |++++++|+||+|||+|.|++||.||||++||++++++|.|+||||+|||||+||.|++...+....
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999997 8999999999999999999999999999999999999999999999999999999999876654444
Q ss_pred CcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhccCCCCCC
Q psy15803 215 DPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNATSAPLKR 294 (1045)
Q Consensus 215 ~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~~~~~k~ 294 (1045)
....+.+++|.++|+.||+++|.|.|++..++....|++.+|+++|||.++||+|++|+|+|||++|+++++...++.|+
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k~ 240 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcccc
Confidence 45566778999999999999999999999988557899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCC------CchhhhHHHHHHHHhhccccchhhhhHH
Q psy15803 295 STVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSR------NPSFHSNLLTFIILYNNLIPISLQVTLE 368 (1045)
Q Consensus 295 s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~ll~~~iP~~L~v~~~ 368 (1045)
+++++.+|+++.+++.+++++|++++++..+|........||+... ...+...+++++++++.++|++|+++++
T Consensus 241 s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~ 320 (1057)
T TIGR01652 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLE 320 (1057)
T ss_pred cHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHH
Confidence 9999999999999999999999999888777764433447886422 1235568889999999999999999999
Q ss_pred HHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCch--hHh
Q psy15803 369 IVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNN--VQE 446 (1045)
Q Consensus 369 ~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~--~~~ 446 (1045)
+++.+++.+++||.+|+++..++++.+|+++++|+||+|++||+|||||||+|+|+|++|+++|..|+.+..... ..+
T Consensus 321 l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~ 400 (1057)
T TIGR01652 321 LVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRE 400 (1057)
T ss_pred HHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhh
Confidence 999999999999999998877889999999999999999999999999999999999999999988864321100 000
Q ss_pred h----------------------hh----hhcCCCCchHHHHHHHHHHhhceeeeecC--C-------------ce----
Q psy15803 447 Q----------------------SR----MIARNPSIEPVVREFLTMLAVCHTVCSVA--G-------------NI---- 481 (1045)
Q Consensus 447 ~----------------------~~----~~~~~~~~~~~~~~~~~~l~~c~~v~~~~--~-------------~~---- 481 (1045)
. .. ....++. ++...+|+.++++||++.+.. + +.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~ 479 (1057)
T TIGR01652 401 RLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPN-AKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVK 479 (1057)
T ss_pred cccccccccccccccccccccCcHHHHHhhhcCCch-hHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHH
Confidence 0 00 0001111 345678999999999986541 0 00
Q ss_pred ---------------------------------eecccCCCCcccceEEEEecCCCC---------c------------h
Q psy15803 482 ---------------------------------LVPNFNSNNVKEQSRMIARNPSIE---------P------------V 507 (1045)
Q Consensus 482 ---------------------------------l~~~f~~~~~~~~~svi~~~~~~~---------~------------~ 507 (1045)
-.+||+++| |||+++++.+.+. . .
T Consensus 480 ~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~r--KrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~ 557 (1057)
T TIGR01652 480 AARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDR--KRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQV 557 (1057)
T ss_pred HHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCC--CeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhH
Confidence 046899999 9999999875432 0 0
Q ss_pred hH---------------------------------------------------------------------------HHH
Q psy15803 508 VR---------------------------------------------------------------------------EFL 512 (1045)
Q Consensus 508 ~~---------------------------------------------------------------------------~~~ 512 (1045)
+. +.+
T Consensus 558 ~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~ 637 (1057)
T TIGR01652 558 NEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVP 637 (1057)
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccH
Confidence 00 111
Q ss_pred HHHHHHHHHhhhhhhHH--------HHHHHcCCCCC----------------------------------------CceE
Q psy15803 513 TMLAVCHTVYIELKHRT--------ALASLLGTTNN----------------------------------------NYAL 544 (1045)
Q Consensus 513 ~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~----------------------------------------~~~~ 544 (1045)
++|+.++++|+++.|.| ++|+.+|+... +.++
T Consensus 638 etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l 717 (1057)
T TIGR01652 638 ETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVAL 717 (1057)
T ss_pred HHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEE
Confidence 23444444454444443 33666664322 1247
Q ss_pred EEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCch
Q psy15803 545 IIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVE 624 (1045)
Q Consensus 545 vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e 624 (1045)
+++|++++.+++++++..|.+++..|+++||||++|+||+++|+.+|+..|++|+|||||+||+|||++||||||++|+|
T Consensus 718 vi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~e 797 (1057)
T TIGR01652 718 VIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKE 797 (1057)
T ss_pred EEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChH
Confidence 99999999988888888899999999999999999999999999999987899999999999999999999999999999
Q ss_pred hhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhh
Q psy15803 625 GLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTA 704 (1045)
Q Consensus 625 ~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~ 704 (1045)
+.||+.++|++..+|++|.++|++|||++|+|+++++.|.||||++++++++||+++++|+|+++|++++++|||+++|+
T Consensus 798 g~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~ 877 (1057)
T TIGR01652 798 GMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTA 877 (1057)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccCChhhhhcCCccc--ccccCcccHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccCCccccceeeeE
Q psy15803 705 FPPLAIGILDQVCSARTRLKYPILY--SQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIYGQGTIWANGKDGGYLVLGN 782 (1045)
Q Consensus 705 ~p~~~~~~~~~d~~~~~~~~~p~ly--~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ng~~~d~~~~g~ 782 (1045)
+|++++|++|+|++++.++++|++| ++.++.++.+.|+.|++.|+|||+++|+++++.+.......+|...|++.+|.
T Consensus 878 lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~ 957 (1057)
T TIGR01652 878 LPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGV 957 (1057)
T ss_pred HHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHH
Confidence 9999999999999999999999999 77889999999999999999999999999999988655456788888888887
Q ss_pred EEEE
Q psy15803 783 IVYT 786 (1045)
Q Consensus 783 ~v~t 786 (1045)
.+|+
T Consensus 958 ~~~~ 961 (1057)
T TIGR01652 958 IVFT 961 (1057)
T ss_pred HHHH
Confidence 7766
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-105 Score=879.31 Aligned_cols=695 Identities=31% Similarity=0.541 Sum_probs=600.4
Q ss_pred CceEEEeCC---CCCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHH
Q psy15803 42 DHRVININA---PQSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVV 118 (1045)
Q Consensus 42 ~~r~~~~~~---~~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i 118 (1045)
..|++.+.. ..+.+|++|.++..||++++|+|..|++||+.+.|+|||++++.|++|.+......++..|+.|++.+
T Consensus 62 ~~rt~~~~~~~~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~i 141 (1051)
T KOG0210|consen 62 HGRTVNISFGPHYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTI 141 (1051)
T ss_pred cCceeecccCCCcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHH
Confidence 346665555 47789999999999999999999999999999999999999999999998877888999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccEEEEE-ECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCc
Q psy15803 119 SGIKEIIEDIKRHLADGEINHRSVDVI-RNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDG 197 (1045)
Q Consensus 119 ~~i~~~~~~~~~~~~~~~~n~~~~~V~-r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtG 197 (1045)
++++++++|.+|++.|++.|+.+++++ |+|.... ++++|+|||+|.++.|++||||++||++|+.+|.|+|.|..|||
T Consensus 142 tl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDG 220 (1051)
T KOG0210|consen 142 TLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDG 220 (1051)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCC
Confidence 999999999999999999999999988 6665444 99999999999999999999999999999999999999999999
Q ss_pred ccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCC-ccccCCccceeeccceeecCcEEEEEEEE
Q psy15803 198 ETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGR-TAVPLGPERILLRGSMLRNTAWIIGIVVY 276 (1045)
Q Consensus 198 Es~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~-~~~~l~~~n~l~~G~~l~nt~~~~~iV~~ 276 (1045)
||++|.|-|.+.++......++..++ +..|.|+++.+.|-|++.++.. ..++++.+|.++.++.+..+. ++|+|+|
T Consensus 221 ETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t-~~gvVvY 297 (1051)
T KOG0210|consen 221 ETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGT-AIGVVVY 297 (1051)
T ss_pred cccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCc-EEEEEEE
Confidence 99999999999999988877777666 8999999999999999999764 457999999999999999888 8999999
Q ss_pred ecCcchhhhhccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhh
Q psy15803 277 TGPDSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYN 356 (1045)
Q Consensus 277 tG~~T~~~~~~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~ 356 (1045)
||.||+..+|...++.|-..++..+|.+.++++.++++++++......+ ...||. .+++++.+++
T Consensus 298 TG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~------~~~wyi---------~~~RfllLFS 362 (1051)
T KOG0210|consen 298 TGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF------GSDWYI---------YIIRFLLLFS 362 (1051)
T ss_pred ecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC------CCchHH---------HHHHHHHHHh
Confidence 9999999999999999999999999999999999999888876554332 245765 8999999999
Q ss_pred ccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCcccc
Q psy15803 357 NLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILV 436 (1045)
Q Consensus 357 ~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~ 436 (1045)
.+||++|.+.+++++...++.++.|..+ .+.++|++++.|+||+|+|+.+|||||||||+|+|++++.+...|+
T Consensus 363 ~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s 436 (1051)
T KOG0210|consen 363 SIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYS 436 (1051)
T ss_pred hhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeecc
Confidence 9999999999999999999999998755 6899999999999999999999999999999999999999888776
Q ss_pred CCCCCchhHhhhhhh------------cCCCCchHHHHHHHHHHhhceeeeecCC---ce--------------------
Q psy15803 437 PNFNSNNVQEQSRMI------------ARNPSIEPVVREFLTMLAVCHTVCSVAG---NI-------------------- 481 (1045)
Q Consensus 437 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~c~~v~~~~~---~~-------------------- 481 (1045)
.+..+.--.....+. ....+.+..+++...++++||.|.+..+ ++
T Consensus 437 ~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VG 516 (1051)
T KOG0210|consen 437 AETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVG 516 (1051)
T ss_pred HhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecc
Confidence 533221100000000 0011124667888999999999987542 11
Q ss_pred --------------------------eecccCCCCcccceEEEEecCCCC----------chhH--------------HH
Q psy15803 482 --------------------------LVPNFNSNNVKEQSRMIARNPSIE----------PVVR--------------EF 511 (1045)
Q Consensus 482 --------------------------l~~~f~~~~~~~~~svi~~~~~~~----------~~~~--------------~~ 511 (1045)
-++||+|+. |||.+|++++..+ .+.. ++
T Consensus 517 l~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEt--KRMGIIVr~e~~~evtfylKGAD~VMs~iVq~NdWleEE~gNM 594 (1051)
T KOG0210|consen 517 LKLAKRDRHAITLRVPLDDELNYQILQVFPFTSET--KRMGIIVRDETTEEVTFYLKGADVVMSGIVQYNDWLEEECGNM 594 (1051)
T ss_pred eEEeecccceEEEecCCCcceeEEEEEEecccccc--ceeeEEEecCCCceEEEEEecchHHHhcccccchhhhhhhhhh
Confidence 078999999 9999999988432 1111 11
Q ss_pred H---------------------------------------------------------------------HHHHHHHHHh
Q psy15803 512 L---------------------------------------------------------------------TMLAVCHTVY 522 (1045)
Q Consensus 512 ~---------------------------------------------------------------------~ti~~~~~~~ 522 (1045)
+ -|+..++++|
T Consensus 595 AREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAg 674 (1051)
T KOG0210|consen 595 AREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAG 674 (1051)
T ss_pred hhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcC
Confidence 1 1122222333
Q ss_pred hhhhhHHH------H--H---HHcC------------------------CCCCCceEEEechhhHHHhhHHHHHHHHHHh
Q psy15803 523 IELKHRTA------L--A---SLLG------------------------TTNNNYALIIDGLALDYALKHELRKDFLELC 567 (1045)
Q Consensus 523 ~~~~~~~~------~--~---~~lG------------------------~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~ 567 (1045)
+++.|.|. + | ++.+ ....+.+++|+|++++..+. ..++.|.+++
T Consensus 675 ikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~ 753 (1051)
T KOG0210|consen 675 IKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLK-YYEDEFIELV 753 (1051)
T ss_pred cEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHH-HHHHHHHHHH
Confidence 33222220 0 0 0000 23456799999999999886 4677899999
Q ss_pred hcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHH
Q psy15803 568 LTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLF 647 (1045)
Q Consensus 568 ~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll 647 (1045)
..|.+||||||+|.||+++|+.+|+.+|+.|++||||.||+.|||+|||||||.|.||.||+-++||++.+|+++.+|||
T Consensus 754 ~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 754 CELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred HhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCc
Q psy15803 648 VHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPI 727 (1045)
Q Consensus 648 ~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ 727 (1045)
+|||.+|+|.+++.+|.+.+.++.+.+|..|+...-|.+.++|.++.|..|..++|++|++.+ +.|+|++++..+.||+
T Consensus 834 ~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPE 912 (1051)
T KOG0210|consen 834 WHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPE 912 (1051)
T ss_pred ccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHH
Confidence 999999999999999999999999999999999999999999999999999999999999998 7899999999999999
Q ss_pred cc--ccccCcccHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q psy15803 728 LY--SQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIYGQ 765 (1045)
Q Consensus 728 ly--~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~~~~ 765 (1045)
|| ..+++.+++++|+.|++.++||+.++.++.++.+..
T Consensus 913 LYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~ 952 (1051)
T KOG0210|consen 913 LYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT 952 (1051)
T ss_pred HHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh
Confidence 99 677899999999999999999999998887776654
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-87 Score=833.22 Aligned_cols=615 Identities=26% Similarity=0.350 Sum_probs=510.0
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCc----chhhhHHHHHHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRY----TTLIPLILIMVVSGIKEIIED 127 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~----~~~~~l~~i~~i~~i~~~~~~ 127 (1045)
+..+||.|.+...|-.. +++.++.||+++++..++++++++++. +.| .....++++++++++..++|+
T Consensus 53 r~~~~G~N~~~~~~~~~---~~~~fl~~f~~~~~~iL~~~a~~s~~~-----~~~~~~~~~~~~I~~~i~~n~~~g~~qe 124 (917)
T COG0474 53 RLKKYGPNELPEEKKRS---LLKKFLRQFKDPFIILLLVAALLSAFV-----GDWVDAGVDAIVILLVVVINALLGFVQE 124 (917)
T ss_pred HHhhcCCccccccccCc---HHHHHHHHHHHHHHHHHHHHHHHHHHh-----hcccccCcceeeehHHHHHHHHHHHHHH
Confidence 35679999999666543 346678899999999999999988773 333 455566777777777778888
Q ss_pred HHHhhh---hhhhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEee
Q psy15803 128 IKRHLA---DGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVR 204 (1045)
Q Consensus 128 ~~~~~~---~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K 204 (1045)
+++.++ ++++.+.+++|+|||++++|+++||+|||||++++||.||||++|+++++ .+||||+|||||+|+.|
T Consensus 125 ~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 125 YRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 888655 45667788999999999999999999999999999999999999999885 58999999999999999
Q ss_pred cCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhh
Q psy15803 205 QAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLM 284 (1045)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~ 284 (1045)
.+...... +.|. .++..|++++||.++++. +.|+|++||.+|++|
T Consensus 201 ~~~~~~~~----------------~~~~------------------~~d~~n~l~sGt~V~~G~-~~giVvaTG~~T~~G 245 (917)
T COG0474 201 QALPLTKS----------------DAPL------------------GLDRDNMLFSGTTVVSGR-AKGIVVATGFETEFG 245 (917)
T ss_pred cccccccc----------------cccc------------------cCCccceEEeCCEEEcce-EEEEEEEEcCccHHH
Confidence 88654310 0000 034567777777777777 899999999999999
Q ss_pred hhccCCC---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccc
Q psy15803 285 KNATSAP---LKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPI 361 (1045)
Q Consensus 285 ~~~~~~~---~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~ 361 (1045)
+++.... ...+++++.++++..+++.+.++++++.++...+... .++...++.++++++.++|+
T Consensus 246 ~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~v~l~va~IPe 312 (917)
T COG0474 246 KIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGG-------------NGLLESFLTALALAVAAVPE 312 (917)
T ss_pred HHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------ccHHHHHHHHHHHHHhcccc
Confidence 9998433 4679999999999999999999999988887733211 11456899999999999999
Q ss_pred hhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCC
Q psy15803 362 SLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNS 441 (1045)
Q Consensus 362 ~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~ 441 (1045)
+||+.+++++++++.+| +++++++|+++++|+||++++||||||||||||+|+|++|++.+. ..+..+
T Consensus 313 gLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~--~~~~~~ 380 (917)
T COG0474 313 GLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG--GKDIDD 380 (917)
T ss_pred chHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--cccccc
Confidence 99999999999999999 788999999999999999999999999999999999999998851 101000
Q ss_pred chhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeec------CCc----------------------------eeecccC
Q psy15803 442 NNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSV------AGN----------------------------ILVPNFN 487 (1045)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~------~~~----------------------------~l~~~f~ 487 (1045)
... ...+...+++..+++||+.... .+. +-.+||+
T Consensus 381 ----------~~~-~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFd 449 (917)
T COG0474 381 ----------KDL-KDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFD 449 (917)
T ss_pred ----------ccc-ccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCC
Confidence 000 0123344677778888866654 110 1158999
Q ss_pred CCCcccceEEEEecCCC---------------------------------------------------------------
Q psy15803 488 SNNVKEQSRMIARNPSI--------------------------------------------------------------- 504 (1045)
Q Consensus 488 ~~~~~~~~svi~~~~~~--------------------------------------------------------------- 504 (1045)
|+| |||+++++...+
T Consensus 450 S~r--KrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~ 527 (917)
T COG0474 450 SER--KRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD 527 (917)
T ss_pred CCc--eEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc
Confidence 999 999999973221
Q ss_pred ------------------CchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCc-eEEEechhhHHHhhH
Q psy15803 505 ------------------EPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNNY-ALIIDGLALDYALKH 557 (1045)
Q Consensus 505 ------------------~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~-~~vi~G~~l~~~~~~ 557 (1045)
||+|++.+++|+.|+++|+++.|+| ++++.+|+..+.. .++++|++++.+.++
T Consensus 528 ~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~ 607 (917)
T COG0474 528 EVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDE 607 (917)
T ss_pred hhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHH
Confidence 1555577788999999999988877 6699999887665 789999999999988
Q ss_pred HHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc--cCchhhhhhhccccc
Q psy15803 558 ELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI--SGVEGLQAACASDYS 635 (1045)
Q Consensus 558 ~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi--~g~e~a~~a~~~~~~ 635 (1045)
++.+.+.+. + ||||+||+||.++|+.+|++ |++|+|+|||+|||||||+||||||+ +|+|++++|+|+++.
T Consensus 608 el~~~~~~~----~--VfARvsP~qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~ 680 (917)
T COG0474 608 ELAELVEEL----S--VFARVSPEQKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLL 680 (917)
T ss_pred HHHHHhhhC----c--EEEEcCHHHHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEee
Confidence 766666553 3 99999999999999999999 99999999999999999999999966 589999999999999
Q ss_pred cchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccc
Q psy15803 636 IGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQ 715 (1045)
Q Consensus 636 ~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~ 715 (1045)
+++|..+..++ +|||++|.|+++++.|.+++|+..++.++++.+++.+ ..||.++|++|+|++++++|++++|+++
T Consensus 681 dd~~~~i~~av-~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~- 756 (917)
T COG0474 681 DDNFATIVLAV-VEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED- 756 (917)
T ss_pred cCcHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC-
Confidence 99999999999 9999999999999999999999999999999999888 7899999999999999999999999988
Q ss_pred cCChhhhhcCCcccccccCcccHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q psy15803 716 VCSARTRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIYGQ 765 (1045)
Q Consensus 716 d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~~~~ 765 (1045)
++...|++|+ .+....+|+.+.|++|++...+++.++++..|..+..
T Consensus 757 --~~~~~m~~~~-~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~ 803 (917)
T COG0474 757 --PESDVMKRPP-RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLL 803 (917)
T ss_pred --CcccccccCC-CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666662 2577889999999999999999999998888777654
|
|
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-87 Score=758.17 Aligned_cols=630 Identities=19% Similarity=0.242 Sum_probs=515.4
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHh
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH 131 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~ 131 (1045)
+++.||.|++....-.. +++.+++||.++...++|++++++++ ..+|.+.+.+.+++++.+...++|++++.
T Consensus 32 r~~~yG~Nel~~ee~~~---~wk~vLeQF~n~Li~iLL~sA~ISfv-----l~~~~e~~vI~liiv~nvtVG~~QEy~aE 103 (972)
T KOG0202|consen 32 RRKKYGENELPAEEGES---LWKLVLEQFDNPLILILLLSAAISFV-----LADFDEPFVITLIIVINVTVGFVQEYNAE 103 (972)
T ss_pred HHHhcCCccCccccCCc---HHHHHHHHHHhHHHHHHHHHHHHHHH-----HHhcccceeeeeeeeeeeeeeeeeehhhH
Confidence 35789999999766555 67888999999999999999999999 67788999999999999999999999999
Q ss_pred hhhhhhc---ccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCC
Q psy15803 132 LADGEIN---HRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208 (1045)
Q Consensus 132 ~~~~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~ 208 (1045)
++.++++ +..++|+|+|+.+.++++||||||||.++-||+||||++|++..+ ..||||+|||||.|+.|....
T Consensus 104 kalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~t~~ 179 (972)
T KOG0202|consen 104 KALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKDTDA 179 (972)
T ss_pred HHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccccCcc
Confidence 9886664 567999999999999999999999999999999999999999887 889999999999999997643
Q ss_pred CC----CCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhh
Q psy15803 209 ET----SSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLM 284 (1045)
Q Consensus 209 ~~----~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~ 284 (1045)
.. ....+.+++. |+||.+..|. +.|+|+.||.+|.+|
T Consensus 180 v~~~~~~~~~dk~Nia-----------------FsGT~V~~G~----------------------a~GIVi~TG~nTeiG 220 (972)
T KOG0202|consen 180 VPKDENADVQDKKNIA-----------------FSGTLVVAGR----------------------AKGIVIGTGLNTEIG 220 (972)
T ss_pred ccCCCCCccccceeeE-----------------eecceeecCc----------------------eeEEEEeccccchHH
Confidence 22 2233334444 8888888888 679999999999999
Q ss_pred hhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc-CCCCCCccccCCCchhhhHHHHHHHHhhcccc
Q psy15803 285 KNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTL-GRNAGDWYLLSRNPSFHSNLLTFIILYNNLIP 360 (1045)
Q Consensus 285 ~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP 360 (1045)
++.+ ..+..++++|+.++.+...+..+..++|+.++++..-|.. ..+..+|+. .....|..++++.+++||
T Consensus 221 ~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk-----~~~~~f~IaVsLAVAAIP 295 (972)
T KOG0202|consen 221 KIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFK-----GALYYFKIAVSLAVAAIP 295 (972)
T ss_pred HHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchh-----chhhhhhHHHHHHHHhcc
Confidence 8876 5567789999999999999987777777777766433322 223344553 455678889999999999
Q ss_pred chhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCC--
Q psy15803 361 ISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPN-- 438 (1045)
Q Consensus 361 ~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~-- 438 (1045)
++||+.++++++++.++| +++++++|.+..+|+||-+++||+|||||||+|+|.++++++.+..+...
T Consensus 296 EGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~ 365 (972)
T KOG0202|consen 296 EGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDE 365 (972)
T ss_pred CCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccc
Confidence 999999999999999998 99999999999999999999999999999999999999999876543321
Q ss_pred CCC------ch--hHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCC-------------------------------
Q psy15803 439 FNS------NN--VQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAG------------------------------- 479 (1045)
Q Consensus 439 ~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~------------------------------- 479 (1045)
++. .. ..........+....+...+.....++|+....+.+
T Consensus 366 f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~ 445 (972)
T KOG0202|consen 366 FNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRST 445 (972)
T ss_pred cccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhh
Confidence 000 00 000000000011123445556666666654433211
Q ss_pred -------------------ceeecccCCCCcccceEEEEecCC-------------------------------------
Q psy15803 480 -------------------NILVPNFNSNNVKEQSRMIARNPS------------------------------------- 503 (1045)
Q Consensus 480 -------------------~~l~~~f~~~~~~~~~svi~~~~~------------------------------------- 503 (1045)
++-.+||+++| |+|++.+..+.
T Consensus 446 ~~s~~~~~~c~~~~~~~~~~~~elpFssdr--K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 446 NLSNEEASACNRVYSRLFKKIAELPFSSDR--KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred cccccccccchhHHHHhhhheeEeeccccc--ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 01267899999 99998876322
Q ss_pred ----------------------------------------------------------CCchhHHHHHHHHHHHHHhhhh
Q psy15803 504 ----------------------------------------------------------IEPVVREFLTMLAVCHTVYIEL 525 (1045)
Q Consensus 504 ----------------------------------------------------------~~~~~~~~~~ti~~~~~~~~~~ 525 (1045)
.||||++.++++..|+++|+++
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV 603 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRV 603 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEE
Confidence 1277788999999999999998
Q ss_pred hhHH--------HHHHHcCCCCCCc---eEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcC
Q psy15803 526 KHRT--------ALASLLGTTNNNY---ALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNT 594 (1045)
Q Consensus 526 ~~~~--------~~~~~lG~~~~~~---~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~ 594 (1045)
.|+| ++++.+|+...+. ..+++|++++.+.+++++....+ ..+|+|++|++|.+||+.||+.
T Consensus 604 ~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~------~~vFaR~~P~HK~kIVeaLq~~- 676 (972)
T KOG0202|consen 604 IMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRR------VLVFARAEPQHKLKIVEALQSR- 676 (972)
T ss_pred EEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhc------ceEEEecCchhHHHHHHHHHhc-
Confidence 8887 6799999765443 57899999999999888766655 4499999999999999999999
Q ss_pred CCEEEEecCCccChHHHHhccccc--cccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGV--GISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLY 672 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGi--gi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~ 672 (1045)
|.+|+|+|||+||+||||+||||| |++|+|++++|+|++|++|+|+.|..++ .+||.+|+|+++++.|.+..|+...
T Consensus 677 geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAV-EEGr~IynNik~Fir~~lSsnVgev 755 (972)
T KOG0202|consen 677 GEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAV-EEGRAIYNNIKNFIRYLLSSNVGEV 755 (972)
T ss_pred CCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHH-HHhHHHHHHHHHHHHHHHhhhHHHH
Confidence 999999999999999999999999 7799999999999999999999999999 9999999999999999999999998
Q ss_pred HHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHHHHHHHHHHH
Q psy15803 673 VMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIWIGNALFHS 752 (1045)
Q Consensus 673 ~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s 752 (1045)
...++.+.+.-. .++.++|++|+|++++.+|+.++|+...|. +.+.+.|+ ..+..+++.|.|++++..|.|-+
T Consensus 756 ~~I~l~aa~~~p---~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~--DiM~kpPR--~~~~~iit~~l~~r~l~~g~~vg 828 (972)
T KOG0202|consen 756 VLIFLTAAFGIP---EPLIPVQILWINLVTDGPPATALGFEPVDP--DIMKKPPR--DSKDGIITGWLIFRYLAIGIIVG 828 (972)
T ss_pred HHHHHHHHhCCC---CcccchhhheeeeeccCCchhhcCCCCCCh--hHHhCCCC--CCCCCeeeHHHHHHHHHhheeee
Confidence 887777766433 789999999999999999999999877764 45666665 47788999999999999999998
Q ss_pred HHHHHHhhhhcc
Q psy15803 753 MLMFWIPMLIYG 764 (1045)
Q Consensus 753 ~~~~~~~~~~~~ 764 (1045)
+.+.+..++-|.
T Consensus 829 ~~Tv~~f~~~~~ 840 (972)
T KOG0202|consen 829 VATVGVFVWWMY 840 (972)
T ss_pred eeEhHhhhHHHh
Confidence 877555444443
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-80 Score=783.49 Aligned_cols=622 Identities=18% Similarity=0.202 Sum_probs=482.5
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhcccc-cc-------ccCCcchhhhHHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPD-VS-------PTGRYTTLIPLILIMVVSGIKE 123 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~-~~-------~~~~~~~~~~l~~i~~i~~i~~ 123 (1045)
+..+||.|.++..|.+. .++.|++||.+++++.++++++++++.. +. ..+.|..++++++++++++++.
T Consensus 45 rl~~~G~N~l~~~~~~~---~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~ 121 (997)
T TIGR01106 45 ILARDGPNALTPPPTTP---EWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFS 121 (997)
T ss_pred HHHHhCCCCCCCCCCCC---HHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 45789999998766554 3567799999999999999999876531 10 1135677888999999999999
Q ss_pred HHHHHHHhhhhhhhcc---cEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccc
Q psy15803 124 IIEDIKRHLADGEINH---RSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETN 200 (1045)
Q Consensus 124 ~~~~~~~~~~~~~~n~---~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~ 200 (1045)
+++++|+++.++++++ .+++|+|||++++|+++||+|||+|.|++||.|||||+|+++++ +.||||+|||||.
T Consensus 122 ~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LTGES~ 197 (997)
T TIGR01106 122 YYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLTGESE 197 (997)
T ss_pred HHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccCCCCC
Confidence 9999999999887754 57999999999999999999999999999999999999999875 8999999999999
Q ss_pred cEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCc
Q psy15803 201 LKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPD 280 (1045)
Q Consensus 201 p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~ 280 (1045)
|+.|.+++.. ..|++.+|++++|+.+..+ ++.++|++||.+
T Consensus 198 pv~K~~~~~~--------------------------------------~~~~~~~n~l~~Gt~v~~G-~~~~~V~~tG~~ 238 (997)
T TIGR01106 198 PQTRSPEFTH--------------------------------------ENPLETRNIAFFSTNCVEG-TARGIVVNTGDR 238 (997)
T ss_pred ceeccCCCcc--------------------------------------cCccccCCeEEeccEeeee-eEEEEEEEcccc
Confidence 9999875321 0122333444444444332 278999999999
Q ss_pred chhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhc
Q psy15803 281 SKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNN 357 (1045)
Q Consensus 281 T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~ 357 (1045)
|++|++.+ ..+.+++++++.++++...+..+.++++++.++++.+.. .++...+..++.+++.
T Consensus 239 T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~i~v~v~ 304 (997)
T TIGR01106 239 TVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG--------------YTWLEAVIFLIGIIVA 304 (997)
T ss_pred chhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------CCHHHHHHHHHHHHhh
Confidence 99999887 456678999999999999988888887777666553321 1234467788899999
Q ss_pred cccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccC
Q psy15803 358 LIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVP 437 (1045)
Q Consensus 358 ~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~ 437 (1045)
+|||+||+++++++..++.++ +++++++|+++.+|+||+|++||||||||||+|+|+|+++++++..+..
T Consensus 305 ~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 374 (997)
T TIGR01106 305 NVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA 374 (997)
T ss_pred cCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEec
Confidence 999999999999999999998 7889999999999999999999999999999999999999988765532
Q ss_pred CCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCC--------------------------------------
Q psy15803 438 NFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAG-------------------------------------- 479 (1045)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~-------------------------------------- 479 (1045)
+..... .. .......+....++.++++||+.....+
T Consensus 375 ~~~~~~--~~----~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~ 448 (997)
T TIGR01106 375 DTTEDQ--SG----VSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERN 448 (997)
T ss_pred CCccCC--CC----ccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhC
Confidence 211000 00 0000001223344555555654321100
Q ss_pred -ceeecccCCCCcccceEEEEe----------------------------------------------------------
Q psy15803 480 -NILVPNFNSNNVKEQSRMIAR---------------------------------------------------------- 500 (1045)
Q Consensus 480 -~~l~~~f~~~~~~~~~svi~~---------------------------------------------------------- 500 (1045)
.+..+||+|+| |+|++++.
T Consensus 449 ~~v~~~pF~s~r--K~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRv 526 (997)
T TIGR01106 449 PKVVEIPFNSTN--KYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERV 526 (997)
T ss_pred ceeEEeccCCCC--ceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEE
Confidence 01145777777 66665543
Q ss_pred ------------------------------------cCCCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcC
Q psy15803 501 ------------------------------------NPSIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLG 536 (1045)
Q Consensus 501 ------------------------------------~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG 536 (1045)
....||+|++.++++..++++|+++.+.| ++++.+|
T Consensus 527 la~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 527 LGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred EEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 22222445555566666677776654444 4578888
Q ss_pred CCCCC-----------------------ceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhc
Q psy15803 537 TTNNN-----------------------YALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVN 593 (1045)
Q Consensus 537 ~~~~~-----------------------~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~ 593 (1045)
+...+ ...+++|.+++.+.++++. ++..+++.+||||++|+||.++|+.+|+.
T Consensus 607 i~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~----~~~~~~~~~VfaR~sPeqK~~IV~~lq~~ 682 (997)
T TIGR01106 607 IISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLD----EILKYHTEIVFARTSPQQKLIIVEGCQRQ 682 (997)
T ss_pred CCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHH----HHHHhcCCEEEEECCHHHHHHHHHHHHHC
Confidence 74321 1479999999998876554 44445677899999999999999999998
Q ss_pred CCCEEEEecCCccChHHHHhccccc--cccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHH
Q psy15803 594 TNSVTLAIGDGANDVAMIQKAHVGV--GISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICL 671 (1045)
Q Consensus 594 ~g~~v~~iGDG~ND~~al~~AdVGi--gi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~ 671 (1045)
|++|+|+|||+||+|||++||||| |.+|+|++++|+|+++++++|+.|++++ .|||++|.|+++++.|.+++|++.
T Consensus 683 -g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai-~~GR~i~~ni~k~i~~~l~~ni~~ 760 (997)
T TIGR01106 683 -GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGV-EEGRLIFDNLKKSIAYTLTSNIPE 760 (997)
T ss_pred -CCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999999999999999999 5679999999999999999999999997 999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHHHH-HHHHH
Q psy15803 672 YVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIWI-GNALF 750 (1045)
Q Consensus 672 ~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~-~~~~~ 750 (1045)
+++.+++.++..+ .++.++|++|+|+++|++|+++++. .+.+++.+.+.|+ -.+...+++.+.++.|+ ..|++
T Consensus 761 ~~~~~~~~~~~~~---~pl~~~qlL~inli~d~lp~~al~~--e~~~~~~m~~~P~-~~~~~~l~~~~~~~~~~~~~g~~ 834 (997)
T TIGR01106 761 ITPFLIFIIANIP---LPLGTITILCIDLGTDMVPAISLAY--EKAESDIMKRQPR-NPKTDKLVNERLISMAYGQIGMI 834 (997)
T ss_pred HHHHHHHHHHcCc---chhHHHHHHHHHHHHHHHHHHHHhc--CCCCcccccCCCc-CCccccccCHHHHHHHHHHHHHH
Confidence 9999999988655 5788999999999999999999998 3334445555565 22456888888887765 56999
Q ss_pred HHHHHHHHhhhhc
Q psy15803 751 HSMLMFWIPMLIY 763 (1045)
Q Consensus 751 ~s~~~~~~~~~~~ 763 (1045)
++++.|+..++.+
T Consensus 835 ~~~~~~~~~~~~~ 847 (997)
T TIGR01106 835 QALGGFFTYFVIL 847 (997)
T ss_pred HHHHHHHHHHHHH
Confidence 9998877766544
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-82 Score=713.16 Aligned_cols=628 Identities=18% Similarity=0.205 Sum_probs=496.0
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccc----cCCcchh---hhHHHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSP----TGRYTTL---IPLILIMVVSGIKEI 124 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~----~~~~~~~---~~l~~i~~i~~i~~~ 124 (1045)
+++.||+|.++..+... ++.++|+.|++..-+++.+++++++...+.. .+|+..+ +.++.+++++++.++
T Consensus 128 Rr~~fG~N~~p~k~~K~---Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy 204 (1034)
T KOG0204|consen 128 RRKIFGSNTYPEKPPKG---FLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDY 204 (1034)
T ss_pred HHHhcCCCCCCCCCCcc---HHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchh
Confidence 35679999999988654 3467799999999999999999998865532 2444432 234456667888888
Q ss_pred HHHHHHhhhhhhhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEee
Q psy15803 125 IEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVR 204 (1045)
Q Consensus 125 ~~~~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K 204 (1045)
.++.+-++.+++..+.++.|+|||+.++|+..||+||||+.++.||.+||||++++|++ +.||||+|||||+++.|
T Consensus 205 ~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~v~k 280 (1034)
T KOG0204|consen 205 RQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDHVQK 280 (1034)
T ss_pred HHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcceec
Confidence 88888888887778889999999999999999999999999999999999999999987 99999999999999999
Q ss_pred cCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhh
Q psy15803 205 QAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLM 284 (1045)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~ 284 (1045)
.+. .+.+.++||.+.+|.+ .++|+.+|.+|..|
T Consensus 281 ~~~-------------------------~dPfLlSGTkv~eGsg----------------------kMlVTaVGmnt~wG 313 (1034)
T KOG0204|consen 281 SLD-------------------------KDPFLLSGTKVMEGSG----------------------KMLVTAVGMNTQWG 313 (1034)
T ss_pred cCC-------------------------CCCeEeecceeecCcc----------------------eEEEEEeeecchHh
Confidence 652 3445599999999984 59999999999888
Q ss_pred hhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC----CCCC-ccccCC-CchhhhHHHHHHHHh
Q psy15803 285 KNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGR----NAGD-WYLLSR-NPSFHSNLLTFIILY 355 (1045)
Q Consensus 285 ~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~----~~~~-~~~~~~-~~~~~~~~~~~i~ll 355 (1045)
++.. .....++++|-++++++..+..+.++++++++++....+... +... |-.... ...+...|..++.++
T Consensus 314 ~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTil 393 (1034)
T KOG0204|consen 314 IIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTIL 393 (1034)
T ss_pred hHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEE
Confidence 8776 445578999999999999998888888877766654432211 1111 211110 234556677788899
Q ss_pred hccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccc
Q psy15803 356 NNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNIL 435 (1045)
Q Consensus 356 ~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~ 435 (1045)
++++|++||+++++++++++++|.+| +.++|.++++|++|..+.||+|||||||.|+|++.+.++++..|
T Consensus 394 VVAVPEGLPLAVTLsLAys~kkMmkD----------~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~ 463 (1034)
T KOG0204|consen 394 VVAVPEGLPLAVTLSLAYSMKKMMKD----------NNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHY 463 (1034)
T ss_pred EEECCCCccHHHHHHHHHHHHHHhcc----------hhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccc
Confidence 99999999999999999999999554 78899999999999999999999999999999999999998877
Q ss_pred cCCCCC-----chhH----hhhhh-----------------hcCCCCchHHHHHHHHHHhhceeeeecCCce-eecccCC
Q psy15803 436 VPNFNS-----NNVQ----EQSRM-----------------IARNPSIEPVVREFLTMLAVCHTVCSVAGNI-LVPNFNS 488 (1045)
Q Consensus 436 ~~~~~~-----~~~~----~~~~~-----------------~~~~~~~~~~~~~~~~~l~~c~~v~~~~~~~-l~~~f~~ 488 (1045)
..+... +.+. +.-.. ..+.|. +..+-.|...|..--.-.....++ -+.||+|
T Consensus 464 k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspT-E~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS 542 (1034)
T KOG0204|consen 464 KVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPT-ECALLGFGLKLGMDFQDVRPEEKVVKVYPFNS 542 (1034)
T ss_pred cccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHH-HHHHHHHHHHhCcchHhhcchhheeEEeccCc
Confidence 632211 1110 00000 000111 222222222222110000000000 1345555
Q ss_pred CCcccceEEEE---------------------------------------------------------------------
Q psy15803 489 NNVKEQSRMIA--------------------------------------------------------------------- 499 (1045)
Q Consensus 489 ~~~~~~~svi~--------------------------------------------------------------------- 499 (1045)
+| |+|++++
T Consensus 543 ~k--K~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~ 620 (1034)
T KOG0204|consen 543 VK--KRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGP 620 (1034)
T ss_pred cc--ceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCC
Confidence 55 5555444
Q ss_pred --------------------ecCCCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCC-ceEEEechh
Q psy15803 500 --------------------RNPSIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNN-YALIIDGLA 550 (1045)
Q Consensus 500 --------------------~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~-~~~vi~G~~ 550 (1045)
..+..||+|++.+++++.|+.+|+++.|.| ++|.++|+-.++ .-++++|.+
T Consensus 621 ~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~e 700 (1034)
T KOG0204|consen 621 DEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKE 700 (1034)
T ss_pred CCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchh
Confidence 444455888889999999999999988877 679999987544 358999999
Q ss_pred hHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccc--cccCchhhhh
Q psy15803 551 LDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGV--GISGVEGLQA 628 (1045)
Q Consensus 551 l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGi--gi~g~e~a~~ 628 (1045)
+....+++..+...++. |.||.||.||.-+|+.+++. |++|+.+|||.||+|||++||||. ||+|+|+|++
T Consensus 701 Fr~~s~ee~~~i~pkl~------VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKE 773 (1034)
T KOG0204|consen 701 FRELSQEERDKIWPKLR------VLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKE 773 (1034)
T ss_pred hhhcCHHHHHhhhhhhe------eeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhh
Confidence 99999999888888876 99999999999999999988 999999999999999999999999 8899999999
Q ss_pred hhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhh
Q psy15803 629 ACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPL 708 (1045)
Q Consensus 629 a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~ 708 (1045)
++|+++++|||+.+++++ .+||..|.+++|+++|.++-|++..++.|..++..+- .|+.+.||+|.|+++|.|.++
T Consensus 774 aSDIIi~DDNFssIVk~v-~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~d---sPLtAVQlLWVNLIMDTLgAL 849 (1034)
T KOG0204|consen 774 ASDIIILDDNFSSIVKAV-KWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGD---SPLTAVQLLWVNLIMDTLGAL 849 (1034)
T ss_pred hCCeEEEcCchHHHHHHH-HhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCC---ccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 8999999999999999999999999999988888655 789999999999999999999
Q ss_pred hhhcccccCChhhhhcCCcccccccCcccHHHHHHHHHHHHHHHHHHHHHhhh
Q psy15803 709 AIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPML 761 (1045)
Q Consensus 709 ~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~ 761 (1045)
+++-..+ .++.|.|.| |+++.++++...+-..+.+++||-+++|.+-+.
T Consensus 850 ALATepP--t~~Lm~RkP--~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~ 898 (1034)
T KOG0204|consen 850 ALATEPP--TDELMKRKP--VGRTKPLITRTMWKNILGQAVYQLIVLFILNFA 898 (1034)
T ss_pred HhccCCC--ChHHhcCCC--CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9975333 233444555 589999999888778899999999999877664
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-80 Score=775.95 Aligned_cols=624 Identities=19% Similarity=0.214 Sum_probs=481.8
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHh
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH 131 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~ 131 (1045)
+..+||.|.++..|... +++.|++||.++++++++++++++++ .+.|..++.++++++++++..++++++++
T Consensus 35 rl~~~G~N~l~~~~~~s---~~~~~l~q~~~~~~~iL~~aails~~-----~~~~~~~~iIl~vv~in~~i~~~QE~~ae 106 (1053)
T TIGR01523 35 RLKEVGENRLEADSGID---AKAMLLHQVCNAMCMVLIIAAAISFA-----MHDWIEGGVISAIIALNILIGFIQEYKAE 106 (1053)
T ss_pred HHHHcCCCCCCCCCCCC---HHHHHHHHHhCHHHHHHHHHHHHHHH-----HhhHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 45789999999877543 34677999999999999999999998 57888999999999999999999999999
Q ss_pred hhhhhh---cccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCC
Q psy15803 132 LADGEI---NHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208 (1045)
Q Consensus 132 ~~~~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~ 208 (1045)
++.+.+ ...+++|+|||++++|+++||||||||.|++||.||||++|+++++ +.||||+|||||.|+.|.+..
T Consensus 107 kal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~~~~ 182 (1053)
T TIGR01523 107 KTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKDAHA 182 (1053)
T ss_pred HHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceeccccc
Confidence 987665 4567999999999999999999999999999999999999999876 999999999999999998642
Q ss_pred CCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc
Q psy15803 209 ETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT 288 (1045)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~ 288 (1045)
......+ ....+..+..|+||.+.+|. +.|+|++||.+|.+|++.+
T Consensus 183 ~~~~~~~------------~~~~d~~n~lf~GT~V~~G~----------------------g~~vVvatG~~T~~GkIa~ 228 (1053)
T TIGR01523 183 TFGKEED------------TPIGDRINLAFSSSAVTKGR----------------------AKGICIATALNSEIGAIAA 228 (1053)
T ss_pred ccccccc------------CCcccCCCccccCceEEeee----------------------EEEEEEEecCccHHHHHHH
Confidence 1100000 00011222337777777776 6899999999999999876
Q ss_pred CCC--------------------------------------CCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q psy15803 289 SAP--------------------------------------LKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGR 330 (1045)
Q Consensus 289 ~~~--------------------------------------~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 330 (1045)
... ..++++++.+++++.+++.+.++++++.++...+-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~---- 304 (1053)
T TIGR01523 229 GLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD---- 304 (1053)
T ss_pred HHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----
Confidence 211 01389999999999998888888887766543210
Q ss_pred CCCCccccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEE
Q psy15803 331 NAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFV 410 (1045)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i 410 (1045)
.+...+..+++++++++|++||+.+++++++++.+| +++++++|+++++|+||.+++|
T Consensus 305 ------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM----------ak~~~lVr~L~avEtLG~vtvI 362 (1053)
T TIGR01523 305 ------------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANM----------SKRNVIVRKLDALEALGAVNDI 362 (1053)
T ss_pred ------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH----------HhcCCEeccchhhhhccCccEE
Confidence 112356678899999999999999999999999999 8899999999999999999999
Q ss_pred eecCCCccccceEEEEEEEEcCc-cccC-----CCCCc-----------------------hhHhhh--hhhcCC-CC--
Q psy15803 411 FSDKTGTLTRNVMEFKICSVAGN-ILVP-----NFNSN-----------------------NVQEQS--RMIARN-PS-- 456 (1045)
Q Consensus 411 ~~DKTGTLT~n~m~~~~~~~~~~-~~~~-----~~~~~-----------------------~~~~~~--~~~~~~-~~-- 456 (1045)
|+|||||||+|+|+++++++++. .+.. .+... ...... .....+ +.
T Consensus 363 CsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1053)
T TIGR01523 363 CSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDI 442 (1053)
T ss_pred EecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999987641 1100 00000 000000 000000 00
Q ss_pred chHHHHHHHHHHhhceeeeecC----------------------------------------------------------
Q psy15803 457 IEPVVREFLTMLAVCHTVCSVA---------------------------------------------------------- 478 (1045)
Q Consensus 457 ~~~~~~~~~~~l~~c~~v~~~~---------------------------------------------------------- 478 (1045)
.++...+++...++||......
T Consensus 443 ~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1053)
T TIGR01523 443 DMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGS 522 (1053)
T ss_pred ccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccc
Confidence 0122334455555554322100
Q ss_pred ---CceeecccCCCCcccceEEEEecCCCC--------------------------------------------------
Q psy15803 479 ---GNILVPNFNSNNVKEQSRMIARNPSIE-------------------------------------------------- 505 (1045)
Q Consensus 479 ---~~~l~~~f~~~~~~~~~svi~~~~~~~-------------------------------------------------- 505 (1045)
..+-.+||+|+| |+|+++++.+.++
T Consensus 523 ~~~~~~~~~pFds~r--K~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 600 (1053)
T TIGR01523 523 AQFEFIAEFPFDSEI--KRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEG 600 (1053)
T ss_pred cccceEEEeccCCCC--CeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcC
Confidence 011246899999 9999887643111
Q ss_pred ---------------------------------------------chhHHHHHHHHHHHHHhhhhhhHH--------HHH
Q psy15803 506 ---------------------------------------------PVVREFLTMLAVCHTVYIELKHRT--------ALA 532 (1045)
Q Consensus 506 ---------------------------------------------~~~~~~~~ti~~~~~~~~~~~~~~--------~~~ 532 (1045)
++|++.+++|+.|+++|+++.|.| ++|
T Consensus 601 lRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA 680 (1053)
T TIGR01523 601 LRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIA 680 (1053)
T ss_pred CeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
Confidence 112233345666667777666554 558
Q ss_pred HHcCCCCCC---------ceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecC
Q psy15803 533 SLLGTTNNN---------YALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGD 603 (1045)
Q Consensus 533 ~~lG~~~~~---------~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGD 603 (1045)
+.+|+...+ ...+++|++++.+.++++++... ...||||++|+||.++|+.+|+. |++|+|+||
T Consensus 681 ~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~------~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GD 753 (1053)
T TIGR01523 681 QEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKA------LCLVIARCAPQTKVKMIEALHRR-KAFCAMTGD 753 (1053)
T ss_pred HHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhh------cCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCC
Confidence 899986432 35899999999888776655433 34699999999999999999999 999999999
Q ss_pred CccChHHHHhccccc--cccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHH
Q psy15803 604 GANDVAMIQKAHVGV--GISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIY 681 (1045)
Q Consensus 604 G~ND~~al~~AdVGi--gi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~ 681 (1045)
|+||+|||++||||| |++|+|++++++|+++.+++|+.|.+++ .|||++|+|+++++.|.+++|+..+++.+++.++
T Consensus 754 GvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i-~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~ 832 (1053)
T TIGR01523 754 GVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAI-EEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAF 832 (1053)
T ss_pred CcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999 4579999999999999999999999998 9999999999999999999999999999999999
Q ss_pred hCCCcc--hhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHHHHHHHHHHHHHHHHHh
Q psy15803 682 SGWSGQ--VLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIP 759 (1045)
Q Consensus 682 ~~~s~~--~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~ 759 (1045)
..++|. .|+.++|++|+|++++++|++++|+. +.+.+.|.+.|. ....++++.+.++.+++.|++.+++.+...
T Consensus 833 ~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e--~~~~~~m~~~Pr--~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~ 908 (1053)
T TIGR01523 833 RDENGKSVFPLSPVEILWCIMITSCFPAMGLGLE--KAAPDLMDRLPH--DNEVGIFQKELIIDMFAYGFFLGGSCLASF 908 (1053)
T ss_pred hcccCCCcCchHHHHHHHHHHHHHHHHHHhhccC--CCChhHHhcCCC--CCCccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 888886 46889999999999999999999983 233444444454 356678898888889999999888776554
Q ss_pred hh
Q psy15803 760 ML 761 (1045)
Q Consensus 760 ~~ 761 (1045)
++
T Consensus 909 ~~ 910 (1053)
T TIGR01523 909 TG 910 (1053)
T ss_pred HH
Confidence 43
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-79 Score=767.56 Aligned_cols=629 Identities=17% Similarity=0.199 Sum_probs=470.1
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccc--------cccCCcchhhhHHHH----HHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDV--------SPTGRYTTLIPLILI----MVVS 119 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~--------~~~~~~~~~~~l~~i----~~i~ 119 (1045)
+..+||.|.++.++.+. +++.+++||+++++++|+++++++++... .+...|..++.++++ ++++
T Consensus 69 r~~~yG~N~l~~~~~~s---~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~ 145 (941)
T TIGR01517 69 REKVYGKNELPEKPPKS---FLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVT 145 (941)
T ss_pred HHHHhCCCCCCCCCCCC---HHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHH
Confidence 45679999999887754 34567899999999999999999987431 111234444444443 4445
Q ss_pred HHHHHHHHHHHhhhhhhhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCccc
Q psy15803 120 GIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGET 199 (1045)
Q Consensus 120 ~i~~~~~~~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs 199 (1045)
++.++.++++.++..+..++.+++|+|||++++|+++||+|||+|.|++||.|||||+|++|++ +.||||+|||||
T Consensus 146 ~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~----l~VdES~LTGES 221 (941)
T TIGR01517 146 AVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS----LEIDESSITGES 221 (941)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCc----EEEEecccCCCC
Confidence 5555555555555444455678999999999999999999999999999999999999999754 999999999999
Q ss_pred ccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecC
Q psy15803 200 NLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGP 279 (1045)
Q Consensus 200 ~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~ 279 (1045)
.|+.|.+++.. ..|+||.+.+|. +.++|++||.
T Consensus 222 ~pv~K~~~~~n-------------------------~v~~GT~v~~G~----------------------~~~iV~~tG~ 254 (941)
T TIGR01517 222 DPIKKGAPKDS-------------------------FLLSGTVVNEGS----------------------GRMLVTAVGV 254 (941)
T ss_pred CcccccCCCCc-------------------------eEEeCCeEEeeE----------------------EEEEEEEeCC
Confidence 99999875321 128888888876 6899999999
Q ss_pred cchhhhhccCC--CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-cC--CCCCCccccCCCchhhhHHHHHHHH
Q psy15803 280 DSKLMKNATSA--PLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWT-LG--RNAGDWYLLSRNPSFHSNLLTFIIL 354 (1045)
Q Consensus 280 ~T~~~~~~~~~--~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~i~l 354 (1045)
+|.+|++.+.. ..+++++++.++++..++..+.++++++.++++.+.. .. ..... .......++...+..++++
T Consensus 255 ~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~al~l 333 (941)
T TIGR01517 255 NSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR-DTEEDAQTFLDHFIIAVTI 333 (941)
T ss_pred CcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-ccchhhHHHHHHHHHHHHH
Confidence 99888876521 2256789999999999988888777777666553211 00 00000 0000012456688899999
Q ss_pred hhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCcc
Q psy15803 355 YNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNI 434 (1045)
Q Consensus 355 l~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~ 434 (1045)
++++|||+||++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|++++++..+..
T Consensus 334 lv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~ 403 (941)
T TIGR01517 334 VVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQR 403 (941)
T ss_pred HHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecce
Confidence 999999999999999999999988 8899999999999999999999999999999999999999876543
Q ss_pred ccCCCC----Cc---h-hHhhhhhhc---------------CCCCchHHHHHHHHHHhhceeee-ecCCceeecccCCCC
Q psy15803 435 LVPNFN----SN---N-VQEQSRMIA---------------RNPSIEPVVREFLTMLAVCHTVC-SVAGNILVPNFNSNN 490 (1045)
Q Consensus 435 ~~~~~~----~~---~-~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~c~~v~-~~~~~~l~~~f~~~~ 490 (1045)
+..+.. +. . +........ ++|. +..+..+........... .....+-..||++++
T Consensus 404 ~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~-e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~ 482 (941)
T TIGR01517 404 FNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKT-ECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSER 482 (941)
T ss_pred EecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCcc-HHHHHHHHHHcCCCHHHHHhhchhccccccCCCC
Confidence 321100 00 0 000000000 1111 111111111000000000 000000012333333
Q ss_pred --------------------------------------------------------------------------------
Q psy15803 491 -------------------------------------------------------------------------------- 490 (1045)
Q Consensus 491 -------------------------------------------------------------------------------- 490 (1045)
T Consensus 483 k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~ 562 (941)
T TIGR01517 483 KFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKD 562 (941)
T ss_pred CeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccccc
Confidence
Q ss_pred -cccceEEEEecCCCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCceEEEechhhHHHhhHHHHH
Q psy15803 491 -VKEQSRMIARNPSIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNNYALIIDGLALDYALKHELRK 561 (1045)
Q Consensus 491 -~~~~~svi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~ 561 (1045)
.++.+.+++.....|++|++.+++++.|+++|+++.|.| ++|+.+|+...+ ..+++|++++.+.++++++
T Consensus 563 ~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~-~~vi~G~~~~~l~~~el~~ 641 (941)
T TIGR01517 563 YPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG-GLAMEGKEFRRLVYEEMDP 641 (941)
T ss_pred ccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC-ceEeeHHHhhhCCHHHHHH
Confidence 012233444444456777888889999999999977766 669999997543 4699999999888777666
Q ss_pred HHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccc--cccCchhhhhhhccccccchh
Q psy15803 562 DFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGV--GISGVEGLQAACASDYSIGQF 639 (1045)
Q Consensus 562 ~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGi--gi~g~e~a~~a~~~~~~~~~f 639 (1045)
.+.+ ..||||++|+||.++|+.+|+. |++|+|+|||+||+|||++||||| |++|+|+|++|+|+++++++|
T Consensus 642 ~i~~------~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f 714 (941)
T TIGR01517 642 ILPK------LRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNF 714 (941)
T ss_pred Hhcc------CeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCH
Confidence 5543 4599999999999999999998 999999999999999999999999 557999999999999999999
Q ss_pred hhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCCh
Q psy15803 640 RFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSA 719 (1045)
Q Consensus 640 ~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~ 719 (1045)
+.|++++ .|||++|+|+++++.|.+++|++..++.+++.++.++ .++++++++|+|++++++|+++++. |.++
T Consensus 715 ~~I~~~i-~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~---~pl~~~qil~inl~~d~~~al~l~~---e~~~ 787 (941)
T TIGR01517 715 ASIVRAV-KWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISST---SPLTAVQLLWVNLIMDTLAALALAT---EPPT 787 (941)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHhhHHHHcc---CCcc
Confidence 9999999 9999999999999999999999999999988887653 5899999999999999999999983 4455
Q ss_pred hhhhcCCcccccccCcccHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy15803 720 RTRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPMLI 762 (1045)
Q Consensus 720 ~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~ 762 (1045)
..+|++|+.+ ++.++++...+..|++.|++++++.|+..++.
T Consensus 788 ~~lm~~~P~~-~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~ 829 (941)
T TIGR01517 788 EALLDRKPIG-RNAPLISRSMWKNILGQAGYQLVVTFILLFAG 829 (941)
T ss_pred HHHHhCCCCC-CCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777653 56678888888899999999999887665543
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-76 Score=735.43 Aligned_cols=580 Identities=15% Similarity=0.169 Sum_probs=451.1
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHh
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH 131 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~ 131 (1045)
+..+||.|.++..|.+. +++.|++||++|++++++++++++++ .+.|.+++.++++++++.+.++++++|+.
T Consensus 76 r~~~~G~N~l~~~~~~s---~~~~~~~~~~~p~~~lL~~aa~ls~~-----~~~~~~a~~I~~iv~i~~~i~~~qe~ra~ 147 (902)
T PRK10517 76 AREQHGENELPAQKPLP---WWVHLWVCYRNPFNILLTILGAISYA-----TEDLFAAGVIALMVAISTLLNFIQEARST 147 (902)
T ss_pred HHHhcCCCCCCCCCCCC---HHHHHHHHHHhHHHHHHHHHHHHHHH-----HccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999988764 34677999999999999999999988 56788899999999999999999999999
Q ss_pred hhhhhh---cccEEEEEEC------CeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccE
Q psy15803 132 LADGEI---NHRSVDVIRN------GMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLK 202 (1045)
Q Consensus 132 ~~~~~~---n~~~~~V~r~------g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~ 202 (1045)
++.+.+ .+.+++|+|| |++++|+++||+|||+|.|++||.|||||+|+++++ +.||||+|||||.|+
T Consensus 148 ~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES~PV 223 (902)
T PRK10517 148 KAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGESLPV 223 (902)
T ss_pred HHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCCCce
Confidence 776554 5667999999 789999999999999999999999999999999765 899999999999999
Q ss_pred eecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcch
Q psy15803 203 VRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSK 282 (1045)
Q Consensus 203 ~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~ 282 (1045)
.|.+++...... +.-+.....|+||.+.+|. +.++|++||.+|.
T Consensus 224 ~K~~~~~~~~~~--------------~~~~~~n~vfaGT~V~~G~----------------------~~~vV~atG~~T~ 267 (902)
T PRK10517 224 EKFATTRQPEHS--------------NPLECDTLCFMGTNVVSGT----------------------AQAVVIATGANTW 267 (902)
T ss_pred eccccccccccc--------------CccccccceeeCceEeeee----------------------EEEEEEEeccccH
Confidence 998875321100 0001122337777777776 7899999999999
Q ss_pred hhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccc
Q psy15803 283 LMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLI 359 (1045)
Q Consensus 283 ~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~i 359 (1045)
+|++.+ .+..+++++++.++++..++..+.++++.++++++.+.. .++...+..++++++.+|
T Consensus 268 ~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~--------------~~~~~~l~~alsv~V~~~ 333 (902)
T PRK10517 268 FGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK--------------GDWWEAALFALSVAVGLT 333 (902)
T ss_pred HHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc--------------CCHHHHHHHHHHHHHHHc
Confidence 999876 456678999999999999888888877776665543221 134557889999999999
Q ss_pred cchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCC
Q psy15803 360 PISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNF 439 (1045)
Q Consensus 360 P~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~ 439 (1045)
||+||++++++...++.++ +++++++|+++.+|+||++|+||||||||||+|+|++.++.... + .
T Consensus 334 Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~---~--~ 398 (902)
T PRK10517 334 PEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS---G--K 398 (902)
T ss_pred ccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC---C--C
Confidence 9999999999999999988 88999999999999999999999999999999999999864211 0 0
Q ss_pred CCchhHhhhhhhcC--CCCchHHHHHHHHHHhhc--eeeeecCCceeecccCCCCcccceE-------------------
Q psy15803 440 NSNNVQEQSRMIAR--NPSIEPVVREFLTMLAVC--HTVCSVAGNILVPNFNSNNVKEQSR------------------- 496 (1045)
Q Consensus 440 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~c--~~v~~~~~~~l~~~f~~~~~~~~~s------------------- 496 (1045)
.+..+.....+... ....++....++...... |........+-..||++++ |+|+
T Consensus 399 ~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~--k~msvvv~~~~~~~~~~~KGa~e 476 (902)
T PRK10517 399 TSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFER--RRMSVVVAENTEHHQLICKGALE 476 (902)
T ss_pred CHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCc--ceEEEEEEECCCeEEEEEeCchH
Confidence 11122211111000 000112222211111100 0000000011122333333 3333
Q ss_pred ----------------------------------------------------------------EEEecCCCCchhHHHH
Q psy15803 497 ----------------------------------------------------------------MIARNPSIEPVVREFL 512 (1045)
Q Consensus 497 ----------------------------------------------------------------vi~~~~~~~~~~~~~~ 512 (1045)
+++.....||+|++.+
T Consensus 477 ~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~ 556 (902)
T PRK10517 477 EILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTA 556 (902)
T ss_pred HHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHH
Confidence 3333333458888889
Q ss_pred HHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHH
Q psy15803 513 TMLAVCHTVYIELKHRT--------ALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKA 584 (1045)
Q Consensus 513 ~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~ 584 (1045)
++|+.|+++|+++.|.| ++|+.+|+.. ..+++|.+++.+.++++.+.+.+.. ||||++|+||.
T Consensus 557 ~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---~~v~~G~el~~l~~~el~~~~~~~~------VfAr~sPe~K~ 627 (902)
T PRK10517 557 PALKALKASGVTVKILTGDSELVAAKVCHEVGLDA---GEVLIGSDIETLSDDELANLAERTT------LFARLTPMHKE 627 (902)
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc---cCceeHHHHHhCCHHHHHHHHhhCc------EEEEcCHHHHH
Confidence 99999999999987776 6699999964 3489999999988887777666533 99999999999
Q ss_pred HHHHHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhhe
Q psy15803 585 EVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILY 663 (1045)
Q Consensus 585 ~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~ 663 (1045)
++|+.+|++ |++|+|+|||+||+|||++|||||++ +|+|+|++|+|+++++++|..|.+++ .+||.+|+|++|++.|
T Consensus 628 ~IV~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai-~~gR~i~~nI~k~i~~ 705 (902)
T PRK10517 628 RIVTLLKRE-GHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGV-IEGRRTFANMLKYIKM 705 (902)
T ss_pred HHHHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999998 99999999999999999999999966 78999999999999999999999999 8999999999999999
Q ss_pred eehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcc
Q psy15803 664 SFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPIL 728 (1045)
Q Consensus 664 ~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~l 728 (1045)
.+..|+..++..++..++.++ .|+.+.|++|.|++++ +|.++++.... +...|+.|+.
T Consensus 706 ~ls~n~~~v~~~~~~~~~~~~---~pl~~~qiL~inl~~D-~~~~al~~d~~---~~~~m~~p~r 763 (902)
T PRK10517 706 TASSNFGNVFSVLVASAFLPF---LPMLPLHLLIQNLLYD-VSQVAIPFDNV---DDEQIQKPQR 763 (902)
T ss_pred HHHhhHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHH-HhHHhhcCCCC---ChhhhcCCCC
Confidence 999999998888877766432 5799999999999999 78888875433 3345566764
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-76 Score=740.09 Aligned_cols=612 Identities=20% Similarity=0.230 Sum_probs=469.3
Q ss_pred HHHHHHhHHHHHHHHHHHHhccccccc-----cCCcchhhhHHHHHHHHHHHHHHHHHHHhhhhhhhc---ccEEEEEEC
Q psy15803 76 LFEQFRRYSNIFFLFIALLQQIPDVSP-----TGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEIN---HRSVDVIRN 147 (1045)
Q Consensus 76 l~~qf~~~~n~~fl~~~il~~i~~~~~-----~~~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~~n---~~~~~V~r~ 147 (1045)
+++||+++++++++++++++++..+.+ .+.|..++.++++++++++...+++++++++.+.+. +.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 478999999999999999999865332 245778888889999999999999999998876664 567999999
Q ss_pred CeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEE
Q psy15803 148 GMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIE 227 (1045)
Q Consensus 148 g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~ 227 (1045)
|++++|+++||+|||||.|++||.|||||+|+++++ |.||||+|||||.|+.|.++.....
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~~~--------------- 141 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVPDE--------------- 141 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccCcc---------------
Confidence 999999999999999999999999999999999875 9999999999999999987532100
Q ss_pred ecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHH
Q psy15803 228 CDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQ 304 (1045)
Q Consensus 228 ~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~ 304 (1045)
...+.+.+|++++||.+.++. +.++|++||.+|++|++.+ ..+.+++++++.++++
T Consensus 142 --------------------~~~~~~~~n~l~~GT~v~~G~-~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~ 200 (917)
T TIGR01116 142 --------------------RAVNQDKKNMLFSGTLVVAGK-ARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEF 200 (917)
T ss_pred --------------------ccCcccccceeeeCCEEecce-EEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHH
Confidence 011223445666666665543 8999999999999998654 5667789999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcC-CCCCCccccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccc
Q psy15803 305 TIMLFVLLLALCFISAAASTIWTLG-RNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMD 383 (1045)
Q Consensus 305 ~~~~~~~~~~~~~i~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~ 383 (1045)
+..++.+.++++++.++++..+... .....|+ ..+...+..++++++++||++||+++++++++++.++
T Consensus 201 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m----- 270 (917)
T TIGR01116 201 GELLSKVIGLICILVWVINIGHFNDPALGGGWI-----QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKM----- 270 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccchhH-----HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHH-----
Confidence 9999888888777766654332111 1111232 1234456677889999999999999999999999999
Q ss_pred cccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCcccc---------CCCCCch-hHhhhhhhcC
Q psy15803 384 MYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILV---------PNFNSNN-VQEQSRMIAR 453 (1045)
Q Consensus 384 ~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~ 453 (1045)
+++++++|+++.+|+||++++||||||||||+|+|+|++++..+..+. ..+.... .... ....
T Consensus 271 -----~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 343 (917)
T TIGR01116 271 -----AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKD--DGPV 343 (917)
T ss_pred -----HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCcccccc--CCcc
Confidence 778999999999999999999999999999999999999987653210 0000000 0000 0000
Q ss_pred CCCchHHHHHHHHHHhhceeeeecC-----------C-----------------------------------------ce
Q psy15803 454 NPSIEPVVREFLTMLAVCHTVCSVA-----------G-----------------------------------------NI 481 (1045)
Q Consensus 454 ~~~~~~~~~~~~~~l~~c~~v~~~~-----------~-----------------------------------------~~ 481 (1045)
.....+....++.++++||+..... + .+
T Consensus 344 ~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (917)
T TIGR01116 344 AGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKL 423 (917)
T ss_pred cccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhccee
Confidence 0000123445566666666532110 0 11
Q ss_pred eecccCCCCcccceEEEEecCC----------------------------------------------------------
Q psy15803 482 LVPNFNSNNVKEQSRMIARNPS---------------------------------------------------------- 503 (1045)
Q Consensus 482 l~~~f~~~~~~~~~svi~~~~~---------------------------------------------------------- 503 (1045)
-.+||+|+| |+|+++++...
T Consensus 424 ~~~pF~s~r--K~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~ 501 (917)
T TIGR01116 424 ATLEFSRDR--KSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAF 501 (917)
T ss_pred eecccChhh--CeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 246888888 88888765311
Q ss_pred ---------------------------------CCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCc
Q psy15803 504 ---------------------------------IEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNNY 542 (1045)
Q Consensus 504 ---------------------------------~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~ 542 (1045)
.||++++.+++++.++++|+++.+.| ++++.+|+..++.
T Consensus 502 k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~ 581 (917)
T TIGR01116 502 KDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDE 581 (917)
T ss_pred EECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCc
Confidence 11223344455555566666544443 4588888765433
Q ss_pred ---eEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhcccccc
Q psy15803 543 ---ALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVG 619 (1045)
Q Consensus 543 ---~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGig 619 (1045)
..+++|++++.+.++++... .++.+||||++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||+
T Consensus 582 ~v~~~~~~g~~l~~~~~~~~~~~------~~~~~v~ar~~P~~K~~iV~~lq~~-g~~va~iGDG~ND~~alk~AdVGia 654 (917)
T TIGR01116 582 DVTFKSFTGREFDEMGPAKQRAA------CRSAVLFSRVEPSHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADIGIA 654 (917)
T ss_pred cccceeeeHHHHhhCCHHHHHHh------hhcCeEEEecCHHHHHHHHHHHHhc-CCeEEEecCCcchHHHHHhCCeeEE
Confidence 35789999887765544332 3457799999999999999999987 9999999999999999999999998
Q ss_pred c-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHH
Q psy15803 620 I-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLY 698 (1045)
Q Consensus 620 i-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 698 (1045)
+ +|+|++++++|.++.+++|+.|.+++ .|||++|+|+++++.|.+++|+..+++++++.++.. ..+|++++++|+
T Consensus 655 ~g~g~~~ak~aAD~vl~dd~f~~i~~~i-~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qll~i 730 (917)
T TIGR01116 655 MGSGTEVAKEASDMVLADDNFATIVAAV-EEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI---PEGLIPVQLLWV 730 (917)
T ss_pred CCCCcHHHHHhcCeEEccCCHHHHHHHH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC---CchHHHHHHHHH
Confidence 8 78999999999999999999999998 999999999999999999999999999999888632 268999999999
Q ss_pred HHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHHHHHHHHHHHHHHHHHhhh
Q psy15803 699 NVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPML 761 (1045)
Q Consensus 699 n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~ 761 (1045)
|++++++|++++|..+++ ++.+.+.|. .+++++++.+.|+.|++.|++++++.++..++
T Consensus 731 nli~d~lp~~~l~~~~~~--~~~m~~pP~--~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~ 789 (917)
T TIGR01116 731 NLVTDGLPATALGFNPPD--KDIMWKPPR--RPDEPLITGWLFFRYLVVGVYVGLATVGGFVW 789 (917)
T ss_pred HHHHHHHHHHHHhcCCcc--hhHhcCCCC--CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986665 444555555 35778999999999999999999886554443
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=731.63 Aligned_cols=620 Identities=16% Similarity=0.184 Sum_probs=477.4
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHH-HhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQF-RRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKR 130 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf-~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~ 130 (1045)
+..+||.|.++.++.+. +++.+++|| +++++++++++++++++ .+.|..++.+++++++..+..+++++++
T Consensus 33 r~~~~G~N~i~~~~~~s---~~~~~l~~~~~~~~~~~L~~aa~ls~~-----~g~~~~~~~i~~~i~~~~~i~~~qe~~a 104 (884)
T TIGR01522 33 RRAFHGWNEFDVEEDES---LWKKFLSQFVKNPLILLLIASAVISVF-----MGNIDDAVSITLAILIVVTVGFVQEYRS 104 (884)
T ss_pred HHHhcCCCcCCCCCCCC---HHHHHHHHHhhChHHHHHHHHHHHHHH-----HcchhhHHHHHhHHHHHHHHHHHHHHHH
Confidence 35789999999776543 346678999 99999999999999988 5677788878877888888999999999
Q ss_pred hhhhhhhc---ccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCC
Q psy15803 131 HLADGEIN---HRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAP 207 (1045)
Q Consensus 131 ~~~~~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~ 207 (1045)
+++.+++. +.+++|+|||++++|+++||+|||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.++
T Consensus 105 ~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K~~~ 180 (884)
T TIGR01522 105 EKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSKVTA 180 (884)
T ss_pred HHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceecccc
Confidence 88876664 567999999999999999999999999999999999999999865 88999999999999999986
Q ss_pred CCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhc
Q psy15803 208 NETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNA 287 (1045)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~ 287 (1045)
+...+. ..+..+.....|+||.+.+|. +.++|++||.+|.+|++.
T Consensus 181 ~~~~~~-------------~~~~~~~~n~v~~GT~v~~G~----------------------~~~~V~~tG~~T~~gki~ 225 (884)
T TIGR01522 181 PIPAAT-------------NGDLAERSNIAFMGTLVRCGH----------------------GKGIVVGTGSNTEFGAVF 225 (884)
T ss_pred cccccc-------------cccccccCceEEeCCEEEeee----------------------EEEEEEEecCccHHHHHH
Confidence 532110 011122233448888888777 689999999999999886
Q ss_pred c---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhh
Q psy15803 288 T---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQ 364 (1045)
Q Consensus 288 ~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~ 364 (1045)
+ .....++++++.++++..++.++.++++++.+++.++. ..++...+..++++++++|||+||
T Consensus 226 ~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~v~llv~aiP~~Lp 291 (884)
T TIGR01522 226 KMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ--------------GKDWLEMFTISVSLAVAAIPEGLP 291 (884)
T ss_pred HHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------cCCHHHHHHHHHHHHHHHccchHH
Confidence 5 45566899999999999988777665555444433211 113455788899999999999999
Q ss_pred hhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccC----CCC
Q psy15803 365 VTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVP----NFN 440 (1045)
Q Consensus 365 v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~----~~~ 440 (1045)
++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|++++++..+..+.. ...
T Consensus 292 ~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~ 361 (884)
T TIGR01522 292 IIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLN 361 (884)
T ss_pred HHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccC
Confidence 99999999999988 8899999999999999999999999999999999999999876532210 000
Q ss_pred C-chhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeec------------------------------CCceeecccCCC
Q psy15803 441 S-NNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSV------------------------------AGNILVPNFNSN 489 (1045)
Q Consensus 441 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~------------------------------~~~~l~~~f~~~ 489 (1045)
. ......... .+....+...+++.+.++||+...+ ...+-.+||+++
T Consensus 362 ~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~ 439 (884)
T TIGR01522 362 QFGEVIVDGDV--LHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSE 439 (884)
T ss_pred CCCcccccccc--cccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCC
Confidence 0 000000000 0000011122233333333332110 001124577777
Q ss_pred CcccceEEEEec--------------------------------------------------------------------
Q psy15803 490 NVKEQSRMIARN-------------------------------------------------------------------- 501 (1045)
Q Consensus 490 ~~~~~~svi~~~-------------------------------------------------------------------- 501 (1045)
+ |+|++++..
T Consensus 440 ~--k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~~~l 517 (884)
T TIGR01522 440 R--KWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQL 517 (884)
T ss_pred C--CeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCCe
Confidence 7 777665432
Q ss_pred ------CCCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHh
Q psy15803 502 ------PSIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELC 567 (1045)
Q Consensus 502 ------~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~ 567 (1045)
...|++|++.+++++.|+++|+++.|.| ++++.+|+.... ..+++|++++.+.++++++.+.+
T Consensus 518 ~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~-~~~v~g~~l~~~~~~~l~~~~~~-- 594 (884)
T TIGR01522 518 TFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT-SQSVSGEKLDAMDDQQLSQIVPK-- 594 (884)
T ss_pred EEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-CceeEhHHhHhCCHHHHHHHhhc--
Confidence 1123556677788888888888866655 569999987543 34789999998887777665543
Q ss_pred hcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc--cCchhhhhhhccccccchhhhHHHH
Q psy15803 568 LTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI--SGVEGLQAACASDYSIGQFRFLLKL 645 (1045)
Q Consensus 568 ~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi--~g~e~a~~a~~~~~~~~~f~~l~~l 645 (1045)
..||||++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++ +|+|++++++|+++++++|+.|.++
T Consensus 595 ----~~Vfar~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~ 669 (884)
T TIGR01522 595 ----VAVFARASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSA 669 (884)
T ss_pred ----CeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHH
Confidence 4599999999999999999998 99999999999999999999999966 6899999999999999999999999
Q ss_pred HHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcC
Q psy15803 646 LFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKY 725 (1045)
Q Consensus 646 ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~ 725 (1045)
+ .+||.+|+|+++++.|.++.|+...++.+++.++.. ..++++++++|+|++++.+|+++++..+ .+.+.+.+.
T Consensus 670 i-~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~---~~pl~~~qiL~inl~~d~~~a~~l~~e~--~~~~~m~~~ 743 (884)
T TIGR01522 670 I-EEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGF---PNPLNAMQILWINILMDGPPAQSLGVEP--VDKDVMRKP 743 (884)
T ss_pred H-HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcC---CCchhHHHHHHHHHHHHhhHHHHhccCC--CChhHhhCC
Confidence 8 999999999999999999999998877766665532 3689999999999999999999998622 234444444
Q ss_pred CcccccccCcccHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy15803 726 PILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPMLI 762 (1045)
Q Consensus 726 p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~ 762 (1045)
|+ .++.++++.+.+..|++.|+++.++.++..++.
T Consensus 744 P~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 778 (884)
T TIGR01522 744 PR--PRNDKILTKDLIKKILVSAIIIVVGTLFVFVRE 778 (884)
T ss_pred CC--CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 477889999999999999999988776655443
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-75 Score=722.55 Aligned_cols=582 Identities=17% Similarity=0.185 Sum_probs=449.4
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHh
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH 131 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~ 131 (1045)
+..+||.|.++..|.+. +++.+++||.++++++++++++++++ .+.|..++.++++++++++...+++++.+
T Consensus 42 r~~~~G~N~l~~~~~~~---~~~~~~~~~~~p~~~iL~~~a~ls~~-----~~~~~~~~iI~~iv~~~~~i~~~~e~~a~ 113 (867)
T TIGR01524 42 RLAEFGPNQTVEEKKVP---NLRLLIRAFNNPFIYILAMLMGVSYL-----TDDLEATVIIALMVLASGLLGFIQESRAE 113 (867)
T ss_pred HHHhcCCCcCCCCCCCC---HHHHHHHHHhhHHHHHHHHHHHHHHH-----HhhHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 45789999999887653 35677999999999999999999988 56788888899999999999999999987
Q ss_pred hhhhh---hcccEEEEEE------CCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccE
Q psy15803 132 LADGE---INHRSVDVIR------NGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLK 202 (1045)
Q Consensus 132 ~~~~~---~n~~~~~V~r------~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~ 202 (1045)
++.+. +.+.+++|+| ||++++|+++||+|||+|.|++||.|||||+|+++++ +.||||+|||||.|+
T Consensus 114 ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES~PV 189 (867)
T TIGR01524 114 RAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGESLPV 189 (867)
T ss_pred HHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCCCcc
Confidence 76654 4567799999 9999999999999999999999999999999999865 899999999999999
Q ss_pred eecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcch
Q psy15803 203 VRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSK 282 (1045)
Q Consensus 203 ~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~ 282 (1045)
.|.+++..... . +..+.....|+||.+.+|. +.++|++||.+|.
T Consensus 190 ~K~~~~~~~~~---~-----------~~~~~~n~vfaGT~v~~G~----------------------~~~~V~~tG~~T~ 233 (867)
T TIGR01524 190 EKFVEDKRARD---P-----------EILERENLCFMGTNVLSGH----------------------AQAVVLATGSSTW 233 (867)
T ss_pred cccCCcccccc---c-----------cccccccceecCCeEEEeE----------------------EEEEEEEEcCccH
Confidence 99887532100 0 0011122337788777777 6899999999999
Q ss_pred hhhhccC--CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhcccc
Q psy15803 283 LMKNATS--APLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIP 360 (1045)
Q Consensus 283 ~~~~~~~--~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP 360 (1045)
+|++.+. .+.+++++++.++++..++..+.+++++++++++.+.. .++...+..++++++.+||
T Consensus 234 ~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~~~al~l~v~~iP 299 (867)
T TIGR01524 234 FGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK--------------GDWLEAFLFALAVAVGLTP 299 (867)
T ss_pred HHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc--------------CCHHHHHHHHHHHHHHhCc
Confidence 9998762 25556889999999999998888887777665543210 1344578889999999999
Q ss_pred chhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCC
Q psy15803 361 ISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFN 440 (1045)
Q Consensus 361 ~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~ 440 (1045)
|+||++++++...++.++ +++++++|+++.+|+||++++||||||||||+|+|++.++..... ..
T Consensus 300 ~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-----~~ 364 (867)
T TIGR01524 300 EMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-----ET 364 (867)
T ss_pred chHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-----CC
Confidence 999999999999999988 889999999999999999999999999999999999998753211 01
Q ss_pred CchhHhhhhhhcC--CCCchHHHHHHHHHHhhceeee--ecCCceeecccCCCC--------------------------
Q psy15803 441 SNNVQEQSRMIAR--NPSIEPVVREFLTMLAVCHTVC--SVAGNILVPNFNSNN-------------------------- 490 (1045)
Q Consensus 441 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~c~~v~--~~~~~~l~~~f~~~~-------------------------- 490 (1045)
...+.....+... ....++....+........... .....+-..||++++
T Consensus 365 ~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il 444 (867)
T TIGR01524 365 SERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEML 444 (867)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHH
Confidence 1112221111100 0001222222222111000000 000000011222222
Q ss_pred -------------------------------------------------------cccceEEEEecCCCCchhHHHHHHH
Q psy15803 491 -------------------------------------------------------VKEQSRMIARNPSIEPVVREFLTML 515 (1045)
Q Consensus 491 -------------------------------------------------------~~~~~svi~~~~~~~~~~~~~~~ti 515 (1045)
.++++.+++.....||+|++.+++|
T Consensus 445 ~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI 524 (867)
T TIGR01524 445 TVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAI 524 (867)
T ss_pred HhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHH
Confidence 0123334444444668889999999
Q ss_pred HHHHHHhhhhhhHH--------HHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHH
Q psy15803 516 AVCHTVYIELKHRT--------ALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVV 587 (1045)
Q Consensus 516 ~~~~~~~~~~~~~~--------~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV 587 (1045)
+.|+++|+++.|.| ++|+.+|+..+ -+++|.+++.+.++++.+.+.+ ..||||++|+||.++|
T Consensus 525 ~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~---~v~~g~~l~~~~~~el~~~~~~------~~vfAr~~Pe~K~~iV 595 (867)
T TIGR01524 525 AALFKNGINVKVLTGDNEIVTARICQEVGIDAN---DFLLGADIEELSDEELARELRK------YHIFARLTPMQKSRII 595 (867)
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CeeecHhhhhCCHHHHHHHhhh------CeEEEECCHHHHHHHH
Confidence 99999999987766 66999999753 3789999998877776665544 3399999999999999
Q ss_pred HHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeeh
Q psy15803 588 ELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFY 666 (1045)
Q Consensus 588 ~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~ 666 (1045)
+.+|++ |++|+|+|||+||+|||++|||||++ +|+|++++++|+++++++|..|.+++ .+||.+|+|+++++.|.+.
T Consensus 596 ~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai-~~gR~i~~ni~k~i~~~ls 673 (867)
T TIGR01524 596 GLLKKA-GHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGV-IEGRNTFGNILKYLKMTAS 673 (867)
T ss_pred HHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 999999 99999999999999999999999976 68999999999999999999999999 8999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcc
Q psy15803 667 KNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPIL 728 (1045)
Q Consensus 667 ~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~l 728 (1045)
.|+..++..++..++.+ ..|+.+.|++|.|++++ +|.+++|.... +...|+.|+.
T Consensus 674 ~n~~~~~~~~~~~~~~~---~~pl~~~qil~inl~~d-~~~~al~~~~~---~~~~m~~p~~ 728 (867)
T TIGR01524 674 SNFGNVFSVLVASAFIP---FLPMLSLHLLIQNLLYD-FSQLTLPWDKM---DREFLKKPHQ 728 (867)
T ss_pred hhHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHH-HHHHhhcCCCC---ChHhhCCCCC
Confidence 99998888777666643 25899999999999999 79999885333 3345566664
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-75 Score=712.34 Aligned_cols=592 Identities=18% Similarity=0.208 Sum_probs=462.1
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHh
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH 131 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~ 131 (1045)
+.++||.|.++..+.++ ++.|++||.+++++.++++++++++ .+.|..++.+++++++++..++++++++.
T Consensus 10 r~~~~G~N~~~~~~~~~----~~~~~~~~~~~~~~lL~~aa~~s~~-----~~~~~~~~~i~~~~~i~~~i~~~qe~~a~ 80 (755)
T TIGR01647 10 RLAKYGPNELPEKKVSP----LLKFLGFFWNPLSWVMEAAAIIAIA-----LENWVDFVIILGLLLLNATIGFIEENKAG 80 (755)
T ss_pred HHHhcCCCCCCCCCCCH----HHHHHHHHhchHHHHHHHHHHHHHh-----hcchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 35789999999866654 3667899999999999999999988 56788888899999999999999999999
Q ss_pred hhhhhh---cccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCC
Q psy15803 132 LADGEI---NHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208 (1045)
Q Consensus 132 ~~~~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~ 208 (1045)
++.+.+ .+.+++|+|||++++|+++||+|||+|.|++||.|||||+|+++++ +.||||+|||||.|+.|.+++
T Consensus 81 ~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~~~~ 156 (755)
T TIGR01647 81 NAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKKTGD 156 (755)
T ss_pred HHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEeccCC
Confidence 877655 4677999999999999999999999999999999999999999765 899999999999999998765
Q ss_pred CCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc
Q psy15803 209 ETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT 288 (1045)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~ 288 (1045)
.. |+||.+.+|. +.++|++||.+|.+|++.+
T Consensus 157 ~v---------------------------~aGT~v~~G~----------------------~~~~V~~tG~~T~~g~i~~ 187 (755)
T TIGR01647 157 IA---------------------------YSGSTVKQGE----------------------AEAVVTATGMNTFFGKAAA 187 (755)
T ss_pred ee---------------------------eccCEEEccE----------------------EEEEEEEcCCccHHHHHHH
Confidence 54 9999999998 6899999999999998765
Q ss_pred ---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhhh
Q psy15803 289 ---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQV 365 (1045)
Q Consensus 289 ---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v 365 (1045)
.++.+++++++.++++..++.++.++++++.++++.+.. ..++...+..++++++.+|||+||+
T Consensus 188 lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-------------~~~~~~~~~~~i~vlv~a~P~~Lp~ 254 (755)
T TIGR01647 188 LVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR-------------GESFREGLQFALVLLVGGIPIAMPA 254 (755)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------------CCCHHHHHHHHHHHHHHhCCcchHH
Confidence 556667899999999999999888888877776654311 1235567889999999999999999
Q ss_pred hHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCchhH
Q psy15803 366 TLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQ 445 (1045)
Q Consensus 366 ~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~ 445 (1045)
+++++...++.++ +++++++|+++.+|+||.+|+||||||||||+|+|++.+++..+..+ ....+.
T Consensus 255 ~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~----~~~~~l 320 (755)
T TIGR01647 255 VLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF----DKDDVL 320 (755)
T ss_pred HHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC----CHHHHH
Confidence 9999999999988 88999999999999999999999999999999999999998653211 122222
Q ss_pred hhhhhhcCCCCchHHHHHHHHHHhh----c--eeeeecCCceeecccCCCC-----------------------------
Q psy15803 446 EQSRMIARNPSIEPVVREFLTMLAV----C--HTVCSVAGNILVPNFNSNN----------------------------- 490 (1045)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~l~~----c--~~v~~~~~~~l~~~f~~~~----------------------------- 490 (1045)
....+.......++....+...... + +... -..||++.+
T Consensus 321 ~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~------~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~ 394 (755)
T TIGR01647 321 LYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVL------EFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDL 394 (755)
T ss_pred HHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceE------EEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHh
Confidence 2211111111113333333322110 0 0000 011222211
Q ss_pred --------------------------------cccceEEEEecCCCCchhHHHHHHHHHHHHHhhhhhhHH--------H
Q psy15803 491 --------------------------------VKEQSRMIARNPSIEPVVREFLTMLAVCHTVYIELKHRT--------A 530 (1045)
Q Consensus 491 --------------------------------~~~~~svi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~ 530 (1045)
.++++.+++.....||+|++.+++++.|+++|+++.|.| +
T Consensus 395 c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~ 474 (755)
T TIGR01647 395 CDNKKEIEEKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKE 474 (755)
T ss_pred cCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 002233444444567999999999999999999977766 6
Q ss_pred HHHHcCCCCCC--ceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccCh
Q psy15803 531 LASLLGTTNNN--YALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDV 608 (1045)
Q Consensus 531 ~~~~lG~~~~~--~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~ 608 (1045)
+|+.+|+.... ...+.+|++++.+.++++.+.+.+. .||||++|+||.++|+.+|++ |++|+|+|||+||+
T Consensus 475 IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDa 547 (755)
T TIGR01647 475 TARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDA------DGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDA 547 (755)
T ss_pred HHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhC------CEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccH
Confidence 69999997531 0112233333445555555554443 299999999999999999998 99999999999999
Q ss_pred HHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcc
Q psy15803 609 AMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQ 687 (1045)
Q Consensus 609 ~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~ 687 (1045)
|||++|||||++ +|+|++++++|+++++++|..|.+++ ..||.+|+|+++++.|.+..|+...+..++..++.++
T Consensus 548 pAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai-~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~--- 623 (755)
T TIGR01647 548 PALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAI-LESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF--- 623 (755)
T ss_pred HHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHH-HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---
Confidence 999999999977 68999999999999999999999999 8999999999999999999999988777776666665
Q ss_pred hhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHH-HHHHHHHHHHHHHHHHHhhhhc
Q psy15803 688 VLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIF-WIWIGNALFHSMLMFWIPMLIY 763 (1045)
Q Consensus 688 ~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f-~~~~~~~~~~s~~~~~~~~~~~ 763 (1045)
+ +.+++++|.|++.+. |.++++....+.+ +.|+. |+.+.. ...+..|++.++..|++.++.+
T Consensus 624 ~-l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 686 (755)
T TIGR01647 624 Y-FPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLPQR-------WNLREVFTMSTVLGIYLVISTFLLLAIAL 686 (755)
T ss_pred c-hhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCCCc-------cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 899999999999995 6888876554422 34432 223333 3356788888887777766655
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-74 Score=717.87 Aligned_cols=600 Identities=15% Similarity=0.160 Sum_probs=448.7
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhcccccc------ccCCcchhhhHHHHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVS------PTGRYTTLIPLILIMVVSGIKEII 125 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~------~~~~~~~~~~l~~i~~i~~i~~~~ 125 (1045)
+..+||.|.++..|.+. +++.|++||++++++.++++++++++.... ..+.|..++.++++++++++.+++
T Consensus 54 rl~~~G~N~l~~~~~~~---~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~ 130 (903)
T PRK15122 54 RLQRYGPNEVAHEKPPH---ALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFW 130 (903)
T ss_pred HHHhcCCCCCCCCCCCC---HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHH
Confidence 46789999999877553 246678999999999999999999875311 113567888899999999999999
Q ss_pred HHHHHhhhhhhh---cccEEEEEECC------eEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCC
Q psy15803 126 EDIKRHLADGEI---NHRSVDVIRNG------MIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLD 196 (1045)
Q Consensus 126 ~~~~~~~~~~~~---n~~~~~V~r~g------~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~Lt 196 (1045)
+++++.++.+.+ .+.+++|+||| ++++|+++||+|||+|.|++||.|||||+|+++++ +.||||+||
T Consensus 131 qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LT 206 (903)
T PRK15122 131 QEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQAVLT 206 (903)
T ss_pred HHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEccccC
Confidence 999998776555 45679999994 89999999999999999999999999999999765 889999999
Q ss_pred cccccEeecCCCCC-----CCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEE
Q psy15803 197 GETNLKVRQAPNET-----SSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWII 271 (1045)
Q Consensus 197 GEs~p~~K~~~~~~-----~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~ 271 (1045)
|||.|+.|.+.+.. .......+ .+..+.....|+||.+.+|. +.
T Consensus 207 GES~PV~K~~~~~~~~~~~~~~~~~~~---------~~~~~~~n~vfaGT~V~~G~----------------------~~ 255 (903)
T PRK15122 207 GEALPVEKYDTLGAVAGKSADALADDE---------GSLLDLPNICFMGTNVVSGT----------------------AT 255 (903)
T ss_pred CCCcceeeecccccccccccccccccc---------CCcccccceEEeCCEEEeee----------------------EE
Confidence 99999999862110 00000000 00001122337777777776 78
Q ss_pred EEEEEecCcchhhhhccCC--CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHH
Q psy15803 272 GIVVYTGPDSKLMKNATSA--PLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLL 349 (1045)
Q Consensus 272 ~iV~~tG~~T~~~~~~~~~--~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (1045)
++|++||.+|.+|++.+.. +..++++++.++++..++..+.++++.+.+++..+. ..++...+.
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~--------------~~~~~~~l~ 321 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT--------------KGDWLEALL 321 (903)
T ss_pred EEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--------------cCCHHHHHH
Confidence 9999999999999988733 445678999999998887777666665554443221 123455788
Q ss_pred HHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEE
Q psy15803 350 TFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICS 429 (1045)
Q Consensus 350 ~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~ 429 (1045)
.++++++.+|||+||++++++.+.++.++ +++++++|+.+.+|+||++++||||||||||+|+|++.+++
T Consensus 322 ~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~ 391 (903)
T PRK15122 322 FALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL 391 (903)
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE
Confidence 89999999999999999999999999988 88999999999999999999999999999999999999976
Q ss_pred EcCccccCCCCCchhHhhhhhhcCC--CCchHHHHHHHHHHhhce-eeee-cCCceeecccCCCC---------------
Q psy15803 430 VAGNILVPNFNSNNVQEQSRMIARN--PSIEPVVREFLTMLAVCH-TVCS-VAGNILVPNFNSNN--------------- 490 (1045)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~c~-~v~~-~~~~~l~~~f~~~~--------------- 490 (1045)
..+.. .+..+.....+...+ ...++....++....... .... ....+-.+||++.+
T Consensus 392 ~~~~~-----~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~ 466 (903)
T PRK15122 392 DVSGR-----KDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHL 466 (903)
T ss_pred cCCCC-----ChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEE
Confidence 32210 111222211111100 011222222222111000 0000 00000011111111
Q ss_pred --------------------------------------------------------------------cccceEEEEecC
Q psy15803 491 --------------------------------------------------------------------VKEQSRMIARNP 502 (1045)
Q Consensus 491 --------------------------------------------------------------------~~~~~svi~~~~ 502 (1045)
.++++.+++...
T Consensus 467 ~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~ 546 (903)
T PRK15122 467 LICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLT 546 (903)
T ss_pred EEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEe
Confidence 012334445555
Q ss_pred CCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEE
Q psy15803 503 SIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVI 574 (1045)
Q Consensus 503 ~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv 574 (1045)
..||+|++.+++|+.|+++|+++.|.| ++|+.+|+..+ .+++|.+++.+.++++.+.+.+. .|
T Consensus 547 l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~---~vi~G~el~~~~~~el~~~v~~~------~V 617 (903)
T PRK15122 547 FLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG---EPLLGTEIEAMDDAALAREVEER------TV 617 (903)
T ss_pred ccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CccchHhhhhCCHHHHHHHhhhC------CE
Confidence 567999999999999999999987766 66999999643 48999999999888777666553 39
Q ss_pred EEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchh
Q psy15803 575 CCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWN 653 (1045)
Q Consensus 575 ~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~ 653 (1045)
|||++|+||.++|+.+|++ |++|+|+|||+||+|||++|||||++ +|+|+|++++|+++++++|..|++++ .+||.+
T Consensus 618 fAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai-~~gR~i 695 (903)
T PRK15122 618 FAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGV-IKGRET 695 (903)
T ss_pred EEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHH-HHHHHH
Confidence 9999999999999999998 99999999999999999999999966 69999999999999999999999999 899999
Q ss_pred hhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCccccccc
Q psy15803 654 YNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTA 733 (1045)
Q Consensus 654 ~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~ 733 (1045)
|+|+++++.|.+..|+..++..++..++.+ ..|+.+.|++|.|++++. |.+++|....+ .+. |+.|+. .+.
T Consensus 696 ~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~---~~pl~~~qil~~nli~D~-~~lal~~d~~~--~~~-m~~P~~--~~~ 766 (903)
T PRK15122 696 FGNIIKYLNMTASSNFGNVFSVLVASAFIP---FLPMLAIHLLLQNLMYDI-SQLSLPWDKMD--KEF-LRKPRK--WDA 766 (903)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhc---cchhHHHHHHHHHHHHHH-HHHhhcCCCCC--Hhh-cCCCCC--CCh
Confidence 999999999999999988887776666543 357899999999999995 88888753332 333 466653 445
Q ss_pred CcccH
Q psy15803 734 NTFNV 738 (1045)
Q Consensus 734 ~~~~~ 738 (1045)
++++.
T Consensus 767 ~~~~~ 771 (903)
T PRK15122 767 KNIGR 771 (903)
T ss_pred hhhHH
Confidence 55554
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-73 Score=717.11 Aligned_cols=613 Identities=19% Similarity=0.169 Sum_probs=463.9
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHh
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH 131 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~ 131 (1045)
+..+||.|.+..++.++ ++.|++||.+|++++++++.+++++ .++|.+++.++++++++.+...+++++..
T Consensus 148 r~~~yG~N~i~~~~~s~----~~ll~~~~~~p~~i~~i~~~~l~~~-----~~~~~~~~~i~~i~~~~~~~~~~~~~k~~ 218 (1054)
T TIGR01657 148 RKAKYGKNEIEIPVPSF----LELLKEEVLHPFYVFQVFSVILWLL-----DEYYYYSLCIVFMSSTSISLSVYQIRKQM 218 (1054)
T ss_pred HHHhcCCCeeecCCCCH----HHHHHHHHhchHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34679999999877554 4677999999999999888888776 46778888888999999999999999998
Q ss_pred hhhhhhc--ccEEEEEECCeEEEEeecccccCeEEEec--CCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCC
Q psy15803 132 LADGEIN--HRSVDVIRNGMIYVEQWKDLKVGDIVKVY--NNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAP 207 (1045)
Q Consensus 132 ~~~~~~n--~~~~~V~r~g~~~~i~~~~l~vGDIV~l~--~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~ 207 (1045)
++.+++. +..++|+|||++++|+++||+|||||.|+ +|+.|||||+|++|+ |.||||+|||||.|+.|.+.
T Consensus 219 ~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-----~~VdES~LTGES~Pv~K~~~ 293 (1054)
T TIGR01657 219 QRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-----CIVNESMLTGESVPVLKFPI 293 (1054)
T ss_pred HHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-----EEEecccccCCccceecccC
Confidence 8887764 45799999999999999999999999999 999999999999863 99999999999999999886
Q ss_pred CCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeec------CcEEEEEEEEecCcc
Q psy15803 208 NETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRN------TAWIIGIVVYTGPDS 281 (1045)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~n------t~~~~~iV~~tG~~T 281 (1045)
+.... +... +... +.+.+|++++||.+.. .+.+.|+|++||.+|
T Consensus 294 ~~~~~--~~~~-------~~~~---------------------~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T 343 (1054)
T TIGR01657 294 PDNGD--DDED-------LFLY---------------------ETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFST 343 (1054)
T ss_pred Ccccc--cccc-------cccc---------------------ccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccc
Confidence 43100 0000 0001 1123344444444442 234899999999999
Q ss_pred hhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhcc
Q psy15803 282 KLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNL 358 (1045)
Q Consensus 282 ~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 358 (1045)
..|++.+ .++.+.+++++...+++.+++.+.++.+++.++.. +.. +.++...+++++.+++++
T Consensus 344 ~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~~-------------~~~~~~~~l~~l~iiv~~ 409 (1054)
T TIGR01657 344 SKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IKD-------------GRPLGKIILRSLDIITIV 409 (1054)
T ss_pred cchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHc-------------CCcHHHHHHHHHHHHHhh
Confidence 8888876 34455677888887777665554443333222211 110 124556889999999999
Q ss_pred ccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCC
Q psy15803 359 IPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPN 438 (1045)
Q Consensus 359 iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~ 438 (1045)
||++||++++++..++..++ ++++++||++..+|.+|+|+++|||||||||+|+|+|.+++..+.....
T Consensus 410 vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~- 478 (1054)
T TIGR01657 410 VPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEF- 478 (1054)
T ss_pred cCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccc-
Confidence 99999999999999999999 8899999999999999999999999999999999999999865421100
Q ss_pred CCCchhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCC---------------------------------------
Q psy15803 439 FNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAG--------------------------------------- 479 (1045)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~--------------------------------------- 479 (1045)
.....+ .. ......+..+++.||+....++
T Consensus 479 --~~~~~~-------~~--~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 547 (1054)
T TIGR01657 479 --LKIVTE-------DS--SLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDD 547 (1054)
T ss_pred --cccccc-------cc--ccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccC
Confidence 000000 00 0112234455667775432110
Q ss_pred ------ceeecccCCCCcccceEEEEecCCCC------------------------------------------------
Q psy15803 480 ------NILVPNFNSNNVKEQSRMIARNPSIE------------------------------------------------ 505 (1045)
Q Consensus 480 ------~~l~~~f~~~~~~~~~svi~~~~~~~------------------------------------------------ 505 (1045)
.+-.+||+|++ |||+++++...++
T Consensus 548 ~~~~~~il~~~pF~S~~--krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~l 625 (1054)
T TIGR01657 548 PPQELSIIRRFQFSSAL--QRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKEL 625 (1054)
T ss_pred CCceEEEEEEEeecCCC--CEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEeec
Confidence 01257999999 9999998753210
Q ss_pred ------------------------------chhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCC------
Q psy15803 506 ------------------------------PVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNN------ 541 (1045)
Q Consensus 506 ------------------------------~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~------ 541 (1045)
+++++.+++|+.++++|+++.|.| ++|+.+|+...+
T Consensus 626 ~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~ 705 (1054)
T TIGR01657 626 PKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILA 705 (1054)
T ss_pred CccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEe
Confidence 233355567888888888877766 568999974321
Q ss_pred ----------------------------------------------ceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEE
Q psy15803 542 ----------------------------------------------YALIIDGLALDYALKHELRKDFLELCLTCNAVIC 575 (1045)
Q Consensus 542 ----------------------------------------------~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~ 575 (1045)
..++++|++++.+... ..+.+.++..++ .||
T Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~--~Vf 782 (1054)
T TIGR01657 706 EAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHT--TVF 782 (1054)
T ss_pred ecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcC--eEE
Confidence 1378999999875431 122344444444 499
Q ss_pred EecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHHhhcchhhh
Q psy15803 576 CRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYN 655 (1045)
Q Consensus 576 ~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~ 655 (1045)
||++|+||.++|+.+|+. |++|+|+|||+||+||||+|||||+++++|++ .||+.++.+++|+.+.+++ .+||.++.
T Consensus 783 AR~sP~qK~~iV~~lq~~-g~~V~m~GDG~ND~~ALK~AdVGIam~~~das-~AA~f~l~~~~~~~I~~~I-~eGR~~l~ 859 (1054)
T TIGR01657 783 ARMAPDQKETLVELLQKL-DYTVGMCGDGANDCGALKQADVGISLSEAEAS-VAAPFTSKLASISCVPNVI-REGRCALV 859 (1054)
T ss_pred EecCHHHHHHHHHHHHhC-CCeEEEEeCChHHHHHHHhcCcceeeccccce-eecccccCCCcHHHHHHHH-HHHHHHHH
Confidence 999999999999999998 99999999999999999999999999888877 7789999999999999999 79999999
Q ss_pred hhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCc
Q psy15803 656 RMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANT 735 (1045)
Q Consensus 656 ~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~ 735 (1045)
++.++++|.+..+++..+..+... +.+ .++.++|++|+|++++++|+++++. +.+...+++.|+ ..++
T Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~----~~l~~~Q~l~i~li~~~~~~l~l~~---~~p~~~l~~~~P----~~~l 927 (1054)
T TIGR01657 860 TSFQMFKYMALYSLIQFYSVSILY-LIG----SNLGDGQFLTIDLLLIFPVALLMSR---NKPLKKLSKERP----PSNL 927 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-Hcc----CcCccHHHHHHHHHHHHHHHHHHHc---CCchhhcCCCCC----Cccc
Confidence 999999999999987755543322 222 5678999999999999999999985 334556666654 3689
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy15803 736 FNVKIFWIWIGNALFHSMLMFWIPMLIYG 764 (1045)
Q Consensus 736 ~~~~~f~~~~~~~~~~s~~~~~~~~~~~~ 764 (1045)
++...+...++.++++.+..++..++...
T Consensus 928 ~~~~~~~si~~q~~i~~~~~~~~~~~~~~ 956 (1054)
T TIGR01657 928 FSVYILTSVLIQFVLHILSQVYLVFELHA 956 (1054)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999888777766543
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-73 Score=638.86 Aligned_cols=622 Identities=19% Similarity=0.219 Sum_probs=497.9
Q ss_pred CCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccc---cc-----cCCcchhhhHHHHHHHHHHHHHH
Q psy15803 54 CKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDV---SP-----TGRYTTLIPLILIMVVSGIKEII 125 (1045)
Q Consensus 54 ~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~---~~-----~~~~~~~~~l~~i~~i~~i~~~~ 125 (1045)
.+-|+|..+.+|-+. =+..|..|++..+.+.+++.++++++... +. ....+..+.|..+++++.+..++
T Consensus 69 ~rdG~NaL~Ppk~t~---~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~ 145 (1019)
T KOG0203|consen 69 ARDGPNALTPPKTTP---EWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYY 145 (1019)
T ss_pred ccCCCCCCCCCCCCh---HHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCc
Confidence 567999999999876 33456788889999999999998876321 11 12344567788888888899999
Q ss_pred HHHHHhhhh---hhhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccE
Q psy15803 126 EDIKRHLAD---GEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLK 202 (1045)
Q Consensus 126 ~~~~~~~~~---~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~ 202 (1045)
|+.+..+.. +.+-+..++|+|||....+..++|+|||+|.++-||+||||++++++.+ |+||+|+|||||.|.
T Consensus 146 qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGesEP~ 221 (1019)
T KOG0203|consen 146 QEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGESEPQ 221 (1019)
T ss_pred cchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccccccCCc
Confidence 998887654 5666788999999999999999999999999999999999999999987 999999999999999
Q ss_pred eecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcch
Q psy15803 203 VRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSK 282 (1045)
Q Consensus 203 ~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~ 282 (1045)
.+.+...........++. |.+|..++|. .+|+|++||.+|.
T Consensus 222 ~~~~~~t~~~~~Et~Ni~-----------------f~st~~veG~----------------------~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 222 TRSPEFTHENPLETRNIA-----------------FFSTNCVEGT----------------------GRGIVIATGDRTV 262 (1019)
T ss_pred cCCccccccCchhheeee-----------------eeeeEEecce----------------------EEEEEEecCCceE
Confidence 998765443333344444 8888888887 6899999999999
Q ss_pred hhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccc
Q psy15803 283 LMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLI 359 (1045)
Q Consensus 283 ~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~i 359 (1045)
+|+++. .....++++++.+++++.++...++++.+..|++..+.. ..+..++..++.+++..+
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g--------------y~~l~avv~~i~iivAnv 328 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG--------------YEWLRAVVFLIGIIVANV 328 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc--------------chhHHHhhhhheeEEecC
Confidence 999987 446788999999999999999999988888887766541 134556667899999999
Q ss_pred cchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCC
Q psy15803 360 PISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNF 439 (1045)
Q Consensus 360 P~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~ 439 (1045)
|.+|+++++.+...-+++| +++++++|++.+.|.||..++||+|||||||+|.|+|.++|.++.....+.
T Consensus 329 PeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~ 398 (1019)
T KOG0203|consen 329 PEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADT 398 (1019)
T ss_pred cCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeec
Confidence 9999999999999999999 889999999999999999999999999999999999999999876554322
Q ss_pred CCchhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCCce--------------------------------------
Q psy15803 440 NSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAGNI-------------------------------------- 481 (1045)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~~~-------------------------------------- 481 (1045)
..... -. .....++....+.++..+|+......++.
T Consensus 399 ~~~~~-----~~-~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~k 472 (1019)
T KOG0203|consen 399 TEDQS-----GQ-SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPK 472 (1019)
T ss_pred hhhhh-----cc-cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHH
Confidence 11000 00 00111344566677777887765544211
Q ss_pred -eecccCCCCcccceEEE--------------------------------------------------------------
Q psy15803 482 -LVPNFNSNNVKEQSRMI-------------------------------------------------------------- 498 (1045)
Q Consensus 482 -l~~~f~~~~~~~~~svi-------------------------------------------------------------- 498 (1045)
-..||+|.+ |-.-.+
T Consensus 473 v~eipfNSt~--Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlg 550 (1019)
T KOG0203|consen 473 VAEIPFNSTN--KYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLG 550 (1019)
T ss_pred hhcCCccccc--ceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHH
Confidence 045666655 211111
Q ss_pred --------------------------------EecCCCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCC
Q psy15803 499 --------------------------------ARNPSIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTT 538 (1045)
Q Consensus 499 --------------------------------~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~ 538 (1045)
+....-||+|...+++++.|+.+|+++.|.+ ++|+.+|+.
T Consensus 551 F~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi 630 (1019)
T KOG0203|consen 551 FCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGII 630 (1019)
T ss_pred HHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeee
Confidence 1111122555566688999999999966654 557777721
Q ss_pred -----------------------CCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCC
Q psy15803 539 -----------------------NNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTN 595 (1045)
Q Consensus 539 -----------------------~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g 595 (1045)
....+.|++|.+|..+.++++.+ +..+...+||||.||+||..||+..|+. |
T Consensus 631 ~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~----il~nh~eIVFARTSPqQKLiIVe~cQr~-G 705 (1019)
T KOG0203|consen 631 SEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDE----LLQNHQEIVFARTSPQQKLIIVEGCQRQ-G 705 (1019)
T ss_pred cCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHH----HHHhCCceEEEecCccceEEeEhhhhhc-C
Confidence 12367899999999988766654 4556788999999999999999999999 9
Q ss_pred CEEEEecCCccChHHHHhccccc--cccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHH
Q psy15803 596 SVTLAIGDGANDVAMIQKAHVGV--GISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYV 673 (1045)
Q Consensus 596 ~~v~~iGDG~ND~~al~~AdVGi--gi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~ 673 (1045)
.+|+.+|||+||+||||+||||| |++|+|++++|+|+++++|||++|+..+ .+||.+|+|++|.|.|++++|+..+.
T Consensus 706 aiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGV-EEGRLiFDNLKKsIAYTLTsNipEI~ 784 (1019)
T KOG0203|consen 706 AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGV-EEGRLIFDNLKKSIAYTLTSNIPEIT 784 (1019)
T ss_pred cEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeec-ccceehhhhHHHHHHHHHHhcchhHh
Confidence 99999999999999999999999 7899999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHH-HHHHHHHHH
Q psy15803 674 MELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWI-WIGNALFHS 752 (1045)
Q Consensus 674 ~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~-~~~~~~~~s 752 (1045)
|.++|.++. ++ .++....++++.+..+++|++.+++... .+++|.+.|+ .++.+++.|.+.+.. |+..|++|+
T Consensus 785 PfL~fi~~g-iP--LplgtitIL~IDLgTDmvPAiSLAYE~a--EsDIM~r~PR-~p~~D~LVN~rLi~~aY~qIG~iqa 858 (1019)
T KOG0203|consen 785 PFLLFILFG-IP--LPLGTVTILCIDLGTDIVPAISLAYEKA--ESDIMLRPPR-NPKDDKLVNKRLISYSYLQIGMIQA 858 (1019)
T ss_pred HHHHHHHhC-CC--cccchhhhhhhHhhcccchhhhHhccCc--hhhHHhcCCC-CCcccccccchhHHHHHHHHHHHHH
Confidence 988887764 32 5688999999999999999999986433 2344545554 457788899888765 899999999
Q ss_pred HHHHHHhhhhccC
Q psy15803 753 MLMFWIPMLIYGQ 765 (1045)
Q Consensus 753 ~~~~~~~~~~~~~ 765 (1045)
+..||.++..+..
T Consensus 859 ~agF~tYFvima~ 871 (1019)
T KOG0203|consen 859 LAGFFTYFVIMAE 871 (1019)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998863
|
|
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-65 Score=589.03 Aligned_cols=580 Identities=20% Similarity=0.237 Sum_probs=415.6
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHh
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH 131 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~ 131 (1045)
++.-||+|.|.-+.-+.+ ..|+.+.-+|+++|..+..++|.. .+++.+++.++++.+.|.+...+|.++..
T Consensus 169 r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~-----d~Y~~YA~cI~iisv~Si~~sv~e~r~qs 239 (1140)
T KOG0208|consen 169 RRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA-----DSYYYYAFCIVIISVYSIVLSVYETRKQS 239 (1140)
T ss_pred HHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc-----ccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 346799999999988865 556777778889999998888887 78899999999999999999999999999
Q ss_pred hhhhhhccc--EEEEEECCeEEEEeecccccCeEEEecC-CCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCC
Q psy15803 132 LADGEINHR--SVDVIRNGMIYVEQWKDLKVGDIVKVYN-NSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208 (1045)
Q Consensus 132 ~~~~~~n~~--~~~V~r~g~~~~i~~~~l~vGDIV~l~~-ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~ 208 (1045)
+..+++-.. .|+|+|+|.|++|.++||+||||+.+.+ +-..|||++|++|+ |.||||+|||||.|+.|.+.+
T Consensus 240 ~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-----civNEsmLTGESVPv~K~~l~ 314 (1140)
T KOG0208|consen 240 IRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-----CIVNESMLTGESVPVTKTPLP 314 (1140)
T ss_pred HHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-----EEeecccccCCcccccccCCc
Confidence 999888654 5899999999999999999999999998 99999999999955 999999999999999999986
Q ss_pred CCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc
Q psy15803 209 ETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT 288 (1045)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~ 288 (1045)
.-... +.....+...+..+..|.||.+++-.. .-++.+.++|++||..|..|++.+
T Consensus 315 ~~~~~--------~~~~~~~~~~~~rh~lfcGT~vlq~r~----------------~~g~~v~a~V~RTGF~T~KGqLVR 370 (1140)
T KOG0208|consen 315 MGTDS--------LDSITISMSTNSRHTLFCGTKVLQARA----------------YLGGPVLAMVLRTGFSTTKGQLVR 370 (1140)
T ss_pred ccccc--------CcCeeechhhcCcceeeccceEEEeec----------------CCCCceEEEEEeccccccccHHHH
Confidence 22111 111123333444555577777775320 012238899999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhhhhHH
Q psy15803 289 SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTLE 368 (1045)
Q Consensus 289 ~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~ 368 (1045)
.....++.-.+.... +..++..+.+++++.++...+..... +.++...+.+++.++.+.+|++||.+++
T Consensus 371 silyPkP~~fkfyrd-s~~fi~~l~~ia~~gfiy~~i~l~~~----------g~~~~~iiirsLDliTi~VPPALPAalt 439 (1140)
T KOG0208|consen 371 SILYPKPVNFKFYRD-SFKFILFLVIIALIGFIYTAIVLNLL----------GVPLKTIIIRSLDLITIVVPPALPAALT 439 (1140)
T ss_pred hhcCCCCcccHHHHH-HHHHHHHHHHHHHHHHHHHhHhHHHc----------CCCHHHHhhhhhcEEEEecCCCchhhhh
Confidence 665555422222222 22223333334444444433322211 2456678999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCchhHhhh
Q psy15803 369 IVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQS 448 (1045)
Q Consensus 369 ~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1045)
++...+..|+ ++++|.|-++..+...|+++.+|||||||||++.+.+-.+..-...-.....-....+..
T Consensus 440 vG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~ 509 (1140)
T KOG0208|consen 440 VGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDS 509 (1140)
T ss_pred HHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhh
Confidence 9999999999 889999999999999999999999999999999999998876332110000000000110
Q ss_pred -----hhhcCCCCchHHHHHHHHHHhhceeeeecCCceeecccCCCCcccceEEEEecCCCCchhHHHHHHHHHHHHHhh
Q psy15803 449 -----RMIARNPSIEPVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQSRMIARNPSIEPVVREFLTMLAVCHTVYI 523 (1045)
Q Consensus 449 -----~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~~~l~~~f~~~~~~~~~svi~~~~~~~~~~~~~~~ti~~~~~~~~ 523 (1045)
.+..+. . ......+..+++.||++...++++
T Consensus 510 ~~~~~~l~~~~-~-~~~~~~~~~a~atCHSL~~v~g~l------------------------------------------ 545 (1140)
T KOG0208|consen 510 LQLFYKLSLRS-S-SLPMGNLVAAMATCHSLTLVDGTL------------------------------------------ 545 (1140)
T ss_pred ccceeeccccc-c-CCchHHHHHHHhhhceeEEeCCee------------------------------------------
Confidence 010111 0 112456788999999887654322
Q ss_pred hhhhHHHHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecC
Q psy15803 524 ELKHRTALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGD 603 (1045)
Q Consensus 524 ~~~~~~~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGD 603 (1045)
.|+.|+.-+ .+.. | -+.
T Consensus 546 -----------------------~GDPLdlkm----------------------------------fe~t-~-w~~---- 562 (1140)
T KOG0208|consen 546 -----------------------VGDPLDLKM----------------------------------FEST-G-WVY---- 562 (1140)
T ss_pred -----------------------ccCceeeee----------------------------------eecc-c-eEE----
Confidence 222221100 0000 0 000
Q ss_pred CccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhC
Q psy15803 604 GANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSG 683 (1045)
Q Consensus 604 G~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~ 683 (1045)
T Consensus 563 -------------------------------------------------------------------------------- 562 (1140)
T KOG0208|consen 563 -------------------------------------------------------------------------------- 562 (1140)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy15803 684 WSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIY 763 (1045)
Q Consensus 684 ~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~~ 763 (1045)
.|.|...+..-++
T Consensus 563 -----------------------------ee~~~~~~~~~~~-------------------------------------- 575 (1140)
T KOG0208|consen 563 -----------------------------EEADIEDEATREF-------------------------------------- 575 (1140)
T ss_pred -----------------------------Eeccccchhhhhh--------------------------------------
Confidence 0000000000000
Q ss_pred cCcccccCCccccceeeeEEEEEEeeeeeeeeecCCCcchhhhhhhhhccccccccccccccccccCCChhHHHHHHHHH
Q psy15803 764 GQGTIWANGKDGGYLVLGNIVYTVTEQSRMIARNPSIEPVVREFLTMLAVCHTVIPEMKDGVLQYHASSPDEKALILGAK 843 (1045)
Q Consensus 764 ~~~~~~~ng~~~d~~~~g~~v~tV~~k~~~~~~~~s~~~~~~~~l~~~slc~~a~~~~~~~~~~~~~g~p~e~all~~a~ 843 (1045)
++..|. .-+|++.+ ...+.
T Consensus 576 ---------------------------------------------------~~~~p~---------v~~p~~~~-~~~~t 594 (1140)
T KOG0208|consen 576 ---------------------------------------------------NTLIPT---------VVRPPENA-FNQST 594 (1140)
T ss_pred ---------------------------------------------------CCccCC---------EeCCCccc-ccCCC
Confidence 000000 00122211 00011
Q ss_pred HcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcC-CCcEEEEEeCCcHHHHHHhccCchhHHHHHHH
Q psy15803 844 AFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTP-QNEIKVFCKGADNMILSRLDSHSKYVDETKTH 922 (1045)
Q Consensus 844 ~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~-~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~ 922 (1045)
+.| .+.+.+++.+||+|..||||||+.++ +++..+|+|||||.|.+.|++. ..+.++++.
T Consensus 595 ~~~------------------~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~-tvP~dy~ev 655 (1140)
T KOG0208|consen 595 ECG------------------EGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE-TVPADYQEV 655 (1140)
T ss_pred cCC------------------CcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc-cCCccHHHH
Confidence 111 12678999999999999999999987 4568999999999999999864 668899999
Q ss_pred HHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHH
Q psy15803 923 LEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALI 1002 (1045)
Q Consensus 923 ~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~ 1002 (1045)
++.|+.+|+||||+|+|.++... |.+ ..+..|+.+|+||+|+|++.||+++|++++.+|++|+
T Consensus 656 l~~Yt~~GfRVIAlA~K~L~~~~---~~~--------------~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~ 718 (1140)
T KOG0208|consen 656 LKEYTHQGFRVIALASKELETST---LQK--------------AQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELN 718 (1140)
T ss_pred HHHHHhCCeEEEEEecCccCcch---HHH--------------HhhccHhhhhccceeeEEEEeecccccccHHHHHHHH
Confidence 99999999999999999998762 332 1234579999999999999999999999999999999
Q ss_pred HCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEeecCC
Q psy15803 1003 KAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLDLDGY 1041 (1045)
Q Consensus 1003 ~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~i~g~ 1041 (1045)
+|.||++|+||||..||++|||+|||+.+..+++..+-+
T Consensus 719 ~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~ 757 (1140)
T KOG0208|consen 719 RANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELE 757 (1140)
T ss_pred hhcceEEEEcCCchheeeehhhcccccCCCCeEEEEecc
Confidence 999999999999999999999999999998877655543
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-63 Score=585.97 Aligned_cols=526 Identities=16% Similarity=0.137 Sum_probs=371.2
Q ss_pred HHHHhHHHHHHHHHHHHhcccccccc-----C-CcchhhhHHHHHH----HHHHHHHHHHHHHhhhhhhhc---cc-EEE
Q psy15803 78 EQFRRYSNIFFLFIALLQQIPDVSPT-----G-RYTTLIPLILIMV----VSGIKEIIEDIKRHLADGEIN---HR-SVD 143 (1045)
Q Consensus 78 ~qf~~~~n~~fl~~~il~~i~~~~~~-----~-~~~~~~~l~~i~~----i~~i~~~~~~~~~~~~~~~~n---~~-~~~ 143 (1045)
.+|++|..+.++++++++++....+. + +..+.+.++++++ ++.+.|.+.+.|.+++.+.+. +. +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46788998999999888876432111 1 1122333344443 344445555777777665554 33 565
Q ss_pred -EEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCccccccc
Q psy15803 144 -VIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQL 222 (1045)
Q Consensus 144 -V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~ 222 (1045)
|.|||++++|++++|+|||+|.|++||.|||||+|++|+ +.||||+|||||.|+.|.++.+..
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~d~~----------- 171 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-----ATVDESAITGESAPVIKESGGDFD----------- 171 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-----eEEecchhcCCCCceeccCCCccC-----------
Confidence 679999999999999999999999999999999999965 789999999999999999872100
Q ss_pred ceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHH
Q psy15803 223 KGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDK 299 (1045)
Q Consensus 223 ~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~ 299 (1045)
..|+||.+.+|. +.+.|+.+|.+|.++++.+ .++.+++++|.
T Consensus 172 -------------~V~aGT~v~~G~----------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 172 -------------NVIGGTSVASDW----------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred -------------eeecCceeecce----------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 029999999998 7899999999999988865 66777899997
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhh
Q psy15803 300 ITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFIN 379 (1045)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~ 379 (1045)
....+...+.++. ++++ ++.++... | .++...+...+++++.+|||+|+..++++...++.++
T Consensus 217 ~l~~l~~~l~ii~--l~~~---~~~~~~~~------~-----~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~- 279 (673)
T PRK14010 217 ALFTLLMTLTIIF--LVVI---LTMYPLAK------F-----LNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRV- 279 (673)
T ss_pred HHHHHHHHHhHHH--HHHH---HHHHHHHh------h-----ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-
Confidence 7665543332211 1111 11111000 0 0222356667778888899999999999999999988
Q ss_pred cccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchH
Q psy15803 380 NDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEP 459 (1045)
Q Consensus 380 ~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (1045)
+++++++|++..+|.||++++||||||||||+|++.+.++...+. ....++.......+... .+|
T Consensus 280 ---------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~-----~~~~~ll~~a~~~~~~s-~~P 344 (673)
T PRK14010 280 ---------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS-----SSFERLVKAAYESSIAD-DTP 344 (673)
T ss_pred ---------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-----ccHHHHHHHHHHhcCCC-CCh
Confidence 899999999999999999999999999999998777666542111 11112222211111111 133
Q ss_pred HHHHHHHHHhhceeeeecCCceeecccCCCCcccceEE------------------------------------------
Q psy15803 460 VVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQSRM------------------------------------------ 497 (1045)
Q Consensus 460 ~~~~~~~~l~~c~~v~~~~~~~l~~~f~~~~~~~~~sv------------------------------------------ 497 (1045)
..+.+.......+...... ..-..||++++ ++|++
T Consensus 345 ~~~AIv~~a~~~~~~~~~~-~~~~~pF~~~~--k~~gv~~~g~~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~ 421 (673)
T PRK14010 345 EGRSIVKLAYKQHIDLPQE-VGEYIPFTAET--RMSGVKFTTREVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGG 421 (673)
T ss_pred HHHHHHHHHHHcCCCchhh-hcceecccccc--ceeEEEECCEEEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCC
Confidence 3333332221110000000 00012333332 22222
Q ss_pred -----------EEecCCCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCceEEEechhhHHHhhHH
Q psy15803 498 -----------IARNPSIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNNYALIIDGLALDYALKHE 558 (1045)
Q Consensus 498 -----------i~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~~~vi~G~~l~~~~~~~ 558 (1045)
++.....|++|++.+++++.|++.|+++.|.| ++|+++|+..
T Consensus 422 ~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------------------- 482 (673)
T PRK14010 422 TPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------------------- 482 (673)
T ss_pred eEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------
Confidence 22223355777788888888888887755554 4466666653
Q ss_pred HHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccc
Q psy15803 559 LRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIG 637 (1045)
Q Consensus 559 ~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~ 637 (1045)
++||++|+||.++|+.+|++ |++|+|+|||+||+|||++|||||++ +|+|++++|+|++++++
T Consensus 483 ---------------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd 546 (673)
T PRK14010 483 ---------------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDS 546 (673)
T ss_pred ---------------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCC
Confidence 99999999999999999999 99999999999999999999999966 79999999999999999
Q ss_pred hhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhH----------HHHHHHH--Hhhhh
Q psy15803 638 QFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERW----------TIGLYNV--LFTAF 705 (1045)
Q Consensus 638 ~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~----------~l~~~n~--~~t~~ 705 (1045)
+|..|.+++ ..||..|.|+++++.|.+..|+...++.+...|...+++...++-+ .-..||- +.-.+
T Consensus 547 ~ls~Iv~av-~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (673)
T PRK14010 547 NPTKLMEVV-LIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALIFNALIIVLLI 625 (673)
T ss_pred CHHHHHHHH-HHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccchhhccccCCChHHHHHHHHHHHHHHHHHHH
Confidence 999999999 8999999999999999999999998888776666666544443322 2256773 44566
Q ss_pred hhhhhhcccccCChhhhhcC
Q psy15803 706 PPLAIGILDQVCSARTRLKY 725 (1045)
Q Consensus 706 p~~~~~~~~~d~~~~~~~~~ 725 (1045)
|.-.-|+--++.+...++++
T Consensus 626 ~~~~~~~~~~~~~~~~~~~~ 645 (673)
T PRK14010 626 PIAMKGVKFKGASTQTILMK 645 (673)
T ss_pred HHHhcCcccccCCHHHHHhh
Confidence 77777888888888877654
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-61 Score=574.53 Aligned_cols=532 Identities=15% Similarity=0.136 Sum_probs=381.0
Q ss_pred HHHHHhHHHHHHHHHHHHhcccccccc------C---CcchhhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc---c-EEE
Q psy15803 77 FEQFRRYSNIFFLFIALLQQIPDVSPT------G---RYTTLIPLILIMVVSGIKEIIEDIKRHLADGEINH---R-SVD 143 (1045)
Q Consensus 77 ~~qf~~~~n~~fl~~~il~~i~~~~~~------~---~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~~n~---~-~~~ 143 (1045)
..||++|..+.+++.++++++..+.+. . .+...+.+++.++++.+.+.++++|.+++.+.+.+ . +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 468899999999999999987543211 1 12223455566667777888999888877766543 3 599
Q ss_pred EEECCe-EEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCccccccc
Q psy15803 144 VIRNGM-IYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQL 222 (1045)
Q Consensus 144 V~r~g~-~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~ 222 (1045)
|+|+|+ +++|++++|++||+|.|++||.|||||+|++|. +.||||+|||||.|+.|.+++..
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-----a~VDESaLTGES~PV~K~~G~~~------------ 170 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-----ASVDESAITGESAPVIRESGGDF------------ 170 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-----EEEEcccccCCCCceEeCCCCcc------------
Confidence 999988 899999999999999999999999999999964 89999999999999999987541
Q ss_pred ceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHH
Q psy15803 223 KGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDK 299 (1045)
Q Consensus 223 ~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~ 299 (1045)
...|+||.+.+|. +.+.|+.+|.+|.++++.. .++.+++++++
T Consensus 171 ------------~~V~aGT~v~~G~----------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~ 216 (679)
T PRK01122 171 ------------SSVTGGTRVLSDW----------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEI 216 (679)
T ss_pred ------------CeEEeceEEEeee----------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHH
Confidence 0129999999998 7899999999999988765 66777899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhh
Q psy15803 300 ITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFIN 379 (1045)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~ 379 (1045)
..+.+...++.+.++++++.+.+. +| .. ....+...+++++++|||+|+..++.+...++.++
T Consensus 217 al~~l~~~l~~i~l~~~~~~~~~~-~~----------~g-----~~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~- 279 (679)
T PRK01122 217 ALTILLAGLTIIFLLVVATLPPFA-AY----------SG-----GALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRV- 279 (679)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-HH----------hC-----chHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHH-
Confidence 888877666554444333322221 11 10 01267788999999999999999999988899988
Q ss_pred cccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchH
Q psy15803 380 NDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEP 459 (1045)
Q Consensus 380 ~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (1045)
+++++++|++..+|.||++|+||||||||||+|+|.+.+++..+. .....+.......+.... ++
T Consensus 280 ---------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~~~~~ll~~a~~~s~~s~-hP 344 (679)
T PRK01122 280 ---------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-----VTEEELADAAQLSSLADE-TP 344 (679)
T ss_pred ---------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC-----CCHHHHHHHHHHhcCCCC-Cc
Confidence 889999999999999999999999999999999999999864321 111222222111111111 22
Q ss_pred HHHHHHHHHhhceeeeecC---CceeecccCCCCcccceEE---------------------------------------
Q psy15803 460 VVREFLTMLAVCHTVCSVA---GNILVPNFNSNNVKEQSRM--------------------------------------- 497 (1045)
Q Consensus 460 ~~~~~~~~l~~c~~v~~~~---~~~l~~~f~~~~~~~~~sv--------------------------------------- 497 (1045)
..+.+.......+...... ...-..||++.+ +.+++
T Consensus 345 ~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~--~~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~ 422 (679)
T PRK01122 345 EGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQT--RMSGVDLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVAR 422 (679)
T ss_pred hHHHHHHHHHhhcCCCchhhccccceeEeecCcC--ceEEEEECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHh
Confidence 2222222111100000000 000122444333 22222
Q ss_pred --------------EEecCCCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCceEEEechhhHHHh
Q psy15803 498 --------------IARNPSIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNNYALIIDGLALDYAL 555 (1045)
Q Consensus 498 --------------i~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~~~vi~G~~l~~~~ 555 (1045)
++.....|++|++.+++++.|+++|+++.|.| ++|+++|+++
T Consensus 423 ~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------- 486 (679)
T PRK01122 423 KGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------- 486 (679)
T ss_pred CCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------
Confidence 22223345777777777888888777755544 4466666653
Q ss_pred hHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhcccc
Q psy15803 556 KHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDY 634 (1045)
Q Consensus 556 ~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~ 634 (1045)
++||++|+||.++|+.+|++ |++|+|+|||+||+|||++|||||++ +|+|++++|+|+++
T Consensus 487 ------------------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVL 547 (679)
T PRK01122 487 ------------------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVD 547 (679)
T ss_pred ------------------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEE
Confidence 89999999999999999999 99999999999999999999999966 79999999999999
Q ss_pred ccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhH----------HHHHHHH--Hh
Q psy15803 635 SIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERW----------TIGLYNV--LF 702 (1045)
Q Consensus 635 ~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~----------~l~~~n~--~~ 702 (1045)
++++|..|.+++ ..||...-.-..+..|++...+.-.+..+-..|...+++...++-+ .-+.||- +.
T Consensus 548 ldd~~s~Iv~av-~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 626 (679)
T PRK01122 548 LDSNPTKLIEVV-EIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQLNALNIMHLHSPQSAILSALIFNALIIV 626 (679)
T ss_pred eCCCHHHHHHHH-HHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCccccccccccCCChHHHHHHHHHHHHHHHH
Confidence 999999999999 8999999777778888888666544443333333333333332222 2356773 44
Q ss_pred hhhhhhhhhcccccCChhhhhcC-Cccc
Q psy15803 703 TAFPPLAIGILDQVCSARTRLKY-PILY 729 (1045)
Q Consensus 703 t~~p~~~~~~~~~d~~~~~~~~~-p~ly 729 (1045)
..+|.-.-|+--++.+...++++ =-.|
T Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (679)
T PRK01122 627 ALIPLALKGVKYRPLSAAALLRRNLLIY 654 (679)
T ss_pred HhHHHHhcCccccccCHHHHHhhceeEe
Confidence 56677778888888888877654 3344
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-61 Score=569.91 Aligned_cols=452 Identities=17% Similarity=0.220 Sum_probs=363.4
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhhhhhhh---cccEEEEEE-CCeEEEEeecccccCeEEEecCCCccceeEEEEee
Q psy15803 106 YTTLIPLILIMVVSGIKEIIEDIKRHLADGEI---NHRSVDVIR-NGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLST 181 (1045)
Q Consensus 106 ~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~~---n~~~~~V~r-~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~ 181 (1045)
|.++..+++++.++...|.+...|..++.+.+ .++.+++++ ||+.++|+.++|++||+|.|++||+||+||++++|
T Consensus 174 f~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G 253 (713)
T COG2217 174 FEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSG 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeC
Confidence 35666777777777777777777777776655 567787776 45589999999999999999999999999999996
Q ss_pred cCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeecc
Q psy15803 182 SENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRG 261 (1045)
Q Consensus 182 s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G 261 (1045)
+ ..||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 254 ~-----s~vDeS~iTGEs~PV~k~~Gd~V---------------------------~aGtiN~~G~-------------- 287 (713)
T COG2217 254 S-----SSVDESMLTGESLPVEKKPGDEV---------------------------FAGTVNLDGS-------------- 287 (713)
T ss_pred c-----EEeecchhhCCCCCEecCCCCEE---------------------------eeeEEECCcc--------------
Confidence 5 78999999999999999999988 9999999998
Q ss_pred ceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcccc
Q psy15803 262 SMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLL 338 (1045)
Q Consensus 262 ~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 338 (1045)
+...|+++|.||.+.++.+ .++.+++++|+..+++..++++..++++++++++|.++..
T Consensus 288 --------l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~---------- 349 (713)
T COG2217 288 --------LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG---------- 349 (713)
T ss_pred --------EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC----------
Confidence 7899999999998888776 8899999999999999999999999999998886654321
Q ss_pred CCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCcc
Q psy15803 339 SRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTL 418 (1045)
Q Consensus 339 ~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTL 418 (1045)
.+|...+.++++++++.|||+|.+++|++...+..+. +++|+++|+...+|.++++|+++|||||||
T Consensus 350 ---~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvvFDKTGTL 416 (713)
T COG2217 350 ---GDWETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVVFDKTGTL 416 (713)
T ss_pred ---CcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEEEeCCCCC
Confidence 2455689999999999999999999999999999977 899999999999999999999999999999
Q ss_pred ccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhc--ee---eeecCCc----------ee-
Q psy15803 419 TRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVC--HT---VCSVAGN----------IL- 482 (1045)
Q Consensus 419 T~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c--~~---v~~~~~~----------~l- 482 (1045)
|+|+++++++...+. ++.+++......+.++. ||..+........- .. .....+. ++
T Consensus 417 T~G~p~v~~v~~~~~------~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~~~~~~~~~~i~G~Gv~~~v~g~~v~v 489 (713)
T COG2217 417 TEGKPEVTDVVALDG------DEDELLALAAALEQHSE-HPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAEVDGERVLV 489 (713)
T ss_pred cCCceEEEEEecCCC------CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcCCCCccceeeeccCcEEEEECCEEEEE
Confidence 999999999886432 22333322212222222 45555544422211 00 1111111 10
Q ss_pred -----ec--c--cC--CCCc----ccceE---------EEEecCCCCchhHHHHHHHHHHHHHhhhhhhHH--------H
Q psy15803 483 -----VP--N--FN--SNNV----KEQSR---------MIARNPSIEPVVREFLTMLAVCHTVYIELKHRT--------A 530 (1045)
Q Consensus 483 -----~~--~--f~--~~~~----~~~~s---------vi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~ 530 (1045)
.. . .+ ..+. ....+ +++.....|++|++++++|+.+++.|+++.|.| +
T Consensus 490 G~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~ 569 (713)
T COG2217 490 GNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEA 569 (713)
T ss_pred cCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 00 0 00 1110 01111 222223468999999999999999999966655 5
Q ss_pred HHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHH
Q psy15803 531 LASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAM 610 (1045)
Q Consensus 531 ~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~a 610 (1045)
+++.+|+++ +++.+.|+||+++|+.+|++ |++|+|||||+||+||
T Consensus 570 iA~~lGId~----------------------------------v~AellPedK~~~V~~l~~~-g~~VamVGDGINDAPA 614 (713)
T COG2217 570 IAKELGIDE----------------------------------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPA 614 (713)
T ss_pred HHHHcChHh----------------------------------heccCCcHHHHHHHHHHHhc-CCEEEEEeCCchhHHH
Confidence 688888866 99999999999999999988 8999999999999999
Q ss_pred HHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHH
Q psy15803 611 IQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELW 677 (1045)
Q Consensus 611 l~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~ 677 (1045)
|++|||||++ +|+|.+.+++|++++.++++.+.+++ ..+|.+++++++++.|.|.+|.+++...++
T Consensus 615 LA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai-~lsr~t~~~IkqNl~~A~~yn~~~iplA~~ 681 (713)
T COG2217 615 LAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAI-DLSRATRRIIKQNLFWAFGYNAIAIPLAAG 681 (713)
T ss_pred HhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 58999999999999999999999999 899999999999999999999988555443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-58 Score=543.06 Aligned_cols=527 Identities=15% Similarity=0.151 Sum_probs=376.3
Q ss_pred HHHHHhHHHHHHHHHHHHhccccccc-------c--CCcch--hhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc---c-E
Q psy15803 77 FEQFRRYSNIFFLFIALLQQIPDVSP-------T--GRYTT--LIPLILIMVVSGIKEIIEDIKRHLADGEINH---R-S 141 (1045)
Q Consensus 77 ~~qf~~~~n~~fl~~~il~~i~~~~~-------~--~~~~~--~~~l~~i~~i~~i~~~~~~~~~~~~~~~~n~---~-~ 141 (1045)
..||+++..+.+++.++++++..+.+ . +|+.. .+.+++.++++.+.+.++++|.+++.+.+++ . .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 45889999999999999887753321 1 13322 2334555677788888999999888877653 3 4
Q ss_pred EEEEE-CCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCccccc
Q psy15803 142 VDVIR-NGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLA 220 (1045)
Q Consensus 142 ~~V~r-~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~ 220 (1045)
++|+| ||++++|++++|+|||+|.|++||.|||||++++|+ +.||||+|||||.|+.|.+++...
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-----~~VDESaLTGES~PV~K~~g~~~~--------- 172 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-----ASVDESAITGESAPVIKESGGDFA--------- 172 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-----EEEEcccccCCCCceeecCCCCcc---------
Confidence 78885 899999999999999999999999999999999964 899999999999999999875320
Q ss_pred ccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChH
Q psy15803 221 QLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTV 297 (1045)
Q Consensus 221 ~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~ 297 (1045)
..|+||.+.+|. +.+.|+.+|.+|.++++.. .++.+++++
T Consensus 173 ---------------~V~aGT~v~~G~----------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktpl 215 (675)
T TIGR01497 173 ---------------SVTGGTRILSDW----------------------LVVECTANPGETFLDRMIALVEGAQRRKTPN 215 (675)
T ss_pred ---------------eeecCcEEEeeE----------------------EEEEEEEecccCHHHHHHHHHHhcccCCChH
Confidence 029999999988 7899999999998888775 667778999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHH
Q psy15803 298 DKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATF 377 (1045)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~ 377 (1045)
|..++.+..++.++.++++++ ++.+.... .....+...+++++++|||+|+...+.+...++.+
T Consensus 216 q~~l~~l~~~l~~v~li~~~~---~~~~~~~~-------------~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r 279 (675)
T TIGR01497 216 EIALTILLIALTLVFLLVTAT---LWPFAAYG-------------GNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDR 279 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHhc-------------ChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHH
Confidence 988887765544333322221 12111000 01124666788999999998877777776778887
Q ss_pred hhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCc
Q psy15803 378 INNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSI 457 (1045)
Q Consensus 378 i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (1045)
+ +++|+++|+...+|.||++|+||||||||||+|+|++.+++..+. .....+.+.....+....
T Consensus 280 ~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~~~~~ll~~aa~~~~~s~- 343 (675)
T TIGR01497 280 V----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----VDEKTLADAAQLASLADD- 343 (675)
T ss_pred H----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----CcHHHHHHHHHHhcCCCC-
Confidence 7 889999999999999999999999999999999999999874221 111222222111111111
Q ss_pred hHHHHHHHHHHhhceeeeec---CCceeecccCCCCcccceE--------------------------------------
Q psy15803 458 EPVVREFLTMLAVCHTVCSV---AGNILVPNFNSNNVKEQSR-------------------------------------- 496 (1045)
Q Consensus 458 ~~~~~~~~~~l~~c~~v~~~---~~~~l~~~f~~~~~~~~~s-------------------------------------- 496 (1045)
++..+.+....... ..... ....-..||++.+ +.+.
T Consensus 344 hP~a~Aiv~~a~~~-~~~~~~~~~~~~~~~pf~~~~--~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~ 420 (675)
T TIGR01497 344 TPEGKSIVILAKQL-GIREDDVQSLHATFVEFTAQT--RMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQ 420 (675)
T ss_pred CcHHHHHHHHHHHc-CCCccccccccceEEEEcCCC--cEEEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 22222222211110 00000 0000112333332 1111
Q ss_pred ----------------EEEecCCCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCceEEEechhhH
Q psy15803 497 ----------------MIARNPSIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNNYALIIDGLALD 552 (1045)
Q Consensus 497 ----------------vi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~~~vi~G~~l~ 552 (1045)
+++.....|++|++.+++++.+++.|+++.|.| ++++.+|+++
T Consensus 421 ~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------------- 487 (675)
T TIGR01497 421 VARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------------- 487 (675)
T ss_pred HHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------
Confidence 112222345677777777777777776644443 3355555543
Q ss_pred HHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhc
Q psy15803 553 YALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACA 631 (1045)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~ 631 (1045)
+++|++|+||.++|+.+|++ |+.|+|+|||+||+|||++|||||++ +|++.+++++|
T Consensus 488 ---------------------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaad 545 (675)
T TIGR01497 488 ---------------------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAAN 545 (675)
T ss_pred ---------------------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCC
Confidence 89999999999999999998 89999999999999999999999977 68999999999
Q ss_pred cccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhH----------HHHHHHH-
Q psy15803 632 SDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERW----------TIGLYNV- 700 (1045)
Q Consensus 632 ~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~----------~l~~~n~- 700 (1045)
+++++++|..|.+++ .+||..+-....++.|++..++.-.+..+-..|...+++...++-+ .-+.||-
T Consensus 546 ivLldd~~s~Iv~av-~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (675)
T TIGR01497 546 MVDLDSDPTKLIEVV-HIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQALNIMCLHSPDSAILSALIFNAL 624 (675)
T ss_pred EEECCCCHHHHHHHH-HHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchhhhccccCCChHHHHHHHHHHHHH
Confidence 999999999999999 8999999999999999999999877766665555555543333322 2356773
Q ss_pred -HhhhhhhhhhhcccccCChhhhhcC
Q psy15803 701 -LFTAFPPLAIGILDQVCSARTRLKY 725 (1045)
Q Consensus 701 -~~t~~p~~~~~~~~~d~~~~~~~~~ 725 (1045)
+...+|.-.-|+--++.+...++++
T Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (675)
T TIGR01497 625 IIPALIPLALKGVSYRPLTASALLRR 650 (675)
T ss_pred HHHHhHHHHhcCcccccCCHHHHHhh
Confidence 4456677777888888888777654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-58 Score=518.54 Aligned_cols=543 Identities=20% Similarity=0.244 Sum_probs=385.3
Q ss_pred CCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy15803 54 CKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLA 133 (1045)
Q Consensus 54 ~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~~~ 133 (1045)
++||+|+..-.-.++ -..|.|.-..|+.+|+.+...+|+.- ..||++.+.|++++.+-+.. .+|..+....
T Consensus 174 ~~~G~N~fdi~vPtF----~eLFkE~A~aPfFVFQVFcvgLWCLD----eyWYySlFtLfMli~fE~tl-V~Qrm~~lse 244 (1160)
T KOG0209|consen 174 HKYGKNKFDIVVPTF----SELFKEHAVAPFFVFQVFCVGLWCLD----EYWYYSLFTLFMLIAFEATL-VKQRMRTLSE 244 (1160)
T ss_pred HHhcCCccccCCccH----HHHHHHhccCceeeHhHHhHHHHHhH----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 469999887666664 24456666788889999999999883 35666677777777775544 5566666666
Q ss_pred hhhhccc--EEEEEECCeEEEEeecccccCeEEEecC---CCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCC
Q psy15803 134 DGEINHR--SVDVIRNGMIYVEQWKDLKVGDIVKVYN---NSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208 (1045)
Q Consensus 134 ~~~~n~~--~~~V~r~g~~~~i~~~~l~vGDIV~l~~---ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~ 208 (1045)
.+.+.++ .+.|+|+++|+.+.++||.|||+|.|.. ...||||.+||+|| |.|||++|||||.|..|.++.
T Consensus 245 ~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-----ciVnEaMLtGESvPl~KE~Ie 319 (1160)
T KOG0209|consen 245 FRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-----CIVNEAMLTGESVPLMKESIE 319 (1160)
T ss_pred HHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-----eeechhhhcCCCccccccccc
Confidence 6666544 4789999999999999999999999976 66899999999977 999999999999999999876
Q ss_pred CCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeec-CcEEEEEEEEecCcchhhhhc
Q psy15803 209 ETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRN-TAWIIGIVVYTGPDSKLMKNA 287 (1045)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~n-t~~~~~iV~~tG~~T~~~~~~ 287 (1045)
... .++ .++.+..+++...|.||.+++-... .-+.++. .+-+++.|++||.+|..|++.
T Consensus 320 ~~~----~d~------~ld~~~d~k~hVlfGGTkivQht~p----------~~~slk~pDggc~a~VlrTGFeTSQGkLv 379 (1160)
T KOG0209|consen 320 LRD----SDD------ILDIDRDDKLHVLFGGTKIVQHTPP----------KKASLKTPDGGCVAYVLRTGFETSQGKLV 379 (1160)
T ss_pred cCC----hhh------hcccccccceEEEEcCceEEEecCC----------ccccccCCCCCeEEEEEeccccccCCcee
Confidence 542 111 1223344455566999998865311 0011221 122789999999999999988
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhhhhH
Q psy15803 288 TSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTL 367 (1045)
Q Consensus 288 ~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~ 367 (1045)
+..-..-.+.. .-|+-..++++++++++++++ +..|...... ...+-...|+-+..++.+++|.-||+-+
T Consensus 380 Rtilf~aervT-aNn~Etf~FILFLlVFAiaAa--~Yvwv~Gskd-------~~RsrYKL~LeC~LIlTSVvPpELPmEL 449 (1160)
T KOG0209|consen 380 RTILFSAERVT-ANNRETFIFILFLLVFAIAAA--GYVWVEGSKD-------PTRSRYKLFLECTLILTSVVPPELPMEL 449 (1160)
T ss_pred eeEEecceeee-eccHHHHHHHHHHHHHHHHhh--heEEEecccC-------cchhhhheeeeeeEEEeccCCCCCchhh
Confidence 84322111110 012222333333444444332 2223211100 0123345778899999999999999999
Q ss_pred HHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCchhHhh
Q psy15803 368 EIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQ 447 (1045)
Q Consensus 368 ~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1045)
+++...+...+ ++.++.|..+-.+.-.|+||++|||||||||+..|.|.++.-....-+ .+
T Consensus 450 SmAVNsSL~AL----------ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~------~~--- 510 (1160)
T KOG0209|consen 450 SMAVNSSLIAL----------AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEG------AL--- 510 (1160)
T ss_pred hHHHHHHHHHH----------HHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcc------cc---
Confidence 99998888888 889999999999999999999999999999999999988642110000 00
Q ss_pred hhhhcCCCCchHHHHHHHHHHhhceeeeecCCceeecccCCCCcccceEEEEecCCCCchhHHHHHHHHHHHHHhhhhhh
Q psy15803 448 SRMIARNPSIEPVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQSRMIARNPSIEPVVREFLTMLAVCHTVYIELKH 527 (1045)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~~~l~~~f~~~~~~~~~svi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~ 527 (1045)
...++...+-..+++.||+..
T Consensus 511 -------~~~s~~p~~t~~vlAscHsLv---------------------------------------------------- 531 (1160)
T KOG0209|consen 511 -------TPASKAPNETVLVLASCHSLV---------------------------------------------------- 531 (1160)
T ss_pred -------cchhhCCchHHHHHHHHHHHH----------------------------------------------------
Confidence 000111112223333333211
Q ss_pred HHHHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccC
Q psy15803 528 RTALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGAND 607 (1045)
Q Consensus 528 ~~~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND 607 (1045)
T Consensus 532 -------------------------------------------------------------------------------- 531 (1160)
T KOG0209|consen 532 -------------------------------------------------------------------------------- 531 (1160)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHhccccccccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcc
Q psy15803 608 VAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQ 687 (1045)
Q Consensus 608 ~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~ 687 (1045)
T Consensus 532 -------------------------------------------------------------------------------- 531 (1160)
T KOG0209|consen 532 -------------------------------------------------------------------------------- 531 (1160)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHHHHHHHHHHHHHHHHHhhhhccCcc
Q psy15803 688 VLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIYGQGT 767 (1045)
Q Consensus 688 ~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~~~~~~ 767 (1045)
T Consensus 532 -------------------------------------------------------------------------------- 531 (1160)
T KOG0209|consen 532 -------------------------------------------------------------------------------- 531 (1160)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCccccceeeeEEEEEEeeeeeeeeecCCCcchhhhhhhhhccccccccccccccccccCCChhHHHHHHHHHHcCe
Q psy15803 768 IWANGKDGGYLVLGNIVYTVTEQSRMIARNPSIEPVVREFLTMLAVCHTVIPEMKDGVLQYHASSPDEKALILGAKAFGY 847 (1045)
Q Consensus 768 ~~~ng~~~d~~~~g~~v~tV~~k~~~~~~~~s~~~~~~~~l~~~slc~~a~~~~~~~~~~~~~g~p~e~all~~a~~~g~ 847 (1045)
.. ++. ..|||.|.|.+++. ||
T Consensus 532 ---------------------------------------------------~l-e~~----lVGDPlEKA~l~~v---~W 552 (1160)
T KOG0209|consen 532 ---------------------------------------------------LL-EDK----LVGDPLEKATLEAV---GW 552 (1160)
T ss_pred ---------------------------------------------------Hh-cCc----ccCChHHHHHHHhc---Cc
Confidence 00 000 24789998888654 66
Q ss_pred EEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCC----CcEEEEEeCCcHHHHHHhccCchhHHHHHHHH
Q psy15803 848 VFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQ----NEIKVFCKGADNMILSRLDSHSKYVDETKTHL 923 (1045)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~----~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~ 923 (1045)
.++..+.. ....+.....+|.++++|+|..|||||++.... -++++.+|||||+|.+++. +.+.++++.+
T Consensus 553 ~~~k~~~v---~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iY 626 (1160)
T KOG0209|consen 553 NLEKKNSV---CPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIY 626 (1160)
T ss_pred ccccCccc---CCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHHHHH
Confidence 55433211 122333346788999999999999999998643 2689999999999999986 4467888889
Q ss_pred HHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHH
Q psy15803 924 EQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIK 1003 (1045)
Q Consensus 924 ~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~ 1003 (1045)
.+|+++|.||||++||.++.-.. .+.-+..|+.+|+||+|.|++.|..|+|+|++.+|+.+++
T Consensus 627 k~ytR~GsRVLALg~K~l~~~~~-----------------~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~ 689 (1160)
T KOG0209|consen 627 KRYTRQGSRVLALGYKPLGDMMV-----------------SQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNN 689 (1160)
T ss_pred HHHhhccceEEEEecccccccch-----------------hhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhc
Confidence 99999999999999999984211 1111234689999999999999999999999999999999
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEeecC
Q psy15803 1004 AKISVWVLTGDKKETAINIGYSSRLVGQDTPLLDLDG 1040 (1045)
Q Consensus 1004 agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~i~g 1040 (1045)
+++||+||||||+.||.++|+++||+.....++.+.+
T Consensus 690 SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~ 726 (1160)
T KOG0209|consen 690 SSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPE 726 (1160)
T ss_pred cCceEEEEeCCCccchheehheeeeeccCceeeccCc
Confidence 9999999999999999999999999988765555443
|
|
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-57 Score=518.59 Aligned_cols=469 Identities=17% Similarity=0.171 Sum_probs=367.3
Q ss_pred cCCcchhhhHHHHHHHHHHHHHHHHHHHhhhhhhh---cccEEEEEECCe-EEEEeecccccCeEEEecCCCccceeEEE
Q psy15803 103 TGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEI---NHRSVDVIRNGM-IYVEQWKDLKVGDIVKVYNNSFFPGDLMV 178 (1045)
Q Consensus 103 ~~~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~~---n~~~~~V~r~g~-~~~i~~~~l~vGDIV~l~~ge~vPaD~il 178 (1045)
..+|.+...|+.++.+..+.|-....|...+..++ .+.++.++.+|+ .++|+.+.|++||+|+|.+|++||+||++
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 33455555666666666666666665555555443 567799999996 89999999999999999999999999999
Q ss_pred EeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCcccee
Q psy15803 179 LSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERIL 258 (1045)
Q Consensus 179 l~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l 258 (1045)
++|+ ++||||.+|||+.|+.|++++.+ .+|+++.+|.
T Consensus 418 v~Gs-----s~VDEs~iTGEs~PV~Kk~gs~V---------------------------iaGsiN~nG~----------- 454 (951)
T KOG0207|consen 418 VDGS-----SEVDESLITGESMPVPKKKGSTV---------------------------IAGSINLNGT----------- 454 (951)
T ss_pred EeCc-----eeechhhccCCceecccCCCCee---------------------------eeeeecCCce-----------
Confidence 9976 89999999999999999999888 9999999998
Q ss_pred eccceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC--C
Q psy15803 259 LRGSMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNA--G 333 (1045)
Q Consensus 259 ~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~--~ 333 (1045)
.+.-++++|.||.++++.+ +++..+.++|+.+|+++.++.++++++++.++++|.+....... .
T Consensus 455 -----------l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~ 523 (951)
T KOG0207|consen 455 -----------LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPR 523 (951)
T ss_pred -----------EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcc
Confidence 7788999999998888776 88999999999999999999999999999999998876542211 1
Q ss_pred CccccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeec
Q psy15803 334 DWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSD 413 (1045)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~D 413 (1045)
.|. ..+...|..++.+++++|||+|.+++|.+.+.+...- +.+|+++|..+.+|.+.+|++++||
T Consensus 524 ~~~-----~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~tVvFD 588 (951)
T KOG0207|consen 524 SFF-----DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVKTVVFD 588 (951)
T ss_pred hhh-----HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCCEEEEc
Confidence 222 4667889999999999999999999999988877644 8899999999999999999999999
Q ss_pred CCCccccceEEEEEEEEcCccccCCCCCchhH---hhhhhhcCCCCchHHHHHHHHHHh--------hceeeeecCC---
Q psy15803 414 KTGTLTRNVMEFKICSVAGNILVPNFNSNNVQ---EQSRMIARNPSIEPVVREFLTMLA--------VCHTVCSVAG--- 479 (1045)
Q Consensus 414 KTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~--------~c~~v~~~~~--- 479 (1045)
||||||+|++.++++...++.. ...+++ ...+....||- ...+.++.+... .+.+..+..+
T Consensus 589 KTGTLT~G~~~V~~~~~~~~~~----~~~e~l~~v~a~Es~SeHPi-g~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~ 663 (951)
T KOG0207|consen 589 KTGTLTEGKPTVVDFKSLSNPI----SLKEALALVAAMESGSEHPI-GKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYV 663 (951)
T ss_pred CCCceecceEEEEEEEecCCcc----cHHHHHHHHHHHhcCCcCch-HHHHHHHHHhcccccCccccceeecccCCCccc
Confidence 9999999999999998765431 111111 11112223433 233333332222 0010000001
Q ss_pred -------cee-----------------eccc--CCCCcccceE---------EEEecCCCCchhHHHHHHHHHHHHHhhh
Q psy15803 480 -------NIL-----------------VPNF--NSNNVKEQSR---------MIARNPSIEPVVREFLTMLAVCHTVYIE 524 (1045)
Q Consensus 480 -------~~l-----------------~~~f--~~~~~~~~~s---------vi~~~~~~~~~~~~~~~ti~~~~~~~~~ 524 (1045)
+++ +..+ ++++ +.-+ +++.....|++|++++.++..+++.|++
T Consensus 664 ~~~~~~~~i~iGN~~~~~r~~~~~~~~i~~~~~~~e~--~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~ 741 (951)
T KOG0207|consen 664 TVTVDGNEVLIGNKEWMSRNGCSIPDDILDALTESER--KGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIK 741 (951)
T ss_pred ceEEeeeEEeechHHHHHhcCCCCchhHHHhhhhHhh--cCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCce
Confidence 110 0011 1112 2222 2333445789999999999999999999
Q ss_pred hhhHH--------HHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCC
Q psy15803 525 LKHRT--------ALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNS 596 (1045)
Q Consensus 525 ~~~~~--------~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~ 596 (1045)
+.|.| .+|+++|++. |+|.+.|+||+++|+.+|++ ++
T Consensus 742 v~mLTGDn~~aA~svA~~VGi~~----------------------------------V~aev~P~~K~~~Ik~lq~~-~~ 786 (951)
T KOG0207|consen 742 VVMLTGDNDAAARSVAQQVGIDN----------------------------------VYAEVLPEQKAEKIKEIQKN-GG 786 (951)
T ss_pred EEEEcCCCHHHHHHHHHhhCcce----------------------------------EEeccCchhhHHHHHHHHhc-CC
Confidence 76655 3466777554 99999999999999999999 89
Q ss_pred EEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHH
Q psy15803 597 VTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVME 675 (1045)
Q Consensus 597 ~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 675 (1045)
.|+|||||+||+|||.+|||||++ .|+|.|.+++|++++.++++.+..++ ..+|.+.+|++.+..|.+.+|++.+.+.
T Consensus 787 ~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai-~LSrkt~~rIk~N~~~A~~yn~~~IpIA 865 (951)
T KOG0207|consen 787 PVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAI-DLSRKTVKRIKLNFVWALIYNLVGIPIA 865 (951)
T ss_pred cEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHH-HHHHHHHhhHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999999999988 68999999999999999999999999 8899999999999999999999987666
Q ss_pred HHHHHHhC
Q psy15803 676 LWFAIYSG 683 (1045)
Q Consensus 676 ~~~~~~~~ 683 (1045)
....+..+
T Consensus 866 agvF~P~~ 873 (951)
T KOG0207|consen 866 AGVFAPFG 873 (951)
T ss_pred eecccCCc
Confidence 55444444
|
|
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-57 Score=497.04 Aligned_cols=600 Identities=17% Similarity=0.201 Sum_probs=400.0
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhcccccc--ccCCcchhhhHHHHHHHHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVS--PTGRYTTLIPLILIMVVSGIKEIIEDIK 129 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~--~~~~~~~~~~l~~i~~i~~i~~~~~~~~ 129 (1045)
+.++||.|++...|-+.+- -|+--|-+|..+..-.++++.....-. ....|..+.-+..++++++...++|+++
T Consensus 45 Rlk~fG~NkleEkken~~l----KFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~n 120 (942)
T KOG0205|consen 45 RLKIFGPNKLEEKKESKFL----KFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENN 120 (942)
T ss_pred HHHhhCchhhhhhhhhHHH----HHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccc
Confidence 4578999999999887632 223334466677777777776552211 1125788888999999999999999999
Q ss_pred Hhhhhhhhc---ccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecC
Q psy15803 130 RHLADGEIN---HRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQA 206 (1045)
Q Consensus 130 ~~~~~~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~ 206 (1045)
.-.+..++. ..+++|+|||+|.++++++||||||+.++.|+.||||++||.+.- +.||+|.|||||.|+.|.+
T Consensus 121 AGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~----LkiDQSAlTGESLpvtKh~ 196 (942)
T KOG0205|consen 121 AGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKHP 196 (942)
T ss_pred cchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCCc----cccchhhhcCCccccccCC
Confidence 988776664 457999999999999999999999999999999999999999763 8899999999999999999
Q ss_pred CCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhh
Q psy15803 207 PNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKN 286 (1045)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~ 286 (1045)
++.+ |+|+.+.+|. +.++|++||.+|..|+.
T Consensus 197 gd~v---------------------------fSgSTcKqGE----------------------~eaVViATg~~TF~GkA 227 (942)
T KOG0205|consen 197 GDEV---------------------------FSGSTCKQGE----------------------IEAVVIATGVHTFFGKA 227 (942)
T ss_pred CCce---------------------------ecccccccce----------------------EEEEEEEeccceeehhh
Confidence 9988 9999999998 78999999999999987
Q ss_pred cc--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhh
Q psy15803 287 AT--SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQ 364 (1045)
Q Consensus 287 ~~--~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~ 364 (1045)
+. .......++++.++-+..+++..+.+ .+++-+...++.... .+-...-..+++++.-+|+++|
T Consensus 228 A~LVdst~~~GHFqkVLt~IGn~ci~si~~-g~lie~~vmy~~q~R------------~~r~~i~nLlvllIGgiPiamP 294 (942)
T KOG0205|consen 228 AHLVDSTNQVGHFQKVLTGIGNFCICSIAL-GMLIEITVMYPIQHR------------LYRDGIDNLLVLLIGGIPIAMP 294 (942)
T ss_pred HHhhcCCCCcccHHHHHHhhhhHHHHHHHH-HHHHHHHhhhhhhhh------------hhhhhhhheheeeecccccccc
Confidence 76 44677789999999887765544433 222222222221111 1111222344555556999999
Q ss_pred hhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEE----EEEcCccccCCCC
Q psy15803 365 VTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKI----CSVAGNILVPNFN 440 (1045)
Q Consensus 365 v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~----~~~~~~~~~~~~~ 440 (1045)
..++...++++.++ ++++++.+...++|+|+.+|++|+|||||||.|++++.+ ++..|..
T Consensus 295 tVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~------ 358 (942)
T KOG0205|consen 295 TVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD------ 358 (942)
T ss_pred eeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC------
Confidence 99999999999999 889999999999999999999999999999999999977 3433321
Q ss_pred CchhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCCceeecccCCCCcccceEEEEecCCCC---------------
Q psy15803 441 SNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQSRMIARNPSIE--------------- 505 (1045)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~~~l~~~f~~~~~~~~~svi~~~~~~~--------------- 505 (1045)
...+.-.+...+........-..|+.+|+--........++-.+||++.. ||....+.+++|+
T Consensus 359 ~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~--Krta~ty~d~dG~~~r~sKGAPeqil~l 436 (942)
T KOG0205|consen 359 KDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVD--KRTALTYIDPDGNWHRVSKGAPEQILKL 436 (942)
T ss_pred hHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccc--cceEEEEECCCCCEEEecCCChHHHHHH
Confidence 11111111111111111233334444443210000000122356888888 8888888777765
Q ss_pred -------------------------------------------------------chhHHHHHHHHHHHHHhhhhhhHHH
Q psy15803 506 -------------------------------------------------------PVVREFLTMLAVCHTVYIELKHRTA 530 (1045)
Q Consensus 506 -------------------------------------------------------~~~~~~~~ti~~~~~~~~~~~~~~~ 530 (1045)
|+|.+.++|+......|..++|.+.
T Consensus 437 ~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmitg 516 (942)
T KOG0205|consen 437 CNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 516 (942)
T ss_pred hhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecc
Confidence 2333344444444444444444441
Q ss_pred ----H----HHHcCCCCCCce-EEEechhhH-HHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEE
Q psy15803 531 ----L----ASLLGTTNNNYA-LIIDGLALD-YALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLA 600 (1045)
Q Consensus 531 ----~----~~~lG~~~~~~~-~vi~G~~l~-~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~ 600 (1045)
+ .+.+|...+-+. -.+-|..-. .+...+..+.+. ++-=||.+.|++|.++|+.||++ |+.++|
T Consensus 517 dqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie------~adgfAgVfpehKy~iV~~Lq~r-~hi~gm 589 (942)
T KOG0205|consen 517 DQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIE------KADGFAGVFPEHKYEIVKILQER-KHIVGM 589 (942)
T ss_pred hHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhh------hccCccccCHHHHHHHHHHHhhc-Cceecc
Confidence 1 222221110000 000000000 000000111111 23379999999999999999999 999999
Q ss_pred ecCCccChHHHHhcccccccc-CchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHH
Q psy15803 601 IGDGANDVAMIQKAHVGVGIS-GVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFA 679 (1045)
Q Consensus 601 iGDG~ND~~al~~AdVGigi~-g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~ 679 (1045)
+|||+||+|+|++||+||++. .+|+++.++|+++..+.++.+..++ ..+|.+|+|++.+..|.+.-.+-..+-.++.+
T Consensus 590 tgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~av-ltSraIfqrmknytiyavsitiriv~gfml~a 668 (942)
T KOG0205|consen 590 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA 668 (942)
T ss_pred cCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHH-HHHHHHHHHHhhheeeeehhHHHHHHHHHHHH
Confidence 999999999999999999885 5799999999999999999999999 69999999999999999887776554333333
Q ss_pred HHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHH-HHHHHHHHHHHHHHH
Q psy15803 680 IYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWI-WIGNALFHSMLMFWI 758 (1045)
Q Consensus 680 ~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~-~~~~~~~~s~~~~~~ 758 (1045)
..+-|. |..+-+++.++++.-.-....+++-+ |+.....|+.+..|. -+..|.|.+++...+
T Consensus 669 lIw~~d----------------f~pfmvliiailnd~t~mtis~d~v~-psp~pdswkl~~ifatgvVlgtyma~~tvif 731 (942)
T KOG0205|consen 669 LIWEFD----------------FSPFMVLIIAILNDGTIMTISKDRVK-PSPTPDSWKLKEIFATGVVLGTYMAIMTVIF 731 (942)
T ss_pred HHHHhc----------------CCHHHHHHHHHhcCCceEEEEcccCC-CCCCCcccchhhhheeeeEehhHHHHHHHHH
Confidence 333332 11222222333332211122222211 234445566665553 345666776665544
Q ss_pred hhhhcc
Q psy15803 759 PMLIYG 764 (1045)
Q Consensus 759 ~~~~~~ 764 (1045)
.|..+.
T Consensus 732 ~w~~~~ 737 (942)
T KOG0205|consen 732 FWAAYT 737 (942)
T ss_pred hhhhcc
Confidence 444443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-54 Score=514.79 Aligned_cols=430 Identities=27% Similarity=0.364 Sum_probs=328.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEE
Q psy15803 110 IPLILIMVVSGIKEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCY 189 (1045)
Q Consensus 110 ~~l~~i~~i~~i~~~~~~~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~ 189 (1045)
+++++.++-...+...++..+...++.+++++++|+|+| +++|++++|+|||+|.+++||.|||||+|++|+ |.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-----~~ 78 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-----CF 78 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-----EE
Confidence 334444444444444444444444445778899999999 999999999999999999999999999999963 99
Q ss_pred EEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcE
Q psy15803 190 IETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAW 269 (1045)
Q Consensus 190 Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~ 269 (1045)
||||+|||||.|+.|++++.+ |+|+.+.+|.
T Consensus 79 vdes~LTGEs~pv~k~~g~~v---------------------------~~gs~~~~G~---------------------- 109 (499)
T TIGR01494 79 VDESNLTGESVPVLKTAGDAV---------------------------FAGTYVFNGT---------------------- 109 (499)
T ss_pred EEcccccCCCCCeeeccCCcc---------------------------ccCcEEeccE----------------------
Confidence 999999999999999997766 9999999998
Q ss_pred EEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhh
Q psy15803 270 IIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQT-IMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFH 345 (1045)
Q Consensus 270 ~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1045)
....|..+|.+|..+++.. .....++++++..+++. .+++++++++++++++.+.++.... .++.
T Consensus 110 ~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~-----------~~~~ 178 (499)
T TIGR01494 110 LIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP-----------NSIF 178 (499)
T ss_pred EEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-----------ccHH
Confidence 5689999999997776654 55555788899999998 7777777777777776654331100 0245
Q ss_pred hHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEE
Q psy15803 346 SNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEF 425 (1045)
Q Consensus 346 ~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~ 425 (1045)
..+.+++++++.+|||+|+++++++...+..++ +++|+++|+++.+|+||+++++|||||||||+|+|+|
T Consensus 179 ~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v 248 (499)
T TIGR01494 179 KIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSF 248 (499)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCCcEEEeeCCCccccCceEE
Confidence 689999999999999999999999999999988 7789999999999999999999999999999999999
Q ss_pred EEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCCceeecccCCCCcccceEEEEecCC--
Q psy15803 426 KICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAGNILVPNFNSNNVKEQSRMIARNPS-- 503 (1045)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~~~l~~~f~~~~~~~~~svi~~~~~-- 503 (1045)
+++.+.+..+ ..+ |+....+...... +. .-..||++.+ ++|+.++..+.
T Consensus 249 ~~~~~~~~~~---------------~s~----hp~~~ai~~~~~~-~~-------~~~~~f~~~~--~~~~~~~~~~~~~ 299 (499)
T TIGR01494 249 KKVSVLGGEY---------------LSG----HPDERALVKSAKW-KI-------LNVFEFSSVR--KRMSVIVRGPDGT 299 (499)
T ss_pred EEEEecCCCc---------------CCC----ChHHHHHHHHhhh-cC-------cceeccCCCC--ceEEEEEecCCcE
Confidence 9998754211 111 2222222221110 00 0123666666 66666665421
Q ss_pred ---------------------------------------------CCchhHHHHHHHHHHHHHhhhhhhHHHHHHHcCCC
Q psy15803 504 ---------------------------------------------IEPVVREFLTMLAVCHTVYIELKHRTALASLLGTT 538 (1045)
Q Consensus 504 ---------------------------------------------~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~lG~~ 538 (1045)
.|+++++..++++.++++ |+
T Consensus 300 ~~~G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~--------------gi- 364 (499)
T TIGR01494 300 YVKGAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKETLLGLLGLEDPLRDDAKETISELREA--------------GI- 364 (499)
T ss_pred EEeCCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHC--------------CC-
Confidence 222222333333333222 22
Q ss_pred CCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccc
Q psy15803 539 NNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGV 618 (1045)
Q Consensus 539 ~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGi 618 (1045)
...+++|+....... ++..+. ++||++|+||+++|+.+|+. |+.|+|+|||+||+|||++|||||
T Consensus 365 ---~~~~ltGD~~~~a~~---------ia~~lg--i~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al~~Advgi 429 (499)
T TIGR01494 365 ---RVIMLTGDNVLTAKA---------IAKELG--IFARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPALKKADVGI 429 (499)
T ss_pred ---eEEEEcCCCHHHHHH---------HHHHcC--ceeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHHHhCCCcc
Confidence 256778887654432 333333 48999999999999999988 899999999999999999999999
Q ss_pred cccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHH
Q psy15803 619 GISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFA 679 (1045)
Q Consensus 619 gi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~ 679 (1045)
++. +++++|++++.+++..+..++ .+||++++++++++.|.+++|++..+..+++.
T Consensus 430 a~~----a~~~adivl~~~~l~~i~~~~-~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~ 485 (499)
T TIGR01494 430 AMG----AKAAADIVLLDDNLSTIVDAL-KEGRKTFSTIKSNIFWAIAYNLILIPLAALLA 485 (499)
T ss_pred ccc----hHHhCCeEEecCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 885 788999999999999999999 99999999999999999999999877776533
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-54 Score=528.36 Aligned_cols=460 Identities=14% Similarity=0.146 Sum_probs=350.7
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHhhhhhhh---cccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEe
Q psy15803 104 GRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEI---NHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLS 180 (1045)
Q Consensus 104 ~~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~ 180 (1045)
+.|.++..+++++.++.+.+.+.+.|.++..+.+ .+.+++|+|||++++|++++|+|||+|+|++||+|||||+|++
T Consensus 204 ~~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 204 GATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 3456667777788888888888888877776554 5678999999999999999999999999999999999999999
Q ss_pred ecCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeec
Q psy15803 181 TSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLR 260 (1045)
Q Consensus 181 ~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~ 260 (1045)
++ +.||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 284 g~-----~~vdes~lTGEs~Pv~k~~Gd~V---------------------------~aGt~~~~G~------------- 318 (741)
T PRK11033 284 PF-----ASFDESALTGESIPVERATGEKV---------------------------PAGATSVDRL------------- 318 (741)
T ss_pred Cc-----EEeecccccCCCCCEecCCCCee---------------------------ccCCEEcCce-------------
Confidence 65 88999999999999999998876 9999999998
Q ss_pred cceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccc
Q psy15803 261 GSMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYL 337 (1045)
Q Consensus 261 G~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 337 (1045)
+.+.|+.+|.+|.++++.+ .++.+++++++.+++++.++.+++++++++++++|.++..
T Consensus 319 ---------~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~--------- 380 (741)
T PRK11033 319 ---------VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFA--------- 380 (741)
T ss_pred ---------EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------
Confidence 7899999999998888775 6777899999999999999999999999998887643311
Q ss_pred cCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCc
Q psy15803 338 LSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGT 417 (1045)
Q Consensus 338 ~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGT 417 (1045)
.+|...+.++++++++.|||+|.+++|++...+.... +++|+++|+.+.+|.|++|++||||||||
T Consensus 381 ----~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v~~v~fDKTGT 446 (741)
T PRK11033 381 ----APWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRVTTVAFDKTGT 446 (741)
T ss_pred ----CCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCCCEEEEeCCCC
Confidence 1344568889999999999999999999998888877 78999999999999999999999999999
Q ss_pred cccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeec----------------CCc-
Q psy15803 418 LTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSV----------------AGN- 480 (1045)
Q Consensus 418 LT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~----------------~~~- 480 (1045)
||+|+|++.++...+. ..+..+........... .||..+.+...........+. +++
T Consensus 447 LT~g~~~v~~~~~~~~-----~~~~~~l~~aa~~e~~s-~hPia~Ai~~~a~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~ 520 (741)
T PRK11033 447 LTEGKPQVTDIHPATG-----ISESELLALAAAVEQGS-THPLAQAIVREAQVRGLAIPEAESQRALAGSGIEGQVNGER 520 (741)
T ss_pred CcCCceEEEEEEecCC-----CCHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhcCCCCCCCcceEEEeeEEEEEEECCEE
Confidence 9999999999875332 11222222211111111 245555544432211100000 010
Q ss_pred ee------ecccCCC---C----cccceEE---------EEecCCCCchhHHHHHHHHHHHHHhhhhhhHHHHHHHcCCC
Q psy15803 481 IL------VPNFNSN---N----VKEQSRM---------IARNPSIEPVVREFLTMLAVCHTVYIELKHRTALASLLGTT 538 (1045)
Q Consensus 481 ~l------~~~f~~~---~----~~~~~sv---------i~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~lG~~ 538 (1045)
.. ..+.+.+ . ..+..++ ++.....|++|++..+++..+++.|+++.
T Consensus 521 ~~ig~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~------------ 588 (741)
T PRK11033 521 VLICAPGKLPPLADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGV------------ 588 (741)
T ss_pred EEEecchhhhhccHHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEE------------
Confidence 00 0000000 0 0012222 22333467889999999999988887743
Q ss_pred CCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccc
Q psy15803 539 NNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGV 618 (1045)
Q Consensus 539 ~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGi 618 (1045)
+++|+.-.... .++....--++++++|+||..+|+.+|+. +.|+|||||+||+|||++|||||
T Consensus 589 ------llTGd~~~~a~---------~ia~~lgi~~~~~~~p~~K~~~v~~l~~~--~~v~mvGDgiNDapAl~~A~vgi 651 (741)
T PRK11033 589 ------MLTGDNPRAAA---------AIAGELGIDFRAGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAMKAASIGI 651 (741)
T ss_pred ------EEcCCCHHHHH---------HHHHHcCCCeecCCCHHHHHHHHHHHhcC--CCEEEEECCHHhHHHHHhCCeeE
Confidence 34444322211 11111121267889999999999999964 58999999999999999999999
Q ss_pred cc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHH
Q psy15803 619 GI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMEL 676 (1045)
Q Consensus 619 gi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 676 (1045)
++ +|++.+++++|+++..+++..|.+++ ..||.+++++++++.|.+.+|+++....+
T Consensus 652 a~g~~~~~a~~~adivl~~~~l~~l~~~i-~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 652 AMGSGTDVALETADAALTHNRLRGLAQMI-ELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred EecCCCHHHHHhCCEEEecCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77 68999999999999999999999999 89999999999999999999987754443
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-53 Score=507.32 Aligned_cols=452 Identities=16% Similarity=0.185 Sum_probs=346.1
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHhhhhhhh---cccEEEEEEC-CeEEEEeecccccCeEEEecCCCccceeEEEE
Q psy15803 104 GRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEI---NHRSVDVIRN-GMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVL 179 (1045)
Q Consensus 104 ~~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~~---n~~~~~V~r~-g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill 179 (1045)
++|.++..+++++.++.+.|.+...|..+..+++ .+.+++++|+ |++++|+.++|+|||+|.|++||.|||||+|+
T Consensus 52 ~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~ 131 (562)
T TIGR01511 52 TFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVI 131 (562)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEE
Confidence 3566666777777777777777776776665544 4567999885 66799999999999999999999999999999
Q ss_pred eecCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceee
Q psy15803 180 STSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILL 259 (1045)
Q Consensus 180 ~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~ 259 (1045)
+|+ +.||||+|||||.|+.|++++.+ |+||++.+|.
T Consensus 132 ~g~-----~~vdes~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~g~------------ 167 (562)
T TIGR01511 132 EGE-----SEVDESLVTGESLPVPKKVGDPV---------------------------IAGTVNGTGS------------ 167 (562)
T ss_pred ECc-----eEEehHhhcCCCCcEEcCCCCEE---------------------------EeeeEECCce------------
Confidence 965 89999999999999999998776 9999999998
Q ss_pred ccceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcc
Q psy15803 260 RGSMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWY 336 (1045)
Q Consensus 260 ~G~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 336 (1045)
+.+.|+++|.+|.++++.+ .++.+++++++..++++.+++++++++++++++.|.
T Consensus 168 ----------~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------ 225 (562)
T TIGR01511 168 ----------LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------ 225 (562)
T ss_pred ----------EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 7899999999999888776 667788999999999999999999888887776542
Q ss_pred ccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCC
Q psy15803 337 LLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTG 416 (1045)
Q Consensus 337 ~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTG 416 (1045)
..+.+++++++..|||+|+++++++...+..++ +++|+++|+++.+|.|+++++|||||||
T Consensus 226 ---------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l~~v~~i~fDKTG 286 (562)
T TIGR01511 226 ---------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERAANIDTVVFDKTG 286 (562)
T ss_pred ---------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHhhCCCEEEECCCC
Confidence 278889999999999999999999999999988 8899999999999999999999999999
Q ss_pred ccccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhc-------eeeeecCCc---------
Q psy15803 417 TLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVC-------HTVCSVAGN--------- 480 (1045)
Q Consensus 417 TLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c-------~~v~~~~~~--------- 480 (1045)
|||+|+|++.++...+.. ...++.........+.. ||..+.+...+... ..+....+.
T Consensus 287 TLT~g~~~v~~i~~~~~~-----~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~g~ 360 (562)
T TIGR01511 287 TLTQGKPTVTDVHVFGDR-----DRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGTVEGT 360 (562)
T ss_pred CCcCCCEEEEEEecCCCC-----CHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEEECCE
Confidence 999999999998653321 12222222111111222 45555444332211 011111111
Q ss_pred -ee------e----cccCCCCcccceEE---------EEecCCCCchhHHHHHHHHHHHHHhhhhhhHHHHHHHcCCCCC
Q psy15803 481 -IL------V----PNFNSNNVKEQSRM---------IARNPSIEPVVREFLTMLAVCHTVYIELKHRTALASLLGTTNN 540 (1045)
Q Consensus 481 -~l------~----~~f~~~~~~~~~sv---------i~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~lG~~~~ 540 (1045)
+. . .+.+... ++..++ ++.....+++++++.+++..+++.|+++
T Consensus 361 ~~~iG~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v--------------- 424 (562)
T TIGR01511 361 KIQLGNEKLLGENAIKIDGKA-EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEP--------------- 424 (562)
T ss_pred EEEEECHHHHHhCCCCCChhh-hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeE---------------
Confidence 00 0 0000000 011122 2222336788999999999998888763
Q ss_pred CceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc
Q psy15803 541 NYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI 620 (1045)
Q Consensus 541 ~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi 620 (1045)
.+++|+.-..... ++.....-+++++.|++|.++++.+++. ++.|+|+|||.||++|+++|||||++
T Consensus 425 ---~ilSgd~~~~a~~---------ia~~lgi~~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~ 491 (562)
T TIGR01511 425 ---VMLTGDNRKTAKA---------VAKELGINVRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAI 491 (562)
T ss_pred ---EEEcCCCHHHHHH---------HHHHcCCcEEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEe
Confidence 3445554322211 1111111178899999999999999987 89999999999999999999999955
Q ss_pred -cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHH
Q psy15803 621 -SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMEL 676 (1045)
Q Consensus 621 -~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 676 (1045)
.|++.+++++|..+..+++..|.+++ ..||.+++++++++.|.+.+|++.+...+
T Consensus 492 g~g~~~a~~~Advvl~~~~l~~l~~~i-~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 492 GAGTDVAIEAADVVLMRNDLNDVATAI-DLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred CCcCHHHHhhCCEEEeCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999 89999999999999999999998755444
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-54 Score=508.87 Aligned_cols=457 Identities=18% Similarity=0.187 Sum_probs=353.9
Q ss_pred HHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHhhhhhhh---cccEEEEEECCeEEEEeecccccCeEE
Q psy15803 88 FLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEI---NHRSVDVIRNGMIYVEQWKDLKVGDIV 164 (1045)
Q Consensus 88 fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV 164 (1045)
++++++++++ .+.|..+..++++++++...+.++++|..+..+++ ++.+++|+|+|+++++++++|+|||+|
T Consensus 5 ~~~a~~~~~~-----~~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv 79 (536)
T TIGR01512 5 MALAALGAVA-----IGEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVV 79 (536)
T ss_pred HHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEE
Confidence 4444555554 34567778888888888889989888888776554 567899999999999999999999999
Q ss_pred EecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEe
Q psy15803 165 KVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKE 244 (1045)
Q Consensus 165 ~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~ 244 (1045)
.|++||.|||||+|++|+ +.||||+|||||.|+.|.+++.. |+||.+.
T Consensus 80 ~v~~G~~iP~Dg~ii~g~-----~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~ 127 (536)
T TIGR01512 80 VVKPGERVPVDGVVLSGT-----STVDESALTGESVPVEKAPGDEV---------------------------FAGAINL 127 (536)
T ss_pred EEcCCCEeecceEEEeCc-----EEEEecccCCCCCcEEeCCCCEE---------------------------EeeeEEC
Confidence 999999999999999964 89999999999999999987655 9999999
Q ss_pred cCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15803 245 RGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAA 321 (1045)
Q Consensus 245 ~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i 321 (1045)
+|. +.+.|++||.+|.++++.+ .++.+++++++.+++++.++.+++++++++.++
T Consensus 128 ~G~----------------------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (536)
T TIGR01512 128 DGV----------------------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWL 185 (536)
T ss_pred Cce----------------------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 7899999999999998876 556678999999999999999999888887776
Q ss_pred hhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchh
Q psy15803 322 ASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLN 401 (1045)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~ 401 (1045)
.+.+.. .+...+.+++++++..|||+|+++++++...+..++ +++++++|+++.+
T Consensus 186 ~~~~~~---------------~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~~~l 240 (536)
T TIGR01512 186 VPGLLK---------------RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGGAAL 240 (536)
T ss_pred HHHHhc---------------ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCcHHH
Confidence 654321 112278889999999999999999999999999988 8899999999999
Q ss_pred hhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhc---eeeeecC
Q psy15803 402 EELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVC---HTVCSVA 478 (1045)
Q Consensus 402 e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c---~~v~~~~ 478 (1045)
|.+|+++++|||||||||+|+|++.++... ++.........+. .||..+.+...+... ..+....
T Consensus 241 e~l~~v~~i~fDKTGTLT~~~~~v~~~~~~-----------~~l~~a~~~e~~~-~hp~~~Ai~~~~~~~~~~~~~~~~~ 308 (536)
T TIGR01512 241 EALAKIKTVAFDKTGTLTTGRPKVVDVVPA-----------EVLRLAAAAEQAS-SHPLARAIVDYARKRENVESVEEVP 308 (536)
T ss_pred HhhcCCCEEEECCCCCCcCCceEEEEeeHH-----------HHHHHHHHHhccC-CCcHHHHHHHHHHhcCCCcceEEec
Confidence 999999999999999999999999988532 1111111111111 134444333322110 0010000
Q ss_pred C----------ceeec--cc---------CCCC-----cccceEEEEecCCCCchhHHHHHHHHHHHHHhh-hhhhHH--
Q psy15803 479 G----------NILVP--NF---------NSNN-----VKEQSRMIARNPSIEPVVREFLTMLAVCHTVYI-ELKHRT-- 529 (1045)
Q Consensus 479 ~----------~~l~~--~f---------~~~~-----~~~~~svi~~~~~~~~~~~~~~~ti~~~~~~~~-~~~~~~-- 529 (1045)
+ +++.- +| .... +.+.....+.....|+++++..+++..++++|+ ++.+.+
T Consensus 309 g~gi~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd 388 (536)
T TIGR01512 309 GEGVRAVVDGGEVRIGNPRSLEAAVGARPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGD 388 (536)
T ss_pred CCeEEEEECCeEEEEcCHHHHhhcCCcchhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCC
Confidence 1 00000 00 0000 001112222233467899999999999999988 633322
Q ss_pred ------HHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecC
Q psy15803 530 ------ALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGD 603 (1045)
Q Consensus 530 ------~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGD 603 (1045)
..++.+|+.. +++++.|++|..+++.+++. ++.|+|+||
T Consensus 389 ~~~~a~~i~~~lgi~~----------------------------------~f~~~~p~~K~~~i~~l~~~-~~~v~~vGD 433 (536)
T TIGR01512 389 RRAVAERVARELGIDE----------------------------------VHAELLPEDKLEIVKELREK-YGPVAMVGD 433 (536)
T ss_pred CHHHHHHHHHHcCChh----------------------------------hhhccCcHHHHHHHHHHHhc-CCEEEEEeC
Confidence 3355555543 78899999999999999988 899999999
Q ss_pred CccChHHHHhccccccc--cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHH
Q psy15803 604 GANDVAMIQKAHVGVGI--SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMEL 676 (1045)
Q Consensus 604 G~ND~~al~~AdVGigi--~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 676 (1045)
|.||++|+++|||||++ .|++.+++++|..+..+++..|.+++ ..||.+++++++++.|.+.+|++.+...+
T Consensus 434 g~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i-~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 507 (536)
T TIGR01512 434 GINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAI-RLARRTRRIVKQNVVIALGIILLLILLAL 507 (536)
T ss_pred CHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999965 47899999999999999999999988 89999999999999999999987755543
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-52 Score=501.47 Aligned_cols=453 Identities=17% Similarity=0.183 Sum_probs=349.3
Q ss_pred cCCcchhhhHHHHHHHHHHHHHHHHHHHhhhhhhh---cccEEEEEECC-eEEEEeecccccCeEEEecCCCccceeEEE
Q psy15803 103 TGRYTTLIPLILIMVVSGIKEIIEDIKRHLADGEI---NHRSVDVIRNG-MIYVEQWKDLKVGDIVKVYNNSFFPGDLMV 178 (1045)
Q Consensus 103 ~~~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~~---n~~~~~V~r~g-~~~~i~~~~l~vGDIV~l~~ge~vPaD~il 178 (1045)
.+.|.++..++++++++...+.+++++..+..+++ ++..++|+|+| ++++|++++|+|||+|.+++||.|||||+|
T Consensus 15 ~~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 94 (556)
T TIGR01525 15 MGLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVV 94 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEE
Confidence 35677888888888899888888888888876554 46679999996 999999999999999999999999999999
Q ss_pred EeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCcccee
Q psy15803 179 LSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERIL 258 (1045)
Q Consensus 179 l~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l 258 (1045)
++|+ +.||||+|||||.|+.|.+++.+ |+||.+.+|.
T Consensus 95 i~g~-----~~vdes~lTGEs~pv~k~~g~~v---------------------------~aGt~v~~g~----------- 131 (556)
T TIGR01525 95 ISGE-----SEVDESALTGESMPVEKKEGDEV---------------------------FAGTINGDGS----------- 131 (556)
T ss_pred Eecc-----eEEeehhccCCCCCEecCCcCEE---------------------------eeceEECCce-----------
Confidence 9964 88999999999999999987655 9999999998
Q ss_pred eccceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCc
Q psy15803 259 LRGSMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDW 335 (1045)
Q Consensus 259 ~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 335 (1045)
+.+.|++||.+|.++++.+ ..+.+++++++.+++++.++.++.+++++++++++.+...
T Consensus 132 -----------~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~------- 193 (556)
T TIGR01525 132 -----------LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA------- 193 (556)
T ss_pred -----------EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 7899999999999998876 4566789999999999999999999999888877654311
Q ss_pred cccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCC
Q psy15803 336 YLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKT 415 (1045)
Q Consensus 336 ~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKT 415 (1045)
. ..+.+++++++..|||+|+++++++...+..++ +++++++|+++.+|.||++|++|||||
T Consensus 194 -------~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~~~~le~l~~v~~i~fDKT 254 (556)
T TIGR01525 194 -------L--GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKGGDALEKLAKVKTVVFDKT 254 (556)
T ss_pred -------c--hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecCchHHHHhhcCCEEEEeCC
Confidence 0 478899999999999999999999999999988 889999999999999999999999999
Q ss_pred CccccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHh---hce----eeeecC---------C
Q psy15803 416 GTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLA---VCH----TVCSVA---------G 479 (1045)
Q Consensus 416 GTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~c~----~v~~~~---------~ 479 (1045)
||||+|+|++.++...+... ....++.........+. .||....+...+. .-. ...... +
T Consensus 255 GTLT~~~~~v~~~~~~~~~~---~~~~~~l~~a~~~e~~~-~hp~~~Ai~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~g 330 (556)
T TIGR01525 255 GTLTTGKPTVVDVEPLDDAS---ISEEELLALAAALEQSS-SHPLARAIVRYAKKRGLELPKQEDVEEVPGKGVEATVDG 330 (556)
T ss_pred CCCcCCceEEEEEEecCCCC---ccHHHHHHHHHHHhccC-CChHHHHHHHHHHhcCCCcccccCeeEecCCeEEEEECC
Confidence 99999999999987644221 00122222111111111 1343333332221 100 000000 1
Q ss_pred --cee-----ecccCCCC-----------cccceEEEEe---------cCCCCchhHHHHHHHHHHHHHh-hhhhhHH--
Q psy15803 480 --NIL-----VPNFNSNN-----------VKEQSRMIAR---------NPSIEPVVREFLTMLAVCHTVY-IELKHRT-- 529 (1045)
Q Consensus 480 --~~l-----~~~f~~~~-----------~~~~~svi~~---------~~~~~~~~~~~~~ti~~~~~~~-~~~~~~~-- 529 (1045)
+.. ..+++... .++..+++.. ....++++++..++++.+++.| +++.+.+
T Consensus 331 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd 410 (556)
T TIGR01525 331 QEEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGD 410 (556)
T ss_pred eeEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCC
Confidence 010 00111000 0012222221 2224688888888898888887 6632211
Q ss_pred ------HHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecC
Q psy15803 530 ------ALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGD 603 (1045)
Q Consensus 530 ------~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGD 603 (1045)
++++.+|+.. +++++.|++|.++++.+++. ++.|+|+||
T Consensus 411 ~~~~a~~i~~~lgi~~----------------------------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vGD 455 (556)
T TIGR01525 411 NRSAAEAVAAELGIDE----------------------------------VHAELLPEDKLAIVKELQEE-GGVVAMVGD 455 (556)
T ss_pred CHHHHHHHHHHhCCCe----------------------------------eeccCCHHHHHHHHHHHHHc-CCEEEEEEC
Confidence 2344444432 88999999999999999987 789999999
Q ss_pred CccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHH
Q psy15803 604 GANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVME 675 (1045)
Q Consensus 604 G~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 675 (1045)
|.||++|+++||||++. .+++.+++++|..+..+++..|.+++ ..||..++++++++.|.+.+|++.+...
T Consensus 456 g~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~~~i-~~~r~~~~~i~~nl~~a~~~N~~~i~~a 527 (556)
T TIGR01525 456 GINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAI-DLSRKTRRIIKQNLAWALGYNLVAIPLA 527 (556)
T ss_pred ChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999955 57899999999999999999999999 8999999999999999999999885443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-52 Score=518.05 Aligned_cols=454 Identities=15% Similarity=0.176 Sum_probs=348.8
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhhhhhhh---cccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEee
Q psy15803 105 RYTTLIPLILIMVVSGIKEIIEDIKRHLADGEI---NHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLST 181 (1045)
Q Consensus 105 ~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~ 181 (1045)
+|.++..+++++.++.+.|.+...|..+..+++ .+.+++|+|+|++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 445567777788888777777777777666554 46779999999999999999999999999999999999999996
Q ss_pred cCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeecc
Q psy15803 182 SENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRG 261 (1045)
Q Consensus 182 s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G 261 (1045)
+ +.||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 365 ~-----~~vdeS~lTGEs~pv~k~~gd~V---------------------------~aGt~~~~G~-------------- 398 (834)
T PRK10671 365 E-----AWLDEAMLTGEPIPQQKGEGDSV---------------------------HAGTVVQDGS-------------- 398 (834)
T ss_pred e-----EEEeehhhcCCCCCEecCCCCEE---------------------------Eecceeccee--------------
Confidence 4 89999999999999999998876 9999999998
Q ss_pred ceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcccc
Q psy15803 262 SMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLL 338 (1045)
Q Consensus 262 ~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 338 (1045)
+.+.|+++|.+|.++++.+ .++..++++++..++++.++++++++++++++++|.+...
T Consensus 399 --------~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~---------- 460 (834)
T PRK10671 399 --------VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP---------- 460 (834)
T ss_pred --------EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------
Confidence 7899999999998888765 5667789999999999999999999988888777643210
Q ss_pred CCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCcc
Q psy15803 339 SRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTL 418 (1045)
Q Consensus 339 ~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTL 418 (1045)
...+...+.++++++++.|||+|+++++++...+..++ +++|+++|+++.+|.|++++++||||||||
T Consensus 461 --~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v~~v~fDKTGTL 528 (834)
T PRK10671 461 --APQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTLDTLVFDKTGTL 528 (834)
T ss_pred --chHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCCCEEEEcCCCcc
Confidence 01244578889999999999999999999999999988 889999999999999999999999999999
Q ss_pred ccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhc--e-----------eeee-cCCc-ee-
Q psy15803 419 TRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVC--H-----------TVCS-VAGN-IL- 482 (1045)
Q Consensus 419 T~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c--~-----------~v~~-~~~~-~l- 482 (1045)
|+|+|++.++...+. .....+........... .||..+.+....... . .+.. .++. ++
T Consensus 529 T~g~~~v~~~~~~~~-----~~~~~~l~~a~~~e~~s-~hp~a~Ai~~~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~~ 602 (834)
T PRK10671 529 TEGKPQVVAVKTFNG-----VDEAQALRLAAALEQGS-SHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLL 602 (834)
T ss_pred ccCceEEEEEEccCC-----CCHHHHHHHHHHHhCCC-CCHHHHHHHHHHhhCCCCCcccceEecceEEEEEECCEEEEE
Confidence 999999998764321 11122222111111111 145544443322100 0 0000 0010 00
Q ss_pred -----e--cccCCCC--------cccceE---------EEEecCCCCchhHHHHHHHHHHHHHhhhhhhHH--------H
Q psy15803 483 -----V--PNFNSNN--------VKEQSR---------MIARNPSIEPVVREFLTMLAVCHTVYIELKHRT--------A 530 (1045)
Q Consensus 483 -----~--~~f~~~~--------~~~~~s---------vi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~ 530 (1045)
. .+..... ..+... +++.....|+++++..+++..+++.|+++.+.+ .
T Consensus 603 G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ 682 (834)
T PRK10671 603 GNQALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA 682 (834)
T ss_pred eCHHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 0 0000000 001112 122233467888888888888888877633322 2
Q ss_pred HHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHH
Q psy15803 531 LASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAM 610 (1045)
Q Consensus 531 ~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~a 610 (1045)
+++.+|+.. +++++.|++|.++++.++.+ ++.|+|+|||.||++|
T Consensus 683 ia~~lgi~~----------------------------------~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~a 727 (834)
T PRK10671 683 IAKEAGIDE----------------------------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPA 727 (834)
T ss_pred HHHHcCCCE----------------------------------EEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHH
Confidence 344444432 89999999999999999988 8899999999999999
Q ss_pred HHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHH
Q psy15803 611 IQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMEL 676 (1045)
Q Consensus 611 l~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 676 (1045)
+++|||||++ .|++.+++++|.++..+++..|..++ ..||..++++++++.|.+.+|++.+...+
T Consensus 728 l~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i-~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 728 LAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADAL-AISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999966 68899999999999999999999999 89999999999999999999998855443
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=355.97 Aligned_cols=516 Identities=16% Similarity=0.179 Sum_probs=325.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhhhc----ccEEEEEEC-CeEEEEeecccccCeEEEecCCCccceeEEEEeecCCC
Q psy15803 111 PLILIMVVSGIKEIIEDIKRHLADGEIN----HRSVDVIRN-GMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENE 185 (1045)
Q Consensus 111 ~l~~i~~i~~i~~~~~~~~~~~~~~~~n----~~~~~V~r~-g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~ 185 (1045)
.|+|.+++.-+-|.+.+-|.+.+...+. ...++++++ |+++.+++.+|+.||+|.|+.||.||+||.+++|.
T Consensus 71 ~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~--- 147 (681)
T COG2216 71 ILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGV--- 147 (681)
T ss_pred HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeee---
Confidence 3445555555666666655554433332 233666766 89999999999999999999999999999999955
Q ss_pred ceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceee
Q psy15803 186 GMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLR 265 (1045)
Q Consensus 186 g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~ 265 (1045)
++||||.+||||-|+.|.++-..+.. -.||.++
T Consensus 148 --asVdESAITGESaPViresGgD~ssV------------------------tGgT~v~--------------------- 180 (681)
T COG2216 148 --ASVDESAITGESAPVIRESGGDFSSV------------------------TGGTRVL--------------------- 180 (681)
T ss_pred --eecchhhccCCCcceeeccCCCcccc------------------------cCCcEEe---------------------
Confidence 89999999999999999987543211 2344444
Q ss_pred cCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCc
Q psy15803 266 NTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNP 342 (1045)
Q Consensus 266 nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 342 (1045)
++|+...++..-.+|.+-++.. .+..+++|-|-.++.+...+.++.++.. ++..-...| ..
T Consensus 181 -SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~-~Tl~p~a~y----------~~---- 244 (681)
T COG2216 181 -SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAV-ATLYPFAIY----------SG---- 244 (681)
T ss_pred -eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHH-HhhhhHHHH----------cC----
Confidence 4568888888888887766554 6677777766666555443333222211 111111111 10
Q ss_pred hhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccce
Q psy15803 343 SFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNV 422 (1045)
Q Consensus 343 ~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~ 422 (1045)
.-...+...+.++++++|....--++..-..++-++ .+.+++.++..++|..|.||++..|||||+|-|+
T Consensus 245 g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv----------~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~Gn 314 (681)
T COG2216 245 GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV----------TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGN 314 (681)
T ss_pred CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh----------hhhceeecCcchhhhcCCccEEEecccCceeecc
Confidence 011245667889999999888877777666777766 7789999999999999999999999999999888
Q ss_pred EEEEEEEEcCccccCCCCCchhHhhhh---hhcCCCCchHHHHHHHHHHhhceeeeecCC---ceeecccCCCCcccceE
Q psy15803 423 MEFKICSVAGNILVPNFNSNNVQEQSR---MIARNPSIEPVVREFLTMLAVCHTVCSVAG---NILVPNFNSNNVKEQSR 496 (1045)
Q Consensus 423 m~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~---~~l~~~f~~~~~~~~~s 496 (1045)
-.-.++...+.. ...++...+. +..+.|.. ..+..+.+-+.. . ..+.+ +.-..||+.+ -|||
T Consensus 315 R~A~~f~p~~gv-----~~~~la~aa~lsSl~DeTpEG-rSIV~LA~~~~~--~-~~~~~~~~~~~fvpFtA~---TRmS 382 (681)
T COG2216 315 RQASEFIPVPGV-----SEEELADAAQLASLADETPEG-RSIVELAKKLGI--E-LREDDLQSHAEFVPFTAQ---TRMS 382 (681)
T ss_pred hhhhheecCCCC-----CHHHHHHHHHHhhhccCCCCc-ccHHHHHHHhcc--C-CCcccccccceeeeccee---cccc
Confidence 666665543322 1222222211 11222221 112222221110 0 00001 0113466655 3565
Q ss_pred EEEecCCCCchhHHHHHHHHHH-HHHhh-h----------------------------------------hhhHHHHHHH
Q psy15803 497 MIARNPSIEPVVREFLTMLAVC-HTVYI-E----------------------------------------LKHRTALASL 534 (1045)
Q Consensus 497 vi~~~~~~~~~~~~~~~ti~~~-~~~~~-~----------------------------------------~~~~~~~~~~ 534 (1045)
=+-... +..+|..+..++... ++.+- - +..|-+.++.
T Consensus 383 Gvd~~~-~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~ 461 (681)
T COG2216 383 GVDLPG-GREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRK 461 (681)
T ss_pred cccCCC-CceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHHh
Confidence 432221 233444333322211 11100 0 1111123444
Q ss_pred cCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhc
Q psy15803 535 LGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKA 614 (1045)
Q Consensus 535 lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~A 614 (1045)
.|+. .+.++|+.--.+-.-.-+..+.+ +.|+++|++|.++|+.-|.. |+.|+|+|||.||+|||.+|
T Consensus 462 MgIk----TvM~TGDN~~TAa~IA~EAGVDd--------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqA 528 (681)
T COG2216 462 MGIK----TVMITGDNPLTAAAIAAEAGVDD--------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQA 528 (681)
T ss_pred cCCe----EEEEeCCCHHHHHHHHHHhCchh--------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhc
Confidence 5544 35667764322211111112222 78999999999999999999 99999999999999999999
Q ss_pred cccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHH---HHHHHHHHHhCCC-----
Q psy15803 615 HVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLY---VMELWFAIYSGWS----- 685 (1045)
Q Consensus 615 dVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~---~~~~~~~~~~~~s----- 685 (1045)
|||+++ +|+.+|++|++++=++.+.-.|.+.+ ..|+...-.--.+..|++...+.-. +|.++++++-...
T Consensus 529 dVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV-~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM 607 (681)
T COG2216 529 DVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVV-EIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIM 607 (681)
T ss_pred chhhhhccccHHHHHhhcccccCCCccceehHh-hhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeec
Confidence 999998 79999999999999999999999999 7899888777778888887776543 4455555542221
Q ss_pred -cchhhhh-HHHHHHHH--HhhhhhhhhhhcccccCChhhhhcC-Cccc
Q psy15803 686 -GQVLFER-WTIGLYNV--LFTAFPPLAIGILDQVCSARTRLKY-PILY 729 (1045)
Q Consensus 686 -~~~~~~~-~~l~~~n~--~~t~~p~~~~~~~~~d~~~~~~~~~-p~ly 729 (1045)
-++|.++ ..-+.||- +.-.+|.-.-|+--+..+...++++ --.|
T Consensus 608 ~L~sP~SAilSAlIfNAlIIv~LIPLAlkGVkyk~~~a~~lL~rNl~iY 656 (681)
T COG2216 608 HLHSPQSAILSALIFNALIIVALIPLALKGVKYKPLSASALLRRNLLIY 656 (681)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhCeEEE
Confidence 1122222 23466773 3455677777888888887766543 3344
|
|
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=389.90 Aligned_cols=241 Identities=51% Similarity=0.840 Sum_probs=223.7
Q ss_pred cchhhhhhhhhcccccccccc-ccc-cccccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeecccc
Q psy15803 801 EPVVREFLTMLAVCHTVIPEM-KDG-VLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTS 878 (1045)
Q Consensus 801 ~~~~~~~l~~~slc~~a~~~~-~~~-~~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s 878 (1045)
....+.+..+.++||++.++. ++. ...|.+.+|||.|++..|+.+|+.+..|+++.+.+...+..++|+++++++|+|
T Consensus 460 ~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S 539 (1151)
T KOG0206|consen 460 AEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNS 539 (1151)
T ss_pred cchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEecccc
Confidence 334557888999999999887 333 567888999999999999999999999999999988777788999999999999
Q ss_pred ccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc-cCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHh
Q psy15803 879 DRKRMSVIVRTPQNEIKVFCKGADNMILSRLD-SHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAA 957 (1045)
Q Consensus 879 ~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~-~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~ 957 (1045)
.||||||||++|+|++.+|+|||+.+|++++. ...+..++..++++.||.+|+|+||+|||+++++||.+|.+++++|+
T Consensus 540 ~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ 619 (1151)
T KOG0206|consen 540 TRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAK 619 (1151)
T ss_pred ccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 44566788889999999999999999999999999999999999999
Q ss_pred hcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEe
Q psy15803 958 TSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLD 1037 (1045)
Q Consensus 958 ~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~ 1037 (1045)
.+++||++.+++..+.+|+||+++|.+++||+||+|||++|+.|++||||+||+|||+.+||++||.+|+++++++..++
T Consensus 620 ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~ 699 (1151)
T KOG0206|consen 620 TSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLII 699 (1151)
T ss_pred hhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred ecCC
Q psy15803 1038 LDGY 1041 (1045)
Q Consensus 1038 i~g~ 1041 (1045)
+.-.
T Consensus 700 i~~~ 703 (1151)
T KOG0206|consen 700 INTE 703 (1151)
T ss_pred EecC
Confidence 6543
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=383.47 Aligned_cols=237 Identities=41% Similarity=0.715 Sum_probs=215.7
Q ss_pred hhhhhhhcccccccccccc---c----cccccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccc
Q psy15803 805 REFLTMLAVCHTVIPEMKD---G----VLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFT 877 (1045)
Q Consensus 805 ~~~l~~~slc~~a~~~~~~---~----~~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~ 877 (1045)
..++.++++||++.+...+ . ...|.++||||.||+++|+++|+.+..|+++.+.++..+.+.+|++++++||+
T Consensus 533 ~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~ 612 (1178)
T PLN03190 533 HDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFD 612 (1178)
T ss_pred HHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEeccc
Confidence 4678889999999874211 1 13477789999999999999999999999999999998999999999999999
Q ss_pred cccceEEEEEEcCCCcEEEEEeCCcHHHHHHhccC--chhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHH
Q psy15803 878 SDRKRMSVIVRTPQNEIKVFCKGADNMILSRLDSH--SKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKN 955 (1045)
Q Consensus 878 s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~ 955 (1045)
|+||||||+++++++++++|+|||||.|+++|+.. ...++++.+++++|+++|+|||++|||.++++++.+|...+++
T Consensus 613 S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~ 692 (1178)
T PLN03190 613 SDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEA 692 (1178)
T ss_pred ccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHH
Confidence 99999999999888889999999999999999742 3456788899999999999999999999999999999999999
Q ss_pred HhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCe
Q psy15803 956 AATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPL 1035 (1045)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~ 1035 (1045)
+..++.+|++.++...+++|+||+++|+++++||||++++++|++|++|||+|||+|||+++||++||++|||++++.+.
T Consensus 693 a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~ 772 (1178)
T PLN03190 693 ASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772 (1178)
T ss_pred hhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred EeecCC
Q psy15803 1036 LDLDGY 1041 (1045)
Q Consensus 1036 ~~i~g~ 1041 (1045)
+++.+.
T Consensus 773 i~i~~~ 778 (1178)
T PLN03190 773 IIINSN 778 (1178)
T ss_pred EEecCC
Confidence 777554
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=384.85 Aligned_cols=237 Identities=53% Similarity=0.852 Sum_probs=209.9
Q ss_pred hhhhhhhccccccccccccc---cccccCCChhHHHHHHHHHHcCeEEeccccce--eeeecccccceeEEEEeeccccc
Q psy15803 805 REFLTMLAVCHTVIPEMKDG---VLQYHASSPDEKALILGAKAFGYVFTSKHYKE--IEITALGETQRYVILNVLEFTSD 879 (1045)
Q Consensus 805 ~~~l~~~slc~~a~~~~~~~---~~~~~~g~p~e~all~~a~~~g~~~~~~~~~~--~~~~~~~~~~~~~il~~~~F~s~ 879 (1045)
..++.++++||++.+...+. ...|..+||+|.||+++|+..|+.+.+++.+. +.++..+....|++++++||+|+
T Consensus 441 ~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~ 520 (1057)
T TIGR01652 441 NEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSD 520 (1057)
T ss_pred HHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCC
Confidence 36777889999988764111 13466799999999999999999999888773 34556677789999999999999
Q ss_pred cceEEEEEEcCCCcEEEEEeCCcHHHHHHhcc-CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhh
Q psy15803 880 RKRMSVIVRTPQNEIKVFCKGADNMILSRLDS-HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAAT 958 (1045)
Q Consensus 880 ~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~ 958 (1045)
||||||+++++++++++|+|||||.|+++|+. .++.++++.+++++|+.+|+|||++|||.++++++.+|.++|++++.
T Consensus 521 rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~ 600 (1057)
T TIGR01652 521 RKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEAST 600 (1057)
T ss_pred CCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 99999999988888999999999999999974 33456788899999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEee
Q psy15803 959 SMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLDL 1038 (1045)
Q Consensus 959 ~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~i 1038 (1045)
...+|++.++..++++|+||+|+|++|++||||++|+++|++||+|||+|||+|||+++||++||++|||++++.+.+.+
T Consensus 601 ~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i 680 (1057)
T TIGR01652 601 ALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVI 680 (1057)
T ss_pred hhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEE
Confidence 88999999999899999999999999999999999999999999999999999999999999999999999887665555
Q ss_pred cCC
Q psy15803 1039 DGY 1041 (1045)
Q Consensus 1039 ~g~ 1041 (1045)
+++
T Consensus 681 ~~~ 683 (1057)
T TIGR01652 681 TSE 683 (1057)
T ss_pred ecC
Confidence 553
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=320.98 Aligned_cols=267 Identities=35% Similarity=0.552 Sum_probs=226.5
Q ss_pred CcccccCCccccceeeeEEEEEEee--------eee-----------eeeecCCCcchhhhhhhhhccccccccccccc-
Q psy15803 765 QGTIWANGKDGGYLVLGNIVYTVTE--------QSR-----------MIARNPSIEPVVREFLTMLAVCHTVIPEMKDG- 824 (1045)
Q Consensus 765 ~~~~~~ng~~~d~~~~g~~v~tV~~--------k~~-----------~~~~~~s~~~~~~~~l~~~slc~~a~~~~~~~- 824 (1045)
.+.+++|.+..-....|...|+... +.. ....--....-.+..+.++++||++.|..++.
T Consensus 415 TGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~g 494 (1051)
T KOG0210|consen 415 TGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDG 494 (1051)
T ss_pred cCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCc
Confidence 3567788877777778887777110 000 00000112234556778899999999987654
Q ss_pred cccccCCChhHHHHHHHHHHcCeEEeccccceeeeec-ccccceeEEEEeeccccccceEEEEEEcC-CCcEEEEEeCCc
Q psy15803 825 VLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITA-LGETQRYVILNVLEFTSDRKRMSVIVRTP-QNEIKVFCKGAD 902 (1045)
Q Consensus 825 ~~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~-~~~~~~~~il~~~~F~s~~k~msvvv~~~-~~~~~~~~KGa~ 902 (1045)
-..|++.+|||.|+++|-+..|..+..|+.+.+.+.. .+...+|+|+..|||+|++|||++||+++ .+++..|.|||+
T Consensus 495 e~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD 574 (1051)
T KOG0210|consen 495 EVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGAD 574 (1051)
T ss_pred eEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecch
Confidence 5678889999999999999999999999999888754 45677999999999999999999999987 678999999999
Q ss_pred HHHHHHhccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHH-hhccCeEEE
Q psy15803 903 NMILSRLDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCE-MIETKLHLL 981 (1045)
Q Consensus 903 e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~l~~l 981 (1045)
-+|..... .-+.+++...+||++|+|+|++|+|.++++||+.|...|+.|+.++.||.+++...-+ .+|.||.++
T Consensus 575 ~VMs~iVq----~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL 650 (1051)
T KOG0210|consen 575 VVMSGIVQ----YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELL 650 (1051)
T ss_pred HHHhcccc----cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHh
Confidence 99987653 3467788889999999999999999999999999999999999999999999988766 899999999
Q ss_pred EEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCe
Q psy15803 982 GASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPL 1035 (1045)
Q Consensus 982 G~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~ 1035 (1045)
|++|.||+++++|+.+++.||+||||+||+|||+.+||++||++.++++.++.+
T Consensus 651 ~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~i 704 (1051)
T KOG0210|consen 651 GLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYI 704 (1051)
T ss_pred cccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceE
Confidence 999999999999999999999999999999999999999999999999887644
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=350.41 Aligned_cols=205 Identities=37% Similarity=0.569 Sum_probs=174.4
Q ss_pred hhhhhhccccccccccccccccccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEE
Q psy15803 806 EFLTMLAVCHTVIPEMKDGVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSV 885 (1045)
Q Consensus 806 ~~l~~~slc~~a~~~~~~~~~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msv 885 (1045)
.++...++||+..+... + .+..|||+|.||++++.+.|+.+ +.......|++++++||||+|||||+
T Consensus 391 ~~l~~~~lc~~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~----------~~~~~~~~~~~~~~~PFdS~rKrMsv 457 (917)
T COG0474 391 RFLLAAALCNSVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSL----------DLSGLEVEYPILAEIPFDSERKRMSV 457 (917)
T ss_pred HHHHHHHhcCccccccc-C--ceecCCccHHHHHHHHHhcCCcC----------CHHHHhhhcceeEEecCCCCceEEEE
Confidence 46677888998887655 3 66679999999999999988533 22334456789999999999999999
Q ss_pred EEEcCCCcEEEEEeCCcHHHHHHhcc-------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhh
Q psy15803 886 IVRTPQNEIKVFCKGADNMILSRLDS-------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAAT 958 (1045)
Q Consensus 886 vv~~~~~~~~~~~KGa~e~i~~~~~~-------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~ 958 (1045)
++++.++++++++|||||+|+++|+. .++.++.+.+..++|+++|+|||++|||.++.++..+
T Consensus 458 iv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~---------- 527 (917)
T COG0474 458 IVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD---------- 527 (917)
T ss_pred EEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc----------
Confidence 99977777999999999999999974 3456788999999999999999999999776553211
Q ss_pred cccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEee
Q psy15803 959 SMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLDL 1038 (1045)
Q Consensus 959 ~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~i 1038 (1045)
.. ++.|+||+|+|+++|+||||++++++|+.|++|||+||||||||++||++||++||+..+....+++
T Consensus 528 ----------~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi 596 (917)
T COG0474 528 ----------EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVI 596 (917)
T ss_pred ----------hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEe
Confidence 01 5678999999999999999999999999999999999999999999999999999998876534689
Q ss_pred cCCCCC
Q psy15803 1039 DGYSLD 1044 (1045)
Q Consensus 1039 ~g~~l~ 1044 (1045)
+|++|+
T Consensus 597 ~G~el~ 602 (917)
T COG0474 597 DGAELD 602 (917)
T ss_pred ehHHhh
Confidence 999886
|
|
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-32 Score=310.03 Aligned_cols=189 Identities=26% Similarity=0.371 Sum_probs=163.3
Q ss_pred ccccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHH
Q psy15803 826 LQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMI 905 (1045)
Q Consensus 826 ~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i 905 (1045)
.+.+.|+|||+|||.|+.++|. +.+..+.+.++++.+||+|.||||+++++.+++..++|+|||+|.+
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~------------~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiV 569 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGM------------DFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIV 569 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCc------------chHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHH
Confidence 4567799999999999999984 3445557788999999999999999999988877349999999999
Q ss_pred HHHhcc-----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChh--HHHhHHHHHHHHhhcccchHHHHHHHHH
Q psy15803 906 LSRLDS-----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEE--KYKNWSALYKNAATSMTNREERIAEVCE 972 (1045)
Q Consensus 906 ~~~~~~-----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 972 (1045)
+..|+. .++.++.+++.++.||++|+|++|+|||++... +..+|.. .+
T Consensus 570 L~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~ 630 (1034)
T KOG0204|consen 570 LKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EE 630 (1034)
T ss_pred HHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cc
Confidence 999964 345566888999999999999999999996544 2223321 14
Q ss_pred hhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEeecCCCCCC
Q psy15803 973 MIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLDLDGYSLDT 1045 (1045)
Q Consensus 973 ~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~i~g~~l~~ 1045 (1045)
..+.+|+++|++|++||.|||||++|+.|++|||+|.|+||||..||++||++|||++++.....++|.+|++
T Consensus 631 ~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~ 703 (1034)
T KOG0204|consen 631 LPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE 703 (1034)
T ss_pred cCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh
Confidence 5678999999999999999999999999999999999999999999999999999999998888999999863
|
|
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-32 Score=310.33 Aligned_cols=229 Identities=24% Similarity=0.322 Sum_probs=178.0
Q ss_pred cchhhhhhhhhccccccccccccccccc-cCCChhHHHHHHHHHHcCeEEeccccc-ee-e-eecccccceeEEEEeecc
Q psy15803 801 EPVVREFLTMLAVCHTVIPEMKDGVLQY-HASSPDEKALILGAKAFGYVFTSKHYK-EI-E-ITALGETQRYVILNVLEF 876 (1045)
Q Consensus 801 ~~~~~~~l~~~slc~~a~~~~~~~~~~~-~~g~p~e~all~~a~~~g~~~~~~~~~-~~-~-~~~~~~~~~~~il~~~~F 876 (1045)
...++.++.+.++||++....++. ..| ..|.|||.||..++++.|+.-...... +. . ....--...++..+++||
T Consensus 393 ~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpF 471 (972)
T KOG0202|consen 393 NDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPF 471 (972)
T ss_pred cHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeec
Confidence 334667888999999988776554 333 358999999999999998753221110 00 0 000112345566799999
Q ss_pred ccccceEEEEEEcCCCc--EEEEEeCCcHHHHHHhcc------------CchhHHHHHHHHHHHHHhcCeEEEEEEEecC
Q psy15803 877 TSDRKRMSVIVRTPQNE--IKVFCKGADNMILSRLDS------------HSKYVDETKTHLEQFASSGYRTLCFGVAKIP 942 (1045)
Q Consensus 877 ~s~~k~msvvv~~~~~~--~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~ 942 (1045)
||+||+|||.+.++.+. +.+|+|||+|.|+++|+. ++..++.+.+...+|+++|+|+||+|++..+
T Consensus 472 ssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~ 551 (972)
T KOG0202|consen 472 SSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSP 551 (972)
T ss_pred ccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCc
Confidence 99999999999976554 899999999999999953 2345788888999999999999999999877
Q ss_pred h-hHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Q psy15803 943 E-EKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAIN 1021 (1045)
Q Consensus 943 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ 1021 (1045)
. ...+ .+......+...|+||+|+|++|+.||||++++++|+.|++|||||+|||||+++||.+
T Consensus 552 ~~~~~~---------------~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~A 616 (972)
T KOG0202|consen 552 GQVPDD---------------QDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEA 616 (972)
T ss_pred ccChhh---------------hhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Confidence 4 1100 00111223577899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCccCCCCC--eEeecCCCCCC
Q psy15803 1022 IGYSSRLVGQDTP--LLDLDGYSLDT 1045 (1045)
Q Consensus 1022 ia~~~gi~~~~~~--~~~i~g~~l~~ 1045 (1045)
|||++||.+.+++ ...++|+|+|+
T Consensus 617 I~r~iGi~~~~ed~~~~~~TG~efD~ 642 (972)
T KOG0202|consen 617 IAREIGIFSEDEDVSSMALTGSEFDD 642 (972)
T ss_pred HHHHhCCCcCCccccccccchhhhhc
Confidence 9999999988763 34899999875
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=279.71 Aligned_cols=222 Identities=25% Similarity=0.403 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhcc---cE-EEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCce
Q psy15803 112 LILIMVVSGIKEIIEDIKRHLADGEINH---RS-VDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGM 187 (1045)
Q Consensus 112 l~~i~~i~~i~~~~~~~~~~~~~~~~n~---~~-~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~ 187 (1045)
|+++++++.+.+.++++++++.++++++ .+ ++|+|||++++++++||+|||+|.|++||.+||||+|++ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 6788888999999999999999877643 34 899999999999999999999999999999999999998 255
Q ss_pred EEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecC
Q psy15803 188 CYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNT 267 (1045)
Q Consensus 188 ~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt 267 (1045)
|+||||.||||+.|+.|.+. +.+.+|++++||.+. +
T Consensus 78 ~~vd~s~ltGes~pv~k~~~-------------------------------------------~~~~~~~i~~Gs~v~-~ 113 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL-------------------------------------------PLNPGNIIFAGSIVV-S 113 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS-------------------------------------------CCCTTTEE-TTEEEE-E
T ss_pred cccccccccccccccccccc-------------------------------------------cccccchhhcccccc-c
Confidence 99999999999999999863 455678999999999 7
Q ss_pred cEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchh
Q psy15803 268 AWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSF 344 (1045)
Q Consensus 268 ~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 344 (1045)
+|++++|++||.+|+++++.+ ..+.+++++++.++++..+++++.++++++++++++++ . ...++
T Consensus 114 g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~ 181 (230)
T PF00122_consen 114 GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN---D---------SGISF 181 (230)
T ss_dssp EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG---S---------TTCHC
T ss_pred cccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec---c---------ccccc
Confidence 789999999999999888776 55667799999999999999999988888877665543 1 12345
Q ss_pred hhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhh
Q psy15803 345 HSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEE 403 (1045)
Q Consensus 345 ~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~ 403 (1045)
...+..++.+++.+||++|+++++++...++.++ .++++++|+++.+|.
T Consensus 182 ~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 182 FKSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp CHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ccccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 5689999999999999999999999999999999 778999999999984
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=312.90 Aligned_cols=228 Identities=20% Similarity=0.243 Sum_probs=168.8
Q ss_pred hhhhhhhhccccccccccccccc-cccCCChhHHHHHHHHHHcCeEEec---------ccc-ceeee---ecccccceeE
Q psy15803 804 VREFLTMLAVCHTVIPEMKDGVL-QYHASSPDEKALILGAKAFGYVFTS---------KHY-KEIEI---TALGETQRYV 869 (1045)
Q Consensus 804 ~~~~l~~~slc~~a~~~~~~~~~-~~~~g~p~e~all~~a~~~g~~~~~---------~~~-~~~~~---~~~~~~~~~~ 869 (1045)
++.++...++||++....++... ....|||+|.||+++|.+.|+.... .+. ....+ ...+....|+
T Consensus 447 ~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (1053)
T TIGR01523 447 FIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFE 526 (1053)
T ss_pred HHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccc
Confidence 34566777889987654321111 1235899999999999988864210 000 00000 0112245789
Q ss_pred EEEeeccccccceEEEEEEcCCC-cEEEEEeCCcHHHHHHhcc------------CchhHHHHHHHHHHHHHhcCeEEEE
Q psy15803 870 ILNVLEFTSDRKRMSVIVRTPQN-EIKVFCKGADNMILSRLDS------------HSKYVDETKTHLEQFASSGYRTLCF 936 (1045)
Q Consensus 870 il~~~~F~s~~k~msvvv~~~~~-~~~~~~KGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~rvl~~ 936 (1045)
+++++||||+|||||++++++++ ++++|+|||||.|+++|+. +++.++++.+..++|+++|+|||++
T Consensus 527 ~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~ 606 (1053)
T TIGR01523 527 FIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAF 606 (1053)
T ss_pred eEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 99999999999999999997644 4889999999999999963 1234567888899999999999999
Q ss_pred EEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCH
Q psy15803 937 GVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKK 1016 (1045)
Q Consensus 937 a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~ 1016 (1045)
|||.++.+++..+. +.+ . ...++.+|+||+|+|+++|+||||++++++|++||+|||+|||+||||+
T Consensus 607 A~r~l~~~~~~~~~--~~~---~--------~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~ 673 (1053)
T TIGR01523 607 ASKSFDKADNNDDQ--LKN---E--------TLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFP 673 (1053)
T ss_pred EEEECCchhccchh--hhc---c--------ccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCH
Confidence 99999765432110 000 0 0012457899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCccCCCC--------CeEeecCCCCC
Q psy15803 1017 ETAINIGYSSRLVGQDT--------PLLDLDGYSLD 1044 (1045)
Q Consensus 1017 ~tA~~ia~~~gi~~~~~--------~~~~i~g~~l~ 1044 (1045)
.||.+||+++||++++. .-.+++|.+++
T Consensus 674 ~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~ 709 (1053)
T TIGR01523 674 ETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD 709 (1053)
T ss_pred HHHHHHHHHcCCCCccccccccccccceeeehHHhh
Confidence 99999999999986521 12588998775
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=308.96 Aligned_cols=204 Identities=24% Similarity=0.354 Sum_probs=159.2
Q ss_pred hhhhhccccccccccccccccccCCChhHHHHHHHHHHcCeEEecccccee------eeecccccceeEEEEeecccccc
Q psy15803 807 FLTMLAVCHTVIPEMKDGVLQYHASSPDEKALILGAKAFGYVFTSKHYKEI------EITALGETQRYVILNVLEFTSDR 880 (1045)
Q Consensus 807 ~l~~~slc~~a~~~~~~~~~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~------~~~~~~~~~~~~il~~~~F~s~~ 880 (1045)
+....+.||+...... ...|||+|.|+++++ |+.+........ .+...+....|++++++||+|++
T Consensus 493 ~~~~~a~C~~~~~~~~-----~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~ 564 (1054)
T TIGR01657 493 THKALATCHSLTKLEG-----KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSAL 564 (1054)
T ss_pred HHHHHHhCCeeEEECC-----EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCC
Confidence 4456678988754321 235899999999875 554433111000 00011223589999999999999
Q ss_pred ceEEEEEEcCC-CcEEEEEeCCcHHHHHHhccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhc
Q psy15803 881 KRMSVIVRTPQ-NEIKVFCKGADNMILSRLDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATS 959 (1045)
Q Consensus 881 k~msvvv~~~~-~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~ 959 (1045)
|||||++++++ +++++|+|||||.|+++|+.. ..++++.+.+++|+++|+||||+|||.+++.+..++.
T Consensus 565 krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~--------- 634 (1054)
T TIGR01657 565 QRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQ--------- 634 (1054)
T ss_pred CEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhh---------
Confidence 99999999764 567899999999999999853 3567889999999999999999999999754322211
Q ss_pred ccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeE
Q psy15803 960 MTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLL 1036 (1045)
Q Consensus 960 ~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~ 1036 (1045)
+..++++|+||+|+|+++|+||+|++++++|++||+|||+++|+||||+.||.+||++|||++++.+++
T Consensus 635 --------~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi 703 (1054)
T TIGR01657 635 --------DLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLI 703 (1054)
T ss_pred --------hccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEE
Confidence 112367899999999999999999999999999999999999999999999999999999998765433
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-28 Score=302.38 Aligned_cols=225 Identities=25% Similarity=0.377 Sum_probs=171.7
Q ss_pred hhhhhhhhccccccccccccccccc-cCCChhHHHHHHHHHHcCeEEeccccceeeeeccc----ccceeEEEEeecccc
Q psy15803 804 VREFLTMLAVCHTVIPEMKDGVLQY-HASSPDEKALILGAKAFGYVFTSKHYKEIEITALG----ETQRYVILNVLEFTS 878 (1045)
Q Consensus 804 ~~~~l~~~slc~~a~~~~~~~~~~~-~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~----~~~~~~il~~~~F~s 878 (1045)
...++.+.++||++.....+....+ ..|||+|.||++++.+.|+....+..+.+.....+ .++.|++++++||||
T Consensus 351 ~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s 430 (917)
T TIGR01116 351 LEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSR 430 (917)
T ss_pred HHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccCh
Confidence 3456667788998765432222122 24899999999999998876554433322222111 245788999999999
Q ss_pred ccceEEEEEEcCCCcEEEEEeCCcHHHHHHhcc-----------CchhHHHHHHHHHHHHH-hcCeEEEEEEEecChhHH
Q psy15803 879 DRKRMSVIVRTPQNEIKVFCKGADNMILSRLDS-----------HSKYVDETKTHLEQFAS-SGYRTLCFGVAKIPEEKY 946 (1045)
Q Consensus 879 ~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~~-----------~~~~~~~~~~~~~~~~~-~G~rvl~~a~k~l~~~~~ 946 (1045)
+||||||++++ ++++++|+|||||.|+++|+. +++.++++.+++++|++ +|+|||++|||.++.++.
T Consensus 431 ~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~ 509 (917)
T TIGR01116 431 DRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPRE 509 (917)
T ss_pred hhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccc
Confidence 99999999985 466899999999999999963 12345678888999999 999999999999875432
Q ss_pred HhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Q psy15803 947 KNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSS 1026 (1045)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~ 1026 (1045)
.. . ..+ ...++.+|+||+|+|+++++||||++++++|++||+|||++||+|||++.||.++|+++
T Consensus 510 ~~-~---------~~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~ 574 (917)
T TIGR01116 510 ED-L---------LSD-----PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI 574 (917)
T ss_pred cc-c---------ccc-----chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc
Confidence 10 0 000 11235678999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCe--EeecCCCCC
Q psy15803 1027 RLVGQDTPL--LDLDGYSLD 1044 (1045)
Q Consensus 1027 gi~~~~~~~--~~i~g~~l~ 1044 (1045)
||..++.++ ..++|.+++
T Consensus 575 gi~~~~~~v~~~~~~g~~l~ 594 (917)
T TIGR01116 575 GIFSPDEDVTFKSFTGREFD 594 (917)
T ss_pred CCCCCCccccceeeeHHHHh
Confidence 999766532 367776654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=294.11 Aligned_cols=200 Identities=19% Similarity=0.238 Sum_probs=156.2
Q ss_pred hhhhhhcccccccccccccc----ccccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccc
Q psy15803 806 EFLTMLAVCHTVIPEMKDGV----LQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRK 881 (1045)
Q Consensus 806 ~~l~~~slc~~a~~~~~~~~----~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k 881 (1045)
.++...++||++.+..++.. ..+..|||+|.||++++.+.+. +..+.+..|++++.+||||+||
T Consensus 394 ~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~------------~~~~~~~~~~~v~~~pF~s~rK 461 (997)
T TIGR01106 394 ALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLG------------SVMEMRERNPKVVEIPFNSTNK 461 (997)
T ss_pred HHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCC------------CHHHHHhhCceeEEeccCCCCc
Confidence 45567788988765432211 1245689999999999986441 1223446788999999999999
Q ss_pred eEEEEEEcC---CCcEEEEEeCCcHHHHHHhcc----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHh
Q psy15803 882 RMSVIVRTP---QNEIKVFCKGADNMILSRLDS----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKN 948 (1045)
Q Consensus 882 ~msvvv~~~---~~~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~ 948 (1045)
||+++++.. ++++++|+|||||.|+++|+. +++.++.+.+..++|+++|+|||++|||.++.+++..
T Consensus 462 ~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~ 541 (997)
T TIGR01106 462 YQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPE 541 (997)
T ss_pred eEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccc
Confidence 999998643 246889999999999999963 2234667888899999999999999999997654321
Q ss_pred -HHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Q psy15803 949 -WSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSR 1027 (1045)
Q Consensus 949 -~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~g 1027 (1045)
|.. +.+ ..+..|+||+|+|+++++||||++++++|++|+++||+|+|+|||++.||.++|+++|
T Consensus 542 ~~~~----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 542 GFQF----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred cccc----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 100 000 0123489999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC
Q psy15803 1028 LVGQD 1032 (1045)
Q Consensus 1028 i~~~~ 1032 (1045)
|++++
T Consensus 607 i~~~~ 611 (997)
T TIGR01106 607 IISEG 611 (997)
T ss_pred CCCCC
Confidence 98654
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.9e-27 Score=293.96 Aligned_cols=181 Identities=25% Similarity=0.348 Sum_probs=152.1
Q ss_pred ccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHH
Q psy15803 828 YHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILS 907 (1045)
Q Consensus 828 ~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~ 907 (1045)
...|||+|.|+++++.+.|.. ....+..|++++.+||+|+||||+++++.+++++++++|||||.|++
T Consensus 442 ~~~g~p~e~All~~~~~~~~~------------~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~ 509 (941)
T TIGR01517 442 AFIGSKTECALLGFLLLLGRD------------YQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLK 509 (941)
T ss_pred ccCCCccHHHHHHHHHHcCCC------------HHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHH
Confidence 456899999999999876631 11223457888999999999999999997777799999999999999
Q ss_pred HhccC----------chhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccC
Q psy15803 908 RLDSH----------SKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETK 977 (1045)
Q Consensus 908 ~~~~~----------~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 977 (1045)
.|+.. .+.++++.+.++.|+++|+||+++|||.++.+++..| +..|++
T Consensus 510 ~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~ 567 (941)
T TIGR01517 510 PCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNGG 567 (941)
T ss_pred hhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc----------------------cccccC
Confidence 99631 0134667888899999999999999999876543221 234789
Q ss_pred eEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEeecCCCCC
Q psy15803 978 LHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLDLDGYSLD 1044 (1045)
Q Consensus 978 l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~i~g~~l~ 1044 (1045)
|+|+|+++|+||||++++++|++||++||+++|+||||+.||.+||++|||.+++. .+++|++++
T Consensus 568 l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~--~vi~G~~~~ 632 (941)
T TIGR01517 568 LTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--LAMEGKEFR 632 (941)
T ss_pred cEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--eEeeHHHhh
Confidence 99999999999999999999999999999999999999999999999999997665 478888765
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=272.47 Aligned_cols=177 Identities=23% Similarity=0.265 Sum_probs=146.3
Q ss_pred CCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHh
Q psy15803 830 ASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRL 909 (1045)
Q Consensus 830 ~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~ 909 (1045)
.++|+|.|+++++.+.|.. .....|+.++++||++.||+|++++++.++++++++|||||.|+++|
T Consensus 415 ~~~p~e~All~~a~~~~~~--------------~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c 480 (903)
T PRK15122 415 MKNLMDQAVVAFAEGNPEI--------------VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVA 480 (903)
T ss_pred CCChHHHHHHHHHHHcCch--------------hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhc
Confidence 4799999999999876521 11235778899999999999999998777788999999999999999
Q ss_pred cc----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeE
Q psy15803 910 DS----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLH 979 (1045)
Q Consensus 910 ~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~ 979 (1045)
+. +++.++++.+..+.++++|+||+++|||.++.++..+. ..+..|+|++
T Consensus 481 ~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~ 540 (903)
T PRK15122 481 THVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLV 540 (903)
T ss_pred hhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccc--------------------cccccccCcE
Confidence 63 12234567778899999999999999999865432110 0123578999
Q ss_pred EEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEeecCCCCC
Q psy15803 980 LLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLDLDGYSLD 1044 (1045)
Q Consensus 980 ~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~i~g~~l~ 1044 (1045)
|+|+++|+||||++++++|++||++||+|+|+||||+.||.+||+++||..+ .+++|.+++
T Consensus 541 ~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~----~vi~G~el~ 601 (903)
T PRK15122 541 IRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG----EPLLGTEIE 601 (903)
T ss_pred EEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC----CccchHhhh
Confidence 9999999999999999999999999999999999999999999999999532 278898876
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-24 Score=266.20 Aligned_cols=175 Identities=22% Similarity=0.293 Sum_probs=143.3
Q ss_pred CCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHh
Q psy15803 830 ASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRL 909 (1045)
Q Consensus 830 ~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~ 909 (1045)
.+||+|.|++.++...+ .......|+.++++||||++|||++++++.++.+++++|||||.|+++|
T Consensus 417 ~~~p~d~All~~a~~~~--------------~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c 482 (902)
T PRK10517 417 LKNLLDTAVLEGVDEES--------------ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVC 482 (902)
T ss_pred CCCHHHHHHHHHHHhcc--------------hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhc
Confidence 37999999999886532 0112346778899999999999999998777778899999999999999
Q ss_pred cc----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeE
Q psy15803 910 DS----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLH 979 (1045)
Q Consensus 910 ~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~ 979 (1045)
+. +++.++++.+..+.++++|+||+++|||.++.++. ++. ...|+|++
T Consensus 483 ~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~-~~~---------------------~~~e~~l~ 540 (902)
T PRK10517 483 SQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG-DYQ---------------------RADESDLI 540 (902)
T ss_pred hhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc-ccc---------------------cccccCce
Confidence 63 12334567777889999999999999998865421 110 12368999
Q ss_pred EEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEeecCCCCC
Q psy15803 980 LLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLDLDGYSLD 1044 (1045)
Q Consensus 980 ~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~i~g~~l~ 1044 (1045)
|+|+++|+||||++++++|++||++||+|+|+||||+.||.+||+++||..+ .+++|.+++
T Consensus 541 ~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~----~v~~G~el~ 601 (902)
T PRK10517 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLIGSDIE 601 (902)
T ss_pred eeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc----CceeHHHHH
Confidence 9999999999999999999999999999999999999999999999999432 278888775
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=263.16 Aligned_cols=187 Identities=24% Similarity=0.342 Sum_probs=153.0
Q ss_pred hhhhhhccccccccccccccccccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEE
Q psy15803 806 EFLTMLAVCHTVIPEMKDGVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSV 885 (1045)
Q Consensus 806 ~~l~~~slc~~a~~~~~~~~~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msv 885 (1045)
.++...++|+++.....+. ...|||+|.|+++++.+.|+. ..+..|+.++++||+|+||||++
T Consensus 383 ~~l~~~~l~~~~~~~~~~~---~~~g~p~e~All~~~~~~~~~--------------~~~~~~~~~~~~pF~s~~k~m~v 445 (884)
T TIGR01522 383 RILEAGNLCNNAKFRNEAD---TLLGNPTDVALIELLMKFGLD--------------DLRETYIRVAEVPFSSERKWMAV 445 (884)
T ss_pred HHHHHHhhhCCCeecCCCC---CcCCChHHHHHHHHHHHcCcH--------------hHHhhCcEEeEeCCCCCCCeEEE
Confidence 4556667788775432221 124799999999999887632 12235788899999999999999
Q ss_pred EEEcC-CCcEEEEEeCCcHHHHHHhcc-----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHH
Q psy15803 886 IVRTP-QNEIKVFCKGADNMILSRLDS-----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALY 953 (1045)
Q Consensus 886 vv~~~-~~~~~~~~KGa~e~i~~~~~~-----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~ 953 (1045)
++++. ++++++|+|||||.|+..|+. +++.++++.+..++++++|+||+++|||.+
T Consensus 446 ~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~------------ 513 (884)
T TIGR01522 446 KCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE------------ 513 (884)
T ss_pred EEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC------------
Confidence 99864 567899999999999999963 122345677888999999999999999865
Q ss_pred HHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCC
Q psy15803 954 KNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDT 1033 (1045)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~ 1033 (1045)
+++|+|+|+++++||||++++++|++||++||+++|+|||++.||.+||+++||.....
T Consensus 514 ---------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~ 572 (884)
T TIGR01522 514 ---------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTS 572 (884)
T ss_pred ---------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC
Confidence 25799999999999999999999999999999999999999999999999999987655
Q ss_pred CeEeecCCCCC
Q psy15803 1034 PLLDLDGYSLD 1044 (1045)
Q Consensus 1034 ~~~~i~g~~l~ 1044 (1045)
. +++|++++
T Consensus 573 ~--~v~g~~l~ 581 (884)
T TIGR01522 573 Q--SVSGEKLD 581 (884)
T ss_pred c--eeEhHHhH
Confidence 3 57787764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=262.34 Aligned_cols=174 Identities=22% Similarity=0.290 Sum_probs=143.3
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
++|+|.|+++++...+. ......|+.++.+||||+||+|++++++.++.+++++|||||.|+++|+
T Consensus 383 ~~p~~~Al~~~~~~~~~--------------~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~ 448 (867)
T TIGR01524 383 KNVLDHAVLAKLDESAA--------------RQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCT 448 (867)
T ss_pred CChHHHHHHHHHHhhch--------------hhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhch
Confidence 59999999998875321 1123467788999999999999999987666688999999999999996
Q ss_pred c----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEE
Q psy15803 911 S----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHL 980 (1045)
Q Consensus 911 ~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 980 (1045)
. +++.++++.+..+.++++|+||+++|||.++.++. ++ .+..|++|+|
T Consensus 449 ~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~-~~---------------------~~~~e~~l~~ 506 (867)
T TIGR01524 449 HKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA-DF---------------------TKTDEEQLII 506 (867)
T ss_pred hhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc-cc---------------------cccccCCcEE
Confidence 3 12335677888899999999999999999875431 00 0123689999
Q ss_pred EEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCCeEeecCCCCC
Q psy15803 981 LGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLDLDGYSLD 1044 (1045)
Q Consensus 981 lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~~~~i~g~~l~ 1044 (1045)
+|+++|+||||++++++|++||++||+|+|+||||+.||.+||+++||.+++ +++|.+++
T Consensus 507 lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~----v~~g~~l~ 566 (867)
T TIGR01524 507 EGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND----FLLGADIE 566 (867)
T ss_pred EEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC----eeecHhhh
Confidence 9999999999999999999999999999999999999999999999996432 67887765
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-23 Score=237.89 Aligned_cols=242 Identities=19% Similarity=0.200 Sum_probs=184.0
Q ss_pred cccccCCccccceeeeEEEEEEeeeeee-eeecCCCcchhhhhhhhhccccccccccccccc----cccCCChhHHHHHH
Q psy15803 766 GTIWANGKDGGYLVLGNIVYTVTEQSRM-IARNPSIEPVVREFLTMLAVCHTVIPEMKDGVL----QYHASSPDEKALIL 840 (1045)
Q Consensus 766 ~~~~~ng~~~d~~~~g~~v~tV~~k~~~-~~~~~s~~~~~~~~l~~~slc~~a~~~~~~~~~----~~~~g~p~e~all~ 840 (1045)
+.++.|.+++.|.|+++.+......... -..+.....-+..+..+..+||.+.....+... ....||+.|.||++
T Consensus 375 GTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk 454 (1019)
T KOG0203|consen 375 GTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLK 454 (1019)
T ss_pred eeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHH
Confidence 5788999999999998776653321111 001111233344677788889988765433322 22449999999999
Q ss_pred HHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCC---CcEEEEEeCCcHHHHHHhcc------
Q psy15803 841 GAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQ---NEIKVFCKGADNMILSRLDS------ 911 (1045)
Q Consensus 841 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~---~~~~~~~KGa~e~i~~~~~~------ 911 (1045)
++.-.- -+....++.++.+.++||+|.+|+.-.+++..+ .++.+.+|||||.++++|+.
T Consensus 455 ~~e~~~------------~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~ 522 (1019)
T KOG0203|consen 455 FIELIL------------GSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGE 522 (1019)
T ss_pred HHHHhc------------chHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCC
Confidence 998532 122445678888999999999999999998754 46889999999999999974
Q ss_pred ----CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEec
Q psy15803 912 ----HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVE 987 (1045)
Q Consensus 912 ----~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 987 (1045)
+++..+.+++.+.++...|.||+++|++.++++++.......-+ ..+..-.++.|+|++++.
T Consensus 523 e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d--------------~~n~p~~nl~FlGl~s~i 588 (1019)
T KOG0203|consen 523 EKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTD--------------DVNFPTDNLRFLGLISMI 588 (1019)
T ss_pred CCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecC--------------CCCCcchhccccchhhcc
Confidence 34566788889999999999999999999998765432211000 012234689999999999
Q ss_pred CccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCC
Q psy15803 988 DKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDT 1033 (1045)
Q Consensus 988 d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~ 1033 (1045)
||||..+|+++..||.|||||+|+||||+.||.+||++.||++++.
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~ 634 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGS 634 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCc
Confidence 9999999999999999999999999999999999999999987643
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-21 Score=240.36 Aligned_cols=151 Identities=24% Similarity=0.307 Sum_probs=132.9
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCC-CcEEEEEeCCcHHHHHHh
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQ-NEIKVFCKGADNMILSRL 909 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~-~~~~~~~KGa~e~i~~~~ 909 (1045)
++|+|.|+++++.+.+ .....|++++.+||++.+|+|++++++++ ++.++++|||||.|+++|
T Consensus 332 ~~pi~~Ai~~~~~~~~----------------~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c 395 (755)
T TIGR01647 332 QDAIDTAVLGSAKDLK----------------EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLC 395 (755)
T ss_pred CChHHHHHHHHHHHhH----------------HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhc
Confidence 6999999999887533 11235778899999999999999998764 677889999999999999
Q ss_pred ccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCc
Q psy15803 910 DSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDK 989 (1045)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 989 (1045)
+...+.++++.+.+++++++|+|++++|||. .|++|+|+|+++|+||
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~---------------------------------~e~~l~~~Gli~l~Dp 442 (755)
T TIGR01647 396 DNKKEIEEKVEEKVDELASRGYRALGVARTD---------------------------------EEGRWHFLGLLPLFDP 442 (755)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc---------------------------------CCCCcEEEEEeeccCC
Confidence 8655566788888999999999999999872 1378999999999999
Q ss_pred cCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccC
Q psy15803 990 LQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVG 1030 (1045)
Q Consensus 990 lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~ 1030 (1045)
||++++++|++||++||+|+|+||||+.||.+||+++||.+
T Consensus 443 ~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 443 PRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT 483 (755)
T ss_pred ChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999975
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.7e-19 Score=203.46 Aligned_cols=162 Identities=19% Similarity=0.218 Sum_probs=125.6
Q ss_pred ceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhcccccccc
Q psy15803 542 YALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGIS 621 (1045)
Q Consensus 542 ~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~ 621 (1045)
+.+.++|+.++.+. +...+.+.++..+|. |||||+|.||+++|+.+|+. |..|+|+|||+||+.|||+|||||+.+
T Consensus 803 yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLS 878 (1140)
T KOG0208|consen 803 YHLAMSGKTFQVIL-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLS 878 (1140)
T ss_pred eEEEecCchhHHHH-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchh
Confidence 56889999999887 445556666665555 99999999999999999999 999999999999999999999999998
Q ss_pred CchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHH-HHHHHHHHHHHhCCCcchhhhhHHHHHHHH
Q psy15803 622 GVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNIC-LYVMELWFAIYSGWSGQVLFERWTIGLYNV 700 (1045)
Q Consensus 622 g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~-~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~ 700 (1045)
-.|+..||. ..-..++.+.+..+| .+||......-...+|+..+.++ ++.+.++|..- .-+...|.+.+.+
T Consensus 879 eaEASvAAp-FTSk~~~I~cVp~vI-rEGRaALVTSf~~FkYMalYs~iqFisv~~LY~~~------~nl~D~Qfl~iDL 950 (1140)
T KOG0208|consen 879 EAEASVAAP-FTSKTPSISCVPDVI-REGRAALVTSFACFKYMALYSAIQFISVVFLYLIN------SNLGDLQFLFIDL 950 (1140)
T ss_pred hhhHhhcCc-cccCCCchhhHhHHH-hhhhhhhhhhHHHHHHHHHHHHHHHHhhheeeeec------ccccchhhhhhHH
Confidence 888766553 222335889999999 89999999888888887555543 33334444333 3356778888888
Q ss_pred Hhhhhhhhhhhcccc
Q psy15803 701 LFTAFPPLAIGILDQ 715 (1045)
Q Consensus 701 ~~t~~p~~~~~~~~~ 715 (1045)
+....-+++++.++.
T Consensus 951 lii~pia~~m~~~~a 965 (1140)
T KOG0208|consen 951 LIITPIAVMMSRFDA 965 (1140)
T ss_pred HHHHHHHHHHccCcH
Confidence 877777777776554
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.6e-17 Score=193.63 Aligned_cols=139 Identities=17% Similarity=0.212 Sum_probs=114.0
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
.+|++.|+++++++.|+... ....+.+||++++|+|++.++ ++ .+.||||+.++++|+
T Consensus 342 ~~P~~~AIv~~a~~~~~~~~-----------------~~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~ 399 (673)
T PRK14010 342 DTPEGRSIVKLAYKQHIDLP-----------------QEVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVK 399 (673)
T ss_pred CChHHHHHHHHHHHcCCCch-----------------hhhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhh
Confidence 38999999999987653210 011234799999999999763 32 455999999999997
Q ss_pred cC-chhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCc
Q psy15803 911 SH-SKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDK 989 (1045)
Q Consensus 911 ~~-~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 989 (1045)
.. ...+.++.+..++++++|+|+++++ .|++++|+++++||
T Consensus 400 ~~g~~~~~~~~~~~~~~a~~G~~~l~v~--------------------------------------~~~~~lG~i~l~Dp 441 (673)
T PRK14010 400 EAGGHIPVDLDALVKGVSKKGGTPLVVL--------------------------------------EDNEILGVIYLKDV 441 (673)
T ss_pred hcCCCCchHHHHHHHHHHhCCCeEEEEE--------------------------------------ECCEEEEEEEeecC
Confidence 42 1223456677788999999999876 36789999999999
Q ss_pred cCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 990 LQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 990 lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+|+|++++|++||++||+++|+||||+.||.+||+++||.
T Consensus 442 ~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~ 481 (673)
T PRK14010 442 IKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD 481 (673)
T ss_pred CcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999999994
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.8e-17 Score=193.11 Aligned_cols=141 Identities=21% Similarity=0.296 Sum_probs=117.0
Q ss_pred ChhHHHHHHHHHH-cCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 832 SPDEKALILGAKA-FGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 832 ~p~e~all~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
.|...|+++++++ .++. .....++..+.+||++.+|+|++.+. + ..|.|||+|.+++.|+
T Consensus 343 hP~~~AIv~~a~~~~~~~--------------~~~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~ 403 (679)
T PRK01122 343 TPEGRSIVVLAKQRFNLR--------------ERDLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVE 403 (679)
T ss_pred CchHHHHHHHHHhhcCCC--------------chhhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHH
Confidence 4777899999876 3321 01112456778999999998888653 3 4789999999999996
Q ss_pred cC-chhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCc
Q psy15803 911 SH-SKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDK 989 (1045)
Q Consensus 911 ~~-~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 989 (1045)
.. ...++++.+..++++++|.|++++| .|++++|+++++||
T Consensus 404 ~~g~~~~~~~~~~~~~~a~~G~~~l~va--------------------------------------~~~~~lG~i~l~D~ 445 (679)
T PRK01122 404 SNGGHFPAELDAAVDEVARKGGTPLVVA--------------------------------------EDNRVLGVIYLKDI 445 (679)
T ss_pred hcCCcChHHHHHHHHHHHhCCCcEEEEE--------------------------------------ECCeEEEEEEEecc
Confidence 42 2335677888899999999999999 35789999999999
Q ss_pred cCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 990 LQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 990 lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+|+|++++|++||++||+++|+||||+.||.+||+++||-
T Consensus 446 ~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId 485 (679)
T PRK01122 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 485 (679)
T ss_pred CchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999999994
|
|
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-16 Score=178.44 Aligned_cols=149 Identities=20% Similarity=0.264 Sum_probs=136.5
Q ss_pred cccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhccCchhHHHHHHHHHHHHHhcCeEEEEEEEe
Q psy15803 861 ALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLDSHSKYVDETKTHLEQFASSGYRTLCFGVAK 940 (1045)
Q Consensus 861 ~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~ 940 (1045)
+.+.+..|+.++-+|||+..||.+..+.+++|+.+..+|||||-|++.|+...+.++++.+.++.|+++|+|.|++|++.
T Consensus 389 PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~ 468 (942)
T KOG0205|consen 389 PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQE 468 (942)
T ss_pred HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhc
Confidence 35567899999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred cChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHH
Q psy15803 941 IPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAI 1020 (1045)
Q Consensus 941 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~ 1020 (1045)
.+++.. +.....+.|+|+..+-||||+++.++|......|++|.|+|||....|.
T Consensus 469 v~e~~~-------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~k 523 (942)
T KOG0205|consen 469 VPEKTK-------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK 523 (942)
T ss_pred cccccc-------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHH
Confidence 887631 3335679999999999999999999999999999999999999999999
Q ss_pred HHHHHcCccCCCCC
Q psy15803 1021 NIGYSSRLVGQDTP 1034 (1045)
Q Consensus 1021 ~ia~~~gi~~~~~~ 1034 (1045)
..+|++|+-.+-.+
T Consensus 524 eTgrrlgmgtnmyp 537 (942)
T KOG0205|consen 524 ETGRRLGMGTNMYP 537 (942)
T ss_pred hhhhhhccccCcCC
Confidence 99999999876544
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-15 Score=180.33 Aligned_cols=143 Identities=20% Similarity=0.294 Sum_probs=117.5
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
..|.+.|++++|++.|.... ...++..+..||++.+|+|++.+. ++ ..+.||+||.+++.|+
T Consensus 343 ~hP~a~Aiv~~a~~~~~~~~--------------~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~ 404 (675)
T TIGR01497 343 DTPEGKSIVILAKQLGIRED--------------DVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVE 404 (675)
T ss_pred CCcHHHHHHHHHHHcCCCcc--------------ccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHH
Confidence 36889999999987663211 012345678999999888877554 33 4789999999999885
Q ss_pred cC-chhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCc
Q psy15803 911 SH-SKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDK 989 (1045)
Q Consensus 911 ~~-~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 989 (1045)
.. ...+.++.+.+++++++|.|++++|+ +.+++|+++++||
T Consensus 405 ~~g~~~~~~~~~~~~~~a~~G~r~l~va~--------------------------------------~~~~lG~i~l~D~ 446 (675)
T TIGR01497 405 ANGGHIPTDLDQAVDQVARQGGTPLVVCE--------------------------------------DNRIYGVIYLKDI 446 (675)
T ss_pred hcCCCCcHHHHHHHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEeccc
Confidence 42 23346678888999999999999992 4589999999999
Q ss_pred cCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 990 LQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 990 lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+|++++++|++||++||+++|+|||+..||.++|+++||-
T Consensus 447 ~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~ 486 (675)
T TIGR01497 447 VKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD 486 (675)
T ss_pred chhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999994
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.9e-15 Score=132.59 Aligned_cols=89 Identities=35% Similarity=0.474 Sum_probs=69.9
Q ss_pred cccccccccccccccc-ccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcC
Q psy15803 812 AVCHTVIPEMKDGVLQ-YHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTP 890 (1045)
Q Consensus 812 slc~~a~~~~~~~~~~-~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~ 890 (1045)
++||++.....+.... ...|||+|.||++++.+.|.. .+....+..|++++++||||+||||+|+++ .
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~----------~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~ 69 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVG----------IDIKEIRSKYKIVAEIPFDSERKRMSVVVR-N 69 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCC----------CcHHHHHhhcceeEEEccCcccceeEEEEe-C
Confidence 4688877654433222 266899999999999998643 234456789999999999999999999998 3
Q ss_pred CCcEEEEEeCCcHHHHHHhcc
Q psy15803 891 QNEIKVFCKGADNMILSRLDS 911 (1045)
Q Consensus 891 ~~~~~~~~KGa~e~i~~~~~~ 911 (1045)
++.+++|+|||||.|+++|+.
T Consensus 70 ~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 70 DGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred CCEEEEEcCCChHHHHHhcCC
Confidence 345777999999999999973
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.46 E-value=3e-14 Score=150.87 Aligned_cols=96 Identities=18% Similarity=0.202 Sum_probs=69.1
Q ss_pred eEEEEecCCCCchhHHHHHHHHHHHHHhhhhhhHHHHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEE
Q psy15803 495 SRMIARNPSIEPVVREFLTMLAVCHTVYIELKHRTALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVI 574 (1045)
Q Consensus 495 ~svi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv 574 (1045)
+..+......+++++++..++..++++|+++. +++|+....... +.+..-..+..+
T Consensus 116 ~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~------------------i~TGD~~~~a~~------~~~~lgi~~~~v 171 (215)
T PF00702_consen 116 LIFLGLFGLRDPLRPGAKEALQELKEAGIKVA------------------ILTGDNESTASA------IAKQLGIFDSIV 171 (215)
T ss_dssp HEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEE------------------EEESSEHHHHHH------HHHHTTSCSEEE
T ss_pred CeEEEEEeecCcchhhhhhhhhhhhccCccee------------------eeeccccccccc------cccccccccccc
Confidence 34555555677889999999999999887633 344443322211 001011123569
Q ss_pred EEec--CcccH--HHHHHHHHhcCCCEEEEecCCccChHHHHhcc
Q psy15803 575 CCRV--SPLQK--AEVVELVTVNTNSVTLAIGDGANDVAMIQKAH 615 (1045)
Q Consensus 575 ~~r~--sP~qK--~~iV~~lq~~~g~~v~~iGDG~ND~~al~~Ad 615 (1045)
++++ +|++| .++++.+|.. ++.|+|||||.||++|+++||
T Consensus 172 ~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 172 FARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 9999 99999 9999999966 569999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=99.46 E-value=8e-13 Score=157.73 Aligned_cols=129 Identities=42% Similarity=0.554 Sum_probs=109.4
Q ss_pred cCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHH
Q psy15803 829 HASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSR 908 (1045)
Q Consensus 829 ~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~ 908 (1045)
..++|.|.|++++++..+ +...||++.+|+|+++++.+++ .|+||+++.+++.
T Consensus 259 ~s~hp~~~ai~~~~~~~~------------------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~ 311 (499)
T TIGR01494 259 LSGHPDERALVKSAKWKI------------------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSR 311 (499)
T ss_pred CCCChHHHHHHHHhhhcC------------------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHh
Confidence 457999999999886411 2467999999999999986333 4789999999988
Q ss_pred hccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecC
Q psy15803 909 LDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVED 988 (1045)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d 988 (1045)
|.. +.+..+.++.+|+|++++|++ -+++|+++++|
T Consensus 312 ~~~-------~~~~~~~~~~~g~~~~~~a~~--------------------------------------~~~~g~i~l~d 346 (499)
T TIGR01494 312 VKD-------LEEKVKELAQSGLRVLAVASK--------------------------------------ETLLGLLGLED 346 (499)
T ss_pred hHH-------HHHHHHHHHhCCCEEEEEEEC--------------------------------------CeEEEEEEecC
Confidence 742 334455688999999999953 26899999999
Q ss_pred ccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 989 KLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 989 ~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
++|++++++|+.|+++|++++|+|||++.||..+|+++||.
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi~ 387 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGIF 387 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCce
Confidence 99999999999999999999999999999999999999983
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=9e-11 Score=128.86 Aligned_cols=143 Identities=19% Similarity=0.244 Sum_probs=115.8
Q ss_pred ChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhcc
Q psy15803 832 SPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLDS 911 (1045)
Q Consensus 832 ~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~~ 911 (1045)
.|.-..++++|++.++.+..+ +... .-.-.||+.+.|+..+-.. ++ +-+-|||.+.+......
T Consensus 344 TpEGrSIV~LA~~~~~~~~~~----------~~~~---~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~ 406 (681)
T COG2216 344 TPEGRSIVELAKKLGIELRED----------DLQS---HAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRE 406 (681)
T ss_pred CCCcccHHHHHHHhccCCCcc----------cccc---cceeeecceecccccccCC--CC--ceeecccHHHHHHHHHh
Confidence 466667888888877432221 1111 1246799999887777554 33 46779999999998864
Q ss_pred Cc-hhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCcc
Q psy15803 912 HS-KYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKL 990 (1045)
Q Consensus 912 ~~-~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l 990 (1045)
.. +.+.+++...++.++.|=..|+++ .|-.++|++.++|-+
T Consensus 407 ~~g~~p~~l~~~~~~vs~~GGTPL~V~--------------------------------------~~~~~~GVI~LkDiv 448 (681)
T COG2216 407 RGGHIPEDLDAAVDEVSRLGGTPLVVV--------------------------------------ENGRILGVIYLKDIV 448 (681)
T ss_pred cCCCCCHHHHHHHHHHHhcCCCceEEE--------------------------------------ECCEEEEEEEehhhc
Confidence 33 467889999999999999999998 467899999999999
Q ss_pred CccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 991 QEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 991 r~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
|+|.+|-++++|+.|||.+|+||||+.||..||.+.|+=
T Consensus 449 K~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 449 KPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred chhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 999999999999999999999999999999999999974
|
|
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.1e-11 Score=140.02 Aligned_cols=111 Identities=28% Similarity=0.360 Sum_probs=86.8
Q ss_pred chhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCC--------------------------------------
Q psy15803 506 PVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTN-------------------------------------- 539 (1045)
Q Consensus 506 ~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~-------------------------------------- 539 (1045)
|.+++.+.+|..+.+...++.|+| -+++++|+..
T Consensus 675 PlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~ 754 (1160)
T KOG0209|consen 675 PLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTL 754 (1160)
T ss_pred CCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchh
Confidence 666788888999988888887777 1266666211
Q ss_pred --CCceEEEechhhHHHhhHH-HHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccc
Q psy15803 540 --NNYALIIDGLALDYALKHE-LRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHV 616 (1045)
Q Consensus 540 --~~~~~vi~G~~l~~~~~~~-~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdV 616 (1045)
....+.|+|+.++.+...+ ++..+.+ .-||||++|.||..++..+|+. |+.++|+|||.||+.|||+|||
T Consensus 755 l~~~~dlcitG~~l~~l~~~~~l~~l~~h------v~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDVGALK~AhV 827 (1160)
T KOG0209|consen 755 LAETHDLCITGSALDHLQATDQLRRLIPH------VWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDVGALKQAHV 827 (1160)
T ss_pred hhhhhhhhcchhHHHHHhhhHHHHHhhhh------eeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcchhhhhhccc
Confidence 1134678899998887654 3444433 2399999999999999999999 9999999999999999999999
Q ss_pred cccc-cCc
Q psy15803 617 GVGI-SGV 623 (1045)
Q Consensus 617 Gigi-~g~ 623 (1045)
||+. ++.
T Consensus 828 GVALL~~~ 835 (1160)
T KOG0209|consen 828 GVALLNNP 835 (1160)
T ss_pred ceehhcCC
Confidence 9976 443
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=7.2e-09 Score=128.37 Aligned_cols=127 Identities=18% Similarity=0.191 Sum_probs=99.2
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEE-EEEc-CCCcEEEEEeCCcHHHHHH
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSV-IVRT-PQNEIKVFCKGADNMILSR 908 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msv-vv~~-~~~~~~~~~KGa~e~i~~~ 908 (1045)
.+|.+.|++++++..+. .+||.++++.+.- -++. -+|.. +.-|+++.+.+.
T Consensus 480 ~hPia~Ai~~~a~~~~~-------------------------~~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~~ 532 (741)
T PRK11033 480 THPLAQAIVREAQVRGL-------------------------AIPEAESQRALAGSGIEGQVNGER--VLICAPGKLPPL 532 (741)
T ss_pred CCHHHHHHHHHHHhcCC-------------------------CCCCCcceEEEeeEEEEEEECCEE--EEEecchhhhhc
Confidence 58999999998876542 2466667666632 1221 23432 335899887541
Q ss_pred hccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecC
Q psy15803 909 LDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVED 988 (1045)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d 988 (1045)
.+++.+.++.+..+|.|++++| .|.+++|+++|+|
T Consensus 533 -------~~~~~~~~~~~~~~g~~~v~va--------------------------------------~~~~~~g~i~l~d 567 (741)
T PRK11033 533 -------ADAFAGQINELESAGKTVVLVL--------------------------------------RNDDVLGLIALQD 567 (741)
T ss_pred -------cHHHHHHHHHHHhCCCEEEEEE--------------------------------------ECCEEEEEEEEec
Confidence 1344555678899999999999 3568999999999
Q ss_pred ccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 989 KLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 989 ~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
++|+|++++|++||+.|++++|+|||+..+|.++|+++||-
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~ 608 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID 608 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999984
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.2e-09 Score=95.14 Aligned_cols=116 Identities=18% Similarity=0.325 Sum_probs=84.3
Q ss_pred EEEecCCCCchhHHHHHHHHHHHHHhhhh--------hhHHHHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhh
Q psy15803 497 MIARNPSIEPVVREFLTMLAVCHTVYIEL--------KHRTALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCL 568 (1045)
Q Consensus 497 vi~~~~~~~~~~~~~~~ti~~~~~~~~~~--------~~~~~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~ 568 (1045)
+......|..+.++...+++.+++. +++ ....+.|+.+|++...
T Consensus 21 v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r--------------------------- 72 (152)
T COG4087 21 VLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER--------------------------- 72 (152)
T ss_pred EEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee---------------------------
Confidence 3334445666777888888888665 442 2223557777776543
Q ss_pred cCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCchhhhh--hhccccccchhhhHHHHH
Q psy15803 569 TCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQA--ACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 569 ~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~--a~~~~~~~~~f~~l~~ll 646 (1045)
+++..-|+.|+.+++.|++. +++|.|||||+||.+||++||+||-.-+.|++.+ --.+|+..-+...+.+++
T Consensus 73 -----v~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 73 -----VFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred -----eecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999999999999999987 8999999999999999999999995544454432 245555566666666665
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=2e-07 Score=112.51 Aligned_cols=91 Identities=25% Similarity=0.255 Sum_probs=75.8
Q ss_pred EEEeCCcHHHHHHhccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhc
Q psy15803 896 VFCKGADNMILSRLDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIE 975 (1045)
Q Consensus 896 ~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 975 (1045)
.+.-|.+..+.+.-. .... ..+..+.+..+|..++.++
T Consensus 486 ~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va-------------------------------------- 523 (713)
T COG2217 486 RVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVA-------------------------------------- 523 (713)
T ss_pred EEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEE--------------------------------------
Confidence 455688888764311 1111 5566778889999988887
Q ss_pred cCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc
Q psy15803 976 TKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRL 1028 (1045)
Q Consensus 976 ~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi 1028 (1045)
.|-.++|+++++|++|++++++|++||+.||++.|+||||..||.+||+++||
T Consensus 524 ~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 524 VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCh
Confidence 34589999999999999999999999999999999999999999999999998
|
|
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.1e-06 Score=104.38 Aligned_cols=91 Identities=20% Similarity=0.241 Sum_probs=75.4
Q ss_pred EEeCCcHHHHHHhccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhcc
Q psy15803 897 FCKGADNMILSRLDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIET 976 (1045)
Q Consensus 897 ~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 976 (1045)
..=|.-+-+...- ....++++..++.-..+|..+..++ .
T Consensus 672 i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~--------------------------------------v 710 (951)
T KOG0207|consen 672 VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVA--------------------------------------V 710 (951)
T ss_pred EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEE--------------------------------------E
Confidence 3446666554321 1223457777777888999999888 5
Q ss_pred CeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc
Q psy15803 977 KLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRL 1028 (1045)
Q Consensus 977 ~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi 1028 (1045)
|-+++|+++++|++|+|+..+|+.||+.||++.|+||||..||.++|+++||
T Consensus 711 n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi 762 (951)
T KOG0207|consen 711 NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGI 762 (951)
T ss_pred CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCc
Confidence 6789999999999999999999999999999999999999999999999993
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.8e-07 Score=108.13 Aligned_cols=132 Identities=23% Similarity=0.291 Sum_probs=92.6
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
.+|.+.|+++++++.|..... .+ ....+| .+.+...++ |. .-+..|+++.+ + .+
T Consensus 292 ~hp~~~Ai~~~~~~~~~~~~~---------------~~-~~~~~~----~~gi~~~~~---g~-~~~~lg~~~~~-~-~~ 345 (556)
T TIGR01525 292 SHPLARAIVRYAKKRGLELPK---------------QE-DVEEVP----GKGVEATVD---GQ-EEVRIGNPRLL-E-LA 345 (556)
T ss_pred CChHHHHHHHHHHhcCCCccc---------------cc-CeeEec----CCeEEEEEC---Ce-eEEEEecHHHH-h-hc
Confidence 589999999999876532100 00 001111 222333222 21 23445777655 1 11
Q ss_pred cCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCcc
Q psy15803 911 SHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKL 990 (1045)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l 990 (1045)
.....+....++.++.+|+|++.++ .|.+++|.+.++|++
T Consensus 346 --~~~~~~~~~~~~~~~~~g~~~~~v~--------------------------------------~~~~~~g~i~~~d~~ 385 (556)
T TIGR01525 346 --AEPISASPDLLNEGESQGKTVVFVA--------------------------------------VDGELLGVIALRDQL 385 (556)
T ss_pred --CCCchhhHHHHHHHhhCCcEEEEEE--------------------------------------ECCEEEEEEEecccc
Confidence 1112233455677889999999998 356899999999999
Q ss_pred CccHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHHHHcCc
Q psy15803 991 QEYVPETIAALIKAK-ISVWVLTGDKKETAINIGYSSRL 1028 (1045)
Q Consensus 991 r~~~~~~I~~l~~ag-i~v~miTGD~~~tA~~ia~~~gi 1028 (1045)
|||++++|+.|++.| ++++|+|||+..+|..+++++|+
T Consensus 386 ~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 386 RPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred hHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 999999999999999 99999999999999999999999
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.9e-06 Score=91.04 Aligned_cols=53 Identities=32% Similarity=0.391 Sum_probs=51.6
Q ss_pred CeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 977 KLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 977 ~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..+|.++|+++||-
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~ 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc
Confidence 68999999999999999999999999999999999999999999999999993
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.7e-05 Score=100.65 Aligned_cols=91 Identities=19% Similarity=0.183 Sum_probs=76.9
Q ss_pred EEeCCcHHHHHHhccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhcc
Q psy15803 897 FCKGADNMILSRLDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIET 976 (1045)
Q Consensus 897 ~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 976 (1045)
+.+|+++.+.+.. ...+.+.+.++.++.+|.+++.+| .
T Consensus 600 ~~~G~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~v~va--------------------------------------~ 637 (834)
T PRK10671 600 LLLGNQALLNEQQ----VDTKALEAEITAQASQGATPVLLA--------------------------------------V 637 (834)
T ss_pred EEEeCHHHHHHcC----CChHHHHHHHHHHHhCCCeEEEEE--------------------------------------E
Confidence 4569999775421 112455666778889999999998 3
Q ss_pred CeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 977 KLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 977 ~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
|-.++|++++.|++|++++++|++|++.|++++|+|||+..+|..+|+++||-
T Consensus 638 ~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~ 690 (834)
T PRK10671 638 DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID 690 (834)
T ss_pred CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 45689999999999999999999999999999999999999999999999994
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.4e-05 Score=94.22 Aligned_cols=54 Identities=26% Similarity=0.270 Sum_probs=51.9
Q ss_pred cCeEEEEEEEecCccCccHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 976 TKLHLLGASAVEDKLQEYVPETIAALIKAKI-SVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 976 ~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi-~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
.|..++|.+.++|++|++++++|+.|+++|+ +++|+|||+..+|..+++++|+-
T Consensus 349 ~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~ 403 (536)
T TIGR01512 349 RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID 403 (536)
T ss_pred ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh
Confidence 4678999999999999999999999999999 99999999999999999999984
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.97 E-value=8.2e-05 Score=89.95 Aligned_cols=53 Identities=32% Similarity=0.377 Sum_probs=51.6
Q ss_pred cCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc
Q psy15803 976 TKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRL 1028 (1045)
Q Consensus 976 ~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi 1028 (1045)
.|.+++|+++++|++||+++++|++||+.|++++|+|||+..+|..+++++||
T Consensus 392 ~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 392 VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 57889999999999999999999999999999999999999999999999998
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG4383|consensus | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.081 Score=61.26 Aligned_cols=185 Identities=15% Similarity=0.210 Sum_probs=112.9
Q ss_pred EEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHH--HHhccccccccCc----------------hhhhhhh-----
Q psy15803 574 ICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAM--IQKAHVGVGISGV----------------EGLQAAC----- 630 (1045)
Q Consensus 574 v~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~a--l~~AdVGigi~g~----------------e~a~~a~----- 630 (1045)
.|..++|+.--++++.+|++ |.+|+.+|--+|--.. ..+|||+|++..- ..+|+..
T Consensus 971 LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglspl 1049 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPL 1049 (1354)
T ss_pred eccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCce
Confidence 68999999999999999999 9999999999885543 4578888743211 1111111
Q ss_pred ---------ccccc--cchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHH
Q psy15803 631 ---------ASDYS--IGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYN 699 (1045)
Q Consensus 631 ---------~~~~~--~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n 699 (1045)
.-+|- ....-.+.+++ +..|-...-+++...|.++..+.+++++|+..++.-. ++|+-.+++|..
T Consensus 1050 QiSgqLnaL~c~~~f~~ee~ikiirLI-e~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP---~i~s~sdii~lS 1125 (1354)
T KOG4383|consen 1050 QISGQLNALACDFRFDHEELIKIIRLI-ECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLP---IIFSHSDIILLS 1125 (1354)
T ss_pred eecccccccccccchhHHHHHHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc---chhccchHHHHH
Confidence 11111 11233456677 6788777888899999999999998888887777543 456666666654
Q ss_pred HHhhhhhhhhhh-cccccCChhhhh-cCCccc---ccccCcccHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q psy15803 700 VLFTAFPPLAIG-ILDQVCSARTRL-KYPILY---SQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIYGQ 765 (1045)
Q Consensus 700 ~~~t~~p~~~~~-~~~~d~~~~~~~-~~p~ly---~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~~~~ 765 (1045)
.+ -.|.+++| +|.+..+...+. .-|+.- .++.+.....-|.+.+....-.-.|+|.+....+.+
T Consensus 1126 cf--c~PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcFilkFsls~ssclIcFgf~L~afcd 1194 (1354)
T KOG4383|consen 1126 CF--CIPLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCFILKFSLSASSCLICFGFLLMAFCD 1194 (1354)
T ss_pred HH--HHHHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 33 46788888 666655544333 233322 222222222233333333333334556665555544
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00023 Score=74.00 Aligned_cols=69 Identities=19% Similarity=0.180 Sum_probs=58.4
Q ss_pred cCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHH
Q psy15803 578 VSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLF 647 (1045)
Q Consensus 578 ~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll 647 (1045)
..|..|..+++.+++. +..+.|+|||.||.+|++.|++||++.+++..+++++=.=+-.+...|..++.
T Consensus 128 ~~~~~K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~ 196 (203)
T TIGR02137 128 RQKDPKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFL 196 (203)
T ss_pred cCcchHHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCHHHHHHHHH
Confidence 4578999999999876 76899999999999999999999999999988888776666666677776663
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0011 Score=74.03 Aligned_cols=67 Identities=25% Similarity=0.351 Sum_probs=56.0
Q ss_pred cccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHH
Q psy15803 580 PLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.+.|.+.++.+.++.| ..|.|+|||.||.+|++.|++||++.+.+..++.++..+...++..+..+|
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 4689998888876544 579999999999999999999999998888899988888777766665555
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00064 Score=68.19 Aligned_cols=72 Identities=22% Similarity=0.380 Sum_probs=47.9
Q ss_pred HHHHHHHHHhcCC---CEEEEecCCccChHHHHhcccccccc-Cchhhhhhhcccccc----chhhhHHHHHHhh-cchh
Q psy15803 583 KAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAACASDYSI----GQFRFLLKLLFVH-GSWN 653 (1045)
Q Consensus 583 K~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~-g~e~a~~a~~~~~~~----~~f~~l~~lll~~-Gr~~ 653 (1045)
|...++.+.+..+ .-++++||+.||.+|++.|++++++. +.+..+++++.+... +-++.+.+.+|.+ |+|-
T Consensus 83 kp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~~~~~~~ 162 (169)
T TIGR02726 83 KTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAELILKAQGKWD 162 (169)
T ss_pred CHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHHhcCcHH
Confidence 3344444443323 56999999999999999999999885 556666666654422 2256777777543 6654
Q ss_pred h
Q psy15803 654 Y 654 (1045)
Q Consensus 654 ~ 654 (1045)
+
T Consensus 163 ~ 163 (169)
T TIGR02726 163 A 163 (169)
T ss_pred H
Confidence 4
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0031 Score=65.98 Aligned_cols=105 Identities=18% Similarity=0.166 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHHHHHhhhhhh--------HHHHHHHcCCCCCCce-E-----EEechhhHHHhhHHHHHHHHHHhhcCCc
Q psy15803 507 VVREFLTMLAVCHTVYIELKH--------RTALASLLGTTNNNYA-L-----IIDGLALDYALKHELRKDFLELCLTCNA 572 (1045)
Q Consensus 507 ~~~~~~~ti~~~~~~~~~~~~--------~~~~~~~lG~~~~~~~-~-----vi~G~~l~~~~~~~~~~~~~~~~~~~~~ 572 (1045)
+.+++.+.++..++.|.++.. ...+++.+|++..-.. + +++|.
T Consensus 78 l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~----------------------- 134 (212)
T COG0560 78 LTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR----------------------- 134 (212)
T ss_pred CCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece-----------------------
Confidence 344556668888888877333 3356888886642111 1 33343
Q ss_pred EEEE-ecCcccHHHHHHHHHhcCCC---EEEEecCCccChHHHHhccccccccCchhhhhhhccccc
Q psy15803 573 VICC-RVSPLQKAEVVELVTVNTNS---VTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYS 635 (1045)
Q Consensus 573 vv~~-r~sP~qK~~iV~~lq~~~g~---~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~ 635 (1045)
+.. .+..+.|...++.+.+..|. .+.++|||.||.|||+.|+.+++++.....++.++...-
T Consensus 135 -v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~~a~~~~~ 200 (212)
T COG0560 135 -VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIW 200 (212)
T ss_pred -eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHHHHHHhcC
Confidence 333 33447888888666654354 499999999999999999999999887666655554443
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0027 Score=67.22 Aligned_cols=65 Identities=26% Similarity=0.361 Sum_probs=53.1
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHH
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKL 645 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~l 645 (1045)
..|..+++.+.+..+ ..++|+||+.||.+|+++|++++++.+.+..+.+++.++-.++|..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCCCCHHHHHhh
Confidence 447777776655433 35889999999999999999999999999888888888888888877654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.013 Score=60.04 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=47.3
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhcccccccc-Cchhhhhhhccccc----cchhhhHHHHHH-hhcc
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAACASDYS----IGQFRFLLKLLF-VHGS 651 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~-g~e~a~~a~~~~~~----~~~f~~l~~lll-~~Gr 651 (1045)
+.|...++.+.+..| .-++||||+.||.+|++.|.+++++. +.+..+..++.++- .+.++.+.+.+| .-|+
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~ 174 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQGK 174 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCC
Confidence 456666655544323 46999999999999999999998764 33444444443332 135677777765 3366
Q ss_pred hhh
Q psy15803 652 WNY 654 (1045)
Q Consensus 652 ~~~ 654 (1045)
|-+
T Consensus 175 ~~~ 177 (183)
T PRK09484 175 LDE 177 (183)
T ss_pred hhh
Confidence 543
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0074 Score=63.12 Aligned_cols=67 Identities=21% Similarity=0.243 Sum_probs=50.3
Q ss_pred CcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHH
Q psy15803 579 SPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 579 sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.|..|...++.++.. +..++|||||.||.+|.++|++|+.....+............++++.|...+
T Consensus 129 ~p~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l 195 (205)
T PRK13582 129 QPDGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAVHTYDELLAAI 195 (205)
T ss_pred ccchHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCcccccCCHHHHHHHH
Confidence 477888888888876 7889999999999999999999997655544333322333677777776665
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.011 Score=60.46 Aligned_cols=73 Identities=16% Similarity=0.156 Sum_probs=54.3
Q ss_pred hhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy15803 688 VLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIYG 764 (1045)
Q Consensus 688 ~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~~~ 764 (1045)
.|+.+.|++|.|++.+.+|++++|..+.| +..|+.|+. .+++++++.+.+...+..|+++++++++..++...
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~~~---~~im~r~Pr-~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~ 74 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEPPD---PDIMKRPPR-DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLY 74 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS-S---TTGGGS----TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCcch---hhhhhcccc-ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 47899999999999999999999975554 234444443 57888999999988899999999988877765554
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.0081 Score=65.87 Aligned_cols=66 Identities=23% Similarity=0.256 Sum_probs=49.6
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
-.|..-++.+.+..| .-|+++|||.||.+||+.|++|+++ ++.+..+++++.+-...+=..+.++|
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i 264 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAI 264 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHH
Confidence 468887877776544 5699999999999999999999988 57788888887765444333333333
|
|
| >KOG1615|consensus | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.0063 Score=60.00 Aligned_cols=60 Identities=25% Similarity=0.366 Sum_probs=43.7
Q ss_pred ccHHHHHHHHHhcC-CCEEEEecCCccChHHHHhccccccccCchhhhhh-hccccccchhh
Q psy15803 581 LQKAEVVELVTVNT-NSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAA-CASDYSIGQFR 640 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~-g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a-~~~~~~~~~f~ 640 (1045)
.-|+++++.+++.. .+.+.|||||+||.+|+..||-=||..|.-.+..+ ..+....++|.
T Consensus 158 ggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 158 GGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred CccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHH
Confidence 46999999999853 36799999999999999998887777666444433 34444444443
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.011 Score=62.24 Aligned_cols=55 Identities=20% Similarity=0.207 Sum_probs=44.5
Q ss_pred cccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhcccc
Q psy15803 580 PLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDY 634 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~ 634 (1045)
...|...++.+.+..| ..++++||+.||.+|++.|+.|+++ ++.+..++.++.+.
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~ 203 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVT 203 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEc
Confidence 4689998888876544 3599999999999999999999988 57777777766544
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.019 Score=62.65 Aligned_cols=66 Identities=20% Similarity=0.234 Sum_probs=50.3
Q ss_pred ccHHHHHHHHHhcCCCE---EEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 581 LQKAEVVELVTVNTNSV---TLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g~~---v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..|..-++.+.+..|-. |+++||+.||.+|++.|..||++ ++.+..++.++.+-...+=..+...|
T Consensus 188 ~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l 257 (264)
T COG0561 188 VSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEAL 257 (264)
T ss_pred CchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHH
Confidence 46998888888765644 99999999999999999999988 56788888888443444444444433
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.047 Score=54.15 Aligned_cols=67 Identities=18% Similarity=0.121 Sum_probs=46.6
Q ss_pred ccHHHHHHHHHhcC---CCEEEEecCCccChHHHHhcccccccc-Cchhhhhhhccccccch----hhhHHHHHH
Q psy15803 581 LQKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAACASDYSIGQ----FRFLLKLLF 647 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi~-g~e~a~~a~~~~~~~~~----f~~l~~lll 647 (1045)
..|...++.+.+.. ...++|+||+.||.+|++.|.+++++. +.+..++.++..+-.+. |..+.+.++
T Consensus 75 ~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~ 149 (154)
T TIGR01670 75 SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELLL 149 (154)
T ss_pred cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 34666665554432 357999999999999999999999985 55767776666554332 666655553
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.017 Score=61.31 Aligned_cols=58 Identities=19% Similarity=0.228 Sum_probs=44.3
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ 638 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~ 638 (1045)
..|..-++.+.+..| ..++++||+.||.+|++.|++|+++ ++.+..++.++-+-..++
T Consensus 148 ~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~ 209 (225)
T TIGR01482 148 VNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPY 209 (225)
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCC
Confidence 468887777766533 5699999999999999999999988 466777777765543333
|
catalyze the same reaction as SPP. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.018 Score=63.20 Aligned_cols=57 Identities=21% Similarity=0.334 Sum_probs=46.4
Q ss_pred EecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhcc
Q psy15803 576 CRVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACAS 632 (1045)
Q Consensus 576 ~r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~ 632 (1045)
..++|. .|..-++.+.+..| .-|+++|||.||.+||+.|+.||++ ++.+..+++++.
T Consensus 180 ~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~ 242 (272)
T PRK15126 180 LEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPH 242 (272)
T ss_pred EEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCC
Confidence 345554 59888888877654 5699999999999999999999988 577888888764
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.024 Score=61.95 Aligned_cols=57 Identities=25% Similarity=0.289 Sum_probs=45.7
Q ss_pred EecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhcc
Q psy15803 576 CRVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACAS 632 (1045)
Q Consensus 576 ~r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~ 632 (1045)
..+.|. .|..-++.+.+..| .-|+++|||.||.+||+.|+.||++ ++.+..+++++.
T Consensus 182 ~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~ 244 (266)
T PRK10976 182 LEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPE 244 (266)
T ss_pred EEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCC
Confidence 345553 58888888776644 4699999999999999999999988 577888888763
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.025 Score=46.75 Aligned_cols=43 Identities=16% Similarity=0.134 Sum_probs=35.2
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhcc
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQI 97 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i 97 (1045)
++.+||.|.+...+.+. +++.+++||.++++++++++++++++
T Consensus 19 r~~~~G~N~l~~~~~~s---~~~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 19 RLERYGPNELPPPKKRS---PLLRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHhCCCCCCCCCCCC---HHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35789999999886443 24667899999999999999999876
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.025 Score=62.02 Aligned_cols=65 Identities=17% Similarity=0.219 Sum_probs=45.6
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHH
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKL 645 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~l 645 (1045)
..|..-++.+.+..| .-++++||+.||.+|++.|++|+++ .+.+..+++++.+.-..+=..+.++
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~ 266 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEF 266 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHH
Confidence 358877776655434 4599999999999999999999976 4556667777665544333333333
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.017 Score=48.58 Aligned_cols=40 Identities=23% Similarity=0.289 Sum_probs=32.8
Q ss_pred CCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHh
Q psy15803 53 SCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQ 95 (1045)
Q Consensus 53 ~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~ 95 (1045)
..+||.|.+...+-.. +++.|++||.++++++++++++++
T Consensus 30 ~~~~G~N~l~~~~~~s---~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 30 RKKYGPNELPEPKKKS---LWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHSSSSTTTTTSSS---HHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHhcccccccccccCc---HHHHHHHHHHhHHHHHHHHHHHHC
Confidence 4689999996655544 357779999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.032 Score=67.03 Aligned_cols=58 Identities=29% Similarity=0.407 Sum_probs=47.6
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ 638 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~ 638 (1045)
-.|..-++.+.+..| .-|+++|||.||.+||+.|+.||++ ++.+..+++++.+-...+
T Consensus 506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNd 567 (580)
T PLN02887 506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSND 567 (580)
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCC
Confidence 469888888877655 4699999999999999999999988 678888988886654433
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.039 Score=58.83 Aligned_cols=62 Identities=23% Similarity=0.244 Sum_probs=47.4
Q ss_pred EEecCccc--HHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhcccccc
Q psy15803 575 CCRVSPLQ--KAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSI 636 (1045)
Q Consensus 575 ~~r~sP~q--K~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~ 636 (1045)
+....|.. |..-++.+.+..| .-++++|||.||.+|++.|++|+++ ++.+..+++++.+-..
T Consensus 148 ~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~ 215 (230)
T PRK01158 148 AIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEK 215 (230)
T ss_pred EEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecC
Confidence 34556655 8888888876543 4699999999999999999999988 5677777777655433
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.043 Score=57.79 Aligned_cols=68 Identities=15% Similarity=0.129 Sum_probs=48.2
Q ss_pred ccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccC-chhhhhhhccccccchhhhHHHHHHhh
Q psy15803 581 LQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISG-VEGLQAACASDYSIGQFRFLLKLLFVH 649 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g-~e~a~~a~~~~~~~~~f~~l~~lll~~ 649 (1045)
..|..+++.++.. ...+.|||||.||..|++.||++++-.. .+-.+...-......+|..+.+.|..|
T Consensus 143 ~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~ 211 (214)
T TIGR03333 143 CCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELENV 211 (214)
T ss_pred CCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHH
Confidence 4699999988876 6778999999999999999999765321 122333333455557777777776433
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.046 Score=58.86 Aligned_cols=56 Identities=20% Similarity=0.270 Sum_probs=44.9
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhcccccc
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSI 636 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~ 636 (1045)
..|..-++.+.+..| ..++++||+.||.+|++.|+.|+++ .+++..+..++.+...
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~ 244 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPS 244 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESS
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecC
Confidence 779998888876533 5799999999999999999999988 4667777777765544
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=93.31 E-value=0.057 Score=58.63 Aligned_cols=59 Identities=24% Similarity=0.361 Sum_probs=45.3
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccc
Q psy15803 577 RVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYS 635 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~ 635 (1045)
.+.|. .|..-++.+.+..+ ..++++||+.||.+|++.|+.|+++ .+.+..+++++.+.-
T Consensus 181 eI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~ 245 (256)
T TIGR00099 181 EITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTD 245 (256)
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEec
Confidence 44443 58888888877643 5699999999999999999999977 556666776665543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.17 Score=54.15 Aligned_cols=55 Identities=24% Similarity=0.305 Sum_probs=42.0
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhcccccccc-Cchhhhhhhc
Q psy15803 577 RVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAACA 631 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~-g~e~a~~a~~ 631 (1045)
...|. .|..-++.+.++.| .-++++||+.||.+|++.|+.||++. +.+-.++.++
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhc
Confidence 45554 79999998877644 35899999999999999999999874 4444555544
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.15 Score=52.83 Aligned_cols=45 Identities=31% Similarity=0.468 Sum_probs=35.0
Q ss_pred cCcccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccccC
Q psy15803 578 VSPLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGISG 622 (1045)
Q Consensus 578 ~sP~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~g 622 (1045)
..|..|..+++.+.+..+ ..+.|+||+.||.+|+++|++++++.+
T Consensus 143 ~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 143 VTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGD 190 (201)
T ss_pred EccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECC
Confidence 346678777777654422 459999999999999999999997754
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.24 Score=52.44 Aligned_cols=65 Identities=28% Similarity=0.404 Sum_probs=41.8
Q ss_pred ccHHHHHHHHHhcCC-CEEEEecCCccChHHHHh--ccccccccCc-hhhhhhhccccccchhhhHHHH
Q psy15803 581 LQKAEVVELVTVNTN-SVTLAIGDGANDVAMIQK--AHVGVGISGV-EGLQAACASDYSIGQFRFLLKL 645 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g-~~v~~iGDG~ND~~al~~--AdVGigi~g~-e~a~~a~~~~~~~~~f~~l~~l 645 (1045)
..|.+.++.+.+..+ ..++|+||+.||..|.++ ++++++..+. +........++..+++..|.++
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 348788877765433 568999999999999777 4555543332 1112233467777777776654
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.092 Score=57.57 Aligned_cols=46 Identities=22% Similarity=0.347 Sum_probs=36.6
Q ss_pred EecCc--ccHHHHHHHHHhcC------CCEEEEecCCccChHHHHhcccccccc
Q psy15803 576 CRVSP--LQKAEVVELVTVNT------NSVTLAIGDGANDVAMIQKAHVGVGIS 621 (1045)
Q Consensus 576 ~r~sP--~qK~~iV~~lq~~~------g~~v~~iGDG~ND~~al~~AdVGigi~ 621 (1045)
-.++| -.|..-++.+.+.. ...|+++|||.||.+||+.|++||++.
T Consensus 179 iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 179 WHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred EEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 35555 56888777776543 356999999999999999999999875
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.13 Score=55.54 Aligned_cols=44 Identities=20% Similarity=0.213 Sum_probs=35.0
Q ss_pred cccHHHHHHHHHhcC-----CCEEEEecCCccChHHHHhccccccccCc
Q psy15803 580 PLQKAEVVELVTVNT-----NSVTLAIGDGANDVAMIQKAHVGVGISGV 623 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~-----g~~v~~iGDG~ND~~al~~AdVGigi~g~ 623 (1045)
-.+|.+-|+.|++.- ..+++++|||-||.+||..||++|-|.+.
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~~~ 254 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVLPSP 254 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEecCC
Confidence 348988888776531 34899999999999999999999966443
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=91.43 E-value=0.13 Score=55.83 Aligned_cols=43 Identities=16% Similarity=0.309 Sum_probs=33.5
Q ss_pred ccHHHHHHHHHhcC-----CCEEEEecCCccChHHHHhccccccccCc
Q psy15803 581 LQKAEVVELVTVNT-----NSVTLAIGDGANDVAMIQKAHVGVGISGV 623 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~-----g~~v~~iGDG~ND~~al~~AdVGigi~g~ 623 (1045)
..|..-++.+.+.. ...++++||+.||.+|++.|+.||++...
T Consensus 175 ~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 175 SDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred CCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 45766666665543 34599999999999999999999988543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.32 E-value=0.14 Score=56.11 Aligned_cols=46 Identities=24% Similarity=0.326 Sum_probs=37.1
Q ss_pred cHHHHHHHHHhcC---C-CEEEEecCCccChHHHHhccccccc-cCchhhh
Q psy15803 582 QKAEVVELVTVNT---N-SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQ 627 (1045)
Q Consensus 582 qK~~iV~~lq~~~---g-~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~ 627 (1045)
.|..-++.+.+.. . .-|+++||+.||.+|++.|++|+++ ++.+..+
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 6777776666432 4 7899999999999999999999988 5666666
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=90.98 E-value=0.17 Score=53.58 Aligned_cols=39 Identities=28% Similarity=0.480 Sum_probs=31.3
Q ss_pred cHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccc
Q psy15803 582 QKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGI 620 (1045)
Q Consensus 582 qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi 620 (1045)
.|..-++.+.+.. ..-|+++||+.||.+|++.|+.||++
T Consensus 179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 4777776665543 35699999999999999999999874
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=90.28 E-value=0.31 Score=50.02 Aligned_cols=39 Identities=28% Similarity=0.379 Sum_probs=30.3
Q ss_pred EEEecCcc-c--HHHHHHHH---H--hcCCCEEEEecCCccChHHHH
Q psy15803 574 ICCRVSPL-Q--KAEVVELV---T--VNTNSVTLAIGDGANDVAMIQ 612 (1045)
Q Consensus 574 v~~r~sP~-q--K~~iV~~l---q--~~~g~~v~~iGDG~ND~~al~ 612 (1045)
...+.+|. + |.+.++.+ . ......+.++|||.||.||||
T Consensus 146 ~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 146 FTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred eeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 44555555 4 99999999 1 123788999999999999986
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=89.54 E-value=0.34 Score=51.18 Aligned_cols=64 Identities=14% Similarity=0.138 Sum_probs=43.0
Q ss_pred cHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccC-chhhhhhhccccccchhhhHHHHH
Q psy15803 582 QKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISG-VEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 582 qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g-~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.|..+++.++.. ...+.|||||.||..|.++||+.++... .+.++.-.-..+-.++|..+...|
T Consensus 148 ~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 148 CKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred chHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHHH
Confidence 488888888766 5679999999999999999999665321 122222223344446666666655
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=89.42 E-value=0.28 Score=52.09 Aligned_cols=41 Identities=15% Similarity=0.222 Sum_probs=31.8
Q ss_pred cccHHHHHHHHHhcC-----CCEEEEecCCccChHHHHhccccccc
Q psy15803 580 PLQKAEVVELVTVNT-----NSVTLAIGDGANDVAMIQKAHVGVGI 620 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~-----g~~v~~iGDG~ND~~al~~AdVGigi 620 (1045)
-..|..-++.+.+.. ...|+++||+.||.+||+.|+.||.+
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 456777777765442 23689999999999999999999843
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=89.01 E-value=1 Score=46.80 Aligned_cols=44 Identities=11% Similarity=0.119 Sum_probs=34.1
Q ss_pred CcccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccccC
Q psy15803 579 SPLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGISG 622 (1045)
Q Consensus 579 sP~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~g 622 (1045)
.++.|...++.+.+..+ ..+.++||+.+|.+|++.|+.++.+..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 45678887776654323 368999999999999999999986654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=88.82 E-value=0.41 Score=48.95 Aligned_cols=37 Identities=24% Similarity=0.291 Sum_probs=30.8
Q ss_pred ccHHHHHHHHHhcCCCEEEEecCCccChHHHHhcccc
Q psy15803 581 LQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVG 617 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVG 617 (1045)
..|.++++.+++.....+++||||.||..|.++||+-
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcc
Confidence 3599999988765256799999999999999999864
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=88.66 E-value=0.27 Score=51.30 Aligned_cols=40 Identities=28% Similarity=0.426 Sum_probs=34.0
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI 620 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi 620 (1045)
..|...++.+.++.+ ..++++||+.||.+|++.|++||++
T Consensus 162 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 162 VDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 789888888876544 4599999999999999999999864
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.24 E-value=0.35 Score=58.34 Aligned_cols=46 Identities=13% Similarity=0.211 Sum_probs=35.6
Q ss_pred cccHHHHHHHHHhcCC---CEEEE--ecCCccChHHHHhccccccccCchh
Q psy15803 580 PLQKAEVVELVTVNTN---SVTLA--IGDGANDVAMIQKAHVGVGISGVEG 625 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g---~~v~~--iGDG~ND~~al~~AdVGigi~g~e~ 625 (1045)
--+|..-++.|.+..+ .-|.+ +|||.||.+||+.||.||++.+..+
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~ 661 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGN 661 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCC
Confidence 5789999988876632 23444 4999999999999999998865543
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=88.10 E-value=0.65 Score=50.14 Aligned_cols=51 Identities=27% Similarity=0.380 Sum_probs=38.7
Q ss_pred ecCc--ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHh-cccccccc-Cchhhh
Q psy15803 577 RVSP--LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQK-AHVGVGIS-GVEGLQ 627 (1045)
Q Consensus 577 r~sP--~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~-AdVGigi~-g~e~a~ 627 (1045)
.+.| ..|..-++.+.+..| ..|+++||+.||.+|++. +..|+++. +.+..+
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k 217 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELL 217 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHH
Confidence 4555 579888888877543 579999999999999998 67899874 334333
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.23 E-value=1.4 Score=42.57 Aligned_cols=40 Identities=18% Similarity=0.269 Sum_probs=27.7
Q ss_pred cHHHHHHHHHhcC---CCEEEEecCCccChHHHHhcccccccc
Q psy15803 582 QKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGIS 621 (1045)
Q Consensus 582 qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi~ 621 (1045)
+|....+.|.+.. -.-|+++||-.||-|++++...+++..
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~ 125 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA 125 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc
Confidence 4554444444332 245899999999999999877777553
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=86.52 E-value=0.52 Score=54.77 Aligned_cols=53 Identities=26% Similarity=0.316 Sum_probs=39.6
Q ss_pred EecCcc--cHHHHHHHHHhcC------CCEEEEecCCccChHHHHhcc-cccccc-Cchhhhh
Q psy15803 576 CRVSPL--QKAEVVELVTVNT------NSVTLAIGDGANDVAMIQKAH-VGVGIS-GVEGLQA 628 (1045)
Q Consensus 576 ~r~sP~--qK~~iV~~lq~~~------g~~v~~iGDG~ND~~al~~Ad-VGigi~-g~e~a~~ 628 (1045)
-.+.|. .|..-++.|.+.. ...|+++||+.||.+||+.|+ .||.+. +.+..++
T Consensus 167 ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~ 229 (413)
T PLN02382 167 LDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQ 229 (413)
T ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHH
Confidence 345554 4888888887663 347899999999999999999 699883 4444443
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=85.64 E-value=0.65 Score=50.09 Aligned_cols=42 Identities=17% Similarity=0.266 Sum_probs=34.8
Q ss_pred ccHHHHHHHHHhcCCCEEEEecC----CccChHHHHhc-cccccccCc
Q psy15803 581 LQKAEVVELVTVNTNSVTLAIGD----GANDVAMIQKA-HVGVGISGV 623 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g~~v~~iGD----G~ND~~al~~A-dVGigi~g~ 623 (1045)
-.|..=++.|.+. ..-|+++|| |-||.+||+.| -.|+|+.+.
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~ 233 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNP 233 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCH
Confidence 5688888888877 678999999 99999999976 677777544
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.81 E-value=2 Score=45.31 Aligned_cols=73 Identities=27% Similarity=0.293 Sum_probs=44.2
Q ss_pred EEEecCcccH---HHHHHHHHhcCC--CEEEEecCCccChHHHHhcccc-ccc-cC--chhhhhhhccccccchhhhHHH
Q psy15803 574 ICCRVSPLQK---AEVVELVTVNTN--SVTLAIGDGANDVAMIQKAHVG-VGI-SG--VEGLQAACASDYSIGQFRFLLK 644 (1045)
Q Consensus 574 v~~r~sP~qK---~~iV~~lq~~~g--~~v~~iGDG~ND~~al~~AdVG-igi-~g--~e~a~~a~~~~~~~~~f~~l~~ 644 (1045)
+++...+..| ..+...+++... ..++||||..+|..|=++|++- ||+ .| .+..-.....|+..+++..|..
T Consensus 136 ~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~ 215 (220)
T COG0546 136 VGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLA 215 (220)
T ss_pred EcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHH
Confidence 4434444444 334444444422 3699999999999999999844 233 22 2233344556667777777766
Q ss_pred HH
Q psy15803 645 LL 646 (1045)
Q Consensus 645 ll 646 (1045)
.+
T Consensus 216 ~l 217 (220)
T COG0546 216 LL 217 (220)
T ss_pred HH
Confidence 55
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=84.75 E-value=1.1 Score=45.97 Aligned_cols=39 Identities=21% Similarity=0.143 Sum_probs=36.0
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccC
Q psy15803 992 EYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVG 1030 (1045)
Q Consensus 992 ~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~ 1030 (1045)
+++++.|+.++++|++++++||+....+..+|+.+|+-.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 555599999999999999999999999999999999875
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=84.47 E-value=1.9 Score=40.86 Aligned_cols=45 Identities=18% Similarity=0.106 Sum_probs=41.3
Q ss_pred EecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 985 AVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 985 ~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
.-..++.+++++.+++|++.|++++++||-....+..+.+..|+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 455689999999999999999999999999999999999999874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=82.78 E-value=2.2 Score=44.92 Aligned_cols=41 Identities=22% Similarity=0.114 Sum_probs=38.9
Q ss_pred ccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 989 KLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 989 ~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
++++++++.++.|++.|+++.++||.....+..+.+..|+-
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~ 125 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD 125 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999999999974
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=82.65 E-value=26 Score=41.54 Aligned_cols=44 Identities=14% Similarity=0.049 Sum_probs=31.4
Q ss_pred cCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCc
Q psy15803 578 VSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGV 623 (1045)
Q Consensus 578 ~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~ 623 (1045)
+.|+.|.+.++..-. .+-+.++||..||.++++.|+-.+.++..
T Consensus 124 ~kg~~K~~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~~av~Vn~~ 167 (479)
T PRK08238 124 LKGAAKAAALVEAFG--ERGFDYAGNSAADLPVWAAARRAIVVGAS 167 (479)
T ss_pred cCCchHHHHHHHHhC--ccCeeEecCCHHHHHHHHhCCCeEEECCC
Confidence 456777665442211 12257899999999999999999988654
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.61 E-value=2.1 Score=44.86 Aligned_cols=44 Identities=20% Similarity=0.048 Sum_probs=41.5
Q ss_pred CccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCC
Q psy15803 988 DKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQ 1031 (1045)
Q Consensus 988 d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~ 1031 (1045)
.+++|++.+.++.+|++|.+|+++||=-..-+..+|+.+|+-..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~ 119 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYV 119 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchh
Confidence 78999999999999999999999999999999999999998643
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=81.93 E-value=0.73 Score=46.62 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=29.3
Q ss_pred cCcccHHHHHHHHHhcC---CCEEEEecCCccChHHHHhc
Q psy15803 578 VSPLQKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKA 614 (1045)
Q Consensus 578 ~sP~qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~A 614 (1045)
..+..|..+++.+++.. ...+.++|||.||.+|++.|
T Consensus 138 ~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 138 PEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 44678999998876542 24689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=81.73 E-value=1.7 Score=44.32 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=46.3
Q ss_pred cHHHHHHHHHhcCC--CEEEEecCCccChHHHHhcc----ccccccCchhhhhhhccccccchhhhHHHHHH
Q psy15803 582 QKAEVVELVTVNTN--SVTLAIGDGANDVAMIQKAH----VGVGISGVEGLQAACASDYSIGQFRFLLKLLF 647 (1045)
Q Consensus 582 qK~~iV~~lq~~~g--~~v~~iGDG~ND~~al~~Ad----VGigi~g~e~a~~a~~~~~~~~~f~~l~~lll 647 (1045)
.|+++++.+-+..+ ...+.+||.+.|+.||+.+. +.|+.+|.+=+..-+++....++.+.+..+|-
T Consensus 191 ~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 191 EKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred chhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccccccceEEeccchhhhhHHHH
Confidence 35555554444322 34578999999999999875 44567899877777777777777777766663
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=80.73 E-value=2.6 Score=45.35 Aligned_cols=70 Identities=16% Similarity=0.215 Sum_probs=45.5
Q ss_pred EEEecCcccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhc--------cccccccCchhhhhhhccccccchhhhH
Q psy15803 574 ICCRVSPLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKA--------HVGVGISGVEGLQAACASDYSIGQFRFL 642 (1045)
Q Consensus 574 v~~r~sP~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~A--------dVGigi~g~e~a~~a~~~~~~~~~f~~l 642 (1045)
+-.+-.+.+|...++.+.+..+ ..++|+||+.||..|++.+ ..||.+. ++. ....+++..++...+
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v 235 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQV 235 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHH
Confidence 4445566789988887766533 4699999999999999999 2344332 111 123345566666666
Q ss_pred HHHH
Q psy15803 643 LKLL 646 (1045)
Q Consensus 643 ~~ll 646 (1045)
.+.|
T Consensus 236 ~~~L 239 (244)
T TIGR00685 236 LEFL 239 (244)
T ss_pred HHHH
Confidence 5554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1045 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 4e-15 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 5e-14 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-04 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 6e-14 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-11 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-10 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 5e-07 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 1e-06 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 3e-06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-06 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 6e-06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 8e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 3e-05 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 79.3 bits (196), Expect = 4e-15
Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 25/158 (15%)
Query: 866 QRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLDSHSKYVDETKTHLEQ 925
++ L F KR ++ KGA IL + + + + +++
Sbjct: 390 AGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDK 449
Query: 926 FASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASA 985
+A G R+L VA + K E +G
Sbjct: 450 YAERGLRSL--AVA------RQVVPEKTK-----------------ESPGAPWEFVGLLP 484
Query: 986 VEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIG 1023
+ D + ETI + ++V ++TGD+ G
Sbjct: 485 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 522
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 5e-14
Identities = 41/219 (18%), Positives = 68/219 (31%), Gaps = 56/219 (25%)
Query: 833 PDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQN 892
+KA + K + A +Y +L F K++ +V +PQ
Sbjct: 421 AIDKAFLKSLKYYPR-------------AKSVLSKYKVLQFHPFDPVSKKVVAVVESPQG 467
Query: 893 EIKVFCKGADNMILSRLDSHSKYVDETKTHL----EQFASSGYRTLCFGVAKIPEEKYKN 948
E KGA +L ++ +E +FA+ G+R+L GVA K
Sbjct: 468 ERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSL--GVA------RKR 519
Query: 949 WSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISV 1008
E +LG D + +T+ +S+
Sbjct: 520 G-------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSI 554
Query: 1009 WVLTGDKKETAINIGYSSRLVGQDTPLLD---LDGYSLD 1044
+LTGD A R +G T + + L
Sbjct: 555 KMLTGDAVGIARETS---RQLGLGTNIYNAERLGLGGGG 590
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 63/408 (15%), Positives = 131/408 (32%), Gaps = 128/408 (31%)
Query: 59 NKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVV 118
N++ K + F F A+L + + ++++
Sbjct: 103 NQMKEEKENHFLKF----LGFFVGPIQFVMEGAAVLAAG-----LEDWVDFGVICGLLLL 153
Query: 119 SGI---------KEIIEDIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNN 169
+ + I++++K+ LA V+R+G + + ++ GDI++V
Sbjct: 154 NAVVGFVQEFQAGSIVDELKKTLA------LKAVVLRDGTLKEIEAPEVVPGDILQVEEG 207
Query: 170 SFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECD 229
+ P D +++ + L+V Q S+LT SLA ++
Sbjct: 208 TIIPADGRIVT----------------DDAFLQVDQ-----SALTG-ESLA-----VDKH 240
Query: 230 HPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDS------KL 283
++ F +AV RG ++ TG ++ L
Sbjct: 241 KGDQV---FAS-------SAV--------KRGEA-------FVVITATGDNTFVGRAAAL 275
Query: 284 MKNATSA--PLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRN 341
+ A+ ++ I +L +L++ I +W R+
Sbjct: 276 VNAASGGSGHFTEV-LNGIGT----ILLILVIFTLLI------VWVSS--------FYRS 316
Query: 342 PSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAAR---TS 398
L + + +P+ L + + A + A +
Sbjct: 317 NPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGA------AYL---------AKKKAIVQ 361
Query: 399 NLN--EELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNV 444
L+ E L V+ + SDKTGTLT+N + S+ V + ++
Sbjct: 362 KLSAIESLAGVEILCSDKTGTLTKNKL-----SLHDPYTVAGVDPEDL 404
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 6e-14
Identities = 50/251 (19%), Positives = 76/251 (30%), Gaps = 41/251 (16%)
Query: 797 NPSIEPVVREFLTMLAVCH--TVIPEMKDGVLQYHAS-SPDEKALI-LGAKA---FGYVF 849
+ E T+ A+C+ ++ G Y E AL L K V
Sbjct: 404 RSGQFDGLVELATICALCNDSSLDFNETKG--VYEKVGEATETALTTLVEKMNVFNTEVR 461
Query: 850 TSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEI-----KVFCKGADNM 904
+ Q LEF+ DRK MSV ++ K+F KGA
Sbjct: 462 NLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEG 521
Query: 905 ILSR------------LDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSAL 952
++ R + K + R L +A
Sbjct: 522 VIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL--ALA------------- 566
Query: 953 YKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLT 1012
++ + ET L +G + D ++ V +I A I V ++T
Sbjct: 567 TRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMIT 626
Query: 1013 GDKKETAINIG 1023
GD K TAI I
Sbjct: 627 GDNKGTAIAIC 637
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 1e-11
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 34/128 (26%)
Query: 833 PDEKALILGAKAFGYVFTSKHYKEI-EITALGETQRYVILNVLEFTSDRKRMSVIVRTPQ 891
+ A++ G + +++I EI F +R+RMSV+V
Sbjct: 35 LLDTAVLEGTDEESARSLASRWQKIDEI---------------PFDFERRRMSVVVAENT 79
Query: 892 NEIKVFCKGADNMILSRLDSHSKYV----------DETKTHL----EQFASSGYRTLCFG 937
++ CKGA IL+ V D + + G R +
Sbjct: 80 EHHQLVCKGALQEILNV----CSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVA 135
Query: 938 VAKIPEEK 945
+P +
Sbjct: 136 TKYLPARE 143
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-10
Identities = 40/206 (19%), Positives = 61/206 (29%), Gaps = 43/206 (20%)
Query: 833 PDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTP-- 890
E AL+ F+ G +R+ + + F S K I
Sbjct: 461 ASETALL--------KFSELTLGNAM----GYRERFPKVCEIPFNSTNKFQLSIHTLEDP 508
Query: 891 -QNEIKVFCKGADNMILSR------------LDSHSKYVDETKTHLEQFASSGYRTLCFG 937
+ KGA +L R LD + + +T G R L F
Sbjct: 509 RDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWR--EAFQTAYLSLGGLGERVLGFC 566
Query: 938 VAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPET 997
+ E+ Y A E + L G ++ D + VP+
Sbjct: 567 QLYLSEKDYPPGYAFD--------------VEAMNFPTSGLSFAGLVSMIDPPRATVPDA 612
Query: 998 IAALIKAKISVWVLTGDKKETAINIG 1023
+ A I V ++TGD TA I
Sbjct: 613 VLKCRTAGIRVIMVTGDHPITAKAIA 638
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 2e-09
Identities = 38/173 (21%), Positives = 56/173 (32%), Gaps = 31/173 (17%)
Query: 866 QRYVILNVLEFTSDRKRMSVIVRTPQ---NEIKVFCKGADNMILSR------------LD 910
R + + F S K I + + + KGA IL R L
Sbjct: 477 DRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLK 536
Query: 911 SHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEV 970
K + + + G R L F +PE+KY A+
Sbjct: 537 EDMK--EAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFD--------------ADE 580
Query: 971 CEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIG 1023
T L +G A+ D + VP+ + A I V ++TGD TA I
Sbjct: 581 PNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA 633
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 2e-07
Identities = 73/481 (15%), Positives = 128/481 (26%), Gaps = 148/481 (30%)
Query: 638 QFRFLLKLL----------FVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGWSGQ 687
L L FV N Y F +M S
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRIN-------YKF-------LMSPIKTEQRQPSMM 108
Query: 688 -VLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRL------KYPILY----------- 729
++ LYN F + L R L K ++
Sbjct: 109 TRMYIEQRDRLYNDN-QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVA 167
Query: 730 SQTANT------FNVKIFWIWIGNALFHSMLMFWIPMLIYGQGTIWANGKDGGYLVLGNI 783
+ + KIFW+ + N ++ + L+Y W + D + I
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 784 VYTVTEQSRMIARNPSIEPVVREFLTMLAVCHTVIPEMKDGVLQYHASSPDEKALILGAK 843
E R++ + + L V V + KA
Sbjct: 228 HSIQAELRRLLKS--------KPYENCLLVL--------LNVQ-------NAKAW----N 260
Query: 844 AFGY----VFTSKHYKEI--EITALGETQRYVILNVLEFTSDRKR--MSVIVRTPQNEI- 894
AF + T++ +K++ ++A T + + + T D + + + ++
Sbjct: 261 AFNLSCKILLTTR-FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319
Query: 895 KVFCKG---ADNMI-------LSRLDSHSKYVDETKTH------LEQFASSGYRTL--CF 936
+ ++I L+ D + K+V+ K L + YR +
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWD-NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378
Query: 937 GV----AKIPEEKYKN-WSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQ 991
V A IP W + I ++ KLH S VE + +
Sbjct: 379 SVFPPSAHIPTILLSLIW--------------FDVIKSDVMVVVNKLH--KYSLVEKQPK 422
Query: 992 EYVPETIAALIKAKISVWVLTGDKKETAINIGYS-SRLVGQ----------DTPLLDLDG 1040
E IS+ + + K N +V D LD
Sbjct: 423 ES-----------TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 1041 Y 1041
Y
Sbjct: 472 Y 472
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 2e-05
Identities = 89/663 (13%), Positives = 177/663 (26%), Gaps = 213/663 (32%)
Query: 280 DSKLMKNATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLS 339
D K +++ + L + +D I ++ + L L +S + + + +L
Sbjct: 34 DCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ---KFVEE--VLR 88
Query: 340 RNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFI-QATFINNDMDMYYEPTDTPAAARTS 398
N F L + + Q ++ +I Q + ND ++ +
Sbjct: 89 INYKF---------LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF-AKYNVSRLQPYL 138
Query: 399 NLNEEL------------GMVKFVFSDKTGTLTRNVM-EFKI-CSVAGNILVPNF--NSN 442
L + L G++ KT + +V +K+ C + I F N
Sbjct: 139 KLRQALLELRPAKNVLIDGVLGS---GKT-WVALDVCLSYKVQCKMDFKI----FWLNLK 190
Query: 443 NVQEQSRMIARNPSIEPVVREFLTML-AVCHTVCSVAGNILVPNFNSNNVKEQSRMIARN 501
N L ML + + + PN+ S + S + R
Sbjct: 191 NCNS--------------PETVLEMLQKLLYQ--------IDPNWTSRS-DHSSNIKLRI 227
Query: 502 PSIEPVVREFLTMLAVCHTVYIELKHRTALASLLGTTNNNYALIIDGLALDYALKHELRK 561
SI+ +R L + L L++ +
Sbjct: 228 HSIQAELRRLLK----------SKPYENCL------------LVLL----NVQNAKAW-N 260
Query: 562 DFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGIS 621
F + C++ L+T VT + + + +
Sbjct: 261 AFN---------LSCKI----------LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301
Query: 622 GVEGLQAACASDYSIGQFR--------FLLKLL--FVH---GSWNY------------NR 656
V+ L D L ++ + +W+
Sbjct: 302 EVKSLLLKYL-DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360
Query: 657 MCLLILYS-----FYK---------NICLYVME-LWFAIYSGWSGQV--------LFERW 693
L +L + +I ++ +WF + V L E+
Sbjct: 361 SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420
Query: 694 ----TIGLYNVLFTAFPPLAIGILDQVCSARTRL------KYPILYSQTANTFNVK---- 739
TI + ++ L L Y I + ++
Sbjct: 421 PKESTISIPSIYLE---------LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 740 -IFWIWIGNALFH--------SMLMF--------WIPMLIYGQGTIWANGKDGGYLVLGN 782
+ IG H M +F ++ I T W + N
Sbjct: 472 YFYS-HIG---HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS-----ILN 522
Query: 783 IVYTVTEQSRMIARN-PSIEPVVREFLTMLAVC--HTVIPEMKDGVLQYHASSPDEKALI 839
+ + I N P E +V L L + + + D +L+ A +++A+
Sbjct: 523 TLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD-LLRI-ALMAEDEAIF 580
Query: 840 LGA 842
A
Sbjct: 581 EEA 583
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 3e-05
Identities = 80/598 (13%), Positives = 167/598 (27%), Gaps = 219/598 (36%)
Query: 34 VDCITGKADHR---VININAPQ-----SCKFV----GNKISTAKYSLVTFFPCFLFEQFR 81
+D TG+ ++ ++++ CK V + +S + +
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID-------HIIMSKD 59
Query: 82 RYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH----LADGEI 137
S LF LL + +++ +E++ R L I
Sbjct: 60 AVSGTLRLFWTLLSK-----QE---------------EMVQKFVEEVLRINYKFLMS-PI 98
Query: 138 NHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNS--FFPGD-------------LMVLSTS 182
+Y+EQ +D ++YN++ F + L+ L +
Sbjct: 99 KTEQRQPSMMTRMYIEQ-RD-------RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA 150
Query: 183 EN---EGM--CYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQI------ECDHP 231
+N +G+ G+T + + ++ +I C+ P
Sbjct: 151 KNVLIDGVLGS--------GKTWVAL-------DVCLSYKVQCKMDFKIFWLNLKNCNSP 195
Query: 232 -------NRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLM 284
+ +Y N+ R I LR ++ +L+
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSR-----SDHSSNIKLRIHSIQAE------------LRRLL 238
Query: 285 KNATSAPLKRS--TVDKITNTQTIMLF-----VLLLALCFISAAASTIWTLGRNAGDWYL 337
K S P + + + N + F +LL T R
Sbjct: 239 K---SKPYENCLLVLLNVQNAKAWNAFNLSCKILLT-------------T--RFKQVTDF 280
Query: 338 LSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAART 397
LS + H I L ++ + ++ ++ +++ P D P T
Sbjct: 281 LSAATTTH------ISLDHHSMTLTPDEVKSLL----LKYLDCR------PQDLPREVLT 324
Query: 398 SN-LNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPS 456
+N L ++ D T N+ N + + +I S
Sbjct: 325 TNPR--RLSIIAESIRDGLATWD------------------NWKHVNCDKLTTIIES--S 362
Query: 457 IE----PVVREFLTMLAVCHTVCSVAGNILVPNFNSN-NVKEQSRMIARNPSIEPVVREF 511
+ R+ L+V F + ++ + I+ V
Sbjct: 363 LNVLEPAEYRKMFDRLSV---------------FPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 512 LTMLAVCHTVYIELKHRTALASLLGTTNNNYALIIDGLALDYALKHE----LRKDFLE 565
+ L H+ SL+ + I + L+ +K E L + ++
Sbjct: 408 VNKL-----------HK---YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 583 KAEVVELVTVNTN-SVTLAIGDGANDVAMIQKAHVGVGISGVEGLQA-ACASDYSIGQFR 640
K +V++L+ + + IGDGA D+ A +G G Q + + I F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 641 FLLKLL 646
LL L
Sbjct: 218 ELLGEL 223
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-06
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 598 TLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLL 646
T+A+GDGAND++M +KA + + L+ R +LK +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYI 210
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 3e-06
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 598 TLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHG 650
T+A+GDGAND+ M+ A +GV ++A ++ +F L ++ +
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVAYHAKPKVEAKA--QTAV-RFAGLGGVVCILS 313
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 4e-06
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 598 TLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFV 648
+A GDGAND+ M++ A G+ ++ + I + LLF+
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKAKPVVREKI--HHQI-NYHGFELLLFL 312
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 6e-06
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 598 TLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHG 650
T+A+GDGAND+ M+ A +G+ + L+ D S+ +L +LF+ G
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIAFNAKPALREVA--DASL-SHPYLDTVLFLLG 391
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 8e-06
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 598 TLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFV 648
TL +GDGAND++M + AH+ + + E L+ + I L + +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIAFNAKEVLKQHA--THCI-NEPDLALIKPL 208
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 6/95 (6%)
Query: 524 ELKHRTALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQK 583
L+ R + L T ++ L L H+L + + + + Q
Sbjct: 80 WLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKL--EIDDSDRVVGYQLRQKDPKRQS 137
Query: 584 AEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGV 618
+ +A GD ND M+ +AH G+
Sbjct: 138 VIAFKS----LYYRVIAAGDSYNDTTMLSEAHAGI 168
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1045 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 99.93 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 99.92 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 99.92 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 99.88 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 99.87 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.86 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.8 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.79 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.62 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.46 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.44 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.42 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 99.1 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.95 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.93 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.41 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 97.81 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 97.71 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 97.66 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 97.63 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 97.52 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 97.42 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 97.21 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 97.05 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 96.79 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 96.79 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 96.53 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 96.43 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 96.42 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 96.33 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 96.33 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 96.21 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 96.19 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 95.86 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 95.86 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 95.78 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 94.69 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 95.61 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 95.5 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 95.5 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 95.36 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 95.33 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 95.3 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 95.17 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 95.1 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 95.0 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 94.85 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 94.77 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 94.5 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 94.08 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 94.06 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 94.04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 93.81 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 93.8 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 93.76 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 93.74 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 93.59 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 93.45 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 92.98 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 92.56 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 92.45 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 91.6 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 91.54 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 90.13 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 89.77 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 89.7 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 89.48 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 89.33 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 88.9 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 87.54 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 87.25 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 87.04 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 86.48 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 86.2 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 85.99 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 85.72 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 85.48 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 85.07 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 84.75 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 84.61 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 84.57 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 84.37 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 84.37 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 84.27 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 84.09 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 83.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 83.55 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 81.61 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 81.31 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 81.22 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 80.98 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 80.84 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 80.71 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 80.35 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 80.25 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 80.23 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 80.1 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 80.06 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 80.01 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-79 Score=777.84 Aligned_cols=633 Identities=18% Similarity=0.211 Sum_probs=492.4
Q ss_pred CCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccC-----CcchhhhHHHHHHHHHHHHHHHH
Q psy15803 53 SCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTG-----RYTTLIPLILIMVVSGIKEIIED 127 (1045)
Q Consensus 53 ~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~-----~~~~~~~l~~i~~i~~i~~~~~~ 127 (1045)
..+||.|.++++|+.. +++.|++||+++++++|++++++++++.+.+.+ .|.+.+.++++++++++...+++
T Consensus 34 ~~~~G~N~l~~~~~~~---~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~qe 110 (995)
T 3ar4_A 34 LEKYGHNELPAEEGKS---LWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQE 110 (995)
T ss_dssp HHHHCCSSCCCCCCCC---HHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCccCCCCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHHHHHH
Confidence 4689999999987643 347789999999999999999999887654422 45566777788888999999999
Q ss_pred HHHhhhhh---hhcccEEEEEECCe--EEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccE
Q psy15803 128 IKRHLADG---EINHRSVDVIRNGM--IYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLK 202 (1045)
Q Consensus 128 ~~~~~~~~---~~n~~~~~V~r~g~--~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~ 202 (1045)
++..++.+ ++.+.+++|+|||+ .++|+++||+|||||.|++||+|||||+|++++. |.|+||||+|||||+|+
T Consensus 111 ~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTGES~pv 188 (995)
T 3ar4_A 111 RNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSV 188 (995)
T ss_dssp HHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHCCCSCE
T ss_pred HHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEcccccCCCcce
Confidence 98877654 45667899999887 6999999999999999999999999999987654 45999999999999999
Q ss_pred eecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcch
Q psy15803 203 VRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSK 282 (1045)
Q Consensus 203 ~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~ 282 (1045)
.|.+++... + ...+.+.+|++++||.+.++ ++.++|++||.+|+
T Consensus 189 ~K~~~~~~~-------------------~----------------~~~~~~~~~~v~~GT~v~~G-~~~~~V~~tG~~T~ 232 (995)
T 3ar4_A 189 IKHTEPVPD-------------------P----------------RAVNQDKKNMLFSGTNIAAG-KALGIVATTGVSTE 232 (995)
T ss_dssp EECCSCCCC-------------------T----------------TCCGGGCTTEECTTCEEEEC-EEEEEEEECGGGSH
T ss_pred eccccccCC-------------------c----------------ccCcccccceEecCCEEEcc-eEEEEEEEcCcchH
Confidence 998764310 0 01234566788888888875 48999999999999
Q ss_pred hhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-CCCCccccCCCchhhhHHHHHHHHhhcc
Q psy15803 283 LMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGR-NAGDWYLLSRNPSFHSNLLTFIILYNNL 358 (1045)
Q Consensus 283 ~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 358 (1045)
+|++.+ .++.+++++++.+++++.++.++++++++++++++..+.... ...+|+ ..+...|..++++++++
T Consensus 233 ~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ai~l~v~a 307 (995)
T 3ar4_A 233 IGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWI-----RGAIYYFKIAVALAVAA 307 (995)
T ss_dssp HHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHH-----HHHHHHHHHHHHHHHHh
Confidence 988765 678889999999999999999998888888776654321110 111232 12334567889999999
Q ss_pred ccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccC-
Q psy15803 359 IPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVP- 437 (1045)
Q Consensus 359 iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~- 437 (1045)
|||+||+++++++++++.++ +++++++|+++++|+||++++||||||||||+|+|+|+++++.+..++.
T Consensus 308 iP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 377 (995)
T 3ar4_A 308 IPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDF 377 (995)
T ss_dssp SCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTE
T ss_pred cCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcc
Confidence 99999999999999999988 7789999999999999999999999999999999999999876432210
Q ss_pred ----------C-CCCc-hhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecC----------C----------------
Q psy15803 438 ----------N-FNSN-NVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVA----------G---------------- 479 (1045)
Q Consensus 438 ----------~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~----------~---------------- 479 (1045)
. ..+. ...... ........+...++..++++||+..... +
T Consensus 378 ~~~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~ 455 (995)
T 3ar4_A 378 CSLNEFSITGSTYAPEGEVLKND--KPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV 455 (995)
T ss_dssp EEEEEEEECCSSSSSCCCEEETT--EECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCT
T ss_pred cccceeeccCCCcCCcccccccc--ccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCC
Confidence 0 0000 000000 0000011244566777778887653210 0
Q ss_pred --------------------------ceeecccCCCCcccceEEEEecCCC-----C-----------------------
Q psy15803 480 --------------------------NILVPNFNSNNVKEQSRMIARNPSI-----E----------------------- 505 (1045)
Q Consensus 480 --------------------------~~l~~~f~~~~~~~~~svi~~~~~~-----~----------------------- 505 (1045)
.+-.+||+|+| |||+++++.+.+ +
T Consensus 456 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~r--k~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 533 (995)
T 3ar4_A 456 FNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDR--KSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGT 533 (995)
T ss_dssp TCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTT--TEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETT
T ss_pred ccccccccccccccccchhhhhhhCceEEEeecCCCC--CeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCC
Confidence 01146899999 999998864333 0
Q ss_pred ---------------------------------------------------------------------chhHHHHHHHH
Q psy15803 506 ---------------------------------------------------------------------PVVREFLTMLA 516 (1045)
Q Consensus 506 ---------------------------------------------------------------------~~~~~~~~ti~ 516 (1045)
+++++.+++|+
T Consensus 534 ~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~ 613 (995)
T 3ar4_A 534 TRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQ 613 (995)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHH
Confidence 12223345566
Q ss_pred HHHHHhhhhhhHH--------HHHHHcCCCCCCc---eEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHH
Q psy15803 517 VCHTVYIELKHRT--------ALASLLGTTNNNY---ALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAE 585 (1045)
Q Consensus 517 ~~~~~~~~~~~~~--------~~~~~lG~~~~~~---~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~ 585 (1045)
.++++|+++.|.| ++++.+|+..... ..+++|++++.+.++++.+.+.+ ..+|||++|+||.+
T Consensus 614 ~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~------~~v~~r~~P~~K~~ 687 (995)
T 3ar4_A 614 LCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRR------ACCFARVEPSHKSK 687 (995)
T ss_dssp HHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHH------CCEEESCCSSHHHH
T ss_pred HHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhh------CcEEEEeCHHHHHH
Confidence 6666666644433 5588888865332 35889998887766655554433 45999999999999
Q ss_pred HHHHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhhee
Q psy15803 586 VVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYS 664 (1045)
Q Consensus 586 iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~ 664 (1045)
+|+.+|+. |+.|+|+|||+||+|||++|||||++ +|++.+++++|.++.+++|..+.+++ .|||++|+|+++++.|.
T Consensus 688 ~v~~l~~~-g~~v~~~GDG~ND~~alk~Advgiamg~g~~~ak~aAd~vl~~~~~~~i~~~i-~~GR~~~~~i~k~i~~~ 765 (995)
T 3ar4_A 688 IVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV-EEGRAIYNNMKQFIRYL 765 (995)
T ss_dssp HHHHHHTT-TCCEEEEECSGGGHHHHHHSTEEEEETTSCHHHHHTCSEEETTCCHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHC-CCEEEEEcCCchhHHHHHHCCeEEEeCCCCHHHHHhCCEEECCCCHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 99999999 89999999999999999999999977 78999999999999999999999998 99999999999999999
Q ss_pred ehhhHHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHHH
Q psy15803 665 FYKNICLYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIW 744 (1045)
Q Consensus 665 ~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~ 744 (1045)
+++|+...++.++++++..+ .++.++|++|+|+++|++|++++|+.+++. +.+.+.|+ .++.++++.+.|+.|
T Consensus 766 l~~Ni~~~~~~~~~~~~g~~---~pl~~~qil~~nl~~d~~p~l~l~~~~~~~--~~m~~~P~--~~~~~l~~~~~~~~~ 838 (995)
T 3ar4_A 766 ISSNVGEVVCIFLTAALGLP---EALIPVQLLWVNLVTDGLPATALGFNPPDL--DIMDRPPR--SPKEPLISGWLFFRY 838 (995)
T ss_dssp HHHHHHHHHHHHHHHHTTCC---CSSCHHHHHHHHHTTTHHHHHHHTTCCCCT--TGGGSCCC--CTTCCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCc---chHHHHHHHHHHHHHHHHHHHhhccCCCCh--hHHhCCCC--CCcccccCHHHHHHH
Confidence 99999998888888876432 578899999999999999999999877653 45555565 356789999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy15803 745 IGNALFHSMLMFWIPM 760 (1045)
Q Consensus 745 ~~~~~~~s~~~~~~~~ 760 (1045)
++.|+++++++|+..+
T Consensus 839 ~~~g~~~~~~~~~~~~ 854 (995)
T 3ar4_A 839 MAIGGYVGAATVGAAA 854 (995)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988765433
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-78 Score=767.58 Aligned_cols=622 Identities=19% Similarity=0.200 Sum_probs=492.1
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhcccc--------ccccCCcchhhhHHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPD--------VSPTGRYTTLIPLILIMVVSGIKE 123 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~--------~~~~~~~~~~~~l~~i~~i~~i~~ 123 (1045)
+..+||.|.++..|... +++.|++||+++++++++++++++++.. +...+.+..++++++++++++++.
T Consensus 81 rl~~~G~N~l~~~~~~~---~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~ 157 (1034)
T 3ixz_A 81 LLLRDGPNALRPPRGTP---EYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFG 157 (1034)
T ss_pred HHHhhCCCCCCCCCCCC---HHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHH
Confidence 44789999999887755 4577899999999999999988886632 111234677889999999999999
Q ss_pred HHHHHHHhhhhhhhc---ccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccc
Q psy15803 124 IIEDIKRHLADGEIN---HRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETN 200 (1045)
Q Consensus 124 ~~~~~~~~~~~~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~ 200 (1045)
++|++|++++.+.++ +.+++|+|||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+|||||.
T Consensus 158 ~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTGES~ 233 (1034)
T 3ixz_A 158 YYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTGESE 233 (1034)
T ss_pred HHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCCCCC
Confidence 999999999876654 567999999999999999999999999999999999999999876 8899999999999
Q ss_pred cEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCc
Q psy15803 201 LKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPD 280 (1045)
Q Consensus 201 p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~ 280 (1045)
|+.|.+.+...... ......|+||.+.+|. +.|+|++||.+
T Consensus 234 pv~K~~~~~~~~~~-----------------~~~n~~f~GT~v~~G~----------------------~~~vVv~tG~~ 274 (1034)
T 3ixz_A 234 PQTRSPECTHESPL-----------------ETRNIAFFSTMCLEGT----------------------AQGLVVNTGDR 274 (1034)
T ss_pred CeeccCCCcccccc-----------------ccccceecceeEEeec----------------------ceEEEEeehhh
Confidence 99998764321100 1112237777777776 68999999999
Q ss_pred chhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhc
Q psy15803 281 SKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNN 357 (1045)
Q Consensus 281 T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~ 357 (1045)
|.+|++.+ ..+.+++++++.++++..++..++++++++.++++.++. .++...+..++++++.
T Consensus 275 T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~i~l~v~ 340 (1034)
T 3ixz_A 275 TIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG--------------YTFLRAMVFFMAIVVA 340 (1034)
T ss_pred hHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------chHHHHHHHHHHHHHh
Confidence 98888765 567788999999999999999988888887777654431 2455688899999999
Q ss_pred cccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccC
Q psy15803 358 LIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVP 437 (1045)
Q Consensus 358 ~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~ 437 (1045)
+||++||+++++++++++.++ +++++++|+++++|+||++++||||||||||+|+|+|+++++++..+..
T Consensus 341 ~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~ 410 (1034)
T 3ixz_A 341 YVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSA 410 (1034)
T ss_pred eeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccc
Confidence 999999999999999999998 8899999999999999999999999999999999999999998766543
Q ss_pred CCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCC--------------------------------------
Q psy15803 438 NFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAG-------------------------------------- 479 (1045)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~-------------------------------------- 479 (1045)
+...... . .......+....+..++++||+.....+
T Consensus 411 ~~~~~~~--~----~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~ 484 (1034)
T 3ixz_A 411 DTTEDQS--G----QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERF 484 (1034)
T ss_pred cCccccc--c----cccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhC
Confidence 2111000 0 0000113445567777778876543210
Q ss_pred -ceeecccCCCCcccceEEEEec---------------------------------------------------------
Q psy15803 480 -NILVPNFNSNNVKEQSRMIARN--------------------------------------------------------- 501 (1045)
Q Consensus 480 -~~l~~~f~~~~~~~~~svi~~~--------------------------------------------------------- 501 (1045)
.+-.+||++++ |+|+.+...
T Consensus 485 ~~~~~~pF~s~r--k~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~Rv 562 (1034)
T 3ixz_A 485 PKVCEIPFNSTN--KFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERV 562 (1034)
T ss_pred cceEEeeecCCC--ceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHh
Confidence 00156788887 776655432
Q ss_pred -------------------------------------CCCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcC
Q psy15803 502 -------------------------------------PSIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLLG 536 (1045)
Q Consensus 502 -------------------------------------~~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG 536 (1045)
...|++|++..++|+.++++|+++.+.| ++++.+|
T Consensus 563 La~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lg 642 (1034)
T 3ixz_A 563 LGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVG 642 (1034)
T ss_pred heEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcC
Confidence 1123455566677777788888755544 4588888
Q ss_pred CCCCC-----------------------ceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhc
Q psy15803 537 TTNNN-----------------------YALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVN 593 (1045)
Q Consensus 537 ~~~~~-----------------------~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~ 593 (1045)
+...+ ...+++|.++..+..+++. +....++.++|||++|+||.++|+.+|+.
T Consensus 643 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~----~~~~~~~~~v~ar~~P~~K~~iv~~lq~~ 718 (1034)
T 3ixz_A 643 IISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELV----EALRTHPEMVFARTSPQQKLVIVESCQRL 718 (1034)
T ss_pred CCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHH----HHHHhCCceEEEecCHHHHHHHHHHHHHc
Confidence 75322 2468899988877665544 34445677899999999999999999998
Q ss_pred CCCEEEEecCCccChHHHHhccccccc--cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHH
Q psy15803 594 TNSVTLAIGDGANDVAMIQKAHVGVGI--SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICL 671 (1045)
Q Consensus 594 ~g~~v~~iGDG~ND~~al~~AdVGigi--~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~ 671 (1045)
|++|+|+|||.||+|||++|||||++ +|+|.+++++|.++.+++|..+..++ .|||++|+|+++++.|.+++|+..
T Consensus 719 -g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai-~~GR~i~~ni~k~i~~~l~~ni~~ 796 (1034)
T 3ixz_A 719 -GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGV-EQGRLIFDNLKKSIAYTLTKNIPE 796 (1034)
T ss_pred -CCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999966 68999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHH-HHHHHHH
Q psy15803 672 YVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWI-WIGNALF 750 (1045)
Q Consensus 672 ~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~-~~~~~~~ 750 (1045)
+++.+++.++.. ..|+.++|++|+|++++.+|+++++.... +..+|+.|+...++.++++.+.++. ++..|++
T Consensus 797 ~~~~~~~~~~~~---~~pl~~~qiL~inl~~d~~palal~~e~~---~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~ 870 (1034)
T 3ixz_A 797 LTPYLIYITVSV---PLPLGCITILFIELCTDIFPSVSLAYEKA---ESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAI 870 (1034)
T ss_pred HHHHHHHHHHhh---hhhHHHHHHHHHHHHHHHHHHHHhhcCCC---ChhhhhCCCCCCccccccCHHHHHHHHHHHHHH
Confidence 999999888753 36799999999999999999999986443 3445655543223567888887765 5567899
Q ss_pred HHHHHHHHhhhhc
Q psy15803 751 HSMLMFWIPMLIY 763 (1045)
Q Consensus 751 ~s~~~~~~~~~~~ 763 (1045)
++++.|+..++.+
T Consensus 871 ~~~~~~~~~~~~~ 883 (1034)
T 3ixz_A 871 QSFAGFTDYFTAM 883 (1034)
T ss_pred HHHHHHHHHHHHH
Confidence 8887777666554
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-78 Score=772.52 Aligned_cols=621 Identities=20% Similarity=0.207 Sum_probs=494.7
Q ss_pred CCCCCCCceeccCC-CcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccc-c-------ccCCcchhhhHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAK-YSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDV-S-------PTGRYTTLIPLILIMVVSGIK 122 (1045)
Q Consensus 52 ~~~~~~~N~i~t~k-y~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~-~-------~~~~~~~~~~l~~i~~i~~i~ 122 (1045)
+..+||.|.++..| .++ ++.|++||+++++++++++++++++... . ..+.+..+++++++++++++.
T Consensus 76 r~~~~G~N~l~~~~~~~~----~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~ 151 (1028)
T 2zxe_A 76 ILARDGPNSLTPPPTTPE----WIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCF 151 (1028)
T ss_dssp HHHHHCCSCCCCCCCCCH----HHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCCCCCCH----HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 45789999999875 454 3567899999999999999999876421 1 012456778899999999999
Q ss_pred HHHHHHHHhhhhhhh---cccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCccc
Q psy15803 123 EIIEDIKRHLADGEI---NHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGET 199 (1045)
Q Consensus 123 ~~~~~~~~~~~~~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs 199 (1045)
+++|++|++++.+.+ .+.+++|+|||++++|++++|+|||||.|++||+|||||+|+++++ |+||||+|||||
T Consensus 152 ~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTGES 227 (1028)
T 2zxe_A 152 SYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTGES 227 (1028)
T ss_dssp HHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCCCC
Confidence 999999888877554 5678999999999999999999999999999999999999999865 999999999999
Q ss_pred ccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecC
Q psy15803 200 NLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGP 279 (1045)
Q Consensus 200 ~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~ 279 (1045)
+|+.|.+++.. ..|++.+|++++||.+.++ ++.++|++||.
T Consensus 228 ~pv~K~~~~~~--------------------------------------~~~~~~~n~v~~GT~v~~G-~~~~~V~~tG~ 268 (1028)
T 2zxe_A 228 EPQTRSPEFSS--------------------------------------ENPLETRNIAFFSTNCVEG-TARGVVVYTGD 268 (1028)
T ss_dssp SCEECCSSCCC--------------------------------------SSTTTCSSEECTTCEEEEE-EEEEEEEECGG
T ss_pred cceecccCCCC--------------------------------------CCcccccceEEeCceEEcc-eEEEEEEEecc
Confidence 99999876432 1145567788888887765 48999999999
Q ss_pred cchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhh
Q psy15803 280 DSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYN 356 (1045)
Q Consensus 280 ~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~ 356 (1045)
+|++|++.+ .++.+++++++.+++++.+++++++++++++++++.+.. . ++...+..++++++
T Consensus 269 ~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-----~---------~~~~~~~~~i~llv 334 (1028)
T 2zxe_A 269 RTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-----Y---------SWLEAVIFLIGIIV 334 (1028)
T ss_dssp GSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----C---------CHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----C---------cHHHHHHHHHHHHH
Confidence 998888765 678889999999999999999999988888877654321 1 23457778888999
Q ss_pred ccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCcccc
Q psy15803 357 NLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILV 436 (1045)
Q Consensus 357 ~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~ 436 (1045)
++|||+||+++++++++++.++ +++++++|+++++|+||++++||||||||||+|+|+|+++++.+..|.
T Consensus 335 ~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 404 (1028)
T 2zxe_A 335 ANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHE 404 (1028)
T ss_dssp HHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEE
T ss_pred HHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeee
Confidence 9999999999999999999998 789999999999999999999999999999999999999998876553
Q ss_pred CCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCC-------------------------------------
Q psy15803 437 PNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAG------------------------------------- 479 (1045)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~------------------------------------- 479 (1045)
.+...... . .......+....++.++++||+...+.+
T Consensus 405 ~~~~~~~~--~----~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~ 478 (1028)
T 2zxe_A 405 ADTTENQS--G----AAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDR 478 (1028)
T ss_dssp CCCCTTCC--S----CCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred ccCCCCcc--c----cccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHh
Confidence 21110000 0 0000012344556667777775543210
Q ss_pred --ceeecccCCCCcccceEEEEecC-------------------------------------------------------
Q psy15803 480 --NILVPNFNSNNVKEQSRMIARNP------------------------------------------------------- 502 (1045)
Q Consensus 480 --~~l~~~f~~~~~~~~~svi~~~~------------------------------------------------------- 502 (1045)
.+-.+||+|+| |+|+++++.+
T Consensus 479 ~~~~~~~pF~s~r--k~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~R 556 (1028)
T 2zxe_A 479 NPKIVEIPFNSTN--KYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGER 556 (1028)
T ss_dssp SCEEEEECCCTTT--CEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CceEEEeccCccc--ceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCE
Confidence 01146888888 8888776531
Q ss_pred ---------------------------------------CCCchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHc
Q psy15803 503 ---------------------------------------SIEPVVREFLTMLAVCHTVYIELKHRT--------ALASLL 535 (1045)
Q Consensus 503 ---------------------------------------~~~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~l 535 (1045)
..|++|++.+++|+.++++|+++.|.| ++++.+
T Consensus 557 vL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l 636 (1028)
T 2zxe_A 557 VLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV 636 (1028)
T ss_dssp EEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred EEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc
Confidence 112455566778888888888865554 568899
Q ss_pred CCCCCC-----------------------ceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHh
Q psy15803 536 GTTNNN-----------------------YALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTV 592 (1045)
Q Consensus 536 G~~~~~-----------------------~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~ 592 (1045)
|+...+ ...+++|+++..+.+++++ ++...++.++|||++|+||..+|+.+|+
T Consensus 637 gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~----~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 712 (1028)
T 2zxe_A 637 GIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD----DILHYHTEIVFARTSPQQKLIIVEGCQR 712 (1028)
T ss_dssp TSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHH----HHHHHCSEEEEESCCHHHHHHHHHHHHH
T ss_pred CCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHH----HHHhhCCcEEEEEcCHHHHHHHHHHHHh
Confidence 986432 2578999998877655544 4445677789999999999999999999
Q ss_pred cCCCEEEEecCCccChHHHHhccccccc--cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHH
Q psy15803 593 NTNSVTLAIGDGANDVAMIQKAHVGVGI--SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNIC 670 (1045)
Q Consensus 593 ~~g~~v~~iGDG~ND~~al~~AdVGigi--~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~ 670 (1045)
. |++|+|+|||+||+|||++|||||++ +|+|++++++|.++.+++|..|.+++ .|||++|+|+++++.|.+++|+.
T Consensus 713 ~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i-~~gR~i~~ni~k~i~~~l~~n~~ 790 (1028)
T 2zxe_A 713 Q-GAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGV-EEGRLIFDNLKKSIAYTLTSNIP 790 (1028)
T ss_dssp T-TCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHH-HHHHHHHHHHHHHHHHHHHTTHH
T ss_pred C-CCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 89999999999999999999999965 58999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHH-HHHHHH
Q psy15803 671 LYVMELWFAIYSGWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWI-WIGNAL 749 (1045)
Q Consensus 671 ~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~-~~~~~~ 749 (1045)
.+++.+++.++... .++.+++++|+|++++.+|+++++. |+. .++.+.+.|+ ..+.+++++.+.++. |+..|+
T Consensus 791 ~~~~~~~~~~~~~~---~~l~~~qil~inl~~d~~pa~al~~-e~~-~~~~m~~~Pr-~~~~~~l~~~~~~~~~~~~~g~ 864 (1028)
T 2zxe_A 791 EITPFLVFIIGNVP---LPLGTVTILCIDLGTDMVPAISLAY-EQA-ESDIMKRQPR-NPKTDKLVNERLISMAYGQIGM 864 (1028)
T ss_dssp HHHHHHHHHHHCCC---CSSCHHHHHHHHTTTTHHHHHHGGG-CCC-SSCGGGSCCC-CTTTCCSSCHHHHHHHTTTHHH
T ss_pred HHHHHHHHHHHccc---chhHHHHHHHHHHHHHHHHHHHhcc-Ccc-chhhhccCCC-CcccccccCHHHHHHHHHHHHH
Confidence 99888888777543 5688999999999999999999984 443 2334444453 234458999998876 678899
Q ss_pred HHHHHHHHHhhhhc
Q psy15803 750 FHSMLMFWIPMLIY 763 (1045)
Q Consensus 750 ~~s~~~~~~~~~~~ 763 (1045)
+++++.|+..++.+
T Consensus 865 ~~~~~~~~~~~~~~ 878 (1028)
T 2zxe_A 865 IQALGGFFSYFVIL 878 (1028)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99998887666543
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-75 Score=723.97 Aligned_cols=558 Identities=16% Similarity=0.204 Sum_probs=435.4
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhccccccccCCcchhhhHHHHHHHHHHHHHHHHHHHh
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPTGRYTTLIPLILIMVVSGIKEIIEDIKRH 131 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~~~~~~~~~l~~i~~i~~i~~~~~~~~~~ 131 (1045)
+..+||.|.++..|+++|. .|++||.++++++++++++++++ .+.|.++..++++++++++.+++++++++
T Consensus 96 r~~~~G~N~l~~~~~~~~~----~~l~~f~~~~~~ll~~aai~s~~-----~g~~~~~~~i~~vv~i~~~i~~~qe~~a~ 166 (920)
T 1mhs_A 96 RRRKYGLNQMKEEKENHFL----KFLGFFVGPIQFVMEGAAVLAAG-----LEDWVDFGVICGLLLLNAVVGFVQEFQAG 166 (920)
T ss_dssp HHHHTSSSSCCCCCCSSHH----HHTHHHHHHHHHHHHHHHHHCTT-----CSCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCccCCCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999988764 45789999999999999999888 46777788888889999999999999999
Q ss_pred hhhhhhc---ccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCC
Q psy15803 132 LADGEIN---HRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPN 208 (1045)
Q Consensus 132 ~~~~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~ 208 (1045)
++.+.++ +.+++|+|||++++|++++|+|||+|.|++||+|||||+|+++++ .+.||||+|||||.|+.|.+++
T Consensus 167 ~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~---~l~VDES~LTGES~PV~K~~gd 243 (920)
T 1mhs_A 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA---FLQVDQSALTGESLAVDKHKGD 243 (920)
T ss_dssp HHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS---CCEEBCTTTSSCCCCEECCSSC
T ss_pred HHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCc---eeeeeccccCCCCcceEecCCC
Confidence 9887665 467999999999999999999999999999999999999999862 2699999999999999998865
Q ss_pred CCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc
Q psy15803 209 ETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT 288 (1045)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~ 288 (1045)
.. |+||.+.+|. +.++|++||.+|.+|++.+
T Consensus 244 ~v---------------------------~sGT~v~~G~----------------------~~~~V~~tG~~T~~g~I~~ 274 (920)
T 1mhs_A 244 QV---------------------------FASSAVKRGE----------------------AFVVITATGDNTFVGRAAA 274 (920)
T ss_dssp EE---------------------------CSCBCCSCCC----------------------EEEEEEECSTTCSTTTTTS
T ss_pred ee---------------------------ecCceEecce----------------------EEEEEEEeCCcCHHHHHHH
Confidence 43 8899888887 7899999999999999875
Q ss_pred ---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchhhh
Q psy15803 289 ---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQV 365 (1045)
Q Consensus 289 ---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v 365 (1045)
.++.+++++++.++++..++++++++++++.++.+.+ ...++...+..++++++.+|||+||+
T Consensus 275 lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~--------------~~~~~~~~l~~av~llV~aiP~aLp~ 340 (920)
T 1mhs_A 275 LVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY--------------RSNPIVQILEFTLAITIIGVPVGLPA 340 (920)
T ss_dssp SCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT--------------TTCCHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------cCCcHHHHHHHHHHHHHHhCchhHHH
Confidence 5567789999999999998888777777665543211 01235567888999999999999999
Q ss_pred hHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCchhH
Q psy15803 366 TLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQ 445 (1045)
Q Consensus 366 ~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~ 445 (1045)
+++++.++++.++ +++++++|+++.+|+||++++||||||||||+|+|+|++++..+. .....+.
T Consensus 341 ~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-----~~~~~ll 405 (920)
T 1mhs_A 341 VVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-----VDPEDLM 405 (920)
T ss_dssp HHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-----CCCTHHH
T ss_pred HHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-----CCHHHHH
Confidence 9999999999998 778999999999999999999999999999999999998764321 1122222
Q ss_pred hhhhhhcCCCCc--hHHHHHHHHHHhhceee---eecCCceeecccCCCCcccceEEEEec-------------------
Q psy15803 446 EQSRMIARNPSI--EPVVREFLTMLAVCHTV---CSVAGNILVPNFNSNNVKEQSRMIARN------------------- 501 (1045)
Q Consensus 446 ~~~~~~~~~~~~--~~~~~~~~~~l~~c~~v---~~~~~~~l~~~f~~~~~~~~~svi~~~------------------- 501 (1045)
....+....... +|....++..+...... .......-..||++.+ |+|++++..
T Consensus 406 ~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~--k~ms~iv~~~~g~~~~~~KGape~il~~ 483 (920)
T 1mhs_A 406 LTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVS--KKVVAVVESPQGERITCVKGAPLFVLKT 483 (920)
T ss_dssp HHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTT--TEEEEEECCSSSSCEEEEEECHHHHHHH
T ss_pred HHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCC--CeEEEEEEeCCCcEEEEEeCCHHHHHHh
Confidence 221111111111 34444444332211100 0000111245677777 777665532
Q ss_pred -----------------------------------------------CCCCchhHHHHHHHHHHHHHhhhhhhHH-----
Q psy15803 502 -----------------------------------------------PSIEPVVREFLTMLAVCHTVYIELKHRT----- 529 (1045)
Q Consensus 502 -----------------------------------------------~~~~~~~~~~~~ti~~~~~~~~~~~~~~----- 529 (1045)
...|++|++.+++|+.|+++|+++.|.|
T Consensus 484 c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~ 563 (920)
T 1mhs_A 484 VEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVG 563 (920)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHH
Confidence 1124677788889999999999977665
Q ss_pred ---HHHHHcCCCCC---CceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecC
Q psy15803 530 ---ALASLLGTTNN---NYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGD 603 (1045)
Q Consensus 530 ---~~~~~lG~~~~---~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGD 603 (1045)
++|+.+|+... ...++++|+ +.+.++++.+.+ .+..||||++|+||.++|+.+|+. |++|+|+||
T Consensus 564 TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~------~~~~V~arv~P~~K~~iV~~Lq~~-g~~Vam~GD 634 (920)
T 1mhs_A 564 IARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFV------EAADGFAEVFPQHKYNVVEILQQR-GYLVAMTGD 634 (920)
T ss_dssp HHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTT------TTTSCEESCCSTHHHHHHHHHHTT-TCCCEECCC
T ss_pred HHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHH------hhCeEEEEeCHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 66999998641 123345554 223333333222 124599999999999999999998 899999999
Q ss_pred CccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHh
Q psy15803 604 GANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYS 682 (1045)
Q Consensus 604 G~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~ 682 (1045)
|+||+|||++|||||++ +|+|.+++++|+++.+++|+.|.+++ .+||++|+|+++++.|.++.|+.+.+...++..+.
T Consensus 635 GvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai-~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~ 713 (920)
T 1mhs_A 635 GVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDAL-KTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL 713 (920)
T ss_dssp CGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999977 58899999999999999999999998 99999999999999999999998755555445555
Q ss_pred CCCcchhhhhHHHHHHHHHhhhhhhhhhhccccc
Q psy15803 683 GWSGQVLFERWTIGLYNVLFTAFPPLAIGILDQV 716 (1045)
Q Consensus 683 ~~s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d 716 (1045)
+++ +.+.+++|.|++.+. |++++++...+
T Consensus 714 ~~~----l~~~~il~~~l~~d~-~~lal~~e~~~ 742 (920)
T 1mhs_A 714 NRS----LNIELVVFIAIFADV-ATLAIAYDNAP 742 (920)
T ss_dssp SCC----CCHHHHHHHHHHHTT-HHHHCCCCCSG
T ss_pred hcc----CCHHHHHHHHHHHHH-HhhhhcccCcc
Confidence 554 567788888888776 99999876654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-74 Score=711.30 Aligned_cols=605 Identities=17% Similarity=0.191 Sum_probs=435.9
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhcccccc--ccCCcchhhhHHHHHHHHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVS--PTGRYTTLIPLILIMVVSGIKEIIEDIK 129 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~--~~~~~~~~~~l~~i~~i~~i~~~~~~~~ 129 (1045)
+..+||.|.++.+|+++|.. |++||.++++++++++++++++.... ....|..++.++++++++++.+++++++
T Consensus 41 r~~~~G~N~l~~~~~~~~~~----~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~k 116 (885)
T 3b8c_A 41 RIQIFGPNKLEEKKESKLLK----FLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENN 116 (885)
T ss_dssp HSSSCCSCCTTTTCCCTTSS----TTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTT
T ss_pred HHHhcCCCccCCCCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999887644 46899999999999999998875321 1125667778888888899999999999
Q ss_pred Hhhhhhhh---cccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecC
Q psy15803 130 RHLADGEI---NHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQA 206 (1045)
Q Consensus 130 ~~~~~~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~ 206 (1045)
+.++.+.+ .+.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ +.||||+|||||.|+.|.+
T Consensus 117 a~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~K~~ 192 (885)
T 3b8c_A 117 AGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVTKHP 192 (885)
T ss_dssp TTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCCBSS
T ss_pred HHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcceEecC
Confidence 88877655 5667999999999999999999999999999999999999999775 6899999999999999988
Q ss_pred CCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhh
Q psy15803 207 PNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKN 286 (1045)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~ 286 (1045)
++.. |+||.+.+|. +.++|++||.+|.+|++
T Consensus 193 g~~v---------------------------~~GT~v~~G~----------------------~~~~V~~tG~~T~~g~i 223 (885)
T 3b8c_A 193 GQEV---------------------------FSGSTCKQGE----------------------IEAVVIATGVHTFFGKA 223 (885)
T ss_dssp CCCC---------------------------CSCCCCCSCC----------------------CCCBCCSCTTTTTSTTC
T ss_pred CCcc---------------------------ccCeEEeeeE----------------------EEEEEEEcCcccHHHHH
Confidence 7554 8899888887 57999999999999997
Q ss_pred cc--CCCCCCChHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhcCCCCCCccccCCCchhhhHHHHHHHHhhccccchh
Q psy15803 287 AT--SAPLKRSTVDKITNTQTIMLFVL-LLALCFISAAASTIWTLGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISL 363 (1045)
Q Consensus 287 ~~--~~~~k~s~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L 363 (1045)
.+ ....+++++++.++++..+++.. ++++++++++.+.+. . .++...+..++++++++|||+|
T Consensus 224 ~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~---------~~~~~~~~~~v~llv~aiP~aL 289 (885)
T 3b8c_A 224 AHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQ-----R---------RKYRDGIDNLLVLLIGGIPIAM 289 (885)
T ss_dssp CCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTT-----C---------SCSTTHHHHHHHHTTTTCCSST
T ss_pred HHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----c---------CcHHHHHHHHHHHHHHHhhhHH
Confidence 76 22567789999999998764432 222333222221110 0 1233478899999999999999
Q ss_pred hhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCch
Q psy15803 364 QVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNN 443 (1045)
Q Consensus 364 ~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~ 443 (1045)
|++++++.++++.++ +++++++|+++.+|+||++++||||||||||+|+|+|.++.+. .+........
T Consensus 290 p~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~~~~~~ 357 (885)
T 3b8c_A 290 PTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKGVEKDQ 357 (885)
T ss_dssp TTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSSTTHHH
T ss_pred HHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCCCCHHH
Confidence 999999999999988 8899999999999999999999999999999999999753311 1111111122
Q ss_pred hHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCCceeecccCCCC---------------------------------
Q psy15803 444 VQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAGNILVPNFNSNN--------------------------------- 490 (1045)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~~~l~~~f~~~~--------------------------------- 490 (1045)
+.......+.....++....+......-.........+-.+||++.+
T Consensus 358 ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~ 437 (885)
T 3b8c_A 358 VLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASN 437 (885)
T ss_dssp HHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCS
T ss_pred HHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCch
Confidence 22221111111111333333332221000000000000011222221
Q ss_pred -------------cccceEEE----------------------EecCCCCchhHHHHHHHHHHHHHhhhhhhHH------
Q psy15803 491 -------------VKEQSRMI----------------------ARNPSIEPVVREFLTMLAVCHTVYIELKHRT------ 529 (1045)
Q Consensus 491 -------------~~~~~svi----------------------~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~------ 529 (1045)
..+.+.++ +.....|++|++.+++|+.|+++|+++.|.|
T Consensus 438 ~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~t 517 (885)
T 3b8c_A 438 DLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 517 (885)
T ss_dssp TTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHH
T ss_pred hhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHH
Confidence 00122222 2222246889999999999999999977765
Q ss_pred --HHHHHcCCCCCC-ceEEEechhhHH-HhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCc
Q psy15803 530 --ALASLLGTTNNN-YALIIDGLALDY-ALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGA 605 (1045)
Q Consensus 530 --~~~~~lG~~~~~-~~~vi~G~~l~~-~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ 605 (1045)
++++.+|+..+. ...+++|.+++. +.+.++.+.+. +..||+|++|+||.++|+.+|+. |++|+|+|||+
T Consensus 518 A~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~------~~~v~arv~P~~K~~iV~~lq~~-g~~Vam~GDGv 590 (885)
T 3b8c_A 518 GKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIE------KADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGV 590 (885)
T ss_dssp HTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHH------TSCCEECCCHHHHHHHHHHHHHT-TCCCCBCCCSS
T ss_pred HHHHHHHhCCccccCCcceeeccccccccchhHHHHHHh------hCcEEEEECHHHHHHHHHHHHHC-CCeEEEEcCCc
Confidence 669999986421 112456766654 22223333322 23499999999999999999998 89999999999
Q ss_pred cChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHHHhCC
Q psy15803 606 NDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAIYSGW 684 (1045)
Q Consensus 606 ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~ 684 (1045)
||+|||++|||||++ +|+|.+++++|+++.+++|+.+.+++ .+||++|+|+++++.|.+..|+...+..++..+ ++
T Consensus 591 NDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai-~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~ 667 (885)
T 3b8c_A 591 NDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IW 667 (885)
T ss_dssp TTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHH-HTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SC
T ss_pred hhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cc
Confidence 999999999999977 58899999999999999999999999 899999999999999999999976555554444 33
Q ss_pred CcchhhhhHHHHHHHHHhhhhhhhhhhcccccCChhhhhcCCcccccccCcccHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy15803 685 SGQVLFERWTIGLYNVLFTAFPPLAIGILDQVCSARTRLKYPILYSQTANTFNVKIFWIWIGNALFHSMLMFWIPMLIY 763 (1045)
Q Consensus 685 s~~~~~~~~~l~~~n~~~t~~p~~~~~~~~~d~~~~~~~~~p~ly~~~~~~~~~~~f~~~~~~~~~~s~~~~~~~~~~~ 763 (1045)
+ .++.+++++|+|++.+..| ++++. |+..+ -+.|+ .....+.|+.+++.|++.+++.++..++.+
T Consensus 668 ~--~~l~p~~il~i~l~~d~~~-l~l~~-~~~~~----~~~p~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 732 (885)
T 3b8c_A 668 E--FDFSAFMVLIIAILNDGTI-MTISK-DRVKP----SPTPD------SWKLKEIFATGVVLGGYQAIMTVIFFWAAH 732 (885)
T ss_dssp S--SCSCHHHHHHHHHHHHTTT-CCCCC-CCCCC----SSCCC------STTTTTTTTTHHHHHSSTHHHHTTSSSCTT
T ss_pred C--cCcCHHHHHHHHHHHHHHH-Hhhcc-cccCc----ccCCc------chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3578899999999998876 56553 22111 01221 111133455677888888888776554443
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-61 Score=589.03 Aligned_cols=450 Identities=15% Similarity=0.212 Sum_probs=347.1
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhhhhhh---hcccEEEEEE-CCeEEEEeecccccCeEEEecCCCccceeEEEEee
Q psy15803 106 YTTLIPLILIMVVSGIKEIIEDIKRHLADGE---INHRSVDVIR-NGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLST 181 (1045)
Q Consensus 106 ~~~~~~l~~i~~i~~i~~~~~~~~~~~~~~~---~n~~~~~V~r-~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~ 181 (1045)
|.++..++++++++.+.+.+...|..++.++ +.+.+++++| ||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 188 fe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 267 (736)
T 3rfu_A 188 FEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEG 267 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEEC
Confidence 3344455566666665555555544444443 3567788888 99999999999999999999999999999999985
Q ss_pred cCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeecc
Q psy15803 182 SENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRG 261 (1045)
Q Consensus 182 s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G 261 (1045)
+ ++||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 268 ~-----~~VDES~LTGES~Pv~K~~gd~v---------------------------~~Gt~~~~G~-------------- 301 (736)
T 3rfu_A 268 R-----SFVDESMVTGEPIPVAKEASAKV---------------------------IGATINQTGS-------------- 301 (736)
T ss_dssp C-----EEEECSSSTTCSSCEEECTTCEE---------------------------CTTCEEESCC--------------
T ss_pred c-----eEeeecccCCccccEEeccCCcC---------------------------CCceEeccce--------------
Confidence 4 89999999999999999998765 8999999988
Q ss_pred ceeecCcEEEEEEEEecCcchhhhhcc---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcccc
Q psy15803 262 SMLRNTAWIIGIVVYTGPDSKLMKNAT---SAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDWYLL 338 (1045)
Q Consensus 262 ~~l~nt~~~~~iV~~tG~~T~~~~~~~---~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 338 (1045)
+.+.|++||.+|.++++.+ .++.+++++++.+++++.++++++++++++++++|.++...
T Consensus 302 --------~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~--------- 364 (736)
T 3rfu_A 302 --------FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQ--------- 364 (736)
T ss_dssp --------CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS---------
T ss_pred --------EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------
Confidence 5799999999998877665 67788899999999999999999999999998887665211
Q ss_pred CCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCCCcc
Q psy15803 339 SRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKTGTL 418 (1045)
Q Consensus 339 ~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTL 418 (1045)
..+...+.+++++++++|||+|+++++++...+..++ +++|+++|+++.+|+||+||+|||||||||
T Consensus 365 ---~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE~l~~v~~i~fDKTGTL 431 (736)
T 3rfu_A 365 ---PALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALERMEKVNTLVVDKTGTL 431 (736)
T ss_dssp ---SSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHHHHTSCCEEEECCBTTT
T ss_pred ---chHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHHHhcCCCEEEEeCCCCC
Confidence 1244588999999999999999999999999999988 789999999999999999999999999999
Q ss_pred ccceEEEEEEEEcCccccCCCCCchhHhhh-hhhcCCCCchHHHHHHHHHHhhc---------------eeee-ecCC-c
Q psy15803 419 TRNVMEFKICSVAGNILVPNFNSNNVQEQS-RMIARNPSIEPVVREFLTMLAVC---------------HTVC-SVAG-N 480 (1045)
Q Consensus 419 T~n~m~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~c---------------~~v~-~~~~-~ 480 (1045)
|+|+|+|.++...+. ...++.... .+... .. ||..+.+....... ..+. ...+ .
T Consensus 432 T~g~~~v~~i~~~~~------~~~~~l~~aa~le~~-s~-hPla~Aiv~~a~~~~~~~~~~~~f~~~~g~gv~~~~~g~~ 503 (736)
T 3rfu_A 432 TEGHPKLTRIVTDDF------VEDNALALAAALEHQ-SE-HPLANAIVHAAKEKGLSLGSVEAFEAPTGKGVVGQVDGHH 503 (736)
T ss_dssp BCSSCEEEEEEESSS------CHHHHHHHHHHHHHS-SC-CHHHHHHHHHHHTTCCCCCCCSCCCCCTTTEEEECSSSSC
T ss_pred cCCceEEEEEEecCC------CHHHHHHHHHHHhhc-CC-ChHHHHHHHHHHhcCCCccCcccccccCCceEEEEECCEE
Confidence 999999999984331 111221111 11111 11 33333333222100 0000 0111 1
Q ss_pred ee------e--------------cccCCCC-----cccceEEEEecCCCCchhHHHHHHHHHHHHHhhhhhhHH------
Q psy15803 481 IL------V--------------PNFNSNN-----VKEQSRMIARNPSIEPVVREFLTMLAVCHTVYIELKHRT------ 529 (1045)
Q Consensus 481 ~l------~--------------~~f~~~~-----~~~~~svi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~------ 529 (1045)
++ . ..+..+. +..+..+++.....|+++++..++++.+++.|+++.+.|
T Consensus 504 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~ 583 (736)
T 3rfu_A 504 VAIGNARLMQEHGGDNAPLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRT 583 (736)
T ss_dssp EEEESHHHHHHHCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHH
T ss_pred EEEcCHHHHHHcCCChhHHHHHHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 10 0 0000010 001112233334467899999999999999998744332
Q ss_pred --HHHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccC
Q psy15803 530 --ALASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGAND 607 (1045)
Q Consensus 530 --~~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND 607 (1045)
.+++.+|++. ++++++|+||.++|+.+|+. |+.|+|+|||.||
T Consensus 584 a~~ia~~lgi~~----------------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND 628 (736)
T 3rfu_A 584 AEAVAGTLGIKK----------------------------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVND 628 (736)
T ss_dssp HHHHHHHHTCCC----------------------------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTT
T ss_pred HHHHHHHcCCCE----------------------------------EEEecCHHHHHHHHHHHHhc-CCEEEEEECChHh
Confidence 3355555543 99999999999999999998 8999999999999
Q ss_pred hHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHH
Q psy15803 608 VAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVME 675 (1045)
Q Consensus 608 ~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 675 (1045)
+|||++|||||++ +|+|.+++++|+++..+++..+.+++ .+||.+++|+++++.|.+.+|++.+...
T Consensus 629 ~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai-~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 629 APALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKAR-RLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp HHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999977 78999999999999999999999999 8999999999999999999999875443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-59 Score=574.49 Aligned_cols=459 Identities=17% Similarity=0.190 Sum_probs=344.8
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhhh---hh---hhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEE
Q psy15803 105 RYTTLIPLILIMVVSGIKEIIEDIKRHLA---DG---EINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMV 178 (1045)
Q Consensus 105 ~~~~~~~l~~i~~i~~i~~~~~~~~~~~~---~~---~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~il 178 (1045)
+|.++..+++++.++ +++|++.++++ .+ ++.+.+++|+|||++++|++++|+|||+|.|++||+|||||+|
T Consensus 173 ~~~~~~~i~~~~~ig---~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~v 249 (723)
T 3j09_A 173 FYETSVLLLAFLLLG---RTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVV 249 (723)
T ss_dssp CCTTHHHHHHHHHHH---HHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEE
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEE
Confidence 344445555555544 45555555544 33 3356789999999999999999999999999999999999999
Q ss_pred EeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCcccee
Q psy15803 179 LSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERIL 258 (1045)
Q Consensus 179 l~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l 258 (1045)
++|+ |+||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 250 l~G~-----~~VdeS~LTGES~pv~K~~g~~v---------------------------~~Gt~~~~g~----------- 286 (723)
T 3j09_A 250 VEGE-----SYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV----------- 286 (723)
T ss_dssp EECC-----EEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-----------
T ss_pred EECC-----eEEecccccCCCcceeecCCCee---------------------------ccceEEecCc-----------
Confidence 9854 99999999999999999887655 8888888887
Q ss_pred eccceeecCcEEEEEEEEecCcchhhhhc---cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCc
Q psy15803 259 LRGSMLRNTAWIIGIVVYTGPDSKLMKNA---TSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDW 335 (1045)
Q Consensus 259 ~~G~~l~nt~~~~~iV~~tG~~T~~~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 335 (1045)
+.+.|++||.+|.++++. +.++.+++++++.+++++.+++++++++++++++.|.++..
T Consensus 287 -----------~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~------- 348 (723)
T 3j09_A 287 -----------LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH------- 348 (723)
T ss_dssp -----------EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTT-------
T ss_pred -----------EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------
Confidence 789999999999777665 47888999999999999999999999998888776543311
Q ss_pred cccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCC
Q psy15803 336 YLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKT 415 (1045)
Q Consensus 336 ~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKT 415 (1045)
.++...+.+++++++++|||+|+++++++...+..++ +++|+++|+++.+|+||++++||||||
T Consensus 349 ------~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~fDKT 412 (723)
T 3j09_A 349 ------APLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVIFDKT 412 (723)
T ss_dssp ------CTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGGGCCEEEEEHH
T ss_pred ------CcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHhhcCCEEEEcCC
Confidence 1234478899999999999999999999999999988 789999999999999999999999999
Q ss_pred CccccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhcee-------eeecCCc------ee
Q psy15803 416 GTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHT-------VCSVAGN------IL 482 (1045)
Q Consensus 416 GTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~-------v~~~~~~------~l 482 (1045)
||||+|+|+|+++...+. ...++.........+.. ||..+.+........- .....+. ++
T Consensus 413 GTLT~g~~~v~~~~~~~~------~~~~~l~~aa~~e~~s~-hP~~~Ai~~~a~~~~~~~~~~~~~~~~~g~g~~~~~~~ 485 (723)
T 3j09_A 413 GTLTKGKPEVTDLVPLNG------DERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGIL 485 (723)
T ss_dssp HHTSCSCCEEEEEEESSS------CHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCCSCCCCEEETTTEEEETTEE
T ss_pred CccccCceEEEEEEeCCC------CHHHHHHHHHHHhccCC-CchhHHHHHHHHhcCCCcCCccceEEecCCceEEEEEE
Confidence 999999999999987642 12222222111122222 4555544443321110 0000010 00
Q ss_pred ------e----cc-----------cCCCC-----cccceEEEEecCCCCchhHHHHHHHHHHHHHhhhhhhHHHHHHHcC
Q psy15803 483 ------V----PN-----------FNSNN-----VKEQSRMIARNPSIEPVVREFLTMLAVCHTVYIELKHRTALASLLG 536 (1045)
Q Consensus 483 ------~----~~-----------f~~~~-----~~~~~svi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~lG 536 (1045)
. .+ +..+. +..+..+++.....|+++++..++++.+++.|+++.
T Consensus 486 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~---------- 555 (723)
T 3j09_A 486 VGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVG---------- 555 (723)
T ss_dssp EECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEE----------
T ss_pred ECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEE----------
Confidence 0 00 01111 001122333444567899999999999999888733
Q ss_pred CCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccc
Q psy15803 537 TTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHV 616 (1045)
Q Consensus 537 ~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdV 616 (1045)
+++|+....+..-. .++. -..+++|++|+||.++|+.+|+. +.|+|+|||.||+|||++|||
T Consensus 556 --------~~TGd~~~~a~~ia-----~~lg---i~~~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~v 617 (723)
T 3j09_A 556 --------MITGDNWRSAEAIS-----RELN---LDLVIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADL 617 (723)
T ss_dssp --------EECSSCHHHHHHHH-----HHHT---CSEEECSCCTTCHHHHHHHHTTT--CCEEEEECSSTTHHHHHHSSE
T ss_pred --------EECCCCHHHHHHHH-----HHcC---CcEEEccCCHHHHHHHHHHHhcC--CeEEEEECChhhHHHHhhCCE
Confidence 44454433222100 0000 01399999999999999999987 789999999999999999999
Q ss_pred cccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHHHHHHHHH
Q psy15803 617 GVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYVMELWFAI 680 (1045)
Q Consensus 617 Gigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~ 680 (1045)
||++ +|+|.+++++|.++..+++..+.+++ .+||++|+|+++++.|.+++|++. ++...+++
T Consensus 618 giamg~g~~~a~~~AD~vl~~~~~~~i~~~i-~~~r~~~~~i~~nl~~a~~~n~~~-i~~a~~~~ 680 (723)
T 3j09_A 618 GIAVGSGSDVAVESGDIVLIRDDLRDVVAAI-QLSRKTMSKIKQNIFWALIYNVIL-IPAAAGLL 680 (723)
T ss_dssp EEECCCCSCCSSCCSSEECSSCCTTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTT
T ss_pred EEEeCCCcHHHHHhCCEEEeCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhh
Confidence 9977 78999999999999999999999999 799999999999999999999985 44444443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-59 Score=568.14 Aligned_cols=452 Identities=17% Similarity=0.198 Sum_probs=341.8
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhhhh---h---hhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEE
Q psy15803 105 RYTTLIPLILIMVVSGIKEIIEDIKRHLAD---G---EINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMV 178 (1045)
Q Consensus 105 ~~~~~~~l~~i~~i~~i~~~~~~~~~~~~~---~---~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~il 178 (1045)
+|.++..+++++.++ +++|++.++++. + ++.+.+++|+|||++++|+++||+|||+|.|++||+|||||+|
T Consensus 95 ~~~~~~~i~~~~~ig---~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~v 171 (645)
T 3j08_A 95 FYETSVLLLAFLLLG---RTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVV 171 (645)
T ss_dssp CCCSHHHHHHHHHHH---HHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEE
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEE
Confidence 344455555555544 555555555443 3 3456789999999999999999999999999999999999999
Q ss_pred EeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCcccee
Q psy15803 179 LSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERIL 258 (1045)
Q Consensus 179 l~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l 258 (1045)
++|+ |+||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 172 l~G~-----~~VdeS~LTGES~Pv~K~~g~~v---------------------------~~Gt~~~~g~----------- 208 (645)
T 3j08_A 172 VEGE-----SYVDESMISGEPVPVLKSKGDEV---------------------------FGATINNTGV----------- 208 (645)
T ss_dssp EECC-----EEEECHHHHCCSSCEEECTTCEE---------------------------CTTCEECSSC-----------
T ss_pred EECc-----EEEEcccccCCCCceecCCCCEe---------------------------eccEEEecCc-----------
Confidence 9854 99999999999999999887655 8888888887
Q ss_pred eccceeecCcEEEEEEEEecCcchhhhhc---cCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCc
Q psy15803 259 LRGSMLRNTAWIIGIVVYTGPDSKLMKNA---TSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWTLGRNAGDW 335 (1045)
Q Consensus 259 ~~G~~l~nt~~~~~iV~~tG~~T~~~~~~---~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 335 (1045)
+.+.|++||.+|.++++. +.++.+++++++.+++++.+++++++++++++++.|.++..
T Consensus 209 -----------~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~------- 270 (645)
T 3j08_A 209 -----------LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH------- 270 (645)
T ss_dssp -----------EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS-------
T ss_pred -----------EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------
Confidence 789999999999777665 47888999999999999999999999998888776543311
Q ss_pred cccCCCchhhhHHHHHHHHhhccccchhhhhHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCC
Q psy15803 336 YLLSRNPSFHSNLLTFIILYNNLIPISLQVTLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKT 415 (1045)
Q Consensus 336 ~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKT 415 (1045)
.++...+.+++++++.+|||+|+++++++...+..++ +++|+++|+++.+|+||++++||||||
T Consensus 271 ------~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~v~~i~fDKT 334 (645)
T 3j08_A 271 ------APLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEKVTAVIFDKT 334 (645)
T ss_dssp ------CSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGGCCEEEEEGG
T ss_pred ------CcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhhCCCEEEEcCc
Confidence 1223367788999999999999999999999999988 788999999999999999999999999
Q ss_pred CccccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhcee-------eeecCCc------ee
Q psy15803 416 GTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHT-------VCSVAGN------IL 482 (1045)
Q Consensus 416 GTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~-------v~~~~~~------~l 482 (1045)
||||+|+|+|+++...+. ...++.........+.. ||..+.+........- .....+. ++
T Consensus 335 GTLT~~~~~v~~~~~~~~------~~~~~l~~aa~~e~~s~-hPla~Aiv~~a~~~g~~~~~~~~~~~~~g~g~~~~~v~ 407 (645)
T 3j08_A 335 GTLTKGKPEVTDLVPLNG------DERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGIL 407 (645)
T ss_dssp GTSSSSCCEEEEEEESSS------CHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHTTCCCCSCCCCEEETTTEEEETTEE
T ss_pred ccccCCCeEEEEEEeCCC------CHHHHHHHHHHHhhcCC-ChhHHHHHHHHHhcCCCcCCccceEEecCCceEEEEEE
Confidence 999999999999987642 12222222111122222 4554444433321110 0000010 00
Q ss_pred ------e----c-----------ccCCCC-----cccceEEEEecCCCCchhHHHHHHHHHHHHHhhhhhhHHHHHHHcC
Q psy15803 483 ------V----P-----------NFNSNN-----VKEQSRMIARNPSIEPVVREFLTMLAVCHTVYIELKHRTALASLLG 536 (1045)
Q Consensus 483 ------~----~-----------~f~~~~-----~~~~~svi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~lG 536 (1045)
. . .+..+. +..+..+++.....|+++++..++++.+++.|+++
T Consensus 408 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v----------- 476 (645)
T 3j08_A 408 VGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKV----------- 476 (645)
T ss_dssp EECHHHHHHTTCCCCHHHHHHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEE-----------
T ss_pred ECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEE-----------
Confidence 0 0 001111 01122333444456788999999999999988873
Q ss_pred CCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCC-cEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhcc
Q psy15803 537 TTNNNYALIIDGLALDYALKHELRKDFLELCLTCN-AVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAH 615 (1045)
Q Consensus 537 ~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~-~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~Ad 615 (1045)
.+++|+....+..- +..+. ..++++++|+||.++|+.+|+. +.|+|+|||.||+|||++||
T Consensus 477 -------~~~TGd~~~~a~~i---------a~~lgi~~~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~ 538 (645)
T 3j08_A 477 -------GMITGDNWRSAEAI---------SRELNLDLVIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQAD 538 (645)
T ss_dssp -------EEECSSCHHHHHHH---------HHHHTCSEEECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSS
T ss_pred -------EEEeCCCHHHHHHH---------HHHcCCCEEEEeCCHHhHHHHHHHHhhC--CeEEEEeCCHhHHHHHHhCC
Confidence 34455443322210 00000 1399999999999999999987 78999999999999999999
Q ss_pred ccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhhhheeehhhHHHHH
Q psy15803 616 VGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLLILYSFYKNICLYV 673 (1045)
Q Consensus 616 VGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~ 673 (1045)
|||++ +|+|.+++++|.++..+++..+.+++ .+||++|+|+++++.|.+.+|++.+.
T Consensus 539 vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i-~~~r~~~~~i~~nl~~a~~~N~~~i~ 596 (645)
T 3j08_A 539 LGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI-QLSRKTMSKIKQNIFWALIYNVILIP 596 (645)
T ss_dssp EEEEECCCSCCSSCCSSSEESSCCTTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHhCCEEEecCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99977 78999999999999999999999999 78999999999999999999998533
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=285.34 Aligned_cols=203 Identities=21% Similarity=0.238 Sum_probs=162.5
Q ss_pred hhhhhhhhcccccccccccccc----ccccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccc
Q psy15803 804 VREFLTMLAVCHTVIPEMKDGV----LQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSD 879 (1045)
Q Consensus 804 ~~~~l~~~slc~~a~~~~~~~~----~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~ 879 (1045)
++.+....++||++.....+.. .....|||+|.|+++++...+. +..+.+..|++++++||+|+
T Consensus 428 ~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~------------~~~~~~~~~~~~~~~pF~s~ 495 (1034)
T 3ixz_A 428 WRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLG------------NAMGYRERFPKVCEIPFNST 495 (1034)
T ss_pred HHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCC------------ChHHHHHhCcceEEeeecCC
Confidence 3456677888998765433221 1234589999999999988662 23344567899999999999
Q ss_pred cceEEEEEEcCC---CcEEEEEeCCcHHHHHHhcc----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHH
Q psy15803 880 RKRMSVIVRTPQ---NEIKVFCKGADNMILSRLDS----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKY 946 (1045)
Q Consensus 880 ~k~msvvv~~~~---~~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~ 946 (1045)
||||+++++..+ +++++|+|||||.|+++|+. +++.++.+.+.++.|+.+|+|||++|||.++.+++
T Consensus 496 rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~ 575 (1034)
T 3ixz_A 496 NKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDY 575 (1034)
T ss_pred CceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhc
Confidence 999999887543 67899999999999999963 23456778889999999999999999999987765
Q ss_pred HhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc
Q psy15803 947 KNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSS 1026 (1045)
Q Consensus 947 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~ 1026 (1045)
.++.... ....+..|+||+|+|+++++||||++++++|++|+++||+|+|+|||++.||.+||+++
T Consensus 576 ~~~~~~~--------------~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~l 641 (1034)
T 3ixz_A 576 PPGYAFD--------------VEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASV 641 (1034)
T ss_pred ccccccc--------------hhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc
Confidence 4332110 01124468999999999999999999999999999999999999999999999999999
Q ss_pred CccCCC
Q psy15803 1027 RLVGQD 1032 (1045)
Q Consensus 1027 gi~~~~ 1032 (1045)
||..++
T Consensus 642 gi~~~~ 647 (1034)
T 3ixz_A 642 GIISEG 647 (1034)
T ss_pred CCCCCC
Confidence 998654
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=284.58 Aligned_cols=202 Identities=21% Similarity=0.259 Sum_probs=158.4
Q ss_pred hhhhhhhcccccccccccccc----ccccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeecccccc
Q psy15803 805 REFLTMLAVCHTVIPEMKDGV----LQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDR 880 (1045)
Q Consensus 805 ~~~l~~~slc~~a~~~~~~~~----~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~ 880 (1045)
+.++.+.++||++........ .....|||+|.|+++++++.+. +..+.+..|++++++||+|+|
T Consensus 424 ~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~------------~~~~~~~~~~~~~~~pF~s~r 491 (1028)
T 2zxe_A 424 SALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCG------------SVQGMRDRNPKIVEIPFNSTN 491 (1028)
T ss_dssp HHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHS------------CHHHHHHHSCEEEEECCCTTT
T ss_pred HHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCC------------CHHHHHHhCceEEEeccCccc
Confidence 356677888998765432211 1123589999999999987641 112234578899999999999
Q ss_pred ceEEEEEEcC---CCcEEEEEeCCcHHHHHHhcc----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHH
Q psy15803 881 KRMSVIVRTP---QNEIKVFCKGADNMILSRLDS----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYK 947 (1045)
Q Consensus 881 k~msvvv~~~---~~~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~ 947 (1045)
|||+++++.+ ++++++|+|||||.|+++|+. +++.++++.+.+++|+++|+|||++|||.++++++.
T Consensus 492 k~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~ 571 (1028)
T 2zxe_A 492 KYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYN 571 (1028)
T ss_dssp CEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSC
T ss_pred ceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccc
Confidence 9999999974 467899999999999999963 233466788889999999999999999999765432
Q ss_pred hHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Q psy15803 948 NWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSR 1027 (1045)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~g 1027 (1045)
++.+ . +++ ..+..|+|++|+|+++++||||++++++|++||++||+|||+|||++.||.+||++||
T Consensus 572 ~~~~--------~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lg 637 (1028)
T 2zxe_A 572 EGYP--------F-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 637 (1028)
T ss_dssp TTCC--------C-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred cccc--------c-chh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcC
Confidence 2100 0 000 0123578999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC
Q psy15803 1028 LVGQD 1032 (1045)
Q Consensus 1028 i~~~~ 1032 (1045)
|..++
T Consensus 638 i~~~~ 642 (1028)
T 2zxe_A 638 IISEG 642 (1028)
T ss_dssp SSCTT
T ss_pred CCCCC
Confidence 98653
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-25 Score=280.32 Aligned_cols=212 Identities=22% Similarity=0.281 Sum_probs=159.9
Q ss_pred hhhhhhhhcccccccccccccccc-ccCCChhHHHHHHHHHHcCeEEeccccceeeee------cccccceeEEEEeecc
Q psy15803 804 VREFLTMLAVCHTVIPEMKDGVLQ-YHASSPDEKALILGAKAFGYVFTSKHYKEIEIT------ALGETQRYVILNVLEF 876 (1045)
Q Consensus 804 ~~~~l~~~slc~~a~~~~~~~~~~-~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~------~~~~~~~~~il~~~~F 876 (1045)
++.+..+.++||++.....+.... ...|||+|.|++.++++.|+ +.... ..+... ....+..|++++++||
T Consensus 411 ~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~-~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~pF 488 (995)
T 3ar4_A 411 LVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV-FNTEV-RNLSKVERANACNSVIRQLMKKEFTLEF 488 (995)
T ss_dssp HHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCT-TCCCC-TTSCTTTSTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCC-ccccc-cccccccccccchhhhhhhCceEEEeec
Confidence 345666778898876543221112 23489999999999998886 21110 000000 0013457999999999
Q ss_pred ccccceEEEEEEcCCC-----cEEEEEeCCcHHHHHHhcc----------CchhHHHHHHHHHHH--HHhcCeEEEEEEE
Q psy15803 877 TSDRKRMSVIVRTPQN-----EIKVFCKGADNMILSRLDS----------HSKYVDETKTHLEQF--ASSGYRTLCFGVA 939 (1045)
Q Consensus 877 ~s~~k~msvvv~~~~~-----~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~~~G~rvl~~a~k 939 (1045)
+|+||||||+++.+++ ++.+|+|||||.|+++|+. +++.++++.+.+++| +++|+|||++|||
T Consensus 489 ~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k 568 (995)
T 3ar4_A 489 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATR 568 (995)
T ss_dssp ETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEE
T ss_pred CCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEE
Confidence 9999999999997665 6789999999999999963 223456788888999 9999999999999
Q ss_pred ecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHH
Q psy15803 940 KIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETA 1019 (1045)
Q Consensus 940 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA 1019 (1045)
.++..+.. ....+ ...++.+|+|++|+|+++++||+|++++++|+.||++||++||+|||+..||
T Consensus 569 ~~~~~~~~----------~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta 633 (995)
T 3ar4_A 569 DTPPKREE----------MVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTA 633 (995)
T ss_dssp SSCCCGGG----------CCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred ecCccccc----------ccccc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence 98643210 00000 0123567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccCCC
Q psy15803 1020 INIGYSSRLVGQD 1032 (1045)
Q Consensus 1020 ~~ia~~~gi~~~~ 1032 (1045)
.+||+++||...+
T Consensus 634 ~~ia~~lgi~~~~ 646 (995)
T 3ar4_A 634 IAICRRIGIFGEN 646 (995)
T ss_dssp HHHHHHHTSSCTT
T ss_pred HHHHHHcCcCCCC
Confidence 9999999998754
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-24 Score=267.21 Aligned_cols=160 Identities=17% Similarity=0.191 Sum_probs=138.3
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
++|+|.|+++++.+. ...+..|++++.+||+|.+|||+++++..+|+.++++|||||.|+++|+
T Consensus 371 ~~p~~~Al~~~~~~~----------------~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~ 434 (885)
T 3b8c_A 371 QDAIDAAMVGMLADP----------------KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAK 434 (885)
T ss_dssp CCSHHHHHHHTTCCT----------------TCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSC
T ss_pred CCchHHHHHHHhhch----------------hhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhcc
Confidence 699999999876421 1123467788999999999999999987677788999999999999997
Q ss_pred cCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCcc
Q psy15803 911 SHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKL 990 (1045)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l 990 (1045)
..+..++++.+.+++|+++|+||+++|||.+++++. +..|++++|+|+++++|||
T Consensus 435 ~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~-------------------------~~~e~~l~~lGli~i~Dp~ 489 (885)
T 3b8c_A 435 ASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK-------------------------ESPGAPWEFVGLLPLFDPP 489 (885)
T ss_dssp CCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS-------------------------SCCCCCCCCCEEEEECCCC
T ss_pred CchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccc-------------------------cccccCcEEEEEEEeeccc
Confidence 655556678888999999999999999998875421 3457899999999999999
Q ss_pred CccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCC
Q psy15803 991 QEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQ 1031 (1045)
Q Consensus 991 r~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~ 1031 (1045)
|++++++|++||++||+|+|+||||+.||.+||+++||..+
T Consensus 490 R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~ 530 (885)
T 3b8c_A 490 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN 530 (885)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTC
T ss_pred chhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccc
Confidence 99999999999999999999999999999999999999653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.1e-23 Score=254.19 Aligned_cols=154 Identities=22% Similarity=0.278 Sum_probs=134.5
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
++|+|.|+++++.+.+. ..+....|++++.+||+|.+|+|+++++.++|+.++++|||||.|+++|+
T Consensus 419 ~~P~e~Al~~~~~~~~~-------------~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~ 485 (920)
T 1mhs_A 419 IDAIDKAFLKSLKYYPR-------------AKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVE 485 (920)
T ss_dssp CCSHHHHHHHHHHHSSS-------------CCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCC
T ss_pred CChHHHHHHHHHHhccc-------------chhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhcc
Confidence 49999999999987652 11223568899999999999999999987778888999999999999997
Q ss_pred c----CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEe
Q psy15803 911 S----HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAV 986 (1045)
Q Consensus 911 ~----~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~ 986 (1045)
. +++.++++.+.+++|+++|+||+++|||.. |++++|+|++++
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~---------------------------------e~~l~~lGli~i 532 (920)
T 1mhs_A 486 EDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG---------------------------------EGSWEILGIMPC 532 (920)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS---------------------------------SCSCCCCBBCCC
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc---------------------------------ccccEEEEEEEE
Confidence 4 223456778889999999999999998731 368999999999
Q ss_pred cCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccC
Q psy15803 987 EDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVG 1030 (1045)
Q Consensus 987 ~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~ 1030 (1045)
+||||++++++|++||++||+|+|+||||+.||.+||+++||..
T Consensus 533 ~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~ 576 (920)
T 1mhs_A 533 MDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGT 576 (920)
T ss_dssp CCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred eccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999999964
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-22 Score=184.32 Aligned_cols=103 Identities=20% Similarity=0.265 Sum_probs=94.0
Q ss_pred hhhhhhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCCCCC
Q psy15803 132 LADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETS 211 (1045)
Q Consensus 132 ~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~ 211 (1045)
+++.++.+..++|+|+|++++|++++|+|||+|.|++||.|||||+|++++ +.||||+|||||.|+.|.+++..
T Consensus 4 ~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-----~~vdeS~LTGEs~pv~k~~g~~v- 77 (113)
T 2hc8_A 4 KKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----SYVDESMISGEPVPVLKSKGDEV- 77 (113)
T ss_dssp HHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----EEEECHHHHCCSSCEEECTTCEE-
T ss_pred HHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-----EEEEccccCCCCccEEECCCCEE-
Confidence 345667788999999999999999999999999999999999999999964 89999999999999999987654
Q ss_pred CCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc
Q psy15803 212 SLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT 288 (1045)
Q Consensus 212 ~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~ 288 (1045)
|+||++.+|. +.+.|++||.+|.++++.+
T Consensus 78 --------------------------~aGt~~~~G~----------------------~~~~V~~~g~~T~~~~i~~ 106 (113)
T 2hc8_A 78 --------------------------FGATINNTGV----------------------LKIRATRVGGETLLAQIVK 106 (113)
T ss_dssp --------------------------CTTCEECSSC----------------------EEEEEEECGGGSHHHHHHH
T ss_pred --------------------------EeCCEEeece----------------------EEEEEEEecCcCHHHHHHH
Confidence 9999999998 7899999999999998764
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-20 Score=176.30 Aligned_cols=101 Identities=16% Similarity=0.213 Sum_probs=90.3
Q ss_pred hhhhcccEEEEEECCe------EEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCC
Q psy15803 134 DGEINHRSVDVIRNGM------IYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAP 207 (1045)
Q Consensus 134 ~~~~n~~~~~V~r~g~------~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~ 207 (1045)
+.++.+..++|+|+|+ +++|++++|+|||+|.|++||.|||||+|++++ +.||||+|||||.|+.|.++
T Consensus 12 L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-----~~vdeS~LTGEs~pv~k~~g 86 (124)
T 2kij_A 12 LISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-----SMVDESLITGEAMPVAKKPG 86 (124)
T ss_dssp HHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-----CEEECTTTTCCSSCEECCTT
T ss_pred HhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-----EEEEeccccCCCccEEeCCC
Confidence 3556778899999764 789999999999999999999999999999965 68999999999999999987
Q ss_pred CCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhc
Q psy15803 208 NETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNA 287 (1045)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~ 287 (1045)
+.+ |+||++.+|. +.+.|++||.+|.++++.
T Consensus 87 ~~v---------------------------~aGt~~~~G~----------------------~~~~v~~~g~~T~~~~I~ 117 (124)
T 2kij_A 87 STV---------------------------IAGSINQNGS----------------------LLICATHVGADTTLSQIV 117 (124)
T ss_dssp EEE---------------------------CTTCEEESSC----------------------CEEEECSCTTTCHHHHHH
T ss_pred CEE---------------------------EcCCEEeeeE----------------------EEEEEEEecccCHHHHHH
Confidence 655 9999999998 679999999999999876
Q ss_pred c
Q psy15803 288 T 288 (1045)
Q Consensus 288 ~ 288 (1045)
+
T Consensus 118 ~ 118 (124)
T 2kij_A 118 K 118 (124)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.3e-20 Score=181.77 Aligned_cols=123 Identities=22% Similarity=0.312 Sum_probs=100.8
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
+||+|.|+++++...+ ....+..|++++++||||+|||||++++.+++++++++|||||.|+++|+
T Consensus 33 ~n~~d~Ail~~~~~~~--------------~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~ 98 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEES--------------ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCS 98 (170)
T ss_dssp CCHHHHHHHHTSCHHH--------------HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEE
T ss_pred CChHHHHHHHHHHhcC--------------hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhH
Confidence 6999999998875432 11234679999999999999999999998778889999999999999997
Q ss_pred c----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEE
Q psy15803 911 S----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHL 980 (1045)
Q Consensus 911 ~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 980 (1045)
. +++.++++.+.++.|+++|+|||++|||.++.++.. + ....|+||+|
T Consensus 99 ~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~-~---------------------~~~~E~~L~f 156 (170)
T 3gwi_A 99 QVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD-Y---------------------QRADESDLIL 156 (170)
T ss_dssp EEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC-C---------------------CGGGSCSEEE
T ss_pred HHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc-c---------------------CccccCCcEE
Confidence 3 345567889999999999999999999999754310 0 0346899999
Q ss_pred EEEEEecCc
Q psy15803 981 LGASAVEDK 989 (1045)
Q Consensus 981 lG~~~~~d~ 989 (1045)
+|++||-|.
T Consensus 157 ~G~~g~~~~ 165 (170)
T 3gwi_A 157 EGYIAFLDH 165 (170)
T ss_dssp EEEEEEEC-
T ss_pred Eehhccccc
Confidence 999999885
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.7e-20 Score=200.78 Aligned_cols=226 Identities=17% Similarity=0.169 Sum_probs=140.3
Q ss_pred CCCCCceecCCchhhhcccceEEeecCCCccccceEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHH
Q psy15803 388 PTDTPAAARTSNLNEELGMVKFVFSDKTGTLTRNVMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTM 467 (1045)
Q Consensus 388 ~~~~~~~~r~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (1045)
.+++|+++|++..+|.|++|++||||||||||+|+|.+.++. ..... ..+....+..+.| +..+.+...
T Consensus 9 ~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~-~~~~~------l~~~~~~e~~s~h----p~a~ai~~~ 77 (263)
T 2yj3_A 9 MLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI-GDSLS------LAYAASVEALSSH----PIAKAIVKY 77 (263)
Confidence 378999999999999999999999999999999999998874 10000 0000000001111 111111111
Q ss_pred Hhhce-------eeeecCCcee-------ecccCCCC------cccceEEEEecCCCCchhHHHHHHHHHHHHHhhhhhh
Q psy15803 468 LAVCH-------TVCSVAGNIL-------VPNFNSNN------VKEQSRMIARNPSIEPVVREFLTMLAVCHTVYIELKH 527 (1045)
Q Consensus 468 l~~c~-------~v~~~~~~~l-------~~~f~~~~------~~~~~svi~~~~~~~~~~~~~~~ti~~~~~~~~~~~~ 527 (1045)
+.... .+....+..+ .....+.. ...+-.........++++++..+++..+++.|+++.+
T Consensus 78 ~~~~g~~~~~~~~~~~~~G~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i 157 (263)
T 2yj3_A 78 AKEQGVKILEVKDFKEISGIGVRGKISDKIIEVKKAENNNDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIII 157 (263)
Confidence 10000 0000000000 00000000 0000011111222446666777777777777776544
Q ss_pred HHH--------HHHHcCCCCCCceEEEechhhHHHhhHHHHHHHHHHhhcCCcEEEEecCcccHHHHHHHHHhcCCCEEE
Q psy15803 528 RTA--------LASLLGTTNNNYALIIDGLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTL 599 (1045)
Q Consensus 528 ~~~--------~~~~lG~~~~~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~ 599 (1045)
.|. +++.+|+.. +|+.+.|++|...++.++.. +..|+
T Consensus 158 ~T~~~~~~~~~~~~~~gl~~----------------------------------~f~~~~p~~k~~~~~~l~~~-~~~~~ 202 (263)
T 2yj3_A 158 LSGDKEDKVKELSKELNIQE----------------------------------YYSNLSPEDKVRIIEKLKQN-GNKVL 202 (263)
Confidence 441 122222221 67778899999999999987 77899
Q ss_pred EecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcchhhhhhhhh
Q psy15803 600 AIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRMCLL 660 (1045)
Q Consensus 600 ~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i~~~ 660 (1045)
|||||.||++|+++|++|++. .+++.+.+.++.++..+++..|..++ ..+|.++++++++
T Consensus 203 ~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l-~~~r~~~~~i~~n 263 (263)
T 2yj3_A 203 MIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLI-KNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999955 56777777788887779999999988 8899999998764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.46 E-value=2.4e-15 Score=166.15 Aligned_cols=131 Identities=11% Similarity=0.010 Sum_probs=95.7
Q ss_pred CCchhHHHHHHHHHHHHHhhhhhhH--------HHHHHHcCCCCCCceE-----EEechhhHHHhhHHHHHHHHHHhhcC
Q psy15803 504 IEPVVREFLTMLAVCHTVYIELKHR--------TALASLLGTTNNNYAL-----IIDGLALDYALKHELRKDFLELCLTC 570 (1045)
Q Consensus 504 ~~~~~~~~~~ti~~~~~~~~~~~~~--------~~~~~~lG~~~~~~~~-----vi~G~~l~~~~~~~~~~~~~~~~~~~ 570 (1045)
..++++++...+..|++.|+.+.+. .++++.+|+...+..+ ..+.+.+......+
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~------------ 206 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGE------------ 206 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSS------------
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEecccc------------
Confidence 4577888899999999999984443 3679999987544222 11221111000000
Q ss_pred CcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHH---hccccc--cc------cCchhhhhhhccccccchh
Q psy15803 571 NAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQ---KAHVGV--GI------SGVEGLQAACASDYSIGQF 639 (1045)
Q Consensus 571 ~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~---~AdVGi--gi------~g~e~a~~a~~~~~~~~~f 639 (1045)
..-++++..|.+|...+..+++. ++.|+|+|||+||+||++ +||||| |+ +|++.+++++|+++++|+|
T Consensus 207 ~i~~~~k~~~~~k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~ 285 (297)
T 4fe3_A 207 LIHVFNKHDGALKNTDYFSQLKD-NSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEES 285 (297)
T ss_dssp CCCTTCHHHHHHTCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCB
T ss_pred ccchhhcccHHHHHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCC
Confidence 00146777889999988888887 889999999999999955 999999 54 4667779999999999999
Q ss_pred hhHHHHHH
Q psy15803 640 RFLLKLLF 647 (1045)
Q Consensus 640 ~~l~~lll 647 (1045)
..++++||
T Consensus 286 ~~v~~~il 293 (297)
T 4fe3_A 286 LEVVNSIL 293 (297)
T ss_dssp CHHHHHHH
T ss_pred hHHHHHHH
Confidence 99999985
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.4e-13 Score=147.28 Aligned_cols=90 Identities=26% Similarity=0.301 Sum_probs=70.2
Q ss_pred EEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhcch
Q psy15803 574 ICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHGSW 652 (1045)
Q Consensus 574 v~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~ 652 (1045)
++..+.|.+|...++.+.+. . .++|+||+.||++|+++|++|+++ .+.+..+++++.++..+++..+.++| ..+|.
T Consensus 186 ~f~~~~~~~k~~~~k~~~~~-~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l-~~~~~ 262 (280)
T 3skx_A 186 YFAEVLPHEKAEKVKEVQQK-Y-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIV-ELSRK 262 (280)
T ss_dssp EECSCCGGGHHHHHHHHHTT-S-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHH-HHHHT
T ss_pred HhHhcCHHHHHHHHHHHHhc-C-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHH-HHHHH
Confidence 78899999999999999886 3 579999999999999999999976 46677778889999999999999999 78888
Q ss_pred hhhhhhhhhheeeh
Q psy15803 653 NYNRMCLLILYSFY 666 (1045)
Q Consensus 653 ~~~~i~~~i~~~~~ 666 (1045)
+++++++++.|.+.
T Consensus 263 ~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 263 TYSKFHGLSAWSHP 276 (280)
T ss_dssp CCC-----------
T ss_pred HHHHHHHHHHHHHh
Confidence 88888887766543
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.42 E-value=6.5e-13 Score=145.81 Aligned_cols=82 Identities=20% Similarity=0.293 Sum_probs=60.3
Q ss_pred EEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhcccccccc-CchhhhhhhccccccchhhhHHHHHHhhcch
Q psy15803 574 ICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAACASDYSIGQFRFLLKLLFVHGSW 652 (1045)
Q Consensus 574 v~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~-g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~ 652 (1045)
+|..+.|..|...++.++.. ..++||||+.||++|.++|++|+++. +.+..++.++.++..+++..+..++ ..+|.
T Consensus 205 ~f~~i~~~~K~~~~~~l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l-~~~~~ 281 (287)
T 3a1c_A 205 VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI-QLSRK 281 (287)
T ss_dssp EECSCCTTCHHHHHHHHTTT--CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHH-HTTC-
T ss_pred eeeecChHHHHHHHHHHhcC--CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHH-HHHHH
Confidence 77888899999999998876 77999999999999999999998663 3343444444444448999999987 78998
Q ss_pred hhhhhh
Q psy15803 653 NYNRMC 658 (1045)
Q Consensus 653 ~~~~i~ 658 (1045)
++++++
T Consensus 282 ~~~~i~ 287 (287)
T 3a1c_A 282 TMSKIK 287 (287)
T ss_dssp ------
T ss_pred HHHhhC
Confidence 888764
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.8e-10 Score=137.75 Aligned_cols=133 Identities=19% Similarity=0.232 Sum_probs=105.2
Q ss_pred CCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHh
Q psy15803 830 ASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRL 909 (1045)
Q Consensus 830 ~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~ 909 (1045)
.++|.+.|+++++++.|+.+ ....+|++.+.+.. ... -+++ .+.+|+++.+.+..
T Consensus 462 s~hPla~Aiv~~a~~~~~~~---------------------~~~~~f~~~~g~gv-~~~-~~g~--~~~~G~~~~~~~~~ 516 (736)
T 3rfu_A 462 SEHPLANAIVHAAKEKGLSL---------------------GSVEAFEAPTGKGV-VGQ-VDGH--HVAIGNARLMQEHG 516 (736)
T ss_dssp SCCHHHHHHHHHHHTTCCCC---------------------CCCSCCCCCTTTEE-EEC-SSSS--CEEEESHHHHHHHC
T ss_pred CCChHHHHHHHHHHhcCCCc---------------------cCcccccccCCceE-EEE-ECCE--EEEEcCHHHHHHcC
Confidence 36899999999998766422 12346777766543 222 2333 24579999887653
Q ss_pred ccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCc
Q psy15803 910 DSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDK 989 (1045)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 989 (1045)
.. .+...+..++++.+|+|++++| .|.+++|+++++|+
T Consensus 517 ~~----~~~~~~~~~~~~~~G~~vl~va--------------------------------------~d~~~~G~i~i~D~ 554 (736)
T 3rfu_A 517 GD----NAPLFEKADELRGKGASVMFMA--------------------------------------VDGKTVALLVVEDP 554 (736)
T ss_dssp CC----CHHHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEECC
T ss_pred CC----hhHHHHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEeecc
Confidence 22 2456677889999999999999 35689999999999
Q ss_pred cCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 990 LQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 990 lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+|++++++|++||++|++++|+|||+..||.++|+++||-
T Consensus 555 i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~ 594 (736)
T 3rfu_A 555 IKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK 594 (736)
T ss_dssp BCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999985
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.4e-09 Score=131.55 Aligned_cols=130 Identities=18% Similarity=0.191 Sum_probs=98.8
Q ss_pred CCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHh
Q psy15803 830 ASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRL 909 (1045)
Q Consensus 830 ~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~ 909 (1045)
..+|.+.|+++++.+.|+.+... ..+ .+...+ .+.. ..+.+|+++.+.+..
T Consensus 446 s~hP~~~Ai~~~a~~~~~~~~~~-------------~~~--------~~~~g~-g~~~-------~~~~~g~~~~~~~~~ 496 (723)
T 3j09_A 446 SEHPIAEAIVKKALEHGIELGEP-------------EKV--------EVIAGE-GVVA-------DGILVGNKRLMEDFG 496 (723)
T ss_dssp CCSHHHHHHHHHHHHTTCCCCSC-------------CCC--------EEETTT-EEEE-------TTEEEECHHHHHHTT
T ss_pred CCCchhHHHHHHHHhcCCCcCCc-------------cce--------EEecCC-ceEE-------EEEEECCHHHHHhcC
Confidence 36899999999999877532211 111 111111 0110 124578888775532
Q ss_pred ccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCc
Q psy15803 910 DSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDK 989 (1045)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 989 (1045)
. ...+++.+..+.++.+|.|++++| .|++++|+++++|+
T Consensus 497 ~---~~~~~~~~~~~~~~~~g~~~~~va--------------------------------------~~~~~~G~i~i~D~ 535 (723)
T 3j09_A 497 V---AVSNEVELALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDT 535 (723)
T ss_dssp C---CCCHHHHHHHHHHHTTTCEEEEEE--------------------------------------ETTEEEEEEEEECC
T ss_pred C---CccHHHHHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEeecCC
Confidence 2 224567788899999999999999 46799999999999
Q ss_pred cCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 990 LQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 990 lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+|++++++|++||++|++++|+|||+..+|.++|+++||-
T Consensus 536 ~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~ 575 (723)
T 3j09_A 536 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD 575 (723)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred cchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999999984
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.9e-09 Score=128.96 Aligned_cols=130 Identities=18% Similarity=0.194 Sum_probs=98.6
Q ss_pred CCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHh
Q psy15803 830 ASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRL 909 (1045)
Q Consensus 830 ~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~ 909 (1045)
..+|++.|+++++++.|+.+... .. |.+...+ .+.. ..+.+|+++.+.+..
T Consensus 368 s~hPla~Aiv~~a~~~g~~~~~~-------------~~--------~~~~~g~-g~~~-------~~v~~g~~~~~~~~~ 418 (645)
T 3j08_A 368 SEHPIAEAIVKKALEHGIELGEP-------------EK--------VEVIAGE-GVVA-------DGILVGNKRLMEDFG 418 (645)
T ss_dssp CCSHHHHHHHHHHHHTTCCCCSC-------------CC--------CEEETTT-EEEE-------TTEEEECHHHHHHTT
T ss_pred CCChhHHHHHHHHHhcCCCcCCc-------------cc--------eEEecCC-ceEE-------EEEEECCHHHHHhcC
Confidence 36899999999999877532211 11 1111111 0110 124578888775532
Q ss_pred ccCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCc
Q psy15803 910 DSHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDK 989 (1045)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 989 (1045)
. ..++.+.+..++++.+|+|++.+| .|.+++|+++++|+
T Consensus 419 ~---~~~~~~~~~~~~~~~~g~~~l~va--------------------------------------~~~~~~G~i~~~D~ 457 (645)
T 3j08_A 419 V---AVSNEVELALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDT 457 (645)
T ss_dssp C---CCCHHHHHHHHHHHTTTCCCEEEE--------------------------------------ETTEEEEEEEEECC
T ss_pred C---CccHHHHHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEecCC
Confidence 2 234567778899999999999998 46789999999999
Q ss_pred cCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 990 LQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 990 lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+|++++++|++||++|++++|+|||+..+|.++|+++|+-
T Consensus 458 l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~ 497 (645)
T 3j08_A 458 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD 497 (645)
T ss_dssp CTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999984
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3.6e-07 Score=93.00 Aligned_cols=87 Identities=13% Similarity=0.155 Sum_probs=68.1
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccc----hhhhHHHHHHhhcch
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIG----QFRFLLKLLFVHGSW 652 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~----~f~~l~~lll~~Gr~ 652 (1045)
..|...++.+.+..| ..++|+||+.||++|+++|++|+++ .+.+..++.++.++..+ .++.+.+.+ ...|.
T Consensus 93 ~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l-~~~~~ 171 (189)
T 3mn1_A 93 EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELI-LSAQG 171 (189)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHH-HHHTT
T ss_pred CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHH-HHccC
Confidence 778887777665433 6799999999999999999999977 56677777777776654 378888888 45788
Q ss_pred hhhhhhhhhheeehhh
Q psy15803 653 NYNRMCLLILYSFYKN 668 (1045)
Q Consensus 653 ~~~~i~~~i~~~~~~n 668 (1045)
.++++.+++.|.+.+|
T Consensus 172 ~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 172 NLEAAHSVYLEGHHHH 187 (189)
T ss_dssp CHHHHHHTTSTTC---
T ss_pred cHHHHHHHHhcccccc
Confidence 9999999999988776
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=97.81 E-value=3.2e-05 Score=79.78 Aligned_cols=72 Identities=14% Similarity=0.075 Sum_probs=54.5
Q ss_pred EEEecCcccHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch----hhhHHHH
Q psy15803 574 ICCRVSPLQKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ----FRFLLKL 645 (1045)
Q Consensus 574 v~~r~sP~qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~----f~~l~~l 645 (1045)
++..+ ..|...++.+.+.. ...++|+||+.||++|+++|++++++ .+.+..+++++.++..+. ++.+.+.
T Consensus 118 ~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ 195 (211)
T 3ij5_A 118 LYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVCDL 195 (211)
T ss_dssp EECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHHH
T ss_pred hhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHHHH
Confidence 44444 67888887766542 36799999999999999999999977 466777888887776552 6777777
Q ss_pred HH
Q psy15803 646 LF 647 (1045)
Q Consensus 646 ll 647 (1045)
++
T Consensus 196 ll 197 (211)
T 3ij5_A 196 IL 197 (211)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=97.71 E-value=2.1e-05 Score=87.81 Aligned_cols=87 Identities=18% Similarity=0.219 Sum_probs=63.7
Q ss_pred ccHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHHhhcchhhhhh
Q psy15803 581 LQKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWNYNRM 657 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~~~~i 657 (1045)
..|...++.+.+.. ...++|+|||.||++|+++|++|+++.+.+..++.++.++..+++..+..+| .......+|+
T Consensus 244 kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~~~~~~~~~~a~~v~~~~~l~~v~~~L-~~~l~~~~r~ 322 (335)
T 3n28_A 244 QTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAKAQTAVRFAGLGGVVCIL-SAALVAQQKL 322 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHTTSSEEESSSCTHHHHHHH-HHHHHHTTCC
T ss_pred hhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEEecCCHHHHHHHH-HhHHHHhhhh
Confidence 45555555544332 3679999999999999999999999988899999999999999999999888 4555556788
Q ss_pred hhhhheeehhh
Q psy15803 658 CLLILYSFYKN 668 (1045)
Q Consensus 658 ~~~i~~~~~~n 668 (1045)
+.++.+.+.+|
T Consensus 323 ~~~~~~~~~~~ 333 (335)
T 3n28_A 323 SWKSKEGHHHH 333 (335)
T ss_dssp CCC--------
T ss_pred ccccccccccc
Confidence 88888877765
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=97.66 E-value=9.2e-05 Score=74.05 Aligned_cols=69 Identities=13% Similarity=0.123 Sum_probs=52.8
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch----hhhHHHHHHhh
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ----FRFLLKLLFVH 649 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~----f~~l~~lll~~ 649 (1045)
..|...++.+.+..| ..++|+||+.||++|++.|++|+++ .+.+..++.++.++..++ ++.+.++|+.+
T Consensus 85 ~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~~ 161 (176)
T 3mmz_A 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREIASWILGP 161 (176)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 668887777665533 6799999999999999999999977 566777777777666555 67777777544
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=97.63 E-value=4.8e-05 Score=77.48 Aligned_cols=68 Identities=19% Similarity=0.116 Sum_probs=51.1
Q ss_pred ccHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch----hhhHHHHHHh
Q psy15803 581 LQKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ----FRFLLKLLFV 648 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~----f~~l~~lll~ 648 (1045)
..|...++.+.+.. ...++|+||+.||.+|+++|++++++ .+.+..++.++.+...++ ++.+.+.++.
T Consensus 99 k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~ 174 (195)
T 3n07_A 99 DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQ 174 (195)
T ss_dssp SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHH
Confidence 56777666665432 35799999999999999999999987 566777888877776543 5667777743
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00047 Score=69.11 Aligned_cols=83 Identities=11% Similarity=0.036 Sum_probs=55.0
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhh----hHHHHHHhhcch
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFR----FLLKLLFVHGSW 652 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~----~l~~lll~~Gr~ 652 (1045)
..|...++.+.+..| ..++||||+.||++|+++|++++.+ .+.+..++.++.++...+-. .+.+.++ ..|.
T Consensus 82 k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l-~~~~ 160 (180)
T 1k1e_A 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMIL-QAQG 160 (180)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHH-HHTT
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHH-HhcC
Confidence 557777765554324 6799999999999999999999966 56677777777666554322 4444442 3444
Q ss_pred hhhhhhhhhhee
Q psy15803 653 NYNRMCLLILYS 664 (1045)
Q Consensus 653 ~~~~i~~~i~~~ 664 (1045)
.++++...+.|.
T Consensus 161 ~~~~~~~~~~~~ 172 (180)
T 1k1e_A 161 KSSVFDTAQGFL 172 (180)
T ss_dssp CTHHHHCHHHHH
T ss_pred chhhhhhccchh
Confidence 566666544443
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00014 Score=73.76 Aligned_cols=64 Identities=19% Similarity=0.196 Sum_probs=47.7
Q ss_pred CCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch----hhhHHHHHHhhcchhhhhhhh
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ----FRFLLKLLFVHGSWNYNRMCL 659 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~----f~~l~~lll~~Gr~~~~~i~~ 659 (1045)
...++|+||+.||.+|++.|++++++ .+.+..++.++.+...++ ++.+.+.++ ..|..|.++.+
T Consensus 110 ~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll-~~~~~~~~~~~ 178 (191)
T 3n1u_A 110 DDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLIL-NAQNKAELAIT 178 (191)
T ss_dssp GGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHH-HHTTCHHHHHH
T ss_pred HHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHH-HhcCcHHHHHH
Confidence 45799999999999999999999977 456777777777776655 667777774 34545554444
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00017 Score=80.12 Aligned_cols=90 Identities=12% Similarity=0.087 Sum_probs=66.0
Q ss_pred cccHHHHHHHHHhcC-CCEEEEecCCccChHHHHhc----cccccccCchhhhhhhccccccchh----hhHHHHHHhhc
Q psy15803 580 PLQKAEVVELVTVNT-NSVTLAIGDGANDVAMIQKA----HVGVGISGVEGLQAACASDYSIGQF----RFLLKLLFVHG 650 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~-g~~v~~iGDG~ND~~al~~A----dVGigi~g~e~a~~a~~~~~~~~~f----~~l~~lll~~G 650 (1045)
+.+|...++.++... .+.|+++|||.||++|++.| ++||++++.+..+++++.+....+. ..|.+++ ..|
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vamna~~~lk~~Ad~v~~~~~~dGV~~~l~~~~-~~~ 283 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKHADVVIISPTAMSEAKVIELFM-ERK 283 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTTCSEEEECSSTHHHHHHHHHHH-HHG
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEecCCHHHHhhCcEEecCCCCCHHHHHHHHHH-HcC
Confidence 567888888766441 25599999999999999999 9999887678888888877766555 3344444 689
Q ss_pred chhhhhhhh-------hhheeehhhHHH
Q psy15803 651 SWNYNRMCL-------LILYSFYKNICL 671 (1045)
Q Consensus 651 r~~~~~i~~-------~i~~~~~~ni~~ 671 (1045)
|..+ ++-+ .+.+....|+-.
T Consensus 284 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 310 (332)
T 1y8a_A 284 ERAF-EVLSAVSIPETEIYIMENSDFGE 310 (332)
T ss_dssp GGGG-GGGGGCCCTTCEEEEGGGSCHHH
T ss_pred Cchh-HHHHhhccCCCceEEecCCCHHH
Confidence 9888 6666 555555566544
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00081 Score=66.07 Aligned_cols=72 Identities=14% Similarity=0.101 Sum_probs=55.1
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch----hhhHHHHHHhhcch
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ----FRFLLKLLFVHGSW 652 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~----f~~l~~lll~~Gr~ 652 (1045)
..|...++.+.+..+ ..++|+||+.||.+|.++|++++.+ .+.+..++.++.++..++ ++.+.+.++ +|+|
T Consensus 78 kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~ 156 (164)
T 3e8m_A 78 VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVEKVL-GINL 156 (164)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHHHHH-ccCc
Confidence 556666665554423 5799999999999999999999966 677888888887777766 778888886 6664
Q ss_pred h
Q psy15803 653 N 653 (1045)
Q Consensus 653 ~ 653 (1045)
.
T Consensus 157 ~ 157 (164)
T 3e8m_A 157 E 157 (164)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0049 Score=66.69 Aligned_cols=74 Identities=24% Similarity=0.261 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCccHHHH
Q psy15803 918 ETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPET 997 (1045)
Q Consensus 918 ~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~~~~~ 997 (1045)
.+.+..+.+..+|.+++++++ +-.+++.+...++++|+++++
T Consensus 130 ~~~~~~~~~~~~g~~~i~~~~--------------------------------------d~~~~~~~~~~~~~~~g~~~~ 171 (287)
T 3a1c_A 130 EVELALEKLEREAKTAVIVAR--------------------------------------NGRVEGIIAVSDTLKESAKPA 171 (287)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE--------------------------------------TTEEEEEEEEECCBCTTHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEeccccchhHHHH
Confidence 455566788889999999882 347789999999999999999
Q ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 998 IAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 998 I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
|+.|+++|+++.++||+....+..+.+.+|+-
T Consensus 172 l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 203 (287)
T 3a1c_A 172 VQELKRMGIKVGMITGDNWRSAEAISRELNLD 203 (287)
T ss_dssp HHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred HHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999974
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0046 Score=59.76 Aligned_cols=105 Identities=16% Similarity=0.296 Sum_probs=74.6
Q ss_pred CChhHHHHHHHHHHc-CeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHh
Q psy15803 831 SSPDEKALILGAKAF-GYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRL 909 (1045)
Q Consensus 831 g~p~e~all~~a~~~-g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~ 909 (1045)
..|...|++++|+.. |..+. ..... .....+|++..++..|.+ +| .-+.+|+++.|..++
T Consensus 50 eHPla~AIv~~A~~~~~l~~~------------~~~~~--~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~~l~ 110 (156)
T 1svj_A 50 ETPEGRSIVILAKQRFNLRER------------DVQSL--HATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHV 110 (156)
T ss_dssp CSHHHHHHHHHHHHHTTCCCC------------CHHHH--TCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCcc------------ccccc--ccceeeccccCCCCeEEE---CC--EEEEEeCcHHHHHHH
Confidence 479999999999875 53211 00000 012468999888778754 44 357799998887766
Q ss_pred ccC-chhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecC
Q psy15803 910 DSH-SKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVED 988 (1045)
Q Consensus 910 ~~~-~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d 988 (1045)
... ....+.+.+..+.++.+|.+++.+| .|-.++|++++.|
T Consensus 111 ~~~gi~~~~~~~~~~~~la~~G~T~v~VA--------------------------------------~d~~l~GvIalaD 152 (156)
T 1svj_A 111 EANGGHFPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALKD 152 (156)
T ss_dssp HHHTCCCCHHHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEEE
T ss_pred HHcCCCCcHHHHHHHHHHHhCCCCEEEEE--------------------------------------ECCEEEEEEEEec
Confidence 431 1223457788899999999999999 3567999999999
Q ss_pred ccCc
Q psy15803 989 KLQE 992 (1045)
Q Consensus 989 ~lr~ 992 (1045)
++|+
T Consensus 153 ~iK~ 156 (156)
T 1svj_A 153 IVKG 156 (156)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9996
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0022 Score=63.20 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=53.9
Q ss_pred CcccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch----hhhHHHHHH
Q psy15803 579 SPLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ----FRFLLKLLF 647 (1045)
Q Consensus 579 sP~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~----f~~l~~lll 647 (1045)
.+.+|...++.+.+..| ..++|+||+.||.+|++.|++++++ .+.+..++.++.+...++ ++.+.+.++
T Consensus 80 g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~~il 156 (168)
T 3ewi_A 80 SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAIREFAEHIF 156 (168)
T ss_dssp SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHHHHHHHHHH
Confidence 35789988887776533 5699999999999999999999988 577888888887775432 566666664
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0028 Score=72.70 Aligned_cols=73 Identities=25% Similarity=0.312 Sum_probs=59.5
Q ss_pred cccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHHhhcchh
Q psy15803 580 PLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVHGSWN 653 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~ 653 (1045)
+..|.++++.+.+..| ..++|||||.||.+|+++|++|+.+.+.+..++.++..+..+++..+..++ ..+|.-
T Consensus 321 ~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~~~~~~~~~~ad~~i~~~~l~~ll~~l-~~~~~~ 396 (415)
T 3p96_A 321 RAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAKPALREVADASLSHPYLDTVLFLL-GVTRGE 396 (415)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCSEEECSSCTTHHHHHT-TCCHHH
T ss_pred CcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEECCCHHHHHhCCEEEccCCHHHHHHHh-CCCHHH
Confidence 5677777766655433 569999999999999999999999988888888999999999999998887 444443
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.003 Score=69.36 Aligned_cols=67 Identities=22% Similarity=0.341 Sum_probs=53.6
Q ss_pred cccHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHH
Q psy15803 580 PLQKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
+..|.++++.+.+.. ...++||||+.||.+|.++|++|+.+.+.+..++.++.++..+++..|.++|
T Consensus 244 ~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~~~~~~~~~a~~~i~~~~L~~ll~~L 313 (317)
T 4eze_A 244 AANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIHHQINYHGFELLLFLI 313 (317)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCCEEESSSCGGGGGGGT
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeCCCHHHHHhcCeeeCCCCHHHHHHHH
Confidence 356666665554432 3569999999999999999999998877788888888888888888887766
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0025 Score=65.33 Aligned_cols=70 Identities=26% Similarity=0.377 Sum_probs=55.2
Q ss_pred cccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHHhh
Q psy15803 580 PLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVH 649 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll~~ 649 (1045)
+..|...++.+.+..| ..++|+||+.||++|+++|++++++.+.+..++.++.+...++|+.+..++-.|
T Consensus 140 ~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 140 SHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFNAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp TTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEESCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred CCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEECccHHHHHhcceeecccCHHHHHHHhccc
Confidence 4567777766654423 568999999999999999999999988888888999998999999998887433
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0027 Score=68.72 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=54.3
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch----hhhHHHHHHhhcch
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ----FRFLLKLLFVHGSW 652 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~----f~~l~~lll~~Gr~ 652 (1045)
..|..-++.+.+..| .-|+++||+.||.+|++.|++|+++ .+.+..+++++.+....+ ...|.++++..+++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~~ 280 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQRK 280 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhcCcc
Confidence 669888888776644 4699999999999999999999988 567888888776664433 33455666556666
Q ss_pred hhhhhhh
Q psy15803 653 NYNRMCL 659 (1045)
Q Consensus 653 ~~~~i~~ 659 (1045)
-|.+-..
T Consensus 281 ~~~~~~~ 287 (290)
T 3dnp_A 281 GFLDKFH 287 (290)
T ss_dssp -------
T ss_pred cHHhHhc
Confidence 6655443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0037 Score=65.12 Aligned_cols=70 Identities=17% Similarity=0.105 Sum_probs=52.1
Q ss_pred ecCc--ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 577 RVSP--LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 577 r~sP--~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.+.| ..|...++.+.+..| ..++++|||.||.+|++.|++|+++ .+.+..+++++.+....+-..+.++|
T Consensus 146 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l 221 (227)
T 1l6r_A 146 HLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 221 (227)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHH
Confidence 3446 789999988876533 4699999999999999999999977 45666777776666555444455554
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0032 Score=68.59 Aligned_cols=46 Identities=11% Similarity=0.127 Sum_probs=43.2
Q ss_pred cCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCC
Q psy15803 987 EDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQD 1032 (1045)
Q Consensus 987 ~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~ 1032 (1045)
.+++||+++++++.|+++|++++|+|||+..++.++|+++|+..++
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~ 184 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSN 184 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTT
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCccc
Confidence 5799999999999999999999999999999999999999987554
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0063 Score=65.34 Aligned_cols=75 Identities=27% Similarity=0.340 Sum_probs=51.9
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhh----HHHHH
Q psy15803 577 RVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRF----LLKLL 646 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~----l~~ll 646 (1045)
...|. .|..-++.+.+..| .-|+++||+.||.+|++.|++||++ .+.+..+++++.+....+=.. |.+++
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~ 269 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIF 269 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHH
Confidence 45554 78888887776533 4599999999999999999999987 567888888877665544333 34444
Q ss_pred Hhhcc
Q psy15803 647 FVHGS 651 (1045)
Q Consensus 647 l~~Gr 651 (1045)
+.+|+
T Consensus 270 ~~~~~ 274 (279)
T 4dw8_A 270 NVEGH 274 (279)
T ss_dssp -----
T ss_pred hcccc
Confidence 44444
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0079 Score=64.15 Aligned_cols=67 Identities=28% Similarity=0.300 Sum_probs=51.6
Q ss_pred cccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 580 PLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
+..|..-++.+.+..| .-++++||+.||.+|++.|++||++ .+.+..+++++.+....+=..+.+.|
T Consensus 192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l 262 (268)
T 3r4c_A 192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKAL 262 (268)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHH
Confidence 3578888888776644 4599999999999999999999988 57788888877766555544455554
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.023 Score=60.66 Aligned_cols=53 Identities=25% Similarity=0.245 Sum_probs=49.9
Q ss_pred CeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 977 KLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 977 ~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+..++|.+.+.++++++++++++.|++.|+++.++||+....+..+.+++|+-
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~ 184 (280)
T 3skx_A 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD 184 (280)
T ss_dssp TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh
Confidence 45678999999999999999999999999999999999999999999999984
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=94.69 E-value=0.0018 Score=69.24 Aligned_cols=53 Identities=11% Similarity=0.231 Sum_probs=49.8
Q ss_pred CeEEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 977 KLHLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 977 ~l~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+-.+.|.+.+.|+++|+++++|+.|++.|++++|+|||+..++..+++++||-
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~ 176 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ 176 (263)
Confidence 44678999999999999999999999999999999999999999999999974
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.0095 Score=64.23 Aligned_cols=66 Identities=18% Similarity=0.202 Sum_probs=51.0
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..|..-++.+.+..| .-|+++||+.||.+|++.|++||++ ++.+..+++++.+....+=..+.++|
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l 279 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVL 279 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHH
Confidence 459998888877644 4599999999999999999999988 57788888887766555544444444
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.011 Score=64.39 Aligned_cols=67 Identities=21% Similarity=0.280 Sum_probs=50.7
Q ss_pred cccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 580 PLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
+..|..-++.+.+..| .-|+++||+.||.+|++.|++||++ .+.+..+++++.+....+=..+.+.|
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l 296 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVI 296 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHH
Confidence 3679988888776644 4599999999999999999999988 57788888887766544433344444
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.009 Score=64.12 Aligned_cols=62 Identities=19% Similarity=0.305 Sum_probs=43.3
Q ss_pred ecCc--ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch
Q psy15803 577 RVSP--LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ 638 (1045)
Q Consensus 577 r~sP--~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~ 638 (1045)
...| -.|..-++.+.+..| .-++++||+.||.+|++.|++||++ .+.+..+++++.+....+
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~ 257 (279)
T 3mpo_A 190 EVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNA 257 (279)
T ss_dssp EEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC----
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCC
Confidence 4444 459988888776644 4599999999999999999999988 577778888776654433
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=95.36 E-value=0.012 Score=62.30 Aligned_cols=65 Identities=22% Similarity=0.208 Sum_probs=48.2
Q ss_pred cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 582 QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 582 qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.|..-++.+.+..| .-|+++||+.||.+|++.|++||++ ++.+..+++++.+....+=..+.++|
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i 251 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGL 251 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHH
Confidence 58887777765433 4699999999999999999999977 46677777777665555544555555
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=95.33 E-value=0.012 Score=59.07 Aligned_cols=62 Identities=23% Similarity=0.432 Sum_probs=49.2
Q ss_pred ecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHH
Q psy15803 577 RVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 577 r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
...|..|...++.+ . ...++|+||+.||.+|++.|++|+++..... .+++..+++..+.++|
T Consensus 135 ~~~~~~k~~~l~~l--~-~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 135 RLRFRDKGEFLKRF--R-DGFILAMGDGYADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDFI 196 (201)
T ss_dssp ECCSSCHHHHHGGG--T-TSCEEEEECTTCCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHHH
T ss_pred cCCccCHHHHHHhc--C-cCcEEEEeCCHHHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHHH
Confidence 45678899988888 2 6679999999999999999999998743322 5667777888877766
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=95.30 E-value=0.008 Score=60.98 Aligned_cols=66 Identities=27% Similarity=0.356 Sum_probs=45.5
Q ss_pred cccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHH
Q psy15803 580 PLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKL 645 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~l 645 (1045)
+..|...+..+.+..| ..++|+||+.||.+|++.|++++++.+.+..++.++.++..+++..|..+
T Consensus 141 ~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 141 ENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp TTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEESCCHHHHTTCSEEECSSCGGGGGGG
T ss_pred CccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEECCCHHHHhhcceeecchhHHHHHHh
Confidence 4577776655544323 45999999999999999999999887666555555554443346666543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.17 E-value=0.015 Score=62.02 Aligned_cols=66 Identities=21% Similarity=0.264 Sum_probs=49.2
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..|..-++.+.+..| .-++++||+.||.+|++.|++||++ .+.+..+++++.+....+=..+.+.|
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l 268 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKEL 268 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHH
Confidence 458887777665433 4699999999999999999999977 56677787777666555544455555
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=95.10 E-value=0.01 Score=62.24 Aligned_cols=44 Identities=16% Similarity=0.236 Sum_probs=37.7
Q ss_pred ecCcc--cHHHHHHHHHhcCCCEEEEecCCccChHHHHhc--cccccccC
Q psy15803 577 RVSPL--QKAEVVELVTVNTNSVTLAIGDGANDVAMIQKA--HVGVGISG 622 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~A--dVGigi~g 622 (1045)
.+.|. .|..-++.+.+..| |+++||+.||.+||+.| +.||++..
T Consensus 153 ei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~N 200 (239)
T 1u02_A 153 ELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGE 200 (239)
T ss_dssp EEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESS
T ss_pred EEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECC
Confidence 44454 79999999998867 99999999999999999 99998744
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=95.00 E-value=0.021 Score=61.47 Aligned_cols=52 Identities=27% Similarity=0.344 Sum_probs=43.7
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhcc
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACAS 632 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~ 632 (1045)
..|..-++.+.+..| .-++++||+.||.+|++.|++||++ ++.+..+++++.
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~ 263 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPE 263 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTT
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCC
Confidence 569988888876645 4699999999999999999999988 577888888774
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=94.85 E-value=0.031 Score=56.64 Aligned_cols=68 Identities=19% Similarity=0.173 Sum_probs=50.9
Q ss_pred cCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHH
Q psy15803 578 VSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 578 ~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
-.|..|...++.+... ...++||||+.||++|.+.|++++.+.+.+..++.+.-....+++..+.++|
T Consensus 129 p~p~~~~~~l~~l~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 129 RQKDPKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp CSSSHHHHHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEECSHHHHHHHH
T ss_pred CCCchHHHHHHHHHhc-CCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhccccchHHHHHHH
Confidence 5678899999988876 7789999999999999999999987654443333332222367777777766
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.77 E-value=0.02 Score=61.68 Aligned_cols=70 Identities=21% Similarity=0.205 Sum_probs=49.3
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 577 RVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.+.|. .|...++.+.+..| ..++++||+.||.+|++.|++|+++ .+.+..+++++.+....+-..+.++|
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l 266 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAI 266 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHH
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHH
Confidence 44554 89998888876533 4699999999999999999999987 45566666666555443333344444
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=94.50 E-value=0.18 Score=48.69 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=31.2
Q ss_pred CCEEEEecCCccChHHHHhccccccc-cCchhhhhhhcccccc
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSI 636 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~ 636 (1045)
...++|+||+.||.+|.++|++++.+ .+.+..++.++.++..
T Consensus 100 ~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~ 142 (162)
T 2p9j_A 100 DEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142 (162)
T ss_dssp GGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSS
T ss_pred HHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecC
Confidence 35699999999999999999998855 4555555555544433
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.08 E-value=0.046 Score=58.92 Aligned_cols=65 Identities=20% Similarity=0.287 Sum_probs=46.1
Q ss_pred cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 582 QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 582 qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.|..-++.+.+..| ..++++||+.||.+|++.|++|+++ .+.+..++.++.+....+=..+.++|
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i 284 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMM 284 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHH
Confidence 68888877776544 4699999999999999999999977 35565666666555444333344443
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=94.06 E-value=0.036 Score=59.15 Aligned_cols=67 Identities=19% Similarity=0.255 Sum_probs=47.5
Q ss_pred cccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 580 PLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
...|...++.+.+..| ..++++||+.||.+|++.|++|+++ .+.+..++.++.+....+-..+.++|
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l 259 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVI 259 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHH
Confidence 3478888887766533 4699999999999999999999977 45566666666555444333344444
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.04 E-value=0.039 Score=59.97 Aligned_cols=66 Identities=17% Similarity=0.227 Sum_probs=47.7
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhcccccccc-Cchhhhhhhccccc-cchhhhHHHHH
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAACASDYS-IGQFRFLLKLL 646 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi~-g~e~a~~a~~~~~~-~~~f~~l~~ll 646 (1045)
..|...++.+.+..| .-++++||+.||.+|++.|++|+++. +.+..++.++.+.. ..+-..+.++|
T Consensus 223 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l 293 (301)
T 2b30_A 223 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLL 293 (301)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHH
Confidence 379998888876544 46899999999999999999999774 55666666665554 43333444444
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=93.81 E-value=0.03 Score=59.72 Aligned_cols=70 Identities=19% Similarity=0.267 Sum_probs=49.8
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 577 RVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.+.|. .|...++.+.+..| ..++++||+.||.+|++.|++|+++ .+.+..++.++.+....+-..+.++|
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i 258 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVL 258 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHH
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHH
Confidence 34454 79988888776433 5699999999999999999999976 45555566666655544444455555
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=93.80 E-value=0.021 Score=60.18 Aligned_cols=49 Identities=16% Similarity=0.131 Sum_probs=37.4
Q ss_pred ccHHHHHHHHHhc----CCCEEEEecCCccChHHHHhcccccccc-Cc-hhhhhh
Q psy15803 581 LQKAEVVELVTVN----TNSVTLAIGDGANDVAMIQKAHVGVGIS-GV-EGLQAA 629 (1045)
Q Consensus 581 ~qK~~iV~~lq~~----~g~~v~~iGDG~ND~~al~~AdVGigi~-g~-e~a~~a 629 (1045)
-.|..-++.+.+. ...-|+++|||.||.+|++.|++||++. +. +..++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~ 232 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNV 232 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEE
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchh
Confidence 4688888777655 3467999999999999999999999773 43 334443
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=93.76 E-value=0.053 Score=56.86 Aligned_cols=48 Identities=23% Similarity=0.325 Sum_probs=37.7
Q ss_pred cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhh
Q psy15803 582 QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAA 629 (1045)
Q Consensus 582 qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a 629 (1045)
.|..-++.+.+..| ..++++||+.||.+|++.|++|+++ .+.+..++.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~ 213 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHW 213 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHH
Confidence 68888877776544 4699999999999999999999977 455555553
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=93.74 E-value=0.045 Score=55.52 Aligned_cols=69 Identities=20% Similarity=0.166 Sum_probs=43.2
Q ss_pred cCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHh--ccccccccC-chhhhhhhccccccchhhhHHHHH
Q psy15803 578 VSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQK--AHVGVGISG-VEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 578 ~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~--AdVGigi~g-~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..|..|.+.+.....-....++|+||+.||.+|++. +.+|++... .........+++..+++..|.++|
T Consensus 147 ~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 147 GACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp STTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred CCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 345667666655433236789999999999999864 224444322 211122334677778888887766
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=93.59 E-value=0.15 Score=52.56 Aligned_cols=44 Identities=14% Similarity=0.105 Sum_probs=34.1
Q ss_pred cccHHHHHHHHHhcCC------CEEEEecCCccChHHHHhccccccccCc
Q psy15803 580 PLQKAEVVELVTVNTN------SVTLAIGDGANDVAMIQKAHVGVGISGV 623 (1045)
Q Consensus 580 P~qK~~iV~~lq~~~g------~~v~~iGDG~ND~~al~~AdVGigi~g~ 623 (1045)
+..|...++.+.+..| ..++++||+.||.+|++.|++++.+...
T Consensus 157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp THHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred chHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 4567777765544324 5799999999999999999999977544
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=93.45 E-value=0.044 Score=54.89 Aligned_cols=56 Identities=14% Similarity=0.060 Sum_probs=38.3
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhcccccc
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSI 636 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~ 636 (1045)
..|...++.+.+..| ..++||||+.||.+|.+.|++++.+ .+.+..++.++.++..
T Consensus 100 kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~ 159 (188)
T 2r8e_A 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159 (188)
T ss_dssp SCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSS
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeC
Confidence 445666655544323 5799999999999999999999855 3555555555544433
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=92.98 E-value=0.064 Score=55.63 Aligned_cols=55 Identities=16% Similarity=0.181 Sum_probs=40.5
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccc
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYS 635 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~ 635 (1045)
..|...++.+.+..| ..++++||+.||.+|++.|++|+++ .+.+..++.++.+..
T Consensus 152 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~ 210 (231)
T 1wr8_A 152 INKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTK 210 (231)
T ss_dssp CCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECS
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCHHHHhhCCEEec
Confidence 468888877765423 4699999999999999999999976 355555555554443
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=92.56 E-value=0.091 Score=55.50 Aligned_cols=44 Identities=18% Similarity=0.304 Sum_probs=37.5
Q ss_pred ccHHHHHHHHHhcCC-----CEEEEecCCccChHHHHhcccccccc-Cch
Q psy15803 581 LQKAEVVELVTVNTN-----SVTLAIGDGANDVAMIQKAHVGVGIS-GVE 624 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g-----~~v~~iGDG~ND~~al~~AdVGigi~-g~e 624 (1045)
..|..-++.+.+..| ..++++||+.||.+|++.|++|+++. +.+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~ 224 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP 224 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh
Confidence 689998888877655 56999999999999999999999884 445
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=92.45 E-value=0.1 Score=55.16 Aligned_cols=64 Identities=23% Similarity=0.375 Sum_probs=43.5
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhh--HHHHH
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRF--LLKLL 646 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~--l~~ll 646 (1045)
..|...++.+.+..| .-++++||+.||.+|++.|++|+++ .+.+..++.++.+ .++... +.++|
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v--~~~~~~dGv~~~l 255 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV--TAPIDEDGISKAM 255 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEE--CCCGGGTHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEE--eccCchhhHHHHH
Confidence 467777776665433 4689999999999999999999966 3444445544443 334444 55555
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=91.60 E-value=0.12 Score=55.57 Aligned_cols=72 Identities=21% Similarity=0.199 Sum_probs=49.5
Q ss_pred EEecCc--ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 575 CCRVSP--LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 575 ~~r~sP--~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
+....| ..|...++.+.+..| ..++++||+.||.+|++.|++|+++ .+.+..++.++.+...++-..+.++|
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~ 279 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLITDSEYSKGITNTL 279 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCBCSSCHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEEcCCCCcCHHHHHH
Confidence 344444 467777776665433 4699999999999999999999977 45566666666555444444455544
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=91.54 E-value=0.058 Score=60.54 Aligned_cols=100 Identities=15% Similarity=0.147 Sum_probs=59.5
Q ss_pred CCchhHHHHHHHHHHHHHhhhhh--------hHHHHHHHcCCCCC--CceEEEechhhHHHhhHHHHHHHHHHhhcCCcE
Q psy15803 504 IEPVVREFLTMLAVCHTVYIELK--------HRTALASLLGTTNN--NYALIIDGLALDYALKHELRKDFLELCLTCNAV 573 (1045)
Q Consensus 504 ~~~~~~~~~~ti~~~~~~~~~~~--------~~~~~~~~lG~~~~--~~~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~v 573 (1045)
+-.+.+++.+.++.+++.|+++. ....+++.+|.... ... |+ |..+.... ...
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~-Vi-g~~l~~~~---------------dG~ 281 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEK-VL-GLRLMKDD---------------EGK 281 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGG-EE-EECEEECT---------------TCC
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcce-EE-EeEEEEec---------------CCc
Confidence 34567888999999999999843 33466888774321 000 11 11111000 001
Q ss_pred EEEec-------CcccHHHHHHHHHh-cC-CCEEEEecCCccChHHHHh-ccccccc
Q psy15803 574 ICCRV-------SPLQKAEVVELVTV-NT-NSVTLAIGDGANDVAMIQK-AHVGVGI 620 (1045)
Q Consensus 574 v~~r~-------sP~qK~~iV~~lq~-~~-g~~v~~iGDG~ND~~al~~-AdVGigi 620 (1045)
+..+. -.+.|...++.+-. .. ...++|+|||.||.+||++ +|+|+|+
T Consensus 282 ~tg~~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 282 ILPKFDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp EEEEECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred eeeeecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 22222 24568888876532 21 2457889999999999997 7777754
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=90.13 E-value=0.22 Score=51.56 Aligned_cols=64 Identities=16% Similarity=0.175 Sum_probs=45.6
Q ss_pred cHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCc-hhhhhhhccccccchhhhHHHHH
Q psy15803 582 QKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGV-EGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 582 qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~-e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
+|..+++.+.-. ...++||||+.||+.|.++|++.+...+. +........++..++|..|..+|
T Consensus 151 ~K~~~~~~~~~~-~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 151 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred cHHHHHHHHhcc-CCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeecCCHHHHHHHH
Confidence 577888877654 67899999999999999999887742222 11111112677788888888777
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=89.77 E-value=0.18 Score=51.85 Aligned_cols=52 Identities=21% Similarity=0.268 Sum_probs=38.2
Q ss_pred CCEEEEecCCccChHHHHhccc---ccccc-CchhhhhhhccccccchhhhHHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHV---GVGIS-GVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdV---Gigi~-g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
...++|+||+.||+.|.++|++ +|... +.........+++..+++..|.++|
T Consensus 177 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 177 PERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAV 232 (237)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHH
T ss_pred HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 3569999999999999999999 55432 2212222335788889999998887
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=89.70 E-value=0.15 Score=53.94 Aligned_cols=54 Identities=17% Similarity=0.264 Sum_probs=39.0
Q ss_pred ccHHHHHHHHHhcCCCEEEEecC----CccChHHHHhcc-ccccc-cCchhhhhhhcccc
Q psy15803 581 LQKAEVVELVTVNTNSVTLAIGD----GANDVAMIQKAH-VGVGI-SGVEGLQAACASDY 634 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g~~v~~iGD----G~ND~~al~~Ad-VGigi-~g~e~a~~a~~~~~ 634 (1045)
-.|..-++.|..-...-|+++|| |.||.+||+.|+ +|+|+ ++.+..++.++.+.
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~ 255 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 255 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeC
Confidence 35888787772122467999999 999999999998 58888 34566666655443
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=89.48 E-value=0.09 Score=53.92 Aligned_cols=66 Identities=27% Similarity=0.320 Sum_probs=44.3
Q ss_pred ccHHHHHHHHHhcCC-CEEEEecCCccChHHHHhccccccccCc-hhhhhhhccccccchhhhHHHHH
Q psy15803 581 LQKAEVVELVTVNTN-SVTLAIGDGANDVAMIQKAHVGVGISGV-EGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g-~~v~~iGDG~ND~~al~~AdVGigi~g~-e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..|..+++.+.+..| ..++||||+.||+.|.++|+++|++... .........++..+++..|..+|
T Consensus 156 ~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 156 GGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp THHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred CchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 467777766554424 5799999999999999999997776432 11222345677777777776544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=89.33 E-value=0.13 Score=54.86 Aligned_cols=45 Identities=22% Similarity=0.355 Sum_probs=34.6
Q ss_pred ecCcc--cHHHHHHHHHhcCC----CE--EEEecCCccChHHHHhcccccccc
Q psy15803 577 RVSPL--QKAEVVELVTVNTN----SV--TLAIGDGANDVAMIQKAHVGVGIS 621 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~g----~~--v~~iGDG~ND~~al~~AdVGigi~ 621 (1045)
.+.|. .|..-++.+.+..| .- ++++||+.||.+|++.|++||++.
T Consensus 182 eI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~ 234 (275)
T 1xvi_A 182 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK 234 (275)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC
T ss_pred EEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec
Confidence 34443 68887777665423 34 999999999999999999999883
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=88.90 E-value=0.19 Score=50.56 Aligned_cols=56 Identities=20% Similarity=0.150 Sum_probs=41.9
Q ss_pred CEEEEecCCccChHHHHhccc-ccccc-CchhhhhhhccccccchhhhHHHHHHhhcchh
Q psy15803 596 SVTLAIGDGANDVAMIQKAHV-GVGIS-GVEGLQAACASDYSIGQFRFLLKLLFVHGSWN 653 (1045)
Q Consensus 596 ~~v~~iGDG~ND~~al~~AdV-Gigi~-g~e~a~~a~~~~~~~~~f~~l~~lll~~Gr~~ 653 (1045)
..++|+||+.||..|.++|.+ +|++. |.+..++ .+++..+++..|..++-.+++..
T Consensus 145 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~--~ad~v~~~~~el~~~~~~~~~~~ 202 (205)
T 3m9l_A 145 SRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPE--LTDWHARDCAQLRDLLSAEGHHH 202 (205)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGG--GCSEECSSHHHHHHHHHHTTCC-
T ss_pred HHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccc--cCCEEeCCHHHHHHHHHhccccc
Confidence 569999999999999999999 88773 4333333 36778889999998885554433
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=87.54 E-value=0.29 Score=49.80 Aligned_cols=77 Identities=18% Similarity=0.271 Sum_probs=49.9
Q ss_pred CcEEEEecCc--ccHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccc-ccc-C--chhhhhhhccccccchhhh
Q psy15803 571 NAVICCRVSP--LQKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGV-GIS-G--VEGLQAACASDYSIGQFRF 641 (1045)
Q Consensus 571 ~~vv~~r~sP--~qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGi-gi~-g--~e~a~~a~~~~~~~~~f~~ 641 (1045)
..++.+...+ ..|...++.+.+.. ...++++||+.||..|.++|++.. ++. | .........+++..+++..
T Consensus 130 ~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~e 209 (226)
T 3mc1_A 130 DAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDE 209 (226)
T ss_dssp SEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHH
T ss_pred eeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHH
Confidence 4455555443 33555554444332 257999999999999999999833 332 2 2222223567888899999
Q ss_pred HHHHHH
Q psy15803 642 LLKLLF 647 (1045)
Q Consensus 642 l~~lll 647 (1045)
|.+++.
T Consensus 210 l~~~~~ 215 (226)
T 3mc1_A 210 LHKKIL 215 (226)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999884
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=87.25 E-value=0.35 Score=50.83 Aligned_cols=51 Identities=16% Similarity=0.275 Sum_probs=35.4
Q ss_pred CEEEEecCCccChHHHHhccccc-ccc-Cchh-----------------------hh--hhhccccccchhhhHHHHH
Q psy15803 596 SVTLAIGDGANDVAMIQKAHVGV-GIS-GVEG-----------------------LQ--AACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 596 ~~v~~iGDG~ND~~al~~AdVGi-gi~-g~e~-----------------------a~--~a~~~~~~~~~f~~l~~ll 646 (1045)
..++|+||+.||..|++.|+++. ++. |... .. ....+++..+++..|..+|
T Consensus 179 ~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l 256 (267)
T 1swv_A 179 NHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVM 256 (267)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred cCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHH
Confidence 56999999999999999999542 332 2110 11 1234677788888888877
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=87.04 E-value=0.19 Score=52.52 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=33.5
Q ss_pred cHHHHHHHHHhcCCCEEEEecC----CccChHHHHhccc-cccc-cCchhhhhhhcc
Q psy15803 582 QKAEVVELVTVNTNSVTLAIGD----GANDVAMIQKAHV-GVGI-SGVEGLQAACAS 632 (1045)
Q Consensus 582 qK~~iV~~lq~~~g~~v~~iGD----G~ND~~al~~AdV-Gigi-~g~e~a~~a~~~ 632 (1045)
.|..-++.+..-...-|+++|| |.||.+||+.|+. |+++ ++.+..++.++.
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~ 244 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELL 244 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHH
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhh
Confidence 4666555551112467999999 9999999998866 8877 445666666543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=86.48 E-value=0.32 Score=49.25 Aligned_cols=76 Identities=12% Similarity=0.056 Sum_probs=44.7
Q ss_pred CcEEEEecCcccH--HHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccc-c-Cchhh-hhhhccccccchhhhH
Q psy15803 571 NAVICCRVSPLQK--AEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGI-S-GVEGL-QAACASDYSIGQFRFL 642 (1045)
Q Consensus 571 ~~vv~~r~sP~qK--~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi-~-g~e~a-~~a~~~~~~~~~f~~l 642 (1045)
..++++...+..| ...++.+.+.. ...++++||+.||.+|++.|++++.. . |.... .....+++..+++..|
T Consensus 138 ~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el 217 (226)
T 1te2_A 138 DALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 217 (226)
T ss_dssp SEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred cEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHH
Confidence 4455554444344 44444333221 35689999999999999999998733 2 21111 1233456666777766
Q ss_pred HHHH
Q psy15803 643 LKLL 646 (1045)
Q Consensus 643 ~~ll 646 (1045)
..-+
T Consensus 218 ~~~~ 221 (226)
T 1te2_A 218 TAKD 221 (226)
T ss_dssp CHHH
T ss_pred hHHH
Confidence 6544
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=86.20 E-value=0.35 Score=54.17 Aligned_cols=41 Identities=5% Similarity=0.060 Sum_probs=39.0
Q ss_pred CccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc
Q psy15803 988 DKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRL 1028 (1045)
Q Consensus 988 d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi 1028 (1045)
.+++|++++.|+.||++|++|+++||.....+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 45799999999999999999999999999999999999986
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=85.99 E-value=0.25 Score=49.08 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=34.7
Q ss_pred CCEEEEecCCccChHHHHhcccc-ccccCchhhhhhhccccccchhhhHHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVG-VGISGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVG-igi~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
...++++||+.||.+|++.|+++ +++.... . .+++..+++..|.++|
T Consensus 157 ~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 157 SDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRIF 204 (207)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHHT
T ss_pred cccEEEECCCHHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHHH
Confidence 35689999999999999999997 5664222 1 3566667777776655
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=85.72 E-value=0.29 Score=49.59 Aligned_cols=51 Identities=27% Similarity=0.346 Sum_probs=33.1
Q ss_pred CEEEEecCCccChHHHHhccccc-ccc-Cchhhhh--hhccccccchhhhHHHHH
Q psy15803 596 SVTLAIGDGANDVAMIQKAHVGV-GIS-GVEGLQA--ACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 596 ~~v~~iGDG~ND~~al~~AdVGi-gi~-g~e~a~~--a~~~~~~~~~f~~l~~ll 646 (1045)
..++++||+.||..|++.|++++ ++. |.....+ ...+++..+++..|..+|
T Consensus 163 ~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 163 EEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC---
T ss_pred HHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhh
Confidence 46899999999999999999976 432 2222222 123567777777776666
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=85.48 E-value=0.22 Score=50.15 Aligned_cols=51 Identities=22% Similarity=0.146 Sum_probs=33.9
Q ss_pred CCEEEEecCCccChHHHHhccccc-ccc-CchhhhhhhccccccchhhhHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGV-GIS-GVEGLQAACASDYSIGQFRFLLKL 645 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGi-gi~-g~e~a~~a~~~~~~~~~f~~l~~l 645 (1045)
...+++|||+.||..|.+.|++++ ++. |.....+....++..+++..|..+
T Consensus 155 ~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 155 PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 207 (209)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred cccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHHh
Confidence 356999999999999999999887 333 321122222256666677666554
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=85.07 E-value=0.55 Score=47.98 Aligned_cols=46 Identities=15% Similarity=0.155 Sum_probs=33.4
Q ss_pred EEEEecCCccChHHHHhccc-cccccCchhhhhhhccccccchhhhHHHHH
Q psy15803 597 VTLAIGDGANDVAMIQKAHV-GVGISGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 597 ~v~~iGDG~ND~~al~~AdV-Gigi~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.+++|||+.||+.|.++|.+ +|.+...+. ...++..++|..|.++|
T Consensus 179 ~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 179 EVFFIGDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp TEEEEESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 68999999999999999997 446533222 34566778888888777
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=84.75 E-value=0.34 Score=49.51 Aligned_cols=52 Identities=21% Similarity=0.245 Sum_probs=37.8
Q ss_pred CCEEEEecCCccChHHHHhcccc-cccc-CchhhhhhhccccccchhhhHHHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVG-VGIS-GVEGLQAACASDYSIGQFRFLLKLLF 647 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVG-igi~-g~e~a~~a~~~~~~~~~f~~l~~lll 647 (1045)
...+++|||+.||..|.++|++. |++. |...... ...++..+++..|.+++.
T Consensus 156 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l~ 209 (222)
T 2nyv_A 156 PEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLMD 209 (222)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHHH
T ss_pred chhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHHH
Confidence 45689999999999999999987 4553 2211111 556777888888888773
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=84.61 E-value=0.91 Score=46.67 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=39.1
Q ss_pred cCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 987 EDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 987 ~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
...+.+.+.++|++|++.|++++++||+....+..+++++|+-
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~ 62 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN 62 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC
Confidence 3467889999999999999999999999999999999999863
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=84.37 E-value=0.47 Score=48.34 Aligned_cols=56 Identities=23% Similarity=0.186 Sum_probs=39.3
Q ss_pred CEEEEecCCccChHHHHhccc-ccccc-Cchhhh--hhhccccccchhhhHHHHHHhhcc
Q psy15803 596 SVTLAIGDGANDVAMIQKAHV-GVGIS-GVEGLQ--AACASDYSIGQFRFLLKLLFVHGS 651 (1045)
Q Consensus 596 ~~v~~iGDG~ND~~al~~AdV-Gigi~-g~e~a~--~a~~~~~~~~~f~~l~~lll~~Gr 651 (1045)
.-+++|||+.||..|.++|.+ +|++. |..... ....+++..+++..|..+|-.+++
T Consensus 165 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 224 (233)
T 3s6j_A 165 DECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIAS 224 (233)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGTCC
T ss_pred HHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHHhh
Confidence 569999999999999999998 23442 211111 223478888999999988844444
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=84.37 E-value=0.47 Score=48.85 Aligned_cols=76 Identities=16% Similarity=0.237 Sum_probs=49.3
Q ss_pred CcEEEEecCc--ccHHHHHHHHHhcC----CCEEEEecCCccChHHHHhccccc-ccc-Cc--hhhhhhhccccccchhh
Q psy15803 571 NAVICCRVSP--LQKAEVVELVTVNT----NSVTLAIGDGANDVAMIQKAHVGV-GIS-GV--EGLQAACASDYSIGQFR 640 (1045)
Q Consensus 571 ~~vv~~r~sP--~qK~~iV~~lq~~~----g~~v~~iGDG~ND~~al~~AdVGi-gi~-g~--e~a~~a~~~~~~~~~f~ 640 (1045)
..++++...+ ..|...++.+.+.. ...+++|||+.||+.|.++|++.. ++. |. ........+++..+++.
T Consensus 154 ~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~ 233 (240)
T 3sd7_A 154 KYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVE 233 (240)
T ss_dssp SEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSST
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHH
Confidence 4556555444 33555555444332 346899999999999999999833 443 22 22222356788888998
Q ss_pred hHHHHH
Q psy15803 641 FLLKLL 646 (1045)
Q Consensus 641 ~l~~ll 646 (1045)
.|.++|
T Consensus 234 el~~~l 239 (240)
T 3sd7_A 234 SIKDIL 239 (240)
T ss_dssp THHHHH
T ss_pred HHHHHh
Confidence 888876
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=84.27 E-value=0.51 Score=47.99 Aligned_cols=51 Identities=14% Similarity=0.277 Sum_probs=36.2
Q ss_pred CCEEEEecCCccChHHHHhcccc-ccccC-chh-------hhhhhccccccchhhhHHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVG-VGISG-VEG-------LQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVG-igi~g-~e~-------a~~a~~~~~~~~~f~~l~~ll 646 (1045)
...++++||+.||..|.+.|+++ +++.. .+. .++ ..+++..+++..|..+|
T Consensus 160 ~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~-~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 160 PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTD-AGAETVISRMQDLPAVI 219 (229)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHH-HTCSEEESCGGGHHHHH
T ss_pred hhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhh-cCCceeecCHHHHHHHH
Confidence 35689999999999999999998 56643 221 111 22567777888777766
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=84.09 E-value=0.27 Score=49.26 Aligned_cols=51 Identities=25% Similarity=0.156 Sum_probs=35.5
Q ss_pred CCEEEEecCCccChHHHHhccccc-cccCchhhhhhhccccccchhhhHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGV-GISGVEGLQAACASDYSIGQFRFLLKL 645 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGi-gi~g~e~a~~a~~~~~~~~~f~~l~~l 645 (1045)
...++++||+.||..|.++|++++ ++............++..+++..|..+
T Consensus 162 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 162 ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 356999999999999999999977 443221111225567777777776554
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=83.90 E-value=0.8 Score=46.74 Aligned_cols=77 Identities=21% Similarity=0.213 Sum_probs=49.5
Q ss_pred CCcEEEEecCcccH--HHHHHHHHhcCC----CEEEEecCCc-cChHHHHhccccc-ccc-Cchhhhhhhccccccchhh
Q psy15803 570 CNAVICCRVSPLQK--AEVVELVTVNTN----SVTLAIGDGA-NDVAMIQKAHVGV-GIS-GVEGLQAACASDYSIGQFR 640 (1045)
Q Consensus 570 ~~~vv~~r~sP~qK--~~iV~~lq~~~g----~~v~~iGDG~-ND~~al~~AdVGi-gi~-g~e~a~~a~~~~~~~~~f~ 640 (1045)
...++.+...+..| ....+.+.+..| .-++||||+. ||+.|.+.|.++. ++. |..........++..+++.
T Consensus 145 f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~ 224 (238)
T 3ed5_A 145 FKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLE 224 (238)
T ss_dssp CSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGG
T ss_pred hheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHH
Confidence 34455554443333 445544443334 5699999998 9999999999854 442 3222223345688889999
Q ss_pred hHHHHH
Q psy15803 641 FLLKLL 646 (1045)
Q Consensus 641 ~l~~ll 646 (1045)
.|.++|
T Consensus 225 el~~~l 230 (238)
T 3ed5_A 225 ELYHIL 230 (238)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 998888
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=83.55 E-value=0.23 Score=51.96 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=33.7
Q ss_pred ccHHHHHHHHHhcCCCEEEEecC----CccChHHHHhcc-ccccccC
Q psy15803 581 LQKAEVVELVTVNTNSVTLAIGD----GANDVAMIQKAH-VGVGISG 622 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g~~v~~iGD----G~ND~~al~~Ad-VGigi~g 622 (1045)
-.|..-++.|.+ ...-|+++|| |.||.+||+.|. +|+|+..
T Consensus 186 v~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 186 WDKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp CSGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred CCHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 478888877777 4778999999 899999999885 7887754
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=81.61 E-value=0.49 Score=48.35 Aligned_cols=46 Identities=20% Similarity=0.189 Sum_probs=30.7
Q ss_pred CCEEEEecCCccChHHHHhccccc-cccCchhhhhhhccccccchhhhHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGV-GISGVEGLQAACASDYSIGQFRFLL 643 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGi-gi~g~e~a~~a~~~~~~~~~f~~l~ 643 (1045)
..-++||||+.||+.|.++|.+++ ++.+.+..+ .+++..+++..+.
T Consensus 163 ~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~---~ad~v~~s~~el~ 209 (233)
T 3nas_A 163 PADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML---GADLVVRQTSDLT 209 (233)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEECC----------CSEECSSGGGCC
T ss_pred HHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc---cCCEEeCChHhCC
Confidence 466999999999999999999988 444333322 4566666666654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=81.31 E-value=0.86 Score=47.84 Aligned_cols=51 Identities=16% Similarity=0.148 Sum_probs=37.3
Q ss_pred CEEEEecCCccChHHHHhccccc-ccc-Cc-----------------------hhhh--hhhccccccchhhhHHHHH
Q psy15803 596 SVTLAIGDGANDVAMIQKAHVGV-GIS-GV-----------------------EGLQ--AACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 596 ~~v~~iGDG~ND~~al~~AdVGi-gi~-g~-----------------------e~a~--~a~~~~~~~~~f~~l~~ll 646 (1045)
.-++||||+.||+.|.++|.+.. ++. |. .... .....++..+++..|..+|
T Consensus 187 ~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 264 (277)
T 3iru_A 187 NGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVI 264 (277)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHH
T ss_pred ccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHH
Confidence 56999999999999999999653 442 31 1111 2245788889999998887
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=81.22 E-value=1 Score=44.28 Aligned_cols=40 Identities=20% Similarity=0.075 Sum_probs=36.1
Q ss_pred cCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 990 LQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 990 lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+.++..++|+.|+++|+++.++||+....+..+++++|+-
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence 3456779999999999999999999999999999999974
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=80.98 E-value=0.45 Score=50.55 Aligned_cols=66 Identities=11% Similarity=0.020 Sum_probs=43.5
Q ss_pred ccHHHHHHHHHhcC---C-CEEEEecCCccChHHHHhccccc--cccCchhh---hhhhccccccchhhhHHHHH
Q psy15803 581 LQKAEVVELVTVNT---N-SVTLAIGDGANDVAMIQKAHVGV--GISGVEGL---QAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~---g-~~v~~iGDG~ND~~al~~AdVGi--gi~g~e~a---~~a~~~~~~~~~f~~l~~ll 646 (1045)
.-|...++.+.+.. . ..++||||+.||..|.++|.+|+ ++.+.+.. .....+++..+++..|..+|
T Consensus 204 Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l 278 (282)
T 3nuq_A 204 KPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVV 278 (282)
T ss_dssp TTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTS
T ss_pred CcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHh
Confidence 34555554443321 3 57999999999999999999976 44333211 12346678888888887765
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=80.84 E-value=1.3 Score=45.01 Aligned_cols=42 Identities=12% Similarity=0.261 Sum_probs=39.5
Q ss_pred CccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 988 DKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 988 d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
-++.|++.++++.|++.|+++.++|+.....+..+.+..|+-
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999999999999985
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=80.71 E-value=0.76 Score=46.81 Aligned_cols=51 Identities=18% Similarity=0.194 Sum_probs=35.2
Q ss_pred CEEEEecCCccChHHHHhcccc-cccc-Cc--hhhhhhhccccccchhhhHHHHH
Q psy15803 596 SVTLAIGDGANDVAMIQKAHVG-VGIS-GV--EGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 596 ~~v~~iGDG~ND~~al~~AdVG-igi~-g~--e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..++|+||+.||..|.++|+++ +++. |. .........++..+++..|.++|
T Consensus 171 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 171 SQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 225 (234)
T ss_dssp GGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred ccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHH
Confidence 5699999999999999999966 3442 21 11222233677777777777766
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=80.35 E-value=0.79 Score=47.16 Aligned_cols=52 Identities=12% Similarity=-0.032 Sum_probs=37.8
Q ss_pred CCEEEEecCCccChHHHHhccccc-ccc-Cchhhh--hhhccccccchhhhHHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGV-GIS-GVEGLQ--AACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGi-gi~-g~e~a~--~a~~~~~~~~~f~~l~~ll 646 (1045)
..-++||||+.||+.|.++|.++. ++. |..... ....+++..+++..|..+|
T Consensus 182 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 182 PNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp GGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred hhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 356999999999999999999764 553 322222 2246788888888888777
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=80.25 E-value=1.3 Score=44.93 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=36.0
Q ss_pred CCEEEEecCCc-cChHHHHhccccc-ccc-CchhhhhhhccccccchhhhHHHHH
Q psy15803 595 NSVTLAIGDGA-NDVAMIQKAHVGV-GIS-GVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 595 g~~v~~iGDG~-ND~~al~~AdVGi-gi~-g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..-++++||+. ||..|.++|++.. ++. |......-...++..+++..|..+|
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 172 GEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp GGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred chhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHH
Confidence 35699999997 9999999999544 332 2111111126777888888888877
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=80.23 E-value=1.6 Score=44.45 Aligned_cols=41 Identities=10% Similarity=-0.001 Sum_probs=38.9
Q ss_pred ccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 989 KLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 989 ~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
++++++.+.++.|++.|+++.++||.....+..+++.+|+-
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999983
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.10 E-value=0.49 Score=49.14 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=36.2
Q ss_pred CEEEEecCCccChHHHHhccccc-ccc-CchhhhhhhccccccchhhhHHHHH
Q psy15803 596 SVTLAIGDGANDVAMIQKAHVGV-GIS-GVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 596 ~~v~~iGDG~ND~~al~~AdVGi-gi~-g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.-++||||+.||+.|.++|.+.. ++. |.........+++..+++..|...+
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHH
Confidence 67899999999999999999554 332 2211123456677778888887666
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.06 E-value=1.3 Score=46.17 Aligned_cols=64 Identities=17% Similarity=0.196 Sum_probs=42.4
Q ss_pred HHHHHHHHHhcC---CCEEEEecCCc-cChHHHHhccccc-cc-cCch----hhhhhhccccccchhhhHHHHH
Q psy15803 583 KAEVVELVTVNT---NSVTLAIGDGA-NDVAMIQKAHVGV-GI-SGVE----GLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 583 K~~iV~~lq~~~---g~~v~~iGDG~-ND~~al~~AdVGi-gi-~g~e----~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
|...++.+.+.. ..-++|+||+. ||..|++.|.+++ ++ .|.. ..+.....++..+++..+.++|
T Consensus 192 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l 265 (271)
T 2x4d_A 192 SPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLL 265 (271)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHH
Confidence 455555444332 35699999998 9999999999987 44 2311 1111234677788888887766
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=80.01 E-value=0.63 Score=48.26 Aligned_cols=52 Identities=27% Similarity=0.422 Sum_probs=34.8
Q ss_pred CCEEEEecCCccChHHHHhccccc-ccc-Cch-h-hhhhhccccccchhhhHHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGV-GIS-GVE-G-LQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGi-gi~-g~e-~-a~~a~~~~~~~~~f~~l~~ll 646 (1045)
...++||||+.||+.|.++|++++ ++. |.. . .......++..+++..|.+++
T Consensus 187 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 187 PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred hhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence 456999999999999999999885 543 211 1 112344566667777665543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1045 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-21 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-16 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-08 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-04 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-06 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-04 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 93.0 bits (230), Expect = 1e-21
Identities = 34/208 (16%), Positives = 56/208 (26%), Gaps = 37/208 (17%)
Query: 797 NPSIEPVVREFLTMLAVCHTVIPEM-KDGVLQYHASSPDEKALILGAKAFGYVFTS---- 851
+ E T+ A+C+ + + + E AL + T
Sbjct: 43 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNL 102
Query: 852 KHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNE-----IKVFCKGADNMIL 906
+ Q LEF+ DRK MSV ++ K+F KGA ++
Sbjct: 103 SKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVI 162
Query: 907 SRLDSH---SKYVDETKTHLEQ---------FASSGYRTLCFGVAKIPEEKYKNWSALYK 954
R + + V T E+ R L P ++ +
Sbjct: 163 DRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSS 222
Query: 955 NAATSMTNREERIAEVCEMIETKLHLLG 982
ET L +G
Sbjct: 223 RF---------------MEYETDLTFVG 235
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 76.4 bits (187), Expect = 3e-16
Identities = 32/237 (13%), Positives = 61/237 (25%), Gaps = 51/237 (21%)
Query: 768 IWANGKDGGYLVLGNIVYTVTEQSRMIARNPSIEPVVREFLTMLAVCHTVIPEMKDGVLQ 827
+W + + I T + + A P + +C+ + + +
Sbjct: 7 MWFDNQ---------IHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENIS 57
Query: 828 YHAS----SPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRM 883
E AL+ + +++ R + + F S K
Sbjct: 58 VSKRDTAGDASESALLKCIELSCG-----SVRKMR-------DRNPKVAEISFNSTNKYQ 105
Query: 884 SVIVRTPQN--EIKVFCKGADNMILSRLD----------SHSKYVDETKTHLEQFASSGY 931
I N + KGA IL R + D + + G
Sbjct: 106 LSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGE 165
Query: 932 RTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVED 988
R L F +P K+ + + KL +G ++ D
Sbjct: 166 RVLGFCQLNLPSGKFPRG--------------FKFDTDELNFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 55.6 bits (133), Expect = 1e-08
Identities = 28/260 (10%), Positives = 60/260 (23%), Gaps = 40/260 (15%)
Query: 767 TIWANGKDGGYLVLGNIVY---TVTE-QSRMIARNPSIEPVVREFLTMLAVCHTVIPEMK 822
T++ D YL L + + + R + ++ + ++ + +M
Sbjct: 25 TVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNW---DML 81
Query: 823 DGVLQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKR 882
V H L E+++ + L +
Sbjct: 82 FIVFSIHLID---ILKKLSHDEIEAFMYQDEPVELKLQNIST--NLADCFNLNEQLPLQF 136
Query: 883 MSVIVRTPQNEIKVFCKGADNMILSRLDSHSKYVDETKTHLEQFASSGYRTLCFGVAKIP 942
+ + N + A + L + K L A Y+ G
Sbjct: 137 LDNVKVGKNNIYAALEEFAT----TELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192
Query: 943 EEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEYVPETIAALI 1002
+ + K +K + E V + L
Sbjct: 193 DVEKKIARTTFKTGYIYQEIILRPVDE------------------------VKVLLNDLK 228
Query: 1003 KAKISVWVLTGDKKETAINI 1022
A + + TG +
Sbjct: 229 GAGFELGIATGRPYTETVVP 248
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 42.9 bits (100), Expect = 2e-04
Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 8/82 (9%)
Query: 572 AVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAH---VGV--GISGVEGL 626
A+ + + VN + V +GD D+ QK +G G+ G +
Sbjct: 293 ALYGNNRDKYESYINKQDNIVNKDDV-FIVGDSLADLLSAQKIGATFIGTLTGLKGKDAA 351
Query: 627 Q--AACASDYSIGQFRFLLKLL 646
A +DY I L +L
Sbjct: 352 GELEAHHADYVINHLGELRGVL 373
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (114), Expect = 1e-06
Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Query: 548 GLALDYALKHELRKDFLELCLTCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGAND 607
+ + L+ F + S + + L + IGDGA D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 608 VAMIQKAHVGVGISGVEGL-QAACASDYSIGQFRFLL 643
+ A +G G Q + + I F LL
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 216
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 40.9 bits (95), Expect = 2e-04
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 988 DKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTPLLD 1037
D ++ V +I A I V ++TGD K TAI I + G++ + D
Sbjct: 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 68
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1045 | |||
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.92 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.88 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.84 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.84 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.72 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.69 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.13 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.09 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.94 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.81 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 97.72 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 97.33 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 97.14 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 96.99 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 96.92 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 96.9 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 96.83 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 96.33 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 96.2 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 96.1 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 95.73 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 95.37 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 95.22 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 94.84 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 94.49 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 94.33 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 94.28 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 90.84 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 90.27 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 90.26 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 87.19 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 84.02 |
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.92 E-value=3.9e-26 Score=236.21 Aligned_cols=167 Identities=17% Similarity=0.192 Sum_probs=123.4
Q ss_pred cchhhhhhhhhcccccccccccccc----ccccCCChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeecc
Q psy15803 801 EPVVREFLTMLAVCHTVIPEMKDGV----LQYHASSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEF 876 (1045)
Q Consensus 801 ~~~~~~~l~~~slc~~a~~~~~~~~----~~~~~g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F 876 (1045)
...++.++.+.++||.+.....+.. .....|||+|.||+.+|.+.|. +....+..|++++++||
T Consensus 31 ~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~------------~~~~~r~~~~~v~~~pF 98 (214)
T d1q3ia_ 31 SPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG------------SVRKMRDRNPKVAEISF 98 (214)
T ss_dssp SHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS------------CHHHHHHTSCEEEEEC-
T ss_pred CHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC------------CHHHHHhhCcEeeeEee
Confidence 3445567788899998876543322 1234589999999999998773 34455678899999999
Q ss_pred ccccceEEEEEEcC--CCcEEEEEeCCcHHHHHHhcc----------CchhHHHHHHHHHHHHHhcCeEEEEEEEecChh
Q psy15803 877 TSDRKRMSVIVRTP--QNEIKVFCKGADNMILSRLDS----------HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEE 944 (1045)
Q Consensus 877 ~s~~k~msvvv~~~--~~~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~ 944 (1045)
+|+||||+++++.+ ++.+++|+|||||+|+++|+. +++.++.+.+.+++|+++|+||||+|||.++.+
T Consensus 99 ~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~ 178 (214)
T d1q3ia_ 99 NSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSG 178 (214)
T ss_dssp -----CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTT
T ss_pred CCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCcc
Confidence 99999999999875 356899999999999999973 456678899999999999999999999999987
Q ss_pred HHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCccCcc
Q psy15803 945 KYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKLQEY 993 (1045)
Q Consensus 945 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~lr~~ 993 (1045)
++..+... +. ...+..|++|+|+|++|++||||++
T Consensus 179 ~~~~~~~~---------~~-----~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 179 KFPRGFKF---------DT-----DELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp TSCTTCCC---------CT-----TTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred cccccccc---------Ch-----hhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 65443210 00 0124568999999999999999985
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.88 E-value=1.8e-23 Score=205.47 Aligned_cols=138 Identities=24% Similarity=0.382 Sum_probs=117.4
Q ss_pred CchhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCCCc---eEEEechhhHHHhhHHHHHHHHHHhhcCCcE
Q psy15803 505 EPVVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNNNY---ALIIDGLALDYALKHELRKDFLELCLTCNAV 573 (1045)
Q Consensus 505 ~~~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~~~---~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~v 573 (1045)
||+|++.+.+|+.+++.|+++.|.| .+++.+|+...+. ...++|.++......+..+.+.+..
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------ 92 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRAC------ 92 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCC------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhh------
Confidence 3556677778888888888866655 5699999865443 3478999998888777777666644
Q ss_pred EEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHHHhhc
Q psy15803 574 ICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLLFVHG 650 (1045)
Q Consensus 574 v~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~lll~~G 650 (1045)
+|||++|+||..+|+.+|+. |++|+|+|||+||+|||++|||||++ +|++.+++++|++++.++|..+.++| .+|
T Consensus 93 v~ar~~p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I-~~G 168 (168)
T d1wpga2 93 CFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV-EEG 168 (168)
T ss_dssp EEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHH-HHH
T ss_pred hhhccchhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHH-HcC
Confidence 99999999999999999999 99999999999999999999999977 68899999999999999999999998 444
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=5.3e-22 Score=208.74 Aligned_cols=172 Identities=18% Similarity=0.189 Sum_probs=124.3
Q ss_pred Ccchhhhhhhhhccccccccccccc-cccccCCChhHHHHHHHHHHcCeEEeccccce----eeeecccccceeEEEEee
Q psy15803 800 IEPVVREFLTMLAVCHTVIPEMKDG-VLQYHASSPDEKALILGAKAFGYVFTSKHYKE----IEITALGETQRYVILNVL 874 (1045)
Q Consensus 800 ~~~~~~~~l~~~slc~~a~~~~~~~-~~~~~~g~p~e~all~~a~~~g~~~~~~~~~~----~~~~~~~~~~~~~il~~~ 874 (1045)
..+.++.++.+.++||++.....+. ......|||||.||+.+|.+.|+......... ........+..|++++++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 125 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL 125 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEe
Confidence 3445667788889999987654332 22345599999999999999986543321110 011122235789999999
Q ss_pred ccccccceEEEEEEcCCC-----cEEEEEeCCcHHHHHHhcc----------CchhHHHHHHHHHHH--HHhcCeEEEEE
Q psy15803 875 EFTSDRKRMSVIVRTPQN-----EIKVFCKGADNMILSRLDS----------HSKYVDETKTHLEQF--ASSGYRTLCFG 937 (1045)
Q Consensus 875 ~F~s~~k~msvvv~~~~~-----~~~~~~KGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~~~G~rvl~~a 937 (1045)
||||+||||||+++.+++ .+++|+|||||.|+++|+. +++.++.+.+.++.| |++|+||||+|
T Consensus 126 pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A 205 (239)
T d1wpga3 126 EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALA 205 (239)
T ss_dssp EEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEE
T ss_pred eecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEE
Confidence 999999999999998654 3689999999999999973 345566777777776 78999999999
Q ss_pred EEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEe
Q psy15803 938 VAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAV 986 (1045)
Q Consensus 938 ~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~ 986 (1045)
||.++.++...+.. +. ..++.+|+||+|+|++|+
T Consensus 206 ~k~~~~~~~~~~~~----------~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 206 TRDTPPKREEMVLD----------DS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EESSCCCGGGCCTT----------CG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEECCccccccccc----------ch-----hhHHHhcCCCEEEEEECC
Confidence 99998665332210 00 112567899999999996
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=1.9e-21 Score=176.28 Aligned_cols=110 Identities=23% Similarity=0.271 Sum_probs=87.6
Q ss_pred EEEEEECCeE--EEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecCCCCCCCCCCccc
Q psy15803 141 SVDVIRNGMI--YVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQAPNETSSLTDPSS 218 (1045)
Q Consensus 141 ~~~V~r~g~~--~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~~ 218 (1045)
.++|+|+|++ ++|+++||+|||||.|++||+|||||+||.+.. +.++||||+|||||.|+.|.+.+.....
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~~~----- 74 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPDPR----- 74 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCCTT-----
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeecccccccc-----
Confidence 5789999974 789999999999999999999999999998654 3489999999999999999875432110
Q ss_pred ccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhhcc
Q psy15803 219 LAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKNAT 288 (1045)
Q Consensus 219 ~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~~~ 288 (1045)
....+..|++|+||.+.++. ++++|++||.+|.+|++.+
T Consensus 75 ------------------------------~~~~~~~n~lf~GT~V~~G~-~~~~V~~tG~~T~~G~i~~ 113 (115)
T d1wpga1 75 ------------------------------AVNQDKKNMLFSGTNIAAGK-ALGIVATTGVSTEIGKIRD 113 (115)
T ss_dssp ------------------------------CCGGGCTTEECTTCEEEECE-EEEEEEECGGGSHHHHHHH
T ss_pred ------------------------------cccccccceEEeccEEEeee-EEEEEEEEccccHHHHHHH
Confidence 11223456677777666544 8999999999999998763
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.72 E-value=1.5e-18 Score=162.79 Aligned_cols=71 Identities=24% Similarity=0.361 Sum_probs=59.1
Q ss_pred EEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 574 ICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 574 v~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
++++++|++|..+|+.+|+ +++|+|+|||.||+|||++|||||++ ++++.+++++|++++.++|+.|.+++
T Consensus 63 v~~~~~p~~k~~~v~~~q~--~~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI 134 (135)
T d2b8ea1 63 VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134 (135)
T ss_dssp EECSCCHHHHHHHHHHHTT--TSCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHH
T ss_pred hccccchhHHHHHHHHHHc--CCEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHh
Confidence 9999999999999999987 46999999999999999999999977 67899999999999999999999876
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.69 E-value=1.7e-16 Score=183.37 Aligned_cols=207 Identities=13% Similarity=0.079 Sum_probs=142.3
Q ss_pred CCCCCCCceeccCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHhcccccccc-----CCcchhhhHHHHHHHHHHHHHHH
Q psy15803 52 QSCKFVGNKISTAKYSLVTFFPCFLFEQFRRYSNIFFLFIALLQQIPDVSPT-----GRYTTLIPLILIMVVSGIKEIIE 126 (1045)
Q Consensus 52 ~~~~~~~N~i~t~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~i~~~~~~-----~~~~~~~~l~~i~~i~~i~~~~~ 126 (1045)
+.++||.|+++..|-.. +++.+++||++++++.++++++++++...... ..|..++.+++++++++....+|
T Consensus 32 r~~~~G~N~l~~~~~~s---~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I~~vv~~n~~i~~~q 108 (472)
T d1wpga4 32 HLEKYGHNELPAEEGKS---LWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQ 108 (472)
T ss_dssp HHHHSCCSSCCCCCCCC---HHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCCCCCC---HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccchhHhHhhhhhheeeeeeeEEeEE
Confidence 35789999999877554 34677999999999999999999987543211 24667888889999999999999
Q ss_pred HHHHhhhhhhhcccEEEEEECCeEEEEeecccccCeEEEecCCCccceeEEEEeecCCCceEEEEeecCCcccccEeecC
Q psy15803 127 DIKRHLADGEINHRSVDVIRNGMIYVEQWKDLKVGDIVKVYNNSFFPGDLMVLSTSENEGMCYIETMNLDGETNLKVRQA 206 (1045)
Q Consensus 127 ~~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~vPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~ 206 (1045)
|+|..++.+.+++.... ...||++|+|.+|.
T Consensus 109 e~~a~~~~~~l~~~~~~----------------------~~~~~~~P~d~~l~--------------------------- 139 (472)
T d1wpga4 109 ERNAENAIEALKEYEPA----------------------ATEQDKTPLQQKLD--------------------------- 139 (472)
T ss_dssp HHSCCCHHHHHGGGSCC----------------------CCCCCCCHHHHHHH---------------------------
T ss_pred echHHHHHHHHhhhccc----------------------cccccCchHHHHHH---------------------------
Confidence 99998887666542100 02344444444332
Q ss_pred CCCCCCCCCcccccccceEEEecCCCCCCceeEEEEEecCCccccCCccceeeccceeecCcEEEEEEEEecCcchhhhh
Q psy15803 207 PNETSSLTDPSSLAQLKGQIECDHPNRFIYDFTGNFKERGRTAVPLGPERILLRGSMLRNTAWIIGIVVYTGPDSKLMKN 286 (1045)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~~l~~~n~l~~G~~l~nt~~~~~iV~~tG~~T~~~~~ 286 (1045)
T Consensus 140 -------------------------------------------------------------------------------- 139 (472)
T d1wpga4 140 -------------------------------------------------------------------------------- 139 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-cCCCCCCccccCCCchhhhHHHHHHHHhhccccchhhh
Q psy15803 287 ATSAPLKRSTVDKITNTQTIMLFVLLLALCFISAAASTIWT-LGRNAGDWYLLSRNPSFHSNLLTFIILYNNLIPISLQV 365 (1045)
Q Consensus 287 ~~~~~~k~s~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~L~v 365 (1045)
+....+.....+++...+....... .......| ...+...+..++++.+.++|++||+
T Consensus 140 ----------------~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ai~l~V~~iPEgLp~ 198 (472)
T d1wpga4 140 ----------------EFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW-----IRGAIYYFKIAVALAVAAIPEGLPA 198 (472)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHCCTTSSSCCSSSCS-----SSCGGGHHHHHHHHHHHHSCTTHHH
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHhChhhHHH
Confidence 2222222222222222222111110 00011122 2345667888999999999999999
Q ss_pred hHHHHHHHHHHHhhcccccccCCCCCCceecCCchhhhcccceEEeecCC--Cccccc
Q psy15803 366 TLEIVRFIQATFINNDMDMYYEPTDTPAAARTSNLNEELGMVKFVFSDKT--GTLTRN 421 (1045)
Q Consensus 366 ~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~r~~~~~e~Lg~v~~i~~DKT--GTLT~n 421 (1045)
+++++.++++.+| +++++++|+..++|++|+..++|+||| +|||.|
T Consensus 199 ~vti~La~~~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n 246 (472)
T d1wpga4 199 VITTCLALGTRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSN 246 (472)
T ss_dssp HHHHHHHHHHHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhh
Confidence 9999999999999 889999999999999999999999998 555544
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.13 E-value=1.7e-13 Score=153.42 Aligned_cols=133 Identities=20% Similarity=0.136 Sum_probs=99.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhhHH--------HHHHHcCCCCC-CceEEEechhhHHHhhHH---------HHHHHHHHhh
Q psy15803 507 VVREFLTMLAVCHTVYIELKHRT--------ALASLLGTTNN-NYALIIDGLALDYALKHE---------LRKDFLELCL 568 (1045)
Q Consensus 507 ~~~~~~~ti~~~~~~~~~~~~~~--------~~~~~lG~~~~-~~~~vi~G~~l~~~~~~~---------~~~~~~~~~~ 568 (1045)
++++..+++..|+++|+++.+.| .+++.+|+... ....+++|++........ ....+...+
T Consensus 216 p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~- 294 (380)
T d1qyia_ 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL- 294 (380)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH-
T ss_pred chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH-
Confidence 45677788888888888855443 55888887642 233466776654332210 012233322
Q ss_pred cCCcEEEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhcc---ccc--cccCchhhhh--hhccccccchhhh
Q psy15803 569 TCNAVICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAH---VGV--GISGVEGLQA--ACASDYSIGQFRF 641 (1045)
Q Consensus 569 ~~~~vv~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~Ad---VGi--gi~g~e~a~~--a~~~~~~~~~f~~ 641 (1045)
.++|++|.+|..+|+.++.. ++.|+|||||+||++|+++|+ ||| |+.|++++++ ...+|+..+++..
T Consensus 295 -----~~~~~~~~~k~~iv~~~~~~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~e 368 (380)
T d1qyia_ 295 -----YGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE 368 (380)
T ss_dssp -----HCCCGGGHHHHHHCCTTCSC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGG
T ss_pred -----HHcCCCHHHHHHHHHHhCCC-CCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHH
Confidence 78899999999999999998 899999999999999999999 899 7788888875 3468888899999
Q ss_pred HHHHH
Q psy15803 642 LLKLL 646 (1045)
Q Consensus 642 l~~ll 646 (1045)
|.++|
T Consensus 369 l~~il 373 (380)
T d1qyia_ 369 LRGVL 373 (380)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99887
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.09 E-value=2.3e-14 Score=160.48 Aligned_cols=159 Identities=13% Similarity=0.005 Sum_probs=119.5
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
++|++.+++...+..+ ......++.|.....+||++.+|+|+++....++.+.++.||+++.+.
T Consensus 97 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~---- 160 (380)
T d1qyia_ 97 SHDEIEAFMYQDEPVE------------LKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH---- 160 (380)
T ss_dssp CHHHHHHHHHCSSCHH------------HHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----
T ss_pred CCCcHHHHHHHHhhcc------------chHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----
Confidence 5788888887655443 223334456666789999999999998876555555566677776652
Q ss_pred cCchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCcc
Q psy15803 911 SHSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDKL 990 (1045)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l 990 (1045)
.......++.+.+..++.+|+|++++|++..+..+ .....+....|+++.++++
T Consensus 161 ~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~--------------------------~~~~~~~~~~g~i~~~~~i 214 (380)
T d1qyia_ 161 VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE--------------------------KKIARTTFKTGYIYQEIIL 214 (380)
T ss_dssp CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH--------------------------CSCCSCSSCCCTTTTCCBS
T ss_pred CcHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc--------------------------cccchhhHhcccccccccc
Confidence 22334556677788999999999999876553322 2233455667899999995
Q ss_pred C--ccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCC
Q psy15803 991 Q--EYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQ 1031 (1045)
Q Consensus 991 r--~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~ 1031 (1045)
| ++++++|+.||++||+++|+|||+..+|.++++++||.+.
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~ 257 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY 257 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCccc
Confidence 5 5999999999999999999999999999999999999753
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.94 E-value=3.9e-10 Score=109.31 Aligned_cols=47 Identities=32% Similarity=0.352 Sum_probs=45.3
Q ss_pred CccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCccCCCCC
Q psy15803 988 DKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLVGQDTP 1034 (1045)
Q Consensus 988 d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~~~~~~ 1034 (1045)
||||++++++|+.||++||+|||+|||++.||++||+++||+.++.+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~ 65 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE 65 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccc
Confidence 99999999999999999999999999999999999999999988764
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.81 E-value=7.7e-10 Score=102.75 Aligned_cols=50 Identities=24% Similarity=0.210 Sum_probs=46.9
Q ss_pred EEEEEEEecCccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc
Q psy15803 979 HLLGASAVEDKLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRL 1028 (1045)
Q Consensus 979 ~~lG~~~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi 1028 (1045)
+..+.++++|++|++++++|+.||++||++||+|||+..||.++|+++||
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhh
Confidence 33456899999999999999999999999999999999999999999998
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.72 E-value=2.3e-05 Score=77.70 Aligned_cols=75 Identities=17% Similarity=0.112 Sum_probs=54.6
Q ss_pred EEEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHHHhh
Q psy15803 574 ICCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLLFVH 649 (1045)
Q Consensus 574 v~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~lll~~ 649 (1045)
......+.-+...++.++-. ..-|+|+|||.||.+|++.|++||++...|..++.++-.....++..|.+.|+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~i~-~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 125 GYQLRQKDPKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKA 199 (206)
T ss_dssp EEECCSSSHHHHHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEECSHHHHHHHHHHH
T ss_pred cccccchhhHHHHHHHhccc-ccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceeecCHHHHHHHHHHH
Confidence 34445566666777777766 7889999999999999999999999965544444333333467788888877543
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=5.7e-05 Score=75.96 Aligned_cols=118 Identities=18% Similarity=0.194 Sum_probs=75.1
Q ss_pred hhHHHHHHHHHHHHHhhhh--------hhHHHHHHHcCCCCCCc-----eEEEechhhHHHhhHHHHHHHHHHhhcCCcE
Q psy15803 507 VVREFLTMLAVCHTVYIEL--------KHRTALASLLGTTNNNY-----ALIIDGLALDYALKHELRKDFLELCLTCNAV 573 (1045)
Q Consensus 507 ~~~~~~~ti~~~~~~~~~~--------~~~~~~~~~lG~~~~~~-----~~vi~G~~l~~~~~~~~~~~~~~~~~~~~~v 573 (1045)
+.+++.+.+..+++.|.++ ...+.+++.+|++..+. ....+|.-.....
T Consensus 83 l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~------------------ 144 (217)
T d1nnla_ 83 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE------------------ 144 (217)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT------------------
T ss_pred cCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccccee------------------
Confidence 4467778899999988873 23446688888764210 0111122100000
Q ss_pred EEEecCcccHHHHHHHHHhcCC-CEEEEecCCccChHHHHhccccccccCchhh-hhhhccccccchhhhH
Q psy15803 574 ICCRVSPLQKAEVVELVTVNTN-SVTLAIGDGANDVAMIQKAHVGVGISGVEGL-QAACASDYSIGQFRFL 642 (1045)
Q Consensus 574 v~~r~sP~qK~~iV~~lq~~~g-~~v~~iGDG~ND~~al~~AdVGigi~g~e~a-~~a~~~~~~~~~f~~l 642 (1045)
...-..+..|+++++.++++.+ ..+.|+|||.||.+|++.|+++|++.+.... +.+..+++.+.+|..|
T Consensus 145 ~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 145 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred eeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 0011345779999999986533 4699999999999999999999988765333 3334566777777765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=97.14 E-value=0.00023 Score=68.39 Aligned_cols=77 Identities=16% Similarity=0.158 Sum_probs=58.6
Q ss_pred cCcccHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch----hhhHHHHHHhh
Q psy15803 578 VSPLQKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ----FRFLLKLLFVH 649 (1045)
Q Consensus 578 ~sP~qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~----f~~l~~lll~~ 649 (1045)
....+|...++.+.++. ...|+++|||.||.+||+.|++|++. .+.+..+++++.+..... ++.+...||.+
T Consensus 76 ~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~ 155 (177)
T d1k1ea_ 76 LGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQA 155 (177)
T ss_dssp ESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHHHH
Confidence 34556766666554432 36799999999999999999999987 567889999988886655 78888877644
Q ss_pred -cchhh
Q psy15803 650 -GSWNY 654 (1045)
Q Consensus 650 -Gr~~~ 654 (1045)
|+|.+
T Consensus 156 ~~~~~~ 161 (177)
T d1k1ea_ 156 QGKSSV 161 (177)
T ss_dssp TTCTHH
T ss_pred CCChHH
Confidence 77654
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.99 E-value=0.00026 Score=71.05 Aligned_cols=69 Identities=13% Similarity=0.025 Sum_probs=54.4
Q ss_pred cCcccHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 578 VSPLQKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 578 ~sP~qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.....|...++.+.+.. ...|+++|||.||.+|++.|++||++ ++.+..+++++.+.-.++...+.++|
T Consensus 148 ~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i 220 (230)
T d1wr8a_ 148 KPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAI 220 (230)
T ss_dssp CTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHH
T ss_pred eCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHH
Confidence 34567888887776543 35699999999999999999999987 67788899988887777766555554
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.92 E-value=0.00031 Score=70.69 Aligned_cols=66 Identities=18% Similarity=0.110 Sum_probs=54.9
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..|...++.+.+..| .-|+++|||.||.+|++.|++||++ ++.+..+++++.+...++...+.+++
T Consensus 150 ~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l 219 (225)
T d1l6ra_ 150 EDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219 (225)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHH
T ss_pred cchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHH
Confidence 479888887765433 4599999999999999999999998 57888999999888888877777776
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.90 E-value=0.00016 Score=71.49 Aligned_cols=52 Identities=29% Similarity=0.389 Sum_probs=43.2
Q ss_pred CCEEEEecCCccChHHHHhccccccccCchhhhhhhccccccchhhhHHHHH
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGVGISGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGigi~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..-+.|+|||.||.+|++.|++||++.+.+..++.++.+.-.+++..|.+.|
T Consensus 158 ~~~~i~iGDs~nDi~m~~~ag~~va~na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 158 LEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp GGGEEEEESSGGGHHHHHHCSEEEEESCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccceEEecCCcChHHHHHHCCCCEEECCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 3568999999999999999999999988888888888777666777665543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=96.83 E-value=0.00031 Score=70.57 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=56.4
Q ss_pred EEecCcccHHHHHHHHHhcCCCEEEEecCCccChHHHHhcccccccc-CchhhhhhhccccccchhhhHHHHH
Q psy15803 575 CCRVSPLQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGIS-GVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 575 ~~r~sP~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~-g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
++...|..|..+++.++.. +..|+||||+.||.+|+++||++++.. ..+..++........++|+.|...|
T Consensus 142 ~~~~k~~~~~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l 213 (226)
T d2feaa1 142 CSNQCGCCKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEI 213 (226)
T ss_dssp CCSCCSSCHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred cccCCHHHHHHHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHH
Confidence 3567899999999999877 789999999999999999999998653 3344555544455678888887777
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=96.33 E-value=0.0014 Score=68.10 Aligned_cols=70 Identities=20% Similarity=0.279 Sum_probs=53.3
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 577 RVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.++|. .|..-++.+.+..| ..|+++|||.||.+||+.|+.||++ ++.+..++.++.+.-..+=..+.+.|
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l 281 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMM 281 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHH
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHH
Confidence 45564 79999988887644 4699999999999999999999988 57788888887666544433344433
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=96.20 E-value=0.0011 Score=68.42 Aligned_cols=70 Identities=19% Similarity=0.267 Sum_probs=53.4
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 577 RVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
.++|. .|..-|+.+.+..| .-|+++|||.||.+||+.|++||++ ++.+..+++++.+.-..+-..+..+|
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i 258 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVL 258 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHH
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHH
Confidence 45664 69999988876533 4589999999999999999999988 57788888888776555544444443
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=96.10 E-value=0.002 Score=66.25 Aligned_cols=63 Identities=17% Similarity=0.208 Sum_probs=50.4
Q ss_pred EecCcc--cHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccch
Q psy15803 576 CRVSPL--QKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQ 638 (1045)
Q Consensus 576 ~r~sP~--qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~ 638 (1045)
-.++|. .|..-++.+.+..| .-|+++|||.||.+|++.|+.|+++ .+.+-.++.++.+....+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNN 250 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGG
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCC
Confidence 355664 59999988876544 4599999999999999999999988 577888888877665544
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=95.73 E-value=0.0035 Score=64.06 Aligned_cols=71 Identities=23% Similarity=0.296 Sum_probs=51.3
Q ss_pred EecCcc--cHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccccchhhhHHHHH
Q psy15803 576 CRVSPL--QKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSIGQFRFLLKLL 646 (1045)
Q Consensus 576 ~r~sP~--qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~~~f~~l~~ll 646 (1045)
..+.|. .|..-++.+.++. ...++++|||.||.+||+.|+.||++ ++.+..++.++.+--.++=..+..+|
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l 254 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAM 254 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHH
Confidence 344553 6999888887643 35689999999999999999999988 46777887777554444433444444
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=95.37 E-value=0.0051 Score=63.10 Aligned_cols=59 Identities=25% Similarity=0.311 Sum_probs=46.6
Q ss_pred ecCcc--cHHHHHHHHHhcC---CCEEEEecCCccChHHHHhccccccc-cCchhhhhhhccccc
Q psy15803 577 RVSPL--QKAEVVELVTVNT---NSVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYS 635 (1045)
Q Consensus 577 r~sP~--qK~~iV~~lq~~~---g~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~ 635 (1045)
..+|. .|...|+.+.+.. ..-++++|||.||.+|++.|+.|+++ .+.+..++.++.+..
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~ 254 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTK 254 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECC
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcC
Confidence 34554 6999998887653 24589999999999999999999988 567777877776544
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=95.22 E-value=0.0064 Score=62.55 Aligned_cols=56 Identities=16% Similarity=0.298 Sum_probs=45.4
Q ss_pred ccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhcccccc
Q psy15803 581 LQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACASDYSI 636 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~~~~~~ 636 (1045)
..|..-++.+.+..+ ..|+++|||.||.+|++.|+.|+++ ++.+..++.++.+...
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~ 265 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPV 265 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSS
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECC
Confidence 468887777766533 5799999999999999999999988 5778888888877643
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=94.84 E-value=0.038 Score=49.89 Aligned_cols=105 Identities=16% Similarity=0.290 Sum_probs=73.5
Q ss_pred CChhHHHHHHHHHHcCeEEeccccceeeeecccccceeEEEEeeccccccceEEEEEEcCCCcEEEEEeCCcHHHHHHhc
Q psy15803 831 SSPDEKALILGAKAFGYVFTSKHYKEIEITALGETQRYVILNVLEFTSDRKRMSVIVRTPQNEIKVFCKGADNMILSRLD 910 (1045)
Q Consensus 831 g~p~e~all~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~~k~msvvv~~~~~~~~~~~KGa~e~i~~~~~ 910 (1045)
..|.-.|++++|++.+..... ...+.-....||+...+...+.+. + ..+..|++..+..++.
T Consensus 30 eHPlakAIv~~Ak~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~g~~~~---g--~~v~~G~~~~~~~~~~ 91 (136)
T d2a29a1 30 ETPEGRSIVILAKQRFNLRER-------------DVQSLHATFVPFTAQSRMSGINID---N--RMIRKGSVDAIRRHVE 91 (136)
T ss_dssp CSHHHHHHHHHHHHHHCCCCC-------------CTTTTTCEEEEEETTTTEEEEEET---T--EEEEEECHHHHHHHHH
T ss_pred CchHHHHHHHHHHHhcCCCcc-------------ccccccccccccccccceEEEEEC---C--EEEEecHHHHHHHHHH
Confidence 479999999999875421110 011112235677777665555442 3 3677899988877653
Q ss_pred c-CchhHHHHHHHHHHHHHhcCeEEEEEEEecChhHHHhHHHHHHHHhhcccchHHHHHHHHHhhccCeEEEEEEEecCc
Q psy15803 911 S-HSKYVDETKTHLEQFASSGYRTLCFGVAKIPEEKYKNWSALYKNAATSMTNREERIAEVCEMIETKLHLLGASAVEDK 989 (1045)
Q Consensus 911 ~-~~~~~~~~~~~~~~~~~~G~rvl~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 989 (1045)
. ......++.+.+++++.+|..++.+| .|-+++|++++.|+
T Consensus 92 ~~g~~~~~~~~~~~~~~~~~G~Tvv~Va--------------------------------------~d~~~~G~i~l~D~ 133 (136)
T d2a29a1 92 ANGGHFPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALKDI 133 (136)
T ss_dssp HHTCCCCHHHHHHHHHHHHTTSEEEEEE--------------------------------------ETTEEEEEEEEEES
T ss_pred HcCCCCcHHHHHHHHHHHHCCCeEEEEE--------------------------------------ECCEEEEEEEEEee
Confidence 2 22446788888999999999999999 45689999999999
Q ss_pred cC
Q psy15803 990 LQ 991 (1045)
Q Consensus 990 lr 991 (1045)
+|
T Consensus 134 iK 135 (136)
T d2a29a1 134 VK 135 (136)
T ss_dssp SC
T ss_pred cC
Confidence 87
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=94.49 E-value=0.011 Score=58.65 Aligned_cols=42 Identities=24% Similarity=0.476 Sum_probs=31.2
Q ss_pred cHHHHHHHHHh------cCCCEEEEecCCccChHHHHhccccccccCc
Q psy15803 582 QKAEVVELVTV------NTNSVTLAIGDGANDVAMIQKAHVGVGISGV 623 (1045)
Q Consensus 582 qK~~iV~~lq~------~~g~~v~~iGDG~ND~~al~~AdVGigi~g~ 623 (1045)
.|..-++.+.+ -....|+++|||.||.+||+.|++||++.+.
T Consensus 184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~n~ 231 (232)
T d1xvia_ 184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGL 231 (232)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCC
T ss_pred hHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEEEeCC
Confidence 45555544443 2245689999999999999999999988653
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=94.33 E-value=0.011 Score=59.54 Aligned_cols=53 Identities=21% Similarity=0.272 Sum_probs=41.6
Q ss_pred CcccHHHHHHHHHhcCC---CEEEEecCCccChHHHHhccccccc-cCchhhhhhhc
Q psy15803 579 SPLQKAEVVELVTVNTN---SVTLAIGDGANDVAMIQKAHVGVGI-SGVEGLQAACA 631 (1045)
Q Consensus 579 sP~qK~~iV~~lq~~~g---~~v~~iGDG~ND~~al~~AdVGigi-~g~e~a~~a~~ 631 (1045)
....|...++.+.+..| .-|+++|||.||.+|++.|+.|+.+ ++.+..++.++
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~ 215 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYD 215 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHH
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhh
Confidence 45679999988887754 4589999999999999999999988 45555555443
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.28 E-value=0.0078 Score=60.29 Aligned_cols=30 Identities=23% Similarity=0.206 Sum_probs=25.5
Q ss_pred CCEEEEecCCccChHHHHhccccccc-cCch
Q psy15803 595 NSVTLAIGDGANDVAMIQKAHVGVGI-SGVE 624 (1045)
Q Consensus 595 g~~v~~iGDG~ND~~al~~AdVGigi-~g~e 624 (1045)
..-|+++|||.||.+|++.|+.||++ ++.+
T Consensus 196 ~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~ 226 (243)
T d1wzca1 196 QIESYAVGDSYNDFPMFEVVDKVFIVGSLKH 226 (243)
T ss_dssp CEEEEEEECSGGGHHHHTTSSEEEEESSCCC
T ss_pred cccEEEEcCCHhHHHHHHcCCcEEEeCCCCh
Confidence 35789999999999999999999987 3443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.84 E-value=0.048 Score=53.80 Aligned_cols=53 Identities=15% Similarity=0.217 Sum_probs=41.0
Q ss_pred ccHHHHHHHHHhcCCCEEEEecC----CccChHHHHhcc-cccccc-Cchhhhhhhccc
Q psy15803 581 LQKAEVVELVTVNTNSVTLAIGD----GANDVAMIQKAH-VGVGIS-GVEGLQAACASD 633 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g~~v~~iGD----G~ND~~al~~Ad-VGigi~-g~e~a~~a~~~~ 633 (1045)
-.|..-++.|.+....-|.++|| |.||.+|++.|. .|+++. ..|..+..+++.
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~ 242 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIF 242 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhc
Confidence 35777777777665678999999 679999999997 699884 557777666554
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.27 E-value=0.69 Score=44.68 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=40.7
Q ss_pred eEEEEEEEEcCccccCCCCCchhHhhhhhhcCCCCchHHHHHHHHHHhhceeeeecCCc---------e-----------
Q psy15803 422 VMEFKICSVAGNILVPNFNSNNVQEQSRMIARNPSIEPVVREFLTMLAVCHTVCSVAGN---------I----------- 481 (1045)
Q Consensus 422 ~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~v~~~~~~---------~----------- 481 (1045)
.|+|+++|+++..+..+...... . .......+....++.+.++|+......++ +
T Consensus 1 ~MTV~~~w~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~ 74 (214)
T d1q3ia_ 1 MMTVAHMWFDNQIHEADTTEDQS--G----ATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLK 74 (214)
T ss_dssp CCEEEEEEETTEEEECCCC------------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHH
T ss_pred CeEEEEEEECCEEEEcCCCCcCC--C----cccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHH
Confidence 38999999998877543221110 0 00111246677788889999876543210 0
Q ss_pred -------------------eecccCCCCcccceEEEEecCC
Q psy15803 482 -------------------LVPNFNSNNVKEQSRMIARNPS 503 (1045)
Q Consensus 482 -------------------l~~~f~~~~~~~~~svi~~~~~ 503 (1045)
-.+||+|++ |+|+++++.+.
T Consensus 75 ~a~~~~~~~~~~r~~~~~v~~~pF~S~r--K~ms~v~~~~~ 113 (214)
T d1q3ia_ 75 CIELSCGSVRKMRDRNPKVAEISFNSTN--KYQLSIHERED 113 (214)
T ss_dssp HHHHHHSCHHHHHHTSCEEEEEC--------CEEEEEECSS
T ss_pred HHHHhCCCHHHHHhhCcEeeeEeeCCCC--CEEEEEEEccC
Confidence 178999999 99999998754
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.26 E-value=0.1 Score=51.04 Aligned_cols=41 Identities=12% Similarity=0.273 Sum_probs=39.0
Q ss_pred ccCccHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCcc
Q psy15803 989 KLQEYVPETIAALIKAKISVWVLTGDKKETAINIGYSSRLV 1029 (1045)
Q Consensus 989 ~lr~~~~~~I~~l~~agi~v~miTGD~~~tA~~ia~~~gi~ 1029 (1045)
+++|++.++|+.||+.|++++++||.....+..+++.+|+-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~ 122 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 122 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCc
Confidence 47899999999999999999999999999999999999984
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=87.19 E-value=0.11 Score=50.54 Aligned_cols=39 Identities=21% Similarity=0.276 Sum_probs=32.9
Q ss_pred ccHHHHHHHHHhcCCCEEEEecCCccChHHHHhcccccccc
Q psy15803 581 LQKAEVVELVTVNTNSVTLAIGDGANDVAMIQKAHVGVGIS 621 (1045)
Q Consensus 581 ~qK~~iV~~lq~~~g~~v~~iGDG~ND~~al~~AdVGigi~ 621 (1045)
..|..-++.+.+. .-++++||+.||.+|++.|+-|+++.
T Consensus 158 ~~Kg~al~~l~~~--~~~i~~GDs~ND~~Mf~~~~~~~av~ 196 (229)
T d1u02a_ 158 VNKGSAIRSVRGE--RPAIIAGDDATDEAAFEANDDALTIK 196 (229)
T ss_dssp CCHHHHHHHHHTT--SCEEEEESSHHHHHHHHTTTTSEEEE
T ss_pred CCHHHHHHHHhcc--ccceeecCCCChHHHHhccCCeEEEE
Confidence 4699999999875 45778999999999999998887663
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.02 E-value=0.12 Score=50.66 Aligned_cols=43 Identities=21% Similarity=0.345 Sum_probs=30.6
Q ss_pred cHHHHHHHHHhcCCCEEEEecC----CccChHHHHhcc-ccccccCch
Q psy15803 582 QKAEVVELVTVNTNSVTLAIGD----GANDVAMIQKAH-VGVGISGVE 624 (1045)
Q Consensus 582 qK~~iV~~lq~~~g~~v~~iGD----G~ND~~al~~Ad-VGigi~g~e 624 (1045)
.|..-++.|.+....-|+++|| |.||.+||+.|. .|++++..|
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~ 232 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPE 232 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHH
Confidence 4665566665554678999999 889999999996 677775543
|