Psyllid ID: psy15850

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
Protein Sequence
MISPIQTTDNRPNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTYRI
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccccccccccccccccccEEEEEEEccccccEEEEccEEcEEccccEEEccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccEEEEccccccccccccccHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHcccccEEccEccccEEEEEEcccccEEEEEEccEEEEEEHHHEEEcccccccccccccccccEEEEEEEcccccEEEEEcccccccccccccEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEc
Coil and Loop (DISEMBL)
mispiqttdnrpnsivdsevtlqYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDissrrhtdnftelsfkkgdIIFVRRQVdknwyegehnamiglfpfnyveiipydkirtapkklsegQARAKFNFVAQTHLELSlvkesphkyvdsevtlqyRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDissrrhtdnftyri
Flexible Loop (DISEMBL)
mispiqttdnrpnsivdsevtlqyrrpvrneikeliseeelARRQAEAMRRIYQEERRRKYLQelhdissrrhtdnftelsfkkgdiifVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELslvkesphkyvdsevtlqyrrpvrneikeliseeelARRQAEAMRRIYQEERRRKYLqelhdissrrhtdnftyri
Low Complexity Region (SEG)
MISPIQTTDNRPNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTYRI
Disordered region (IsUnstruct)
*************************************************************************TDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLS*GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV*****************************************************
Disordered Region (DISOPRED)
*****************************************************************HDISSRRHT****ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI**********************NFVAQTHLELSLVKESPHKYVDSEVT************************************************************
Disordered Region (DISEMBL)
**********RPNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTYRI
Disordered Region (DISPRO)
*****************SEVTLQ************ISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTYRI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MISPIQTTDNRPNSIVDSEVTLQYRRPVxxxxxxxxxxxxxxxxxxxxxxxxxxxxRRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVxxxxxxxxxxxxxxxxxxxxxxxxxxxxRRRKYLQELHDISSRRHTDNFTYRI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	225	2.2.26 [Sep-21-2011]
Q9BX66	1292	Sorbin and SH3 domain-con	no	N/A	0.524	0.091	0.313	9e-17
Q62417	1290	Sorbin and SH3 domain-con	no	N/A	0.524	0.091	0.307	2e-16
O94875	1100	Sorbin and SH3 domain-con	no	N/A	0.333	0.068	0.481	1e-14
Q3UTJ2	1180	Sorbin and SH3 domain-con	no	N/A	0.333	0.063	0.481	1e-14
O35413	1196	Sorbin and SH3 domain-con	no	N/A	0.333	0.062	0.481	1e-14
Q9R1Z8	733	Vinexin OS=Mus musculus G	no	N/A	0.426	0.130	0.390	3e-14
O60504	671	Vinexin OS=Homo sapiens G	no	N/A	0.422	0.141	0.384	6e-14
Q8AXV0	367	Endophilin-A2 OS=Gallus g	no	N/A	0.195	0.119	0.545	4e-09
Q5RBR0	888	E3 ubiquitin-protein liga	no	N/A	0.151	0.038	0.625	5e-09
Q7Z6J0	888	E3 ubiquitin-protein liga	no	N/A	0.151	0.038	0.625	5e-09

>sp|Q9BX66|SRBS1_HUMAN Sorbin and SH3 domain-containing protein 1 OS=Homo sapiens GN=SORBS1 PE=1 SV=3

 Score = 87.0 bits (214), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 51/169 (30%)

Query: 35  LISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTD------------------- 75
           L S EE  RR+ +   ++  ++RR K  QE  DI++RRHT                    
Sbjct: 723 LESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLN 782

Query: 76  -------------------------NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLF 110
                                       EL  +KGDI+++ +Q+D+NWYEGEH+  +G+F
Sbjct: 783 IDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIF 842

Query: 111 PFNYVEIIPYDKIRTAPKKLSE------GQARAKFNFVAQTHLELSLVK 153
           P  Y+E++P  + +  PKKL+       G+A AKFNF   T +E+S  K
Sbjct: 843 PRTYIELLPPAE-KAQPKKLTPVQVLEYGEAIAKFNFNGDTQVEMSFRK 890

Plays a role in tyrosine phosphorylation of CBL by linking CBL to the insulin receptor. Required for insulin-stimulated glucose transport. Involved in formation of actin stress fibers and focal adhesions.
Homo sapiens (taxid: 9606)

>sp|Q62417|SRBS1_MOUSE Sorbin and SH3 domain-containing protein 1 OS=Mus musculus GN=Sorbs1 PE=1 SV=2

 Score = 85.9 bits (211), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 51/169 (30%)

Query: 35   LISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTD------------------- 75
            L S EE  RR+ +   ++  ++RR K  QE  DI++RRHT                    
Sbjct: 979  LESTEEFIRRRHDDKEKLLADQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLN 1038

Query: 76   -------------------------NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLF 110
                                        EL  +KGD++++ RQ+D+NWYEGEH+  +G+F
Sbjct: 1039 IDDTAKRKSGLEMRPARAKFDFKAQTLKELPLQKGDVVYIYRQIDQNWYEGEHHGRVGIF 1098

Query: 111  PFNYVEIIPYDKIRTAPKKLSE------GQARAKFNFVAQTHLELSLVK 153
            P  Y+E++P  + +  P+KL+       G+A AKFNF   T +E+S  K
Sbjct: 1099 PRTYIELLPPAE-KAQPRKLAPVQVLEYGEAIAKFNFNGDTQVEMSFRK 1146

Plays a role in tyrosine phosphorylation of CBL by linking CBL to the insulin receptor. Required for insulin-stimulated glucose transport. Involved in formation of actin stress fibers and focal adhesions.

Mus musculus (taxid: 10090)

>sp|O94875|SRBS2_HUMAN Sorbin and SH3 domain-containing protein 2 OS=Homo sapiens GN=SORBS2 PE=1 SV=3

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 6/81 (7%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE-IIPYDKIRTAPKKLSE----- 132
           ELSFKKGD +++ R++D+NWYEGEH+  +G+FP +YVE + P +K + A           
Sbjct: 881 ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPAQPGEI 940

Query: 133 GQARAKFNFVAQTHLELSLVK 153
           G+A AK+NF A T++ELSL K
Sbjct: 941 GEAIAKYNFNADTNVELSLRK 961

Adapter protein that plays a role in the assembling of signaling complexes, being a link between ABL kinases and actin cytoskeleton. Can form complex with ABL1 and CBL, thus promoting ubiquitination and degradation of ABL1 or with AKT1 and PAK1, thus mediating AKT1-mediated activation of PAK1. Isoform 6 increases water and sodium absorption in the intestine and gall-bladder.

Homo sapiens (taxid: 9606)

>sp|Q3UTJ2|SRBS2_MOUSE Sorbin and SH3 domain-containing protein 2 OS=Mus musculus GN=Sorbs2 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 6/81 (7%)

Query: 79   ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE-IIPYDKIRTAPKKLSE----- 132
            ELSFKKGD +++ R++D+NWYEGEH+  +G+FP +YVE + P +K + A           
Sbjct: 961  ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPVQPGEI 1020

Query: 133  GQARAKFNFVAQTHLELSLVK 153
            G+A AK+NF A T++ELSL K
Sbjct: 1021 GEAIAKYNFNADTNVELSLRK 1041

Adapter protein that plays a role in the assembling of signaling complexes, being a link between ABL kinases and actin cytoskeleton. Can form complex with ABL1 and CBL, thus promoting ubiquitination and degradation of ABL1 or with AKT1 and PAK1, thus mediating AKT1-mediated activation of PAK1.

Mus musculus (taxid: 10090)

>sp|O35413|SRBS2_RAT Sorbin and SH3 domain-containing protein 2 OS=Rattus norvegicus GN=Sorbs2 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 6/81 (7%)

Query: 79   ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE-IIPYDKIRTAPKKLSE----- 132
            ELSFKKGD +++ R++D+NWYEGEH+  +G+FP +YVE + P +K + A           
Sbjct: 977  ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPVQPGEI 1036

Query: 133  GQARAKFNFVAQTHLELSLVK 153
            G+A AK+NF A T++ELSL K
Sbjct: 1037 GEAIAKYNFNADTNVELSLRK 1057

Adapter protein that plays a role in the assembling of signaling complexes, being a link between ABL kinases and actin cytoskeleton. Can form complex with ABL1 and CBL, thus promoting ubiquitination and degradation of ABL1 or with AKT1 and PAK1, thus mediating AKT1-mediated activation of PAK1 (By similarity). Isoform 2 increases water and sodium absorption in the intestine and gall-bladder.

Rattus norvegicus (taxid: 10116)

>sp|Q9R1Z8|VINEX_MOUSE Vinexin OS=Mus musculus GN=Sorbs3 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 9/105 (8%)

Query: 54  QEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFN 113
           +EE++RK  +   D  ++    +  ELS +KGDI+++ ++VDKNW EGEH+  +G+FP N
Sbjct: 441 KEEKKRKAARLKFDFQAQ----SPKELSLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPAN 496

Query: 114 YVEIIPYDKIRTAPKK-----LSEGQARAKFNFVAQTHLELSLVK 153
           YVE++P D+I    K      L  G A A++ F     +ELS  K
Sbjct: 497 YVEVLPADEIPKPIKPPTYQVLEYGDAVAQYTFKGDLEVELSFRK 541

Promotes up-regulation of actin stress fiber formation.

Mus musculus (taxid: 10090)

>sp|O60504|VINEX_HUMAN Vinexin OS=Homo sapiens GN=SORBS3 PE=1 SV=2

 Score = 77.8 bits (190), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 9/104 (8%)

Query: 55  EERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNY 114
           EE++RK  +   D  ++    +  EL+ +KGDI+++ ++VDKNW EGEH+  +G+FP NY
Sbjct: 378 EEKKRKAARLKFDFQAQ----SPKELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANY 433

Query: 115 VEIIPYDKIRTAPKK-----LSEGQARAKFNFVAQTHLELSLVK 153
           VE++P D+I    K      L  G+A A++ F     +ELS  K
Sbjct: 434 VEVLPADEIPKPIKPPTYQVLEYGEAVAQYTFKGDLEVELSFRK 477

Vinexin alpha isoform promotes up-regulation of actin stress fiber formation. Vinexin beta isoform plays a role in cell spreading and enhances the activation of JNK/SAPK in response to EGF stimulation by using its third SH3 domain.

Homo sapiens (taxid: 9606)

>sp|Q8AXV0|SH3G1_CHICK Endophilin-A2 OS=Gallus gallus GN=SH3GL1 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 31/44 (70%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +N  EL FK+GDII +  Q+D+NWYEG  N   G FP NYVE++
Sbjct: 319 ENDGELGFKEGDIITLTNQIDENWYEGMINGQSGFFPLNYVEVL 362

Implicated in endocytosis. May recruit other proteins to membranes with high curvature.

Gallus gallus (taxid: 9031)

>sp|Q5RBR0|SH3R1_PONAB E3 ubiquitin-protein ligase SH3RF1 OS=Pongo abelii GN=SH3RF1 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/40 (62%), Positives = 31/40 (77%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +L F KGDII +RRQVD+NWY GE N + G FP N+V+II
Sbjct: 152 DLKFSKGDIIILRRQVDENWYHGEVNGIHGFFPTNFVQII 191

Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes such as UBE2D1 or UBE2N and then transfers it to substrates. In the absence of an external substrate, it can catalyze self-ubiquitination. Stimulates ubiquitination of potassium channel KCNJ1, enhancing it's dynamin-dependent and clathrin-independent endocytosis.

Pongo abelii (taxid: 9601)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q7Z6J0|SH3R1_HUMAN E3 ubiquitin-protein ligase SH3RF1 OS=Homo sapiens GN=SH3RF1 PE=1 SV=2

 Score = 61.6 bits (148), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/40 (62%), Positives = 31/40 (77%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +L F KGDII +RRQVD+NWY GE N + G FP N+V+II
Sbjct: 152 DLKFSKGDIIILRRQVDENWYHGEVNGIHGFFPTNFVQII 191

Plays an essential role in the targeting of HIV-1 Gag to the plasma membrane, this function is dependent on it's RING domain, and hence it's E3 ligase activity.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
307215182	4470	Sorbin and SH3 domain-containing protein	0.631	0.031	0.6	4e-56
345488740	2222	PREDICTED: hypothetical protein LOC10012	0.631	0.063	0.594	3e-55
380028397	965	PREDICTED: uncharacterized protein LOC10	0.631	0.147	0.594	4e-54
328780855	966	PREDICTED: hypothetical protein LOC40965	0.631	0.146	0.594	4e-54
383851627	963	PREDICTED: uncharacterized protein LOC10	0.631	0.147	0.589	1e-53
307172916	1065	Sorbin and SH3 domain-containing protein	0.631	0.133	0.586	2e-52
332029655	1113	Sorbin and SH3 domain-containing protein	0.631	0.127	0.575	8e-52
328714703	1924	PREDICTED: hypothetical protein LOC10016	0.64	0.074	0.6	1e-51
350409487	902	PREDICTED: hypothetical protein LOC10074	0.631	0.157	0.589	1e-47
321468642	438	hypothetical protein DAPPUDRAFT_197424 [	0.617	0.317	0.510	3e-44

>gi|307215182|gb|EFN89954.1| Sorbin and SH3 domain-containing protein 1 [Harpegnathos saltator]

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 114/190 (60%), Positives = 125/190 (65%), Gaps = 48/190 (25%)

Query: 12   PNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSR 71
            P   V+ EVT+ YR PVR E KE +SEEELARR AE MRR+YQEERRRKYLQELHDI SR
Sbjct: 4106 PRRYVEGEVTIHYRSPVRTEAKEPLSEEELARRSAENMRRVYQEERRRKYLQELHDIDSR 4165

Query: 72   RHTDNFT------------------------------------------------ELSFK 83
            RHTDNF                                                 EL+F+
Sbjct: 4166 RHTDNFIPSQKSPIPLNRYDDFVDDLSQRSRSQDQTPEPRLVARALYNFVGQSSRELTFR 4225

Query: 84   KGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVA 143
            +GDIIFVRRQVDKNWYEGE+NAMIGLFPFNYVEI+PYD +RT PKK  EGQARAKFNFVA
Sbjct: 4226 RGDIIFVRRQVDKNWYEGEYNAMIGLFPFNYVEILPYDGMRTTPKKAHEGQARAKFNFVA 4285

Query: 144  QTHLELSLVK 153
            QT+LELSLVK
Sbjct: 4286 QTNLELSLVK 4295

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345488740|ref|XP_001605377.2| PREDICTED: hypothetical protein LOC100121771 [Nasonia vitripennis]

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 113/190 (59%), Positives = 125/190 (65%), Gaps = 48/190 (25%)

Query: 12   PNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSR 71
            P   V+ EVT+ YR PVR E KE +SEEELARR AE MRR+YQEERRRKYLQELHDI SR
Sbjct: 1859 PRRYVEGEVTIHYRSPVRAEAKEPLSEEELARRSAENMRRVYQEERRRKYLQELHDIDSR 1918

Query: 72   RHTDNFT------------------------------------------------ELSFK 83
            RHTDNF                                                 EL+F+
Sbjct: 1919 RHTDNFVPSQKSPIPLNRYDDFVDDLSYRSRSQEQTPEPRLVARALYNFVGQSPRELTFR 1978

Query: 84   KGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVA 143
            +GD+IFVRRQVDKNWYEGEHNAM+GLFPFNYVEIIPYD+IRT PKK  EGQARAKFNF+A
Sbjct: 1979 RGDLIFVRRQVDKNWYEGEHNAMVGLFPFNYVEIIPYDEIRTLPKKPYEGQARAKFNFIA 2038

Query: 144  QTHLELSLVK 153
            QT+LELSL K
Sbjct: 2039 QTNLELSLGK 2048

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028397|ref|XP_003697889.1| PREDICTED: uncharacterized protein LOC100867381 [Apis florea]

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/190 (59%), Positives = 123/190 (64%), Gaps = 48/190 (25%)

Query: 12  PNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSR 71
           P   V+ EVT+ YR PVR E KE +SEEELARR AE MRR+YQEERRRKYLQELHDI SR
Sbjct: 604 PRRYVEGEVTIHYRSPVRTEAKEPLSEEELARRSAENMRRVYQEERRRKYLQELHDIDSR 663

Query: 72  RHTDNFT------------------------------------------------ELSFK 83
           RHTDNF                                                 EL+F+
Sbjct: 664 RHTDNFIPSQKSPIPLNRYDDFVDDLSHRSRSQEQTPEPRLVARALYNFIGQSCRELNFR 723

Query: 84  KGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVA 143
           +GDIIFVRRQVDKNWYEGEHNAMIGLFP NYVEI+PYD +RT PKK  EGQARAKFNFVA
Sbjct: 724 RGDIIFVRRQVDKNWYEGEHNAMIGLFPSNYVEILPYDGMRTTPKKPYEGQARAKFNFVA 783

Query: 144 QTHLELSLVK 153
           QT+LELSL K
Sbjct: 784 QTNLELSLAK 793

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328780855|ref|XP_393153.4| PREDICTED: hypothetical protein LOC409655 [Apis mellifera]

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/190 (59%), Positives = 123/190 (64%), Gaps = 48/190 (25%)

Query: 12  PNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSR 71
           P   V+ EVT+ YR PVR E KE +SEEELARR AE MRR+YQEERRRKYLQELHDI SR
Sbjct: 605 PRRYVEGEVTIHYRSPVRTEAKEPLSEEELARRSAENMRRVYQEERRRKYLQELHDIDSR 664

Query: 72  RHTDNFT------------------------------------------------ELSFK 83
           RHTDNF                                                 EL+F+
Sbjct: 665 RHTDNFIPSQKSPIPLNRYDDFVDDLSHRSRSQEQTPEPRLVARALYNFIGQSCRELNFR 724

Query: 84  KGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVA 143
           +GDIIFVRRQVDKNWYEGEHNAMIGLFP NYVEI+PYD +RT PKK  EGQARAKFNFVA
Sbjct: 725 RGDIIFVRRQVDKNWYEGEHNAMIGLFPSNYVEILPYDGMRTTPKKPYEGQARAKFNFVA 784

Query: 144 QTHLELSLVK 153
           QT+LELSL K
Sbjct: 785 QTNLELSLAK 794

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383851627|ref|XP_003701333.1| PREDICTED: uncharacterized protein LOC100875671 [Megachile rotundata]

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/190 (58%), Positives = 122/190 (64%), Gaps = 48/190 (25%)

Query: 12  PNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSR 71
           P   V+ EVT+ YR PVR E KE +SEEELARR AE MRR+YQEERRRKYLQELHDI SR
Sbjct: 599 PRRYVEGEVTIHYRSPVRTEAKEPLSEEELARRSAENMRRVYQEERRRKYLQELHDIDSR 658

Query: 72  RHTDNFT------------------------------------------------ELSFK 83
           RHTDNF                                                 EL+F+
Sbjct: 659 RHTDNFIPSQKSPIPLNRYDDFVDDLSHRSRSQEQTPEPRLVARALYNFIGQSSRELNFR 718

Query: 84  KGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVA 143
           +GDIIFVRRQVDKNWYEGEHNAMIGLFP NYVEI+PYD +RT PKK  EGQARAKFNFVA
Sbjct: 719 RGDIIFVRRQVDKNWYEGEHNAMIGLFPSNYVEILPYDGMRTTPKKPYEGQARAKFNFVA 778

Query: 144 QTHLELSLVK 153
           QT+LEL L K
Sbjct: 779 QTNLELPLAK 788

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307172916|gb|EFN64083.1| Sorbin and SH3 domain-containing protein 1 [Camponotus floridanus]

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/191 (58%), Positives = 124/191 (64%), Gaps = 49/191 (25%)

Query: 12  PNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSR 71
           P   V+ EVT+ YR PVR E KE +SEEELARR AE MRR+YQEERRRKYLQELHDI SR
Sbjct: 700 PRRYVEGEVTIHYRSPVRTEAKEPLSEEELARRSAENMRRVYQEERRRKYLQELHDIDSR 759

Query: 72  RHTDNFT------------------------------------------------ELSFK 83
           RHTDNF                                                 EL+F+
Sbjct: 760 RHTDNFIPSQKSPIPLNRYDDFVDDLTQRSRSQDQTPEPRLIARALYNFVGQSSRELTFR 819

Query: 84  KGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDK-IRTAPKKLSEGQARAKFNFV 142
           +GDIIFVRRQVDKNWYEGE+NAMIGLFP NYVEI+PYD  +RT PKK  EGQARAKFNF+
Sbjct: 820 RGDIIFVRRQVDKNWYEGEYNAMIGLFPSNYVEILPYDGTMRTTPKKAHEGQARAKFNFI 879

Query: 143 AQTHLELSLVK 153
           AQT+LELSLVK
Sbjct: 880 AQTNLELSLVK 890

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029655|gb|EGI69544.1| Sorbin and SH3 domain-containing protein 1 [Acromyrmex echinatior]

 Score =  209 bits (531), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/191 (57%), Positives = 123/191 (64%), Gaps = 49/191 (25%)

Query: 12  PNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSR 71
           P   V+ EVT+ YR PVR E KE +SEEELARR AE MRR+YQEERRRKYLQELHDI SR
Sbjct: 748 PRRYVEGEVTIHYRSPVRTEAKEPLSEEELARRSAENMRRVYQEERRRKYLQELHDIDSR 807

Query: 72  RHTDNFT------------------------------------------------ELSFK 83
           RHTDNF                                                 EL+F+
Sbjct: 808 RHTDNFIPSQKSPIPLNRYDDFVDDLSQRSRSQDQTPEPRLVARALYNFVGQSSRELTFR 867

Query: 84  KGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDK-IRTAPKKLSEGQARAKFNFV 142
           +GD+IFVRRQVDKNWYEGE+NAMIGLFP NYVEI+PYD  +RT PKK  EGQARAKFNF+
Sbjct: 868 RGDLIFVRRQVDKNWYEGEYNAMIGLFPSNYVEILPYDGTMRTTPKKAHEGQARAKFNFI 927

Query: 143 AQTHLELSLVK 153
           AQT+LELSL K
Sbjct: 928 AQTNLELSLAK 938

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328714703|ref|XP_003245429.1| PREDICTED: hypothetical protein LOC100167639 [Acyrthosiphon pisum]

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/190 (60%), Positives = 128/190 (67%), Gaps = 46/190 (24%)

Query: 10   NRPNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDIS 69
            + P+   +SEVTLQYRRPVRNEIKE  SEEELA +QAEAMRRIYQEERRRKYLQEL D+S
Sbjct: 1559 DSPHKYAESEVTLQYRRPVRNEIKEEWSEEELANKQAEAMRRIYQEERRRKYLQELQDMS 1618

Query: 70   SRRHTDNFT----------------------------------------------ELSFK 83
            +RRH DN                                                ELSF+
Sbjct: 1619 NRRHADNLLPSQKSPIPLNRYDDFVDESPQPPRSRTPEPKLVARALYNFVGQTSRELSFR 1678

Query: 84   KGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVA 143
            KGDIIFVR+Q+DKNWYEGEHNAM+GLFPFNYVE+IPYD IRT P +  EGQARAKFNFVA
Sbjct: 1679 KGDIIFVRKQIDKNWYEGEHNAMVGLFPFNYVEVIPYDGIRTTPHRPYEGQARAKFNFVA 1738

Query: 144  QTHLELSLVK 153
            QT++ELSLVK
Sbjct: 1739 QTNMELSLVK 1748

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409487|ref|XP_003488756.1| PREDICTED: hypothetical protein LOC100740896, partial [Bombus impatiens]

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/190 (58%), Positives = 124/190 (65%), Gaps = 48/190 (25%)

Query: 12  PNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSR 71
           P   V+ EVT+ YR PVR E KE +SEEELARR AE MRR+Y+EERRRKYLQELHDI+SR
Sbjct: 620 PRRYVEGEVTIHYRSPVRTEAKEPLSEEELARRSAENMRRVYEEERRRKYLQELHDINSR 679

Query: 72  RHTDNFT------------------------------------------------ELSFK 83
           RHTDNF                                                 EL+F+
Sbjct: 680 RHTDNFIPSQKSPIPLNRYDDFVDDLSHRSRSQEQTPEPRLVAKALYNFIGQSPRELNFR 739

Query: 84  KGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVA 143
           +GDIIFVRRQVDKNWYEGEHNAMIGLFP NYVEI+PYD +RT PKK  EGQARAKFNFVA
Sbjct: 740 RGDIIFVRRQVDKNWYEGEHNAMIGLFPSNYVEILPYDGMRTTPKKPYEGQARAKFNFVA 799

Query: 144 QTHLELSLVK 153
           QT+LELSL K
Sbjct: 800 QTNLELSLAK 809

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321468642|gb|EFX79626.1| hypothetical protein DAPPUDRAFT_197424 [Daphnia pulex]

 Score =  184 bits (466), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/184 (51%), Positives = 114/184 (61%), Gaps = 45/184 (24%)

Query: 15  IVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHT 74
             +SEVT+ YR P+RN  +    +EEL + QAE MRR+Y++ERRRKY+QEL DI SRRH 
Sbjct: 81  FAESEVTIHYRSPIRNLQQSGQQQEELRQMQAEHMRRVYEQERRRKYIQELEDIESRRHM 140

Query: 75  DNFT---------------------------------------------ELSFKKGDIIF 89
           DNFT                                             ELSF+KGDIIF
Sbjct: 141 DNFTPLMKSPIPLNRYDDFMDDQPPQRDRTPEPKIVARGLYNFVAQNARELSFQKGDIIF 200

Query: 90  VRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLEL 149
           +RRQ+DKNWYEGEHNAM+G+FP NYVEI+PYD +R   +K SEG+ R KFNFVAQT +EL
Sbjct: 201 IRRQIDKNWYEGEHNAMVGIFPVNYVEIVPYDGVRLTNRKPSEGKGRVKFNFVAQTPIEL 260

Query: 150 SLVK 153
           SLVK
Sbjct: 261 SLVK 264

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
FB|FBgn0033504	2412	CAP "CAP" [Drosophila melanoga	0.333	0.031	0.68	1.4e-39
UNIPROTKB|E1C009	1006	SORBS1 "Uncharacterized protei	0.328	0.073	0.444	2.8e-19
UNIPROTKB|Q9BX66	1292	SORBS1 "Sorbin and SH3 domain-	0.328	0.057	0.444	1.1e-18
MGI|MGI:700014	1290	Sorbs1 "sorbin and SH3 domain	0.333	0.058	0.45	1.3e-18
UNIPROTKB|F1SC49	1293	SORBS1 "Uncharacterized protei	0.328	0.057	0.444	1.4e-18
UNIPROTKB|F1M820	1290	F1M820 "Uncharacterized protei	0.333	0.058	0.45	2.2e-18
UNIPROTKB|E2RDW3	1193	SORBS2 "Uncharacterized protei	0.617	0.116	0.357	3.3e-16
RGD|620061	1196	Sorbs2 "sorbin and SH3 domain	0.333	0.062	0.506	8.9e-16
UNIPROTKB|O35413	1196	Sorbs2 "Sorbin and SH3 domain-	0.333	0.062	0.506	8.9e-16
UNIPROTKB|F1RMA6	732	SORBS3 "Uncharacterized protei	0.426	0.131	0.4	9.8e-16

FB|FBgn0033504 CAP "CAP" [Drosophila melanogaster (taxid:7227)]

 Score = 268 (99.4 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
 Identities = 51/75 (68%), Positives = 61/75 (81%)

Query:    79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAK 138
             ELSF+KGD I++RRQ+D NWYEGEHNAMIGL P +YVEI+  D  RT  K+ SEGQARAK
Sbjct:  2173 ELSFRKGDTIYIRRQIDANWYEGEHNAMIGLLPASYVEIVSRDGARTPSKRPSEGQARAK 2232

Query:   139 FNFVAQTHLELSLVK 153
             +NF AQ+ +ELSL K
Sbjct:  2233 YNFQAQSGIELSLNK 2247

GO:0017166 "vinculin binding" evidence=ISS

GO:0005925 "focal adhesion" evidence=ISS

UNIPROTKB|E1C009 SORBS1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 188 (71.2 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
 Identities = 36/81 (44%), Positives = 54/81 (66%)

Query:    79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKK------LSE 132
             EL  +KGDI+++ +Q+D+NWYEGEH+  +G+FP +Y+E++P  + +  PKK      L  
Sbjct:   783 ELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRSYIELLPPAE-KAQPKKPLPLQVLEY 841

Query:   133 GQARAKFNFVAQTHLELSLVK 153
             G A AKFNF   T +E+S  K
Sbjct:   842 GDAIAKFNFNGDTQVEMSFRK 862

GO:0001725 "stress fiber" evidence=IEA

GO:0005158 "insulin receptor binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005899 "insulin receptor complex" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

UNIPROTKB|Q9BX66 SORBS1 "Sorbin and SH3 domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 191 (72.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
 Identities = 36/81 (44%), Positives = 55/81 (67%)

Query:    79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSE------ 132
             EL  +KGDI+++ +Q+D+NWYEGEH+  +G+FP  Y+E++P  + +  PKKL+       
Sbjct:   811 ELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAE-KAQPKKLTPVQVLEY 869

Query:   133 GQARAKFNFVAQTHLELSLVK 153
             G+A AKFNF   T +E+S  K
Sbjct:   870 GEAIAKFNFNGDTQVEMSFRK 890

GO:0019901 "protein kinase binding" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

GO:0005158 "insulin receptor binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005913 "cell-cell adherens junction" evidence=ISS

GO:0005924 "cell-substrate adherens junction" evidence=ISS

GO:0048041 "focal adhesion assembly" evidence=ISS

GO:0015758 "glucose transport" evidence=ISS

GO:0008286 "insulin receptor signaling pathway" evidence=ISS

GO:0045121 "membrane raft" evidence=ISS

GO:0001725 "stress fiber" evidence=ISS

GO:0043149 "stress fiber assembly" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

GO:0003779 "actin binding" evidence=TAS

GO:0005915 "zonula adherens" evidence=TAS

GO:0007160 "cell-matrix adhesion" evidence=TAS

GO:0008092 "cytoskeletal protein binding" evidence=TAS

GO:0005829 "cytosol" evidence=ISS;TAS

GO:0006936 "muscle contraction" evidence=TAS

GO:0005070 "SH3/SH2 adaptor activity" evidence=IC;ISS

GO:0046326 "positive regulation of glucose import" evidence=ISS

GO:0032869 "cellular response to insulin stimulus" evidence=ISS

GO:0046889 "positive regulation of lipid biosynthetic process" evidence=ISS

GO:0045725 "positive regulation of glycogen biosynthetic process" evidence=ISS

GO:0005899 "insulin receptor complex" evidence=IDA

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=ISS

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005925 "focal adhesion" evidence=IDA

MGI|MGI:700014 Sorbs1 "sorbin and SH3 domain containing 1" [Mus musculus (taxid:10090)]

 Score = 191 (72.3 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 36/80 (45%), Positives = 56/80 (70%)

Query:    79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP-YDKI---RTAPKKLSE-G 133
             EL  +KGD++++ RQ+D+NWYEGEH+  +G+FP  Y+E++P  +K    + AP ++ E G
Sbjct:  1067 ELPLQKGDVVYIYRQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPRKLAPVQVLEYG 1126

Query:   134 QARAKFNFVAQTHLELSLVK 153
             +A AKFNF   T +E+S  K
Sbjct:  1127 EAIAKFNFNGDTQVEMSFRK 1146

GO:0001725 "stress fiber" evidence=IDA

GO:0005070 "SH3/SH2 adaptor activity" evidence=IPI

GO:0005158 "insulin receptor binding" evidence=ISO;IDA;IPI

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005913 "cell-cell adherens junction" evidence=IDA

GO:0005924 "cell-substrate adherens junction" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0008286 "insulin receptor signaling pathway" evidence=IC;IDA

GO:0015758 "glucose transport" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0016600 "flotillin complex" evidence=IC

GO:0019901 "protein kinase binding" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0032869 "cellular response to insulin stimulus" evidence=IC;IMP

GO:0043149 "stress fiber assembly" evidence=IDA

GO:0045121 "membrane raft" evidence=IDA

GO:0045725 "positive regulation of glycogen biosynthetic process" evidence=IMP

GO:0046326 "positive regulation of glucose import" evidence=IMP

GO:0046889 "positive regulation of lipid biosynthetic process" evidence=IMP

GO:0048041 "focal adhesion assembly" evidence=IDA

GO:0090004 "positive regulation of establishment of protein localization to plasma membrane" evidence=IMP

UNIPROTKB|F1SC49 SORBS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 191 (72.3 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
 Identities = 36/81 (44%), Positives = 55/81 (67%)

Query:    79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSE------ 132
             EL  +KGDI+++ +Q+D+NWYEGEH+  +G+FP  Y+E++P  + +  PKKL+       
Sbjct:  1070 ELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAE-KAQPKKLTPVQVLEY 1128

Query:   133 GQARAKFNFVAQTHLELSLVK 153
             G+A AKFNF   T +E+S  K
Sbjct:  1129 GEAIAKFNFNGDTQVEMSFRK 1149

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0005899 "insulin receptor complex" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005158 "insulin receptor binding" evidence=IEA

GO:0001725 "stress fiber" evidence=IEA

UNIPROTKB|F1M820 F1M820 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 189 (71.6 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
 Identities = 36/80 (45%), Positives = 56/80 (70%)

Query:    79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP-YDKI---RTAPKKLSE-G 133
             EL  +KGDI+++ +Q+D+NWYEGEH+  +G+FP  Y+E++P  +K    + AP ++ E G
Sbjct:  1067 ELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLPPAEKAQPRKLAPVQVLEYG 1126

Query:   134 QARAKFNFVAQTHLELSLVK 153
             +A AKFNF   T +E+S  K
Sbjct:  1127 EAIAKFNFNGDTQVEMSFRK 1146

GO:0001725 "stress fiber" evidence=IEA

GO:0005158 "insulin receptor binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005899 "insulin receptor complex" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

UNIPROTKB|E2RDW3 SORBS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 215 (80.7 bits), Expect = 3.3e-16, P = 3.3e-16
 Identities = 54/151 (35%), Positives = 82/151 (54%)

Query:    14 SIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQE-ERRRKYLQELHDISSRR 72
             S  D +    Y       ++ L  + E  R  A  M  + +   R R+   E   + ++ 
Sbjct:   911 SFPDVDTASNYHHQDHESVQSL-QDHESPRSYASTMSDLGRSVPRDRRGTPEKEKLPAKA 969

Query:    73 HTD----NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE-IIPYDKIRTA- 126
               D       ELSFKKGD +++ R++D+NWYEGEH+  +G+FP +YVE +IP +K + A 
Sbjct:   970 VYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLIPPEKAQPAR 1029

Query:   127 ---PKKLSE-GQARAKFNFVAQTHLELSLVK 153
                P +  E G+A AK+NF A T++ELSL K
Sbjct:  1030 PPPPAQPGEIGEAMAKYNFSADTNVELSLRK 1060

GO:0008270 "zinc ion binding" evidence=IEA

RGD|620061 Sorbs2 "sorbin and SH3 domain containing 2" [Rattus norvegicus (taxid:10116)]

 Score = 202 (76.2 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
 Identities = 41/81 (50%), Positives = 59/81 (72%)

Query:    79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE-IIPYDKIRTA----PKKLSE- 132
             ELSFKKGD +++ R++D+NWYEGEH+  +G+FP +YVE + P +K + A    P +  E 
Sbjct:   977 ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPVQPGEI 1036

Query:   133 GQARAKFNFVAQTHLELSLVK 153
             G+A AK+NF A T++ELSL K
Sbjct:  1037 GEAIAKYNFNADTNVELSLRK 1057

GO:0008270 "zinc ion binding" evidence=IEA

GO:0014069 "postsynaptic density" evidence=IDA

GO:0030425 "dendrite" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

UNIPROTKB|O35413 Sorbs2 "Sorbin and SH3 domain-containing protein 2" [Rattus norvegicus (taxid:10116)]

 Score = 202 (76.2 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
 Identities = 41/81 (50%), Positives = 59/81 (72%)

Query:    79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE-IIPYDKIRTA----PKKLSE- 132
             ELSFKKGD +++ R++D+NWYEGEH+  +G+FP +YVE + P +K + A    P +  E 
Sbjct:   977 ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPVQPGEI 1036

Query:   133 GQARAKFNFVAQTHLELSLVK 153
             G+A AK+NF A T++ELSL K
Sbjct:  1037 GEAIAKYNFNADTNVELSLRK 1057

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1RMA6 SORBS3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 196 (74.1 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
 Identities = 42/105 (40%), Positives = 64/105 (60%)

Query:    54 QEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFN 113
             +EE++RK  +   D  ++       EL+ KKGDI+++ ++VDKNW EGEH+  +G+FP N
Sbjct:   439 KEEKKRKAARLKFDFQAQSPK----ELTLKKGDIVYIHKEVDKNWLEGEHHGGLGIFPAN 494

Query:   114 YVEIIPYDKIRTAPKK-----LSEGQARAKFNFVAQTHLELSLVK 153
             YVE++P D+I    K      L  G+A A++NF     +ELS  K
Sbjct:   495 YVEVLPADEIPKPIKPPTYQVLEYGEAVAQYNFKGDLEVELSFRK 539

GO:0051496 "positive regulation of stress fiber assembly" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0031589 "cell-substrate adhesion" evidence=IEA

GO:0017166 "vinculin binding" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.4.1.68	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	225
cd11781	53	cd11781, SH3_Sorbs_1, First Src Homology 3 domain	2e-19
cd11786	53	cd11786, SH3_SH3RF_1, First Src Homology 3 domain	3e-15
cd11803	55	cd11803, SH3_Endophilin_A, Src homology 3 domain o	1e-14
cd11921	55	cd11921, SH3_Vinexin_1, First Src Homology 3 domai	6e-14
cd11920	55	cd11920, SH3_Sorbs2_1, First Src Homology 3 domain	2e-13
cd11877	53	cd11877, SH3_PIX, Src Homology 3 domain of Pak Int	2e-13
cd11927	54	cd11927, SH3_SH3RF1_1, First Src Homology 3 domain	2e-12
smart00326	56	smart00326, SH3, Src homology 3 domains	5e-12
cd11919	55	cd11919, SH3_Sorbs1_1, First Src Homology 3 domain	5e-12
cd11929	54	cd11929, SH3_SH3RF2_1, First Src Homology 3 domain	2e-11
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	7e-11
cd11826	52	cd11826, SH3_Abi, Src homology 3 domain of Abl Int	2e-10
cd11782	53	cd11782, SH3_Sorbs_2, Second Src Homology 3 domain	3e-10
cd11928	54	cd11928, SH3_SH3RF3_1, First Src Homology 3 domain	5e-10
cd11805	53	cd11805, SH3_GRB2_like_C, C-terminal Src homology	7e-10
cd11971	59	cd11971, SH3_Abi1, Src homology 3 domain of Abl In	9e-10
cd11840	53	cd11840, SH3_Intersectin_5, Fifth Src homology 3 d	9e-10
cd11972	61	cd11972, SH3_Abi2, Src homology 3 domain of Abl In	1e-09
cd12061	54	cd12061, SH3_betaPIX, Src Homology 3 domain of bet	4e-09
cd11869	54	cd11869, SH3_p40phox, Src Homology 3 domain of the	4e-09
cd11809	53	cd11809, SH3_srGAP, Src homology 3 domain of Slit-	9e-09
cd11995	54	cd11995, SH3_Intersectin1_5, Fifth Src homology 3	1e-08
cd11996	54	cd11996, SH3_Intersectin2_5, Fifth Src homology 3	1e-08
cd11787	53	cd11787, SH3_SH3RF_2, Second Src Homology 3 domain	2e-08
cd11949	53	cd11949, SH3_GRB2_C, C-terminal Src homology 3 dom	2e-08
cd11956	55	cd11956, SH3_srGAP4, Src homology 3 domain of Slit	2e-08
cd11923	57	cd11923, SH3_Sorbs2_2, Second Src Homology 3 domai	4e-08
cd11875	55	cd11875, SH3_CD2AP-like_3, Third Src Homology 3 do	4e-08
cd11819	54	cd11819, SH3_Cortactin_like, Src homology 3 domain	5e-08
cd11820	54	cd11820, SH3_STAM, Src homology 3 domain of Signal	5e-08
cd11964	55	cd11964, SH3_STAM1, Src homology 3 domain of Signa	6e-08
cd11873	53	cd11873, SH3_CD2AP-like_1, First Src Homology 3 do	7e-08
cd11823	53	cd11823, SH3_Nostrin, Src homology 3 domain of Nit	8e-08
cd11963	57	cd11963, SH3_STAM2, Src homology 3 domain of Signa	1e-07
cd11922	58	cd11922, SH3_Sorbs1_2, Second Src Homology 3 domai	1e-07
cd12046	53	cd12046, SH3_p67phox_C, C-terminal (or second) Src	1e-07
cd11951	53	cd11951, SH3_GRAP_C, C-terminal Src homology 3 dom	1e-07
cd12060	58	cd12060, SH3_alphaPIX, Src Homology 3 domain of al	2e-07
cd12142	55	cd12142, SH3_D21-like, Src Homology 3 domain of SH	2e-07
cd11841	54	cd11841, SH3_SH3YL1_like, Src homology 3 domain of	2e-07
cd11932	57	cd11932, SH3_SH3RF2_2, Second Src Homology 3 domai	4e-07
cd11874	53	cd11874, SH3_CD2AP-like_2, Second Src Homology 3 d	4e-07
cd11772	53	cd11772, SH3_OSTF1, Src Homology 3 domain of metaz	4e-07
cd11842	55	cd11842, SH3_Ysc84p_like, Src homology 3 domain of	4e-07
cd11960	54	cd11960, SH3_Abp1_eu, Src homology 3 domain of eum	5e-07
cd11870	53	cd11870, SH3_p67phox-like_C, C-terminal Src Homolo	6e-07
cd11959	53	cd11959, SH3_Cortactin, Src homology 3 domain of C	6e-07
cd11806	53	cd11806, SH3_PRMT2, Src homology 3 domain of Prote	8e-07
cd11961	53	cd11961, SH3_Abp1_fungi_C2, Second C-terminal Src	1e-06
pfam00018	47	pfam00018, SH3_1, SH3 domain	1e-06
pfam07653	53	pfam07653, SH3_2, Variant SH3 domain	1e-06
cd11815	52	cd11815, SH3_Eve1_2, Second Src homology 3 domain	2e-06
cd11829	52	cd11829, SH3_GAS7, Src homology 3 domain of Growth	2e-06
cd11766	53	cd11766, SH3_Nck_2, Second Src Homology 3 domain o	3e-06
cd11924	56	cd11924, SH3_Vinexin_2, Second Src Homology 3 doma	3e-06
cd11796	51	cd11796, SH3_DNMBP_N3, Third N-terminal Src homolo	3e-06
cd11804	52	cd11804, SH3_GRB2_like_N, N-terminal Src homology	3e-06
cd11884	56	cd11884, SH3_MYO15, Src Homology 3 domain of Myosi	4e-06
cd12057	56	cd12057, SH3_CIN85_3, Third Src Homology 3 domain	5e-06
cd11839	58	cd11839, SH3_Intersectin_4, Fourth Src homology 3	5e-06
cd11818	50	cd11818, SH3_Eve1_5, Fifth Src homology 3 domain o	6e-06
cd11817	50	cd11817, SH3_Eve1_4, Fourth Src homology 3 domain	6e-06
cd11816	51	cd11816, SH3_Eve1_3, Third Src homology 3 domain o	8e-06
cd12073	55	cd12073, SH3_HS1, Src homology 3 domain of Hematop	8e-06
cd11930	55	cd11930, SH3_SH3RF1_2, Second Src Homology 3 domai	1e-05
cd11762	57	cd11762, SH3_FCHSD_2, Second Src Homology 3 domain	1e-05
cd11769	57	cd11769, SH3_CSK, Src Homology 3 domain of C-termi	1e-05
cd11830	54	cd11830, SH3_VAV_2, C-terminal (or second) Src hom	1e-05
cd11946	56	cd11946, SH3_GRB2_N, N-terminal Src homology 3 dom	1e-05
cd11955	53	cd11955, SH3_srGAP1-3, Src homology 3 domain of Sl	1e-05
cd11950	53	cd11950, SH3_GRAP2_C, C-terminal Src homology 3 do	2e-05
cd11851	62	cd11851, SH3_RIM-BP, Src homology 3 domains of Rab	2e-05
cd11824	53	cd11824, SH3_PSTPIP1, Src homology 3 domain of Pro	2e-05
cd11810	50	cd11810, SH3_RUSC1_like, Src homology 3 domain of	2e-05
cd11821	53	cd11821, SH3_ASAP, Src homology 3 domain of ArfGAP	3e-05
cd11889	53	cd11889, SH3_Cyk3p-like, Src Homology 3 domain of	3e-05
cd11827	53	cd11827, SH3_MyoIe_If_like, Src homology 3 domain	4e-05
cd11882	54	cd11882, SH3_GRAF-like, Src Homology 3 domain of G	4e-05
cd11977	58	cd11977, SH3_VAV2_2, C-terminal (or second) Src ho	5e-05
cd11931	55	cd11931, SH3_SH3RF3_2, Second Src Homology 3 domai	5e-05
cd12047	53	cd12047, SH3_Noxa1_C, C-terminal Src Homology 3 do	5e-05
cd12054	55	cd12054, SH3_CD2AP_2, Second Src Homology 3 domain	6e-05
cd11785	55	cd11785, SH3_SH3RF_C, C-terminal (Fourth) Src Homo	6e-05
cd12055	53	cd12055, SH3_CIN85_2, Second Src Homology 3 domain	6e-05
cd11837	53	cd11837, SH3_Intersectin_2, Second Src homology 3	7e-05
cd11976	54	cd11976, SH3_VAV1_2, C-terminal (or second) Src ho	7e-05
cd11838	52	cd11838, SH3_Intersectin_3, Third Src homology 3 d	9e-05
cd12044	53	cd12044, SH3_SKAP1, Src Homology 3 domain of Src K	9e-05
cd12056	57	cd12056, SH3_CD2AP_3, Third Src Homology 3 domain	9e-05
cd11789	55	cd11789, SH3_Nebulin_family_C, C-terminal Src Homo	9e-05
cd11763	55	cd11763, SH3_SNX9_like, Src Homology 3 domain of S	1e-04
cd11813	53	cd11813, SH3_SGSM3, Src Homology 3 domain of Small	1e-04
cd11836	55	cd11836, SH3_Intersectin_1, First Src homology 3 d	1e-04
cd12013	61	cd12013, SH3_RIM-BP_3, Third Src homology 3 domain	1e-04
cd11978	56	cd11978, SH3_VAV3_2, C-terminal (or second) Src ho	1e-04
cd11843	53	cd11843, SH3_PACSIN, Src homology 3 domain of Prot	1e-04
cd12012	62	cd12012, SH3_RIM-BP_2, Second Src homology 3 domai	1e-04
cd11991	52	cd11991, SH3_Intersectin1_3, Third Src homology 3	1e-04
cd11778	51	cd11778, SH3_Bzz1_2, Second Src Homology 3 domain	1e-04
cd11825	54	cd11825, SH3_PLCgamma, Src homology 3 domain of Ph	2e-04
cd12045	53	cd12045, SH3_SKAP2, Src Homology 3 domain of Src K	2e-04
cd11947	52	cd11947, SH3_GRAP2_N, N-terminal Src homology 3 do	2e-04
cd11866	53	cd11866, SH3_SKAP1-like, Src Homology 3 domain of	2e-04
cd11901	55	cd11901, SH3_Nck1_2, Second Src Homology 3 domain	2e-04
cd11771	60	cd11771, SH3_Pex13p_fungal, Src Homology 3 domain	3e-04
cd11793	55	cd11793, SH3_ephexin1_like, Src homology 3 domain	3e-04
cd11828	53	cd11828, SH3_ARHGEF9_like, Src homology 3 domain o	4e-04
cd11902	55	cd11902, SH3_Nck2_2, Second Src Homology 3 domain	4e-04
cd11887	60	cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 a	4e-04
cd11915	59	cd11915, SH3_Irsp53, Src Homology 3 domain of Insu	4e-04
cd12052	53	cd12052, SH3_CIN85_1, First Src Homology 3 domain	5e-04
cd11933	58	cd11933, SH3_Nebulin_C, C-terminal Src Homology 3	7e-04
cd11780	55	cd11780, SH3_Sorbs_3, Third (or C-terminal) Src Ho	8e-04
cd11990	52	cd11990, SH3_Intersectin2_2, Second Src homology 3	9e-04
cd11934	59	cd11934, SH3_Lasp1_C, C-terminal Src Homology 3 do	0.001
cd11855	55	cd11855, SH3_Sho1p, Src homology 3 domain of High	0.001
cd11958	51	cd11958, SH3_RUSC1, Src homology 3 domain of RUN a	0.001
cd11883	55	cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25	0.001
cd11782	53	cd11782, SH3_Sorbs_2, Second Src Homology 3 domain	0.002
cd11975	62	cd11975, SH3_ARHGEF9, Src homology 3 domain of the	0.002
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	0.002
cd11759	57	cd11759, SH3_CRK_C, C-terminal Src Homology 3 doma	0.002
cd12059	58	cd12059, SH3_MLK1-3, Src Homology 3 domain of Mixe	0.002
cd11993	65	cd11993, SH3_Intersectin1_4, Fourth Src homology 3	0.002
cd11833	53	cd11833, SH3_Stac_1, First C-terminal Src homology	0.003
cd11757	52	cd11757, SH3_SH3BP4, Src Homology 3 domain of SH3	0.003
cd11948	54	cd11948, SH3_GRAP_N, N-terminal Src homology 3 dom	0.003
cd11988	57	cd11988, SH3_Intersectin2_1, First Src homology 3	0.003
cd11957	52	cd11957, SH3_RUSC2, Src homology 3 domain of RUN a	0.003
cd11926	55	cd11926, SH3_SH3RF1_3, Third Src Homology 3 domain	0.004

>gnl|CDD|212715 cd11781, SH3_Sorbs_1, First Src Homology 3 domain of Sorbin and SH3 domain containing (Sorbs) proteins and similar domains

 Score = 78.2 bits (193), Expect = 2e-19
 Identities = 29/42 (69%), Positives = 36/42 (85%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           +  ELS KKGDII++RRQ+DKNWYEGEHN  +G+FP +YVEI
Sbjct: 12  SAKELSLKKGDIIYIRRQIDKNWYEGEHNGRVGIFPASYVEI 53

This family, also called the vinexin family, is composed predominantly of adaptor proteins containing one sorbin homology (SoHo) and three SH3 domains. Members include the first SH3 domains of Sorbs1 (or ponsin), Sorbs2 (or ArgBP2), Vinexin (or Sorbs3), and similar domains. They are involved in the regulation of cytoskeletal organization, cell adhesion, and growth factor signaling. Members of this family bind multiple partners including signaling molecules like c-Abl, c-Arg, Sos, and c-Cbl, as well as cytoskeletal molecules such as vinculin and afadin. They may have overlapping functions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212720 cd11786, SH3_SH3RF_1, First Src Homology 3 domain of SH3 domain containing ring finger proteins

 Score = 67.0 bits (164), Expect = 3e-15
 Identities = 22/39 (56%), Positives = 31/39 (79%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           +LSFKKGDII +R+++D+NWY GE N   G FP +YV++
Sbjct: 15  DLSFKKGDIILLRKRIDENWYHGECNGKQGFFPASYVQV 53

This model represents the first SH3 domain of SH3RF1 (or POSH), SH3RF2 (or POSHER), SH3RF3 (POSH2), and similar domains. Members of this family are scaffold proteins that function as E3 ubiquitin-protein ligases. They all contain an N-terminal RING finger domain and multiple SH3 domains; SH3RF1 and SH3RF3 have four SH3 domains while SH3RF2 has three. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3RF2 acts as an anti-apoptotic regulator of the JNK pathway by binding to and promoting the degradation of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212737 cd11803, SH3_Endophilin_A, Src homology 3 domain of Endophilin-A

 Score = 65.4 bits (160), Expect = 1e-14
 Identities = 24/44 (54%), Positives = 31/44 (70%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +N  EL FK+GDII +  Q+D+NWYEG  N   G FP NYVE++
Sbjct: 12  ENEGELGFKEGDIITLTNQIDENWYEGMVNGQSGFFPVNYVEVL 55

Endophilins play roles in synaptic vesicle formation, virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. They are classified into two types, A and B. Vertebrates contain three endophilin-A isoforms (A1, A2, and A3). Endophilin-A proteins are enriched in the brain and play multiple roles in receptor-mediated endocytosis. They tubulate membranes and regulate calcium influx into neurons to trigger the activation of the endocytic machinery. They are also involved in the sorting of plasma membrane proteins, actin filament assembly, and the uncoating of clathrin-coated vesicles for fusion with endosomes. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212854 cd11921, SH3_Vinexin_1, First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

 Score = 63.8 bits (155), Expect = 6e-14
 Identities = 22/40 (55%), Positives = 34/40 (85%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+ +KGDI+++ ++VDKNW EGEH+  +G+FP NYVE++
Sbjct: 16  ELTLQKGDIVYIHKEVDKNWLEGEHHGRVGIFPANYVEVL 55

Vinexin is also called Sorbs3, SH3P3, and SH3-containing adapter molecule 1 (SCAM-1). It is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. Vinexin was first identified as a vinculin binding protein; it is co-localized with vinculin at cell-ECM and cell-cell adhesion sites. There are several splice variants of vinexin: alpha, which contains the SoHo and three SH3 domains and displays tissue-specific expression; and beta, which contains only the three SH3 domains and is widely expressed. Vinexin alpha stimulates the accumulation of F-actin at focal contact sites. Vinexin also promotes keratinocyte migration and wound healing. The SH3 domains of vinexin have been reported to bind a number of ligands including vinculin, WAVE2, DLG5, Abl, and Cbl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212853 cd11920, SH3_Sorbs2_1, First Src Homology 3 domain of Sorbin and SH3 domain containing 2 (Sorbs2), also called Arg-binding protein 2 (ArgBP2)

 Score = 62.7 bits (152), Expect = 2e-13
 Identities = 23/38 (60%), Positives = 33/38 (86%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           ELSFKKGD +++ R++D+NWYEGEH+  +G+FP +YVE
Sbjct: 16  ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVE 53

Sorbs2 or ArgBP2 is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. It regulates actin-dependent processes including cell adhesion, morphology, and migration. It is expressed in many tissues and is abundant in the heart. Like vinexin, it is found in focal adhesion where it interacts with vinculin and afadin. It also localizes in epithelial cell stress fibers and in cardiac muscle cell Z-discs. Sorbs2 has been implicated to play roles in the signaling of c-Arg, Akt, and Pyk2. Other interaction partners of Sorbs2 include c-Abl, flotillin, spectrin, dynamin 1/2, synaptojanin, PTP-PEST, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212810 cd11877, SH3_PIX, Src Homology 3 domain of Pak Interactive eXchange factors

 Score = 62.3 bits (152), Expect = 2e-13
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 71  RRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
             + D   ELSF KGDII V + V+  W+EG  N   G FP NYV+ 
Sbjct: 10  GTNED---ELSFDKGDIITVTQVVEGGWWEGTLNGKTGWFPSNYVKE 53

PIX proteins are Rho guanine nucleotide exchange factors (GEFs), which activate small GTPases by exchanging bound GDP for free GTP. They act as GEFs for both Cdc42 and Rac 1, and have been implicated in cell motility, adhesion, neurite outgrowth, and cell polarity. Vertebrates contain two proteins from the PIX subfamily, alpha-PIX and beta-PIX. Alpha-PIX, also called ARHGEF6, is localized in dendritic spines where it regulates spine morphogenesis. Mutations in the ARHGEF6 gene cause X-linked intellectual disability in humans. Beta-PIX play roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212860 cd11927, SH3_SH3RF1_1, First Src Homology 3 domain of SH3 domain containing ring finger protein 1, an E3 ubiquitin-protein ligase

 Score = 59.6 bits (144), Expect = 2e-12
 Identities = 24/39 (61%), Positives = 30/39 (76%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           +L F KGDII +RRQVD+NWY GE N + G FP N+V+I
Sbjct: 16  DLKFSKGDIIILRRQVDENWYHGEVNGIHGFFPTNFVQI 54

SH3RF1 is also called POSH (Plenty of SH3s) or SH3MD2 (SH3 multiple domains protein 2). It is a scaffold protein that acts as an E3 ubiquitin-protein ligase. It plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF1 also enhances the ubiquitination of ROMK1 potassium channel resulting in its increased endocytosis. It contains an N-terminal RING finger domain and four SH3 domains. This model represents the first SH3 domain, located at the N-terminal half, of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAM-IGLFPFNYVE 116
           ELSFKKGDII V  + D  W++G       GLFP NYVE
Sbjct: 18  ELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVE 56

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|212852 cd11919, SH3_Sorbs1_1, First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin

 Score = 58.4 bits (141), Expect = 5e-12
 Identities = 20/40 (50%), Positives = 34/40 (85%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL  +KGDI+++ +Q+D+NWYEGEH+  +G+FP +Y+E++
Sbjct: 16  ELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRSYIELL 55

Sorbs1 is also called ponsin, SH3P12, or CAP (c-Cbl associated protein). It is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. It binds Cbl and plays a major role in regulating the insulin signaling pathway by enhancing insulin-induced phosphorylation of Cbl. Sorbs1, like vinexin, localizes at cell-ECM and cell-cell adhesion sites where it binds vinculin, paxillin, and afadin. It may function in the control of cell motility. Other interaction partners of Sorbs1 include c-Abl, Sos, flotillin, Grb4, ataxin-7, filamin C, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212862 cd11929, SH3_SH3RF2_1, First Src Homology 3 domain of SH3 domain containing ring finger 2

 Score = 56.9 bits (137), Expect = 2e-11
 Identities = 22/42 (52%), Positives = 31/42 (73%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           N  +L F KGD+I +RRQ+D+NWY GE N + G+FP + VE+
Sbjct: 13  NPGDLKFNKGDVILLRRQLDENWYLGEINGVSGIFPASSVEV 54

SH3RF2 is also called POSHER (POSH-eliminating RING protein) or HEPP1 (heart protein phosphatase 1-binding protein). It acts as an anti-apoptotic regulator of the JNK pathway by binding to and promoting the degradation of SH3RF1 (or POSH), a scaffold protein that is required for pro-apoptotic JNK activation. It may also play a role in cardiac functions together with protein phosphatase 1. SH3RF2 contains an N-terminal RING finger domain and three SH3 domains. This model represents the first SH3 domain, located at the N-terminal half, of SH3RF2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 55.2 bits (134), Expect = 7e-11
 Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNY 114
           ELSFKKGDII V  + D  W+EGE +    GLFP NY
Sbjct: 15  ELSFKKGDIITVLEKDDDGWWEGELNGGREGLFPANY 51

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|212760 cd11826, SH3_Abi, Src homology 3 domain of Abl Interactor proteins

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 23/38 (60%), Positives = 29/38 (76%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           ELSF++GDII+V ++ D  WYEG  N + GLFP NYVE
Sbjct: 15  ELSFQEGDIIYVTKKNDDGWYEGVLNGVTGLFPGNYVE 52

Abl interactor (Abi) proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. They localize to sites of actin polymerization in epithelial adherens junction and immune synapses, as well as to the leading edge of lamellipodia. Vertebrates contain two Abi proteins, Abi1 and Abi2. Abi1 displays a wide expression pattern while Abi2 is highly expressed in the eye and brain. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212716 cd11782, SH3_Sorbs_2, Second Src Homology 3 domain of Sorbin and SH3 domain containing (Sorbs) proteins and similar domains

 Score = 53.5 bits (129), Expect = 3e-10
 Identities = 21/39 (53%), Positives = 30/39 (76%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSF+KGD+I + R+VD+NWYEG      G+FP +YV++
Sbjct: 15  ELSFRKGDVITLTRRVDENWYEGRIGGRQGIFPVSYVQV 53

This family, also called the vinexin family, is composed predominantly of adaptor proteins containing one sorbin homology (SoHo) and three SH3 domains. Members include the second SH3 domains of Sorbs1 (or ponsin), Sorbs2 (or ArgBP2), Vinexin (or Sorbs3), and similar domains. They are involved in the regulation of cytoskeletal organization, cell adhesion, and growth factor signaling. Members of this family bind multiple partners including signaling molecules like c-Abl, c-Arg, Sos, and c-Cbl, as well as cytoskeletal molecules such as vinculin and afadin. They may have overlapping functions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212861 cd11928, SH3_SH3RF3_1, First Src Homology 3 domain of SH3 domain containing ring finger 3, an E3 ubiquitin-protein ligase

 Score = 53.4 bits (128), Expect = 5e-10
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           +L F KGDII +RR+VD+NWY GE N   G  P +Y++
Sbjct: 16  DLKFNKGDIIILRRKVDENWYHGELNGCHGFLPASYIQ 53

SH3RF3 is also called POSH2 (Plenty of SH3s 2) or SH3MD4 (SH3 multiple domains protein 4). It is a scaffold protein with E3 ubiquitin-protein ligase activity. It was identified in the screen for interacting partners of p21-activated kinase 2 (PAK2). It may play a role in regulating JNK mediated apoptosis in certain conditions. It also interacts with GTP-loaded Rac1. SH3RF3 is highly homologous to SH3RF1; it also contains an N-terminal RING finger domain and four SH3 domains. This model represents the first SH3 domain, located at the N-terminal half, of SH3RF3. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212739 cd11805, SH3_GRB2_like_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 52.6 bits (127), Expect = 7e-10
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           EL F++GDII V    D +W++GE    +G+FP NYV+
Sbjct: 15  ELEFRRGDIITVLDSSDPDWWKGELRGRVGIFPANYVQ 52

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The C-terminal SH3 domains (SH3c) of GRB2 and GRAP2 have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212904 cd11971, SH3_Abi1, Src homology 3 domain of Abl Interactor 1

 Score = 52.7 bits (126), Expect = 9e-10
 Identities = 24/44 (54%), Positives = 29/44 (65%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           D   ELSF +G II+V ++ D  WYEG  N + GLFP NYVE I
Sbjct: 11  DKDDELSFMEGAIIYVIKKNDDGWYEGVCNGVTGLFPGNYVESI 54

Abi1, also called e3B1, is a central regulator of actin cytoskeletal reorganization through interactions with many protein complexes. It is part of WAVE, a nucleation-promoting factor complex, that links Rac 1 activation to actin polymerization causing lamellipodia protrusion at the plasma membrane. Abi1 interact with formins to promote protrusions at the leading edge of motile cells. It also is a target of alpha4 integrin, regulating membrane protrusions at sites of integrin engagement. Abi proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212774 cd11840, SH3_Intersectin_5, Fifth Src homology 3 domain (or SH3E) of Intersectin

 Score = 52.4 bits (126), Expect = 9e-10
 Identities = 24/41 (58%), Positives = 28/41 (68%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           N  ELSF+KGDII V  + D +W+ GE N   GLFP NYVE
Sbjct: 12  NEDELSFQKGDIINVLSKDDPDWWRGELNGQTGLFPSNYVE 52

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The fifth SH3 domain (or SH3E) of ITSN1 has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212905 cd11972, SH3_Abi2, Src homology 3 domain of Abl Interactor 2

 Score = 52.3 bits (125), Expect = 1e-09
 Identities = 24/44 (54%), Positives = 30/44 (68%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           D   ELSF++G II+V ++ D  WYEG  N + GLFP NYVE I
Sbjct: 14  DKEDELSFQEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESI 57

Abi2 is highly expressed in the brain and eye. It regulates actin cytoskeletal reorganization at adherens junctions and dendritic spines, which is important in cell morphogenesis, migration, and cognitive function. Mice deficient with Abi2 show defects in orientation and migration of lens fibers, neuronal migration, dendritic spine morphology, as well as deficits in learning and memory. Abi proteins are adaptor proteins serving as binding partners and substrates of Abl tyrosine kinases. They are involved in regulating actin cytoskeletal reorganization and play important roles in membrane-ruffling, endocytosis, cell motility, and cell migration. Abi proteins contain a homeobox homology domain, a proline-rich region, and a SH3 domain. The SH3 domain of Abi binds to a PxxP motif in Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|212994 cd12061, SH3_betaPIX, Src Homology 3 domain of beta-Pak Interactive eXchange factor

 Score = 50.8 bits (121), Expect = 4e-09
 Identities = 22/40 (55%), Positives = 25/40 (62%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           N  ELSF KGD+I V R  +  W+EG HN   G FP NYV
Sbjct: 12  NEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYV 51

Beta-PIX, also called Rho guanine nucleotide exchange factor 7 (ARHGEF7) or Cool (Cloned out of Library)-1, activates small GTPases by exchanging bound GDP for free GTP. It acts as a GEF for both Cdc42 and Rac 1, and plays important roles in regulating neuroendocrine exocytosis, focal adhesion maturation, cell migration, synaptic vesicle localization, and insulin secretion. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212802 cd11869, SH3_p40phox, Src Homology 3 domain of the p40phox subunit of NADPH oxidase

 Score = 50.6 bits (121), Expect = 4e-09
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+FK GD+IF+  +V+K+W EG      G+FP ++V+II
Sbjct: 15  ELNFKAGDVIFLLSRVNKDWLEGTVRGATGIFPLSFVKII 54

p40phox, also called Neutrophil cytosol factor 4 (NCF-4), is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) which plays a crucial role in the cellular response to bacterial infection. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p40phox positively regulates NADPH oxidase in both phosphatidylinositol-3-phosphate (PI3P)-dependent and PI3P-independent manner. It contains an N-terminal PX domain, a central SH3 domain, and a C-terminal PB1 domain that interacts with p67phox. The SH3 domain of p40phox binds to canonical polyproline and noncanonical motifs at the C-terminus of p47phox. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212743 cd11809, SH3_srGAP, Src homology 3 domain of Slit-Robo GTPase Activating Proteins

 Score = 49.7 bits (119), Expect = 9e-09
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           ELSFKKGD + + RQV  +W+ G+ N   GL P  Y+
Sbjct: 15  ELSFKKGDSLTLYRQVSDDWWRGQLNGQDGLVPHKYI 51

Slit-Robo GTPase Activating Proteins (srGAPs) are Rho GAPs that interact with Robo1, the transmembrane receptor of Slit proteins. Slit proteins are secreted proteins that control axon guidance and the migration of neurons and leukocytes. Vertebrates contain three isoforms of srGAPs (srGAP1-3), all of which are expressed during embryonic and early development in the nervous system but with different localization and timing. A fourth member has also been reported (srGAP4, also called ARHGAP4). srGAPs contain an N-terminal F-BAR domain, a Rho GAP domain, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212928 cd11995, SH3_Intersectin1_5, Fifth Src homology 3 domain (or SH3E) of Intersectin-1

 Score = 50.0 bits (119), Expect = 1e-08
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           N  EL+F KG II V  + D +W++GE N  +GLFP NYV++
Sbjct: 13  NDDELAFSKGQIINVLNKEDPDWWKGELNGQVGLFPSNYVKL 54

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The fifth SH3 domain (or SH3E) of ITSN1 has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212929 cd11996, SH3_Intersectin2_5, Fifth Src homology 3 domain (or SH3E) of Intersectin-2

 Score = 49.2 bits (117), Expect = 1e-08
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           +N  ELSF KG +I V  + D +W++GE N + GLFP NYV++
Sbjct: 12  NNEDELSFSKGQLINVLNKDDPDWWQGEINGVTGLFPSNYVKM 54

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The fifth SH3 domain (or SH3E) of ITSN2 is expected to bind protein partners, similar to ITSN1 which has been shown to bind many protein partners including SGIP1, Sos1, dynamin1/2, CIN85, c-Cbl, SHIP2, N-WASP, and synaptojanin-1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212721 cd11787, SH3_SH3RF_2, Second Src Homology 3 domain of SH3 domain containing ring finger proteins

 Score = 49.3 bits (118), Expect = 2e-08
 Identities = 19/35 (54%), Positives = 26/35 (74%)

Query: 80  LSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNY 114
           L+FKKGD+I V R+VD+NW EG     IG+FP ++
Sbjct: 19  LTFKKGDVITVIRRVDENWAEGRLGDKIGIFPISF 53

This model represents the second SH3 domain of SH3RF1 (or POSH), SH3RF2 (or POSHER), SH3RF3 (POSH2), and similar domains. Members of this family are scaffold proteins that function as E3 ubiquitin-protein ligases. They all contain an N-terminal RING finger domain and multiple SH3 domains; SH3RF1 and SH3RF3 have four SH3 domains while SH3RF2 has three. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3RF2 acts as an anti-apoptotic regulator of the JNK pathway by binding to and promoting the degradation of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212882 cd11949, SH3_GRB2_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 48.7 bits (116), Expect = 2e-08
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           EL F++GD I V    D NW++G  +   G+FP NYV 
Sbjct: 15  ELGFRRGDFIEVMDNSDPNWWKGACHGQTGMFPRNYVT 52

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRB2 binds to Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, as well as to the proline-rich C-terminus of FGRF2. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212889 cd11956, SH3_srGAP4, Src homology 3 domain of Slit-Robo GTPase Activating Protein 4

 Score = 48.7 bits (116), Expect = 2e-08
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
            ELSFK+GD++ +  +   +W+ GEHN M GL P  Y+ +
Sbjct: 16  QELSFKRGDVLLLHSKASSDWWRGEHNGMRGLIPHKYISV 55

srGAP4, also called ARHGAP4, is highly expressed in hematopoietic cells and may play a role in lymphocyte differentiation. It is able to stimulate the GTPase activity of Rac1, Cdc42, and RhoA. In the nervous system, srGAP4 has been detected in differentiating neurites and may be involved in axon and dendritic growth. srGAPs are Rho GAPs that interact with Robo1, the transmembrane receptor of Slit proteins. Slit proteins are secreted proteins that control axon guidance and the migration of neurons and leukocytes. srGAPs contain an N-terminal F-BAR domain, a Rho GAP domain, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212856 cd11923, SH3_Sorbs2_2, Second Src Homology 3 domain of Sorbin and SH3 domain containing 2 (Sorbs2), also called Arg-binding protein 2 (ArgBP2)

 Score = 48.4 bits (115), Expect = 4e-08
 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEII 118
           D   ELS +KGD + + +QVD+NWYEG+       G+FP +YVE+I
Sbjct: 12  DTNVELSLRKGDRVVLLKQVDQNWYEGKIPGTNRQGIFPVSYVEVI 57

Sorbs2 or ArgBP2 is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. It regulates actin-dependent processes including cell adhesion, morphology, and migration. It is expressed in many tissues and is abundant in the heart. Like vinexin, it is found in focal adhesion where it interacts with vinculin and afadin. It also localizes in epithelial cell stress fibers and in cardiac muscle cell Z-discs. Sorbs2 has been implicated to play roles in the signaling of c-Arg, Akt, and Pyk2. Other interaction partners of Sorbs2 include c-Abl, flotillin, spectrin, dynamin 1/2, synaptojanin, PTP-PEST, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212808 cd11875, SH3_CD2AP-like_3, Third Src Homology 3 domain (SH3C) of CD2-associated protein and similar proteins

 Score = 48.1 bits (115), Expect = 4e-08
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)

Query: 79  ELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEI 117
           EL+ ++GDI+ +  +   DK W++GE N   G+FP N+VE 
Sbjct: 15  ELTLREGDIVTILSKDCEDKGWWKGELNGKRGVFPDNFVEP 55

This subfamily is composed of the third SH3 domain (SH3C) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3C of both proteins have been shown to bind to ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212753 cd11819, SH3_Cortactin_like, Src homology 3 domain of Cortactin and related proteins

 Score = 47.7 bits (114), Expect = 5e-08
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNA-MIGLFPFNYVEI 117
            E+SF +GDII    Q+D+ W+ G +     GLFP NYVE+
Sbjct: 14  NEISFVEGDIITQIEQIDEGWWLGVNAKGQKGLFPANYVEL 54

This subfamily includes cortactin, Abp1 (actin-binding protein 1), hematopoietic lineage cell-specific protein 1 (HS1), and similar proteins. These proteins are involved in regulating actin dynamics through direct or indirect interaction with the Arp2/3 complex, which is required to initiate actin polymerization. They all contain at least one C-terminal SH3 domain. Cortactin and HS1 bind Arp2/3 and actin through an N-terminal region that contains an acidic domain and several copies of a repeat domain found in cortactin and HS1. Abp1 binds actin via an N-terminal actin-depolymerizing factor (ADF) homology domain. Yeast Abp1 binds Arp2/3 directly through two acidic domains. Mammalian Abp1 does not directly interact with Arp2/3; instead, it regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. The C-terminal region of these proteins acts as an adaptor or scaffold that can connect membrane trafficking and signaling proteins that bind the SH3 domain within the actin network. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212754 cd11820, SH3_STAM, Src homology 3 domain of Signal Transducing Adaptor Molecules

 Score = 47.8 bits (114), Expect = 5e-08
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 2/41 (4%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           DN  EL+FK G+II V    D NW++G ++   GLFP N+V
Sbjct: 14  DN--ELTFKAGEIITVLDDSDPNWWKGSNHRGEGLFPANFV 52

STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. There are two vertebrate STAMs, STAM1 and STAM2, which may be functionally redundant; vertebrate STAMs contain ITAM motifs. They are part of the endosomal sorting complex required for transport (ESCRT-0). STAM2 deficiency in mice did not cause any obvious abnormality, while STAM1 deficiency resulted in growth retardation. Loss of both STAM1 and STAM2 in mice proved lethal, indicating that STAMs are important for embryonic development. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212897 cd11964, SH3_STAM1, Src homology 3 domain of Signal Transducing Adaptor Molecule 1

 Score = 47.6 bits (113), Expect = 6e-08
 Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 2/41 (4%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           DN  EL+FK GDII +    D NW++GE     GLFP N+V
Sbjct: 14  DN--ELTFKAGDIITILDDSDPNWWKGETPQGTGLFPSNFV 52

STAM1 is part of the endosomal sorting complex required for transport (ESCRT-0) and is involved in sorting ubiquitinated cargo proteins from the endosome. It may also be involved in the regulation of IL2 and GM-CSF mediated signaling, and has been implicated in neural cell survival. STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212806 cd11873, SH3_CD2AP-like_1, First Src Homology 3 domain (SH3A) of CD2-associated protein and similar proteins

 Score = 47.3 bits (113), Expect = 7e-08
 Identities = 16/39 (41%), Positives = 27/39 (69%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           EL+ K GDII   +++++ W+EG  N   G+FP N+V++
Sbjct: 15  ELTLKVGDIITNVKKMEEGWWEGTLNGKRGMFPDNFVKV 53

This subfamily is composed of the first SH3 domain (SH3A) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3A of both proteins bind to an atypical PXXXPR motif at the C-terminus of Cbl and the cytoplasmic domain of the cell adhesion protein CD2. CIN85 SH3A binds to internal proline-rich motifs within the proline-rich region; this intramolecular interaction serves as a regulatory mechanism to keep CIN85 in a closed conformation, preventing the recruitment of other proteins. CIN85 SH3A has also been shown to bind ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212757 cd11823, SH3_Nostrin, Src homology 3 domain of Nitric Oxide Synthase TRaffic INducer

 Score = 47.3 bits (113), Expect = 8e-08
 Identities = 19/38 (50%), Positives = 23/38 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           ELS + GDII V  + D  W+ GE N   G+FP  YVE
Sbjct: 15  ELSLQPGDIIEVHEKQDDGWWLGELNGKKGIFPATYVE 52

Nostrin is expressed in endothelial and epithelial cells and is involved in the regulation, trafficking and targeting of endothelial NOS (eNOS). It facilitates the endocytosis of eNOS by coordinating the functions of dynamin and the Wiskott-Aldrich syndrome protein (WASP). Increased expression of Nostrin may be correlated to preeclampsia. Nostrin contains an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212896 cd11963, SH3_STAM2, Src homology 3 domain of Signal Transducing Adaptor Molecule 2

 Score = 47.3 bits (112), Expect = 1e-07
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL+FK G+II V    D NW++GE++  +GLFP N+V
Sbjct: 17  ELTFKHGEIIIVLDDSDANWWKGENHRGVGLFPSNFV 53

STAM2, also called EAST (Epidermal growth factor receptor-associated protein with SH3 and TAM domain) or Hbp (Hrs binding protein), is part of the endosomal sorting complex required for transport (ESCRT-0). It plays a role in sorting mono-ubiquinated endosomal cargo for trafficking to the lysosome for degradation. It is also involved in the regulation of exocytosis. STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212855 cd11922, SH3_Sorbs1_2, Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin

 Score = 47.3 bits (112), Expect = 1e-07
 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEII 118
           D   E+SF+KG+ I + RQVD+NWYEG     +  G+FP  YV++I
Sbjct: 12  DTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVI 57

Sorbs1 is also called ponsin, SH3P12, or CAP (c-Cbl associated protein). It is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. It binds Cbl and plays a major role in regulating the insulin signaling pathway by enhancing insulin-induced phosphorylation of Cbl. Sorbs1, like vinexin, localizes at cell-ECM and cell-cell adhesion sites where it binds vinculin, paxillin, and afadin. It may function in the control of cell motility. Other interaction partners of Sorbs1 include c-Abl, Sos, flotillin, Grb4, ataxin-7, filamin C, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212979 cd12046, SH3_p67phox_C, C-terminal (or second) Src Homology 3 domain of the p67phox subunit of NADPH oxidase

 Score = 46.7 bits (111), Expect = 1e-07
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 61  YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
            +  L    + +  D    L F+KGD+I V  +V+++W EG+    IG+FP  +VE
Sbjct: 1   QVVALFSYEASQPED----LEFQKGDVILVLSKVNEDWLEGQCKGKIGIFPSAFVE 52

p67phox, also called Neutrophil cytosol factor 2 (NCF-2), is a cytosolic subunit of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) which plays a crucial role in the cellular response to bacterial infection. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p67phox plays a regulatory role and contains N-terminal TPR, first SH3 (or N-terminal or central SH3), PB1, and C-terminal SH3 domains. It binds, via its C-terminal SH3 domain, to a proline-rich region of p47phox and upon activation, this complex assembles with flavocytochrome b558, the Nox2-p22phox heterodimer. Concurrently, RacGTP translocates to the membrane and interacts with the TPR domain of p67phox, which leads to the activation of NADPH oxidase. The PB1 domain of p67phox binds to its partner PB1 domain in p40phox, and this facilitates the assembly of p47phox-p67phox at the membrane. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212884 cd11951, SH3_GRAP_C, C-terminal Src homology 3 domain of GRB2-related adaptor protein

 Score = 46.3 bits (110), Expect = 1e-07
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 4/55 (7%)

Query: 61  YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           ++Q  +D S+    ++ ++LSF++GDII V    D NW+ G  +  +G FP NYV
Sbjct: 1   FVQAQYDFSA----EDPSQLSFRRGDIIEVLDCPDPNWWRGRISGRVGFFPRNYV 51

GRAP is a GRB-2 like adaptor protein that is highly expressed in lymphoid tissues. It acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. It has been identified as a regulator of TGFbeta signaling in diabetic kidney tubules and may have a role in the pathogenesis of the disease. GRAP contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domains (SH3c) of the related proteins, GRB2 and GRAP2, have been shown to bind to classical PxxP motif ligands, as well as to non-classical motifs. GRB2 SH3c binds Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, while the SH3c of GRAP2 binds to the phosphatase-like protein HD-PTP via a RxxxxK motif. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212993 cd12060, SH3_alphaPIX, Src Homology 3 domain of alpha-Pak Interactive eXchange factor

 Score = 46.5 bits (110), Expect = 2e-07
 Identities = 21/41 (51%), Positives = 24/41 (58%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           N  ELS  KGDII+V R  +  W+EG  N   G FP NYV 
Sbjct: 14  NEDELSVCKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVR 54

Alpha-PIX, also called Rho guanine nucleotide exchange factor 6 (ARHGEF6) or Cool (Cloned out of Library)-2, activates small GTPases by exchanging bound GDP for free GTP. It acts as a GEF for both Cdc42 and Rac 1, and is localized in dendritic spines where it regulates spine morphogenesis. It controls dendritic length and spine density in the hippocampus. Mutations in the ARHGEF6 gene cause X-linked intellectual disability in humans. PIX proteins contain an N-terminal SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains, and a C-terminal leucine-zipper domain for dimerization. The SH3 domain of PIX binds to an atypical PxxxPR motif in p21-activated kinases (PAKs) with high affinity. The binding of PAKs to PIX facilitate the localization of PAKs to focal complexes and also localizes PAKs to PIX targets Cdc43 and Rac, leading to the activation of PAKs. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|213018 cd12142, SH3_D21-like, Src Homology 3 domain of SH3 domain-containing protein 21 (SH3D21) and similar proteins

 Score = 46.3 bits (110), Expect = 2e-07
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 79  ELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEI 117
           EL+ KKGD+I V  +   D+ W+EGE N   G FP N+V  
Sbjct: 15  ELALKKGDVIEVISKETEDEGWWEGELNGRRGFFPDNFVMP 55

N-terminal SH3 domain of the uncharacterized protein SH3 domain-containing protein 21, and similar uncharacterized domains, it belongs to the CD2AP-like_3 subfamily of proteins. The CD2AP-like_3 subfamily is composed of the third SH3 domain (SH3C) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3C of both proteins have been shown to bind to ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212775 cd11841, SH3_SH3YL1_like, Src homology 3 domain of SH3 domain containing Ysc84-like 1 (SH3YL1) protein

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 79  ELSFKKGDIIFVRRQVDK--NWYEGEHNAMIGLFPFNYV 115
           +LSF+ GD I V  + D   +W+EG     +G+FP NYV
Sbjct: 15  DLSFQAGDRITVLTRTDSQFDWWEGRLRGRVGIFPANYV 53

SH3YL1 localizes to the plasma membrane and is required for dorsal ruffle formation. It binds phosphoinositides (PIs) with high affinity through its N-terminal SYLF domain (also called DUF500). In addition, SH3YL1 contains a C-terminal SH3 domain which has been reported to bind to N-WASP, dynamin 2, and SHIP2 (a PI 5-phosphatase). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212865 cd11932, SH3_SH3RF2_2, Second Src Homology 3 domain of SH3 domain containing ring finger 2

 Score = 45.6 bits (108), Expect = 4e-07
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 67  DISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           D+  +   ++   L F+K DII V  +VD+NW EG+    +G+FP  +V
Sbjct: 9   DLKEKNREESKDCLKFQKDDIITVISRVDENWAEGKLGDQVGIFPILFV 57

SH3RF2 is also called POSHER (POSH-eliminating RING protein) or HEPP1 (heart protein phosphatase 1-binding protein). It acts as an anti-apoptotic regulator of the JNK pathway by binding to and promoting the degradation of SH3RF1 (or POSH), a scaffold protein that is required for pro-apoptotic JNK activation. It may also play a role in cardiac functions together with protein phosphatase 1. SH3RF2 contains an N-terminal RING finger domain and three SH3 domains. This model represents the second SH3 domain, located C-terminal of the first SH3 domain at the N-terminal half, of SH3RF2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212807 cd11874, SH3_CD2AP-like_2, Second Src Homology 3 domain (SH3B) of CD2-associated protein and similar proteins

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           EL  K GD I V  +V++ W+EG+ N  +G+FP N+V+ 
Sbjct: 15  ELELKVGDTIEVLGEVEEGWWEGKLNGKVGVFPSNFVKE 53

This subfamily is composed of the second SH3 domain (SH3B) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3B of both proteins have been shown to bind to Cbl. In the case of CD2AP, its SH3B binds to Cbl at a site distinct from the c-Cbl/SH3A binding site. The CIN85 SH3B also binds ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212706 cd11772, SH3_OSTF1, Src Homology 3 domain of metazoan osteoclast stimulating factor 1

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%)

Query: 72  RHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           +H D   ELSF++GD++++  + D NW++       GL P NYVE
Sbjct: 11  QHPD---ELSFEEGDLLYISDKSDPNWWKATCGGKTGLIPSNYVE 52

OSTF1, also named OSF or SH3P2, is a signaling protein containing SH3 and ankyrin-repeat domains. It acts through a Src-related pathway to enhance the formation of osteoclasts and bone resorption. It also acts as a negative regulator of cell motility. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212776 cd11842, SH3_Ysc84p_like, Src homology 3 domain of Ysc84p and similar fungal proteins

 Score = 45.1 bits (107), Expect = 4e-07
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)

Query: 79  ELSFKKGDIIFVRRQVDK--NWYEGEHNAMIGLFPFNYVEI 117
           +L+F+KGDII + ++ D   +W+ G      G+FP NYVE+
Sbjct: 15  DLAFQKGDIITILKKSDSQNDWWTGRIGGREGIFPANYVEL 55

This family is composed of the Saccharomyces cerevisiae proteins, Ysc84p (also called LAS17-binding protein 4, Lsb4p) and Lsb3p, and similar fungal proteins. They contain an N-terminal SYLF domain (also called DUF500) and a C-terminal SH3 domain. Ysc84p localizes to actin patches and plays an important in actin polymerization during endocytosis. The N-terminal domain of both Ysc84p and Lsb3p can bind and bundle actin filaments. A study of the yeast SH3 domain interactome predicts that the SH3 domains of Lsb3p and Lsb4p may function as molecular hubs for the assembly of endocytic complexes. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212893 cd11960, SH3_Abp1_eu, Src homology 3 domain of eumetazoan Actin-binding protein 1

 Score = 45.1 bits (107), Expect = 5e-07
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEI 117
           TE+SF  GDII    Q+D+ W+ G   +   GLFP NYVE+
Sbjct: 14  TEISFDPGDIITDIEQIDEGWWRGTGPDGTYGLFPANYVEL 54

Abp1, also called drebrin-like protein, is an adaptor protein that functions in receptor-mediated endocytosis and vesicle trafficking. It contains an N-terminal actin-binding module, the actin-depolymerizing factor (ADF) homology domain, a helical domain, and a C-terminal SH3 domain. Mammalian Abp1, unlike yeast Abp1, does not contain an acidic domain that interacts with the Arp2/3 complex. It regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. Abp1 deficiency causes abnormal organ structure and function of the spleen, heart, and lung of mice. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212803 cd11870, SH3_p67phox-like_C, C-terminal Src Homology 3 domain of the p67phox subunit of NADPH oxidase and similar proteins

 Score = 44.8 bits (106), Expect = 6e-07
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 65  LHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           LH   ++   D    L F++GD I V  +V++ W EG  +  +G+FP  +V 
Sbjct: 5   LHRYEAQGPED----LGFREGDTIDVLSEVNEAWLEGHSDGRVGIFPKCFVV 52

This subfamily is composed of p67phox, NADPH oxidase activator 1 (Noxa1), and similar proteins. p67phox, also called Neutrophil cytosol factor 2 (NCF-2), and Noxa1 are homologs and are the cytosolic subunits of the phagocytic (Nox2) and nonphagocytic (Nox1) NADPH oxidase complexes, respectively. NADPH oxidase catalyzes the transfer of electrons from NADPH to oxygen during phagocytosis forming superoxide and reactive oxygen species. p67phox and Noxa1 play regulatory roles. p67phox contains N-terminal TPR, first SH3 (or N-terminal or central SH3), PB1, and C-terminal SH3 domains. Noxa1 has a similar domain architecture except it is lacking the N-terminal SH3 domain. The TPR domain of both binds activated GTP-bound Rac, while the C-terminal SH3 domain of p67phox and Noxa1 binds the polyproline motif found at the C-terminus of p47phox and Noxo1, respectively. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212892 cd11959, SH3_Cortactin, Src homology 3 domain of Cortactin

 Score = 44.7 bits (106), Expect = 6e-07
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           E+SF   DII     +D+ W+ G      GLFP NYVE+
Sbjct: 15  EISFDPDDIITNIEMIDEGWWRGVCRGKYGLFPANYVEL 53

Cortactin was originally identified as a substrate of Src kinase. It is an actin regulatory protein that binds to the Arp2/3 complex and stabilizes branched actin filaments. It is involved in cellular processes that affect cell motility, adhesion, migration, endocytosis, and invasion. It is expressed ubiquitously except in hematopoietic cells, where the homolog hematopoietic lineage cell-specific 1 (HS1) is expressed instead. Cortactin contains an N-terminal acidic domain, several copies of a repeat domain found in cortactin and HS1, a proline-rich region, and a C-terminal SH3 domain. The N-terminal region interacts with the Arp2/3 complex and F-actin, and is crucial in regulating branched actin assembly. Cortactin also serves as a scaffold and provides a bridge to the actin cytoskeleton for membrane trafficking and signaling proteins that bind to its SH3 domain. Binding partners for the SH3 domain of cortactin include dynamin2, N-WASp, MIM, FGD1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212740 cd11806, SH3_PRMT2, Src homology 3 domain of Protein arginine N-methyltransferase 2

 Score = 44.3 bits (105), Expect = 8e-07
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 74  TDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           TD+ ++LSF+ GD + V R+   +W+  EHN   G  P +++
Sbjct: 11  TDD-SQLSFESGDKLLVLRKPSVDWWWAEHNGCCGYIPASHL 51

PRMT2, also called HRMT1L1, belongs to the arginine methyltransferase protein family. It functions as a coactivator to both estrogen receptor alpha (ER-alpha) and androgen receptor (AR), presumably through arginine methylation. The ER-alpha transcription factor is involved in cell proliferation, differentiation, morphogenesis, and apoptosis, and is also implicated in the development and progression of breast cancer. PRMT2 and its variants are upregulated in breast cancer cells and may be involved in modulating the ER-alpha signaling pathway during formation of breast cancer. PRMT2 also plays a role in regulating the function of E2F transcription factors, which are critical cell cycle regulators, by binding to the retinoblastoma gene product (RB). It contains an N-terminal SH3 domain and an AdoMet binding domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212894 cd11961, SH3_Abp1_fungi_C2, Second C-terminal Src homology 3 domain of Fungal Actin-binding protein 1

 Score = 44.1 bits (104), Expect = 1e-06
 Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           DN  ELSF + D I     VD +W+ GE +   GLFP NYVE
Sbjct: 13  DN--ELSFFENDKIINIEFVDDDWWLGECHGSRGLFPSNYVE 52

Abp1 is an adaptor protein that functions in receptor-mediated endocytosis and vesicle trafficking. It contains an N-terminal actin-binding module, the actin-depolymerizing factor (ADF) homology domain, a central proline-rich region, and a C-terminal SH3 domain (many yeast Abp1 proteins contain two C-terminal SH3 domains). Yeast Abp1 also contains two acidic domains that bind directly to the Arp2/3 complex, which is required to initiate actin polymerization. The SH3 domain of yeast Abp1 binds and localizes the kinases, Ark1p and Prk1p, which facilitate actin patch disassembly following vesicle internalization. It also mediates the localization to the actin patch of the synaptojanin-like protein, Sjl2p, which plays a key role in endocytosis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFP 111
           ELSFKKGDII V  + D  W++G       GL P
Sbjct: 13  ELSFKKGDIIIVLEKSDDGWWKGRLKGGKEGLIP 46

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|219499 pfam07653, SH3_2, Variant SH3 domain

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 19/40 (47%), Positives = 24/40 (60%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
            ELS KKGD++ V  + D  W+EGE     GL P +YVE 
Sbjct: 14  NELSLKKGDVVKVLDKDDNGWWEGERGGRRGLVPSSYVEE 53

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 53

>gnl|CDD|212749 cd11815, SH3_Eve1_2, Second Src homology 3 domain of ADAM-binding protein Eve-1

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 65  LHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           LHD  +    D    LS   G+I+++  ++D  WY G+     G+FP N+V+
Sbjct: 5   LHDFPAEHSDD----LSLNSGEIVYLLEKIDTEWYRGKCKNTTGIFPANHVK 52

Eve-1, also called SH3 domain-containing protein 19 (SH3D19) or EEN-binding protein (EBP), exists in multiple alternatively spliced isoforms. The longest isoform contains five SH3 domain in the C-terminal region and seven proline-rich motifs in the N-terminal region. It is abundantly expressed in skeletal muscle and heart, and may be involved in regulating the activity of ADAMs (A disintegrin and metalloproteases). Eve-1 interacts with EEN, an endophilin involved in endocytosis and may be the target of the MLL-EEN fusion protein that is implicated in leukemogenesis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212763 cd11829, SH3_GAS7, Src homology 3 domain of Growth Arrest Specific protein 7

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 62  LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
            + L+  +  +H      LSF+ G++I V +  D  W+EGE + + G FP +YV
Sbjct: 2   CRTLYAFTGEQHQQG---LSFEAGELIRVLQAPDGGWWEGEKDGLRGWFPASYV 52

GAS7 is mainly expressed in the brain and is required for neurite outgrowth. It may also play a role in the protection and migration of embryonic stem cells. Treatment-related acute myeloid leukemia (AML) has been reported resulting from mixed-lineage leukemia (MLL)-GAS7 translocations as a complication of primary cancer treatment. GAS7 contains an N-terminal SH3 domain, followed by a WW domain, and a central F-BAR domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212700 cd11766, SH3_Nck_2, Second Src Homology 3 domain of Nck adaptor proteins

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           ELS +KGD + V  +    W+ GE N  +G FP NYV 
Sbjct: 15  ELSLRKGDRVLVLEKSSDGWWRGECNGQVGWFPSNYVT 52

Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212857 cd11924, SH3_Vinexin_2, Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

 Score = 43.0 bits (101), Expect = 3e-06
 Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEI 117
           ELSF+KG+ I + R+V++NWYEG        G+FP +YV++
Sbjct: 16  ELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQV 56

Vinexin is also called Sorbs3, SH3P3, and SH3-containing adapter molecule 1 (SCAM-1). It is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. Vinexin was first identified as a vinculin binding protein; it is co-localized with vinculin at cell-ECM and cell-cell adhesion sites. There are several splice variants of vinexin: alpha, which contains the SoHo and three SH3 domains and displays tissue-specific expression; and beta, which contains only the three SH3 domains and is widely expressed. Vinexin alpha stimulates the accumulation of F-actin at focal contact sites. Vinexin also promotes keratinocyte migration and wound healing. The SH3 domains of vinexin have been reported to bind a number of ligands including vinculin, WAVE2, DLG5, Abl, and Cbl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212730 cd11796, SH3_DNMBP_N3, Third N-terminal Src homology 3 domain of Dynamin Binding Protein, also called Tuba

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL  ++GD++ +   +DK W+ GE N   G+FP  +V
Sbjct: 15  ELDLREGDVVTITGILDKGWFRGELNGRRGIFPEGFV 51

DNMBP or Tuba is a cdc42-specific guanine nucleotide exchange factor (GEF) that contains four N-terminal SH3 domains, a central RhoGEF [or Dbl homology (DH)] domain followed by a Bin/Amphiphysin/Rvs (BAR) domain, and two C-terminal SH3 domains. It provides a functional link between dynamin and key regulatory proteins of the actin cytoskeleton. It plays an important role in regulating cell junction configuration. The four N-terminal SH3 domains of DNMBP binds the GTPase dynamin, which plays an important role in the fission of endocytic vesicles. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212738 cd11804, SH3_GRB2_like_N, N-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins

 Score = 42.7 bits (101), Expect = 3e-06
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYV 115
           ELSFKKG I+ V   + D NWY+ E +   GL P NY+
Sbjct: 15  ELSFKKGSILKVLNMEDDPNWYKAELDGKEGLIPKNYI 52

This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The N-terminal SH3 domain of GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212817 cd11884, SH3_MYO15, Src Homology 3 domain of Myosin XV

 Score = 42.7 bits (101), Expect = 4e-06
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 74  TDNFTELSFKKGDIIFV---RRQVDKNWYEGEHNAMIGLFPFNYVE 116
           T + T LSF KGD+I +      +D  W  G  +   G FP  YV+
Sbjct: 10  TRDQTLLSFHKGDVIKLLPKEGPLDPGWLFGTLDGRSGAFPKEYVQ 55

This subfamily is composed of proteins with similarity to Myosin XVa. Myosin XVa is an unconventional myosin that is critical for the normal growth of mechanosensory stereocilia of inner ear hair cells. Mutations in the myosin XVa gene are associated with nonsyndromic hearing loss. Myosin XVa contains a unique N-terminal extension followed by a motor domain, light chain-binding IQ motifs, and a tail consisting of a pair of MyTH4-FERM tandems separated by a SH3 domain, and a PDZ domain. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 56

>gnl|CDD|212990 cd12057, SH3_CIN85_3, Third Src Homology 3 domain (SH3C) of Cbl-interacting protein of 85 kDa

 Score = 42.2 bits (99), Expect = 5e-06
 Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)

Query: 76  NFTELSFKKGDIIFV--RRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           N  EL+ K+GDI+ +  +  +D  W+EGE N   G+FP N+V+++
Sbjct: 12  NEDELTIKEGDIVTLISKDCIDAGWWEGELNGRRGVFPDNFVKLL 56

CIN85, also called SH3 domain-containing kinase-binding protein 1 (SH3KBP1) or CD2-binding protein 3 (CD2BP3) or Ruk, is an adaptor protein that is involved in the downregulation of receptor tyrosine kinases by facilitating endocytosis through interaction with endophilin-associated ubiquitin ligase Cbl proteins. It is also important in many other cellular processes including vesicle-mediated transport, cytoskeletal remodelling, apoptosis, cell adhesion and migration, and viral infection, among others. CIN85 exists as multiple variants from alternative splicing; the main variant contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the third SH3 domain (SH3C) of CIN85. SH3C has been shown to bind ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212773 cd11839, SH3_Intersectin_4, Fourth Src homology 3 domain (or SH3D) of Intersectin

 Score = 42.3 bits (100), Expect = 5e-06
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE-----HNAMIGLFPFNYVEI 117
           +LS   G ++ VR++    W+EGE         IG FP NYV++
Sbjct: 15  QLSLAVGQLVLVRKKSPSGWWEGELQARGKKRQIGWFPANYVKL 58

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The fourth SH3 domain (or SH3D) of ITSN1 has been shown to bind SHIP2, Numb, CdGAP, and N-WASP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212752 cd11818, SH3_Eve1_5, Fifth Src homology 3 domain of ADAM-binding protein Eve-1

 Score = 42.1 bits (99), Expect = 6e-06
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query: 73  HTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNY 114
             +N  ELSFK GDII     +D+ W  GE     G+FP N+
Sbjct: 9   TGENEDELSFKAGDIITELESIDEEWMSGELRGKSGIFPKNF 50

Eve-1, also called SH3 domain-containing protein 19 (SH3D19) or EEN-binding protein (EBP), exists in multiple alternatively spliced isoforms. The longest isoform contains five SH3 domain in the C-terminal region and seven proline-rich motifs in the N-terminal region. It is abundantly expressed in skeletal muscle and heart, and may be involved in regulating the activity of ADAMs (A disintegrin and metalloproteases). Eve-1 interacts with EEN, an endophilin involved in endocytosis and may be the target of the MLL-EEN fusion protein that is implicated in leukemogenesis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 50

>gnl|CDD|212751 cd11817, SH3_Eve1_4, Fourth Src homology 3 domain of ADAM-binding protein Eve-1

 Score = 42.1 bits (99), Expect = 6e-06
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 65  LHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNY 114
           L+D +     D    LSF++GD I V   +D  W  G  N   G+FP  +
Sbjct: 5   LYDFTGETEED----LSFQRGDRILVTEHLDAEWSRGRLNGREGIFPRAF 50

Eve-1, also called SH3 domain-containing protein 19 (SH3D19) or EEN-binding protein (EBP), exists in multiple alternatively spliced isoforms. The longest isoform contains five SH3 domain in the C-terminal region and seven proline-rich motifs in the N-terminal region. It is abundantly expressed in skeletal muscle and heart, and may be involved in regulating the activity of ADAMs (A disintegrin and metalloproteases). Eve-1 interacts with EEN, an endophilin involved in endocytosis and may be the target of the MLL-EEN fusion protein that is implicated in leukemogenesis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 50

>gnl|CDD|212750 cd11816, SH3_Eve1_3, Third Src homology 3 domain of ADAM-binding protein Eve-1

 Score = 41.6 bits (98), Expect = 8e-06
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           +   ELSF +GD+I ++  V + W +GE N  IG+FP N+V
Sbjct: 11  EQEDELSFSEGDVITLKEYVGEEWAKGELNGKIGIFPLNFV 51

Eve-1, also called SH3 domain-containing protein 19 (SH3D19) or EEN-binding protein (EBP), exists in multiple alternatively spliced isoforms. The longest isoform contains five SH3 domain in the C-terminal region and seven proline-rich motifs in the N-terminal region. It is abundantly expressed in skeletal muscle and heart, and may be involved in regulating the activity of ADAMs (A disintegrin and metalloproteases). Eve-1 interacts with EEN, an endophilin involved in endocytosis and may be the target of the MLL-EEN fusion protein that is implicated in leukemogenesis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|213006 cd12073, SH3_HS1, Src homology 3 domain of Hematopoietic lineage cell-specific protein 1

 Score = 41.7 bits (98), Expect = 8e-06
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           E+SF   + I     VD+ W++G  +   GLFP NYVE+
Sbjct: 16  EISFDPQETITDIEMVDEGWWKGTCHGHRGLFPANYVEL 54

HS1, also called HCLS1 (hematopoietic cell-specific Lyn substrate 1), is a cortactin homolog expressed specifically in hematopoietic cells. It is an actin regulatory protein that binds the Arp2/3 complex and stabilizes branched actin filaments. It is required for cell spreading and signaling in lymphocytes. It regulates cytoskeletal remodeling that controls lymphocyte trafficking, and it also affects tissue invasion and infiltration of leukemic B cells. Like cortactin, HS1 contains an N-terminal acidic domain, several copies of a repeat domain found in cortactin and HS1, a proline-rich region, and a C-terminal SH3 domain. The N-terminal region binds the Arp2/3 complex and F-actin, while the C-terminal region acts as an adaptor or scaffold that can connect varied proteins that bind the SH3 domain within the actin network. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212863 cd11930, SH3_SH3RF1_2, Second Src Homology 3 domain of SH3 domain containing ring finger protein 1, an E3 ubiquitin-protein ligase

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 80  LSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           L F K DI+ V R+VD+NW EG     IG+FP +YV
Sbjct: 20  LPFAKDDILTVIRRVDENWAEGMLGDKIGIFPISYV 55

SH3RF1 is also called POSH (Plenty of SH3s) or SH3MD2 (SH3 multiple domains protein 2). It is a scaffold protein that acts as an E3 ubiquitin-protein ligase. It plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF1 also enhances the ubiquitination of ROMK1 potassium channel resulting in its increased endocytosis. It contains an N-terminal RING finger domain and four SH3 domains. This model represents the second SH3 domain, located C-terminal of the first SH3 domain at the N-terminal half, of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212696 cd11762, SH3_FCHSD_2, Second Src Homology 3 domain of FCH and double SH3 domains proteins

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 4/43 (9%)

Query: 79  ELSFKKGDIIFVRRQ----VDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSF +G II + R+    VD  W+EGE N  +G+FP   VE 
Sbjct: 15  ELSFPEGAIIRILRKDDNGVDDGWWEGEFNGRVGVFPSLVVEE 57

This group is composed of FCH and double SH3 domains protein 1 (FCHSD1) and FCHSD2. These proteins have a common domain structure consisting of an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), two SH3, and C-terminal proline-rich domains. They have only been characterized in silico and their functions remain unknown. This group also includes the insect protein, nervous wreck, which acts as a regulator of synaptic growth signaling. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212703 cd11769, SH3_CSK, Src Homology 3 domain of C-terminal Src kinase

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 79  ELSFKKGDIIF-VRRQVDKNWYEGEHNA-MIGLFPFNYVEI 117
           +L FKKGDI+  V    D NWY+ ++     G+ P NYV+ 
Sbjct: 17  DLPFKKGDILTIVAVTKDPNWYKAKNKDGREGMIPANYVQK 57

CSK is a cytoplasmic (or nonreceptor) tyr kinase containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, CSK is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. CSK catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. It is expressed in a wide variety of tissues and plays a role, as a regulator of Src, in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, CSK also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212764 cd11830, SH3_VAV_2, C-terminal (or second) Src homology 3 domain of VAV proteins

 Score = 41.1 bits (96), Expect = 1e-05
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVE 116
           ELS K+GD++ +  ++  + W+ GE N  IG FP  YVE
Sbjct: 15  ELSLKEGDVVKIYNKKGQQGWWRGEINGRIGWFPSTYVE 53

VAV proteins function both as cytoplasmic guanine nucleotide exchange factors (GEFs) for Rho GTPases and scaffold proteins and they play important roles in cell signaling by coupling cell surface receptors to various effector functions. They play key roles in processes that require cytoskeletal reorganization including immune synapse formation, phagocytosis, cell spreading, and platelet aggregation, among others. Vertebrates have three VAV proteins (VAV1, VAV2, and VAV3). VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212879 cd11946, SH3_GRB2_N, N-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 41.2 bits (96), Expect = 1e-05
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSFK+GDI+ V   + D+NWY+ E N   G  P NY+E+
Sbjct: 16  ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEM 55

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. Its N-terminal SH3 domain binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212888 cd11955, SH3_srGAP1-3, Src homology 3 domain of Slit-Robo GTPase Activating Proteins 1, 2, and 3

 Score = 41.1 bits (96), Expect = 1e-05
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSFKKG  + +  +   +W+EG HN + GL P  Y+ +
Sbjct: 15  ELSFKKGASLLLYHRASDDWWEGRHNGIDGLVPHQYIVV 53

srGAP1, also called Rho GTPase-Activating Protein 13 (ARHGAP13), is a Cdc42- and RhoA-specific GAP and is expressed later in the development of central nervous system tissues. srGAP2 is expressed in zones of neuronal differentiation. It plays a role in the regeneration of neurons and axons. srGAP3, also called MEGAP (MEntal disorder associated GTPase-Activating Protein), is a Rho GAP with activity towards Rac1 and Cdc42. It impacts cell migration by regulating actin and microtubule cytoskeletal dynamics. The association between srGAP3 haploinsufficiency and mental retardation is under debate. srGAPs are Rho GAPs that interact with Robo1, the transmembrane receptor of Slit proteins. Slit proteins are secreted proteins that control axon guidance and the migration of neurons and leukocytes. srGAPs contain an N-terminal F-BAR domain, a Rho GAP domain, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212883 cd11950, SH3_GRAP2_C, C-terminal Src homology 3 domain of GRB2-related adaptor protein 2

 Score = 41.0 bits (96), Expect = 2e-05
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           EL F  GD+I V    + +W++G  +  +GLFP NYV 
Sbjct: 15  ELGFNSGDVIEVLDSSNPSWWKGRLHGKLGLFPANYVA 52

GRAP2 is also called GADS (GRB2-related adapter downstream of Shc), GrpL, GRB2L, Mona, or GRID (Grb2-related protein with insert domain). It is expressed specifically in the hematopoietic system. It plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. It also has roles in antigen-receptor and tyrosine kinase mediated signaling. GRAP2 is unique from other GRB2-like adaptor proteins in that it can be regulated by caspase cleavage. It contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRAP2 binds to different motifs found in substrate peptides including the typical PxxP motif in hematopoietic progenitor kinase 1 (HPK1), the RxxK motif in SLP-76 and HPK1, and the RxxxxK motif in phosphatase-like protein HD-PTP. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212785 cd11851, SH3_RIM-BP, Src homology 3 domains of Rab3-interacting molecules (RIMs) binding proteins

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 78  TELSFKKGDIIFVRRQVDKN-WYEGEHNA-MIGLFPFNYVE 116
            ELSF  GD++ V   +D++ +Y GE      GL P N+V+
Sbjct: 21  EELSFHAGDVVRVYGPMDEDGFYYGELEGGRKGLVPSNFVQ 61

RIMs binding proteins (RBPs, RIM-BPs) associate with calcium channels present in photoreceptors, neurons, and hair cells; they interact simultaneously with specific calcium channel subunits, and active zone proteins, RIM1 and RIM2. RIMs are part of the matrix at the presynaptic active zone and are associated with synaptic vesicles through their interaction with the small GTPase Rab3. RIM-BPs play a role in regulating synaptic transmission by serving as adaptors and linking calcium channels with the synaptic vesicle release machinery. RIM-BPs contain three SH3 domains and two to three fibronectin III repeats. Invertebrates contain one, while vertebrates contain at least two RIM-BPs, RIM-BP1 and RIM-BP2. RIM-BP1 is also called peripheral-type benzodiazapine receptor associated protein 1 (PRAX-1). Mammals contain a third protein, RIM-BP3. RIM-BP1 and RIM-BP2 are predominantly expressed in the brain where they display overlapping but distinct expression patterns, while RIM-BP3 is almost exclusively expressed in the testis and is essential in spermiogenesis. The SH3 domains of RIM-BPs bind to the PxxP motifs of RIM1, RIM2, and L-type (alpha1D) and N-type (alpha1B) calcium channel subunits. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|212758 cd11824, SH3_PSTPIP1, Src homology 3 domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
            ELS  KGD++ V  + +  W+  E N   GL P  Y+E 
Sbjct: 14  DELSISKGDVVAVIEKGEDGWWTVERNGQKGLVPGTYLEK 53

PSTPIP1, also called CD2 Binding Protein 1 (CD2BP1), is mainly expressed in hematopoietic cells. It is a binding partner of the cell surface receptor CD2 and PTP-PEST, a tyrosine phosphatase which functions in cell motility and Rac1 regulation. It also plays a role in the activation of the Wiskott-Aldrich syndrome protein (WASP), which couples actin rearrangement and T cell activation. Mutations in the gene encoding PSTPIP1 cause the autoinflammatory disorder known as PAPA (pyogenic sterile arthritis, pyoderma gangrenosum, and acne) syndrome. PSTPIP1 contains an N-terminal F-BAR domain, PEST motifs, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212744 cd11810, SH3_RUSC1_like, Src homology 3 domain of RUN and SH3 domain-containing proteins 1 and 2

 Score = 40.5 bits (95), Expect = 2e-05
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNY 114
           +LSF+KGDI+ V  +VD +W      +  GL P +Y
Sbjct: 15  QLSFRKGDILRVIARVDDDWLLCTRGSTKGLVPLSY 50

RUSC1 and RUSC2, that were originally characterized in silico. They are adaptor proteins consisting of RUN, leucine zipper, and SH3 domains. RUSC1, also called NESCA (New molecule containing SH3 at the carboxy-terminus), is highly expressed in the brain and is translocated to the nuclear membrane from the cytoplasm upon stimulation with neurotrophin. It plays a role in facilitating neurotrophin-dependent neurite outgrowth. It also interacts with NEMO (or IKKgamma) and may function in NEMO-mediated activation of NF-kB. RUSC2, also called Iporin, is expressed ubiquitously with highest amounts in the brain and testis. It interacts with the small GTPase Rab1 and the Golgi matrix protein GM130, and may function in linking GTPases to certain intracellular signaling pathways. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 50

>gnl|CDD|212755 cd11821, SH3_ASAP, Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing proteins

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGE-----HNAMIGLFPFNY 114
           DN  EL+F +G+II V  + D  W+EG           G+FP ++
Sbjct: 11  DNDDELTFSEGEIIVVTGEEDDEWWEGHIEGDPSRR--GVFPVSF 53

ASAPs are Arf GTPase activating proteins (GAPs) and they function in regulating cell growth, migration, and invasion. They contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, ankyrin (ANK) repeats, and a C-terminal SH3 domain. Vertebrates contain at least three members, ASAP1, ASAP2, and ASAP3, but some ASAP3 proteins do not seem to harbor a C-terminal SH3 domain. ASAP1 and ASAP2 show GTPase activating protein (GAP) activity towards Arf1 and Arf5. They do not show GAP activity towards Arf6, but are able to mediate Arf6 signaling by binding stably to GTP-Arf6. ASAP3 is an Arf6-specific GAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212822 cd11889, SH3_Cyk3p-like, Src Homology 3 domain of Cytokinesis protein 3 and similar proteins

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYV 115
           +L F +GD+I V    D +W+ G+   N   G+FP N+V
Sbjct: 15  DLGFLEGDLIEVLSIGDGSWWSGKLRRNGAEGIFPSNFV 53

Cytokinesis protein 3 (Cyk3 or Cyk3p) is a component of the actomyosin ring independent cytokinesis pathway in yeast. It interacts with Inn1 and facilitates its recruitment to the bud neck, thereby promoting cytokinesis. Cyk3p contains an N-terminal SH3 domain and a C-terminal transglutaminase-like domain. The Cyk3p SH3 domain binds to the C-terminal proline-rich region of Inn1. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 53

>gnl|CDD|212761 cd11827, SH3_MyoIe_If_like, Src homology 3 domain of Myosins Ie, If, and similar proteins

 Score = 39.7 bits (93), Expect = 4e-05
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           ELSF +GDII + ++    W+ G      GLFP NYVE
Sbjct: 15  ELSFNEGDIIEILKEDPSGWWTGRLRGKEGLFPGNYVE 52

Myosins Ie (MyoIe) and If (MyoIf) are nonmuscle, unconventional, long tailed, class I myosins containing an N-terminal motor domain and a myosin tail with TH1, TH2, and SH3 domains. MyoIe interacts with the endocytic proteins, dynamin and synaptojanin-1, through its SH3 domain; it may play a role in clathrin-dependent endocytosis. In the kidney, MyoIe is critical for podocyte function and normal glomerular filtration. Mutations in MyoIe is associated with focal segmental glomerulosclerosis, a disease characterized by massive proteinuria and progression to end-stage kidney disease. MyoIf is predominantly expressed in the immune system; it plays a role in immune cell motility and innate immunity. Mutations in MyoIf may be associated with the loss of hearing. The MyoIf gene has also been found to be fused to the MLL (Mixed lineage leukemia) gene in infant acute myeloid leukemias (AML). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212815 cd11882, SH3_GRAF-like, Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase and similar proteins

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 78  TELSFKKGDIIF-VRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           +ELSF+ G II  V+   +  W EG  N   GL P NYVE 
Sbjct: 14  SELSFEPGQIITNVQPSDEPGWLEGTLNGRTGLIPENYVEF 54

This subfamily is composed of Rho GTPase activating proteins (GAPs) with similarity to GRAF. Members contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. Although vertebrates harbor four Rho GAPs in the GRAF subfamily including GRAF, GRAF2, GRAF3, and Oligophrenin-1 (OPHN1), only three are included in this model. OPHN1 contains the BAR, PH and GAP domains, but not the C-terminal SH3 domain. GRAF and GRAF2 show GAP activity towards RhoA and Cdc42. GRAF influences Rho-mediated cytoskeletal rearrangements and binds focal adhesion kinase. GRAF2 regulates caspase-activated p21-activated protein kinase-2. The SH3 domain of GRAF and GRAF2 binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|212910 cd11977, SH3_VAV2_2, C-terminal (or second) Src homology 3 domain of VAV2 protein

 Score = 39.6 bits (92), Expect = 5e-05
 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)

Query: 79  ELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVE 116
           ELS ++GD++ +  ++  D+ W++GE N  IG FP  YVE
Sbjct: 16  ELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVE 55

VAV2 is widely expressed and functions as a guanine nucleotide exchange factor (GEF) for RhoA, RhoB and RhoG and also activates Rac1 and Cdc42. It is implicated in many cellular and physiological functions including blood pressure control, eye development, neurite outgrowth and branching, EGFR endocytosis and degradation, and cell cluster morphology, among others. It has been reported to associate with Nek3. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212864 cd11931, SH3_SH3RF3_2, Second Src Homology 3 domain of SH3 domain containing ring finger 3, an E3 ubiquitin-protein ligase

 Score = 39.5 bits (92), Expect = 5e-05
 Identities = 20/53 (37%), Positives = 30/53 (56%)

Query: 63  QELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           + L+D   +    +   L+F K +I+ V R+VD+NW EG     IG+FP  YV
Sbjct: 3   KALYDFEIKDKDQDKDCLTFTKDEILTVIRRVDENWAEGMLGDKIGIFPILYV 55

SH3RF3 is also called POSH2 (Plenty of SH3s 2) or SH3MD4 (SH3 multiple domains protein 4). It is a scaffold protein with E3 ubiquitin-protein ligase activity. It was identified in the screen for interacting partners of p21-activated kinase 2 (PAK2). It may play a role in regulating JNK mediated apoptosis in certain conditions. It also interacts with GTP-loaded Rac1. SH3RF3 is highly homologous to SH3RF1; it also contains an N-terminal RING finger domain and four SH3 domains. This model represents the second SH3 domain, located C-terminal of the first SH3 domain at the N-terminal half, of SH3RF3. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212980 cd12047, SH3_Noxa1_C, C-terminal Src Homology 3 domain of NADPH oxidase activator 1

 Score = 39.4 bits (92), Expect = 5e-05
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 65  LHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFP 111
            HD S++   D    L F +GD I +  +V++ W EG  +  IG+FP
Sbjct: 5   QHDYSAQGPED----LEFSQGDTIDILSEVNQEWLEGHCDGRIGIFP 47

Noxa1 is a homolog of p67phox and is a cytosolic subunit of the nonphagocytic NADPH oxidase complex Nox1, which catalyzes the transfer of electrons from NADPH to molecular oxygen to form superoxide. Noxa1 is co-expressed with Nox1 in colon, stomach, uterus, prostate, and vascular smooth muscle cells, consistent with its regulatory role. It does not interact with p40phox, unlike p67phox, making Nox1 activity independent of p40phox, unlike Nox2. Noxa1 contains TPR, PB1, and C-terminal SH3 domains, but lacks the central SH3 domain that is present in p67phox. The TPR domain binds activated GTP-bound Rac. The C-terminal SH3 domain binds the polyproline motif found at the C-terminus of Noxo1, a homolog of p47phox. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212987 cd12054, SH3_CD2AP_2, Second Src Homology 3 domain (SH3B) of CD2-associated protein

 Score = 39.6 bits (92), Expect = 6e-05
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           N  EL  K GDII +  +V++ W+ G  N   GLFP N+V+
Sbjct: 13  NEDELELKVGDIIDINEEVEEGWWSGTLNGKSGLFPSNFVK 53

CD2AP, also called CMS (Cas ligand with Multiple SH3 domains) or METS1 (Mesenchyme-to-Epithelium Transition protein with SH3 domains), is a cytosolic adaptor protein that plays a role in regulating the cytoskeleton. It is critical in cell-to-cell union necessary for kidney function. It also stabilizes the contact between a T cell and antigen-presenting cells. It is primarily expressed in podocytes at the cytoplasmic face of the slit diaphragm and serves as a linker anchoring podocin and nephrin to the actin cytoskeleton. CD2AP contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the second SH3 domain (SH3B) of CD2AP. SH3B binds to c-Cbl in a site (TPSSRPLR is the core binding motif) distinct from the c-Cbl/SH3A binding site. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212719 cd11785, SH3_SH3RF_C, C-terminal (Fourth) Src Homology 3 domain of SH3 domain containing ring finger 1 (SH3RF1), SH3RF3, and similar domains

 Score = 39.4 bits (92), Expect = 6e-05
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVE 116
           EL  K+GDI+FV ++ +  W++G        GLFP ++VE
Sbjct: 15  ELELKEGDIVFVHKKREDGWFKGTLQRTGKTGLFPGSFVE 54

SH3RF1 (or POSH) and SH3RF3 (or POSH2) are scaffold proteins that function as E3 ubiquitin-protein ligases. They contain an N-terminal RING finger domain and four SH3 domains. This model represents the fourth SH3 domain, located at the C-terminus of SH3RF1 and SH3RF3, and similar domains. SH3RF1 plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF3 interacts with p21-activated kinase 2 (PAK2) and GTP-loaded Rac1. It may play a role in regulating JNK mediated apoptosis in certain conditions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212988 cd12055, SH3_CIN85_2, Second Src Homology 3 domain (SH3B) of Cbl-interacting protein of 85 kDa

 Score = 39.2 bits (91), Expect = 6e-05
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           N  EL  K GDII V  +V++ W+EG  N   G+FP N+++
Sbjct: 12  NEDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIK 52

CIN85, also called SH3 domain-containing kinase-binding protein 1 (SH3KBP1) or CD2-binding protein 3 (CD2BP3) or Ruk, is an adaptor protein that is involved in the downregulation of receptor tyrosine kinases by facilitating endocytosis through interaction with endophilin-associated ubiquitin ligase Cbl proteins. It is also important in many other cellular processes including vesicle-mediated transport, cytoskeletal remodelling, apoptosis, cell adhesion and migration, and viral infection, among others. CIN85 exists as multiple variants from alternative splicing; the main variant contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the second SH3 domain (SH3B) of CIN85. SH3B has been shown to bind Cbl proline-rich peptides and ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212771 cd11837, SH3_Intersectin_2, Second Src homology 3 domain (or SH3B) of Intersectin

 Score = 39.3 bits (92), Expect = 7e-05
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEI 117
            LSF KGDII V  Q +  W+ GE      G FP +YV+ 
Sbjct: 15  HLSFAKGDIITVLEQQE-MWWFGELEGGEEGWFPKSYVKE 53

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The second SH3 domain (or SH3B) of ITSN1 has been shown to bind WNK and CdGAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212909 cd11976, SH3_VAV1_2, C-terminal (or second) Src homology 3 domain of VAV1 protein

 Score = 39.2 bits (91), Expect = 7e-05
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 78  TELSFKKGDII-FVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           +ELS K+GDII  + ++  + W+ GE    +G FP NYVE
Sbjct: 14  SELSLKEGDIIKILNKKGQQGWWRGEIYGRVGWFPANYVE 53

VAV1 is expressed predominantly in the hematopoietic system and it plays an important role in the development and activation of B and T cells. It is activated by tyrosine phosphorylation to function as a guanine nucleotide exchange factor (GEF) for Rho GTPases following cell surface receptor activation, triggering various effects such as cytoskeletal reorganization, transcription regulation, cell cycle progression, and calcium mobilization. It also serves as a scaffold protein and has been shown to interact with Ku70, Socs1, Janus kinase 2, SIAH2, S100B, Abl gene, ZAP-70, SLP76, and Syk, among others. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The C-terminal SH3 domain of Vav1 interacts with a wide variety of proteins including cytoskeletal regulators (zyxin), RNA-binding proteins (Sam68), transcriptional regulators, viral proteins, and dynamin 2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212772 cd11838, SH3_Intersectin_3, Third Src homology 3 domain (or SH3C) of Intersectin

 Score = 38.9 bits (91), Expect = 9e-05
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           +L+F  GD+I V ++ D  W+ G      G+FP NYV
Sbjct: 15  DLTFNAGDVILVTKK-DGEWWTGTIGDRTGIFPSNYV 50

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The third SH3 domain (or SH3C) of ITSN1 has been shown to bind many proteins including dynamin1/2, CIN85, c-Cbl, SHIP2, Reps1, synaptojanin-1, and WNK, among others. The SH3C of ITSN2 has been shown to bind the K15 protein of Kaposi's sarcoma-associated herpesvirus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212977 cd12044, SH3_SKAP1, Src Homology 3 domain of Src Kinase-Associated Phosphoprotein 1

 Score = 38.7 bits (90), Expect = 9e-05
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)

Query: 61  YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDK--NWYEGEHNAMIGLFPFNYV 115
           Y Q L D       DN  ELSF++GD+I++  +      W+ GE N ++G+ P +Y+
Sbjct: 1   YYQGLWDC----FGDNPDELSFQRGDLIYILSKEYNMYGWWVGELNGIVGIVPKDYL 53

SKAP1, also called SKAP55 (Src kinase-associated protein of 55kDa), is an immune cell-specific adaptor protein that plays an important role in T-cell adhesion, migration, and integrin clustering. It is expressed exclusively in T-lymphocytes, mast cells, and macrophages. Binding partners include ADAP (adhesion and degranulation-promoting adaptor protein), Fyn, Riam, RapL, and RasGRP. It contains a pleckstrin homology (PH) domain, a C-terminal SH3 domain, and several tyrosine phosphorylation sites. The SH3 domain of SKAP1 is necessary for its ability to regulate T-cell conjugation with antigen-presenting cells and the formation of LFA-1 clusters. SKAP1 binds primarily to a proline-rich region of ADAP through its SH3 domain; its degradation is regulated by ADAP. A secondary interaction occurs via the ADAP SH3 domain and the RKxxYxxY motif in SKAP1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212989 cd12056, SH3_CD2AP_3, Third Src Homology 3 domain (SH3C) of CD2-associated protein

 Score = 39.0 bits (91), Expect = 9e-05
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 76  NFTELSFKKGDIIFV--RRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           N  EL FK+G+II +  +   +  W++GE N   G+FP N+V  
Sbjct: 14  NEDELDFKEGEIILIISKDTGEPGWWKGELNGKEGVFPDNFVSQ 57

CD2AP, also called CMS (Cas ligand with Multiple SH3 domains) or METS1 (Mesenchyme-to-Epithelium Transition protein with SH3 domains), is a cytosolic adaptor protein that plays a role in regulating the cytoskeleton. It is critical in cell-to-cell union necessary for kidney function. It also stabilizes the contact between a T cell and antigen-presenting cells. It is primarily expressed in podocytes at the cytoplasmic face of the slit diaphragm and serves as a linker anchoring podocin and nephrin to the actin cytoskeleton. CD2AP contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the third SH3 domain (SH3C) of CD2AP. SH3C has been shown to bind ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212723 cd11789, SH3_Nebulin_family_C, C-terminal Src Homology 3 domain of the Nebulin family of proteins

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEG--EHNAMIGLFPFNYVE 116
           E+SF++GD+I     +D  W EG  +     G+ P NYVE
Sbjct: 15  EVSFQEGDVIINVEIIDDGWMEGTVQRTGQSGMLPANYVE 54

Nebulin family proteins contain multiple nebulin repeats, and may contain an N-terminal LIM domain and/or a C-terminal SH3 domain. They have molecular weights ranging from 34 to 900 kD, depending on the number of nebulin repeats, and they all bind actin. They are involved in the regulation of actin filament architecture and function as stabilizers and scaffolds for cytoskeletal structures with which they associate, such as long actin filaments or focal adhesions. Nebulin family proteins that contain a C-terminal SH3 domain include the giant filamentous protein nebulin, nebulette, Lasp1, and Lasp2. Lasp2, also called LIM-nebulette, is an alternatively spliced variant of nebulette. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212697 cd11763, SH3_SNX9_like, Src Homology 3 domain of Sorting Nexin 9 and similar proteins

 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 73  HTDNFTELSFKKGDIIFVRRQ-VDKNWYEGEH-NAMIGLFPFNYVEI 117
            +    ELS + G+++ + RQ V   W EG +    +GLFP +YVEI
Sbjct: 9   DSQPSGELSLRAGEVLTITRQDVGDGWLEGRNSRGEVGLFPSSYVEI 55

Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. This subfamily consists of SH3 domain containing SNXs including SNX9, SNX18, SNX33, and similar proteins. SNX9 is localized to plasma membrane endocytic sites and acts primarily in clathrin-mediated endocytosis, while SNX18 is localized to peripheral endosomal structures, and acts in a trafficking pathway that is clathrin-independent but relies on AP-1 and PACS1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212747 cd11813, SH3_SGSM3, Src Homology 3 domain of Small G protein Signaling Modulator 3

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 72  RHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           RH D+  EL F+K DII +  Q D++ + GE N + G FP  +VE+
Sbjct: 10  RHDDD--ELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVEL 53

SGSM3 is also called Merlin-associated protein (MAP), RUN and SH3 domain-containing protein (RUSC3), RUN and TBC1 domain-containing protein 3 (RUTBC3), Rab GTPase-activating protein 5 (RabGAP5), or Rab GAP-like protein (RabGAPLP). It is expressed ubiquitously and functions as a regulator of small G protein RAP- and RAB-mediated neuronal signaling. It is involved in modulating NGF-mediated neurite outgrowth and differentiation. It also interacts with the tumor suppressor merlin and may play a role in the merlin-associated suppression of cell growth. SGSM3 contains TBC, SH3, and RUN domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212770 cd11836, SH3_Intersectin_1, First Src homology 3 domain (or SH3A) of Intersectin

 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 76  NFTELSFKKGDIIFV--RRQVDKNWYEGEHNAMIGLFPFNYVE 116
           N  E+SF+ GDII V   +  +  W  GE     G FP NYVE
Sbjct: 12  NPDEISFQPGDIIQVDESQVAEPGWLAGELKGKTGWFPANYVE 54

Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The first SH3 domain (or SH3A) of ITSN1 has been shown to bind many proteins including Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212946 cd12013, SH3_RIM-BP_3, Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins

 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVE 116
           ELSF+ GDII V  ++D++ +Y GE N   GL P N++E
Sbjct: 22  ELSFRAGDIITVFGEMDEDGFYYGELNGQRGLVPSNFLE 60

RIMs binding proteins (RBPs, RIM-BPs) associate with calcium channels present in photoreceptors, neurons, and hair cells; they interact simultaneously with specific calcium channel subunits, and active zone proteins, RIM1 and RIM2. RIMs are part of the matrix at the presynaptic active zone and are associated with synaptic vesicles through their interaction with the small GTPase Rab3. RIM-BPs play a role in regulating synaptic transmission by serving as adaptors and linking calcium channels with the synaptic vesicle release machinery. RIM-BPs contain three SH3 domains and two to three fibronectin III repeats. Invertebrates contain one, while vertebrates contain at least two RIM-BPs, RIM-BP1 and RIM-BP2. RIM-BP1 is also called peripheral-type benzodiazapine receptor associated protein 1 (PRAX-1). Mammals contain a third protein, RIM-BP3. RIM-BP1 and RIM-BP2 are predominantly expressed in the brain where they display overlapping but distinct expression patterns, while RIM-BP3 is almost exclusively expressed in the testis and is essential in spermiogenesis. The SH3 domains of RIM-BPs bind to the PxxP motifs of RIM1, RIM2, and L-type (alpha1D) and N-type (alpha1B) calcium channel subunits. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 61

>gnl|CDD|212911 cd11978, SH3_VAV3_2, C-terminal (or second) Src homology 3 domain of VAV3 protein

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)

Query: 66  HDISSRRHTDNFTELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVE 116
           +D  +R    +  ELS  KGD++ +  ++  N W+ GE N  +G FP  YVE
Sbjct: 7   YDFCAR----DMRELSLLKGDVVKIYTKMSTNGWWRGEVNGRVGWFPSTYVE 54

VAV3 is ubiquitously expressed and functions as a phosphorylation-dependent guanine nucleotide exchange factor (GEF) for RhoA, RhoG, and Rac1. It has been implicated to function in the hematopoietic, bone, cerebellar, and cardiovascular systems. VAV3 is essential in axon guidance in neurons that control blood pressure and respiration. It is overexpressed in prostate cancer cells and it plays a role in regulating androgen receptor transcriptional activity. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212777 cd11843, SH3_PACSIN, Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIF-VRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           ELSFK GDI+  +  + ++ W +G  +  +GL+P NYVE
Sbjct: 15  ELSFKAGDILTKLEEEDEQGWCKGRLDGRVGLYPANYVE 53

PACSINs, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. They bind both dynamin and Wiskott-Aldrich syndrome protein (WASP), and may provide direct links between the actin cytoskeletal machinery through WASP and dynamin-dependent endocytosis. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212945 cd12012, SH3_RIM-BP_2, Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVE 116
           EL FK+G +I V    D + +Y GE N   GL P N V 
Sbjct: 23  ELPFKEGQLIKVYGDKDADGFYLGEINGRRGLVPCNMVS 61

RIMs binding proteins (RBPs, RIM-BPs) associate with calcium channels present in photoreceptors, neurons, and hair cells; they interact simultaneously with specific calcium channel subunits, and active zone proteins, RIM1 and RIM2. RIMs are part of the matrix at the presynaptic active zone and are associated with synaptic vesicles through their interaction with the small GTPase Rab3. RIM-BPs play a role in regulating synaptic transmission by serving as adaptors and linking calcium channels with the synaptic vesicle release machinery. RIM-BPs contain three SH3 domains and two to three fibronectin III repeats. Invertebrates contain one, while vertebrates contain at least two RIM-BPs, RIM-BP1 and RIM-BP2. RIM-BP1 is also called peripheral-type benzodiazapine receptor associated protein 1 (PRAX-1). Mammals contain a third protein, RIM-BP3. RIM-BP1 and RIM-BP2 are predominantly expressed in the brain where they display overlapping but distinct expression patterns, while RIM-BP3 is almost exclusively expressed in the testis and is essential in spermiogenesis. The SH3 domains of RIM-BPs bind to the PxxP motifs of RIM1, RIM2, and L-type (alpha1D) and N-type (alpha1B) calcium channel subunits. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|212924 cd11991, SH3_Intersectin1_3, Third Src homology 3 domain (or SH3C) of Intersectin-1

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           +L+F++GD+I V ++ D +W+ G      G+FP NYV
Sbjct: 15  DLTFQQGDVILVTKK-DGDWWTGTVGDKTGVFPSNYV 50

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The third SH3 domain (or SH3C) of ITSN1 has been shown to bind many proteins including dynamin1/2, CIN85, c-Cbl, SHIP2, Reps1, synaptojanin-1, and WNK, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212712 cd11778, SH3_Bzz1_2, Second Src Homology 3 domain of Bzz1 and similar domains

 Score = 38.2 bits (89), Expect = 1e-04
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNY 114
           E+S + GD I V R  D + W  GE N + GLFP +Y
Sbjct: 15  EISIRVGDRIAVIRGDDGSGWTYGEINGVKGLFPTSY 51

Bzz1 (or Bzz1p) is a WASP/Las17-interacting protein involved in endocytosis and trafficking to the vacuole. It physically interacts with type I myosins and functions in the early steps of endocytosis. Together with other proteins, it induces membrane scission in yeast. Bzz1 contains an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), a central coiled-coil, and two C-terminal SH3 domains. This model represents the second C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212759 cd11825, SH3_PLCgamma, Src homology 3 domain of Phospholipase C (PLC) gamma

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMI-GLFPFNYVE 116
           ELSF K  II    + D  W+ G++       FP NYVE
Sbjct: 15  ELSFCKHAIITNVEKEDGGWWRGDYGGKKQKWFPANYVE 53

PLC catalyzes the hydrolysis of phosphatidylinositol (4,5)-bisphosphate [PtdIns(4,5)P2] to produce Ins(1,4,5)P3 and diacylglycerol (DAG) in response to various receptors. Ins(1,4,5)P3 initiates the calcium signaling cascade while DAG functions as an activator of PKC. PLCgamma catalyzes this reaction in tyrosine kinase-dependent signaling pathways. It is activated and recruited to its substrate at the membrane. Vertebrates contain two forms of PLCgamma, PLCgamma1, which is widely expressed, and PLCgamma2, which is primarily found in haematopoietic cells. PLCgamma contains a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, two catalytic regions of PLC domains that flank two tandem SH2 domains, followed by a SH3 domain and C2 domain. The SH3 domain of PLCgamma1 directly interacts with dynamin-1 and can serve as a guanine nucleotide exchange factor (GEF). It also interacts with Cbl, inhibiting its phosphorylation and activity. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212978 cd12045, SH3_SKAP2, Src Homology 3 domain of Src Kinase-Associated Phosphoprotein 2

 Score = 38.0 bits (88), Expect = 2e-04
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 79  ELSFKKGDIIFV-RRQVDK-NWYEGEHNAMIGLFPFNYV 115
           ELSFK+GD I++  ++ ++  W+ GE    IGL P  Y+
Sbjct: 15  ELSFKRGDTIYILSKEYNRFGWWVGEMKGTIGLVPKAYI 53

SKAP2, also called SKAP55-Related (SKAP55R) or SKAP55 homolog (SKAP-HOM or SKAP55-HOM), is an immune cell-specific adaptor protein that plays an important role in adhesion and migration of B-cells and macrophages. Binding partners include ADAP (adhesion and degranulation-promoting adaptor protein), YopH, SHPS1, and HPK1. SKAP2 has also been identified as a substrate for lymphoid-specific tyrosine phosphatase (Lyp), which has been implicated in a wide variety of autoimmune diseases. It contains a pleckstrin homology (PH) domain, a C-terminal SH3 domain, and several tyrosine phosphorylation sites. Like SKAP1, SKAP2 is expected to bind primarily to a proline-rich region of ADAP through its SH3 domain; its degradation may be regulated by ADAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212880 cd11947, SH3_GRAP2_N, N-terminal Src homology 3 domain of GRB2-related adaptor protein 2

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSFKKGD++ +    D  W++ E N   G  P N+V+I
Sbjct: 15  ELSFKKGDVLKILSS-DDIWFKAELNGEEGYVPKNFVDI 52

GRAP2 is also called GADS (GRB2-related adapter downstream of Shc), GrpL, GRB2L, Mona, or GRID (Grb2-related protein with insert domain). It is expressed specifically in the hematopoietic system. It plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. It also have roles in antigen-receptor and tyrosine kinase mediated signaling. GRAP2 is unique from other GRB2-like adaptor proteins in that it can be regulated by caspase cleavage. It contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The N-terminal SH3 domain of the related protein GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212800 cd11866, SH3_SKAP1-like, Src Homology 3 domain of Src Kinase-Associated Phosphoprotein 1 and similar proteins

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 2/39 (5%)

Query: 79  ELSFKKGDIIFV-RRQVDK-NWYEGEHNAMIGLFPFNYV 115
           ELSFK+GD+I++  ++ D   W+ GE N  +GL P +Y+
Sbjct: 15  ELSFKRGDLIYIISKEYDSFGWWVGELNGKVGLVPKDYL 53

This subfamily is composed of SKAP1, SKAP2, and similar proteins. SKAP1 and SKAP2 are immune cell-specific adaptor proteins that play roles in T- and B-cell adhesion, respectively, and are thus important in the migration of T- and B-cells to sites of inflammation and for movement during T-cell conjugation with antigen-presenting cells. Both SKAP1 and SKAP2 bind to ADAP (adhesion and degranulation-promoting adaptor protein), among many other binding partners. They contain a pleckstrin homology (PH) domain, a C-terminal SH3 domain, and several tyrosine phosphorylation sites. The SH3 domain of SKAP1 is necessary for its ability to regulate T-cell conjugation with antigen-presenting cells and the formation of LFA-1 clusters. SKAP1 binds primarily to a proline-rich region of ADAP through its SH3 domain; its degradation is regulated by ADAP. A secondary interaction occurs via the ADAP SH3 domain and the RKxxYxxY motif in SKAP1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212834 cd11901, SH3_Nck1_2, Second Src Homology 3 domain of Nck1 adaptor protein

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           ELS  KG  + V  +    W+ G +N  +G FP NYV
Sbjct: 17  ELSLVKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 53

Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212705 cd11771, SH3_Pex13p_fungal, Src Homology 3 domain of fungal peroxisomal membrane protein Pex13p

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 74  TDNFTELSFKKGDIIFVRRQVDK-----NWYEGE-HNAMIGLFPFNYVEI 117
            +   ELS KKGDI+ V  + D       W++G   +  IG FP NYVE+
Sbjct: 11  ENPEMELSLKKGDIVAVLSKTDPLGRDSEWWKGRTRDGRIGWFPSNYVEV 60

Pex13p, located in the peroxisomal membrane, contains two transmembrane regions and a C-terminal SH3 domain. It binds to the peroxisomal targeting type I (PTS1) receptor Pex5p and the docking factor Pex14p through its SH3 domain. It is essential for both PTS1 and PTS2 protein import pathways into the peroxisomal matrix. Pex13p binds Pex14p, which contains a PxxP motif, in a classical fashion to the proline-rich ligand binding site of its SH3 domain. It binds the WxxxF/Y motif of Pex5p in a novel site that does not compete with Pex14p binding. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 60

>gnl|CDD|212727 cd11793, SH3_ephexin1_like, Src homology 3 domain of ephexin-1-like SH3 domain containing Rho guanine nucleotide exchange factors

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVE 116
           EL+ ++GD++ V R++   WYEGE   +   G FP +Y E
Sbjct: 15  ELTLEEGDVVNVLRKMPDGWYEGERLRDGERGWFPSSYTE 54

Members of this family contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), and C-terminal SH3 domains. They include the Rho guanine nucleotide exchange factors ARHGEF5, ARHGEF16, ARHGEF19, ARHGEF26, ARHGEF27 (also called ephexin-1), and similar proteins, and are also called ephexins because they interact directly with ephrin A receptors. GEFs interact with Rho GTPases via their DH domains to catalyze nucleotide exchange by stabilizing the nucleotide-free GTPase intermediate. They play important roles in neuronal development. The SH3 domains of ARHGEFs play an autoinhibitory role through intramolecular interactions with a proline-rich region N-terminal to the DH domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212762 cd11828, SH3_ARHGEF9_like, Src homology 3 domain of ARHGEF9-like Rho guanine nucleotide exchange factors

 Score = 37.0 bits (86), Expect = 4e-04
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           EL FK GD+I V    DK+W+ G      G FP ++V +
Sbjct: 15  ELGFKAGDVIEVLDMSDKDWWWGSIRDEEGWFPASFVRL 53

Members of this family contain a SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains. They include the Rho guanine nucleotide exchange factors ARHGEF9, ASEF (also called ARHGEF4), ASEF2, and similar proteins. GEFs activate small GTPases by exchanging bound GDP for free GTP. ARHGEF9 specifically activates Cdc42, while both ASEF and ASEF2 can activate Rac1 and Cdc42. ARHGEF9 is highly expressed in the brain and it interacts with gephyrin, a postsynaptic protein associated with GABA and glycine receptors. ASEF plays a role in angiogenesis and cell migration. ASEF2 is important in cell migration and adhesion dynamics. ASEF exists in an autoinhibited form and is activated upon binding of the tumor suppressor APC (adenomatous polyposis coli), leading to the activation of Rac1 or Cdc42. In its autoinhibited form, the SH3 domain of ASEF forms an extensive interface with the DH and PH domains, blocking the Rac binding site. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212835 cd11902, SH3_Nck2_2, Second Src Homology 3 domain of Nck2 adaptor protein

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           ELS  KG  + V  +    W+ G +N  IG FP NYV
Sbjct: 16  ELSLVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 52

Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212820 cd11887, SH3_Bbc1, Src Homology 3 domain of Bbc1 and similar domains

 Score = 37.3 bits (87), Expect = 4e-04
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 5/43 (11%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-----NAMIGLFPFNYVE 116
           +L+F  G +I V  + D +WY GE+     N   G+FP N+VE
Sbjct: 17  DLNFDVGQLITVTEEEDADWYFGEYVDSNGNTKEGIFPKNFVE 59

This subfamily is composed of Saccharomyces cerevisiae Bbc1p, also called Mti1p (Myosin tail region-interacting protein), and similar proteins. Bbc1p interacts with and regulates type I myosins in yeast, Myo3p and Myo5p, which are involved in actin cytoskeletal reorganization. It also binds and inhibits Las17, a WASp family protein that functions as an activator of the Arp2/3 complex. Bbc1p contains an N-terminal SH3 domain. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 60

>gnl|CDD|212848 cd11915, SH3_Irsp53, Src Homology 3 domain of Insulin Receptor tyrosine kinase Substrate p53

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 68  ISSRRHTDNFTELSFKKGDII-FVRRQVDKNWY--EGEHNAMIGLFPFNYVEII 118
           I S    DN T LSFK+GD I  +  +    W+  E E   M G FPF+Y  ++
Sbjct: 6   IFSHAAGDNSTLLSFKEGDYITLLVPEARDGWHYGECEKTKMRGWFPFSYTRVL 59

IRSp53 is also known as BAIAP2 (Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2). It is a scaffolding protein that takes part in many signaling pathways including Cdc42-induced filopodia formation, Rac-mediated lamellipodia extension, and spine morphogenesis. IRSp53 exists as multiple splicing variants that differ mainly at the C-termini. One variant (T-form) is expressed exclusively in human breast cancer cells. The gene encoding IRSp53 is a putative susceptibility gene for Gilles de la Tourette syndrome. IRSp53 can also mediate the recruitment of effector proteins Tir and EspFu, which regulate host cell actin reorganization, to bacterial attachment sites. It contains an N-terminal IMD, a CRIB (Cdc42 and Rac interactive binding motif), an SH3 domain, and a WASP homology 2 (WH2) actin-binding motif at the C-terminus. The SH3 domain of IRSp53 has been shown to bind the proline-rich C-terminus of EspFu. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212985 cd12052, SH3_CIN85_1, First Src Homology 3 domain (SH3A) of Cbl-interacting protein of 85 kDa

 Score = 36.8 bits (85), Expect = 5e-04
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL+   GDII   ++ D  W+EGE     GLFP N+V
Sbjct: 15  ELTITVGDIITKIKKDDGGWWEGEIKGRRGLFPDNFV 51

CIN85, also called SH3 domain-containing kinase-binding protein 1 (SH3KBP1) or CD2-binding protein 3 (CD2BP3) or Ruk, is an adaptor protein that is involved in the downregulation of receptor tyrosine kinases by facilitating endocytosis through interaction with endophilin-associated ubiquitin ligase Cbl proteins. It is also important in many other cellular processes including vesicle-mediated transport, cytoskeletal remodelling, apoptosis, cell adhesion and migration, and viral infection, among others. CIN85 exists as multiple variants from alternative splicing; the main variant contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the first SH3 domain (SH3A) of CIN85; SH3A binds to internal proline-rich motifs within the proline-rich region. This intramolecular interaction serves as a regulatory mechanism to keep CIN85 in a closed conformation, preventing the recruitment of other proteins. SH3A has also been shown to bind ubiquitin and to an atypical PXXXPR motif at the C-terminus of Cbl and the cytoplasmic end of the cell adhesion protein CD2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212866 cd11933, SH3_Nebulin_C, C-terminal Src Homology 3 domain of Nebulin

 Score = 36.5 bits (84), Expect = 7e-04
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEG--EHNAMIGLFPFNYVEII 118
           E+SFK GD I   + +D+ W  G  +     G+ P NYVE I
Sbjct: 17  EVSFKDGDTIVNVQTIDEGWMYGTVQRTGKTGMLPANYVEAI 58

Nebulin is a giant filamentous protein (600-900 kD) that is expressed abundantly in skeletal muscle. It binds to actin thin filaments and regulates its assembly and function. Nebulin was thought to be part of a molecular ruler complex that is critical in determining the lengths of actin thin filaments in skeletal muscle since its length, which varies due to alternative splicing, correlates with the length of thin filaments in various muscle types. Recent studies indicate that nebulin regulates thin filament length by stabilizing the filaments and preventing depolymerization. Mutations in nebulin can cause nemaline myopathy, characterized by muscle weakness which can be severe and can lead to neonatal lethality. Nebulin contains an N-terminal LIM domain, many nebulin repeats/super repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212714 cd11780, SH3_Sorbs_3, Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing (Sorbs) proteins and similar domains

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNA--MIGLFPFNYVE 116
           EL  ++GDI++V  + D  W+ G      + G FP NYV 
Sbjct: 15  ELELREGDIVYVMEKCDDGWFVGTSERTGLFGTFPGNYVA 54

This family, also called the vinexin family, is composed predominantly of adaptor proteins containing one sorbin homology (SoHo) and three SH3 domains. Members include the third SH3 domains of Sorbs1 (or ponsin), Sorbs2 (or ArgBP2), Vinexin (or Sorbs3), and similar domains. They are involved in the regulation of cytoskeletal organization, cell adhesion, and growth factor signaling. Members of this family bind multiple partners including signaling molecules like c-Abl, c-Arg, Sos, and c-Cbl, as well as cytoskeletal molecules such as vinculin and afadin. They may have overlapping functions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212923 cd11990, SH3_Intersectin2_2, Second Src homology 3 domain (or SH3B) of Intersectin-2

 Score = 36.2 bits (83), Expect = 9e-04
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 74  TDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
            DN   L+F K DII V  Q  +NW+ GE +   G FP +YV++
Sbjct: 12  KDN--HLNFSKNDIITVLEQ-QENWWFGEVHGGRGWFPKSYVKL 52

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The second SH3 domain (or SH3B) of ITSN2 is expected to bind protein partners, similar to ITSN1 which has been shown to bind WNK and CdGAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212867 cd11934, SH3_Lasp1_C, C-terminal Src Homology 3 domain of LIM and SH3 domain protein 1

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEG--EHNAMIGLFPFNYVEII 118
           E+SF+ GD I   +Q+D  W  G  E     G+ P NYVE I
Sbjct: 18  EVSFQDGDTIVNVQQIDDGWMYGTVERTGDTGMLPANYVEAI 59

Lasp1 is a cytoplasmic protein that binds focal adhesion proteins and is involved in cell signaling, migration, and proliferation. It is overexpressed in several cancer cells including breast, ovarian, bladder, and liver. In cancer cells, it can be found in the nucleus; its degree of nuclear localization correlates with tumor size and poor prognosis. Lasp1 is a 36kD protein containing an N-terminal LIM domain, two nebulin repeats, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212789 cd11855, SH3_Sho1p, Src homology 3 domain of High osmolarity signaling protein Sho1p

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           D+  ELSF+KG+I+ V     K W   + N   G+ P NY+++
Sbjct: 13  DDPNELSFEKGEILEVSDTSGKWWQARKSNGETGICPSNYLQL 55

Sho1p (or Sho1), also called SSU81 (Suppressor of SUA8-1 mutation), is a yeast membrane protein that regulates adaptation to high salt conditions by activating the HOG (high-osmolarity glycerol) pathway. High salt concentrations lead to the localization to the membrane of the MAPKK Pbs2, which is then activated by the MAPKK Ste11 and in turn, activates the MAPK Hog1. Pbs2 is localized to the membrane though the interaction of its PxxP motif with the SH3 domain of Sho1p. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212891 cd11958, SH3_RUSC1, Src homology 3 domain of RUN and SH3 domain-containing protein 1

 Score = 35.6 bits (82), Expect = 0.001
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 73  HTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNY 114
           H  + ++LSF+KG+ + V   VD++W         GL P  Y
Sbjct: 8   HAGSESQLSFRKGEELQVLGTVDEDWIRCRRGDREGLVPVGY 49

RUSC1, also called NESCA (New molecule containing SH3 at the carboxy-terminus), is highly expressed in the brain and is translocated to the nuclear membrane from the cytoplasm upon stimulation with neurotrophin. It plays a role in facilitating neurotrophin-dependent neurite outgrowth. It also interacts with NEMO (or IKKgamma) and may function in NEMO-mediated activation of NF-kB. RUSC proteins are adaptor proteins consisting of RUN, leucine zipper, and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212816 cd11883, SH3_Sdc25, Src Homology 3 domain of Sdc25/Cdc25 guanine nucleotide exchange factors

 Score = 35.7 bits (83), Expect = 0.001
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 73  HTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMI-----GLFPFNY 114
              +  +LSFK GDII+V  +    W++G   +       G FP NY
Sbjct: 9   TPKSKNQLSFKAGDIIYVLNKDPSGWWDGVIISSSGKVKRGWFPSNY 55

This subfamily is composed of the Saccharomyces cerevisiae guanine nucleotide exchange factors (GEFs) Sdc25 and Cdc25, and similar proteins. These GEFs regulate Ras by stimulating the GDP/GTP exchange on Ras. Cdc25 is involved in the Ras/PKA pathway that plays an important role in the regulation of metabolism, stress responses, and proliferation, depending on available nutrients and conditions. Proteins in this subfamily contain an N-terminal SH3 domain as well as REM (Ras exchanger motif) and RasGEF domains at the C-terminus. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|212716 cd11782, SH3_Sorbs_2, Second Src Homology 3 domain of Sorbin and SH3 domain containing (Sorbs) proteins and similar domains

 Score = 35.0 bits (81), Expect = 0.002
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 134 QARAKFNFVAQTHLELSLVK 153
           +ARAK+NF A T +ELS  K
Sbjct: 1   EARAKYNFNADTGVELSFRK 20

This family, also called the vinexin family, is composed predominantly of adaptor proteins containing one sorbin homology (SoHo) and three SH3 domains. Members include the second SH3 domains of Sorbs1 (or ponsin), Sorbs2 (or ArgBP2), Vinexin (or Sorbs3), and similar domains. They are involved in the regulation of cytoskeletal organization, cell adhesion, and growth factor signaling. Members of this family bind multiple partners including signaling molecules like c-Abl, c-Arg, Sos, and c-Cbl, as well as cytoskeletal molecules such as vinculin and afadin. They may have overlapping functions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212908 cd11975, SH3_ARHGEF9, Src homology 3 domain of the Rho guanine nucleotide exchange factor ARHGEF9

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 15/39 (38%), Positives = 25/39 (64%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           EL+FK GD+I V    +K+W+ G+ +   G FP ++V +
Sbjct: 20  ELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRL 58

ARHGEF9, also called PEM2 or collybistin, selectively activates Cdc42 by exchanging bound GDP for free GTP. It is highly expressed in the brain and it interacts with gephyrin, a postsynaptic protein associated with GABA and glycine receptors. Mutations in the ARHGEF9 gene cause X-linked mental retardation with associated features like seizures, hyper-anxiety, aggressive behavior, and sensory hyperarousal. ARHGEF9 contains a SH3 domain followed by RhoGEF (also called Dbl-homologous or DH) and Pleckstrin Homology (PH) domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 35.3 bits (82), Expect = 0.002
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 6/52 (11%)

Query: 65  LHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNY 114
           L+D  +R   D    LSFKKGD + +    D +W+   H      G  P NY
Sbjct: 5   LYDYEARTDDD----LSFKKGDRLQILDDSDGDWWLARHLSTGKEGYIPSNY 52

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212693 cd11759, SH3_CRK_C, C-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 78  TELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           T L+ + GD++ V +  V   W EGE N  +G FPF +VE+
Sbjct: 18  TALALEVGDLVKVTKINVSGQW-EGELNGKVGHFPFTHVEL 57

CRK adaptor proteins consists of SH2 and SH3 domains, which bind tyrosine-phosphorylated peptides and proline-rich motifs, respectively. They function downstream of protein tyrosine kinases in many signaling pathways started by various extracellular signals, including growth and differentiation factors. Cellular CRK (c-CRK) contains a single SH2 domain, followed by N-terminal and C-terminal SH3 domains. It is involved in the regulation of many cellular processes including cell growth, motility, adhesion, and apoptosis. CRK has been implicated in the malignancy of various human cancers. The C-terminal SH3 domain of CRK has not been shown to bind any target protein; it acts as a negative regulator of CRK function by stabilizing a structure that inhibits the access by target proteins to the N-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212992 cd12059, SH3_MLK1-3, Src Homology 3 domain of Mixed Lineage Kinases 1, 2, and 3

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 5/42 (11%)

Query: 79  ELSFKKGDIIFVRRQV-----DKNWYEGEHNAMIGLFPFNYV 115
           EL+ ++GD + V  +      D+ W+ G+ N  +G+FP NYV
Sbjct: 15  ELTLRRGDRVEVLSKDSAVSGDEGWWTGKINDRVGIFPSNYV 56

MLKs 1, 2, and 3 are Serine/Threonine Kinases (STKs), catalyzing the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. MLKs act as mitogen-activated protein kinase kinase kinases (MAP3Ks, MKKKs, MAPKKKs), which phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MLKs play roles in immunity and inflammation, as well as in cell death, proliferation, and cell cycle regulation. Little is known about the specific function of MLK1, also called MAP3K9. It is capable of activating the c-Jun N-terminal kinase pathway. Mice lacking both MLK1 and MLK2 are viable, fertile, and have normal life spans. MLK2, also called MAP3K10, is abundant in brain, skeletal muscle, and testis. It functions upstream of the MAPK, c-Jun N-terminal kinase. It binds hippocalcin, a calcium-sensor protein that protects neurons against calcium-induced cell death. Both MLK2 and hippocalcin may be associated with the pathogenesis of Parkinson's disease. MLK3, also called MAP3K11, is highly expressed in breast cancer cells and its signaling through c-Jun N-terminal kinase has been implicated in the migration, invasion, and malignancy of cancer cells. It also functions as a negative regulator of Inhibitor of Nuclear Factor-KappaB Kinase (IKK) and thus, impacts inflammation and immunity. MLKs contain an SH3 domain, a catalytic kinase domain, a leucine zipper, a proline-rich region, and a CRIB domain that mediates binding to GTP-bound Cdc42 and Rac. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212926 cd11993, SH3_Intersectin1_4, Fourth Src homology 3 domain (or SH3D) of Intersectin-1

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 5/45 (11%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNA-----MIGLFPFNYVEII 118
           +L+   G +I +R++    W+EGE  A      IG FP NYV+++
Sbjct: 19  QLTLAPGQLILIRKKNPGGWWEGELQARGKKRQIGWFPANYVKLL 63

Intersectin-1 (ITSN1) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN1 localizes in membranous organelles, CCPs, the Golgi complex, and may be involved in the cell membrane trafficking system. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The fourth SH3 domain (or SH3D) of ITSN1 has been shown to bind SHIP2, Numb, CdGAP, and N-WASP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 65

>gnl|CDD|212767 cd11833, SH3_Stac_1, First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing (Stac) proteins

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 65  LHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           L+    + + D    L  + GD I +    +++W++G+    +G FP N+V
Sbjct: 5   LYKFKPQENED----LEMRPGDKITLLDDSNEDWWKGKIEDRVGFFPANFV 51

Stac proteins are putative adaptor proteins that contain a cysteine-rich C1 domain and one or two SH3 domains at the C-terminus. There are three mammalian members (Stac1, Stac2, and Stac3) of this family. Stac1 and Stac3 contain two SH3 domains while Stac2 contains a single SH3 domain at the C-terminus. This model represents the first C-terminal SH3 domain of Stac1 and Stac3, and the single C-terminal SH3 domain of Stac2. Stac1 and Stac2 have been found to be expressed differently in mature dorsal root ganglia (DRG) neurons. Stac1 is mainly expressed in peptidergic neurons while Stac2 is found in a subset of nonpeptidergic and all trkB+ neurons. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212691 cd11757, SH3_SH3BP4, Src Homology 3 domain of SH3 domain-binding protein 4

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
            NFT L F KGD ++V       W+   +   +G  P +YV+
Sbjct: 11  TNFTTLKFSKGDHLYVLDTSGGEWWYAHNTTEMGYIPSSYVQ 52

SH3 domain-binding protein 4 (SH3BP4) is also called transferrin receptor trafficking protein (TTP). SH3BP4 is an endocytic accessory protein that interacts with endocytic proteins including clathrin and dynamin, and regulates the internalization of the transferrin receptor (TfR). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212881 cd11948, SH3_GRAP_N, N-terminal Src homology 3 domain of GRB2-related adaptor protein

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           EL F+KGDI+ +   + D+NWY+ E     G  P NY+++
Sbjct: 15  ELPFQKGDILKILNMEDDQNWYKAELQGREGYIPKNYIKV 54

GRAP is a GRB-2 like adaptor protein that is highly expressed in lymphoid tissues. It acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. It has been identified as a regulator of TGFbeta signaling in diabetic kidney tubules and may have a role in the pathogenesis of the disease. GRAP contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The N-terminal SH3 domain of the related protein GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212921 cd11988, SH3_Intersectin2_1, First Src homology 3 domain (or SH3A) of Intersectin-2

 Score = 34.8 bits (80), Expect = 0.003
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 10/47 (21%)

Query: 76  NFTELSFKKGDIIFVRRQVDKN------WYEGEHNAMIGLFPFNYVE 116
           N  E+SF  GDII    QVD+       W  G      G FP NYVE
Sbjct: 14  NHDEMSFNAGDII----QVDEKTVGEPGWLYGSFQGNFGWFPCNYVE 56

Intersectin-2 (ITSN2) is an adaptor protein that functions in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. It plays a role in clathrin-coated pit (CCP) formation. It binds to many proteins through its multidomain structure and facilitate the assembly of multimeric complexes. ITSN2 also functions as a specific GEF for Cdc42 activation in epithelial morphogenesis, and is required in mitotic spindle orientation. It exists in alternatively spliced short and long isoforms. The short isoform contains two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoform, in addition, contains RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. The first SH3 domain (or SH3A) of ITSN2 is expected to bind many protein partners, similar to ITSN1 which has been shown to bind Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212890 cd11957, SH3_RUSC2, Src homology 3 domain of RUN and SH3 domain-containing protein 2

 Score = 34.5 bits (79), Expect = 0.003
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           +LSF KGDI+ V  + D +W         GL P  YV
Sbjct: 15  QLSFNKGDILQVLSRADGDWLRCSLGPDSGLVPIAYV 51

RUSC2, also called Iporin or Interacting protein of Rab1, is expressed ubiquitously with highest amounts in the brain and testis. It interacts with the small GTPase Rab1 and the Golgi matrix protein GM130, and may function in linking GTPases to certain intracellular signaling pathways. RUSC proteins are adaptor proteins consisting of RUN, leucine zipper, and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212859 cd11926, SH3_SH3RF1_3, Third Src Homology 3 domain of SH3 domain containing ring finger 1, an E3 ubiquitin-protein ligase

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYV 115
           EL  +KG++  V  +    W++G   H + IG+FP NYV
Sbjct: 15  ELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYV 53

SH3RF1 is also called POSH (Plenty of SH3s) or SH3MD2 (SH3 multiple domains protein 2). It is a scaffold protein that acts as an E3 ubiquitin-protein ligase. It plays a role in calcium homeostasis through the control of the ubiquitin domain protein Herp. It may also have a role in regulating death receptor mediated and JNK mediated apoptosis. SH3RF1 also enhances the ubiquitination of ROMK1 potassium channel resulting in its increased endocytosis. It contains an N-terminal RING finger domain and four SH3 domains. This model represents the third SH3 domain, located in the middle, of SH3RF1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	225
KOG4225|consensus	489		99.72
KOG1029|consensus	1118		99.65
KOG4226|consensus	379		99.64
KOG4348|consensus	627		99.63
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	99.63
KOG4348|consensus	627		99.62
KOG1029|consensus	1118		99.55
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	99.52
KOG2199|consensus	462		99.45
KOG2070|consensus	661		99.38
KOG3601|consensus	222		99.36
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	99.32
KOG1118|consensus	366		99.32
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	99.25
KOG4226|consensus	379		99.25
KOG4792|consensus	293		99.22
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	99.2
KOG4225|consensus	489		99.15
KOG0162|consensus	1106		99.15
KOG2996|consensus	865		99.14
KOG1264|consensus	1267		99.12
KOG3632|consensus	1335		99.01
KOG2856|consensus	472		98.9
KOG2546|consensus	483		98.84
KOG4278|consensus	1157		98.73
KOG3601|consensus	222		98.65
KOG0515|consensus	752		98.62
KOG3875|consensus	362		98.51
KOG3655|consensus	484		98.51
KOG0197|consensus	468		98.51
KOG1702|consensus	264		98.47
KOG1843|consensus	473		98.35
KOG0609|consensus	542		98.31
KOG2996|consensus	865		98.27
KOG2222|consensus	848		98.11
KOG3523|consensus	695		97.94
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	97.81
KOG4792|consensus	293		97.64
KOG2528|consensus	490		97.63
KOG1451|consensus	812		97.6
KOG4773|consensus	386		97.6
KOG3775|consensus	482		97.54
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	97.47
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	97.43
KOG3632|consensus	1335		97.35
KOG3557|consensus	721		97.34
KOG4575|consensus	874		97.34
KOG4429|consensus	421		97.26
KOG2199|consensus	462		97.23
KOG3771|consensus	460		97.04
KOG2070|consensus	661		96.93
KOG3725|consensus	375		96.41
KOG1118|consensus	366		96.39
KOG0162|consensus	1106		96.38
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	96.29
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	96.28
KOG0515|consensus	752		96.26
KOG2546|consensus	483		95.8
KOG2856|consensus	472		95.75
PF08239	55	SH3_3: Bacterial SH3 domain; InterPro: IPR013247 S	95.63
KOG3565|consensus	640		94.77
PF14603	89	hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.	94.55
KOG0199|consensus	1039		94.27
KOG1264|consensus	1267		94.09
smart00287	63	SH3b Bacterial SH3 domain homologues.	93.53
KOG1702|consensus	264		93.11
KOG0040|consensus	2399		92.45
PRK10884	206	SH3 domain-containing protein; Provisional	91.52
PF06347	55	SH3_4: Bacterial SH3 domain; InterPro: IPR010466 S	90.79
KOG3812|consensus	475		90.77
KOG3705|consensus	580		87.07
PF00017	77	SH2: SH2 domain; InterPro: IPR000980 The Src homol	86.86
KOG4429|consensus	421		86.65
KOG3655|consensus	484		84.14
KOG2222|consensus	848		83.89
KOG3875|consensus	362		83.14
PRK13914	481	invasion associated secreted endopeptidase; Provis	82.56
smart00252	84	SH2 Src homology 2 domains. Src homology 2 domains	81.05
KOG4773|consensus	386		80.74
KOG1843|consensus	473		80.51
cd00173	94	SH2 Src homology 2 domains; Signal transduction, i	80.06

>KOG4225|consensus

Probab=99.72  E-value=2.2e-17  Score=143.91  Aligned_cols=107  Identities=39%  Similarity=0.681  Sum_probs=90.9

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCCC----CCCc-CCCCcCcEE
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKI----RTAP-KKLSEGQAR  136 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~----~~~~-~~~~~~~~~  136 (225)
                      ++|+|+|.++    ...||+|++||||.|+.+.|.+|+.|+.+|+.|+||+|||+.+.....    .+.| +....|.++
T Consensus       233 aralf~F~~q----t~kEL~~~kGDIVyI~rkvD~nWyeGEhhGr~GifP~sYvE~~~~~e~~qP~~~~P~q~~~~g~a~  308 (489)
T KOG4225|consen  233 ARALFDFEAQ----TPKELPFNKGDIVYILRKVDQNWYEGEHHGRVGIFPASYVEILTPREKAQPARPPPQQVLEQGEAI  308 (489)
T ss_pred             hhheeccccC----CccccccCCCCEEEEEeeccCceeeeeecceecceechheeecCcccccCcCCCCccccccccccc
Confidence            7899999999    788999999999999999999999999999999999999999875221    2222 223577899


Q ss_pred             EcccccCCCccccccccccceEEecccccccccccch
Q psy15850        137 AKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR  173 (225)
Q Consensus       137 a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~  173 (225)
                      |.|+|.+....||++++|+.|+.... +++.|..+.+
T Consensus       309 A~y~F~~~s~~Els~~kge~v~L~r~-vd~nw~eG~i  344 (489)
T KOG4225|consen  309 AKYNFNADSPVELSLRKGERVTLTRQ-VDENWYEGKI  344 (489)
T ss_pred             ccCCCCCCCchhcccccCceEEEEEe-ccCceeeccc
Confidence            99999999999999999999998875 6666664333

>KOG1029|consensus

Probab=99.65  E-value=5.1e-17  Score=149.40  Aligned_cols=123  Identities=24%  Similarity=0.386  Sum_probs=105.5

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CC---eEEEeeCCcEEeecCCCCCCCcCCCCc
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NA---MIGLFPFNYVEIIPYDKIRTAPKKLSE  132 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g---~~G~~P~nyv~~~~~~~~~~~~~~~~~  132 (225)
                      +++.++.+.+|.+.    ....|++..|++|.|..+...|||.|++  +|   ..||||.+||+.+.....+..|...+.
T Consensus       978 kpeiAqVia~yvAs----~peQLsla~GqlIlIrkKn~sGWWeGELqarGkkrq~GWFPa~yVKvL~~~s~raTPa~~~v 1053 (1118)
T KOG1029|consen  978 KPEIAQVIADYVAS----GPEQLSLAPGQLILIRKKNASGWWEGELQARGKKRQIGWFPAEYVKVLEPGSGRATPATRPV 1053 (1118)
T ss_pred             Cchhhhhhhhhhcc----CchhccccCccEEEEEecCCCccchhhHhhcCCccccccccHHHhhhccCCCCcCCCCCCcc
Confidence            45567888999999    7889999999999999999999999995  45   369999999999987755566665666


Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchhHH
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEEL  185 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~e~  185 (225)
                      +.++|+|+|.+++++||+|.+||+|.|+.+ ..-.||.+-+|.+..+++.+.+
T Consensus      1054 ~qviamYdY~AqndDELsF~kgdiI~Vlnk-depeWW~Ge~ng~sGLFPSNYV 1105 (1118)
T KOG1029|consen 1054 CQVIAMYDYEAQNDDELSFKKGDIINVLNK-DEPEWWSGERNGKSGLFPSNYV 1105 (1118)
T ss_pred             ceeEEeeccccCCcccccccCCCEEEecCC-CChhhhcccccCccccCccccc
Confidence            788999999999999999999999999998 4557888888999888887553

>KOG4226|consensus

Probab=99.64  E-value=3.5e-16  Score=129.31  Aligned_cols=115  Identities=22%  Similarity=0.257  Sum_probs=86.6

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCCCCCCc----C------CC-
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAP----K------KL-  130 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~~~~~----~------~~-  130 (225)
                      +..-|.|.|+    .++||++.+|+.|.|+++..+|||+|..+|..||||+|||.+.........+    .      .+ 
T Consensus       110 AvVKf~Y~a~----~eDELsLtKGtrv~vmEKssDGWWrG~~ng~VGWFPSNYv~E~~ds~~gd~~s~~~~~~~A~a~n~  185 (379)
T KOG4226|consen  110 AVVKFNYVAE----REDELSLTKGTRVTVMEKSSDGWWRGSYNGQVGWFPSNYVTEEVDSAAGDSPSFLSLRKAASASNG  185 (379)
T ss_pred             eEEEEeeccc----cccccccccCcEEEEEEeccCcceecccCCeeccccccceehhccccccCCccceecchhhcccCC
Confidence            4567999999    7999999999999999999999999999999999999999886433221111    0      01 


Q ss_pred             C----cCcEEEcccccCCCccccccccccceEEeccc-cc-ccccccchhhhhhcc
Q psy15850        131 S----EGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VT-LQYRRPVRNEIKELI  180 (225)
Q Consensus       131 ~----~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~-~~~~f~~~~~l~e~~  180 (225)
                      .    -..+.|+|+|++.++.||+|++|+...+++.- .+ +||.-.-.+.-+.++
T Consensus       186 ~~s~vl~vVvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwkarn~~G~vGLV  241 (379)
T KOG4226|consen  186 QGSRVLHVVVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKARNARGQVGLV  241 (379)
T ss_pred             CCceEEEEEEEEecccCCChhhcccccCceeEeccCCCCCchHHhhcccCCcccee
Confidence            1    12367999999999999999999999999873 33 445433333333333

>KOG4348|consensus

Probab=99.63  E-value=7.3e-17  Score=140.56  Aligned_cols=127  Identities=23%  Similarity=0.354  Sum_probs=101.9

Q ss_pred             hhhcccceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCCC---------
Q psy15850         53 YQEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKI---------  123 (225)
Q Consensus        53 ~~~~~~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~---------  123 (225)
                      .+..++...|.+.|.|.++    +.+||.|+.||+|.|+.....|||.|.++|+.|+||+|||..++....         
T Consensus        94 ~~~q~~~r~c~v~f~Y~pq----ndDELelkVGDiIeli~eVEeGWw~G~Lngk~GmFPsNFVkel~~~sde~~~aqd~~  169 (627)
T KOG4348|consen   94 PPPQPQARICVVTFAYSPQ----NDDELELKVGDIIELISEVEEGWWKGKLNGKVGMFPSNFVKELPTPSDESAAAQDPA  169 (627)
T ss_pred             CCCCccceeEEEEEeecCC----CCceeeeeeccHHHhhhHhhhhhhhceecCcccccchhhceecCCCCcchhhhcCcc
Confidence            3344556679999999999    899999999999999999999999999999999999999999853311         


Q ss_pred             ------------------------CC--Cc---------------------------------------------CC---
Q psy15850        124 ------------------------RT--AP---------------------------------------------KK---  129 (225)
Q Consensus       124 ------------------------~~--~~---------------------------------------------~~---  129 (225)
                                              +.  .|                                             +.   
T Consensus       170 ~S~stlagst~~~ps~s~~SE~a~gsv~qPKkI~g~gfgdIfk~~pVklr~rt~~sete~~p~~~~i~~~l~asT~s~d~  249 (627)
T KOG4348|consen  170 ASASTLAGSTARTPSKSIGSEVAMGSVTQPKKIDGTGFGDIFKPAPVKLRLRTKFSETEKKPEKPFISSALSASTQSVDI  249 (627)
T ss_pred             cchhhhcCcCCCCCcccccchhhcccccCcccccCCCcccccCCccceecccccccccccccccchhhhccCccccCccc
Confidence                                    00  00                                             00   


Q ss_pred             ---------CCcCcEEEcccccCCCccccccccccceEEeccc-ccccccccchhhhhhccchh
Q psy15850        130 ---------LSEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       130 ---------~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~f~~~~~l~e~~~~~  183 (225)
                               .....|.+.|-|.+++++||+|++||++..+.++ ..-|||.+.+|+-...++.+
T Consensus       250 tktd~~~~tKtKeycrv~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGELnGk~GvFPDN  313 (627)
T KOG4348|consen  250 TKTDTAETTKTKEYCRVKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGELNGKKGVFPDN  313 (627)
T ss_pred             cccccccchhhhhheeeeeeecCCCccceeeccccEEEEecccccccceeeeeecCccccCCch
Confidence                     0112489999999999999999999999888865 44799999999888777653

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=99.63  E-value=8.3e-16  Score=97.38  Aligned_cols=49  Identities=47%  Similarity=0.803  Sum_probs=44.8

Q ss_pred             EeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEE
Q psy15850         64 ELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE  116 (225)
Q Consensus        64 al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~  116 (225)
                      |+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+
T Consensus         1 Al~~y~~~----~~dELs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yV~   49 (49)
T PF14604_consen    1 ALYDYEAQ----DPDELSFKKGDVITVLEKSDDGWWYGRNTGRTGLFPANYVE   49 (49)
T ss_dssp             ESSCBCSS----STTB-EB-TTEEEEEEEESSTSEEEEEETTEEEEEEGGGEE
T ss_pred             CCccCCCC----CcCEeeEcCCCEEEEEEeCCCCEEEEEECCEEEEECHHhCC
Confidence            78999999    78899999999999999989999999999999999999996

...

>KOG4348|consensus

Probab=99.62  E-value=5e-17  Score=141.59  Aligned_cols=117  Identities=21%  Similarity=0.294  Sum_probs=97.1

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC-----CC-------------
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD-----KI-------------  123 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~-----~~-------------  123 (225)
                      +..-|||+|.    ..+||+++.|+||.-+.+.+.|||.|+++|+.|.||-|||..+...     -.             
T Consensus         4 ~ive~dy~a~----hddelti~vgeii~nvkk~e~gw~egelngrrg~fpdnfV~eik~e~k~d~l~nk~~r~~l~q~~s   79 (627)
T KOG4348|consen    4 YIVEYDYDAV----HDDELTIRVGEIIRNVKKLEEGWLEGELNGRRGQFPDNFVVEIKVEFKDDDLVNKLSRDSLVQMTS   79 (627)
T ss_pred             eeeecccccc----cCceeeEeHHHHHHhhhhhccceeeceeccccccCCchhhhhhhhhcccccccccccccchhhccc
Confidence            4577999999    8999999999999988888999999999999999999999887422     00             


Q ss_pred             -CC-----------CcCCCCcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        124 -RT-----------APKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       124 -~~-----------~~~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                       .+           .+.+.....|.+.|.|.+++++||.|+.||+|.++.. +.+|||.+.+|.-+.+++.+
T Consensus        80 ~n~l~~~q~v~rtn~~~q~~~r~c~v~f~Y~pqndDELelkVGDiIeli~e-VEeGWw~G~Lngk~GmFPsN  150 (627)
T KOG4348|consen   80 RNPLTVHQQVERTNPPPQPQARICVVTFAYSPQNDDELELKVGDIIELISE-VEEGWWKGKLNGKVGMFPSN  150 (627)
T ss_pred             CCCccccCcccccCCCCCccceeEEEEEeecCCCCceeeeeeccHHHhhhH-hhhhhhhceecCcccccchh
Confidence             00           0011233569999999999999999999999999987 99999998888888777653

>KOG1029|consensus

Probab=99.55  E-value=2.4e-15  Score=138.55  Aligned_cols=122  Identities=25%  Similarity=0.330  Sum_probs=98.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEE--ecCCCeEEEEECCeEEEeeCCcEEeecCCCC----CC-------
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRR--QVDKNWYEGEHNAMIGLFPFNYVEIIPYDKI----RT-------  125 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~--~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~----~~-------  125 (225)
                      ..++||||.|.++    +.+|++|..||||.|-.  ...+||.-|+++|+.||||.|||+.++....    .+       
T Consensus       693 ~vkyrAly~FeaR----s~dEisf~pGDII~V~esq~aEPGWlaGel~gktGWFPenyvEki~~~e~p~~v~Pv~~l~~~  768 (1118)
T KOG1029|consen  693 TVKYRALYPFEAR----SHDEISFEPGDIIIVFESQAAEPGWLAGELRGKTGWFPENYVEKIPAVETPGGVPPVQNLPPT  768 (1118)
T ss_pred             eEEEeeecccccC----CcccccccCCCEEEEehhccCCcccccceeccccCcCcHHHHhhcccCCCCCCCCchhcCCCC
Confidence            4568999999999    89999999999998875  3568999999999999999999998853321    00       


Q ss_pred             -------------------------Cc--------CCCCcC-----cEEEcccccCCCccccccccccceEEeccccccc
Q psy15850        126 -------------------------AP--------KKLSEG-----QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQ  167 (225)
Q Consensus       126 -------------------------~~--------~~~~~~-----~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~  167 (225)
                                               .+        ..+..+     .|+|+|.+.+..+..|+|.+||+|+||+.  .+-
T Consensus       769 ~~psas~nq~a~~ad~~~~~~n~~~~t~~aA~p~~tapg~~eve~lq~iA~y~wrakke~dLsFskgd~I~Vlek--qem  846 (1118)
T KOG1029|consen  769 MTPSASVNQIAVVADTKNESANAMGLTEGAAPPALTAPGQGEVEILQAIALYPWRAKKENDLSFSKGDTITVLEK--QEM  846 (1118)
T ss_pred             CCcccccccceeecccccchhhccCCCCCCCCccccCCCchhhhhhhHHhhccccccccccccccCCCeeeeehh--ccc
Confidence                                     00        000011     47899999999999999999999999985  567


Q ss_pred             ccccchhhhhhccchhHHH
Q psy15850        168 YRRPVRNEIKELISEEELA  186 (225)
Q Consensus       168 ~~f~~~~~l~e~~~~~e~~  186 (225)
                      |||+....-+.|++++.+-
T Consensus       847 wW~G~v~g~~GwFPksYVk  865 (1118)
T KOG1029|consen  847 WWFGEVAGEIGWFPKSYVK  865 (1118)
T ss_pred             eecccccCccCcCcHHhhh
Confidence            9999988999999886654

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.52  E-value=3.2e-14  Score=92.33  Aligned_cols=54  Identities=44%  Similarity=0.742  Sum_probs=47.9

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEE-EecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVR-RQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~-~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      +++|++||.+.    ..++|+|++||+|.|+ ++.+++||.|+.+|+.||||++||+++
T Consensus         1 ~~~a~~d~~~~----~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~~g~~G~~P~~~v~~~   55 (55)
T PF07653_consen    1 YYRAIFDYVAE----DPDELSFKKGDVIEVLGEKDDDGWWLGENNGRRGWFPSSYVEEI   55 (55)
T ss_dssp             EEEESSSBESS----STTB-EB-TTEEEEEEEEECSTSEEEEEETTEEEEEEGGGEEEH
T ss_pred             CEEEeEEECCC----CCCceEEecCCEEEEEEeecCCCEEEEEECCcEEEEcHHHEEEC
Confidence            47899999998    7889999999999999 888889999999999999999999863

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>KOG2199|consensus

Probab=99.45  E-value=1.4e-14  Score=125.25  Aligned_cols=148  Identities=24%  Similarity=0.309  Sum_probs=86.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec-CCCCCCCcCCCCcCcEEE
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP-YDKIRTAPKKLSEGQARA  137 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~-~~~~~~~~~~~~~~~~~a  137 (225)
                      .+.|||||||++.    ..+||+|++||||.|++..+.+||+|++.+..|+||+|||...- ...............+++
T Consensus       215 ~rkVRALYDFeAa----E~nELsFkaGdIItVLd~s~~~WWKG~~~~~~GlFPsnfVT~~le~~~~ee~~~~~~~~E~~v  290 (462)
T KOG2199|consen  215 VRKVRALYDFEAA----EDNELSFKAGDIITVLDDSDPNWWKGENHRGIGLFPSNFVTADLEEPKIEEQEQKQKNKEAIV  290 (462)
T ss_pred             chhhhhhhccccc----CCCccceecCcEEEEcccCCcchhccccCCcccccchhhhhhhhcccchhhhhhhhcCcceee
Confidence            4458999999999    68899999999999999999999999999999999999998753 211111110000011111


Q ss_pred             cccccCCCccccccc-cccce-EEeccc---ccccccccchhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy15850        138 KFNFVAQTHLELSLV-KESPH-KYVDSE---VTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDI  212 (225)
Q Consensus       138 ~~~~~~~~~~els~~-~g~~v-~~~~~~---~~~~~~f~~~~~l~e~~~~~e~~~~~~~~l~~~~~~~~~~~~lq~l~D~  212 (225)
                      ..+. +.-+..|-+. .-+.- ...+.+   ..++-.-...+.+...+.+  +.|.+.+++.....+.--...++.|++.
T Consensus       291 fi~e-~~iDrlL~~L~~~dPtd~~~D~~~l~~le~~~~~mgPlid~~Le~--idrk~~eL~~Ln~~l~~Al~lY~kLm~~  367 (462)
T KOG2199|consen  291 FIDE-DKIDRLLQVLHEADPTDEVQDDDDLLDLEAAVHQMGPLIDRKLEK--IDRKHEELSQLNVKLLDALRLYNKLMNE  367 (462)
T ss_pred             eccH-HHHHHHHHHHhhcCCCCccCCCHHHHHHHHHHHHhhhHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            1111 0000000000 00000 000000   0011112233334444433  7788888888888877777888888886


Q ss_pred             c
Q psy15850        213 S  213 (225)
Q Consensus       213 ~  213 (225)
                      .
T Consensus       368 ~  368 (462)
T KOG2199|consen  368 A  368 (462)
T ss_pred             C
Confidence            6

>KOG2070|consensus

Probab=99.38  E-value=1.5e-13  Score=121.64  Aligned_cols=60  Identities=35%  Similarity=0.578  Sum_probs=55.3

Q ss_pred             cccceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         56 ERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        56 ~~~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      ...+-.++|-|.|...    +.|||+|.+||+|.|+...+.|||+|.++|++||||+|||..+.
T Consensus        14 s~~pLvvrAkf~F~gs----NnDELsf~KgDvItVTq~eeGGWWEGTlng~TGWFPsnYV~eik   73 (661)
T KOG2070|consen   14 SNNPLVVRAKFNFQGS----NNDELSFSKGDVITVTQVEEGGWWEGTLNGRTGWFPSNYVREIK   73 (661)
T ss_pred             CCCceEEEEEeecccC----CCceeccccCCEEEEEEeccCcceeccccCccCccchHHHHHHh
Confidence            3345568999999999    89999999999999999999999999999999999999999876

>KOG3601|consensus

Probab=99.36  E-value=1.7e-14  Score=115.36  Aligned_cols=149  Identities=19%  Similarity=0.187  Sum_probs=120.1

Q ss_pred             EEeecccCCCCCCCCccccccCCCeEEEEEecCC-CeEEEEECCeEEEeeCCcEEeecCCCCCCCc---------CCCCc
Q psy15850         63 QELHDISSRRHTDNFTELSFKKGDIIFVRRQVDK-NWYEGEHNAMIGLFPFNYVEIIPYDKIRTAP---------KKLSE  132 (225)
Q Consensus        63 ~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~-~Ww~g~~~g~~G~~P~nyv~~~~~~~~~~~~---------~~~~~  132 (225)
                      .+++||.+.    ..+||+|.+||.+.+++..+. +|...+++|..|++|.||.+...+.|+...-         .....
T Consensus         4 ~a~n~f~a~----i~dELsFlkg~~lk~l~~~d~~nw~~ael~g~~g~~P~Nai~~~~~~wve~~i~r~~ae~~l~~~~~   79 (222)
T KOG3601|consen    4 VAKNDFLAG----IRDELSFLKGDNLKILNMEDDINWYKAELDGPEGFIPKNAIRMKPHEWVEGLIPRPLAEDLLSKKRD   79 (222)
T ss_pred             hhhhhhhhc----CcccceeecCCceEecchHHhhhhhhHhhcCccccCcccccccccccceecccccchhhhhhhccCc
Confidence            478899998    789999999999998886554 8999999999999999999887777763211         22467


Q ss_pred             CcEEEcccccCCCccccccccccceEEeccc--ccc---ccc--ccchhhhhhccchhHHHHHHHHHHHHHHH----HH-
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSE--VTL---QYR--RPVRNEIKELISEEELARRQAEAMRRIYQ----EE-  200 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~--~~~---~~~--f~~~~~l~e~~~~~e~~~~~~~~l~~~~~----~~-  200 (225)
                      |.++.+.+..+.++++++++.++.|..+.-.  ..+   .|-  |+++|+++.|++.++..+.+++++++++.    +. 
T Consensus        80 G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~rt~s~~r~~qi~l~d~~~~~~~~~~  159 (222)
T KOG3601|consen   80 GDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHRTASQSRNQQIFLRDMEPPPAPLPP  159 (222)
T ss_pred             chhhhhhhhcCcccccccccCCCCceeccccccCccccccchhhccCCCCCcccCcccccccceeeeecccccccccCCC
Confidence            8899999999999999999999998554321  112   232  89999999999999999999999999983    11 


Q ss_pred             -HHHHHHHHHhhhccC
Q psy15850        201 -RRRKYLQELHDISSR  215 (225)
Q Consensus       201 -~~~~~lq~l~D~~~~  215 (225)
                       -...|.|+++||...
T Consensus       160 ~~~~~yqQa~~df~~~  175 (222)
T KOG3601|consen  160 APTNYYQQALYDFQPQ  175 (222)
T ss_pred             CccchhhhhcCCCCCC
Confidence             245788999998753

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.32  E-value=4e-12  Score=80.05  Aligned_cols=46  Identities=37%  Similarity=0.592  Sum_probs=41.6

Q ss_pred             EEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC--CeEEEeeC
Q psy15850         63 QELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPF  112 (225)
Q Consensus        63 ~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~--g~~G~~P~  112 (225)
                      +|+|||.+.    ..+||+|++||+|.|+++.+.+||.|+..  ++.||||+
T Consensus         1 ~Alydf~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~   48 (48)
T PF00018_consen    1 RALYDFDAE----DPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS   48 (48)
T ss_dssp             EESSCBETS----STTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred             CCCeeeCCC----CCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence            599999999    78999999999999999999999999964  69999995

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>KOG1118|consensus

Probab=99.32  E-value=4.7e-13  Score=112.41  Aligned_cols=56  Identities=45%  Similarity=0.834  Sum_probs=53.2

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      ..|||+|||+++    +..||.|++||+|.|+...|.+||.|+..|..|+||.|||+.+-
T Consensus       307 p~cralYdFepe----nEgEL~fkeGDlI~l~~QIdenWyeG~~~g~sG~FPvnYv~vlv  362 (366)
T KOG1118|consen  307 PCCRALYDFEPE----NEGELDFKEGDLITLTNQIDENWYEGEKHGESGMFPVNYVEVLV  362 (366)
T ss_pred             hhheeeeccCCC----CCCccCcccCceeeehhhcCcchhhheecCccCccccceeEEec
Confidence            458999999999    89999999999999999999999999999999999999999874

>smart00326 SH3 Src homology 3 domains

Probab=99.25  E-value=1.9e-11  Score=78.88  Aligned_cols=54  Identities=44%  Similarity=0.722  Sum_probs=49.2

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC-CeEEEeeCCcEEe
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN-AMIGLFPFNYVEI  117 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~-g~~G~~P~nyv~~  117 (225)
                      ..++|+|||.+.    ..++|+|++||+|.++...+.+||.++.. ++.||||.+|++.
T Consensus         3 ~~~~a~~~~~~~----~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~   57 (58)
T smart00326        3 PQVRALYDYTAQ----DPDELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVEE   57 (58)
T ss_pred             cEEEEeeeeCCC----CCCCCCCCCCCEEEEEEcCCCCeEEEEeCCCCEEEEchHHEEE
Confidence            357899999998    78899999999999999888999999976 9999999999975

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>KOG4226|consensus

Probab=99.25  E-value=9.7e-12  Score=103.16  Aligned_cols=128  Identities=23%  Similarity=0.284  Sum_probs=99.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecCCCC---------------
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPYDKI---------------  123 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~~~~---------------  123 (225)
                      +++.|-|||.++    ...||.+++.+.+.+++. ...||+.+ ...+.|++|+|||+.......               
T Consensus         5 ~~vvak~dy~aq----~~qeldikkner~~lldd-sk~wwrvrns~n~tgyvpsnyverkn~~~~~si~knlkd~~g~kt   79 (379)
T KOG4226|consen    5 VIVVAKWDYTAQ----QDQELDIKKNERLWLLDD-SKTWWRVRNSANRTGYVPSNYVERKNSLKKGSIVKNLKDTLGLKT   79 (379)
T ss_pred             EEEEEEechhcc----cchhccccccceEEEEcC-CccceeeecccccCCcccchhhhcccchhhhHHHHhhhhcccccc
Confidence            568899999999    678999999999988864 45799998 567899999999986532111               


Q ss_pred             C---------CCcCC----C------CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchhH
Q psy15850        124 R---------TAPKK----L------SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEE  184 (225)
Q Consensus       124 ~---------~~~~~----~------~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~e  184 (225)
                      .         +.|.-    +      ..-.+.+.|.|.++-++||++.+|+.|.++++ -.+|||.++-|.-+.|++.+.
T Consensus        80 ~~k~s~~~~~~sp~~d~~~ppd~~~~~~t~AvVKf~Y~a~~eDELsLtKGtrv~vmEK-ssDGWWrG~~ng~VGWFPSNY  158 (379)
T KOG4226|consen   80 RRKTSARDASPSPSTDAEYPPDRIYDLNTPAVVKFNYVAEREDELSLTKGTRVTVMEK-SSDGWWRGSYNGQVGWFPSNY  158 (379)
T ss_pred             ccCCCccccCCCCCccccCCcchhhhcCCceEEEEeeccccccccccccCcEEEEEEe-ccCcceecccCCeeccccccc
Confidence            0         00000    0      11237889999999999999999999999988 788999988899999999877


Q ss_pred             HHHHHHHHH
Q psy15850        185 LARRQAEAM  193 (225)
Q Consensus       185 ~~~~~~~~l  193 (225)
                      +...-+.-.
T Consensus       159 v~E~~ds~~  167 (379)
T KOG4226|consen  159 VTEEVDSAA  167 (379)
T ss_pred             eehhccccc
Confidence            665544433

>KOG4792|consensus

Probab=99.22  E-value=4.4e-12  Score=102.57  Aligned_cols=117  Identities=21%  Similarity=0.332  Sum_probs=84.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecCCCC-----------CCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPYDKI-----------RTA  126 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~~~~-----------~~~  126 (225)
                      ..+++|+|||.+.    +.++|.|++|+++.|+++.+..||.++ ..|+.|++|.+||+.......           ...
T Consensus       124 ~~~vr~~fdF~G~----deeDLPFkkGeiL~I~~K~eeqWW~Arns~Gk~GmIPvpYVe~~~~~~~~~~~~~~ga~e~si  199 (293)
T KOG4792|consen  124 AEYVRALFDFNGN----DEEDLPFKKGEILRIRDKPEEQWWNARNSEGKRGMIPVPYVEKYRPASASVSALIGGASESSI  199 (293)
T ss_pred             hhheeeeeccCCC----ccccCCcccCcEEEEecCcHHHhhhhhccCCcccceechHHHhhhhhhcccccccCCcccccC
Confidence            4578999999999    789999999999999999999999999 789999999999997642210           000


Q ss_pred             cCC--------------------CCc--CcEEEcccc--cCCCccccccccccceEEecccccccccccchhhhhhcc
Q psy15850        127 PKK--------------------LSE--GQARAKFNF--VAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELI  180 (225)
Q Consensus       127 ~~~--------------------~~~--~~~~a~~~~--~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~  180 (225)
                      ++.                    ...  ..+++..+-  ++.+...|.++.|++|+|-...+++.|- +.+|.-+.++
T Consensus       200 ~q~~~g~e~~s~a~~s~~~~l~l~~~lPa~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ninGqwe-gElnGk~G~f  276 (293)
T KOG4792|consen  200 PQSGGGAERFSSASTSSDTPLPLQQNLPAYARVIQKRVPNAYDKTALALEVGDIVKVTKKNINGQWE-GELNGKIGHF  276 (293)
T ss_pred             CCCCCCCCCCCCCCcccCCcCccccCCChheeeehhcCCCccChhhhhhhcCcEEEEEeeccCceee-eeecCccccc
Confidence            000                    011  123444433  3557777999999999999987776664 3444444443

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=99.20  E-value=3.9e-11  Score=76.37  Aligned_cols=51  Identities=51%  Similarity=0.796  Sum_probs=46.6

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECC-eEEEeeCCcEE
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNA-MIGLFPFNYVE  116 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g-~~G~~P~nyv~  116 (225)
                      ++|+|+|.+.    ..++|+|.+||++.++...+.+||.++..+ +.||||.+|++
T Consensus         2 ~~a~~~~~~~----~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~   53 (54)
T cd00174           2 VRALYDYDAR----DPDELSFKKGDIIEVLEKSDDGWWEGRLLGGKRGLFPSNYVE   53 (54)
T ss_pred             EEEEEeeCCC----CCCCCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEccccCc
Confidence            5799999999    788999999999999998888999999766 99999999985

>KOG4225|consensus

Probab=99.15  E-value=4e-11  Score=105.10  Aligned_cols=104  Identities=29%  Similarity=0.445  Sum_probs=84.1

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC--CeEEEeeCCcEEeecCCCC----------------
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPFNYVEIIPYDKI----------------  123 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~--g~~G~~P~nyv~~~~~~~~----------------  123 (225)
                      ++|.|+|.+.    ...||++++|+.|.++...+.+|++|...  ++.|+||.+||+.+.....                
T Consensus       307 a~A~y~F~~~----s~~Els~~kge~v~L~r~vd~nw~eG~i~g~~rqgifP~SyVev~~~~~~~~~~~~~~~p~~p~~s  382 (489)
T KOG4225|consen  307 AIAKYNFNAD----SPVELSLRKGERVTLTRQVDENWYEGKIPGTNRQGIFPASYVEVIKSPKLELPLDYPDLPIPPRSS  382 (489)
T ss_pred             ccccCCCCCC----CchhcccccCceEEEEEeccCceeeccccccccccccchhHhhhhhccccccccccCCCCCCcccc
Confidence            6899999999    78899999999999999999999999965  7899999999998743211                


Q ss_pred             ----------------------CCCc-----CC--------------CCcCcEEEcccccCCCccccccccccceEEecc
Q psy15850        124 ----------------------RTAP-----KK--------------LSEGQARAKFNFVAQTHLELSLVKESPHKYVDS  162 (225)
Q Consensus       124 ----------------------~~~~-----~~--------------~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~  162 (225)
                                            ...+     .+              ...-.+.|+|+|.+++++||.|.+||+|.|+++
T Consensus       383 ~~~~~~~~~s~~~~~~~~~t~~~~q~~~n~~qepr~~~~~~~~~qt~~~~l~yrAly~Y~pqnedeLEl~egDii~VmeK  462 (489)
T KOG4225|consen  383 NELRPLSEDSMKNAWPQTHTQSSTQPPENFPQEPRVTEKNDAHSQTSSEPLKYRALYSYRPQNEDELELREGDIIDVMEK  462 (489)
T ss_pred             hhhcccccchhhhcccccccccccCCCCCcccccccccccCcccCCCCCcccceeccccCCCCchhheeccCCEEeeeec
Confidence                                  0000     00              011236999999999999999999999999998


Q ss_pred             cccccccc
Q psy15850        163 EVTLQYRR  170 (225)
Q Consensus       163 ~~~~~~~f  170 (225)
                       .++||.-
T Consensus       463 -cddgWfv  469 (489)
T KOG4225|consen  463 -CDDGWFV  469 (489)
T ss_pred             -ccCccee
Confidence             7778873

>KOG0162|consensus

Probab=99.15  E-value=9e-12  Score=114.88  Aligned_cols=54  Identities=43%  Similarity=0.655  Sum_probs=51.3

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEe
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI  117 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~  117 (225)
                      ..|.|+|||.++    +.+||+|++||+|.|+.++..|||.|+.+|+.||||.|||++
T Consensus      1052 p~~~A~Y~y~gq----~~dEls~~~~diIei~~edpSGWw~gk~~~keG~~P~~Yv~~ 1105 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQ----DVDELSFKKGDIIEIMREDPSGWWLGKLNGKEGLFPGNYVTE 1105 (1106)
T ss_pred             cceeeeccCCCC----CcccccccCCCEEEEeccCCCcchhhccCCcccccccccccc
Confidence            468999999999    899999999999999999999999999999999999999975

>KOG2996|consensus

Probab=99.14  E-value=1.3e-11  Score=111.36  Aligned_cols=90  Identities=26%  Similarity=0.455  Sum_probs=64.3

Q ss_pred             ccccCccccccCCCCcCccccCCCHHHHHHHHHHHHHhhhhhcccceEEEEeecccCCCCCCCCccccccCCCeEEEEEe
Q psy15850         14 SIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ   93 (225)
Q Consensus        14 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~   93 (225)
                      +.+++.+..||++|..+....+           .........+.+.-.+.|-|||.++    +..||||++||+|.|..+
T Consensus       771 k~LDTtLk~Pyke~e~sa~~~~-----------~~~~~sv~s~~~~g~AvarYdf~ar----d~~eLSlk~GDvV~i~~k  835 (865)
T KOG2996|consen  771 KALDTTLKFPYKEPEHSAGQRG-----------NRAGNSVLSPKVVGTAVARYDFCAR----DMRELSLKEGDVVKIYDK  835 (865)
T ss_pred             HHhhhhhcCCCcChhhhhhhcc-----------ccccccccCcceeeeeeeccccCCC----chhhcccccCCEEEEehh
Confidence            4566677778877755444311           1111112222333346788999999    788999999999998875


Q ss_pred             c--CCCeEEEEECCeEEEeeCCcEEee
Q psy15850         94 V--DKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        94 ~--~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .  |.|||+|+.+|+.||||++||++-
T Consensus       836 ~g~d~GWWkGevngrvGwFPstYVee~  862 (865)
T KOG2996|consen  836 VGEDQGWWKGEVNGRVGWFPSTYVEED  862 (865)
T ss_pred             ccccCceecceecCccccccccccccc
Confidence            3  579999999999999999999874

>KOG1264|consensus

Probab=99.12  E-value=1.2e-10  Score=108.71  Aligned_cols=149  Identities=20%  Similarity=0.238  Sum_probs=94.0

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCe-EEEeeCCcEEeecCCCCCCCcC-----CCCcC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAM-IGLFPFNYVEIIPYDKIRTAPK-----KLSEG  133 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~-~G~~P~nyv~~~~~~~~~~~~~-----~~~~~  133 (225)
                      +.|+|||||.+.    .++||||.+|-||.++.+...+||.|..+|+ .+|||+|||+.+..+.......     .+...
T Consensus       775 vt~kAL~~Yka~----r~DELSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGt  850 (1267)
T KOG1264|consen  775 VTVKALYDYKAK----RSDELSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGT  850 (1267)
T ss_pred             hhhhhhhccccC----CcccccccccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccch
Confidence            458999999999    7899999999999999999999999999875 8999999999987654422211     11122


Q ss_pred             cEEEcccccCCCccccccccccceEEeccc--cccccc----ccchhhhhhccchh-HHHHHHHHHHHHHHHHHHHHHHH
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSE--VTLQYR----RPVRNEIKELISEE-ELARRQAEAMRRIYQEERRRKYL  206 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~--~~~~~~----f~~~~~l~e~~~~~-e~~~~~~~~l~~~~~~~~~~~~l  206 (225)
                      .+....+....+....+..+++..-++..+  +...|-    +.+..++-+|+..= +++..-.-.+..+---+++.++.
T Consensus       851 l~rgi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA  930 (1267)
T KOG1264|consen  851 LCRGILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIA  930 (1267)
T ss_pred             hhhccccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence            233345555555555555565554444332  222222    46667777776542 33333333333222233556666


Q ss_pred             HHHhhh
Q psy15850        207 QELHDI  212 (225)
Q Consensus       207 q~l~D~  212 (225)
                      .+|-|+
T Consensus       931 ~ElSdL  936 (1267)
T KOG1264|consen  931 IELSDL  936 (1267)
T ss_pred             HHhhce
Confidence            666554

>KOG3632|consensus

Probab=99.01  E-value=4.7e-10  Score=106.31  Aligned_cols=123  Identities=24%  Similarity=0.248  Sum_probs=92.1

Q ss_pred             eEEEEeecccCCCCCCCC----ccccccCCCeEEEEE-ecCCCeEEEEECCeEEEeeCCcEEeecCCCC----------C
Q psy15850         60 KYLQELHDISSRRHTDNF----TELSFKKGDIIFVRR-QVDKNWYEGEHNAMIGLFPFNYVEIIPYDKI----------R  124 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~----~eLs~~~Gdii~v~~-~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~----------~  124 (225)
                      ....|+|||++...++|.    .||+|++|+||.|.. ++.+|++.|+++|+.|+||+|+|.++.....          .
T Consensus      1139 rifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~ngr~GlIPcNmvae~~vd~eq~~~r~rqG~l 1218 (1335)
T KOG3632|consen 1139 RIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGELNGRRGLIPCNMVAEQPVDNEQTDRRWRQGLL 1218 (1335)
T ss_pred             eeeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeecccccccccccccccccccCCcHHHHHHHHhccC
Confidence            345699999998766654    499999999999885 6778999999999999999999998754331          0


Q ss_pred             CCc----------------C--CCCcCcEEEcccccCC-------CccccccccccceEEecccccccccccchhhhhhc
Q psy15850        125 TAP----------------K--KLSEGQARAKFNFVAQ-------THLELSLVKESPHKYVDSEVTLQYRRPVRNEIKEL  179 (225)
Q Consensus       125 ~~~----------------~--~~~~~~~~a~~~~~~~-------~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~  179 (225)
                      +..                .  +.....++|.++|.++       ++.+|.|+.||+|.|+..-..+|+..+-+|.-+..
T Consensus      1219 Psv~~~e~~~gs~~s~g~~k~vp~~p~~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGelngqkgl 1298 (1335)
T KOG3632|consen 1219 PSVPTEEMRKGSAFSDGQQKMVPWPPRQMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGELNGQKGL 1298 (1335)
T ss_pred             CCCCchhhhcccccCCCCccccCCchhhhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCcccccccCCccCc
Confidence            000                0  0122257888999875       56789999999999999866677776666665555


Q ss_pred             cch
Q psy15850        180 ISE  182 (225)
Q Consensus       180 ~~~  182 (225)
                      .+.
T Consensus      1299 vps 1301 (1335)
T KOG3632|consen 1299 VPS 1301 (1335)
T ss_pred             ccc
Confidence            544

>KOG2856|consensus

Probab=98.90  E-value=2.6e-10  Score=98.06  Aligned_cols=55  Identities=35%  Similarity=0.594  Sum_probs=48.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEE-ecCCCeEEEEEC-CeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRR-QVDKNWYEGEHN-AMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~-~~~~~Ww~g~~~-g~~G~~P~nyv~~~  118 (225)
                      +.++|||||.++    ..+||+|+.||.+..+. .+..||.+|+++ |+.|++|+|||+.+
T Consensus       415 v~vraLYDY~gq----E~DElsfkaGd~l~kl~eeDeqGWC~Grl~~G~vGLyPAnYVe~~  471 (472)
T KOG2856|consen  415 VRVRALYDYAGQ----EGDELSFKAGDELEKLEEEDEQGWCKGRLDSGRVGLYPANYVECI  471 (472)
T ss_pred             eeEEeeeccCcc----cccchhhccccHhhhcCCccccccccccccCCcccccchhhhhcc
Confidence            568999999999    78899999999998664 556699999987 99999999999865

>KOG2546|consensus

Probab=98.84  E-value=3.1e-09  Score=93.12  Aligned_cols=55  Identities=38%  Similarity=0.723  Sum_probs=51.8

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      +.++|||.+.    ..+||+|.+|-+|.|+++++++||+|-.+|.+|+||.|||+.+.+
T Consensus       426 Vv~iydy~~~----KddeLsf~E~ailyv~kknddgw~EgV~~~VTglFpgnyve~~~~  480 (483)
T KOG2546|consen  426 VVAIYDYTAD----KDDELSFAEGAILYVLKKNDDGWYEGVQDGVTGLFPGNYVEPLKA  480 (483)
T ss_pred             HHhhcccccc----cccccccccccEEEEEEecCCcchhheecCcceeccCcccccccc
Confidence            6799999999    899999999999999999999999999999999999999998753

>KOG4278|consensus

Probab=98.73  E-value=1.9e-08  Score=92.77  Aligned_cols=119  Identities=18%  Similarity=0.146  Sum_probs=91.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCC-CeEEEEE-CCeEEEeeCCcEEeec----CCCCC-CCc----
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDK-NWYEGEH-NAMIGLFPFNYVEIIP----YDKIR-TAP----  127 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~-~Ww~g~~-~g~~G~~P~nyv~~~~----~~~~~-~~~----  127 (225)
                      ++...|||||.+.    .+..|++.+|+.+.|+.-..+ .|.+++. +|+ ||||+||+.++.    +.|+- +..    
T Consensus        90 pNLFVALYDFvas----GdntLSitKGeklRvLGYN~NgEWcEartKNGq-GWVPSNyItPvNSLeKhsWYHGpvSRsaa  164 (1157)
T KOG4278|consen   90 PNLFVALYDFVAS----GDNTLSITKGEKLRVLGYNKNGEWCEARTKNGQ-GWVPSNYITPVNSLEKHSWYHGPVSRSAA  164 (1157)
T ss_pred             CceeEeeeeeecc----ccceeeeecCceEEEeeecCCCcceeecccCCC-ccccccccccccchhhcccccCccccchh
Confidence            4456799999999    788999999999999986544 5888884 555 999999998863    34441 111    


Q ss_pred             ----CCCCcCcEEEcccccCCCccccccccccceEEeccccc-c--ccc-----ccchhhhhhccch
Q psy15850        128 ----KKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-L--QYR-----RPVRNEIKELISE  182 (225)
Q Consensus       128 ----~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~--~~~-----f~~~~~l~e~~~~  182 (225)
                          ...-.|.|+++.+..+.+.+.+|++....|-+++.+.. .  -|.     |..+.||+.+|..
T Consensus       165 Ey~LsSgInGSFLVRESEsSpgQ~sISlRyeGRVyHYRINt~~dgK~yvt~EsrF~TLaELVHHHSt  231 (1157)
T KOG4278|consen  165 EYILSSGINGSFLVRESESSPGQYSISLRYEGRVYHYRINTDNDGKMYVTQESRFRTLAELVHHHST  231 (1157)
T ss_pred             hhhhhcCcccceEEeeccCCCcceeEEEEecceEEEEEeeccCCccEEEeehhhhhHHHHHHhhccc
Confidence                22356889999999999999999999888877765422 2  233     7888999988765

>KOG3601|consensus

Probab=98.65  E-value=1.1e-08  Score=82.38  Aligned_cols=59  Identities=27%  Similarity=0.445  Sum_probs=53.9

Q ss_pred             cccceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         56 ERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        56 ~~~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .....|++|+|||.+.    .+.+|.|++||.+.|+...+..||.|.+.|+.|+||++||...
T Consensus       160 ~~~~~yqQa~~df~~~----pp~ql~f~~gq~~~v~~~ss~~ww~Gs~lg~agiFpagyv~p~  218 (222)
T KOG3601|consen  160 APTNYYQQALYDFQPQ----PPGQLAFRRGQQIQVLDSSSPFWWFGSKLGRAGIFPAGYVAPS  218 (222)
T ss_pred             CccchhhhhcCCCCCC----CchhhccccCCcceeecCCCcchhhccccCceeeecCcccccc
Confidence            3567789999999999    6889999999999999999999999999999999999999654

>KOG0515|consensus

Probab=98.62  E-value=1.1e-08  Score=91.94  Aligned_cols=54  Identities=33%  Similarity=0.537  Sum_probs=48.8

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecC---CCeEEEEECCeEEEeeCCcEEeec
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD---KNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~---~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      +-|+|||.++    +.+||+|+.||.+.|+.++|   ..||.++++|++|+||.||+-..+
T Consensus       686 vYAlwdYeaq----f~DELsf~eGd~lTvirr~d~~eteWWwa~lng~eGyVPRnylgLyP  742 (752)
T KOG0515|consen  686 VYALWDYEAQ----FEDELSFDEGDELTVIRRDDEVETEWWWARLNGEEGYVPRNYLGLYP  742 (752)
T ss_pred             eEEeeccccc----ccccccccCCceeEEEecCCcchhhhhhHhhcCcccccchhhhhcCc
Confidence            6799999999    89999999999999998754   479999999999999999997764

>KOG3875|consensus

Probab=98.51  E-value=1.3e-08  Score=86.11  Aligned_cols=57  Identities=35%  Similarity=0.529  Sum_probs=48.3

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecC-----CCeEEEE-E-CCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD-----KNWYEGE-H-NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~-----~~Ww~g~-~-~g~~G~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++    ++.||+|++||++.|..+++     ..||... . ++..||||.|||+.+..
T Consensus       269 ~~arA~YdF~a~----np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r  332 (362)
T KOG3875|consen  269 EFARALYDFVAR----NPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR  332 (362)
T ss_pred             HHHHHHhhhhcC----CHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence            468999999999    78999999999999887654     4588877 4 56799999999999864

>KOG3655|consensus

Probab=98.51  E-value=2.4e-08  Score=88.79  Aligned_cols=54  Identities=41%  Similarity=0.702  Sum_probs=49.9

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~  118 (225)
                      .++|+|||.|.    +..|++|..+|+|.++...+.|||.|. .+|..|+||+|||+.+
T Consensus       429 ~A~A~~dyqAA----ddtEisf~p~d~it~Id~vdegww~g~~pdG~~glfPaNyV~li  483 (484)
T KOG3655|consen  429 TARALYDYQAA----DDTEISFDPPDAITLIDQVDEGWWTGQGPDGEVGLFPANYVELI  483 (484)
T ss_pred             Ccccccccccc----CCcccccCCccccccccccCCccccccCCCCCcCcccccccccC
Confidence            47899999999    788999999999999999999999999 5899999999999865

>KOG0197|consensus

Probab=98.51  E-value=8e-08  Score=86.64  Aligned_cols=121  Identities=19%  Similarity=0.215  Sum_probs=92.0

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCe-EEEEEecCCCeEEEE--ECCeEEEeeCCcEEeec----------CCCCC--
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDI-IFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIP----------YDKIR--  124 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdi-i~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~----------~~~~~--  124 (225)
                      ..+.|+|||.+.    ...+|+|.+||+ ..+++..+..||.++  ..+..|++|+|||....          .+|..  
T Consensus        12 ~~~valyd~~s~----~~~dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~~~~~~~~~l~~~~Wf~~~   87 (468)
T KOG0197|consen   12 TIVVALYDYASR----TPEDLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARNRGSPAFIKLSDEPWFFGK   87 (468)
T ss_pred             ceEEEeccccCC----CccccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeeccccCCCccccccCCchhcc
Confidence            357799999999    788999999999 668888888999988  36889999999998641          12220  


Q ss_pred             ---------CCcCCCCcCcEEEcccccCCCcccccccccc------ceEEeccc--cccc-c-------cccchhhhhhc
Q psy15850        125 ---------TAPKKLSEGQARAKFNFVAQTHLELSLVKES------PHKYVDSE--VTLQ-Y-------RRPVRNEIKEL  179 (225)
Q Consensus       125 ---------~~~~~~~~~~~~a~~~~~~~~~~els~~~g~------~v~~~~~~--~~~~-~-------~f~~~~~l~e~  179 (225)
                               -...+...|.++++-+....+++.+++..++      .|++++..  ..++ +       .|.++.+++.|
T Consensus        88 isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~~~~F~~l~~lv~~  167 (468)
T KOG0197|consen   88 ISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDERELFSSLQQLVNY  167 (468)
T ss_pred             ccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCHHHhhhhHHHHHhh
Confidence                     1113346688999999999999999999877      66666542  1222 3       18999999999


Q ss_pred             cchhH
Q psy15850        180 ISEEE  184 (225)
Q Consensus       180 ~~~~e  184 (225)
                      +...+
T Consensus       168 ~~~~~  172 (468)
T KOG0197|consen  168 YSKNA  172 (468)
T ss_pred             hhccC
Confidence            98764

>KOG1702|consensus

Probab=98.47  E-value=1.2e-07  Score=75.97  Aligned_cols=55  Identities=31%  Similarity=0.612  Sum_probs=49.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~  118 (225)
                      +..+|+|||.|+    +.+|++|.-||.|..+...++||..|.  .+|.+|..|+||++.+
T Consensus       208 ktyra~ydysaq----dedevsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~v  264 (264)
T KOG1702|consen  208 KTYRAFYDYSAQ----DEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEFV  264 (264)
T ss_pred             ccchhhccCccc----CcceeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheeeC
Confidence            346899999999    899999999999998888899999998  5899999999999863

>KOG1843|consensus

Probab=98.35  E-value=1.9e-07  Score=81.67  Aligned_cols=55  Identities=35%  Similarity=0.687  Sum_probs=48.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC--CCeEEEEECCeEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD--KNWYEGEHNAMIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~--~~Ww~g~~~g~~G~~P~nyv~~  117 (225)
                      .+.+.|+|+|..+    ...+|+|++||||.++.+.+  ..||.|+.++.+|+||.|||+.
T Consensus       416 ~n~a~a~ysfage----~~GDl~f~kgDii~il~ks~s~~dwwtgr~~~~egifPanyv~~  472 (473)
T KOG1843|consen  416 PNIATALYSFAGE----QPGDLSFQKGDIITILKKSDSANDWWTGRGNGYEGIFPANYVSL  472 (473)
T ss_pred             cceeeeeehhccC----CCCCcccccCceEEEecCCcchhhHHHhhccccccccccceecc
Confidence            4568899999999    67799999999999998765  4799999999999999999974

>KOG0609|consensus

Probab=98.31  E-value=2.4e-08  Score=90.20  Aligned_cols=61  Identities=23%  Similarity=0.456  Sum_probs=49.6

Q ss_pred             ceEEEEeecccCCCCCC---CCccccccCCCeEEEEEecCCCeEEEEEC-----CeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTD---NFTELSFKKGDIIFVRRQVDKNWYEGEHN-----AMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~---~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~-----g~~G~~P~nyv~~~~  119 (225)
                      ..+++|+|||++..+..   .+..|+|++|||+.|++++|.+||.++..     +..|++|+...+...
T Consensus       214 ~~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qerr  282 (542)
T KOG0609|consen  214 VVFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQERR  282 (542)
T ss_pred             eeeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHHHHH
Confidence            46899999999995433   23489999999999999999999999843     467999998776543

>KOG2996|consensus

Probab=98.27  E-value=6.6e-07  Score=81.56  Aligned_cols=123  Identities=16%  Similarity=0.224  Sum_probs=90.5

Q ss_pred             EeecccCCCCCCCC--ccccccCCCeEEEEEe-cCCCeEEEEE--CCeEEEeeCCcEEeecCCCCC----C---------
Q psy15850         64 ELHDISSRRHTDNF--TELSFKKGDIIFVRRQ-VDKNWYEGEH--NAMIGLFPFNYVEIIPYDKIR----T---------  125 (225)
Q Consensus        64 al~d~~~~~~~~~~--~eLs~~~Gdii~v~~~-~~~~Ww~g~~--~g~~G~~P~nyv~~~~~~~~~----~---------  125 (225)
                      ++-.|.+..+++..  .-|.++.||++.++.- ....||.|+.  .+..||||++-|.+.+...-+    +         
T Consensus       609 ~vq~ysg~p~Pag~igP~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~~~d~s~~~Wy  688 (865)
T KOG2996|consen  609 VVQNYSGIPPPAGSIGPRLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCPSVPRQQDYVPTDYSEFPWY  688 (865)
T ss_pred             hhhccCCCCCCCccCCCceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCCCCCCCCCCCccchhhhhhh
Confidence            44455555433322  4799999999987654 4568999995  456899999999876533210    0         


Q ss_pred             -----------CcCCCCcCcEEEcccccCCCccccccccccceEEeccccccccc-------ccchhhhhhccchhHHH
Q psy15850        126 -----------APKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYR-------RPVRNEIKELISEEELA  186 (225)
Q Consensus       126 -----------~~~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~-------f~~~~~l~e~~~~~e~~  186 (225)
                                 .-...+.|.+++++.-.....+.+|++..+.|+++..+.++||.       |.++-|||+||+.+++-
T Consensus       689 aG~MERaqaes~Lk~~~ngT~LVR~r~kea~e~AISikynnevKHikI~~~dg~~~i~E~k~F~sl~ELVeyYq~~sLk  767 (865)
T KOG2996|consen  689 AGEMERAQAESTLKNRPNGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETNDGKVHITEDKKFNSLVELVEYYQSHSLK  767 (865)
T ss_pred             cchHhhhhhhhHhhcCCCceEEEEecccchhheeEEEEeccccceEEEEecCCeEEechhhhhhhHHHHHHHHHhccHH
Confidence                       00123568899999988889999999999999888876667766       89999999999998753

>KOG2222|consensus

Probab=98.11  E-value=2.6e-07  Score=82.58  Aligned_cols=57  Identities=35%  Similarity=0.605  Sum_probs=51.6

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      +.++|+.||.-.    ..+||.|+++|+|.++..-+...|.|+++|.+||||+-||+.++.
T Consensus       549 krakal~df~r~----dddelgfrkndiitiisekdehcwvgelnglrgwfpakfvellde  605 (848)
T KOG2222|consen  549 KRAKALHDFARE----DDDELGFRKNDIITIISEKDEHCWVGELNGLRGWFPAKFVELLDE  605 (848)
T ss_pred             HHHHHHhhhhhc----cccccccccccEEEEeecCCcceeeeccccccccchHHHHHHHHh
Confidence            346899999888    788999999999999988889999999999999999999998864

>KOG3523|consensus

Probab=97.94  E-value=7.6e-07  Score=81.46  Aligned_cols=57  Identities=30%  Similarity=0.531  Sum_probs=51.4

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeecCC
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~~~  121 (225)
                      .+.+...|.+.    ..+||++..+|++.|+.+..+||++|+  .+|..||||..||+.|...
T Consensus       610 Qv~~~~sy~a~----q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~~  668 (695)
T KOG3523|consen  610 QVQCVHSYKAK----QPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITNP  668 (695)
T ss_pred             hhheeeccccC----CCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcCH
Confidence            36788889999    788999999999999999999999999  5899999999999998654

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=97.81  E-value=9.7e-06  Score=51.00  Aligned_cols=45  Identities=18%  Similarity=0.127  Sum_probs=35.0

Q ss_pred             EcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        137 AKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       137 a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      |+|+|.+..++||+|++||+|.++.. ..++||...++.-..+++.
T Consensus         1 Al~~y~~~~~dELs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~   45 (49)
T PF14604_consen    1 ALYDYEAQDPDELSFKKGDVITVLEK-SDDGWWYGRNTGRTGLFPA   45 (49)
T ss_dssp             ESSCBCSSSTTB-EB-TTEEEEEEEE-SSTSEEEEEETTEEEEEEG
T ss_pred             CCccCCCCCcCEeeEcCCCEEEEEEe-CCCCEEEEEECCEEEEECH
Confidence            68999999999999999999999966 6788887666665555554

...

>KOG4792|consensus

Probab=97.64  E-value=2.9e-05  Score=63.43  Aligned_cols=60  Identities=28%  Similarity=0.424  Sum_probs=49.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      +.+++++++-.+..  .+...|.+++||+|.|+.+.-+|-|+|+++|+.|.||..||+..+.
T Consensus       227 Pa~Arv~q~RVPnA--YDkTaL~levGdiVkVTk~ninGqwegElnGk~G~fPfThvrf~d~  286 (293)
T KOG4792|consen  227 PAYARVIQKRVPNA--YDKTALALEVGDIVKVTKKNINGQWEGELNGKIGHFPFTHVRFTDV  286 (293)
T ss_pred             ChheeeehhcCCCc--cChhhhhhhcCcEEEEEeeccCceeeeeecCccccccceeEEeecc
Confidence            44567777655441  1345899999999999999999999999999999999999998764

>KOG2528|consensus

Probab=97.63  E-value=2.9e-05  Score=69.00  Aligned_cols=59  Identities=29%  Similarity=0.531  Sum_probs=50.7

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEe-cCCCeEEEE-ECCeEEEeeCCcEEeecCCCC
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ-VDKNWYEGE-HNAMIGLFPFNYVEIIPYDKI  123 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~-~~g~~G~~P~nyv~~~~~~~~  123 (225)
                      .+||+|||...    +..||+...||++.+... ...+||.|. ..|..|+||..||+.+.....
T Consensus         4 k~RamyDf~~E----~~sElsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~~a~~   64 (490)
T KOG2528|consen    4 KARAMYDFQSE----GHSELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTRLAVA   64 (490)
T ss_pred             chhhhcchhhc----ccccccccccceeeecCcccccccccCCCccCccCCCcccceeeeccccc
Confidence            46899999999    788999999999998864 456999998 689999999999999875444

>KOG1451|consensus

Probab=97.60  E-value=3.7e-05  Score=70.45  Aligned_cols=54  Identities=33%  Similarity=0.565  Sum_probs=47.3

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEE-EEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIF-VRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~-v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .+.++|...+.    ...+++|..|.++. |.....+||..|+++|++|++|+|||+.+
T Consensus       758 k~k~lyAc~a~----h~selsf~~gt~f~nv~~S~e~Gwl~GtLnGktglip~nyve~l  812 (812)
T KOG1451|consen  758 RVKTLYACTAD----HHSELSFEPGTIFTNVYESNEDGWLVGTLNGKTGLIPSNYVEPL  812 (812)
T ss_pred             cccceeccCCC----CcccccccCcceeeeecccCCCCceeeecCCCcccCcccccCcC
Confidence            36788888888    67799999999997 55577889999999999999999999864

>KOG4773|consensus

Probab=97.60  E-value=7.6e-06  Score=70.51  Aligned_cols=55  Identities=22%  Similarity=0.449  Sum_probs=50.7

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      .+|++||...    ...||.|.+||++.++.+++.+||.|...|.+||+|.+|++.++.
T Consensus       178 ~~a~~df~gn----s~~EL~l~agdV~~~~~r~ek~W~~gk~R~~~g~yp~sF~~~ld~  232 (386)
T KOG4773|consen  178 AEASFDFPGN----SKLELNLVAGDVEFLLSRDEKYWLLGKVRGLTGYYPDSFVKQLDD  232 (386)
T ss_pred             HHhhccCCCC----ccceeeeehhhHHHHHhhcccceeeeeeccccccccHHhhhhhcc
Confidence            4788999988    788999999999999999999999999999999999999998853

>KOG3775|consensus

Probab=97.54  E-value=4e-05  Score=66.73  Aligned_cols=57  Identities=25%  Similarity=0.475  Sum_probs=51.3

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeecCCC
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIPYDK  122 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~~~~  122 (225)
                      -|+++.|.++    ..+||-+..||-|.|-...++.|.+|.  .+|+.|+||+.|+-.++...
T Consensus       265 HR~~~rFvPR----HpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~e  323 (482)
T KOG3775|consen  265 HRAVFRFVPR----HPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGPE  323 (482)
T ss_pred             hhhhhhccCC----CcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCch
Confidence            3799999999    899999999999999999999999998  68999999999998886543

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=97.47  E-value=6.9e-05  Score=48.14  Aligned_cols=49  Identities=20%  Similarity=0.170  Sum_probs=36.7

Q ss_pred             EEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        135 ARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       135 ~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ++|.++|.+....+|+|++||+|.++......+||....++-..+++.+
T Consensus         2 ~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~~g~~G~~P~~   50 (55)
T PF07653_consen    2 YRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWWLGENNGRRGWFPSS   50 (55)
T ss_dssp             EEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEEEEEETTEEEEEEGG
T ss_pred             EEEeEEECCCCCCceEEecCCEEEEEEeecCCCEEEEEECCcEEEEcHH
Confidence            6899999999999999999999999933355577876666666666654

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=97.43  E-value=9.8e-05  Score=46.01  Aligned_cols=34  Identities=24%  Similarity=0.271  Sum_probs=28.8

Q ss_pred             EEcccccCCCccccccccccceEEecccccccccc
Q psy15850        136 RAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR  170 (225)
Q Consensus       136 ~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f  170 (225)
                      +|+|+|.+...++|+|++||.+.++.. .+.+||.
T Consensus         1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~   34 (48)
T PF00018_consen    1 RALYDFDAEDPDELSFKKGDIIEVLEK-SDDGWWK   34 (48)
T ss_dssp             EESSCBETSSTTBSEB-TTEEEEEEEE-SSSSEEE
T ss_pred             CCCeeeCCCCCCEEeEECCCEEEEEEe-cCCCEEE
Confidence            589999999999999999999999987 4447775

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>KOG3632|consensus

Probab=97.35  E-value=0.00014  Score=70.19  Aligned_cols=61  Identities=31%  Similarity=0.454  Sum_probs=50.9

Q ss_pred             eEEEEeecccCCCCCCC---CccccccCCCeEEEEE-ecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDN---FTELSFKKGDIIFVRR-QVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~---~~eLs~~~Gdii~v~~-~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      +.+.|.|||.++.++.+   ..+|.|..||||.|.. .++++++.|+++|..|++|+|+++....
T Consensus      1245 ~~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGelngqkglvpsnfle~p~~ 1309 (1335)
T KOG3632|consen 1245 RQMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGELNGQKGLVPSNFLEAPNA 1309 (1335)
T ss_pred             hhhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCcccccccCCccCccccccccCCCc
Confidence            34669999999976653   3599999999999886 4567899999999999999999987643

>KOG3557|consensus

Probab=97.34  E-value=4.3e-05  Score=70.64  Aligned_cols=58  Identities=28%  Similarity=0.509  Sum_probs=50.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~~  121 (225)
                      .+++..+|||.++    +..||+..+||++.|+.. ..+||+++ ..|+.|++|+|.+..+...
T Consensus       500 ~k~~~~~Ydf~ar----Ns~ELsV~k~E~LEvl~d-~R~WW~~kn~~G~~GyvP~nIL~~~~~~  558 (721)
T KOG3557|consen  500 KKWVLVLYDFQAR----NSSELSVKKGEVLEVLDD-GRKWWKVKNGHGRAGYVPSNILAPLQPE  558 (721)
T ss_pred             ceeeeeehhhhcc----cchhhhhhhhhhhhhhhc-cccceeccCccCCCCCcchhhhccCCCc
Confidence            3478999999999    899999999999998875 45799998 6789999999999988644

>KOG4575|consensus

Probab=97.34  E-value=0.00023  Score=65.80  Aligned_cols=58  Identities=28%  Similarity=0.413  Sum_probs=47.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~~  120 (225)
                      ++.++|+|.+.++    ..++|.|-.||+|.++.-.+..||-+.+  ....|+||+|||..++.
T Consensus         8 p~~vrA~y~w~ge----~eGdl~f~egDlie~trI~dgkwwi~lhrNk~~~g~fpsNFvhcLd~   67 (874)
T KOG4575|consen    8 PCMVRALYAWPGE----REGDLKFTEGDLIEQTRIEDGKWWILLHRNKDEDGLFPSNFVHCLDK   67 (874)
T ss_pred             CceEEeeccCCCC----cccccceecccceeEEeeccceeeeeeeecccccccCcccceeeccc
Confidence            4668999999999    7889999999999999887766666654  34689999999977654

>KOG4429|consensus

Probab=97.26  E-value=0.00018  Score=60.94  Aligned_cols=53  Identities=15%  Similarity=0.047  Sum_probs=49.2

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      |.|+|.|.++    ..+||...+||++.+.++...+||.|++.|..|-||+.|++.+
T Consensus       366 cdafYSfqar----qddel~~e~gditif~Ekkeeg~~f~rl~gd~~hf~Aa~iEea  418 (421)
T KOG4429|consen  366 CDAFYSFQAR----QDDELGGEIGDITIFDEKKEEGPTFCRLLGDFEHFHAAEIEEA  418 (421)
T ss_pred             hhhhhccccc----cccccCCcccceeeecCcccCCCceeeeccccCCCcHHHHHHh
Confidence            6799999999    7889999999999999999999999999999999999998864

>KOG2199|consensus

Probab=97.23  E-value=0.00014  Score=63.96  Aligned_cols=51  Identities=18%  Similarity=0.162  Sum_probs=39.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ....++|+|||.+..+.||||++||+|+|++. ..-.||.+.+..-++.++.
T Consensus       214 ~~rkVRALYDFeAaE~nELsFkaGdIItVLd~-s~~~WWKG~~~~~~GlFPs  264 (462)
T KOG2199|consen  214 VVRKVRALYDFEAAEDNELSFKAGDIITVLDD-SDPNWWKGENHRGIGLFPS  264 (462)
T ss_pred             cchhhhhhhcccccCCCccceecCcEEEEccc-CCcchhccccCCcccccch
Confidence            44568999999999999999999999999998 6667775554444444443

>KOG3771|consensus

Probab=97.04  E-value=0.00024  Score=63.72  Aligned_cols=54  Identities=24%  Similarity=0.231  Sum_probs=44.0

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEEECCeEEEeeCCcEEe
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGEHNAMIGLFPFNYVEI  117 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~~~g~~G~~P~nyv~~  117 (225)
                      -.+.++|||.+.    +.++|+|+.||+|.|+... ...||.|++.|..+-+|.+|+..
T Consensus       401 ~~v~a~~dy~a~----~~deLsf~~gd~i~vi~s~~~~e~~eg~~mg~ke~~~~~~~~~  455 (460)
T KOG3771|consen  401 YKVKALHDYAAQ----DTDELSFEAGDVILVIPSDNPEEQDEGWLMGVKESDWNGLFPL  455 (460)
T ss_pred             cceecccccccc----ccccccccCCCEEEEecCCCccchhhHHHhhhcccccccceec
Confidence            348899999999    8999999999999988744 35799999888776666666643

>KOG2070|consensus

Probab=96.93  E-value=0.00073  Score=61.06  Aligned_cols=53  Identities=21%  Similarity=0.126  Sum_probs=45.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchhHHH
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEELA  186 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~e~~  186 (225)
                      -.+.|.|+|..-+.+||+|.+||+|+|-+. ..+|||.+.+|+.-.|++.+.+.
T Consensus        18 LvvrAkf~F~gsNnDELsf~KgDvItVTq~-eeGGWWEGTlng~TGWFPsnYV~   70 (661)
T KOG2070|consen   18 LVVRAKFNFQGSNNDELSFSKGDVITVTQV-EEGGWWEGTLNGRTGWFPSNYVR   70 (661)
T ss_pred             eEEEEEeecccCCCceeccccCCEEEEEEe-ccCcceeccccCccCccchHHHH
Confidence            357899999999999999999999999987 66899988888888888776543

>KOG3725|consensus

Probab=96.41  E-value=0.00071  Score=56.45  Aligned_cols=55  Identities=29%  Similarity=0.468  Sum_probs=47.8

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEe--cCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ--VDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~--~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      +.++.+|||++.    ...||++-..++|.|..-  .|..|.-|+.+++.|-+|..|++.+
T Consensus       318 rkArVlyDYdAa----~s~ElslladeiitVyslpGMD~dwlmgErGnkkGKvPvtYlELL  374 (375)
T KOG3725|consen  318 RKARVLYDYDAA----LSQELSLLADEIITVYSLPGMDADWLMGERGNKKGKVPVTYLELL  374 (375)
T ss_pred             cceeeeeccccc----chhhhhhhhcceEEEEecCCCChHHhhhhhcCCCCCcchhHHHhc
Confidence            447899999999    788999999999988753  4668999999999999999998764

>KOG1118|consensus

Probab=96.39  E-value=0.0012  Score=56.29  Aligned_cols=52  Identities=10%  Similarity=0.162  Sum_probs=42.0

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .+..|.|+|+|.+.++.||.|++||+|++... ++++||-+..++--.+++.+
T Consensus       305 ~~p~cralYdFepenEgEL~fkeGDlI~l~~Q-IdenWyeG~~~g~sG~FPvn  356 (366)
T KOG1118|consen  305 DQPCCRALYDFEPENEGELDFKEGDLITLTNQ-IDENWYEGEKHGESGMFPVN  356 (366)
T ss_pred             cchhheeeeccCCCCCCccCcccCceeeehhh-cCcchhhheecCccCccccc
Confidence            45678999999999999999999999999987 88899866655544444443

>KOG0162|consensus

Probab=96.38  E-value=0.0033  Score=59.47  Aligned_cols=52  Identities=15%  Similarity=0.084  Sum_probs=43.8

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....|.|+|+|.+++.+||+|++||+|.++.+ ...|||-+.++.-..|++.+
T Consensus      1050 k~p~~~A~Y~y~gq~~dEls~~~~diIei~~e-dpSGWw~gk~~~keG~~P~~ 1101 (1106)
T KOG0162|consen 1050 KNPVCEALYDYPGQDVDELSFKKGDIIEIMRE-DPSGWWLGKLNGKEGLFPGN 1101 (1106)
T ss_pred             CCcceeeeccCCCCCcccccccCCCEEEEecc-CCCcchhhccCCcccccccc
Confidence            44689999999999999999999999999987 56688877777777776653

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=96.29  E-value=0.0029  Score=39.32  Aligned_cols=36  Identities=19%  Similarity=0.202  Sum_probs=30.8

Q ss_pred             EEEcccccCCCccccccccccceEEeccccccccccc
Q psy15850        135 ARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP  171 (225)
Q Consensus       135 ~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~  171 (225)
                      ++++++|.+....+|+|.+|+.+.++.. ...+||..
T Consensus         2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~-~~~~w~~~   37 (54)
T cd00174           2 VRALYDYDARDPDELSFKKGDIIEVLEK-SDDGWWEG   37 (54)
T ss_pred             EEEEEeeCCCCCCCCCCCCCCEEEEEEc-CCCCeEEE
Confidence            5789999999999999999999999987 45667643

>smart00326 SH3 Src homology 3 domains

Probab=96.28  E-value=0.0036  Score=39.39  Aligned_cols=48  Identities=21%  Similarity=0.198  Sum_probs=36.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchh-hhhhccc
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN-EIKELIS  181 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~-~l~e~~~  181 (225)
                      ..++|+++|.+....+|+|.+||.|.++... ..+||..... ....+++
T Consensus         3 ~~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~-~~~w~~~~~~~~~~G~vP   51 (58)
T smart00326        3 PQVRALYDYTAQDPDELSFKKGDIITVLEKS-DDGWWKGRLGRGKEGLFP   51 (58)
T ss_pred             cEEEEeeeeCCCCCCCCCCCCCCEEEEEEcC-CCCeEEEEeCCCCEEEEc
Confidence            3578999999999999999999999999874 6677754333 3344443

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>KOG0515|consensus

Probab=96.26  E-value=0.0027  Score=58.00  Aligned_cols=53  Identities=17%  Similarity=0.144  Sum_probs=42.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccc---ccccccccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSE---VTLQYRRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~---~~~~~~f~~~~~l~e~~~~~e  184 (225)
                      ..|.+-|+++|.++.++||+|++||.++||+.+   ..+|||-. +|.-..|+..+-
T Consensus       682 N~G~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~-lng~eGyVPRny  737 (752)
T KOG0515|consen  682 NKGVVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWAR-LNGEEGYVPRNY  737 (752)
T ss_pred             ccceeEEeecccccccccccccCCceeEEEecCCcchhhhhhHh-hcCcccccchhh
Confidence            557889999999999999999999999999874   33566654 777777776643

>KOG2546|consensus

Probab=95.80  E-value=0.0016  Score=57.82  Aligned_cols=59  Identities=17%  Similarity=0.223  Sum_probs=48.8

Q ss_pred             eEEEeeCCcEEeecCCCCCCCcCCCCcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        106 MIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       106 ~~G~~P~nyv~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..||+|.+|+|.                 ..++|+|.+..++||+|.+|.++-++.+ .++||+.+..+..-.++..
T Consensus       414 sp~w~p~syLEk-----------------Vv~iydy~~~KddeLsf~E~ailyv~kk-nddgw~EgV~~~VTglFpg  472 (483)
T KOG2546|consen  414 SPAWVPTSYLEK-----------------VVAIYDYTADKDDELSFAEGAILYVLKK-NDDGWYEGVQDGVTGLFPG  472 (483)
T ss_pred             CcccccHHHHHH-----------------HHhhcccccccccccccccccEEEEEEe-cCCcchhheecCcceeccC
Confidence            367888888754                 4579999999999999999999988887 7789998887777666554

>KOG2856|consensus

Probab=95.75  E-value=0.0069  Score=53.01  Aligned_cols=52  Identities=15%  Similarity=0.127  Sum_probs=45.2

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchh-hhhhccchhH
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN-EIKELISEEE  184 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~-~l~e~~~~~e  184 (225)
                      ..++|+|||..+..+||+|+.||.++.+..+..+||..+-++ +-+.+|+-+.
T Consensus       415 v~vraLYDY~gqE~DElsfkaGd~l~kl~eeDeqGWC~Grl~~G~vGLyPAnY  467 (472)
T KOG2856|consen  415 VRVRALYDYAGQEGDELSFKAGDELEKLEEEDEQGWCKGRLDSGRVGLYPANY  467 (472)
T ss_pred             eeEEeeeccCcccccchhhccccHhhhcCCccccccccccccCCcccccchhh
Confidence            357899999999999999999999999999899999976655 7888887654

>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=95.63  E-value=0.037  Score=34.97  Aligned_cols=38  Identities=18%  Similarity=0.355  Sum_probs=31.0

Q ss_pred             cccccCCCeEEEEEecCCC-eEEE-EECCeEEEeeCCcEE
Q psy15850         79 ELSFKKGDIIFVRRQVDKN-WYEG-EHNAMIGLFPFNYVE  116 (225)
Q Consensus        79 eLs~~~Gdii~v~~~~~~~-Ww~g-~~~g~~G~~P~nyv~  116 (225)
                      --.+..|+.+.++.....+ |++. ..+|..||+++.||+
T Consensus        16 i~~l~~g~~v~v~~~~~~~~W~~V~~~~g~~GwV~~~~l~   55 (55)
T PF08239_consen   16 IGQLPKGEKVTVLGESGDGNWYKVRTYDGKTGWVSSSYLS   55 (55)
T ss_dssp             EEEEETTSEEEEEEEETT--EEEEEEETTEEEEEEGGCEE
T ss_pred             hEEEeCCCEEEEEEEcCCcEEEEEECcCCcEEEEEccccC
Confidence            3457899999999876655 9999 579999999999985

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.

>KOG3565|consensus

Probab=94.77  E-value=0.0072  Score=57.37  Aligned_cols=56  Identities=20%  Similarity=0.402  Sum_probs=48.0

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEE--ECCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGE--HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~--~~g~~G~~P~nyv~~~~  119 (225)
                      ..+.|+|.|.+.    +.+++++..|+++.+++.+ .+||=+++  .+|..|+||.+|++...
T Consensus       579 ~~~~a~~~~~~~----s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~~  637 (640)
T KOG3565|consen  579 RTSKALYAFEGQ----SEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVTE  637 (640)
T ss_pred             cceecccCcCCC----CCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCcccccccc
Confidence            457899999999    8899999999999988654 45898888  78899999999998753

>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A

Probab=94.55  E-value=0.054  Score=37.89  Aligned_cols=43  Identities=19%  Similarity=0.120  Sum_probs=29.7

Q ss_pred             CccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeec
Q psy15850         77 FTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        77 ~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~  119 (225)
                      .-+|.+++|+++.|+...+.+-|.++ ..|+-|+||.+++-..+
T Consensus        30 ~kDLpi~~GE~LeVI~~t~~~kvlCRN~~GKYGYV~~~~L~~~d   73 (89)
T PF14603_consen   30 GKDLPIKPGEILEVIQFTDDNKVLCRNSEGKYGYVLRSHLLPLD   73 (89)
T ss_dssp             TTB----TT-B-EEEEESSSSEEEEEETTTEEEEEEGGGS----
T ss_pred             cccCCcCCCCEEEEEEeCCCCeEEEeCCCCceeEEEHHHccCCC
Confidence            45899999999999999999988898 68999999999886554

>KOG0199|consensus

Probab=94.27  E-value=0.047  Score=52.18  Aligned_cols=50  Identities=28%  Similarity=0.294  Sum_probs=39.1

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecC-CCeEEEE--ECCeEEEeeCCcEEe
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD-KNWYEGE--HNAMIGLFPFNYVEI  117 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~-~~Ww~g~--~~g~~G~~P~nyv~~  117 (225)
                      +++.||+  .    ..+.|.|++||.|.|++... ..||+|.  .+++.|.||.+-|..
T Consensus       379 a~~~~d~--~----ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt~  431 (1039)
T KOG0199|consen  379 ARETYDS--I----EPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVTA  431 (1039)
T ss_pred             eeeeccc--c----CCCceeeccCCeEEEEecCCccceeeccccccceecccCcceeee
Confidence            4455554  3    45699999999999887544 5699996  678999999998874

>KOG1264|consensus

Probab=94.09  E-value=0.034  Score=53.47  Aligned_cols=52  Identities=17%  Similarity=0.190  Sum_probs=39.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccccccc-chhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP-VRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~-~~~~l~e~~~~~  183 (225)
                      ++..++|+|+|.+..++||||.+|.+|+.+.+ ..+|||.+ --..+..|++.+
T Consensus       773 ~~vt~kAL~~Yka~r~DELSFpk~aiItnv~k-eeg~wWrGdYGg~iq~wfPsn  825 (1267)
T KOG1264|consen  773 PQVTVKALYDYKAKRSDELSFPKGAIITNVSK-EEGGWWRGDYGGRIQQWFPSN  825 (1267)
T ss_pred             cchhhhhhhccccCCcccccccccceeEeeec-cCCceeecccccceeeeccHH
Confidence            45678999999999999999999999999998 45556632 222444555543

>smart00287 SH3b Bacterial SH3 domain homologues

Probab=93.53  E-value=0.17  Score=32.74  Aligned_cols=37  Identities=24%  Similarity=0.230  Sum_probs=29.8

Q ss_pred             cccccCCCeEEEEEecCCCeEEEEEC-CeEEEeeCCcE
Q psy15850         79 ELSFKKGDIIFVRRQVDKNWYEGEHN-AMIGLFPFNYV  115 (225)
Q Consensus        79 eLs~~~Gdii~v~~~~~~~Ww~g~~~-g~~G~~P~nyv  115 (225)
                      --.+..|+.+.++.....+|.+.+.. |..||++..++
T Consensus        24 ~~~l~~g~~v~i~~~~~~~W~~v~~~~g~~Gwi~~~~~   61 (63)
T smart00287       24 IGTLKKGDKVKVLGVDGQDWAKITYGSGQRGYVPGYVV   61 (63)
T ss_pred             eEEecCCCEEEEEEccCCceEEEEcCCCCEEEEEeeee
Confidence            34478999999998765589999965 99999987665

>KOG1702|consensus

Probab=93.11  E-value=0.059  Score=43.69  Aligned_cols=37  Identities=24%  Similarity=0.213  Sum_probs=32.4

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccc
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR  170 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f  170 (225)
                      ..+.|.|+|.++++++++|.-||.|..+.. ++.||+.
T Consensus       208 ktyra~ydysaqdedevsF~dgd~ivnvq~-iddGWmy  244 (264)
T KOG1702|consen  208 KTYRAFYDYSAQDEDEVSFVDGDYIVNVQS-IDDGWMY  244 (264)
T ss_pred             ccchhhccCcccCcceeEEecCCeEEEEEe-ccCCcee
Confidence            568999999999999999999999977776 7777874

>KOG0040|consensus

Probab=92.45  E-value=0.0039  Score=62.91  Aligned_cols=56  Identities=27%  Similarity=0.520  Sum_probs=51.4

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      +.|+|||...    ++.+.+.++||++.++....-.||..+++.+.|++|..||+.+.+.
T Consensus       971 v~alyd~q~k----Sprev~mKkgDvltll~s~nkdwwkve~~d~qg~vpa~yvk~~~~~ 1026 (2399)
T KOG0040|consen  971 VLALYDYQEK----SPREVTMKKGDVLTLLNSINKDWWKVEVNDRQGFVPAAYVKRLDPG 1026 (2399)
T ss_pred             HHHHHHHHhc----CHHHHHHhhhhHHHHHhhcccccccchhhhhcCcchHHHHHHhccC
Confidence            5699999999    8899999999999988877889999999999999999999998766

>PRK10884 SH3 domain-containing protein; Provisional

Probab=91.52  E-value=0.22  Score=40.80  Aligned_cols=41  Identities=10%  Similarity=0.183  Sum_probs=33.4

Q ss_pred             cccccCCCeEEEEEecC-CCeEEEE-ECCeEEEeeCCcEEeec
Q psy15850         79 ELSFKKGDIIFVRRQVD-KNWYEGE-HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        79 eLs~~~Gdii~v~~~~~-~~Ww~g~-~~g~~G~~P~nyv~~~~  119 (225)
                      --++..|+.+.|+...+ .+|.+.+ .+|+.||+++.|+...+
T Consensus        47 v~~l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~p   89 (206)
T PRK10884         47 VGTLNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLSTTP   89 (206)
T ss_pred             EEEEcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcCCc
Confidence            34688999999998665 5899998 57899999999986543

>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=90.79  E-value=0.67  Score=29.25  Aligned_cols=36  Identities=11%  Similarity=0.134  Sum_probs=29.2

Q ss_pred             cccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcE
Q psy15850         79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV  115 (225)
Q Consensus        79 eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv  115 (225)
                      -..+.+|..+.|+.. ..+|.+.+.+|..||++.+.|
T Consensus        18 v~~l~~g~~v~v~~~-~~~W~~V~~~g~~GWv~~~~l   53 (55)
T PF06347_consen   18 VARLEPGVPVRVIEC-RGGWCKVRADGRTGWVHKSLL   53 (55)
T ss_pred             EEEECCCCEEEEEEc-cCCeEEEEECCeEEeEEeeec
Confidence            466778888888854 668999999999999987654

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.

>KOG3812|consensus

Probab=90.77  E-value=0.12  Score=45.05  Aligned_cols=51  Identities=18%  Similarity=0.436  Sum_probs=40.2

Q ss_pred             EEEeecccCCCCCC---CCccccccCCCeEEEEEecCCCeEEEEE---CCeEEEeeC
Q psy15850         62 LQELHDISSRRHTD---NFTELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPF  112 (225)
Q Consensus        62 ~~al~d~~~~~~~~---~~~eLs~~~Gdii~v~~~~~~~Ww~g~~---~g~~G~~P~  112 (225)
                      |++.-+|.+.-+..   ....++|...|.+-|..+-++.||-|++   ++..||+|+
T Consensus        61 V~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPs  117 (475)
T KOG3812|consen   61 VRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPS  117 (475)
T ss_pred             EEeccccCCccCCCCCCCCceeeeccccceeehhhcccchhHHHHhhcCCccccccc
Confidence            57777888775332   2347999999999999999999999993   445799997

>KOG3705|consensus

Probab=87.07  E-value=0.55  Score=42.03  Aligned_cols=53  Identities=23%  Similarity=0.235  Sum_probs=38.5

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEe
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEI  117 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~  117 (225)
                      .++++++..++    +..|+.++.||+|-|-...=+|.-+|.  ..++.|+||+--|+.
T Consensus       511 n~ivi~aH~pr----t~~ei~l~vGD~vgvAGNHWdGySKG~Nr~t~~~GlfPSyKvre  565 (580)
T KOG3705|consen  511 NVIVIEAHIPR----TNKEIDLKVGDKVGVAGNHWDGYSKGTNRQTYKEGLFPSYKVRE  565 (580)
T ss_pred             ceEEEEecCCC----cccccCcccCCeeeecccccccccccccccccccCCCccceeee
Confidence            36888998888    788999999999977543222333343  356889999977765

>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []

Probab=86.86  E-value=0.7  Score=31.08  Aligned_cols=51  Identities=16%  Similarity=0.050  Sum_probs=39.3

Q ss_pred             CCcCcEEEcccccCCCccccccccccceEEeccccc-cc-cc------ccchhhhhhcc
Q psy15850        130 LSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQ-YR------RPVRNEIKELI  180 (225)
Q Consensus       130 ~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~-~~------f~~~~~l~e~~  180 (225)
                      ...|.|+.+.+-...+.+.|++..++.+..+..... .+ |.      |+++.+|+++|
T Consensus        19 ~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~~y   77 (77)
T PF00017_consen   19 KPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENGGYFLSDGKKFPSLSDLVEHY   77 (77)
T ss_dssp             SSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTSEEESSTSSEBSSHHHHHHHH
T ss_pred             CCCCeEEEEeccccccccccccccccccEEEEEEecCCceEEccCCCcCCCHHHHHHhC
Confidence            467899999999888899999999998866654322 22 33      78999999875

Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....

>KOG4429|consensus

Probab=86.65  E-value=0.36  Score=41.37  Aligned_cols=51  Identities=14%  Similarity=-0.080  Sum_probs=41.7

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchhHH
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEEL  185 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~e~  185 (225)
                      .|.+.|+|.+..+++|....|+++.+-+. ..+||||+.++.-.++..-.++
T Consensus       365 lcdafYSfqarqddel~~e~gditif~Ek-keeg~~f~rl~gd~~hf~Aa~i  415 (421)
T KOG4429|consen  365 LCDAFYSFQARQDDELGGEIGDITIFDEK-KEEGPTFCRLLGDFEHFHAAEI  415 (421)
T ss_pred             HhhhhhccccccccccCCcccceeeecCc-ccCCCceeeeccccCCCcHHHH
Confidence            57899999999999999999998866554 7789999888877776665443

>KOG3655|consensus

Probab=84.14  E-value=0.48  Score=43.07  Aligned_cols=40  Identities=20%  Similarity=0.253  Sum_probs=35.0

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccc
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV  172 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~  172 (225)
                      ...+.|+|+|.+.++.+|+|-.++.|++|+. +.+|||-+.
T Consensus       427 ~q~A~A~~dyqAAddtEisf~p~d~it~Id~-vdegww~g~  466 (484)
T KOG3655|consen  427 PQTARALYDYQAADDTEISFDPPDAITLIDQ-VDEGWWTGQ  466 (484)
T ss_pred             CCCccccccccccCCcccccCCccccccccc-cCCcccccc
Confidence            3467899999999999999999999999987 889999543

>KOG2222|consensus

Probab=83.89  E-value=0.31  Score=44.51  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=43.3

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..+.|+.+|...+++||-|+++|+|+++.. ..++.|-+.+|+|..|++..
T Consensus       549 krakal~df~r~dddelgfrkndiitiise-kdehcwvgelnglrgwfpak  598 (848)
T KOG2222|consen  549 KRAKALHDFAREDDDELGFRKNDIITIISE-KDEHCWVGELNGLRGWFPAK  598 (848)
T ss_pred             HHHHHHhhhhhccccccccccccEEEEeec-CCcceeeeccccccccchHH
Confidence            357889999999999999999999999987 67888888888888888753

>KOG3875|consensus

Probab=83.14  E-value=0.22  Score=42.89  Aligned_cols=52  Identities=29%  Similarity=0.264  Sum_probs=38.3

Q ss_pred             CcEEEcccccCCCccccccccccceEEeccccc-----ccccccch-hhhhhccchhH
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-----LQYRRPVR-NEIKELISEEE  184 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-----~~~~f~~~-~~l~e~~~~~e  184 (225)
                      ..|.|.|+|.+.++.||+|++||++.++.++..     +||.-.++ +.-..+++-+.
T Consensus       269 ~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NY  326 (362)
T KOG3875|consen  269 EFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINY  326 (362)
T ss_pred             HHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhh
Confidence            457899999999999999999999988876533     45655554 44455555544

>PRK13914 invasion associated secreted endopeptidase; Provisional

Probab=82.56  E-value=1.9  Score=39.71  Aligned_cols=39  Identities=18%  Similarity=0.227  Sum_probs=33.0

Q ss_pred             cccccCCCeEEEEEecCCCeEEEEE-CCeEEEeeCCcEEe
Q psy15850         79 ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEI  117 (225)
Q Consensus        79 eLs~~~Gdii~v~~~~~~~Ww~g~~-~g~~G~~P~nyv~~  117 (225)
                      -=++..|+.|.|+...+.+|++.+. +|+.||+-+.|+..
T Consensus       102 Igsl~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~  141 (481)
T PRK13914        102 ITSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD  141 (481)
T ss_pred             eeeecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccC
Confidence            4568899999998655678999997 59999999999875

>smart00252 SH2 Src homology 2 domains

Probab=81.05  E-value=1.3  Score=30.19  Aligned_cols=52  Identities=13%  Similarity=0.032  Sum_probs=40.0

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccccc--cccc------ccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT--LQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~--~~~~------f~~~~~l~e~~~~~  183 (225)
                      .|.|+.+.+....+.+.|+++.+..+.++.....  ++|.      |+++.+|+++|...
T Consensus        22 ~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~~y~~~   81 (84)
T smart00252       22 DGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVEHYQKN   81 (84)
T ss_pred             CcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECCCCccCCHHHHHHHHhhC
Confidence            6889999998878888999999888876654322  2333      78899999998764

Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.

>KOG4773|consensus

Probab=80.74  E-value=0.29  Score=42.79  Aligned_cols=109  Identities=17%  Similarity=0.145  Sum_probs=65.2

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE---ECCeEEEeeCCcEEeecCCCC-------CCCc---
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE---HNAMIGLFPFNYVEIIPYDKI-------RTAP---  127 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~---~~g~~G~~P~nyv~~~~~~~~-------~~~~---  127 (225)
                      ++...|||.++    ..+++.-.....        ..|....   .-|..|++|..||.+.+....       .+.+   
T Consensus        91 pA~v~fdfkqe----~Ae~r~~~ln~y--------~e~LlslPi~~l~~p~l~~fffvsp~D~~dVpeai~r~~Prt~~~  158 (386)
T KOG4773|consen   91 PAIVYFDFKQE----IAEERIPALNAY--------CEWLLSLPIGRLGGPGLRPFFFVSPYDSEDVPEAIRRLRPRTRKW  158 (386)
T ss_pred             cceeEechhhh----hhhhhhHHHHHH--------HHHHHhcchhhcCCCCceeeeeeccchHhhhhHHHHhcCchhhhc
Confidence            35667777776    344432222111        3344433   235578899999988763211       0110   


Q ss_pred             -------CCC-----CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        128 -------KKL-----SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       128 -------~~~-----~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                             ..+     -...+.+.++|......||.|..|+++.++.. .+.+||++.-..+..||+-
T Consensus       159 ks~~~skasni~~~~~~q~~~a~~df~gns~~EL~l~agdV~~~~~r-~ek~W~~gk~R~~~g~yp~  224 (386)
T KOG4773|consen  159 KSDGVSKASNIVLGMAAQRAEASFDFPGNSKLELNLVAGDVEFLLSR-DEKYWLLGKVRGLTGYYPD  224 (386)
T ss_pred             cccccCccccccchhhhHHHHhhccCCCCccceeeeehhhHHHHHhh-cccceeeeeeccccccccH
Confidence                   000     11245678888888899999999999988887 7778886655555555543

>KOG1843|consensus

Probab=80.51  E-value=1  Score=40.31  Aligned_cols=48  Identities=15%  Similarity=0.155  Sum_probs=38.3

Q ss_pred             cEEEcccccCCCccccccccccceEEeccc-ccccccccchhhhhhccc
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYRRPVRNEIKELIS  181 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~f~~~~~l~e~~~  181 (225)
                      .+.++|+|..+....++|.+||+|+++.+- ....||....+......+
T Consensus       418 ~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr~~~~egifP  466 (473)
T KOG1843|consen  418 IATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGRGNGYEGIFP  466 (473)
T ss_pred             eeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhhccccccccc
Confidence            789999999999999999999999988773 337888766665544443

>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr)

Probab=80.06  E-value=1.9  Score=29.86  Aligned_cols=56  Identities=18%  Similarity=0.088  Sum_probs=42.5

Q ss_pred             CCcCcEEEcccccCCCccccccccccceEEeccc-ccccc-------cccchhhhhhccchhHH
Q psy15850        130 LSEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQY-------RRPVRNEIKELISEEEL  185 (225)
Q Consensus       130 ~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~-------~f~~~~~l~e~~~~~e~  185 (225)
                      ...|.|+.+.+....+.+.|++..++.+.++... ..++|       .|+++.+|+++|....+
T Consensus        19 ~~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~~y~~~~~   82 (94)
T cd00173          19 KPDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDGYYLLGEGRSFPSLPELIEHYQKNPL   82 (94)
T ss_pred             CCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCCeEEecCCCccCCHHHHHHHHhhCcc
Confidence            3568899999988888899999999888766543 22333       37899999999987653

SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	225
2dlm_A	68	Solution Structure Of The First Sh3 Domain Of Human		2e-10
2nwm_A	65	Solution Structure Of The First Sh3 Domain Of Human		4e-10
2dl3_A	68	Solution Structure Of The First Sh3 Domain Of Human		2e-09
2djq_A	68	The Solution Structure Of The First Sh3 Domain Of M		4e-09
2dbm_A	73	Solution Structures Of The Sh3 Domain Of Human Sh3-		1e-08
3iql_A	71	Crystal Structure Of The Rat Endophilin-A1 Sh3 Doma		1e-08
2ew3_A	68	Solution Structure Of The Sh3 Domain Of Human Sh3gl		1e-08
2ed0_A	78	Solution Structure Of The Sh3 Domain Of Abl Interac		9e-08
1gri_A	217	Grb2 Length = 217		2e-07
1gri_A	217	Grb2 Length = 217		2e-06
3c0c_A	73	X-Ray Crystal Structure Of The Rat Endophilin A2 Sh		3e-07
3gf9_A	295	Crystal Structure Of Human Intersectin 2 Rhogef Dom		4e-07
1udl_A	98	The Solution Structure Of The Fifth Sh3 Domain Of I		2e-06
2df6_A	59	Crystal Structure Of The Sh3 Domain Of Betapix In C		2e-06
2dyb_A	341	The Crystal Structure Of Human P40(Phox) Length = 3		2e-06
2esw_A	61	Atomic Structure Of The N-Terminal Sh3 Domain Of Mo		2e-06
3jv3_A	283	Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l		2e-06
2ak5_A	64	Beta Pix-Sh3 Complexed With A Cbl-B Peptide Length		3e-06
1sem_A	58	Structural Determinants Of Peptide-Binding Orientat		4e-06
1x2q_A	88	Solution Structure Of The Sh3 Domain Of The Signal		4e-06
3sem_A	60	Sem5 Sh3 Domain Complexed With Peptoid Inhibitor Le		5e-06
1z9q_A	79	Solution Structure Of Sh3 Domain Of P40phox Length		6e-06
1k76_A	62	Solution Structure Of The C-Terminal Sem-5 Sh3 Doma		8e-06
1w6x_A	60	Sh3 Domain Of P40phox, Component Of The Nadph Oxida		1e-05
2ecz_A	70	Solution Structure Of The Sh3 Domain Of Sorbin And		1e-05
2epd_A	76	Solution Structure Of Sh3 Domain In Rho-Gtpase-Acti		2e-05
2o2w_A	67	Extending Powder Diffraction To Proteins: Structure		2e-05
1ujy_A	76	Solution Structure Of Sh3 Domain In RacCDC42 GUANIN		2e-05
2l0a_A	72	Solution Nmr Structure Of Signal Transducing Adapte		3e-05
4gbq_A	74	Solution Nmr Structure Of The Grb2 N-Terminal Sh3 D		3e-05
2vwf_A	58	Grb2 Sh3c (2) Length = 58		5e-05
1io6_A	59	Growth Factor Receptor-Bound Protein 2 (Grb2) C-Ter		5e-05
1gcq_A	61	Crystal Structure Of Vav And Grb2 Sh3 Domains Lengt		5e-05
1zsg_A	65	Beta Pix-Sh3 Complexed With An Atypical Peptide Fro		9e-05
2yun_A	79	Solution Structure Of The Sh3 Domain Of Human Nostr		1e-04
2vvk_A	56	Grb2 Sh3c (1) Length = 56		1e-04
2dl8_A	72	Solution Structure Of The Sh3 Domain Of Human Slit-		1e-04
2ydl_A	69	Crystal Structure Of Sh3c From Cin85 Length = 69		1e-04
2k6d_A	62	Cin85 Sh3-C Domain In Complex With Ubiquitin Length		1e-04
1zlm_A	58	Crystal Structure Of The Sh3 Domain Of Human Osteoc		2e-04
1x2k_A	68	Solution Structure Of The Sh3 Domain Of Human Osteo		2e-04
2o2o_A	92	Solution Structure Of Domain B From Human Cin85 Pro		2e-04
1uj0_A	62	Crystal Structure Of Stam2 Sh3 Domain In Complex Wi		2e-04
2k9g_A	73	Solution Structure Of The Third Sh3 Domain Of The C		2e-04
2yup_A	90	Solution Structure Of The Second Sh3 Domain Of Huma		2e-04
2gnc_A	60	Crystal Structure Of Srgap1 Sh3 Domain In The Slit-		2e-04
2drk_A	59	Acanthamoeba Myosin I Sh3 Domain Bound To Acan125 L		2e-04
2drm_A	58	Acanthamoeba Myosin I Sh3 Domain Bound To Acan125 L		2e-04
1oot_A	60	Crystal Structure Of The Sh3 Domain From A S. Cerev		3e-04
2yuo_A	78	Solution Structure Of The Sh3 Domain Of Mouse Run A		3e-04
2a08_A	60	Structure Of The Yeast Yhh6 Sh3 Domain Length = 60		4e-04
1aze_A	56	Nmr Structure Of The Complex Between The C32s-Y7v M		4e-04
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		4e-04
1wi7_A	68	Solution Structure Of The Sh3 Domain Of Sh3-Domain		5e-04
3u23_A	65	Atomic Resolution Crystal Structure Of The 2nd Sh3		5e-04
2fei_A	65	Solution Structure Of The Second Sh3 Domain Of Huma		5e-04
2kbt_A	142	Attachment Of An Nmr-Invisible Solubility Enhanceme		7e-04
1k4u_S	62	Solution Structure Of The C-Terminal Sh3 Domain Of		9e-04

>pdb|2DLM|A Chain A, Solution Structure Of The First Sh3 Domain Of Human Vinexin Length = 68

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+ +KGDI+++ ++VDKNW EGEH+  +G+FP NYVE++
Sbjct: 23  ELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVL 62

>pdb|2NWM|A Chain A, Solution Structure Of The First Sh3 Domain Of Human Vinexin And Its Interaction With The Peptides From Vinculin Length = 65

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 36/43 (83%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD 121
           EL+ +KGDI+++ ++VDKNW EGEH+  +G+FP NYVE++P +
Sbjct: 17  ELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVLPLE 59

>pdb|2DL3|A Chain A, Solution Structure Of The First Sh3 Domain Of Human Sorbin And Sh3 Domain-Containing Protein 1 Length = 68

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/40 (50%), Positives = 33/40 (82%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL  +KGDI+++ +Q+D+NWYEGEH+  +G+FP  Y+E++
Sbjct: 23  ELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELL 62

>pdb|2DJQ|A Chain A, The Solution Structure Of The First Sh3 Domain Of Mouse Sh3 Domain Containing Ring Finger 2 Length = 68

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           N  +L F KGD+I +RRQ+D+NWY+GE N + G+FP + VE+I
Sbjct: 20  NPGDLKFNKGDVILLRRQLDENWYQGEINGVSGIFPASSVEVI 62

>pdb|2DBM|A Chain A, Solution Structures Of The Sh3 Domain Of Human Sh3- Containing Grb2-Like Protein 2 Length = 73

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +N  EL FK+GDII +  Q+D+NWYEG  +   G FP NYVEI+
Sbjct: 19  ENEGELGFKEGDIITLTNQIDENWYEGMLHGHSGFFPINYVEIL 62

>pdb|3IQL|A Chain A, Crystal Structure Of The Rat Endophilin-A1 Sh3 Domain Length = 71

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +N  EL FK+GDII +  Q+D+NWYEG  +   G FP NYVEI+
Sbjct: 23  ENEGELGFKEGDIITLTNQIDENWYEGMLHGQSGFFPINYVEIL 66

>pdb|2EW3|A Chain A, Solution Structure Of The Sh3 Domain Of Human Sh3gl3 Length = 68

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +N  EL FK+GDII +  Q+D+NWYEG  +   G FP NYVE+I
Sbjct: 15  ENQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVI 58

>pdb|2ED0|A Chain A, Solution Structure Of The Sh3 Domain Of Abl Interactor 2 (Abelson Interactor 2) Length = 78

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           ELSF++G II+V ++ D  WYEG  N + GLFP NYVE I
Sbjct: 33  ELSFQEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESI 72

>pdb|1GRI|A Chain A, Grb2 Length = 217

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 30  NEIKELIS---EEELARRQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTELSFKKGD 86
           N + EL+       ++R Q   +R I Q  ++  Y+Q L D   +       EL F++GD
Sbjct: 126 NSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDG----ELGFRRGD 181
Query: 87  IIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
            I V    D NW++G  +   G+FP NYV
Sbjct: 182 FIHVMDNSDPNWWKGACHGQTGMFPRNYV 210

>pdb|1GRI|A Chain A, Grb2 Length = 217

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 28/157 (17%)
Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARA 137
           ELSFK+GDI+ V   + D+NWY+ E N   G  P NY+E+ P+        +     A+A
Sbjct: 16  ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPR-----AKA 70
Query: 138 KFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR-------------------NEIKE 178
           +     Q H    L++ES     D  +++++   V+                   N + E
Sbjct: 71  EEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNE 130
Query: 179 LIS---EEELARRQAEAMRRIYQEERRRKYLQELHDI 212
           L+       ++R Q   +R I Q  ++  Y+Q L D 
Sbjct: 131 LVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDF 167

>pdb|3C0C|A Chain A, X-Ray Crystal Structure Of The Rat Endophilin A2 Sh3 Domain Length = 73

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +N  EL F++GD+I +  Q+D+NWYEG  +   G FP +YV+++
Sbjct: 25  ENDGELGFREGDLITLTNQIDENWYEGXLHGQSGFFPLSYVQVL 68

>pdb|3GF9|A Chain A, Crystal Structure Of Human Intersectin 2 Rhogef Domain Length = 295

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 57  RRRKYLQELHDISSRRHT-DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           R   Y Q    I+   +  +N  ELSF KG +I V  + D +W++GE N + GLFP NYV
Sbjct: 11  RENLYFQGCQVIAMYDYAANNEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYV 70
Query: 116 EI 117
           ++
Sbjct: 71  KM 72

>pdb|1UDL|A Chain A, The Solution Structure Of The Fifth Sh3 Domain Of Intersectin 2 (Kiaa1256) Length = 98

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 74  TDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
            +N  ELSF KG +I V  + D +W++GE N + GLFP NYV++
Sbjct: 45  ANNEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKM 88

>pdb|2DF6|A Chain A, Crystal Structure Of The Sh3 Domain Of Betapix In Complex With A High Affinity Peptide From Pak2 Length = 59

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 26/43 (60%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           N  ELSF KGD+I V R  +  W+EG HN   G FP NYV  I
Sbjct: 17  NEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI 59

>pdb|2DYB|A Chain A, The Crystal Structure Of Human P40(Phox) Length = 341

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+FK GD+IF+  +++K+W EG      G+FP ++V+I+
Sbjct: 190 ELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL 229

>pdb|2ESW|A Chain A, Atomic Structure Of The N-Terminal Sh3 Domain Of Mouse Beta Pix,P21-Activated Kinase (Pak)-Interacting Exchange Factor Length = 61

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 26/43 (60%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           N  ELSF KGD+I V R  +  W+EG HN   G FP NYV  I
Sbjct: 19  NEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI 61

>pdb|3JV3|A Chain A, Structure Of Sh3e-Dh Unit Of Murine Intersectin-1l Length = 283

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           N  EL+F KG II V  + D +W++GE +  +GLFP NYV++
Sbjct: 15  NDDELAFSKGQIINVLNKEDPDWWKGEVSGQVGLFPSNYVKL 56

>pdb|2AK5|A Chain A, Beta Pix-Sh3 Complexed With A Cbl-B Peptide Length = 64

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/45 (55%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV-EIIP 119
           N  ELSF KGD+I V R  +  W+EG HN   G FP NYV EI P
Sbjct: 19  NEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKP 63

>pdb|1SEM|A Chain A, Structural Determinants Of Peptide-Binding Orientation And Of Sequence Specificity In Sh3 Domains Length = 58

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 60  KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           K++Q L D + +       EL+FK+GD+I +  + D NW+EG+ N   G+FP NYV   P
Sbjct: 3   KFVQALFDFNPQESG----ELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYV--CP 56
Query: 120 YD 121
           Y+
Sbjct: 57  YN 58

>pdb|1X2Q|A Chain A, Solution Structure Of The Sh3 Domain Of The Signal Transducing Adaptor Molecule 2 Length = 88

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL+FK G+II V    D NW++GE++  IGLFP N+V
Sbjct: 33  ELTFKHGEIIIVLDDSDANWWKGENHRGIGLFPSNFV 69

>pdb|3SEM|A Chain A, Sem5 Sh3 Domain Complexed With Peptoid Inhibitor Length = 60

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 60  KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           K++Q L D + +       EL+FK+GD+I +  + D NW+EG+ N   G+FP NYV   P
Sbjct: 3   KFVQALFDFNPQESG----ELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYV--CP 56
Query: 120 YD 121
           Y+
Sbjct: 57  YN 58

>pdb|1Z9Q|A Chain A, Solution Structure Of Sh3 Domain Of P40phox Length = 79

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+FK GD+IF+  +++K+W EG      G+FP ++V+I+
Sbjct: 34  ELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL 73

>pdb|1K76|A Chain A, Solution Structure Of The C-Terminal Sem-5 Sh3 Domain (Minimized Average Structure) Length = 62

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 60  KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           K++Q L D + +       EL+FK+GD+I +  + D NW+EG+ N   G+FP NYV   P
Sbjct: 5   KFVQALFDFNPQESG----ELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVA--P 58
Query: 120 YD 121
           Y+
Sbjct: 59  YN 60

>pdb|1W6X|A Chain A, Sh3 Domain Of P40phox, Component Of The Nadph Oxidase Length = 60

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+FK GD+IF+  +++K+W EG      G+FP ++V+I+
Sbjct: 20  ELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL 59

>pdb|2ECZ|A Chain A, Solution Structure Of The Sh3 Domain Of Sorbin And Sh3 Domain-Containing Protein 1 Length = 70

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 73  HTDNFTELSFKKGDIIFVRRQVDKNWYEG--EHNAMIGLFPFNYVEII 118
           + D   E+SF+KG+ I + RQVD+NWYEG     +  G+FP  YV++I
Sbjct: 17  NGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVI 64

>pdb|2EPD|A Chain A, Solution Structure Of Sh3 Domain In Rho-Gtpase-Activating Protein 4 Length = 76

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSF++GD++ +  +   +W+ GEHN M GL P  Y+ +
Sbjct: 26  ELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITL 64

>pdb|2O2W|A Chain A, Extending Powder Diffraction To Proteins: Structure Solution Of The Second Sh3 Domain From Ponsin Length = 67

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 73  HTDNFTELSFKKGDIIFVRRQVDKNWYEG--EHNAMIGLFPFNYVEII 118
           + D   E+SF+KG+ I + RQVD+NWYEG     +  G+FP  YV++I
Sbjct: 16  NGDTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVI 63

>pdb|1UJY|A Chain A, Solution Structure Of Sh3 Domain In RacCDC42 GUANINE Nucleotide Exchange Factor(Gef) 6 Length = 76

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           ELS  KGDII+V R  +  W+EG  N   G FP NYV
Sbjct: 26  ELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYV 62

>pdb|2L0A|A Chain A, Solution Nmr Structure Of Signal Transducing Adapter Molecule 1 Stam-1 From Homo Sapiens, Northeast Structural Genomics Consortium Target Hr4479e Length = 72

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL+FK G+II V    D NW++GE +  IGLFP N+V
Sbjct: 33  ELTFKAGEIITVLDDSDPNWWKGETHQGIGLFPSNFV 69

>pdb|4GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain Complexed With A Ten-Residue Peptide Derived From Sos Direct Refinement Against Noes, J-Couplings, And 1h And 13c Chemical Shifts, 15 Structures Length = 74

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEIIPY 120
           ELSFK+GDI+ V   + D+NWY+ E N   G  P NY+E+ P+
Sbjct: 25  ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPH 67

>pdb|2VWF|A Chain A, Grb2 Sh3c (2) Length = 58

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 61  YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           Y+Q L D   +       EL F++GD I V    D NW++G  +   G+FP NYV  +
Sbjct: 4   YVQALFDFDPQEDG----ELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTAV 57

>pdb|1IO6|A Chain A, Growth Factor Receptor-Bound Protein 2 (Grb2) C-Terminal Sh3 Domain Complexed With A Ligand Peptide (Nmr, Minimized Mean Structure) Length = 59

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 61  YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           Y+Q L D   +       EL F++GD I V    D NW++G  +   G+FP NYV
Sbjct: 4   YVQALFDFDPQEDG----ELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYV 54

>pdb|1GCQ|A Chain A, Crystal Structure Of Vav And Grb2 Sh3 Domains Length = 61

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 61  YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           Y+Q L D   +       EL F++GD I V    D NW++G  +   G+FP NYV
Sbjct: 4   YVQALFDFDPQEDG----ELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYV 54

>pdb|1ZSG|A Chain A, Beta Pix-Sh3 Complexed With An Atypical Peptide From Alpha- Pak Length = 65

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 24/40 (60%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           N  ELSF KGD+I V R  +  W+EG  N   G FP NYV
Sbjct: 21  NEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGWFPSNYV 60

>pdb|2YUN|A Chain A, Solution Structure Of The Sh3 Domain Of Human Nostrin Length = 79

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPK 128
           EL+ +KGDI+ +  + ++ W+ G  N   G FP  YVE +P +   TA K
Sbjct: 23  ELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPSNAGNTATK 72

>pdb|2VVK|A Chain A, Grb2 Sh3c (1) Length = 56

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL F++GD I V    D NW++G  +   G+FP NYV
Sbjct: 16  ELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYV 52

>pdb|2DL8|A Chain A, Solution Structure Of The Sh3 Domain Of Human Slit-Robo Rho Gtpase-Activating Protein 2 Length = 72

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSFKKG  + + ++   +W+EG HN + GL P  Y+ +
Sbjct: 25  ELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVV 63

>pdb|2YDL|A Chain A, Crystal Structure Of Sh3c From Cin85 Length = 69

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 76  NFTELSFKKGDIIFVRRQ--VDKNWYEGEHNAMIGLFPFNYVEIIP 119
           N  EL+ K+GDI+ +  +  +D  W+EGE N   G+FP N+V+++P
Sbjct: 15  NDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLP 60

>pdb|2K6D|A Chain A, Cin85 Sh3-C Domain In Complex With Ubiquitin Length = 62

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 76  NFTELSFKKGDIIFVRRQ--VDKNWYEGEHNAMIGLFPFNYVEIIP 119
           N  EL+ K+GDI+ +  +  +D  W+EGE N   G+FP N+V+++P
Sbjct: 16  NDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLP 61

>pdb|1ZLM|A Chain A, Crystal Structure Of The Sh3 Domain Of Human Osteoclast Stimulating Factor Length = 58

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL F++GDII++    D NW++G      GL P NYV
Sbjct: 19  ELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYV 55

>pdb|1X2K|A Chain A, Solution Structure Of The Sh3 Domain Of Human Osteoclast Stimulating Factor 1 (Ostf1) Length = 68

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL F++GDII++    D NW++G      GL P NYV
Sbjct: 23  ELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYV 59

>pdb|2O2O|A Chain A, Solution Structure Of Domain B From Human Cin85 Protein Length = 92

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           N  EL  K GDII V  +V++ W+EG  N   G+FP N++
Sbjct: 31  NDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFI 70

>pdb|1UJ0|A Chain A, Crystal Structure Of Stam2 Sh3 Domain In Complex With A Ubpy-Derived Peptide Length = 62

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL+FK G++I V    D NW++GE++   GLFP N+V
Sbjct: 21  ELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFV 57

>pdb|2K9G|A Chain A, Solution Structure Of The Third Sh3 Domain Of The Cin85 Adapter Protein Length = 73

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 76  NFTELSFKKGDIIFVRRQ--VDKNWYEGEHNAMIGLFPFNYVEIIPYD 121
           N  EL+ K+GDI+ +  +  +D  W+EGE N   G+FP N+V+++P D
Sbjct: 22  NDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPD 69

>pdb|2YUP|A Chain A, Solution Structure Of The Second Sh3 Domain Of Human Vinexin Length = 90

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEG--EHNAMIGLFPFNYVEI 117
           ELSF+KG+ I + R+V++NWYEG        G+FP +YV++
Sbjct: 33  ELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQV 73

>pdb|2GNC|A Chain A, Crystal Structure Of Srgap1 Sh3 Domain In The Slit-Robo Signaling Pathway Length = 60

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSFKKG  + +  +  ++W+EG HN + GL P  Y+ +
Sbjct: 22  ELSFKKGASLLLYHRASEDWWEGRHNGIDGLVPHQYIVV 60

>pdb|2DRK|A Chain A, Acanthamoeba Myosin I Sh3 Domain Bound To Acan125 Length = 59

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+FK+GD I V ++    W+EGE N   G  P NYV+ I
Sbjct: 20  ELTFKEGDTIIVHQKDPAGWWEGELNGKRGWVPANYVQDI 59

>pdb|2DRM|A Chain A, Acanthamoeba Myosin I Sh3 Domain Bound To Acan125 Length = 58

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+FK+GD I V ++    W+EGE N   G  P NYV+ I
Sbjct: 19  ELTFKEGDTIIVHQKDPAGWWEGELNGKRGWVPANYVQDI 58

>pdb|1OOT|A Chain A, Crystal Structure Of The Sh3 Domain From A S. Cerevisiae Hypothetical 40.4 Kda Protein At 1.39 A Resolution Length = 60

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 79  ELSFKKGDIIFVRRQVD--KNWYEGEHNAMIGLFPFNYVEII 118
           +L F+KGD+I + ++ D   +W+ G  N   G+FP NYVE++
Sbjct: 19  DLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV 60

>pdb|2YUO|A Chain A, Solution Structure Of The Sh3 Domain Of Mouse Run And Tbc1 Domain Containing 3 Length = 78

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 57  RRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           RR K L +       RH D+  EL F+K DII +  Q D++ + GE N + G FP  +VE
Sbjct: 8   RRAKALLDFE-----RHDDD--ELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVE 60
Query: 117 II 118
           ++
Sbjct: 61  VL 62

>pdb|2A08|A Chain A, Structure Of The Yeast Yhh6 Sh3 Domain Length = 60

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 79  ELSFKKGDIIFVRRQVD--KNWYEGEHNAMIGLFPFNYVEI 117
           +L+FKKGD+I + ++ D   +W+ G  N   G+FP NYV +
Sbjct: 19  DLAFKKGDVITILKKSDSQNDWWTGRTNGKEGIFPANYVRV 59

>pdb|1AZE|A Chain A, Nmr Structure Of The Complex Between The C32s-Y7v Mutant Of The Nsh3 Domain Of Grb2 With A Peptide From Sos, 10 Structures Length = 56

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSFK+GDI+ V   + D+NWY+ E N   G  P NY+E+
Sbjct: 16  ELSFKRGDILKVLNEESDQNWYKAELNGKDGFIPKNYIEM 55

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYV 115
           EL  ++GDII++    D NW++G      GL P NYV
Sbjct: 30  ELYIEEGDIIYITDXSDTNWWKGTSKGRTGLIPSNYV 66

>pdb|1WI7|A Chain A, Solution Structure Of The Sh3 Domain Of Sh3-Domain Kinase Binding Protein 1 Length = 68

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           N  EL  K GDII V  +V++ W+EG  N   G+FP N+++
Sbjct: 20  NDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIK 60

>pdb|3U23|A Chain A, Atomic Resolution Crystal Structure Of The 2nd Sh3 Domain From Human Cd2ap (Cms) In Complex With A Proline-Rich Peptide From Human Rin3 Length = 65

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           N  EL  K GDII +  +V++ W+ G  N  +GLFP N+V+
Sbjct: 20  NEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVK 60

>pdb|2FEI|A Chain A, Solution Structure Of The Second Sh3 Domain Of Human Cms Protein Length = 65

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           N  EL  K GDII +  +V++ W+ G  N  +GLFP N+V+
Sbjct: 14  NEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVK 54

>pdb|2KBT|A Chain A, Attachment Of An Nmr-Invisible Solubility Enhancement Tag (Inset) Using A Sortase-Mediated Protein Ligation Method Length = 142

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 78  TELSFKKGDII-FVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           +ELS K+GDII  + ++  + W+ GE    IG FP NYVE
Sbjct: 20  SELSLKEGDIIKILNKKGQQGWWRGEIYGRIGWFPSNYVE 59

>pdb|1K4U|S Chain S, Solution Structure Of The C-Terminal Sh3 Domain Of P67phox Complexed With The C-Terminal Tail Region Of P47phox Length = 62

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           +L F++GDII V  +V++ W EGE    +G+FP  +VE
Sbjct: 21  DLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVE 58

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	225
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	2e-21
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	3e-21
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	5e-21
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	5e-21
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens} Length	7e-21
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	2e-20
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	4e-20
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	5e-20
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	6e-20
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	6e-20
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	7e-20
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	7e-20
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	1e-19
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	2e-19
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	3e-19
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	3e-19
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	3e-19
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	5e-19
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	8e-19
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	1e-18
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	1e-18
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	1e-10
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	2e-18
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	4e-18
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	4e-18
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	5e-18
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	5e-18
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	5e-18
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	5e-18
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	1e-17
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	5e-09
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	1e-17
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	2e-17
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	2e-17
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-17
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	2e-17
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	2e-17
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	3e-17
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	4e-17
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	4e-17
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	6e-17
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	8e-17
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	9e-17
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	1e-16
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	1e-16
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	1e-16
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	2e-16
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	2e-16
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	3e-16
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	3e-16
3u23_A	65	CD2-associated protein; structural genomics, struc	3e-16
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	3e-16
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	4e-16
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	5e-16
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	5e-16
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	5e-16
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	5e-16
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	5e-16
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	6e-16
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	7e-16
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	1e-15
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	1e-15
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	1e-15
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	1e-15
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	1e-15
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-15
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	2e-15
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	2e-15
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	3e-15
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	3e-15
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	4e-15
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	4e-15
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	4e-15
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	7e-15
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	9e-15
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	9e-15
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	1e-14
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	1e-14
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	1e-14
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	2e-14
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	2e-14
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	2e-14
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	2e-14
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	4e-14
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	4e-14
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	5e-14
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	6e-14
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	7e-14
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	8e-14
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	1e-13
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	1e-13
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	1e-13
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	1e-13
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	1e-13
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	1e-13
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	2e-13
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	2e-13
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	2e-13
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	3e-13
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	4e-13
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	5e-13
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	6e-13
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	6e-13
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	9e-13
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	9e-13
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	4e-10
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	7e-06
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	1e-12
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	1e-12
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	1e-12
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	2e-12
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	2e-12
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	2e-12
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	2e-12
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	3e-12
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	3e-12
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	4e-12
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	4e-12
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	4e-08
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	6e-12
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	6e-12
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	7e-12
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	2e-11
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	5e-07
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	2e-11
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	2e-11
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	6e-11
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	7e-11
1wxb_A	68	Epidermal growth factor receptor pathway substrate	8e-11
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	8e-11
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	1e-10
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	1e-10
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	2e-10
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	2e-10
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	2e-10
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	3e-10
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	3e-10
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	4e-10
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	4e-10
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	4e-10
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	4e-10
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	5e-10
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	5e-10
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	7e-10
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	7e-10
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	9e-10
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	1e-09
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	1e-09
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	1e-09
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	2e-09
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	4e-09
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	4e-09
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	5e-09
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	7e-09
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	1e-08
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	5e-08
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	1e-08
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	1e-08
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	1e-08
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	1e-08
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	2e-08
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	2e-08
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	3e-08
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	3e-08
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	4e-08
1awj_A	77	ITK; transferase, regulatory intramolecular comple	7e-08
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	7e-08
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	7e-08
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	7e-08
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	8e-08
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	3e-07
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	4e-07
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	4e-07
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	5e-07
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	6e-07
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	2e-06
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	4e-06
1i07_A	60	Epidermal growth factor receptor kinase substrate	5e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	1e-05
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	1e-05
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	2e-05
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	8e-05
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	1e-04
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	1e-04
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	4e-04
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	4e-04

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 83.4 bits (207), Expect = 2e-21
 Identities = 22/41 (53%), Positives = 32/41 (78%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           +L F KGD+I +RRQ+D+NWY+GE N + G+FP + VE+I 
Sbjct: 23  DLKFNKGDVILLRRQLDENWYQGEINGVSGIFPASSVEVIS 63

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 82.7 bits (205), Expect = 3e-21
 Identities = 20/41 (48%), Positives = 33/41 (80%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL  +KGDI+++ +Q+D+NWYEGEH+  +G+FP  Y+E++ 
Sbjct: 23  ELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLS 63

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A Length = 73

 Score = 82.3 bits (204), Expect = 5e-21
 Identities = 23/41 (56%), Positives = 29/41 (70%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL FK+GDII +  Q+D+NWYEG  +   G FP NYVEI+ 
Sbjct: 23  ELGFKEGDIITLTNQIDENWYEGMLHGHSGFFPINYVEILV 63

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 82.3 bits (204), Expect = 5e-21
 Identities = 18/41 (43%), Positives = 29/41 (70%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL F++GD+I +  Q+D+NWYEG  +   G FP +YV+++ 
Sbjct: 29  ELGFREGDLITLTNQIDENWYEGMLHGQSGFFPLSYVQVLV 69

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens} Length = 65

 Score = 81.5 bits (202), Expect = 7e-21
 Identities = 23/43 (53%), Positives = 36/43 (83%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD 121
           EL+ +KGDI+++ ++VDKNW EGEH+  +G+FP NYVE++P +
Sbjct: 17  ELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVLPLE 59

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 80.4 bits (199), Expect = 2e-20
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD 121
           ELSFKKG  + + ++   +W+EG HN + GL P  Y+ +    
Sbjct: 25  ELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTS 67

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 80.1 bits (198), Expect = 4e-20
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
            ELSF++GD++ +  +   +W+ GEHN M GL P  Y+ +  
Sbjct: 25  QELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPA 66

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 79.6 bits (197), Expect = 5e-20
 Identities = 17/41 (41%), Positives = 29/41 (70%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL+FK GD+IF+  +++K+W EG      G+FP ++V+I+ 
Sbjct: 34  ELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILK 74

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 79.1 bits (196), Expect = 6e-20
 Identities = 17/40 (42%), Positives = 29/40 (72%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+FK GD+IF+  +++K+W EG      G+FP ++V+I+
Sbjct: 20  ELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL 59

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1 Length = 63

 Score = 78.9 bits (195), Expect = 6e-20
 Identities = 16/59 (27%), Positives = 30/59 (50%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARA 137
           E++ KKGDI+ +    +K+W++ E N   G  P  YV+ +     +     L + Q ++
Sbjct: 5   EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKELVLALYDYQEKS 63

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 79.2 bits (196), Expect = 7e-20
 Identities = 23/41 (56%), Positives = 29/41 (70%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL FK+GDII +  Q+D+NWYEG  +   G FP NYVE+I 
Sbjct: 19  ELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIV 59

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 78.8 bits (195), Expect = 7e-20
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSFKKG  + +  +  ++W+EG HN + GL P  Y+ +
Sbjct: 22  ELSFKKGASLLLYHRASEDWWEGRHNGIDGLVPHQYIVV 60

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 78.4 bits (194), Expect = 1e-19
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL F++GDII++    D NW++G      GL P NYV    
Sbjct: 23  ELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQS 63

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 78.5 bits (194), Expect = 2e-19
 Identities = 19/50 (38%), Positives = 29/50 (58%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPK 128
           EL+ +KGDI+ +  + ++ W+ G  N   G FP  YVE +P +   TA K
Sbjct: 23  ELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPSNAGNTATK 72

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A Length = 74

 Score = 77.7 bits (192), Expect = 3e-19
 Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD 121
           ELSFK+GDI+ V   + D+NWY+ E N   G  P NY+E+ P+ 
Sbjct: 25  ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHP 68

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A Length = 64

 Score = 77.3 bits (191), Expect = 3e-19
 Identities = 22/41 (53%), Positives = 25/41 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELSF KGD+I V R  +  W+EG HN   G FP NYV  I 
Sbjct: 22  ELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIK 62

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 77.9 bits (192), Expect = 3e-19
 Identities = 20/56 (35%), Positives = 26/56 (46%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEG 133
           T L+ + GDI+ V R      +EGE N   GLFPF +V+I             S G
Sbjct: 33  TALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDPQNPDENESGPSSG 88

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 76.6 bits (189), Expect = 5e-19
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           T L+ + GDI+ V R      +EGE N   GLFPF +V+I  
Sbjct: 18  TALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFD 59

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 78

 Score = 76.6 bits (189), Expect = 8e-19
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
            EL F+K DII +  Q D++ + GE N + G FP  +VE++ 
Sbjct: 22  DELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVEVLD 63

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 62

 Score = 75.7 bits (187), Expect = 1e-18
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           +L F++GDII V  +V++ W EGE    +G+FP  +VE
Sbjct: 21  DLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVE 58

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 79.6 bits (196), Expect = 1e-18
 Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEG-QARA 137
           E++   GD++ V  + +  W+  +  A  G  P +++E +        P+    G    A
Sbjct: 27  EMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVA 86

Query: 138 KFNFVAQTHLELSLVK 153
              + A    E+SL++
Sbjct: 87  IKAYTAVEGDEVSLLE 102

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 57.7 bits (139), Expect = 1e-10
 Identities = 11/59 (18%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEG 133
               E+S  +G+ + V  ++   W+    + + G FP  Y++      +  A +++  G
Sbjct: 93  VEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSG-QDVSQAQRQIKRG 150

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A Length = 59

 Score = 75.3 bits (186), Expect = 2e-18
 Identities = 22/40 (55%), Positives = 25/40 (62%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           ELSF KGD+I V R  +  W+EG HN   G FP NYV  I
Sbjct: 20  ELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI 59

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 76

 Score = 74.7 bits (184), Expect = 4e-18
 Identities = 21/41 (51%), Positives = 24/41 (58%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELS  KGDII+V R  +  W+EG  N   G FP NYV  I 
Sbjct: 26  ELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIK 66

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 75.2 bits (185), Expect = 4e-18
 Identities = 21/50 (42%), Positives = 29/50 (58%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPK 128
           EL+FK G+II V    D NW++GE++  IGLFP N+V      +   A  
Sbjct: 33  ELTFKHGEIIIVLDDSDANWWKGENHRGIGLFPSNFVTTNLNIETEAAAV 82

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 74.2 bits (183), Expect = 5e-18
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPFNYVEIIP 119
           E+SF+KG+ I + RQVD+NWYEG     +  G+FP  YV++I 
Sbjct: 22  EMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIK 64

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 74.1 bits (183), Expect = 5e-18
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL    G+I+FV ++ + NW     N   GL P NY+E + 
Sbjct: 23  ELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVS 63

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 74.2 bits (183), Expect = 5e-18
 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPFNYVEIIP 119
           D   E+SF+KG+ I + RQVD+NWYEG     +  G+FP  YV++I 
Sbjct: 19  DTQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIS 65

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 74.3 bits (183), Expect = 5e-18
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           T L+ + G+++ V +      +EGE N   G FPF +V ++ 
Sbjct: 23  TALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLD 64

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 74.4 bits (183), Expect = 1e-17
 Identities = 20/41 (48%), Positives = 28/41 (68%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELSF KG +I V  + D +W++GE N + GLFP NYV++  
Sbjct: 50  ELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKMTT 90

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 51.3 bits (123), Expect = 5e-09
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query: 104 NAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVK 153
           +   G FP ++V+++     R  P      Q  A +++ A    ELS  K
Sbjct: 6   SGQKGWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSK 55

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 73.0 bits (180), Expect = 1e-17
 Identities = 18/45 (40%), Positives = 27/45 (60%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
            N  EL  K GDII V  +V++ W+EG  N   G+FP N+++ + 
Sbjct: 19  QNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELS 63

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 73.6 bits (181), Expect = 2e-17
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPYDKIRTAPKK 129
           ELSF+KG+ I + R+V++NWYEG        G+FP +YV++    ++R     
Sbjct: 33  ELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSREPRLRLCDDS 85

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 73.2 bits (180), Expect = 2e-17
 Identities = 23/41 (56%), Positives = 29/41 (70%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELSF++G II+V ++ D  WYEG  N + GLFP NYVE I 
Sbjct: 33  ELSFQEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESIS 73

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 74

 Score = 72.8 bits (179), Expect = 2e-17
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
            L+F K DII V  Q  +NW+ GE +   G FP +YV+IIP
Sbjct: 26  HLNFSKHDIITVLEQ-QENWWFGEVHGGRGWFPKSYVKIIP 65

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 72.2 bits (178), Expect = 2e-17
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD 121
           EL+FK+GD+I +  + D NW+EG+ N   G+FP NYV   PY+
Sbjct: 18  ELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVC--PYN 58

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 72.8 bits (179), Expect = 2e-17
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 78  TELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVEIIPYDKIRTAP 127
           + L FK+ DII +  +  +N W+ G+ N   G FP ++VEI+  D     P
Sbjct: 25  SLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHVEILLSDVPPPQP 75

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 72.1 bits (177), Expect = 3e-17
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
             L  KKGDII +  +     + G  N  +G F F YV+++ 
Sbjct: 26  DSLKLKKGDIIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLS 67

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens} Length = 58

 Score = 71.8 bits (177), Expect = 4e-17
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           EL F++GDII++    D NW++G      GL P NYV 
Sbjct: 19  ELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVA 56

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 72.0 bits (177), Expect = 4e-17
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           E++ KKGDI+ +    +K+W++ E N   G  P  YV+ + 
Sbjct: 21  EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLD 61

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 70.7 bits (174), Expect = 8e-17
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL F++GD I V    D NW++G  +   G+FP NYV  +
Sbjct: 18  ELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTAV 57

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 71.1 bits (175), Expect = 9e-17
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
            + T+LSF +G+ I + RQ   +W+ GE     G  P N+V    
Sbjct: 19  TDETQLSFLRGEKILILRQTTADWWWGERAGCCGYIPANHVGKHS 63

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A Length = 58

 Score = 70.7 bits (174), Expect = 1e-16
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
            EL+FK+GD I V ++    W+EGE N   G  P NYV+ I
Sbjct: 18  DELTFKEGDTIIVHQKDPAGWWEGELNGKRGWVPANYVQDI 58

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 71.2 bits (175), Expect = 1e-16
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHN---AMIGLFPFNYVEIIP 119
           DN  EL+F +G++I V  + D+ W+ G         G+FP ++V I+ 
Sbjct: 22  DNDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILS 69

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 70.4 bits (173), Expect = 1e-16
 Identities = 13/41 (31%), Positives = 25/41 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           +L  + GDII +    +++W++G+    IG FP N+V+ + 
Sbjct: 23  DLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLS 63

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 70.5 bits (173), Expect = 2e-16
 Identities = 17/44 (38%), Positives = 21/44 (47%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD 121
            E+SF   DII     +D  W+ G      GLFP NYVE+    
Sbjct: 32  DEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQSG 75

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 70.5 bits (173), Expect = 2e-16
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL+FK GD+I V    +K+W+ G+ +   G FP ++V +  
Sbjct: 26  ELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWV 66

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 69.5 bits (171), Expect = 3e-16
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
            EL+FK G++I V    D NW++GE++   GLFP N+V   
Sbjct: 20  NELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVTTD 60

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus} Length = 77

 Score = 70.3 bits (172), Expect = 3e-16
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQA 135
           E++ KKGDI+ +    +K+W++ E N   G  P  YV+ +     +     L + Q 
Sbjct: 7   EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKELVLALYDYQE 63

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 69.6 bits (171), Expect = 3e-16
 Identities = 17/41 (41%), Positives = 26/41 (63%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL  K GDII +  +V++ W+ G  N  +GLFP N+V+ + 
Sbjct: 23  ELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELE 63

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 72

 Score = 69.6 bits (171), Expect = 3e-16
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 79  ELSFKKGDIIF-VRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELSF  G +   V    +  W EG  N   GL P NYVE + 
Sbjct: 26  ELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLS 67

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus} Length = 60

 Score = 69.2 bits (170), Expect = 4e-16
 Identities = 17/44 (38%), Positives = 22/44 (50%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
            +  ELSF   DII + ++    W+ G      GLFP NYV  I
Sbjct: 17  QDTDELSFNANDIIDIIKEDPSGWWTGRLRGKQGLFPNNYVTKI 60

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens} Length = 73

 Score = 69.3 bits (170), Expect = 5e-16
 Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 2/45 (4%)

Query: 79  ELSFKKGDIIFVRRQ--VDKNWYEGEHNAMIGLFPFNYVEIIPYD 121
           EL+ K+GDI+ +  +  +D  W+EGE N   G+FP N+V+++P D
Sbjct: 25  ELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPD 69

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 73

 Score = 69.3 bits (170), Expect = 5e-16
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELS ++GD++ +  ++  D+ W++GE N  IG FP  YVE   
Sbjct: 23  ELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVEEEG 65

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 68.7 bits (169), Expect = 5e-16
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           +L  K GD + +  ++   WY+G  N   G+FP NYV+
Sbjct: 18  DLGLKPGDKVQLLEKLSPEWYKGSCNGRTGIFPANYVK 55

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 69.3 bits (170), Expect = 5e-16
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           E++ KKGDI+ +    +K+W++ E N   G  P  YV+ + 
Sbjct: 33  EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLA 73

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 69.4 bits (170), Expect = 5e-16
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELS  KG  + V  +    W+ G +N  +G FP NYV    
Sbjct: 33  ELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEG 73

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens} Length = 92

 Score = 69.4 bits (170), Expect = 6e-16
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKK 129
           EL  K GDII V  +V++ W+EG  N   G+FP N+++ +  +       +
Sbjct: 34  ELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGESDELGISQ 84

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 68.9 bits (169), Expect = 7e-16
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 74  TDNFTELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVEIIP 119
            D   EL+F  GDII V  ++D++ +Y GE N   GL P N++E + 
Sbjct: 25  VDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNFLEEVS 71

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 68.6 bits (168), Expect = 1e-15
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFVRRQVD--KNWYEGEHNAMIGLFPFNYVEIIP 119
           +L+F+ GD I V  + D   +W+EG+     G+FP NYV +  
Sbjct: 33  DLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVTMNS 75

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 70

 Score = 68.1 bits (167), Expect = 1e-15
 Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFV--RRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL+ K+GDI+ +  +  +D  W+EGE N   G+FP N+V+++ 
Sbjct: 23  ELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLS 65

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} PDB: 2d1x_A Length = 65

 Score = 68.0 bits (167), Expect = 1e-15
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
            E+SF   DII     +D  W+ G      GLFP NYVE+ 
Sbjct: 24  DEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELR 64

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 68.0 bits (167), Expect = 1e-15
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL    GDI+ V  + +  W+  E N   G  P +Y+E + 
Sbjct: 24  ELDLSAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEKLS 64

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 67.6 bits (166), Expect = 1e-15
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD 121
            N  EL  K GDII +  +V++ W+ G  N  +GLFP N+V+ +  +
Sbjct: 13  QNEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELELE 59

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 67.8 bits (166), Expect = 2e-15
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNA-----MIGLFPFNYVEIIPYDKIRTAP 127
           +LS   G +I + ++    W++GE  A       G FP ++V+++     R + 
Sbjct: 23  QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERASG 76

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 93

 Score = 68.3 bits (167), Expect = 2e-15
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 79  ELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPK 128
           E+SF  GDII V  +   +  W  G      G FP NYVE +P  +   A  
Sbjct: 21  EMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSSENEKAVS 72

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 67.3 bits (165), Expect = 2e-15
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+ KKGDI+ +    +K+W++ E N   G  P  Y++ +
Sbjct: 22  ELTVKKGDILTLLNSTNKDWWKIEVNGRQGFVPAAYLKKL 61

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 67.0 bits (164), Expect = 3e-15
 Identities = 16/59 (27%), Positives = 30/59 (50%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARA 137
           E++ KKGDI+ +    +K+W++ E N   G  P  YV+ +     +     L + Q ++
Sbjct: 15  EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGTGKELVLALYDYQEKS 73

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 81

 Score = 67.4 bits (165), Expect = 3e-15
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 78  TELSFKKGDIIFV--RRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           TELS    ++I V     +D +W  GE     G  P  Y+E++
Sbjct: 32  TELSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELL 74

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 67.0 bits (164), Expect = 4e-15
 Identities = 20/42 (47%), Positives = 26/42 (61%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
               EL+FK G+II V    D NW++GE +  IGLFP N+V 
Sbjct: 29  AEDNELTFKAGEIITVLDDSDPNWWKGETHQGIGLFPSNFVT 70

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens} Length = 58

 Score = 66.4 bits (163), Expect = 4e-15
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
            EL+   G+II   R+ D  W+EG+ N   GLFP N+V  I
Sbjct: 16  DELTISVGEIITNIRKEDGGWWEGQINGRRGLFPDNFVREI 56

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 66.5 bits (163), Expect = 4e-15
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 75  DNFTELSFKKGDIIFVRRQ---VDKNWYEGEHNAMIGLFPFNYVEIIP 119
           D   EL+F +GDI+ +  Q     + W++   +   GL P N ++I+ 
Sbjct: 19  DCSDELAFSRGDILTILEQHVPESEGWWKCLLHGRQGLAPANRLQILS 66

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 66.3 bits (162), Expect = 7e-15
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVEIIPYD 121
                L+ + GD++ V   +D   +Y GE     GL P + ++ +   
Sbjct: 26  QGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLH 73

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 65.2 bits (160), Expect = 9e-15
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL F+ G+++ V    + +W+ G  +  +GLFP NYV  +
Sbjct: 17  ELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM 56

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 66.3 bits (162), Expect = 9e-15
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 74  TDNFTELSFKKGDIIFV--RRQVDKNWYEGEHNAMIGLFPFNYVEIIPY-DKIRTAPKKL 130
           TDN + LSF +GD+I +     ++  W  G      GLFP + V+     D   +  ++ 
Sbjct: 19  TDNCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGLFPADIVQPAAAPDFSFSKEQRS 78

Query: 131 SEGQA 135
             G +
Sbjct: 79  GSGPS 83

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A Length = 69

 Score = 65.4 bits (160), Expect = 1e-14
 Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFV--RRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL+ K+GDI+ +  +  +D  W+EGE N   G+FP N+V+++P
Sbjct: 18  ELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLP 60

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 65.4 bits (160), Expect = 1e-14
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMI-GLFPFNYVEII 118
            EL+F +G +I    +    W++G++   I   FP NYVE I
Sbjct: 22  DELTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDI 63

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 64.9 bits (159), Expect = 1e-14
 Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVD--KNWYEGEHNAMIGLFPFNYVEII 118
           +L F+KGD+I + ++ D   +W+ G  N   G+FP NYVE++
Sbjct: 19  DLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV 60

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 64.9 bits (159), Expect = 2e-14
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIP 119
           EL  +KG+ I V  +    W +G        G+FP +YV  + 
Sbjct: 23  ELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVS 65

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A Length = 108

 Score = 66.0 bits (161), Expect = 2e-14
 Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 10/91 (10%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNA---MIGLFPFNYVEIIPYDKIRTAPKKLSEGQA 135
           EL+   G+ +F+    +  W+  +        GL P  +V II           + E   
Sbjct: 21  ELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIIDIATGYATGNDVIEDIK 80

Query: 136 RAKFNFVAQTHLELSLVKESPHKYVDSEVTL 166
                 V +        K +  +Y  S ++L
Sbjct: 81  SVNLPTVQEW-------KSNIARYKASNISL 104

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 65.0 bits (159), Expect = 2e-14
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 79  ELSFKKGDIIFV---RRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELSF +G II +     Q D  ++EGE N  IG+FP   VE + 
Sbjct: 24  ELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEELS 67

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 65.0 bits (159), Expect = 2e-14
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEG--EHNAMIGLFPFNYVEIIP 119
           EL  ++GD + V +Q D  W+ G        G FP NYV  + 
Sbjct: 23  ELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVS 65

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 63.8 bits (156), Expect = 4e-14
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEII 118
           EL+F + D I     VD +W+ GE   +   GLFP NYV + 
Sbjct: 16  ELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG 57

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A Length = 71

 Score = 64.2 bits (157), Expect = 4e-14
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGL-FPFNYVEIIP 119
            EL+F K  II    + +  W+ G++     L FP NYVE + 
Sbjct: 21  DELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMV 63

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 63.8 bits (156), Expect = 5e-14
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNA--MIGLFPFNYVEII 118
            +  E+SF+ GD I   + +D  W  G        G+ P NY+E +
Sbjct: 18  QDEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFV 63

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens} Length = 69

 Score = 63.5 bits (155), Expect = 6e-14
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 79  ELSFKKGDIIFVRRQVDKN---WYEGEHNAMIGLFPFNYVEIIP 119
           ELSF+KGDI+ V  Q  +    W+    +   G+ P N ++I+ 
Sbjct: 19  ELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIVPGNRLKILV 62

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 96

 Score = 64.2 bits (156), Expect = 7e-14
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKN-WYEGEH-NAMIGLFPFNYVEIIPYDKIRTAPKKLS 131
           +   EL    G  ++V   +D++ +YEGE  +   GL P N+V+ +  ++ R A     
Sbjct: 35  NPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRLASTSGP 93

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A Length = 64

 Score = 63.0 bits (154), Expect = 8e-14
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFV--RRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL+F++G+II +  +   +  W++GE N   G+FP N+   I
Sbjct: 22  ELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQI 63

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 62.6 bits (153), Expect = 1e-13
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           EL   +GDI+F+  +  + W   E+   +  GL P  +V  I
Sbjct: 17  ELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYI 58

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1 Length = 72

 Score = 63.1 bits (154), Expect = 1e-13
 Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 6/65 (9%)

Query: 58  RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKN-WYEGEH--NAMIGLFPFNY 114
             + ++ +   ++  +      LSF +GD++ +    +K+ W  GEH      G FP +Y
Sbjct: 6   SGQKVKTIFPHTAGNNKT---LLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSY 62

Query: 115 VEIIP 119
            +++ 
Sbjct: 63  TKLLS 67

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A Length = 61

 Score = 62.6 bits (153), Expect = 1e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGL-FPFNYVEIIP 119
            EL+F K  II    + D  W+ G++     L FP NYVE + 
Sbjct: 18  DELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEEMI 60

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} Length = 67

 Score = 62.7 bits (153), Expect = 1e-13
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 75  DNFTELSFKKGDIIFV-RRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           DN T LSFK+GD+I +   +    W+ GE     M G FPF+Y  ++
Sbjct: 20  DNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVL 66

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A Length = 68

 Score = 62.7 bits (153), Expect = 1e-13
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 5/44 (11%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHN-----AMIGLFPFNYVEI 117
           +L+F+K   I V    D  WY GE+       + G+FP ++V +
Sbjct: 23  DLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVAV 66

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 63.4 bits (154), Expect = 1e-13
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 65  LHDISSRRHTDNFT----ELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVEIIP 119
           L D      + N      EL FK+G II V    D + +Y GE  A +GL P N V  I 
Sbjct: 23  LFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQ 82

Query: 120 YDKIRTAPK 128
            D      +
Sbjct: 83  ADDEEMMDQ 91

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens} Length = 67

 Score = 62.3 bits (152), Expect = 2e-13
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 75  DNFTELSFKKGDIIFV-RRQVDKNWYEGEH--NAMIGLFPFNYVEIIP 119
            N T LSF +GD+I +   +    W  GEH  +   G FP +Y +++ 
Sbjct: 19  SNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLLE 66

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 61.9 bits (151), Expect = 2e-13
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIP 119
            +L FKKGDI+ +R + ++ W+  E      G+ P  YVE   
Sbjct: 18  EDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYH 60

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 61.8 bits (151), Expect = 2e-13
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 78  TELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVE 116
            E+S   GDII V R  D + W  GE + + GLFP +Y +
Sbjct: 15  DEISIDPGDIITVIRGDDGSGWTYGECDGLKGLFPTSYCK 54

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 61.4 bits (150), Expect = 3e-13
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIPY 120
            +L FKKGDI+ +R + ++ W+  E      G+ P  YVE   Y
Sbjct: 16  EDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVE--KY 57

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens} Length = 83

 Score = 61.8 bits (150), Expect = 4e-13
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 6/51 (11%)

Query: 74  TDNFTELSFKKGDIIFVRRQVDKNWYEGEHN------AMIGLFPFNYVEII 118
             + T L+ + GD+I V  Q     ++G  +        IG FP   VE++
Sbjct: 30  LHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEVV 80

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 61.1 bits (149), Expect = 5e-13
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
            +L+F +G+ I V  Q D  W+ G      G+FP NYV+  
Sbjct: 23  GDLTFTEGEEILVT-QKDGEWWTGSIGDRSGIFPSNYVKPK 62

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A Length = 62

 Score = 60.7 bits (148), Expect = 6e-13
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 79  ELSFKKGDIIFVRRQVDK-NWYEGEHNAMIGLFPFNYVEIIPYD 121
           EL+ + G+II   +++ +  W EGE N   G+FP N+V+ I  +
Sbjct: 17  ELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIKRE 60

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 60.8 bits (148), Expect = 6e-13
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           +ELS + G+++ V  + +  W+    +   G  P  Y+E   
Sbjct: 23  SELSLQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQN 64

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus} Length = 93

 Score = 61.3 bits (149), Expect = 9e-13
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 79  ELSFKKGDIIFVRRQVDKN----WYEGE-HNAMIGLFPFNYVEIIPYDKIRTAPK 128
           E+SF+ GD++ +  +  +     W          GL P NYV+I+   + R   +
Sbjct: 33  EISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKRRGRKTIE 87

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 65.2 bits (158), Expect = 9e-13
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 73  HTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           +  + T+L  KKG  + V +++    Y+ E +  IG  P  Y+    
Sbjct: 259 NAYDPTQLRVKKGQTVLVTQKMSNGMYKAELDGQIGSVPHTYLRFTA 305

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 57.5 bits (138), Expect = 4e-10
 Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARA 137
           +L F++G+ + +  + +++W+E  +     GL P NYV+I          K  S+    +
Sbjct: 163 DLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQMEFHNDRTSKGASQSSIGS 222

Query: 138 KFNFVAQTHLELSLVKESPH--KYVDSEVTLQYRRPVRNEIKEL 179
                 +     +         +          R P   +  +L
Sbjct: 223 SGGGAERFSSASTSSDNIELQPRLPAKAKVTFDRVPNAYDPTQL 266

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 44.8 bits (105), Expect = 7e-06
 Identities = 12/91 (13%), Positives = 23/91 (25%), Gaps = 10/91 (10%)

Query: 70  SRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFP-------FNYVEIIPYDK 122
           + R  D   E +     +I      +              FP          + ++    
Sbjct: 81  TVREAD---EGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTEAS 137

Query: 123 IRTAPKKLSEGQARAKFNFVAQTHLELSLVK 153
           +  A KK         F F  +   +L   +
Sbjct: 138 LLAAYKKPIIEVVVGTFKFTGERETDLPFEQ 168

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 60.4 bits (147), Expect = 1e-12
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIP 119
           E++ ++ D++ V +Q D  W  GE   +   G FP ++   I 
Sbjct: 33  EVTLQQADVVLVLQQED-GWLYGERLRDGETGWFPEDFARFIS 74

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 60.4 bits (147), Expect = 1e-12
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIP 119
           EL   +GDI+F+  +  + W   E+   +  GL P  +V  I 
Sbjct: 21  ELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 63

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 60.0 bits (146), Expect = 1e-12
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIP 119
           EL+  +GDII V  + +++W+ G       G FP N+V    
Sbjct: 22  ELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASET 63

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 60.0 bits (146), Expect = 2e-12
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 75  DNFTELSFKKGDIIFV-RRQVDKNWYEGEHNA-MIGLFPFNYVEIIP 119
               EL+  +G+II V    V   W EG++N    GL P +YVEI+P
Sbjct: 22  PGNNELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEILP 68

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus} Length = 142

 Score = 61.2 bits (148), Expect = 2e-12
 Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 10/114 (8%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARA 137
           ELS K+GDII +  ++  + W+ GE    IG FP NYVE         +      G    
Sbjct: 21  ELSLKEGDIIKILNKKGQQGWWRGEIYGRIGWFPSNYVEEDY------SEYLPETGGGSG 74

Query: 138 KFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEELARRQAE 191
                       +L  E+  + VD+       +  +    +   + E     A 
Sbjct: 75  SSMTYKLILNGKTLKGETTTEAVDAA---TAEKVFKQYANDNGVDGEWTYDDAT 125

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 59.2 bits (144), Expect = 2e-12
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 65  LHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           +   +    TD   E+SF KGD+  V  +++  W    +      GL   + VE +
Sbjct: 13  ILPYTKVPDTD---EISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEV 65

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 59.7 bits (145), Expect = 2e-12
 Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNA--MIGLFPFNYVE 116
           EL+F+KGD++ +     +K+WY  +H+     GL     + 
Sbjct: 33  ELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALR 73

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 59.2 bits (144), Expect = 3e-12
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           E+ F+KG  + V R+  + W+   +    G  P +Y++
Sbjct: 24  EIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLK 61

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A* Length = 62

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 5/50 (10%)

Query: 72  RHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIP 119
           RH D   EL  +  D + V  Q +  WYE         G+FP  Y   + 
Sbjct: 15  RHED---ELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVT 61

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus} Length = 71

 Score = 58.8 bits (143), Expect = 4e-12
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 5/52 (9%)

Query: 72  RHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIPYD 121
           RH D   EL  +  D + V  Q +  WYE         G+FP  Y   +  +
Sbjct: 18  RHED---ELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTKE 66

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 63.1 bits (152), Expect = 4e-12
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 73  HTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           +  + T L+ + G+++ V +      +EGE N   G FPF +V ++ 
Sbjct: 249 NAYDKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLD 295

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 51.9 bits (123), Expect = 4e-08
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIPYDKIRTAPK 128
           +L FKKGDI+ +R + ++ W+  E      G+ P  YVE         +  
Sbjct: 150 DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSAL 200

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 58.7 bits (142), Expect = 6e-12
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARA 137
           E+SF  G  + V  + +  W+      + G  P +Y+     +  +  P     G +  
Sbjct: 24  EISFPAGVEVQVLEKQESGWWYVRFGELEGWAPSHYLV--LDENEQPDPSGKESGPSSG 80

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D Length = 60

 Score = 58.0 bits (141), Expect = 6e-12
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 78  TELSFKKGDIIFVRRQVD-KNWYEGE-HNAMIGLFPFNYVEII 118
            ELSFK GD +    + D + W  G   +  +GL+P NYVE I
Sbjct: 18  DELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI 60

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 58.1 bits (141), Expect = 7e-12
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           +LSF KG+   +    + +W+E         G  P NYV  +
Sbjct: 31  DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV 72

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 61.6 bits (148), Expect = 2e-11
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           T L+ + GDI+ V R      +EGE N   GLFPF +V+I  
Sbjct: 254 TALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFD 295

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 48.1 bits (113), Expect = 5e-07
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIPYD 121
           +L FKKG+I+ +  + ++ W+   + +  +G+ P  YVE +   
Sbjct: 141 DLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRS 184

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens} Length = 341

 Score = 61.5 bits (148), Expect = 2e-11
 Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 11/118 (9%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII-PYDKIRTAPKKLSEGQAR 136
            EL+FK GD+IF+  +++K+W EG      G+FP ++V+I+  + +       L      
Sbjct: 189 LELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWLRCYYYE 248

Query: 137 AKFNFVAQTHLELSLVKESPHK---------YVDSEVTLQYRRPVRNEIKELISEEEL 185
              + +    +E  L      K         +   ++ L YR    + +  L+S+E++
Sbjct: 249 DTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLV-RLLSDEDV 305

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 56.5 bits (137), Expect = 2e-11
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 7/58 (12%)

Query: 65  LHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIPY 120
            +D           EL  KKGD+I++ R+    W  G+    +  G  P  Y++  P+
Sbjct: 6   AYDFPGSGSPS---ELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMK--PH 58

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 55.7 bits (135), Expect = 6e-11
 Identities = 10/44 (22%), Positives = 17/44 (38%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           N  EL+  +G+ + V     + W         G  P N +E + 
Sbjct: 20  NPRELTVVQGEKLEVLDHSKRWWLVKNEAGRSGYIPSNILEPLS 63

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A Length = 58

 Score = 55.2 bits (133), Expect = 7e-11
 Identities = 15/40 (37%), Positives = 18/40 (45%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           ELS   G  + V       W+ G +N  IG FP NYV   
Sbjct: 17  ELSLVXGSRVTVMEXCSDGWWRGSYNGQIGWFPSNYVLEE 56

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 55.3 bits (134), Expect = 8e-11
 Identities = 10/44 (22%), Positives = 16/44 (36%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           N  ELS  K +++ V     + W     +   G  P N +    
Sbjct: 20  NANELSVLKDEVLEVLEDGRQWWKLRSRSGQAGYVPCNILGEAS 63

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 55.0 bits (133), Expect = 8e-11
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIP 119
           D+  E+SF++ +I+ V   ++  W++    N   G+ P NYV++I 
Sbjct: 19  DDAYEISFEQNEILQV-SDIEGRWWKARRANGETGIIPSNYVQLID 63

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 79

 Score = 55.1 bits (133), Expect = 1e-10
 Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 4/45 (8%)

Query: 79  ELSFKKGDIIFVRRQVD----KNWYEGEHNAMIGLFPFNYVEIIP 119
           ELS      + +    D      W+  E N   G  P NY+    
Sbjct: 29  ELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE 73

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 55.2 bits (133), Expect = 1e-10
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 79  ELSFKKGDIIFV--RRQVDKNWYEGEH-NAMIGLFPFNYVEIIP 119
           EL+F+KG+ + V  + + D  W++ ++    +GL P NYV ++ 
Sbjct: 33  ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS 76

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 74  TDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEII 118
           + + +EL  KKGDI+F+ R     W   +    +  G  P  Y+   
Sbjct: 14  SGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPY 60

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A Length = 71

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 79  ELSFKKGDIIFV--RRQVDKNWYEGEH-NAMIGLFPFNYVEIIP 119
           EL+F+KG+ + V  + + D  W++ ++    +GL P NYV ++ 
Sbjct: 22  ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS 65

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A Length = 60

 Score = 53.7 bits (130), Expect = 2e-10
 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           EL+ K GD +++   +  K+W+  +   +   GL P  ++E +
Sbjct: 18  ELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV 60

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 53.7 bits (130), Expect = 3e-10
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 65  LHDISSRRHTDNFTELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           L+D  +         LS  KG+ + V     +  W E +     G  P  Y+  +
Sbjct: 11  LYDFVASGDN----TLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPV 61

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens} Length = 89

 Score = 54.1 bits (130), Expect = 3e-10
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 6/45 (13%)

Query: 78  TELSFKKGDIIFV-----RRQVDKNWYEGE-HNAMIGLFPFNYVE 116
            EL+ ++GD + V         D+ W+ G+  +  +G+FP NYV 
Sbjct: 44  EELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVA 88

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94

 Score = 54.0 bits (130), Expect = 4e-10
 Identities = 13/56 (23%), Positives = 16/56 (28%), Gaps = 6/56 (10%)

Query: 79  ELSFKKGDIIFVRR----QVDKNWYEG--EHNAMIGLFPFNYVEIIPYDKIRTAPK 128
           EL    GD IF+         + W  G        GL P NY+             
Sbjct: 32  ELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADECSTWIFHG 87

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 53.5 bits (129), Expect = 4e-10
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 6/47 (12%)

Query: 78  TELSFKKGDIIFVRRQVD-----KNWYEGE-HNAMIGLFPFNYVEII 118
            E++ KKGD++ +  + D      +W++    N  IG  P+NY+EII
Sbjct: 23  MEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII 69

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus} Length = 120

 Score = 54.9 bits (132), Expect = 4e-10
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 3/43 (6%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNA---MIGLFPFNYVEII 118
           EL    G+ + +    D  W+  +        GL P +YV II
Sbjct: 19  ELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRII 61

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 53.4 bits (129), Expect = 4e-10
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNA-MIGLFPFNYVE 116
           +L F KGD++ +     D NWY+ ++     G+ P NYV+
Sbjct: 27  DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQ 66

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 53.0 bits (128), Expect = 5e-10
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIPYDK 122
           +L+FKKG+I+ V  +    W+  +      GL P  Y+E  PY +
Sbjct: 26  DLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLE--PYSE 68

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 53.0 bits (128), Expect = 5e-10
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVE 116
           +L  +KGD  F+  + +  W+     N   G  P NYV 
Sbjct: 24  DLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVT 62

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 52.8 bits (127), Expect = 7e-10
 Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 9/47 (19%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH---------NAMIGLFPFNYVE 116
           +LSF+ GD + V     + W+   H           + G  P NYV 
Sbjct: 23  DLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVA 69

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 53.2 bits (128), Expect = 7e-10
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           +LSF KG+   +      +W+E         G  P NYV  +
Sbjct: 22  DLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPV 63

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 52.2 bits (126), Expect = 9e-10
 Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIP 119
           +L  ++G    +  + D +W+         G  P NYV    
Sbjct: 18  DLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKK 59

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           +LSF KG+   +    + +W+E         G  P  Y+  +
Sbjct: 21  DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPV 62

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 52.0 bits (125), Expect = 1e-09
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 8/48 (16%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAM--------IGLFPFNYVEII 118
           E++ KKGDI+ +    +K+W++ E             G  P  YV+ +
Sbjct: 17  EVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVKKL 64

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae} Length = 71

 Score = 51.9 bits (125), Expect = 1e-09
 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           EL+ K GD +++   +  K+W+  +   +   GL P  ++E +
Sbjct: 22  ELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV 64

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 51.7 bits (124), Expect = 2e-09
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           E+SF KGD+  V  +++  W    +      GL   + VE +
Sbjct: 22  EISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEV 63

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 50.9 bits (122), Expect = 4e-09
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 6/48 (12%)

Query: 78  TELSFKKGDIIFVRRQVD-----KNWYEGE-HNAMIGLFPFNYVEIIP 119
            E++ KKGD++ +  + D      +W++    N  IG  P+NY+EII 
Sbjct: 30  MEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIK 77

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 50.8 bits (122), Expect = 4e-09
 Identities = 7/46 (15%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIPYDKI 123
           EL+ ++ +   +    + +W+  +  N   G  P +Y+     + +
Sbjct: 35  ELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEKSPNNL 80

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 72

 Score = 50.5 bits (121), Expect = 5e-09
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMI-----GLFPFNYVE 116
           ELSF+ GD+  V R+ ++ W+    +        G  P NY+ 
Sbjct: 26  ELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLA 68

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 50.6 bits (121), Expect = 7e-09
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 6/48 (12%)

Query: 78  TELSFKKGDIIFV-----RRQVDKNWYEGE-HNAMIGLFPFNYVEIIP 119
            E++ KKGD++ +         D +W++    N  IG  P+NY+EII 
Sbjct: 30  MEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIK 77

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 52.8 bits (126), Expect = 1e-08
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL F++GD I V    D NW++G  +   G+FP NYV  +
Sbjct: 174 ELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPV 213

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A Length = 217

 Score = 50.8 bits (121), Expect = 5e-08
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARA 137
           ELSFK+GDI+ V   + D+NWY+ E N   G  P NY+E+ P+             +A+A
Sbjct: 16  ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHP-----WFFGKIPRAKA 70

Query: 138 KFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR 173
           +     Q H    L++ES     D  +++++   V+
Sbjct: 71  EEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQ 106

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B Length = 115

 Score = 50.9 bits (121), Expect = 1e-08
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 15/55 (27%)

Query: 79  ELSFKKGDIIFV-----RRQVDKNWYEG----------EHNAMIGLFPFNYVEII 118
           EL  K GD++ V       + D+ W  G          E     G+FP N+ E +
Sbjct: 60  ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV 114

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.3 bits (118), Expect = 1e-08
 Identities = 8/43 (18%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFVRRQVD-KNWYEGE-HNAMIGLFPFNYVEIIP 119
           EL+ ++ +++ V    D ++W +       +G  P  Y++   
Sbjct: 29  ELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPT 71

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 50.2 bits (120), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNA--MIGLFPFNYVEII 118
           +LSFKKG+   +    + +W+E    A    G  P NYV   
Sbjct: 43  DLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPA 84

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 51.7 bits (123), Expect = 1e-08
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEI 117
           T+L F++G+ + +  + +++W+E  +     GL P NYV+I
Sbjct: 133 TDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI 173

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 51.8 bits (123), Expect = 2e-08
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARA 137
           +L FKKGDI+ +R + ++ W+  E      G+ P  YVE   Y     +   L  G    
Sbjct: 152 DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVE--KYRPASASVSALIGGNQEG 209

Query: 138 KFN 140
              
Sbjct: 210 SHP 212

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 49.0 bits (117), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           +LSF+KGD + V  +    W++         G  P NYV  +
Sbjct: 41  DLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARV 81

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens} Length = 119

 Score = 49.7 bits (118), Expect = 3e-08
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 4/45 (8%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEG---EHNAMIGLFPFNYVEIIPY 120
           +LS + GD++ ++     +WY G   +H  + G+FP +++ I   
Sbjct: 75  QLSLQIGDVVRIQET-CGDWYRGYLIKHKMLQGIFPKSFIHIKEV 118

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 6/43 (13%), Positives = 14/43 (32%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGE-HNAMIGLFPFNYVEIIP 119
            +S  +G+ + +        W          G  P +Y+ +  
Sbjct: 23  TISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTS 65

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A Length = 62

 Score = 47.8 bits (114), Expect = 4e-08
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHN 104
           E++ KKGDI+ +    +K+W++ E N
Sbjct: 37  EVTMKKGDILTLLNSTNKDWWKVEVN 62

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 47.4 bits (113), Expect = 7e-08
 Identities = 7/39 (17%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVE 116
           EL+ +  +  ++    + +W+  +  N   G  P +Y+ 
Sbjct: 36  ELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 74

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1 Length = 78

 Score = 47.7 bits (113), Expect = 7e-08
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 45  QAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTELSFKKGDII-FVRRQVDKNWYEGEH 103
           +A+  +R      + +  QE + I           L    GDI+   + + + NW+EG +
Sbjct: 1   RAQDKKRNELGLPKMEVFQEYYGIPPPPGAFG-GFLRLNPGDIVELTKAEAEHNWWEGRN 59

Query: 104 --NAMIGLFPFNYVEIIPY 120
                +G FP N V   PY
Sbjct: 60  TATNEVGWFPCNRVH--PY 76

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A Length = 70

 Score = 47.3 bits (112), Expect = 7e-08
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 5/46 (10%)

Query: 78  TELSFKKGDIIFV-RRQVDKNWYEGEH--NAMIGLFPFNYVEIIPY 120
             L    GDI+ + + + + NW+EG +     +G FP N V   PY
Sbjct: 25  PFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVH--PY 68

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 75

 Score = 47.1 bits (112), Expect = 8e-08
 Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 4/44 (9%)

Query: 79  ELSFKKGDIIFVRRQVDKNW----YEGEHNAMIGLFPFNYVEII 118
              F++G  + V  +    W             G  P NY+E  
Sbjct: 25  TAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKK 68

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} PDB: 2kt1_A Length = 90

 Score = 46.1 bits (109), Expect = 3e-07
 Identities = 14/58 (24%), Positives = 18/58 (31%), Gaps = 17/58 (29%)

Query: 79  ELSFKKGDIIFV---------------RRQVDKNWYEG--EHNAMIGLFPFNYVEIIP 119
           +L    GD++ V               R      W  G  E     G FP  YVE + 
Sbjct: 27  DLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLG 84

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 58

 Score = 44.8 bits (107), Expect = 4e-07
 Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 3/42 (7%)

Query: 79  ELSFKKGDIIFVRRQVDKNW---YEGEHNAMIGLFPFNYVEI 117
           E++   GD I +  +   +       +     GL P  Y+ I
Sbjct: 17  EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 58

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           N +ELS K+ D++ V     K W   +     G  P+N +   P
Sbjct: 21  NSSELSVKQRDVLEVLDDSRKWWKVRDPAGQEGYVPYNILTPYP 64

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 213

 Score = 47.8 bits (112), Expect = 5e-07
 Identities = 25/132 (18%), Positives = 39/132 (29%), Gaps = 21/132 (15%)

Query: 3   SPIQTTDNRPNSIVDSEVTLQYRRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYL 62
           +        P     SE       P         +        + A R         K  
Sbjct: 88  TQPAAGAQEPGETAASEAA-SSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKV- 145

Query: 63  QELHDISSRRHTDNFTELSFKKGDIIFV-----RRQVDKNWYEG----------EHNAMI 107
           Q  HD ++     +  EL  K GD++ V       + D+ W  G          +     
Sbjct: 146 QAQHDYTA----TDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCR 201

Query: 108 GLFPFNYVEIIP 119
           G+FP N+ E +P
Sbjct: 202 GVFPENFTERVP 213

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 44.2 bits (105), Expect = 6e-07
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWY-EGEHNAMIGLFPFNYVE 116
           +L F+KG+ + +  Q  + W  +       G  PFN+V 
Sbjct: 22  DLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVA 60

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 43.6 bits (103), Expect = 2e-06
 Identities = 6/41 (14%), Positives = 15/41 (36%), Gaps = 3/41 (7%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAM--IGLFPFNYVE 116
           +   F++G+ + V    +  W++    +       P   V 
Sbjct: 32  SPPIFRRGEKLRVISD-EGGWWKAISLSTGRESYIPGICVA 71

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens} Length = 72

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 76  NFTELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIP 119
              EL  KK + +++     K+W+   +     G  P NYVE   
Sbjct: 20  QEQELDIKKNERLWLLDD-SKSWWRVRNSMNKTGFVPSNYVERKN 63

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A Length = 60

 Score = 41.9 bits (99), Expect = 5e-06
 Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 59  RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEI 117
           +KY +  +D  +R    N +ELS  K D++ +       W++  + +   G  P N ++I
Sbjct: 1   KKYAKSKYDFVAR----NSSELSVMKDDVLEILDDRR-QWWKVRNASGDSGFVPNNILDI 55

Query: 118 IP 119
           + 
Sbjct: 56  MR 57

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 8e-06
 Identities = 36/253 (14%), Positives = 80/253 (31%), Gaps = 48/253 (18%)

Query: 9   DNRPNSIVDSEV--TLQYRRPV--RNEIKELI---SEEELARRQAEAMRRIYQEERRRKY 61
                 + + +        + +  + EI  +I          R    +    QEE  +K+
Sbjct: 24  VFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLS-KQEEMVQKF 82

Query: 62  LQELHDISSRRHTDNFTEL--SFKKGDIIFVRRQVDKNWYEGEHNAMIG---LF-PFNYV 115
           ++E+          N+  L    K       +  +    Y  + + +     +F  +N  
Sbjct: 83  VEEVLR-------INYKFLMSPIKTEQR---QPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132

Query: 116 EIIPYDKIRTAPKKLSEGQ----------------ARAKFNFVAQTHLE-----LSLVK- 153
            + PY K+R A  +L   +                     ++  Q  ++     L+L   
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC 192

Query: 154 ESPHKYVDSEVTLQYR-RPVRNEIKELISEEELARRQA-EAMRRIYQEERRRKYLQELHD 211
            SP   ++    L Y+  P      +  S  +L        +RR+ + +     L  L +
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 212 ISSRRHTDNFTYR 224
           + + +  + F   
Sbjct: 253 VQNAKAWNAFNLS 265

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQA 135
           +LSF+KGD + V  +    W++         G  P NYV  +      +   +    QA
Sbjct: 19  DLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVDSGGGTSGGGRHRRRQA 76

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486

 Score = 44.4 bits (103), Expect = 1e-05
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVD-KNWYEGE-HNAMIGLFPFNYVEII 118
           ELSFK GD +      D + W +G   N  +GL+P NYVE I
Sbjct: 444 ELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPANYVEAI 485

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A Length = 67

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVE 116
           EL  KK + +++     K W+   +     G  P NYVE
Sbjct: 20  ELDIKKNERLWLLDD-SKTWWRVRNAANRTGYVPSNYVE 57

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} Length = 86

 Score = 39.4 bits (92), Expect = 8e-05
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           EL  KK + +++       W         G  P NYVE
Sbjct: 47  ELDIKKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVE 84

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D Length = 466

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           EL FK GD+I V    ++ W+ G      G FP ++V +  
Sbjct: 46  ELGFKAGDVIEVMDATNREWWWGRVADGEGWFPASFVRLRV 86

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} Length = 184

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE---HNAMIGLFPFNYVEIIP 119
           +LS + GD++ ++     +WY G    H  + G+FP +++ I  
Sbjct: 33  QLSLQIGDVVRIQET-CGDWYRGYLIKHKMLQGIFPKSFIHIKE 75

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A Length = 108

 Score = 38.1 bits (88), Expect = 4e-04
 Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 11/52 (21%)

Query: 78  TELSFKKGDIIFVRRQ---VDKNWYEGE--------HNAMIGLFPFNYVEII 118
             L+  +G +++V  +     + ++ G           A +G FP + V   
Sbjct: 37  RFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVRED 88

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Length = 526

 Score = 39.8 bits (92), Expect = 4e-04
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIP 119
           E+  + GDII V       + +G +      GL+P   V    
Sbjct: 458 EIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKI 500

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	225
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.84
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.78
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.75
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.73
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	99.72
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.56
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	99.71
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	99.69
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	99.68
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	99.68
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	99.67
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.67
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	99.67
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	99.66
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	99.66
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	99.66
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	99.66
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	99.66
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	99.66
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	99.66
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	99.65
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	99.65
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	99.65
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	99.65
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	99.65
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	99.64
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	99.64
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	99.64
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	99.64
3u23_A	65	CD2-associated protein; structural genomics, struc	99.64
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	99.64
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	99.64
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	99.64
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	99.64
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	99.64
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	99.64
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	99.64
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	99.64
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	99.64
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.64
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	99.64
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	99.64
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	99.63
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	99.63
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	99.63
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	99.63
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	99.63
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.63
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	99.63
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	99.63
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	99.63
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	99.63
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	99.63
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	99.63
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	99.63
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	99.62
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	99.62
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	99.62
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	99.62
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	99.62
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	99.62
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	99.62
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	99.62
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	99.62
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	99.62
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	99.62
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	99.62
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	99.61
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	99.61
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.61
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	99.61
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	99.61
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	99.61
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	99.61
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	99.61
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	99.61
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	99.61
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	99.61
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	99.61
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	99.6
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	99.6
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	99.6
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	99.6
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	99.6
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	99.6
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	99.6
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	99.6
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	99.6
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	99.6
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	99.6
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	99.6
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	99.6
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	99.6
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	99.6
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	99.6
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	99.6
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	99.6
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	99.59
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	99.59
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	99.59
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.59
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	99.59
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	99.59
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	99.59
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	99.59
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	99.59
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.59
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	99.58
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	99.58
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.58
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	99.58
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	99.58
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	99.58
1i07_A	60	Epidermal growth factor receptor kinase substrate	99.58
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	99.58
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.58
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	99.58
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	99.58
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	99.58
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	99.58
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	99.58
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	99.58
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	99.58
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	99.58
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	99.57
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	99.57
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	99.57
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	99.57
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	99.56
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	99.56
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	99.56
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	99.56
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	99.56
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	99.56
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	99.56
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	99.56
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	99.56
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	99.56
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	99.56
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	99.55
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	99.55
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.55
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	99.55
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	99.55
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.55
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	99.54
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	99.54
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	99.54
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	99.54
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	99.53
1wxb_A	68	Epidermal growth factor receptor pathway substrate	99.53
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	99.53
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	99.53
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	99.53
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	99.52
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	99.52
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.52
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	99.52
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	99.51
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	99.51
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	99.51
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.51
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	99.51
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	99.51
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	99.5
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	99.5
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.5
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	99.49
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	99.48
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	99.48
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	99.47
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	99.47
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	99.47
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	99.47
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.47
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	99.46
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	99.46
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	99.45
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	99.45
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.43
1awj_A	77	ITK; transferase, regulatory intramolecular comple	99.41
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	99.4
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.4
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	99.4
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.4
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.36
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	99.35
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	99.31
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.3
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	99.29
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.27
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	99.25
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	98.82
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	99.17
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	99.17
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	99.16
1u3o_A	82	Huntingtin-associated protein-interacting protein;	99.14
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.11
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	99.05
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	99.01
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	98.98
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	98.86
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	98.86
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	98.84
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	98.69
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	98.62
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	98.56
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	98.56
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	98.54
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	98.51
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	98.46
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	98.43
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	98.32
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	98.3
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	98.15
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	98.08
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	98.01
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	98.01
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	98.0
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	98.0
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	97.99
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	97.99
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	97.98
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	97.97
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	97.97
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	97.97
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	97.96
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	97.96
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	97.95
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	97.95
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	97.95
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	97.95
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	97.94
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	97.93
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	97.93
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	97.93
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	97.93
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	97.91
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	97.91
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	97.9
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	97.9
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	97.9
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	97.89
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	97.89
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	97.89
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	97.89
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	97.88
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	97.88
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	97.88
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	97.88
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	97.87
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	97.87
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	97.87
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	97.87
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	97.86
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	97.86
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	97.86
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	97.85
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	97.85
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	97.85
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	97.85
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	97.85
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	97.85
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	97.85
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	97.85
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	97.85
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	97.84
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	97.84
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	97.84
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	97.84
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	97.84
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	97.84
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	97.84
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	97.83
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	97.83
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	97.83
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	97.83
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	97.83
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	97.82
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	97.82
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	97.82
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	97.81
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	97.81
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	97.81
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	97.8
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	97.8
3u23_A	65	CD2-associated protein; structural genomics, struc	97.8
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	97.8
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	97.8
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	97.8
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	97.79
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	97.78
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	97.78
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	97.78
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	97.78
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	97.78
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	97.78
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	97.77
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	97.77
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	97.77
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	97.77
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	97.77
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	97.77
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	97.76
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	97.76
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	97.76
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	97.75
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	97.75
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	97.75
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	97.75
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	97.75
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	97.75
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	97.75
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	97.75
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	97.74
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	97.74
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	97.74
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	97.74
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	97.73
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	97.73
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	97.72
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	97.72
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	97.72
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	97.72
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	97.72
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	97.71
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	97.71
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	97.71
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	97.71
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	97.71
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	97.71
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	97.71
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	97.7
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	97.7
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	97.7
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	97.69
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	97.69
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	97.69
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	97.69
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	97.68
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	97.68
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	97.68
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	97.68
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	97.67
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	97.67
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	97.66
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	97.66
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	97.66
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	97.66
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	97.66
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	97.65
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	97.65
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	97.64
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	97.63
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	97.63
1i07_A	60	Epidermal growth factor receptor kinase substrate	97.62
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	97.61
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	97.58
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	97.58
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	97.58
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	97.58
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	97.54
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	97.54
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	97.53
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	97.52
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	97.52
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	97.52
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	97.51
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	97.5
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	97.49
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	97.48
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	97.47
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	97.45
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	97.45
1awj_A	77	ITK; transferase, regulatory intramolecular comple	97.45
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	97.44
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	97.4
1wxb_A	68	Epidermal growth factor receptor pathway substrate	97.39
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	97.39
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	97.38
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	97.28
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	97.24
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	97.22
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	97.21
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	97.18
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	97.15
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	96.96
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	96.95
2cr4_A	126	3BP-2, SH3 domain-binding protein 2; structural ge	96.89
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	96.89
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	96.78
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	96.67
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	96.67
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	96.57
1u3o_A	82	Huntingtin-associated protein-interacting protein;	96.53
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	96.51
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	96.33
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	96.32
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	96.31
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	96.25
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	96.13
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	96.13
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	95.84
1wqu_A	114	C-FES, proto-oncogene tyrosine-protein kinase FES/	95.71
2kt8_A	76	Probable surface protein; SH3 family, structural g	95.61
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	95.6
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	95.59
2dly_A	121	FYN-related kinase; BRK family kinase, structural	95.56
2krs_A	74	Probable enterotoxin; all beta, SH3, ENTD, CPF_058	95.52
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	95.45
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	95.13
2kq8_A	70	Cell WALL hydrolase; GFT protein structure, NESG,	95.02
1r1p_A	100	GRB2-related adaptor protein 2; SH2, GADS, phospho	94.12
1mil_A	104	SHC adaptor protein; SH2 domain, phosphorylation,	93.64
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	93.61
3maz_A	125	Signal-transducing adaptor protein 1; modular doma	93.05
3tkz_A	109	Tyrosine-protein phosphatase non-receptor type 11;	92.88
2cia_A	102	Cytoplasmic protein NCK2; SH2-domain, SH3 domain,	92.82
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	92.66
2dlz_A	118	Protein VAV-2; RHO family guanine nucleotide excha	92.39
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	92.28
3eaz_A	106	Tyrosine-protein kinase CSK; SH2, disulfide, oxidi	92.27
1rja_A	100	Tyrosine-protein kinase 6; human protein tyrosine	92.26
2el8_A	118	Signal-transducing adaptor protein 2; SH2 domain,	92.12
2kk6_A	116	Proto-oncogene tyrosine-protein kinase FER; method	92.04
1wfw_A	74	Kalirin-9A; SH3 domain, neuron-specific GDP/GTP ex	92.04
3us4_A	98	Megakaryocyte-associated tyrosine-protein kinase;	91.93
1jyr_A	96	Growth factor receptor-bound protein 2; receptor b	91.72
3ov1_A	117	Growth factor receptor-bound protein 2; GRB2 SH2 d	91.61
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	91.41
2lnw_A	122	VAV-2, guanine nucleotide exchange factor VAV2; si	91.26
2eob_A	124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	90.9
1h9o_A	112	Phosphatidylinositol 3-kinase; transferase/recepto	90.81
2hdv_A	111	SH2-B PH domain containing signaling mediator 1 ga	90.74
1ju5_A	109	CRK; CRK, SH2, SH3, adaptor protein, phosphopeptid	90.3
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	90.12
3k2m_A	112	Proto-oncogene tyrosine-protein kinase ABL1; engin	90.0
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	89.68
2iug_A	120	Phosphatidylinositol 3-kinase regulatory alpha sub	89.63
1lkk_A	105	Human P56 tyrosine kinase; complex (tyrosine kinas	89.57
2gsb_A	119	RAS GTPase-activating protein 1; GAP, RAS P21 prot	89.57
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	89.17
3ps5_A	595	Tyrosine-protein phosphatase non-receptor type 6;	88.84
1nrv_A	105	Growth factor receptor-bound protein 10; dimer, si	88.74
1i3z_A	103	EWS/FLI1 activated transcript 2; SH2 domain phosph	88.74
2dx0_A	138	Phospholipase C, gamma 2; phosphoric diester hydro	88.69
1aot_F	106	FYN protein-tyrosine kinase; SH2 domain, signal tr	88.63
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	88.56
3s9k_A	118	Tyrosine-protein kinase ITK/TSK; proline isomeriza	88.31
1blj_A	114	P55 BLK protein tyrosine kinase; signal transducti	88.19
1d4t_A	104	T cell signal transduction molecule SAP; SH2 domai	87.92
2vif_A	141	Suppressor of cytokine signalling 6; growth regula	87.03
2ysx_A	119	Signaling inositol polyphosphate phosphatase SHIP	86.81
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	86.75
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	86.58
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	86.57
1ka6_A	128	SH2 domain protein 1A; SH2 domain, protein-peptide	86.48
3pqz_A	117	Growth factor receptor-bound protein 7; SH2, binds	85.92
2ekx_A	110	Cytoplasmic tyrosine-protein kinase BMX; SH2 domai	85.48
4fbn_A	246	1-phosphatidylinositol 4,5-bisphosphate phosphodi	85.3
2aug_A	126	Growth factor receptor-bound protein 14; phosphory	84.99
2izv_A	187	Suppressor of cytokine signaling 4; signal transdu	84.81
2cs0_A	119	Hematopoietic SH2 domain containing; ALX, FLJ14886	84.75
2oq1_A	254	Tyrosine-protein kinase ZAP-70; tandem SH2 domains	84.09
3h8z_A	128	FragIle X mental retardation syndrome-related Pro;	84.09
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	84.06
3npf_A	306	Putative dipeptidyl-peptidase VI; structural genom	83.88
2b3o_A	532	Tyrosine-protein phosphatase, non-receptor type 6;	83.25
2hmh_A	152	Suppressor of cytokine signaling 3; SOCS3, GP130,	83.09
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	82.91
2ge9_A	125	Tyrosine-protein kinase BTK; SH2 domain, structure	82.34
1a81_A	254	SYK kinase; complex (transferase-peptide), SYK, ki	80.75
2c9w_A	169	Suppressor of cytokine signaling 2; growth regulat	80.38

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.84  E-value=2.2e-21  Score=156.40  Aligned_cols=120  Identities=13%  Similarity=0.220  Sum_probs=98.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCCCCCCcCC-CCcCcEEE
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKK-LSEGQARA  137 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~~~~~~~-~~~~~~~a  137 (225)
                      ...++|+|||.+.    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||++||+.+........+.. .....++|
T Consensus        11 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~~~~~~~p~~~~~~~~a   86 (193)
T 1ng2_A           11 LQTYRAIADYEKT----SGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLDSPDETEDPEPNYAGEPYVA   86 (193)
T ss_dssp             CEEEECSSCBCCS----STTCCCBCTTCEEEEEECCTTSCCEEEECCCCCCCCGGGCCCSSCSSCSCCCCCCTTCEEEEE
T ss_pred             CcEEEEcCCcCCC----CCCcCCCCCCCEEEEEEecCCCeEEEEECCeeeEechheEEeeccccccchhhccccceeeee
Confidence            4568999999999    788999999999999999899999999999999999999998765432211111 13346899


Q ss_pred             cccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        138 KFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       138 ~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      +|+|.+..+++|+|.+||+|.++.. ..++||.+..+.-..|++.+
T Consensus        87 l~dy~a~~~~eLs~~~Gd~i~vl~~-~~~gWw~g~~~g~~G~~P~~  131 (193)
T 1ng2_A           87 IKAYTAVEGDEVSLLEGEAVEVIHK-LLDGWWVIRKDDVTGYFPSM  131 (193)
T ss_dssp             SSCBCCCSTTBCCBCTTCEEEEEEC-CTTSEEEEEETTEEEEEEGG
T ss_pred             ccccCCCCCCcccccCCCEEEEEEe-cCCCeEEEEECCCEEEEehH
Confidence            9999999999999999999999987 47788866666666666554

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.78  E-value=3.7e-19  Score=152.80  Aligned_cols=121  Identities=22%  Similarity=0.278  Sum_probs=96.4

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecCCCCCC-----------
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPYDKIRT-----------  125 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~~~~~~-----------  125 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+ .+|+.||||+|||+.+.......           
T Consensus       133 ~~~~~~alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~g~~~~~  208 (304)
T 2eyz_A          133 EAEYVRALFDFNGN----DEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSALIGGNQEGS  208 (304)
T ss_dssp             CCCEEEECSCCCCS----CSSSCCCCTTCEEEEEECCSSSEEEEECTTSCEEEEESTTEEECCCSTTSCCCCCCCSSCCS
T ss_pred             cceeEEEEeeecCC----CCCcCcccCCCEEEEEEecCCCcEEEEeCCCceeccchhccccccCCCcccccccCCCcCCC
Confidence            34579999999999    788999999999999999999999999 78999999999999875432110           


Q ss_pred             --------Cc--------------CCCCcCcEEEccccc--CCCccccccccccceEEecccccccccccchhhhhhccc
Q psy15850        126 --------AP--------------KKLSEGQARAKFNFV--AQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELIS  181 (225)
Q Consensus       126 --------~~--------------~~~~~~~~~a~~~~~--~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~  181 (225)
                              .+              .......++|+|+|.  +..++||+|++||+|.++.. ..+|||.+.++.-..+++
T Consensus       209 ~~~~~~~~~p~~~~~p~~~~~~p~~~~~~~~~~al~d~~~~a~~~~eL~~~~Gd~i~v~~~-~~~gWw~g~~~g~~G~fP  287 (304)
T 2eyz_A          209 HPQPLGGPEPGPYAQPSVNTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKI-NVSGQWEGECNGKRGHFP  287 (304)
T ss_dssp             CCCSCSCCCSBTTBCSSSSCSSSCCSSCCCCSCCSSCBCCCTTCSSCCCBCTTSCCEEEEE-CTTSCEEEEETTEEEECC
T ss_pred             CCCCCCCCCcccccccccccccCCCCCCCEEEEEeeeecCCCCCCCeecccCCCEEEEEEe-cCCCeEEEEECCceEEec
Confidence                    00              001122578999999  77999999999999999986 567888777777666666


Q ss_pred             hh
Q psy15850        182 EE  183 (225)
Q Consensus       182 ~~  183 (225)
                      .+
T Consensus       288 ~~  289 (304)
T 2eyz_A          288 FT  289 (304)
T ss_dssp             CT
T ss_pred             hH
Confidence            53

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.75  E-value=2.6e-18  Score=140.31  Aligned_cols=118  Identities=26%  Similarity=0.365  Sum_probs=90.3

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEEECCeEEEeeCCcEEeecCCCCC---------------
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGEHNAMIGLFPFNYVEIIPYDKIR---------------  124 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~~---------------  124 (225)
                      .++|+|||.++    ..+||+|++||+|.|+.+. +.+||.|+.+|+.||||+|||+....+|.-               
T Consensus         2 ~~~al~~~~~~----~~~eLs~~~Gd~i~v~~~~~~~~W~~~~~~g~~G~~P~~yv~~~~~~w~~g~isr~~ae~lL~~~   77 (217)
T 1gri_A            2 EAIAKYDFKAT----ADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQ   77 (217)
T ss_dssp             EEEECSCBCCC----SSSCCCBCTTCEEEC------CCEEEEESSSCEEEEEGGGEECCCCSSBCTTCCHHHHHHHHHTC
T ss_pred             EEEEeeccCCc----CCCcCCCCCCCEEEEEeccCCCCeEeeccCCccceECCcccccccchhhcccCCHHHHHHHHhcc
Confidence            37899999999    7899999999999998876 678999999999999999999876544320               


Q ss_pred             ------------CCc-------------------------------------------------------------CCCC
Q psy15850        125 ------------TAP-------------------------------------------------------------KKLS  131 (225)
Q Consensus       125 ------------~~~-------------------------------------------------------------~~~~  131 (225)
                                  ..+                                                             ....
T Consensus        78 ~~~G~fLvR~S~~~~g~~~LSv~~~~~v~h~~I~~~~~g~~~~~~~~f~sl~eLv~~~~~~~~~~~~~~~l~~~~~~~~~  157 (217)
T 1gri_A           78 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQ  157 (217)
T ss_dssp             SSTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSSCEESSSCEESSHHHHHHHHHHSCSSSSTTCCCCBCCCCCCC
T ss_pred             CCCceEEEEccCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeeeEcCCHHHHHHhhhccccccccceeecccccCCCC
Confidence                        000                                                             0012


Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||.+.++.-..+++.+
T Consensus       158 ~~~~~al~~y~~~~~~eL~~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~~  208 (217)
T 1gri_A          158 PTYVQALFDFDPQEDGELGFRRGDFIHVMDN-SDPNWWKGACHGQTGMFPRN  208 (217)
T ss_dssp             CCEEEESSCCCCSSTTBCCCCTTCEEEEEEC-CSSSEEEEECSSCEEEEEGG
T ss_pred             ceEEEecCCccCCCCCcCCCCCCCEEEEEEe-CCCCeEEEEECCeEEEEeHH
Confidence            3468999999999999999999999999987 56788876666666666553

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.73  E-value=3.8e-18  Score=146.71  Aligned_cols=121  Identities=17%  Similarity=0.261  Sum_probs=51.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE-CCeEEEeeCCcEEee---cCCCCC--C-------
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEII---PYDKIR--T-------  125 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~-~g~~G~~P~nyv~~~---~~~~~~--~-------  125 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+. +|+.||||+|||+.+   ......  +       
T Consensus       147 ~~~~~al~dy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~~ss~~s  222 (308)
T 3qwy_A          147 IEVVVGTFKFTGE----RETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQMEFHNDRTSKGASQSSIGS  222 (308)
T ss_dssp             CEEEEESSCBCCS----STTBCCBCTTCEEEEEECCSSSEEEEECTTSCEEEEEGGGEEEC-------------------
T ss_pred             ceeEEEeceEcCC----CCCcCcCCCCCEEEEEEcCCCCeEEEEeCCCCeeEecccccccccccccCccccccccCCCCC
Confidence            4579999999999    7889999999999999999999999995 999999999999933   211000  0       


Q ss_pred             ----------------CcCCCC--cCcEEEccccc--CCCccccccccccceEEecccccccccccchhhhhhccchhH
Q psy15850        126 ----------------APKKLS--EGQARAKFNFV--AQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEE  184 (225)
Q Consensus       126 ----------------~~~~~~--~~~~~a~~~~~--~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~e  184 (225)
                                      .+....  ...+.|+|+|.  +.+++||+|++||+|+++.. ..++||.+.++.-..+++.+-
T Consensus       223 s~s~p~p~s~ps~~sp~p~~~~~~~~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~-~~~~ww~g~~~g~~G~fP~~y  300 (308)
T 3qwy_A          223 SGGGAERFSSASTSSDNIELQPRLPAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQK-MSNGMYKAELDGQIGSVPHTY  300 (308)
T ss_dssp             -------------------------------------------------------------------------------
T ss_pred             ccccccccccccccCcccccccccccccccccccccccCCcccceeCCCCEEEEEEE-cCCCcEEEEECCeeEEechHH
Confidence                            000001  24578999994  45569999999999999987 446777877787777776643

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=99.72  E-value=4e-18  Score=111.59  Aligned_cols=54  Identities=30%  Similarity=0.637  Sum_probs=49.3

Q ss_pred             EEEEeecccCCCCCCCCcc-ccccCCCeEEEEEecCCCeEEEEE-CCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTE-LSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~e-Ls~~~Gdii~v~~~~~~~Ww~g~~-~g~~G~~P~nyv~~~  118 (225)
                      .|+|+|||.++    ..+| |+|++||+|.|+++.+++||.|+. +|+.||||+|||+.+
T Consensus         5 ~~rAlydy~~~----~~~e~Ls~~~Gd~i~v~~~~~~~Ww~g~~~~G~~G~fP~nyVe~i   60 (60)
T 2lx7_A            5 RCRTLYPFSGE----RHGQGLRFAAGELITLLQVPDGGWWEGEKEDGLRGWFPASYVQLL   60 (60)
T ss_dssp             EEEESCCCCSC----CCSSCCCCCTTCEEEBSCCCTTSCEEEECTTSCEEEECGGGEEEC
T ss_pred             EEEECcccCCC----CCCCCccCCCCCEEEEeEecCCCeEEEEeCCCCEEEEcHHHEEEC
Confidence            58999999998    6666 999999999999999999999996 689999999999875

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.56  E-value=3.8e-19  Score=152.63  Aligned_cols=122  Identities=20%  Similarity=0.281  Sum_probs=96.7

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecCCCCCC-----------
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPYDKIRT-----------  125 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~~~~~~-----------  125 (225)
                      ....++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+ .+|+.||||+|||+.+.......           
T Consensus       124 ~~~~~~alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~~~~~~~~~~s~~~~~~~  199 (303)
T 2lqn_A          124 NLEYVRTLYDFPGN----DAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSSPHGKHGNRNSNSYG  199 (303)
Confidence            34568999999999    788999999999999999899999999 68999999999999875432100           


Q ss_pred             ----------------CcC---------------CCCcCcEEEcccccCCC--ccccccccccceEEecccccccccccc
Q psy15850        126 ----------------APK---------------KLSEGQARAKFNFVAQT--HLELSLVKESPHKYVDSEVTLQYRRPV  172 (225)
Q Consensus       126 ----------------~~~---------------~~~~~~~~a~~~~~~~~--~~els~~~g~~v~~~~~~~~~~~~f~~  172 (225)
                                      .+.               ......++|+|+|.++.  +.||+|++||+|.|+.. ..+|||.+.
T Consensus       200 ~p~~s~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~-~~~gWw~g~  278 (303)
T 2lqn_A          200 IPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRM-NINGQWEGE  278 (303)
Confidence                            000               00123589999997554  77999999999999987 677899887


Q ss_pred             hhhhhhccchhH
Q psy15850        173 RNEIKELISEEE  184 (225)
Q Consensus       173 ~~~l~e~~~~~e  184 (225)
                      ++.-..+++.+-
T Consensus       279 ~~g~~G~fP~~y  290 (303)
T 2lqn_A          279 VNGRKGLFPFTH  290 (303)
Confidence            887777777643

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=99.71  E-value=3.5e-17  Score=108.89  Aligned_cols=56  Identities=32%  Similarity=0.520  Sum_probs=51.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~  118 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+++.+++||.|+.  +|+.||||+|||+++
T Consensus         6 ~~~~~Alydy~a~----~~~ELs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~nyVe~l   63 (65)
T 2lj0_A            6 LFSYQALYSYIPQ----NDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKPL   63 (65)
T ss_dssp             SCEEEESSCBCCS----STTBCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEETTSEEEC
T ss_pred             CEEEEEceeECCC----CcCCcCCCCCCEEEEeEeCCCCEEEEEECCCCCEEEEehhHeEEE
Confidence            3457899999999    7889999999999999999999999996  689999999999986

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=99.69  E-value=1.3e-17  Score=145.39  Aligned_cols=111  Identities=20%  Similarity=0.378  Sum_probs=85.7

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCCCCCCcC-----------
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPK-----------  128 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~~~~~~-----------  128 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.+..........           
T Consensus       175 ~~~~alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~~~~~~~~~  250 (341)
T 2dyb_A          175 PRAEALFDFTGN----SKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDT  250 (341)
T ss_dssp             CEEEESSCBCCS----SSSBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEEECCCCTTCCCEEEEEEEECSS
T ss_pred             cEEEEEEeeCCC----CCCcCCccCCCEEEEEEecCCCEEEEEECCcEEEechHHeEEcCCCCccccccccccccccCCC
Confidence            468999999999    78899999999999999999999999999999999999999985432211100           


Q ss_pred             ------------CCCcCcEEEcccccC----CCcccccc--ccccceEEecccccccccccchhh
Q psy15850        129 ------------KLSEGQARAKFNFVA----QTHLELSL--VKESPHKYVDSEVTLQYRRPVRNE  175 (225)
Q Consensus       129 ------------~~~~~~~~a~~~~~~----~~~~els~--~~g~~v~~~~~~~~~~~~f~~~~~  175 (225)
                                  ......+.|+|+|.+    .++.+|+|  .+||+|+++.. ...|||.+.+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~a~yd~~~~~~~~~e~eL~~~~~~GD~I~v~~~-~d~gWw~Ge~~g  314 (341)
T 2dyb_A          251 ISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSD-EDVALMVRQARG  314 (341)
T ss_dssp             CEEEEEEEECSCTTCCCCHHHHHHHHHHHHTCSCEEEEEECSSSCEEECCSH-HHHHHHHHHHTT
T ss_pred             CccccccccccccCCCcchhhhhhhhhhhcCCCcccccCCCCCCCEEEEeee-cCCCEeEEEECC
Confidence                        011223456777776    66777777  79999999988 567888665443

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=99.68  E-value=7.8e-17  Score=109.67  Aligned_cols=71  Identities=24%  Similarity=0.416  Sum_probs=60.9

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCCCCCCcCCCCcCcEEEcccc
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNF  141 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~~~~~~~~~~~~~~a~~~~  141 (225)
                      ++|+|||.+.     .+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+....        ....++|+|+|
T Consensus         3 a~alydy~~~-----~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~--------~~~~~~alydy   69 (73)
T 2kxd_A            3 APPLPPYSAG-----GREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGT--------GKELVLALYDY   69 (73)
T ss_dssp             CCCCCSSCCC-----SCCCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCSSC--------CSCEEEESSCB
T ss_pred             EEEeeeeCCC-----CCEeeEcCCCEEEEEEecCCCEEEEEECCCEEEEehHHeEEcCCCC--------CCceEEEeccc
Confidence            6799999963     6799999999999999989999999999999999999999885421        13578999999


Q ss_pred             cCCC
Q psy15850        142 VAQT  145 (225)
Q Consensus       142 ~~~~  145 (225)
                      .+.+
T Consensus        70 ~a~s   73 (73)
T 2kxd_A           70 QEKS   73 (73)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            8753

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=99.68  E-value=1.1e-16  Score=106.55  Aligned_cols=58  Identities=43%  Similarity=0.906  Sum_probs=53.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+..+
T Consensus         2 ~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~   59 (65)
T 2nwm_A            2 KAARLKFDFQAQ----SPKELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVLPLE   59 (65)
T ss_dssp             CEEEECSCBCCC----STTBCCBCTTCEEEEEECCTTTCEEEEETTEEEEECGGGEEECCCC
T ss_pred             cEEEEeeeECCC----CcCccCCcCCCEEEEEEecCCCEEEEEECCcEEEEehhhEEEcCCC
Confidence            468999999999    7889999999999999998899999999999999999999987643

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=99.67  E-value=1.8e-16  Score=103.78  Aligned_cols=56  Identities=34%  Similarity=0.753  Sum_probs=52.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+.+
T Consensus         4 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~l   59 (60)
T 1w70_A            4 HMRAEALFDFTGN----SKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKIL   59 (60)
T ss_dssp             SCEEEESSCBCCS----STTBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCcC----CCCCccCCCCCEEEEEEeCCCCeEEEEECCCEEEechHHEEEC
Confidence            3468999999999    7889999999999999998999999999999999999999876

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.67  E-value=2.4e-16  Score=124.80  Aligned_cols=119  Identities=16%  Similarity=0.216  Sum_probs=93.8

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeec----CCCCC-CCc-----
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIP----YDKIR-TAP-----  127 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~----~~~~~-~~~-----  127 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+ +.+||.|+.  +|+.|+||+|||+.+.    ..|.- .++     
T Consensus        13 ~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~vP~~yv~~~~~l~~~~w~~g~isr~~ae   87 (175)
T 4d8k_A           13 NLVIALHSYEPS----HDGDLGFEKGEQLRILEQ-SGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAE   87 (175)
T ss_dssp             CEEEESSCBCCC----SSSBCCBCTTCEEEEEEC-CSSEEEEEETTTCCEEEEEGGGEEETTCSTTCTTBCSSCCHHHHH
T ss_pred             cEEEEccCcCCc----CCcccccccCCEEEEEcc-CCCEEEEEECCCCceeeeccccccccccccccceecCcccHHHHH
Confidence            568999999999    788999999999999998 679999997  8999999999999764    22331 111     


Q ss_pred             -----CCCCcCcEEEcccccCCCcccccccc-----ccceEEecccc-ccc-cc------ccchhhhhhccchh
Q psy15850        128 -----KKLSEGQARAKFNFVAQTHLELSLVK-----ESPHKYVDSEV-TLQ-YR------RPVRNEIKELISEE  183 (225)
Q Consensus       128 -----~~~~~~~~~a~~~~~~~~~~els~~~-----g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~~  183 (225)
                           .....|.|++|.+....+.+.||++.     +..|+++.... ..| |.      |.++.+|++||..+
T Consensus        88 ~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~  161 (175)
T 4d8k_A           88 RQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNA  161 (175)
T ss_dssp             HHHHSTTCCTTCEEEEECSSSTTCEEEEEEEECTTSCEEEEEEEEEECSSSCEESSTTSEESSHHHHHHHHHHC
T ss_pred             HHHhcCCCCCCEEEEEECCCCCCeEEEEEEeCcccCCCceEEEEEEECCCCCEEECCCCccCCHHHHHHHHhhC
Confidence                 11357899999998889999999997     77777766532 222 22      78999999998764

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=99.67  E-value=2e-16  Score=102.71  Aligned_cols=56  Identities=29%  Similarity=0.618  Sum_probs=52.1

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+.+.
T Consensus         2 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   57 (58)
T 1uti_A            2 RWARALYDFEAL----EEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPMM   57 (58)
T ss_dssp             CEEEESSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECC
T ss_pred             eEEEECccCCCC----CcCCCCCCCCCEEEEEEECCCCEEEEEECCeEEEeeHHHeEEcc
Confidence            468999999999    78899999999999999988999999999999999999999764

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=99.66  E-value=2.7e-16  Score=102.48  Aligned_cols=55  Identities=42%  Similarity=0.722  Sum_probs=51.4

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+
T Consensus         5 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~l   59 (59)
T 2g6f_X            5 SVVRAKFNFQQT----NEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREI   59 (59)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cEEEECceeCCC----CcCCcCCCCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEEC
Confidence            468999999999    7889999999999999998999999999999999999999864

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=99.66  E-value=3.4e-16  Score=108.40  Aligned_cols=60  Identities=35%  Similarity=0.580  Sum_probs=54.6

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCC-eEEEEECCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~-Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+.+ ||.|+++|+.||||+|||+.+...
T Consensus         9 ~~~~~~alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~   69 (80)
T 2i0n_A            9 FAKYARALKDYNVS----DTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHVEILLSD   69 (80)
T ss_dssp             CCCEEEESSCBCCC----SSSSCCBCSSEEEEEEEESSSSSEEEEEETTEEEEEEGGGEEEESSC
T ss_pred             CCeEEEECCCCCcC----CCCCcCCCCCCEEEEEEecCCCCEEEEEECCcEEEechHHEEECCCC
Confidence            34578999999999    7889999999999999988777 999999999999999999998654

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=99.66  E-value=2.7e-16  Score=102.08  Aligned_cols=55  Identities=42%  Similarity=0.750  Sum_probs=51.7

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .+++|+|||.++    ..++|+|++||+|.|+.+.+++||.|+.+|+.||||++||+.+
T Consensus         3 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~   57 (58)
T 1sem_A            3 KFVQALFDFNPQ----ESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEEEEECSSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEECcCCCCC----CCCCcCCCCCCEEEEEEecCCCEEEEEECCcEEEechHHeEEC
Confidence            468999999999    7889999999999999998899999999999999999999875

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=99.66  E-value=2.3e-16  Score=102.52  Aligned_cols=55  Identities=35%  Similarity=0.501  Sum_probs=51.5

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      .++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+.+.
T Consensus         3 ~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   57 (58)
T 2bz8_A            3 EAIVEFDYQAQ----HDDELTISVGEIITNIRKEDGGWWEGQINGRRGLFPDNFVREIK   57 (58)
T ss_dssp             CEEESSCBCCC----STTBCCBCTTCEEEEEECCTTTEEEEEETTEEEEEEGGGEEECC
T ss_pred             EEEECcccCCC----CcCEeeECCCCEEEEEEeCCCCEEEEEECCeEEEEehHHeEEcC
Confidence            47899999999    78899999999999999989999999999999999999999864

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=3e-16  Score=105.31  Aligned_cols=58  Identities=28%  Similarity=0.427  Sum_probs=53.8

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+.+..
T Consensus         7 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 2dmo_A            7 GEAHRVLFGFVPE----TKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVSG   64 (68)
T ss_dssp             SEEEEECSSCCCC----SSSSCCCCTTCEEEECEECSSSCEEEEETTEEEEECSTTEEECCC
T ss_pred             CCEEEECcCCCcC----CcCCCCCCCCCEEEEEEeCCCCEEEEEeCCCEEEeehHHeEECCC
Confidence            4568999999999    788999999999999999899999999999999999999999854

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=99.66  E-value=3.1e-16  Score=101.89  Aligned_cols=55  Identities=29%  Similarity=0.633  Sum_probs=51.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+.+
T Consensus         3 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~   57 (58)
T 1zx6_A            3 EYVEALYQFDPQ----QDGDLGLKPGDKVQLLEKLSPEWYKGSCNGRTGIFPANYVKPA   57 (58)
T ss_dssp             CEEEECSCBCCC----STTBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEECceECCC----CCCCccCCCCCEEEEEEecCCCEEEEEECCcEEEeeHHHEEEc
Confidence            468999999999    7889999999999999998999999999999999999999864

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=99.66  E-value=3.2e-16  Score=103.82  Aligned_cols=57  Identities=32%  Similarity=0.641  Sum_probs=51.9

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEec--CCCeEEEEECCeEEEeeCCcEEee
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~--~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.  +++||.|+.+|+.|+||+|||+.+
T Consensus         5 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~l   63 (64)
T 2jte_A            5 AKEYCRTLFPYTGT----NEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQI   63 (64)
T ss_dssp             SSEEEEESSCBCCS----SSSBCCBCTTCEEEEEESCSSSTTEEEEEETTEEEEEEGGGEEEC
T ss_pred             CCEEEEECccCCcc----CCCccCCCCCCEEEEEECCCCCCCEEEEEECCeEEEEeHHHEEEC
Confidence            34568999999999    7889999999999999875  679999999999999999999876

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=99.65  E-value=3.4e-16  Score=105.10  Aligned_cols=56  Identities=46%  Similarity=0.801  Sum_probs=52.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+.
T Consensus         4 ~~~~Alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   59 (68)
T 2ew3_A            4 PCCRGLYDFEPE----NQGELGFKEGDIITLTNQIDENWYEGMIHGESGFFPINYVEVIV   59 (68)
T ss_dssp             CEEEESSCBCCC----STTBCCBCTTCEEEEEEESSSSEEEEEETTEEEEEEGGGEEESC
T ss_pred             CEEEEeeeECCC----CCCccCCCCCCEEEEEEecCCCEEEEEECCcEEEeeHHHEEEcC
Confidence            468999999999    78899999999999999999999999999999999999999874

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=99.65  E-value=4.2e-16  Score=104.98  Aligned_cols=57  Identities=35%  Similarity=0.671  Sum_probs=52.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEec--CCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~--~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.  +++||.|+.+|+.||||+|||+.+..
T Consensus         3 ~~~~Alydy~a~----~~~eLs~~~Gd~i~vl~~~~~~~gWw~g~~~g~~G~~P~~yV~~~~~   61 (69)
T 2ydl_A            3 DYCKVIFPYEAQ----NDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPP   61 (69)
T ss_dssp             EEEEESSCBCCC----STTBCCBCTTCEEEEEESCCSSTTEEEEEETTEEEEEEGGGEEECCS
T ss_pred             cEEEEcccCCCC----CCCccccCCCCEEEEEEcCCCCCCEEEEEECCcEEEecHHHEEECCC
Confidence            468999999999    7889999999999999985  78999999999999999999998753

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=99.65  E-value=3.2e-16  Score=103.23  Aligned_cols=56  Identities=30%  Similarity=0.447  Sum_probs=51.5

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEe-cCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ-VDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      .++|+|||.++    ..++|+|++||+|.|+.+ .+++||.|+.+|+.||||+|||+.+..
T Consensus         3 ~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   59 (62)
T 2j6f_A            3 DYIVEYDYDAV----HDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIKR   59 (62)
T ss_dssp             CEEECSCBCCS----STTBCCBCTTCEEEEEEECSSTTEEEEEETTEEEEEEGGGEEECC-
T ss_pred             EEEECccCCcC----CcCCcCCcCCCEEEEEEecCCCCEEEEEECCcEEEechHHEEECCC
Confidence            47899999999    788999999999999998 788999999999999999999998753

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=99.65  E-value=4.3e-16  Score=101.10  Aligned_cols=55  Identities=38%  Similarity=0.777  Sum_probs=51.6

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||++||+.+
T Consensus         3 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~   57 (58)
T 2vwf_A            3 TYVQALFDFDPQ----EDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTAV   57 (58)
T ss_dssp             CEEEESSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEECceECCC----CcCCcCCCCCCEEEEEEcCCCCEEEEEECCcEEEEchHHeEEC
Confidence            468999999999    7889999999999999998899999999999999999999875

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=99.65  E-value=5e-16  Score=101.55  Aligned_cols=55  Identities=33%  Similarity=0.541  Sum_probs=51.4

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+.+
T Consensus         6 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~l   60 (60)
T 2xmf_A            6 PQCKALYAYDAQ----DTDELSFNANDIIDIIKEDPSGWWTGRLRGKQGLFPNNYVTKI   60 (60)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cEEEECccCCcC----CcCCcCCCCCCEEEEEEecCCCEEEEEECCEEEEEcHHHEEEC
Confidence            468999999999    7889999999999999998999999999999999999999864

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=99.64  E-value=5.2e-16  Score=102.79  Aligned_cols=58  Identities=40%  Similarity=0.659  Sum_probs=53.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+..
T Consensus         6 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   63 (64)
T 2ak5_A            6 QLVVRAKFNFQQT----NEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKP   63 (64)
T ss_dssp             CCEEEESSCBCCC----STTBCCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEECCC
T ss_pred             CEEEEEccccCCc----CcCcccCCCCCEEEEeEecCCCEEEEEECCCEEEEehHHeEEcCC
Confidence            4568999999999    788999999999999999899999999999999999999998753

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.64  E-value=5.7e-16  Score=103.89  Aligned_cols=59  Identities=24%  Similarity=0.511  Sum_probs=54.0

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+..+
T Consensus         7 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (68)
T 2dl4_A            7 GNTYVALYKFVPQ----ENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLSGP   65 (68)
T ss_dssp             CCEEEESSCCCCS----STTBCCCCTTCEEEEEECCCSSEEEEECSSCEEEEETTTEEECCCC
T ss_pred             CCEEEEeeeECCC----CcCCcCCCCCCEEEEEEeCCCCEEEEEECCcEEEEehHHeEECCCC
Confidence            3568999999999    7889999999999999998999999999999999999999998643

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=99.64  E-value=4.6e-16  Score=104.36  Aligned_cols=57  Identities=26%  Similarity=0.412  Sum_probs=51.7

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECC-----eEEEeeCCcEEee
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNA-----MIGLFPFNYVEII  118 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g-----~~G~~P~nyv~~~  118 (225)
                      ....++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+..+     +.|+||+|||+.+
T Consensus         6 ~~~~~~Alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv~~~   67 (68)
T 1tg0_A            6 VPFKVVAQFPYKSD----YEDDLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVAVQ   67 (68)
T ss_dssp             SSEEEEESSCBCCS----CTTBCCBCTTCEEEEEEECSSSEEEEEEECTTSCEEEEEEEGGGEEEC
T ss_pred             CCEEEEECeeECcC----CcCCCCCCCCCEEEEEEecCCCeEEEEECCCCCCCEEEEEchHHEEEC
Confidence            34578999999999    788999999999999999999999999766     9999999999875

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=99.64  E-value=6e-16  Score=103.74  Aligned_cols=59  Identities=41%  Similarity=0.753  Sum_probs=54.0

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+..
T Consensus         6 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 2djq_A            6 SGPRAKALCNYRGK----NPGDLKFNKGDVILLRRQLDENWYQGEINGVSGIFPASSVEVISG   64 (68)
T ss_dssp             SCCEEEECSCCCSC----CTTCCCCCTTCEEEEEECCCSSEEEEEETTEEEEEESSSEETTCS
T ss_pred             CceEEEECCCCCCC----CcCCccCCCCCEEEEEEecCCCEEEEEECCcEEEeehHHEEEcCC
Confidence            34578999999999    788999999999999999899999999999999999999998754

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=99.64  E-value=3.7e-16  Score=103.60  Aligned_cols=58  Identities=33%  Similarity=0.651  Sum_probs=52.6

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      ...+++|+|||.++    ..++|+|++||+|.|+.+.+.+||.|+.+|+.|+||+|||+.++
T Consensus         6 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~   63 (65)
T 3u23_A            6 KKRQCKVLFEYIPQ----NEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELE   63 (65)
T ss_dssp             --CEEEECSCBCCS----STTBCCBCTTCEEEEEEEEETTEEEEEETTEEEEEEGGGEEECC
T ss_pred             CCeEEEEeeeeCCC----CcCCcCCCCCCEEEEEEecCCCEEEEEECCCEEEeehHHEEECc
Confidence            34579999999999    78899999999999999988999999999999999999999874

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=99.64  E-value=5.2e-16  Score=101.99  Aligned_cols=57  Identities=28%  Similarity=0.519  Sum_probs=52.4

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ....++|+|||.++    ..++|+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+
T Consensus         5 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~g~~G~~P~~yv~~~   61 (62)
T 3ngp_A            5 GKELVLVLYDYQEK----SPRELTVKKGDILTLLNSTNKDWWKIEVNGRQGFVPAAYLKKL   61 (62)
T ss_dssp             -CCEEEECSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CCEEEEECcCCCCC----CCCCccCCCCCEEEEeEecCCCeEEEEECCEEEEEEHHHEEEC
Confidence            34568999999999    7889999999999999998899999999999999999999876

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=8.6e-16  Score=108.28  Aligned_cols=60  Identities=30%  Similarity=0.436  Sum_probs=53.7

Q ss_pred             cceEEEEeeccc--CCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDIS--SRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~--~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...+++|+|||.  ++    ..+||+|++||+|.|+.+.+.+||.|+++|+.||||+|||+.+...
T Consensus        15 ~~~~~~alydy~~~a~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~   76 (88)
T 2dbk_A           15 GPVFAKAIQKRVPCAY----DKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDPQ   76 (88)
T ss_dssp             CCEEEEECSCBCCCTT----CSSBCCBCTTCEEEEEEECTTSCEEEECSSCEEEECTTTEEECCSS
T ss_pred             CCEEEEEcccccCCCC----CCCcccCCCCCEEEEEEecCCCEEEEEeCCCEEEEehHHeEECCCC
Confidence            345789999999  55    5789999999999999999999999999999999999999998644

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=99.64  E-value=3.8e-16  Score=101.44  Aligned_cols=54  Identities=33%  Similarity=0.525  Sum_probs=50.3

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC--CeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~--g~~G~~P~nyv~~~  118 (225)
                      .++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+..  |+.|+||+|||+.+
T Consensus         2 ~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~   57 (58)
T 1jo8_A            2 WATAEYDYDAA----EDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEECceECCC----CCCCcccCCCCEEEEEEecCCCcEEEEECCCCCEEEechHHeEEC
Confidence            37899999999    78899999999999999989999999987  99999999999875

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.64  E-value=1.9e-16  Score=104.25  Aligned_cols=57  Identities=32%  Similarity=0.624  Sum_probs=52.6

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.++
T Consensus         5 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   61 (62)
T 1k4u_S            5 GSQVEALFSYEAT----QPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CEEEECCSCBCCC----SSSBCCBCSSCEEEEEEESSSSCEEEECSSCEEEECGGGCCCSC
T ss_pred             CeEEEECCCCCcC----CCCCccCCCCCEEEEEEeCCCCEEEEEECCcEEEEeHHHEEECC
Confidence            3468999999999    78899999999999999988999999999999999999998764

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=99.64  E-value=6e-16  Score=105.31  Aligned_cols=59  Identities=25%  Similarity=0.355  Sum_probs=52.8

Q ss_pred             ceEEEEeecccCC-CCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSR-RHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~-~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.+. .   +.+||+|++||+|.|+.+.+.+||.|+++|+.||||+|||+.+..
T Consensus         9 ~~~~~alydy~~~~~---~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~   68 (73)
T 2ebp_A            9 CGRARVHTDFTPSPY---DTDSLKLKKGDIIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLSS   68 (73)
T ss_dssp             SEEEEECSCBCCCTT---CCSBCCBCSSCEEEEEECCSSSCEEEECSSCEEEECSTTEEECCC
T ss_pred             ceEEEEeeccCCCCC---CCCccCCCCCCEEEEEEeCCCCeEEEEECCCEEEEeHHHEEECCC
Confidence            4568999999964 1   578999999999999999999999999999999999999999854

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=99.64  E-value=7.4e-16  Score=104.74  Aligned_cols=61  Identities=34%  Similarity=0.648  Sum_probs=55.0

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEec--CCCeEEEEECCeEEEeeCCcEEeecCCC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEIIPYDK  122 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~--~~~Ww~g~~~g~~G~~P~nyv~~~~~~~  122 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.  +.+||.|+.+|+.||||+|||+.++..+
T Consensus         8 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~~~   70 (73)
T 2k9g_A            8 SKDYCKVIFPYEAQ----NDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLPPDF   70 (73)
T ss_dssp             SCEEEEECSCBCCS----STTBCCBCTTCEEEEEECCSSSTTEEEEEETTEEEEEEGGGEEECCSSC
T ss_pred             CccEEEECccCCCC----CCCeeeECCCCEEEEEECCCCCCCEEEEEECCeEEEEchHHEEECCccc
Confidence            35678999999999    7889999999999999985  7899999999999999999999986543

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=99.64  E-value=1.1e-16  Score=106.48  Aligned_cols=57  Identities=33%  Similarity=0.631  Sum_probs=52.6

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+.+..
T Consensus         2 ~~~~Alydy~~~----~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~   58 (65)
T 2fei_A            2 RQCKVLFEYIPQ----NEDELELKVGDIIDINEEVEEGWWSGTLNNKLGLFPSNFVKELEL   58 (65)
T ss_dssp             CEEECSSCCCCC----STTBCCCCTTCEEECCCCSSSSEEEEESSSCEEEEETTTSCBCCC
T ss_pred             eEEEECccCCcC----CcCccCCCCCCEEEEEEecCCCEEEEEECCcEEEecHHHEEEcCC
Confidence            368999999999    788999999999999999899999999999999999999988753

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=99.64  E-value=6.4e-16  Score=100.36  Aligned_cols=55  Identities=36%  Similarity=0.671  Sum_probs=51.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~  117 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.
T Consensus         3 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~   57 (58)
T 1zlm_A            3 VKVFRALYTFEPR----TPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAE   57 (58)
T ss_dssp             CEEEEESSCBCCS----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEE
T ss_pred             cEEEEECccCCCC----CCCCccCCCCCEEEEEEeCCCCEEEEEECCCEEEEehHHEEe
Confidence            3568999999999    788999999999999999889999999999999999999975

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.64  E-value=7e-16  Score=103.44  Aligned_cols=59  Identities=34%  Similarity=0.599  Sum_probs=54.2

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+..
T Consensus         6 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 1x2k_A            6 SGKVFRALYTFEPR----TPDELYFEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQSG   64 (68)
T ss_dssp             CSEEEEESSCCCCC----STTBCCCCSSCEEEEEECSCSSEEEEESSSCEEEEETTTEEECCC
T ss_pred             CcEEEEECceECCC----CCCcccCCCCCEEEEEEcCCCCEEEEEECCcEEEEehHHeEEcCC
Confidence            45678999999999    788999999999999999889999999999999999999998754

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=8.1e-16  Score=104.58  Aligned_cols=60  Identities=33%  Similarity=0.511  Sum_probs=54.0

Q ss_pred             ccceEEEEeecccCCCCCCCCccccccCCCeEEEEEe---cCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         57 RRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ---VDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        57 ~~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~---~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      +...+++|+|||.++    ..+||+|++||+|.|+.+   .+.+||.|+.+|+.||||+|||+.+..
T Consensus         6 ~~~~~~~alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   68 (73)
T 2dl7_A            6 SGVCFVKALYDYEGQ----TDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEELSS   68 (73)
T ss_dssp             CCCEEEEESSCBCCS----STTBCCBCTTCEEEEEECCCSSSSSCEEEEETTEEEEECSSSEEECCS
T ss_pred             CCCEEEEECccCCcC----CCCcCCCCCCCEEEEEECCCCCCCCcEEEEECCCEEEEChHHEEECCC
Confidence            345679999999999    788999999999999998   478999999999999999999998754

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=99.64  E-value=4.7e-16  Score=101.71  Aligned_cols=54  Identities=33%  Similarity=0.685  Sum_probs=50.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEE
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE  116 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~  116 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+
T Consensus         6 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~   59 (60)
T 2gnc_A            6 PEFAIAKFDYVGR----SARELSFKKGASLLLYHRASEDWWEGRHNGIDGLVPHQYIV   59 (60)
T ss_dssp             CEEEEESSCBCCS----STTBCCBCTTCEEEEEEEEETTEEEEEETTEEEEEEGGGEE
T ss_pred             CEEEEECCCCCcC----CcCCcCCCCCCEEEEEEecCCCEEEEEECCeEEEEeHhhEE
Confidence            4568999999999    78899999999999999988899999999999999999997

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.64  E-value=8.7e-16  Score=104.17  Aligned_cols=59  Identities=31%  Similarity=0.563  Sum_probs=54.1

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+..
T Consensus         8 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   66 (72)
T 2dl8_A            8 EPIEAIAKFDYVGR----TARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDT   66 (72)
T ss_dssp             SCEEEEESSCBCCS----SSSBCCBCTTCEEEEEEEEETTEEEEEETTEEEEECSSSEEECCS
T ss_pred             CCEEEEECccCCcC----CCCEeccCCCCEEEEEeecCCCEEEEEECCEEEEEchHHeEEcCC
Confidence            34578999999999    788999999999999998888999999999999999999998754

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=99.63  E-value=7.7e-16  Score=102.96  Aligned_cols=59  Identities=31%  Similarity=0.427  Sum_probs=51.9

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++..  ..++|+|++||+|.|+.+.+.+||.|+++|+.|+||+|||+.+..
T Consensus         2 ~~~~al~dy~~~~~--~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~   60 (67)
T 2bzy_A            2 VFAKAIQKRVPCAY--DKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDP   60 (67)
T ss_dssp             EEEEECSCBCSEEE--CTTBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEECCS
T ss_pred             cEEEEeeeECCCCC--CCCccccCCCCEEEEEEecCCCeEEEEeCCcEEEEehHHeEECCC
Confidence            46899999988610  256999999999999999999999999999999999999999864

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=6e-16  Score=105.86  Aligned_cols=62  Identities=21%  Similarity=0.341  Sum_probs=52.5

Q ss_pred             cceEEEEeecccCCCCCC---CCccccccCCCeEEEEE-ecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         58 RRKYLQELHDISSRRHTD---NFTELSFKKGDIIFVRR-QVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~---~~~eLs~~~Gdii~v~~-~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      ...+++|+|||.++..+.   ..+||+|++||+|.|+. ..+.+||.|+++|+.||||+|||+.++
T Consensus         6 ~~~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~fP~~yv~~~~   71 (75)
T 2ege_A            6 SGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMS   71 (75)
T ss_dssp             CSEEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESCCCTTCEEEEESSSCEEEEETTTEEECC
T ss_pred             CCcEEEECCCCCCCccccCCCCCCcceECCCCEEEEeEccCCCCEEEEEECCcEEEEChHHeEEcc
Confidence            345789999999993100   07899999999999997 578899999999999999999999875

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=99.63  E-value=7.9e-16  Score=99.85  Aligned_cols=55  Identities=38%  Similarity=0.620  Sum_probs=51.2

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+
T Consensus         4 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~l   58 (58)
T 2drm_A            4 IQVKALYDYDAQ----TGDELTFKEGDTIIVHQKDPAGWWEGELNGKRGWVPANYVQDI   58 (58)
T ss_dssp             EEEEESSCBCCC----STTBCCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cEEEECccCCCC----CcCCcCCCCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEEC
Confidence            358999999999    7889999999999999998899999999999999999999864

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=99.63  E-value=6.9e-16  Score=103.75  Aligned_cols=56  Identities=30%  Similarity=0.408  Sum_probs=52.1

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEec---CCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV---DKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~---~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.   +.+||.|+.+|+.||||+|||+.+.
T Consensus         4 ~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   62 (69)
T 1wyx_A            4 VLAKALYDNVAE----SPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIVPGNRLKILV   62 (69)
T ss_dssp             EEEEESSCBCCS----STTBCCBCTTCEEEEEETTGGGCTTEEEEEETTEEEEEEGGGEEEEE
T ss_pred             EEEEECccCCcC----CCCccCCcCCCEEEEeECCCCCCCCcEEEEECCcEEEechhhEEECC
Confidence            458999999999    7889999999999999987   7899999999999999999999875

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=99.63  E-value=5.4e-16  Score=103.19  Aligned_cols=57  Identities=32%  Similarity=0.676  Sum_probs=52.1

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+ .+|+.||||+|||+....
T Consensus         4 ~~~~Alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   61 (65)
T 1b07_A            4 EYVRALFDFNGN----DEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYHH   61 (65)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEECC-
T ss_pred             eEEEECCcCCCC----CCCccCCcCCCEEEEEEecCCCeEEEEECCCCEEEEChHHEeecCC
Confidence            468999999999    788999999999999999889999999 789999999999998653

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=99.63  E-value=5.1e-16  Score=103.86  Aligned_cols=60  Identities=23%  Similarity=0.376  Sum_probs=52.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      +.+++|+|||.++..  +.+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.+..
T Consensus         6 ~~~~~alydy~~~~~--~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~   65 (67)
T 2eyx_A            6 PIYARVIQKRVPNAY--DKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLDQ   65 (67)
T ss_dssp             SCBEEECCCBCCCTT--CSSBCCBCSSEEEEEEEECTTSEEEEEETTEEEEEEGGGBCCBCS
T ss_pred             CEEEEEeEEECCCCC--CCCccccCCCCEEEEEEecCCCEEEEEECCCEEEEehHhEEEcCC
Confidence            456899999998721  356999999999999999999999999999999999999998753

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=99.63  E-value=8.9e-16  Score=100.31  Aligned_cols=55  Identities=31%  Similarity=0.669  Sum_probs=50.4

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEec--CCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~--~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.  +++||.|+.+|+.||||+|||+.+
T Consensus         4 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~l   60 (60)
T 1oot_A            4 PKAVALYSFAGE----ESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV   60 (60)
T ss_dssp             CEEEESSCBCCC----STTBCCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             cEEEECccCCcC----CcCEeeEcCCCEEEEEEeCCCCCCeEEEEECCEEEEEeHHHEEEC
Confidence            358899999999    7889999999999999986  689999999999999999999864

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.63  E-value=1.5e-15  Score=104.60  Aligned_cols=58  Identities=41%  Similarity=0.684  Sum_probs=53.6

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+..
T Consensus        17 ~~~~~al~dy~~~----~~~eLsf~~Gd~i~v~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~   74 (78)
T 2ed0_A           17 LEKVVAIYDYTKD----KEDELSFQEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVESISG   74 (78)
T ss_dssp             SEEEEECSCBCCS----STTBCCBCSSCEEEEEEECSSSEEEEEETTEEEEEETTSEEECSS
T ss_pred             CEEEEECccCCcc----CcCcccccCCCEEEEEEeCCCCEEEEEECCcEEEeChHHEEEcCC
Confidence            3468999999999    788999999999999999899999999999999999999998864

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=99.63  E-value=8.1e-16  Score=102.07  Aligned_cols=55  Identities=35%  Similarity=0.533  Sum_probs=51.6

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.|+||+|||+.+
T Consensus        10 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~   64 (65)
T 3ulr_B           10 ITAIALYDYQAA----GDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELR   64 (65)
T ss_dssp             SCEEECSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEEEeeECCC----CcCEeeEecCCEEEEEEecCCCEEEEEECCcEEEEehHHeEEC
Confidence            458999999999    7889999999999999998899999999999999999999876

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=99.63  E-value=1.1e-15  Score=106.61  Aligned_cols=60  Identities=27%  Similarity=0.499  Sum_probs=54.3

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ....++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+...
T Consensus        16 ~~~~~~Alydy~a~----~~~eLsf~~Gd~i~Vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   75 (83)
T 1neg_A           16 GKELVLALYDYQEK----SPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLAAA   75 (83)
T ss_dssp             -CCEEEESSCBCCS----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCTT
T ss_pred             CceEEEEccccCCC----CCCccccCCCCEEEEEEecCCCEEEEEECCeEEEEEHHHEEECCCC
Confidence            34568999999999    7889999999999999998899999999999999999999998643

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.63  E-value=1.8e-15  Score=104.14  Aligned_cols=60  Identities=32%  Similarity=0.523  Sum_probs=54.8

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ....++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+...
T Consensus         6 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   65 (78)
T 2yuo_A            6 SGRRAKALLDFERH----DDDELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVEVLDER   65 (78)
T ss_dssp             CCEEEEESSCBCCS----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEECCC
T ss_pred             CceEEEECccCCCC----CCCCccCCCCCEEEEEEecCCCEEEEEECCCEEEEehHHEEECCCc
Confidence            34568999999999    7889999999999999998999999999999999999999998643

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=99.63  E-value=5.5e-16  Score=100.27  Aligned_cols=55  Identities=33%  Similarity=0.720  Sum_probs=50.3

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~  118 (225)
                      .+++|+|||.++    ..++|+|++||+|.|+.+.+++||.|+ .+|+.|+||+|||+.+
T Consensus         2 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   57 (57)
T 1cka_A            2 EYVRALFDFNGN----DEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY   57 (57)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC-
T ss_pred             cEEEECCcCCCC----CCCCCCCCCCCEEEEEEecCCCcEEEEeCCCCEEEEeHHHEEEC
Confidence            368899999999    788999999999999999889999999 7899999999999863

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=99.63  E-value=3.3e-16  Score=108.22  Aligned_cols=60  Identities=32%  Similarity=0.669  Sum_probs=54.6

Q ss_pred             ccceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         57 RRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        57 ~~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      .....++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+.+..
T Consensus        16 ~~~~~~~Alydy~a~----~~~eLsf~~Gd~I~Vl~~~~~gWw~g~~~g~~G~fP~nyV~~~~~   75 (79)
T 1z9q_A           16 MAAPRAEALFDFTGN----SKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKD   75 (79)
T ss_dssp             SSCCCEEESSCCCCS----STTBCCCCTTCCBCCCEESSSSEEEEEETTEEEEEEGGGEEESSC
T ss_pred             CCceEEEEcCccCCC----CCCcccccCCCEEEEeEecCCCEEEEEECCeEEEecHHHEEECCC
Confidence            345568999999999    788999999999999999899999999999999999999998753

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=99.62  E-value=1.3e-15  Score=98.78  Aligned_cols=54  Identities=28%  Similarity=0.373  Sum_probs=50.9

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .++|+|||.++    ..++|+|++||+|.|+.+.+.+||.|..+|+.|+||+|||+..
T Consensus         3 ~a~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~   56 (58)
T 4e6r_A            3 PAFVXFAYVAE----REDELSLVXGSRVTVMEXCSDGWWRGSYNGQIGWFPSNYVLEE   56 (58)
T ss_dssp             EEEECSCBCCC----STTBCCBCTTCEEEEEEECTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECccCCCC----CCCEeeEeCCCEEEEeEcCCCCEEEEEECCcEEEEehHHEEEC
Confidence            47899999999    7889999999999999999999999999999999999999875

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=99.62  E-value=1.4e-15  Score=101.89  Aligned_cols=58  Identities=36%  Similarity=0.852  Sum_probs=53.6

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||++||+.+..
T Consensus         7 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 2dl3_A            7 GRPARAKFDFKAQ----TLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRTYIELLSG   64 (68)
T ss_dssp             SEEEEESSCBCCS----STTBCCBCTTCEEEEEECCSTTEEEEECSSCEEEEETTTEEECCS
T ss_pred             CcEEEECccCCCC----CcCCccCCCCCEEEEeEecCCCEEEEEECCCEEEEchHHEEECCC
Confidence            4568999999999    788999999999999999889999999999999999999998864

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=99.62  E-value=1.2e-15  Score=103.15  Aligned_cols=58  Identities=28%  Similarity=0.559  Sum_probs=53.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..++|+|++||+|.|+.+.+.+||.|+++|+.||||+|||+.++.
T Consensus        13 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   70 (72)
T 4glm_A           13 LTYGVALYRFQAL----EPNELDFEVGDKIRILATLEDGWLEGSLKGRTGIFPYRFVKLCPA   70 (72)
T ss_dssp             CCEEEESSCBCCC----STTBCCBCTTCEEEEEEECSTTEEEEEETTEEEEEEGGGEEEEC-
T ss_pred             CeEEEECccCCCC----CCCcCCCCCCCEEEEEEccCCCEEEEEECCcEEEEChHHeEECCC
Confidence            4568999999999    788999999999999999899999999999999999999998853

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=99.62  E-value=8.9e-16  Score=102.01  Aligned_cols=56  Identities=21%  Similarity=0.391  Sum_probs=51.4

Q ss_pred             eEEEEeecccC-CCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISS-RRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~-~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~  119 (225)
                      ..++|+|||.+ +    ..+||+|++||+|.|+.+.+++||.|+  .+|+.|+||+|||+.+.
T Consensus         6 ~~~~alydy~~~~----~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~   64 (65)
T 2j05_A            6 RRVRAILPYTKVP----DTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVG   64 (65)
T ss_dssp             CEEEESSCBCCCT----TSSBCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             cEEEEccccCCCC----CCCcCcCCCCCEEEEeEecCCCEEEEEECCCCCEEEEEhHHeEECc
Confidence            45899999999 7    788999999999999999889999999  68999999999999764

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=99.62  E-value=1.3e-15  Score=103.58  Aligned_cols=58  Identities=36%  Similarity=0.719  Sum_probs=53.7

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+.+..
T Consensus        13 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   70 (73)
T 3c0c_A           13 QPSCKALYDFEPE----NDGELGFREGDLITLTNQIDENWYEGMLHGQSGFFPLSYVQVLVP   70 (73)
T ss_dssp             SCEEEESSCBCCS----STTBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEEEEC
T ss_pred             CeEEEECccCCCC----CCCCccCcCCCEEEEEEecCCCEEEEEECCCEEEeChHHEEECCC
Confidence            4568999999999    788999999999999999899999999999999999999998753

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.62  E-value=9e-16  Score=103.66  Aligned_cols=59  Identities=25%  Similarity=0.385  Sum_probs=53.9

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEec---CCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV---DKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~---~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.   +.+||.|+.+|+.||||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   67 (71)
T 2cre_A            6 SGLLARALYDNCPD----CSDELAFSRGDILTILEQHVPESEGWWKCLLHGRQGLAPANRLQILSG   67 (71)
T ss_dssp             CCEEEEESSCCCCS----SSSBCCCCSSCCEEEEESCCTTSTTEEEEESSSCCEEEETTTEEECCC
T ss_pred             CcEEEEECcccCcC----CCCCCCCCCCCEEEEeEcCCCCCCCcEEEEECCCEEEEehHHEEECCC
Confidence            34578999999999    7889999999999999987   88999999999999999999998754

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=99.62  E-value=1.2e-15  Score=100.49  Aligned_cols=55  Identities=36%  Similarity=0.678  Sum_probs=51.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~  117 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+..|+.||||+|||+.
T Consensus         5 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~   59 (62)
T 1uj0_A            5 ARRVRALYDFEAV----EDNELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVTT   59 (62)
T ss_dssp             CEEEEESSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEES
T ss_pred             CeEEEECccCCCC----CcCCcCCCCCCEEEEEEeCCCCEEEEEECCCEEEechhHEEE
Confidence            3568999999999    788999999999999999889999999999999999999975

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=1.1e-15  Score=102.44  Aligned_cols=58  Identities=28%  Similarity=0.448  Sum_probs=53.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+..
T Consensus         7 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 1x2p_A            7 GEEFVAIADYAAT----DETQLSFLRGEKILILRQTTADWWWGERAGCCGYIPANHVGKHSG   64 (68)
T ss_dssp             CCEEEESSCCCCS----STTBCCCCTTCEEEEEECCSSSEEEEECTTCCEEEESSSEECCCC
T ss_pred             CCEEEECceECCC----CcCCcCCCCCCEEEEEEcCCCCEEEEEECCeEEEEehHHeEECCC
Confidence            3568999999999    788999999999999999889999999999999999999998754

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=99.62  E-value=8.2e-16  Score=105.38  Aligned_cols=59  Identities=27%  Similarity=0.601  Sum_probs=53.6

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECC---eEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNA---MIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g---~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|++.+   +.|+||+|||+.+..
T Consensus         9 ~~~~~~alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~G~~P~~yv~~~~~   70 (76)
T 2ed1_A            9 KVRRVKTIYDCQAD----NDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILSD   70 (76)
T ss_dssp             CCEEEEESSCCCCS----SSSBCCCCSSCEEEESSCCSSSEEEEEETTCTTCEEEEEGGGEEECCC
T ss_pred             CCeEEEECccCCCC----CcCCcCcCCCCEEEEEEecCCCEEEEEECCCCCCEEEEehHHeEECCC
Confidence            35679999999999    788999999999999998899999999876   999999999999864

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.62  E-value=3e-15  Score=103.47  Aligned_cols=61  Identities=20%  Similarity=0.388  Sum_probs=54.3

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC-----CeEEEeeCCcEEeecCCC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN-----AMIGLFPFNYVEIIPYDK  122 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~-----g~~G~~P~nyv~~~~~~~  122 (225)
                      +..+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+..     |+.||||+|||+.+....
T Consensus         6 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~~~~G~fP~~yv~~~~~~~   71 (80)
T 1ue9_A            6 SGEIAQVTSAYVAS----GSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSS   71 (80)
T ss_dssp             CCEEEEECSCCCCC----STTBCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECCSCC
T ss_pred             CCeEEEECcccCCC----CCCCCCCCCCCEEEEEEecCCCcEEEEECCCCCCCcEEEEchHHeEECCCCC
Confidence            35679999999999    78899999999999999988999999975     489999999999986543

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=99.62  E-value=1.3e-15  Score=103.48  Aligned_cols=58  Identities=45%  Similarity=0.756  Sum_probs=53.7

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+..
T Consensus         7 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (73)
T 2dbm_A            7 GPCCRALYDFEPE----NEGELGFKEGDIITLTNQIDENWYEGMLHGHSGFFPINYVEILVA   64 (73)
T ss_dssp             CCEEEESSCBCCC----STTCCCBCTTCEEECCBCSSSSEEEEEETTEEEEEESSSEEESSC
T ss_pred             CCEEEEccccCCC----CCCCccCCCCCEEEEEEecCCCEEEEEECCCEEEechHHEEEccC
Confidence            4568999999999    788999999999999999889999999999999999999998754

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=1.5e-15  Score=106.30  Aligned_cols=60  Identities=27%  Similarity=0.449  Sum_probs=54.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe--cCCCeEEEEECCeEEEeeCCcEEeecCCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ--VDKNWYEGEHNAMIGLFPFNYVEIIPYDK  122 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~--~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~  122 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+  .+.+||.|+++|+.|+||+|||+.+....
T Consensus         8 ~~~~~al~dy~~~----~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~fP~~yv~~~~~~~   69 (85)
T 2dlp_A            8 SGYVIALRSYITD----NCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGLFPADIVQPAAAPD   69 (85)
T ss_dssp             CCEEEESSCBCCS----SSSBCCBCTTCEEEECCCSCCCTTEEEEESSSCEEEEETTSEEECCCSC
T ss_pred             CEEEEECCCCCcc----CcCCccCcCCCEEEEEEccCCCCCeEEEEECCEEEEechHHeEECCCcC
Confidence            4578999999999    788999999999999987  88899999999999999999999986543

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=2.7e-15  Score=103.80  Aligned_cols=59  Identities=15%  Similarity=0.233  Sum_probs=54.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+...
T Consensus         8 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   66 (80)
T 2ekh_A            8 ATSYMTCSAYQKV----QDSEISFPAGVEVQVLEKQESGWWYVRFGELEGWAPSHYLVLDENE   66 (80)
T ss_dssp             CEEEEECSCBCCS----STTSCCBCTTCEEEEEEECTTSEEEEEETTEEEEEETTTEECCCCC
T ss_pred             CCEEEECCCCCCC----CCCccCcCCCCEEEEEEeCCCCeEEEEECCCEEEEEhHHeEECCCC
Confidence            3468999999999    7889999999999999999999999999999999999999988643

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.61  E-value=1.1e-15  Score=103.07  Aligned_cols=59  Identities=32%  Similarity=0.596  Sum_probs=53.5

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEec--CCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~--~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.  +.+||.|+.+|+.||||+|||+.+..
T Consensus         6 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~   66 (70)
T 2da9_A            6 SGDYCKVIFPYEAQ----NDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDNFVKLLSG   66 (70)
T ss_dssp             SSEEEEECSCCCCS----STTBCCCCTTEEEEEEECCCSSTTEEEEECSSCEEEEEGGGEEECCC
T ss_pred             CCcEEEECcCCCCC----CcCEeeEcCCCEEEEEECCCCCCCeEEEEECCcEEEechHHeEECCC
Confidence            34578999999999    7889999999999999985  78999999999999999999998864

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=99.61  E-value=1.4e-15  Score=99.67  Aligned_cols=56  Identities=30%  Similarity=0.491  Sum_probs=51.4

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEE-EeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIG-LFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G-~~P~nyv~~~~  119 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.| |||+|||+.++
T Consensus         4 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~gG~~P~~yv~~~~   60 (61)
T 1y0m_A            4 SAVKALFDYKAQ----REDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEEMI   60 (61)
T ss_dssp             CCEEESSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEEGGGEEECC
T ss_pred             CEEEECcCCCcC----CCCCcCCcCCCEEEEEEecCCCEEEEEECCeEEEEEChHHcEECC
Confidence            348899999999    788999999999999999889999999999886 99999999874

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=1.9e-15  Score=103.54  Aligned_cols=59  Identities=29%  Similarity=0.593  Sum_probs=53.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+...
T Consensus        10 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   68 (76)
T 2epd_A           10 VVEAVACFAYTGR----TAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGT   68 (76)
T ss_dssp             CEEEEESSCEECS----STTBCEECTTCEEEEEEEEETTEEEEEETTEEEEEESSSEECCSSC
T ss_pred             CEEEEECcCCCCC----CCCccCCCCCCEEEEEEeCCCCEEEEEECCcEEEEehHHEEEcCCC
Confidence            3568999999999    7889999999999999998899999999999999999999988643

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=99.61  E-value=1e-15  Score=100.70  Aligned_cols=55  Identities=24%  Similarity=0.437  Sum_probs=50.9

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeec
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~  119 (225)
                      .++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+  .+|+.|+||+|||+.+.
T Consensus         5 ~~~al~~y~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~fP~~yv~~~~   61 (62)
T 2fpe_A            5 THRAIFRFVPR----HEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVT   61 (62)
T ss_dssp             CEEECSCBCCS----STTBCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             EEEECccCCcc----CcCcCcCCCCCEEEEEEecCCCEEEEEECCCCCEEEechHHEEECc
Confidence            47899999999    788999999999999999999999999  68999999999999863

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=99.61  E-value=1e-15  Score=103.87  Aligned_cols=55  Identities=38%  Similarity=0.695  Sum_probs=51.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~  117 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||++
T Consensus        17 ~~~~~Alydy~a~----~~~eLsf~~Gd~i~Vl~~~~~gWw~g~~~g~~G~fP~~yV~~   71 (72)
T 2l0a_A           17 ARKVRAIYDFEAA----EDNELTFKAGEIITVLDDSDPNWWKGETHQGIGLFPSNFVTA   71 (72)
T ss_dssp             CEEEEESSCBCCS----STTBCCBCTTCEEEEEEEEETTEEEEECSSCEEECTTCCEEE
T ss_pred             CeEEEECCccCCC----CCCccCCCCCCEEEEEEecCCCEEEEEECCCEEEechhhCcc
Confidence            4568999999999    788999999999999998889999999999999999999975

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=99.61  E-value=1.2e-15  Score=101.15  Aligned_cols=55  Identities=27%  Similarity=0.531  Sum_probs=50.6

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC--------CeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN--------AMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~--------g~~G~~P~nyv~~~  118 (225)
                      .+++|+|||.++    ..++|+|++||+|.|+.+.+++||.|+..        |+.||||+|||+.+
T Consensus         2 ~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l   64 (65)
T 2oaw_A            2 ELVLALYDYQEK----SPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVKKL   64 (65)
T ss_dssp             EEEEECSCBCCS----STTBCCBCTTCEEEEEECCSSSEEEEEEEEEETTEEEEEEEEEEGGGEEEC
T ss_pred             cEEEEcccCCcc----CCCCCCCCCCCEEEEEEcCCCCEEEEEEccccCCCcCCcEEEEchHHeEEc
Confidence            358899999999    78899999999999999989999999965        89999999999876

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=99.61  E-value=2.2e-15  Score=101.75  Aligned_cols=59  Identities=22%  Similarity=0.397  Sum_probs=53.5

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEEE--CCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGEH--NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~~--~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..++|+|++||+|.|+.+. +++||.|+.  +|+.||||+|||+.+..
T Consensus         5 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (71)
T 2jt4_A            5 SKKRGIVQYDFMAE----SQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRD   66 (71)
T ss_dssp             CCEEEEECSCBCCS----STTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEETTT
T ss_pred             CCCEEEEcccCCCC----CCCcccCCCCCEEEEEECCCCCCCEEEEECCCCCeEEechHHeEECCC
Confidence            34678999999999    7889999999999999987 889999998  89999999999998764

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=99.61  E-value=2e-15  Score=101.97  Aligned_cols=58  Identities=31%  Similarity=0.507  Sum_probs=52.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe--cCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ--VDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~--~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.+.    ..+||+|++||+|.|+.+  .+++||.|+ .+|+.||||+|||+.+..
T Consensus         6 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   66 (71)
T 1u5s_A            6 LHVVQTLYPFSSV----TEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSD   66 (71)
T ss_dssp             SSEEEESSCCCCC----SSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCC
T ss_pred             cEEEEEcccCCCC----CCCcccCCCCCEEEEEECCCCCCCCEEEEeCCCCEEEEeHHHEEECCC
Confidence            4568999999999    788999999999999998  688999997 889999999999999864

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=99.61  E-value=2.1e-15  Score=102.63  Aligned_cols=58  Identities=28%  Similarity=0.505  Sum_probs=52.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC--CeEEEeeCCcEEeecCC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~--g~~G~~P~nyv~~~~~~  121 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+..  |+.||||+|||+.+...
T Consensus         6 ~~~~Alydy~a~----~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~~yv~~~~~~   65 (73)
T 2lcs_A            6 QRAVALYDFEPE----NDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQPE   65 (73)
T ss_dssp             EEEEESSCBCCS----STTBCCBCTTCEEEEEEEETTTEEEEECTTSSCEEEEESTTEEECCSS
T ss_pred             CEEEECccCCCC----CCCccCCcCCCEEEEEEEcCCCEEEEEECCCCCEEEeeHHHEEECCCC
Confidence            458999999999    78899999999999999999999999974  89999999999998543

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=99.61  E-value=5.7e-16  Score=106.50  Aligned_cols=71  Identities=23%  Similarity=0.375  Sum_probs=62.6

Q ss_pred             CCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCCCCCCcCCCCcCcEEEcccccCCCccccccccc
Q psy15850         76 NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKE  154 (225)
Q Consensus        76 ~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~els~~~g  154 (225)
                      +.+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+....        ....++|+|+|.++.++||+|...
T Consensus         4 ~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~--------~~~~~~alydy~a~~~dElsf~~~   74 (77)
T 2jmc_A            4 GPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSGT--------GKELVLALYDYQESGDNAPSYSPP   74 (77)
T ss_dssp             SSCCCCCCTTCEEECCCCCCSSCCCEEETTEEECCCGGGEEECCCSS--------CCCEEEESSCCCCSSCCCCCSCCC
T ss_pred             CCCccCCCCCCEEEEEEecCCCEEEEEECCcEEEEEeeEEEEcCCCC--------CCceEEECCCcCCCCCCccccCCC
Confidence            67899999999999999988999999999999999999999885421        135789999999999999999764

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=99.61  E-value=1.9e-15  Score=101.00  Aligned_cols=58  Identities=36%  Similarity=0.653  Sum_probs=52.6

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECC--eEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNA--MIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g--~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+..+  +.|+||+|||+.+..
T Consensus         6 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   65 (67)
T 2o9s_A            6 TGEAIAKFNFNGD----TQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKR   65 (67)
T ss_dssp             SEEEEECSCBCCS----STTBCCBCTTCEEEEEEECSSSEEEEECTTSSCEEEEEGGGEEEEEC
T ss_pred             CEEEEECccCCcC----CcCccCCCCCCEEEEEEecCCCEEEEEECCCCCEEEEChHHeEECCC
Confidence            4568999999999    788999999999999999889999999765  999999999998764

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=99.60  E-value=2e-15  Score=98.52  Aligned_cols=55  Identities=22%  Similarity=0.421  Sum_probs=50.4

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEe-cCCCeEEEEE--CCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ-VDKNWYEGEH--NAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~--~g~~G~~P~nyv~~~  118 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+ .+++||.|+.  +|+.||||+|||+.+
T Consensus         3 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~l   60 (60)
T 2v1q_A            3 ERGIVQYDFMAE----SQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV   60 (60)
T ss_dssp             CEEEECSCBCCC----STTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             cEEEEeeeECCC----CCCCccCCCCCEEEEEeCCCCCCCEEEEECCCCCEEEEEHHHEEEC
Confidence            468999999999    788999999999999998 4889999998  899999999999864

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=99.60  E-value=2e-15  Score=101.38  Aligned_cols=57  Identities=28%  Similarity=0.419  Sum_probs=52.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE-CCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~-~g~~G~~P~nyv~~~~  119 (225)
                      ...++|+|||.++    ..++|+|++||+|.|+.+.+.+||.|+. +|+.||||+|||+...
T Consensus         6 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (69)
T 4esr_A            6 APTVVALYDYTAN----RSDELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASET   63 (69)
T ss_dssp             CCEEEESSCBCCC----STTBCCBCTTCEEEEEEECSSSEEEEEEETTEEEEEEGGGEEEHH
T ss_pred             cCEEEECccCCCC----CcCcCCCCCCCEEEEEEecCCCeEEEEeCCCCEEEEchHHeEECc
Confidence            4568999999999    7889999999999999998899999997 8999999999999763

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=99.60  E-value=1.3e-15  Score=102.35  Aligned_cols=59  Identities=27%  Similarity=0.429  Sum_probs=53.9

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+..
T Consensus         7 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   65 (69)
T 2dil_A            7 GAQEYRALYDYTAQ----NPDELDLSAGDILEVILEGEDGWWTVERNGQRGFVPGSYLEKLSG   65 (69)
T ss_dssp             CCCEEECCSCBCCS----SSSSCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGCCBCCC
T ss_pred             CCcEEEECccCCcc----CcCccCCCCCCEEEEEECCCCCEEEEEECCCEEEEehHHeEEcCC
Confidence            34568999999999    788999999999999999889999999999999999999998754

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=99.60  E-value=1.1e-15  Score=104.27  Aligned_cols=60  Identities=37%  Similarity=0.574  Sum_probs=51.9

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEEECCeEEEeeCCcEEeecCCCC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGEHNAMIGLFPFNYVEIIPYDKI  123 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~  123 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+. +.+||.|+++|+.|+||+|||+.+..+|+
T Consensus        10 ~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~w~   70 (74)
T 1gbq_A           10 MEAIAKYDFKAT----ADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPEF   70 (74)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEECCBCSSCSSEEEEEETTEEEEEEGGGEEEEC----
T ss_pred             eEEEECccCCCC----CCCeeeEcCCCEEEEeEecCCCCEEEEEECCCEEEEehHhEEEcCCccc
Confidence            458999999999    7889999999999999887 66899999999999999999999877665

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=99.60  E-value=2e-15  Score=102.48  Aligned_cols=57  Identities=25%  Similarity=0.453  Sum_probs=52.5

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEee
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII  118 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~  118 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.  +|+.||||+|||+.+
T Consensus        14 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~   72 (73)
T 3h0h_A           14 GVTLFVALYDYEAI----TEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV   72 (73)
T ss_dssp             TTCEEEESSCBCCS----STTBCCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCEEEEECccCCCC----CCCcceEeCCCEEEEEEecCCCeEEEEECCCCCEEEEEHHHeEEC
Confidence            34678999999999    7889999999999999998899999997  899999999999876

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=99.60  E-value=2e-15  Score=99.70  Aligned_cols=56  Identities=29%  Similarity=0.594  Sum_probs=50.7

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~  118 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.  +|+.||||+|||+.+
T Consensus         6 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~   63 (64)
T 4f14_A            6 LRTYRAMYDYSAQ----DEDEVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFV   63 (64)
T ss_dssp             --CEEESSCBCCC----STTBCCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CEEEEECeeeCCc----CCCcCCCCCCCEEEEEEeCCCCeEEEEECCCCCEEEEeHHHeEEC
Confidence            3458899999999    7889999999999999998899999997  899999999999876

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=99.60  E-value=2.5e-15  Score=102.03  Aligned_cols=58  Identities=28%  Similarity=0.513  Sum_probs=53.7

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..++|+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+..
T Consensus         5 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   62 (73)
T 3thk_A            5 KELVLALYDYQEK----SPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDP   62 (73)
T ss_dssp             CCEEEECSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECCC
T ss_pred             CEEEEECcCCCcC----CCCccCCCCCCEEEEEECCCCCeEEEEECCcEEEEehHHeEECCC
Confidence            3568999999999    788999999999999999889999999999999999999998864

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.60  E-value=5e-16  Score=104.14  Aligned_cols=58  Identities=33%  Similarity=0.525  Sum_probs=53.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+..
T Consensus         7 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (68)
T 1wi7_A            7 GRRCQVAFSYLPQ----NDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSG   64 (68)
T ss_dssp             CCCEEESSCBCCS----STTBCCBCTTCEECCCEEEETTEEEECSTTCCEEEETTSEEECCS
T ss_pred             CCEEEECccCCcC----CCCCccCcCCCEEEEEEcCCCCeEEEEECCcEEEEchHHEEECCC
Confidence            3468999999999    788999999999999998889999999999999999999998864

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=3.4e-15  Score=102.98  Aligned_cols=61  Identities=30%  Similarity=0.571  Sum_probs=55.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKI  123 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~  123 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||++||+.+.....
T Consensus         7 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~~~   67 (79)
T 2yun_A            7 GRLCKALYSFQAR----QDDELNLEKGDIVIIHEKKEEGWWFGSLNGKKGHFPAAYVEELPSNAG   67 (79)
T ss_dssp             SEEEEESSCBCCS----STTBCCBCTTCEEEEEECCSSSCEEEESSSCEEEECSTTEEEESSCSS
T ss_pred             CCEEEECccCCcC----CCCCcCCCCCCEEEEEEcCCCCEEEEEECCCEEEEEhHHeEECCCCCC
Confidence            3468999999999    788999999999999999889999999999999999999999875443

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.60  E-value=2.4e-15  Score=107.08  Aligned_cols=60  Identities=35%  Similarity=0.623  Sum_probs=54.0

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEec--CCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~--~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.  +.+||.|+++|+.||||+|||+.+...
T Consensus         4 ~~~~~~Alydy~a~----~~~eLsf~~Gd~i~v~~~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   65 (93)
T 1uff_A            4 GSSGYRALYPFEAR----NHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSS   65 (93)
T ss_dssp             SCCCEEESSCBCCC----SSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECCSS
T ss_pred             CCEEEEECccCCCC----CCCCcCCCCCCEEEEeEccCCCCCEEEEEECCCEEEechHHeEEcCCc
Confidence            34568999999999    7889999999999999875  789999999999999999999998654

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=99.60  E-value=1.3e-15  Score=101.91  Aligned_cols=57  Identities=23%  Similarity=0.338  Sum_probs=50.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.++ ++||.|+ .+|+.||||+|||+.+..
T Consensus         4 ~~~~~Alydy~a~----~~~ELsf~~Gd~i~vl~~~-~~Ww~~~~~~g~~G~~Psnyv~~~~~   61 (67)
T 2b86_A            4 EVIVIAKWDYTAQ----QDQELDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVERKLE   61 (67)
T ss_dssp             CEEEEESSCBCCS----STTSCCBCTTCEEEEEECS-SSSCEEECTTSCEEECCCCSEEEC--
T ss_pred             CeEEEEeeeECCC----CCCccccCCCCEEEEEecC-CCeEEEEeCCCCEEEeChHHEeEcCC
Confidence            4568999999999    7889999999999999984 7999999 689999999999998753

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=99.60  E-value=1.7e-15  Score=99.61  Aligned_cols=55  Identities=24%  Similarity=0.527  Sum_probs=49.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~  118 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.++ ++||.|+  .+|+.||||+|||+.+
T Consensus         6 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~   62 (62)
T 2iim_A            6 DNLVIALHSYEPS----HDGDLGFEKGEQLRILEQS-GEWWKAQSLTTGQEGFIPFNFVAKA   62 (62)
T ss_dssp             TCEEEESSCBCCC----STTBCCBCTTCEEEEEECC-SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CcEEEEcccCCCC----CCCCcCCCCCCEEEEEEcC-CCEEEEEECCCCCEEEEEHHHEEEC
Confidence            4578999999999    7889999999999999985 5999999  5899999999999864

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=99.60  E-value=1.6e-15  Score=97.00  Aligned_cols=52  Identities=33%  Similarity=0.571  Sum_probs=48.1

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecC-CCeEEEEECCeEEEeeCCcEE
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD-KNWYEGEHNAMIGLFPFNYVE  116 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~-~~Ww~g~~~g~~G~~P~nyv~  116 (225)
                      .++|+|||.++    ..+||+|++||+|.|+.+.+ ++||.|+.+|+.|+||+|||+
T Consensus         2 ~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~g~~G~~P~~yv~   54 (54)
T 2a28_A            2 AMEAIYAYEAQ----GDDEISIDPGDIITVIRGDDGSGWTYGECDGLKGLFPTSYCK   54 (54)
T ss_dssp             EEEBCSCBCCC----STTBCCBCTTCEEEEEECCCSSSEEEEEETTEEEEEEGGGBC
T ss_pred             EEEECccCCcC----CCCCccCCCCCEEEEEEecCCCCEEEEEECCeEEEeeHHHcC
Confidence            37899999999    78899999999999999885 799999999999999999984

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=99.60  E-value=1.9e-15  Score=102.20  Aligned_cols=57  Identities=23%  Similarity=0.418  Sum_probs=52.0

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~~  120 (225)
                      ..++|+|+|.++    ..+||+|++||+|.|+.+.+++||.|+  .+|+.|+||+|||+.+..
T Consensus         7 ~~~~al~~y~~~----~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~fP~~yv~~~~~   65 (71)
T 2fpf_A            7 QTHRAIFRFVPR----HEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTK   65 (71)
T ss_dssp             CCEEECSCBCCS----STTBCCBCTTCEEEEEEECTTSEEEEEETTTTEEEEEEGGGEEECC-
T ss_pred             eEEEECeeECcc----CCCcccCcCCcEEEEeEecCCCEEEEEECCCCCEEEeehHHEEECCC
Confidence            458899999999    788999999999999999999999999  789999999999998753

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=2.3e-15  Score=104.39  Aligned_cols=60  Identities=27%  Similarity=0.434  Sum_probs=54.7

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+...
T Consensus         9 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   68 (81)
T 2ysq_A            9 SIVSAEAVWDHVTM----ANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQ   68 (81)
T ss_dssp             CCEEEEESSCCCCS----SSSSCCCCTTCEEEEEECCSSSEEEEECSSCEEEEEGGGEEESSCC
T ss_pred             CceEEEEeeeECCC----CCCcCCCCCCCEEEEEEEcCcCEEEEEECCCEEEechHHEEEcCCc
Confidence            34578999999999    7889999999999999998999999999999999999999998643

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=3.6e-15  Score=102.93  Aligned_cols=57  Identities=33%  Similarity=0.504  Sum_probs=52.9

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+++|+.||||+|||+.+..
T Consensus        18 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   74 (79)
T 1x69_A           18 ITAVALYDYQAA----GDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVELRQS   74 (79)
T ss_dssp             CCEEESSCCCCS----SSSBCCCCTTCEEEEEEECSSSEEEEEETTEEEEEETTSEEECCC
T ss_pred             eEEEECccCCCC----CCCCcCcCCCCEEEEeEecCCCeEEEEECCcEEEechHHEEECCC
Confidence            458999999999    788999999999999999899999999999999999999998754

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=3.4e-15  Score=105.18  Aligned_cols=59  Identities=37%  Similarity=0.621  Sum_probs=53.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+..|+.||||+|||+.+...
T Consensus        17 ~~~~~Alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   75 (88)
T 1x2q_A           17 ARKVRALYDFEAV----EDNELTFKHGEIIIVLDDSDANWWKGENHRGIGLFPSNFVTTNLNI   75 (88)
T ss_dssp             CEEEEESSCCCCC----SSSCCCCCSSCEEEEEECSCSSSEEEEETTEEEEECGGGEESCSSC
T ss_pred             CeEEEEcccCCCC----CcCccCCCCCCEEEEEEeCCCCEEEEEECCcEEEEehHHEEEcCCc
Confidence            4568999999999    7889999999999999998899999999999999999999987543

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.59  E-value=2.9e-15  Score=103.84  Aligned_cols=58  Identities=29%  Similarity=0.480  Sum_probs=52.7

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe--cCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ--VDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~--~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+  .+.+||.|+.+|+.||||+|||+.+..
T Consensus        17 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   76 (81)
T 1x43_A           17 NRKARVLYDYDAA----NSTELSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPITYLELLNS   76 (81)
T ss_dssp             CEEEEESSCCCCS----STTBCCCCTTCEEEEECCTTCCTTEEEEEETTEEEEEEGGGEEECCC
T ss_pred             CeEEEEcccCCCC----CCCcCCCCCCCEEEEEEcCCCCCCcEEEEECCCEEEEehHHEEECCC
Confidence            3568999999999    788999999999999998  468999999999999999999999864

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.59  E-value=7.5e-16  Score=104.52  Aligned_cols=58  Identities=29%  Similarity=0.444  Sum_probs=52.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEE-ecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRR-QVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~-~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+. ..+.+||.|+++|+.|+||+|||+.+..
T Consensus        10 ~~~~~alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   68 (72)
T 1ugv_A           10 FRKAKALYACKAE----HDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLSG   68 (72)
T ss_dssp             CCCEEESSCBCCC----SSSBCCBCTTCEEBSCCBCSSTTEEEEESSSCEEEEEGGGEEECCS
T ss_pred             ccEEEEccccCCc----CCCEeCCcCCCEEEEEEecCCCCeEEEEECCcEEEecHHHEEECCC
Confidence            3468999999999    78899999999999887 4678999999999999999999999864

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.59  E-value=4.5e-15  Score=104.57  Aligned_cols=60  Identities=25%  Similarity=0.366  Sum_probs=54.6

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDK  122 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~  122 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.+....
T Consensus        17 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~~   76 (88)
T 2cub_A           17 NMPAYVKFNYMAE----REDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYVTEEGDSP   76 (88)
T ss_dssp             CEEEEESSCCCCC----STTBCCCCTTEEEEEEEECTTSEEEEEETTEEEEEEGGGEEECCCCC
T ss_pred             CCEEEEccccCCC----CCCCcCCCCCCEEEEEEccCCCeEEEEECCcEEEEehHHEEECCCcc
Confidence            3458999999999    78899999999999999989999999999999999999999986543

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.59  E-value=1.2e-15  Score=101.99  Aligned_cols=57  Identities=30%  Similarity=0.601  Sum_probs=49.4

Q ss_pred             cceEEEEeecccCCCCCCCCcc-ccccCCCeEEEEEe-cCCCeEEEE--ECCeEEEeeCCcEEee
Q psy15850         58 RRKYLQELHDISSRRHTDNFTE-LSFKKGDIIFVRRQ-VDKNWYEGE--HNAMIGLFPFNYVEII  118 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~e-Ls~~~Gdii~v~~~-~~~~Ww~g~--~~g~~G~~P~nyv~~~  118 (225)
                      +..+++|+|||.++    ..++ |+|++||+|.|+.. .+++||.|+  .+|+.||||+|||+.+
T Consensus         6 ~~~~~~al~dy~~~----~~~e~Lsf~~Gd~i~v~~~~~~~gW~~g~~~~~g~~G~fP~~yv~~l   66 (67)
T 3rnj_A            6 GRMRVKAIFSHAAG----DNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVL   66 (67)
T ss_dssp             CCCEEEESSCBCCC----SCTTBCCBCTTCEEEECSSSCBTTEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCeEEEEccccCCC----CCCCCccCCCCCEEEEeeccCCCCCEEEEECCCCCEEEEEHHHeEEC
Confidence            34578999999998    5555 99999999999854 677999999  6899999999999986

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.59  E-value=2.5e-15  Score=102.12  Aligned_cols=58  Identities=31%  Similarity=0.611  Sum_probs=52.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEec--CCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~--~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.  +.+||.|+.+|+.||||+|||+.+..
T Consensus         7 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   66 (73)
T 2dm1_A            7 GGTAVARYNFAAR----DMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVEEEGI   66 (73)
T ss_dssp             SSEEEESSCBCCC----STTBCCBCTTCEEECCBSSSSSSSCEEEEETTEEEEECSSSEEECCC
T ss_pred             CCEEEECccCCcC----CCCcCCCCCCCEEEEEEecCCCCCeEEEEECCeEEEeehHHEEEcCC
Confidence            3468999999999    7889999999999999887  45999999999999999999999754

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.59  E-value=1.3e-15  Score=102.39  Aligned_cols=54  Identities=35%  Similarity=0.730  Sum_probs=49.0

Q ss_pred             EEEEeecccCCCCCCCCc-cccccCCCeEEEEEecC-----CCeEEEEE-CCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFT-ELSFKKGDIIFVRRQVD-----KNWYEGEH-NAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~-eLs~~~Gdii~v~~~~~-----~~Ww~g~~-~g~~G~~P~nyv~~~  118 (225)
                      +++|+|+|.|+    +.+ ||+|++||+|.|+.+.+     .+||.|+. +|+.|+||+|||+.+
T Consensus         9 ~~~aly~y~a~----~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~G~~G~~PsnyV~~l   69 (69)
T 1nm7_A            9 FARALYDFVPE----NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   69 (69)
T ss_dssp             CEEECSCCCCS----STTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEETTTEEEEECGGGEEEC
T ss_pred             EEEEEecccCC----CCCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeCCCCEEEecHHHEEEC
Confidence            57899999999    677 99999999999999875     49999998 899999999999864

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.59  E-value=2.5e-15  Score=103.70  Aligned_cols=58  Identities=22%  Similarity=0.323  Sum_probs=52.8

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC----CCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD----KNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~----~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+    .+||.|+.+|+.||||+|||+.+..
T Consensus        13 ~~~~~Alydy~~~----~~~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   74 (79)
T 1uhc_A           13 NQVYFAVYTFKAR----NPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTES   74 (79)
T ss_dssp             SCCEEESSCBCCC----SSSBCCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEECCS
T ss_pred             CeEEEECccCCCC----CCCccCCCCCCEEEEEECCCCCCCCCeEEEEeCCCEEEEchHHeEECCC
Confidence            3468999999999    78899999999999999876    8999999999999999999998753

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.59  E-value=2.1e-15  Score=100.81  Aligned_cols=55  Identities=18%  Similarity=0.391  Sum_probs=51.3

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~  118 (225)
                      ..++|+|||.++    ..++|+|++||+|.|+.+.+++||.|+ .+|+.||||+|||+.+
T Consensus         3 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   58 (67)
T 1gl5_A            3 EIVVAMYDFQAT----EAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGK   58 (67)
T ss_dssp             SCEEECSCBCCS----SSSBCCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESS
T ss_pred             eEEEECccCCCC----CCCeecCCcCCEEEEEEccCCCcEEEEECCCCEEEEEhHhEEEc
Confidence            358899999999    788999999999999999889999999 6899999999999987

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=99.59  E-value=4.2e-15  Score=97.92  Aligned_cols=57  Identities=21%  Similarity=0.324  Sum_probs=50.8

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe-cCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ-VDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+ .+.+||.|+.+|+.||||+|||+.+.
T Consensus         5 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~W~~~~~~g~~G~~P~~yv~~~~   62 (63)
T 3eg3_A            5 PNLFVALYDFVAS----GDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPVN   62 (63)
T ss_dssp             TTEEEESSCBCCC----SSSBCCBCTTCEEEEEEECTTSSEEEEEETTEEEEEEGGGEEESC
T ss_pred             CEEEEEcceECCC----CCCccCCCCCCEEEEEEeCCCCCeEEEEECCCeEEEehHHeEECC
Confidence            4568999999999    788999999999999985 45679999999999999999999863

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.59  E-value=1.1e-15  Score=103.42  Aligned_cols=57  Identities=21%  Similarity=0.372  Sum_probs=52.2

Q ss_pred             eEEEEeecccC-CCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISS-RRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~-~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~~  120 (225)
                      ..++|+|||.+ +    ..+||+|++||+|.|+.+.+++||.|+  .+|+.|+||+|||+.+..
T Consensus         8 ~~~~Alydy~~~~----~~~eLsf~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~   67 (71)
T 2gqi_A            8 RRVRAILPYTKVP----DTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVSG   67 (71)
T ss_dssp             CCEEESSCCCCCT----TSSCCCCCTTCBCCCCEECSSSCEEEECTTTCCEEEECTTSEEECCC
T ss_pred             CEEEECcccCCCC----CCCCCCCCCCCEEEEEEecCCCEEEEEECCCCCEEEeeHHHEEECCC
Confidence            45899999999 7    788999999999999999899999999  789999999999998754

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=99.58  E-value=4.6e-15  Score=99.67  Aligned_cols=57  Identities=26%  Similarity=0.409  Sum_probs=51.5

Q ss_pred             eEEEEeeccc-CCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC--CeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDIS-SRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~-~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~--g~~G~~P~nyv~~~~~  120 (225)
                      ..++|+|||. ++    ..+||+|++||+|.|+.+.+++||.|+..  |+.||||+|||+.+..
T Consensus         3 ~~~~alydy~~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~   62 (69)
T 1ruw_A            3 PKFEAAYDFPGSG----SSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKD   62 (69)
T ss_dssp             SEEEESSCBCCCS----CTTBCCBCTTCEEEEEEECTTSEEEEEETTSSCEEEEEGGGEEECCS
T ss_pred             cEEEEccccCCCC----CCCcccCCCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEEcCC
Confidence            3588999996 88    78899999999999999988999999976  9999999999998753

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=2e-15  Score=104.45  Aligned_cols=59  Identities=29%  Similarity=0.514  Sum_probs=53.2

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC--CCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD--KNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~--~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+  .+||.|+.+|+.||||+|||+.+..
T Consensus        16 ~~~~~~al~dy~~~----~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   76 (80)
T 2d8h_A           16 QPIEVTALYSFEGQ----QPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPANYVTMNSG   76 (80)
T ss_dssp             SCEEEECSSCEECS----STTBCEECTTCEEEEEECCSCSSSEEEEEETTEEEEEEGGGCCBCCC
T ss_pred             CCEEEEECccCCcC----CCCeeeEcCCCEEEEeECcCCCCCeEEEEECCEEEEEchhHeEEcCC
Confidence            34568999999999    78899999999999999875  8999999999999999999998754

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=99.58  E-value=2e-15  Score=100.84  Aligned_cols=57  Identities=28%  Similarity=0.549  Sum_probs=51.0

Q ss_pred             ceEEEEeecccC-CCCCCCCccccccCCCeEEEEEe-cCCCeEEEEEC--CeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISS-RRHTDNFTELSFKKGDIIFVRRQ-VDKNWYEGEHN--AMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~-~~~~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~~--g~~G~~P~nyv~~~~  119 (225)
                      ..+++|+|||.| +    ..+||+|++||+|.|+.+ .+++||.|+..  |+.||||+|||+.+.
T Consensus         6 ~~~~~al~dy~a~~----~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   66 (67)
T 2kxc_A            6 KQKVKTIFPHTAGS----NKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLLE   66 (67)
T ss_dssp             CCEEEESSCBCCSS----CSSBCCBCTTCEEEESSSSCBTTEEEEEESSSCCEEEEEGGGEEESC
T ss_pred             CEEEEEeecCCCCC----CCCCCcCCCCCEEEEeECCCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            456899999996 7    788999999999999986 78899999977  999999999999864

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.58  E-value=1.3e-15  Score=104.31  Aligned_cols=58  Identities=38%  Similarity=0.615  Sum_probs=53.6

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+++|+.||||++||+.+.
T Consensus         9 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~   66 (76)
T 1ujy_A            9 HQLIVKARFNFKQT----NEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIK   66 (76)
T ss_dssp             CCEEEECCSCBCCS----STTSCCBCSSCCEEESSCCSSSCEEEEETTEEEEECTTTSEECC
T ss_pred             CCEEEEECccCCcC----CCCcccCCCCCEEEEEEecCCCEEEEEECCCEEEechHHEEECC
Confidence            34568999999999    78899999999999999888999999999999999999999875

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=99.58  E-value=3.2e-15  Score=97.25  Aligned_cols=54  Identities=30%  Similarity=0.537  Sum_probs=49.8

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC--CeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~--g~~G~~P~nyv~~~  118 (225)
                      .++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+..  |+.|+||++||+.+
T Consensus         3 ~~~al~d~~~~----~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~   58 (59)
T 1yn8_A            3 RAVALYDFEPE----NDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYI   58 (59)
T ss_dssp             EEEECSCBCCC----STTBCCBCTTCEEEEEEEEETTEEEEECTTSSCEEEEEGGGEEEC
T ss_pred             EEEECccCCCC----CCCCcCCCCCCEEEEEEcCCCCeEEEEECCCCCEEEEehHHeEEC
Confidence            48899999999    78899999999999999988999999964  89999999999876

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=99.58  E-value=1.8e-15  Score=98.87  Aligned_cols=56  Identities=27%  Similarity=0.478  Sum_probs=51.3

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+ +++||.|+ .+|+.||||+|||+.+..
T Consensus         2 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~-~~~Ww~~~~~~g~~G~~P~~yv~~~~~   58 (60)
T 1i07_A            2 KYAKSKYDFVAR----NSSELSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMRT   58 (60)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEEECGG-GCCEEEEECTTSCEEEEEGGGEEEECC
T ss_pred             eEEEECccCCCC----CCCcccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEEHHHeEEccC
Confidence            468999999999    788999999999999998 88999998 689999999999998754

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.58  E-value=2e-15  Score=102.29  Aligned_cols=58  Identities=26%  Similarity=0.497  Sum_probs=52.1

Q ss_pred             ceEEEEeecccC-CCCCCCCccccccCCCeEEEEEe-cCCCeEEEEEC--CeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISS-RRHTDNFTELSFKKGDIIFVRRQ-VDKNWYEGEHN--AMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~-~~~~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~~--g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.+ +    ..+||+|++||+|.|+.+ .+.+||.|+..  |+.||||+|||+.+..
T Consensus         7 ~~~~~al~dy~a~~----~~~eLs~~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~   68 (72)
T 1spk_A            7 GQKVKTIFPHTAGN----NKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSG   68 (72)
T ss_dssp             SCEEECSSCBCCSS----CSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSS
T ss_pred             ceEEEEeeeeCCCC----CCCCCcCCCCCEEEEeEccCCCCcEEEEECCCCCEEEEehHHeEECCC
Confidence            456899999996 7    788999999999999987 78899999987  9999999999999864

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=2.2e-15  Score=103.23  Aligned_cols=62  Identities=34%  Similarity=0.501  Sum_probs=52.2

Q ss_pred             ceEEEEeecccCCCCCC---CCccccccCCCeEEEEEecC-CCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTD---NFTELSFKKGDIIFVRRQVD-KNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~---~~~eLs~~~Gdii~v~~~~~-~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++..+.   ..+||+|++||+|.|+.+.+ ++||.|+++|+.||||+|||+.+..
T Consensus         7 ~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~   72 (76)
T 2csi_A            7 GRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSNFLEEVSG   72 (76)
T ss_dssp             SEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSEEEEEETTEEEEEEGGGCCBCCC
T ss_pred             ccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCeEEEEECCcEEEEehHHEEECCC
Confidence            45689999999983111   17899999999999998866 4899999999999999999998754

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=99.58  E-value=7.2e-16  Score=109.60  Aligned_cols=61  Identities=36%  Similarity=0.596  Sum_probs=55.4

Q ss_pred             ccceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         57 RRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        57 ~~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ....+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.+...
T Consensus        16 ~~~~~~~Alydy~a~----~~~eLsf~~Gd~i~V~~~~~~gWw~g~~~g~~G~fPsnyV~~~~~~   76 (92)
T 2o2o_A           16 RRRRRCQVAFSYLPQ----NDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGE   76 (92)
T ss_dssp             CSSCEEEECSCBCCC----SSSCCCBCSSCEEECCCGGGSSCBCCEETTEECCBCSSSEECCSSC
T ss_pred             CCCeEEEEccccCCC----CCccccccCCCEEEEeEecCCCEEEEEECCeEEEeehHHEEECCCC
Confidence            345679999999999    7889999999999999988899999999999999999999998654

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.58  E-value=3.7e-15  Score=100.71  Aligned_cols=55  Identities=25%  Similarity=0.439  Sum_probs=50.0

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEE-ecCCCeEEEE-ECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRR-QVDKNWYEGE-HNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~-~~~~~Ww~g~-~~g~~G~~P~nyv~~~  118 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+. ..+++||.|+ .+|+.||||+|||+..
T Consensus        12 ~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   68 (71)
T 1csk_A           12 TECIAKYNFHGT----AEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKR   68 (71)
T ss_dssp             EEEEESSCBCCS----STTBCCBCTTCEEEEEEECSSTTEEEEECTTSCEEEEETTSEEC-
T ss_pred             CEEEEceeECcC----CCCcCCCCCCCEEEEeECCCCCCCEEEEeCCCCEEEEehHHeEEc
Confidence            458999999999    78899999999999998 6788999999 7899999999999875

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=99.58  E-value=3.3e-15  Score=103.17  Aligned_cols=58  Identities=22%  Similarity=0.459  Sum_probs=52.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.  +|+.|+||+|||+.+..
T Consensus         5 ~~~~~Alydy~~~----~~~eLs~~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   64 (79)
T 3cqt_A            5 STLFEALYDYEAR----TEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVDR   64 (79)
T ss_dssp             CCCEEESSCBCCC----STTBCCBCTTCEEEEEECTTSSEEEEEETTTCCEEEEEGGGEEEC--
T ss_pred             CcEEEECccCCCC----CcCcCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEeehHHeEECCc
Confidence            3468999999999    7889999999999999998999999998  89999999999999864

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=2.2e-15  Score=101.49  Aligned_cols=58  Identities=17%  Similarity=0.308  Sum_probs=53.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+..
T Consensus         8 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   65 (70)
T 2ega_A            8 LEQYVVVSNYKKQ----ENSELSLQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNS   65 (70)
T ss_dssp             CBCEECCSCCCCC----SSSSCCCCTTCBCEEEEECTTSEEEEECSSCEEEEEGGGCEESCC
T ss_pred             CcEEEECceECCC----CCCcccCCCCCEEEEEEccCCCeEEEEECCCEEEEehHHcEECCC
Confidence            3458899999999    788999999999999999899999999999999999999998754

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=99.58  E-value=3.8e-15  Score=99.85  Aligned_cols=58  Identities=24%  Similarity=0.330  Sum_probs=52.5

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.++ ++||.|+ .+|+.||||+|||+.+..
T Consensus         6 ~~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~   64 (68)
T 1wxt_A            6 SGLKMQVLYEFEAR----NPRELTVVQGEKLEVLDHS-KRWWLVKNEAGRSGYIPSNILEPLSG   64 (68)
T ss_dssp             CCEEEEESSCBCCC----SSSBCCBCTTCEEEEEECS-SSEEEEECTTSCEEEEEGGGEECCCC
T ss_pred             CCeEEEECceECCC----CcCcCCCCCCCEEEEEEcC-CCEEEEEECCCCEEEEEhHHcEECCC
Confidence            34568999999999    7889999999999999984 8999999 899999999999998754

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=99.58  E-value=4.9e-15  Score=96.02  Aligned_cols=53  Identities=28%  Similarity=0.514  Sum_probs=48.8

Q ss_pred             EEEEeecc-cCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC--CeEEEeeCCcEEe
Q psy15850         61 YLQELHDI-SSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPFNYVEI  117 (225)
Q Consensus        61 ~~~al~d~-~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~--g~~G~~P~nyv~~  117 (225)
                      .++|+||| .++    ..++|+|++||+|.|+.+.+++||.|+..  |+.||||+|||+.
T Consensus         2 ~~~al~d~~~~~----~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~   57 (58)
T 1zuy_A            2 MFEAAYDFPGSG----SPSELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP   57 (58)
T ss_dssp             EEEESSCBCCCS----CTTBCCBCTTCEEEEEEECTTSEEEEEESSCSCEEEEEGGGEEC
T ss_pred             EEEEecccCCCC----CCCcCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEecHHHEEE
Confidence            47899999 788    78899999999999999989999999976  9999999999975

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=99.58  E-value=4.1e-15  Score=100.15  Aligned_cols=57  Identities=37%  Similarity=0.659  Sum_probs=51.9

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECC--eEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNA--MIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g--~~G~~P~nyv~~~~~  120 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+..+  +.||||+|||+.+..
T Consensus         8 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ecz_A            8 GEAIAKFNFNGD----TQVEMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVISG   66 (70)
T ss_dssp             BCEEESSCCCCC----STTBCCCCTTCBCEEEEEEETTEEEEEETTTTEEEEECTTTEEESSS
T ss_pred             CEEEECccCCCC----CcCCcCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHEEECCC
Confidence            458899999999    788999999999999998888999999865  999999999998864

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.58  E-value=4.3e-15  Score=101.24  Aligned_cols=59  Identities=37%  Similarity=0.551  Sum_probs=52.9

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+ +++||.|+.+|+.||||+|||+.+...
T Consensus         9 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~g~~G~~P~~yv~~~~~~   67 (74)
T 1j3t_A            9 ENLKAQALCSWTAK----KDNHLNFSKHDIITVLEQ-QENWWFGEVHGGRGWFPKSYVKIIPGS   67 (74)
T ss_dssp             CCCEEEESSCBCCC----STTBCCBCTTCEEEEEEE-CSSEEEEESTTCCCEEEGGGEEECCCS
T ss_pred             CCeEEEECCCCCCC----CCCccCCCCCCEEEEEec-CCCEEEEEECCcEEEEchHHeEECCCC
Confidence            34568999999999    788999999999999998 478999999999999999999998643

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.57  E-value=2.9e-15  Score=100.65  Aligned_cols=58  Identities=29%  Similarity=0.512  Sum_probs=52.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeE-EEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMI-GLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~-G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+..+.. ||||+|||+.+..
T Consensus         7 ~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~~P~~yv~~~~~   65 (69)
T 2eqi_A            7 GRTVKALYDYKAK----RSDELTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISG   65 (69)
T ss_dssp             CCEEEESSCBCCC----SSSCCCBCTTCEEESCCCCSSSCEEEEETTEEEEEECGGGEEECCS
T ss_pred             CcEEEECeeECCC----CcCccCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEchHHcEECcc
Confidence            4568999999999    78899999999999999888999999988776 9999999998754

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.57  E-value=3.7e-15  Score=96.63  Aligned_cols=51  Identities=20%  Similarity=0.338  Sum_probs=47.8

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecC-CCeEEEEE--CCeEEEeeCCcEE
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD-KNWYEGEH--NAMIGLFPFNYVE  116 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~-~~Ww~g~~--~g~~G~~P~nyv~  116 (225)
                      ++|+|||.++    ..+||+|++||+|.|+.+.+ ++||.|+.  +|+.||||+|||+
T Consensus         4 ~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~~~g~~G~~P~~yv~   57 (58)
T 1zuu_A            4 NKVLYAYVQK----DDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   57 (58)
T ss_dssp             CEECSCBCCC----STTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             EEEeeeECCc----CCCcccCCCCCEEEEeEcCCCCCCEEEEECCCCCEEEEEHHHEE
Confidence            6899999999    78899999999999999886 79999998  9999999999997

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.57  E-value=1.6e-15  Score=102.05  Aligned_cols=57  Identities=30%  Similarity=0.490  Sum_probs=52.0

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+ +.+||.|+.+|+.||||+|||+.+..
T Consensus         8 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~g~~G~~P~~yv~~~~~   64 (69)
T 1uhf_A            8 GEEYIALYPYSSV----EPGDLTFTEGEEILVTQK-DGEWWTGSIGDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             SEEEECSSCBCCS----SSSBCCBCTTCEEEECEE-ETTEEEECSTTCCEEECGGGCEECCC
T ss_pred             CCEEEEeeeECCC----CcCccCCCCCCEEEEEEe-CCCEEEEEeCCcEEEEchHHeEECCC
Confidence            4568999999999    788999999999999988 78999999999999999999998754

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=4.6e-15  Score=100.20  Aligned_cols=58  Identities=19%  Similarity=0.245  Sum_probs=53.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+..|+.||||+|||+.+..
T Consensus         8 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~   65 (71)
T 2dnu_A            8 EEKYVTVQPYTSQ----SKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKKAKD   65 (71)
T ss_dssp             SEEEECSSCBCCS----STTBCCBCTTCEEEECCCCSSSEEEEEETTEEEEEEGGGCEECCC
T ss_pred             CCEEEECCccCCC----CCCCCcCCCCCEEEEeECCCCCeEEEEECCcEEEEEHHHeEEccC
Confidence            3568999999999    788999999999999998889999999999999999999998864

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=99.56  E-value=2.4e-15  Score=104.88  Aligned_cols=58  Identities=28%  Similarity=0.443  Sum_probs=51.8

Q ss_pred             cceEEEEeecc-cCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC------CeEEEeeCCcEEeec
Q psy15850         58 RRKYLQELHDI-SSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN------AMIGLFPFNYVEIIP  119 (225)
Q Consensus        58 ~~~~~~al~d~-~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~------g~~G~~P~nyv~~~~  119 (225)
                      ...+++|+||| .++    ..+||+|++||+|.|+.+.+++||.|++.      |+.||||+|||+.++
T Consensus        17 ~~~~~~Alydy~~a~----~~~eLsf~~GDiI~V~~~~~~gWw~G~~~~~~~~tg~~G~fPsnyV~~~~   81 (83)
T 2ke9_A           17 GSLKVRALKDFWNLH----DPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEVVS   81 (83)
T ss_dssp             CCEEEEESSCBCCCS----CTTBCCBCTTCEEEESCSSCSSCEEEEECCSSTTSCCCEEECGGGEESSC
T ss_pred             CCeEEEEccccCCCC----CCCcccccCCCEEEEEEecCCCeEEEEECCCCCCCCCEEEechHHEEECC
Confidence            34579999999 788    78899999999999999988999999974      799999999999864

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=99.56  E-value=5.1e-15  Score=104.54  Aligned_cols=55  Identities=29%  Similarity=0.557  Sum_probs=50.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEec-----CCCeEEEEE-CCeEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-----DKNWYEGEH-NAMIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-----~~~Ww~g~~-~g~~G~~P~nyv~~  117 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.     +++||.|+. +|+.||||+|||++
T Consensus        29 ~~~~~Alydy~a~----~~~ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~~g~~G~fP~nyV~p   89 (89)
T 2rf0_A           29 GPVWTAVFDYEAA----GDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVAP   89 (89)
T ss_dssp             CCEEEECSCBCCS----STTBCCBCTTCEEEEEECCHHHHSSTTEEEEECTTCCEEEEEGGGEEC
T ss_pred             CcEEEECCccCCC----CCCccccCCCCEEEEEeccCCcccCCCEEEEEECCCCEEEEcHHHCcC
Confidence            4578999999999    7889999999999999985     789999998 99999999999974

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=99.56  E-value=4.1e-15  Score=99.56  Aligned_cols=57  Identities=25%  Similarity=0.500  Sum_probs=52.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~  119 (225)
                      ...++|+|||.++    ..++|+|++||+|.|+.+.+++||.|+ .+|+.||||+|||+.+.
T Consensus        10 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   67 (68)
T 1s1n_A           10 GEEYIAVGDFTAQ----QVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYS   67 (68)
T ss_dssp             CEEEEECSCBCCS----SSSCCCBCSSEEEEECSCCSSSEEEEECSSSCEEEEESTTEEECC
T ss_pred             CCEEEEcccCCCC----CCCcCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEehHHeEECc
Confidence            4568899999999    788999999999999999888999999 79999999999999864

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=99.56  E-value=3.4e-15  Score=97.45  Aligned_cols=54  Identities=37%  Similarity=0.647  Sum_probs=48.0

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecC-CCeEEEEEC-CeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD-KNWYEGEHN-AMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~-~~Ww~g~~~-g~~G~~P~nyv~~~  118 (225)
                      .++|+|||.++    ..+||+|++||+|.|+.+.+ ++||.|+.. |+.||||+|||+.+
T Consensus         5 ~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~~g~~G~~P~~yv~~l   60 (60)
T 2x3w_D            5 RVRALYDYDGQ----EQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI   60 (60)
T ss_dssp             EEEECSCBCCS----SSSBCCBCTTCEEEECSCCCSSSEEEEECSSCCEEEEEGGGEEC-
T ss_pred             EEEECcccCcc----CCCcccCCCCCEEEEEEccCCCCceEEEeCCCCEEEecHHHEEEC
Confidence            48899999999    78899999999999998754 599999987 99999999999864

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=99.56  E-value=6.9e-15  Score=102.76  Aligned_cols=59  Identities=25%  Similarity=0.432  Sum_probs=54.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~~~  121 (225)
                      ..+++|+|||.++    ..++|+|++||+|.|+.+.+.+||.|+.  +|+.|+||+|||+.+...
T Consensus         6 ~~~~~Alydy~a~----~~~eLsf~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   66 (84)
T 4ag1_C            6 VTLFVALYDYNAT----RWTDLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVDSI   66 (84)
T ss_dssp             CCEEEESSCBCCS----BTTBCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEETTTC
T ss_pred             CEEEEEcccCCCC----CCCcccccCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEECCCc
Confidence            4578999999999    7889999999999999998899999998  899999999999998654

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=8.9e-15  Score=98.44  Aligned_cols=58  Identities=28%  Similarity=0.466  Sum_probs=52.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.  +|+.||||+|||+.+..
T Consensus         7 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ct3_A            7 GTPYRAMYQYRPQ----NEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVSG   66 (70)
T ss_dssp             CEEEEESSCBCCS----STTBCCBCTTEEEEEEEECSSSCEEEEESSSCCEEEECTTTEEETTC
T ss_pred             CcEEEECccCCcC----CcCCccCCCCCEEEEEEECCCCEEEEEECCCCCEEEechHHeEECCC
Confidence            3468999999999    7889999999999999998999999997  48999999999998754

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.56  E-value=6.1e-15  Score=101.90  Aligned_cols=58  Identities=33%  Similarity=0.682  Sum_probs=52.3

Q ss_pred             cceEEEEeecccCCCCCCCCc-cccccCCCeEEEEEecCC-----CeEEEEE-CCeEEEeeCCcEEeec
Q psy15850         58 RRKYLQELHDISSRRHTDNFT-ELSFKKGDIIFVRRQVDK-----NWYEGEH-NAMIGLFPFNYVEIIP  119 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~-eLs~~~Gdii~v~~~~~~-----~Ww~g~~-~g~~G~~P~nyv~~~~  119 (225)
                      ...+++|+|||.++    ..+ ||+|++||+|.|+.+.+.     +||.|+. +|+.||||+|||+.+.
T Consensus        13 ~~~~~~alydy~~~----~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   77 (80)
T 2v1r_A           13 KLEFARALYDFVPE----NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIK   77 (80)
T ss_dssp             GCEEEEESSCBCCS----STTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC-
T ss_pred             cCEEEEECccCCCC----CCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEeCCCCeEEEEHHHeEEcC
Confidence            45679999999999    788 999999999999998876     9999997 8999999999999875

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.56  E-value=2.5e-15  Score=107.64  Aligned_cols=64  Identities=20%  Similarity=0.364  Sum_probs=53.7

Q ss_pred             cceEEEEeecccCCCCC--CCCccccccCCCeEEEE-EecCCCeEEEEE-CCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDISSRRHT--DNFTELSFKKGDIIFVR-RQVDKNWYEGEH-NAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~--~~~~eLs~~~Gdii~v~-~~~~~~Ww~g~~-~g~~G~~P~nyv~~~~~~  121 (225)
                      ...+++|+|||.++..+  ...+||+|++||+|.|+ .+.+++||.|++ +|+.||||+|||+.+...
T Consensus        16 ~~~~~~Alydy~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~g~~G~~Psnyv~~~~~~   83 (96)
T 1wie_A           16 KVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDN   83 (96)
T ss_dssp             CEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCCSC
T ss_pred             CCcEEEECCccCCCcccCCCCCCeeeECCCCEEEEeEecCCCCEEEEEECCCCEEEEchHHEEEcCCC
Confidence            34678999999998200  01789999999999999 778889999998 899999999999987643

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=99.56  E-value=3.7e-15  Score=100.31  Aligned_cols=58  Identities=28%  Similarity=0.445  Sum_probs=52.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+  .+|+.||||++||+.+..
T Consensus         7 ~~~~~al~~y~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2cuc_A            7 GNMFVALHTYSAH----RPEELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVSG   66 (70)
T ss_dssp             SCCEECCSCBCCC----STTBCCBCTTCEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECCC
T ss_pred             CcEEEECeeECcC----CCCcCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHeEECcC
Confidence            3468999999999    788999999999999999888999999  789999999999998754

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=99.56  E-value=1e-14  Score=103.25  Aligned_cols=59  Identities=31%  Similarity=0.499  Sum_probs=53.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe--cCCCeEEEE-ECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ--VDKNWYEGE-HNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~--~~~~Ww~g~-~~g~~G~~P~nyv~~~~~~  121 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+  .+.+||.|+ .+|+.||||+|||+.+...
T Consensus        17 ~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~   78 (91)
T 1wx6_A           17 LHVVQTLYPFSSV----TEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG   78 (91)
T ss_dssp             CEEEEESSCCCCS----SSSBCCCCTTCEEEEEECCSSCTTEEEEECTTCCEEEEEGGGEEEEEES
T ss_pred             cEEEEEeecCCcC----CCCcccCCCCCEEEEEECCCCCCCcEEEEeCCCCEEEEchHHEEECCCc
Confidence            4568999999999    788999999999999998  678999999 7899999999999998643

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.56  E-value=5.2e-15  Score=102.12  Aligned_cols=57  Identities=19%  Similarity=0.458  Sum_probs=52.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+ +++||.|+.  +|+.||||+|||+.+..
T Consensus        17 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~-~~gW~~g~~~~~g~~G~fP~~yv~~~~~   75 (79)
T 1x6b_A           17 LPQVEITKAFFAK----QADEVTLQQADVVLVLQQ-EDGWLYGERLRDGETGWFPEDFARFISG   75 (79)
T ss_dssp             CCEEEESSCCCCC----SSSBCCCCTTEEEEEEEE-ETTEEEEEETTTCCEEEECGGGCEEEES
T ss_pred             CCEEEECeeECCC----CcCCcCCCCCCEEEEEEe-CCCEEEEEECCCCCEEEEchHHEEECCC
Confidence            3468999999999    788999999999999999 889999998  89999999999999864

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.55  E-value=8e-15  Score=103.67  Aligned_cols=58  Identities=33%  Similarity=0.538  Sum_probs=53.2

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC--CeEEEeeCCcEEeecCC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN--AMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~--g~~G~~P~nyv~~~~~~  121 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+..  |+.||||+|||+.+...
T Consensus        18 ~~~~alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~~~   77 (90)
T 2yup_A           18 GEAVAQYTFKGD----LEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSREP   77 (90)
T ss_dssp             EEEEECSCCCCC----SSSBCCCCTTCEEEESSCCCSSEEEEECTTTCCEEEEEGGGEEEEECC
T ss_pred             eEEEEeecCCcC----CcCcCCCCCCCEEEEEEEcCCCeEEEEECCCCCEEEEehHHeEEcCCC
Confidence            458999999999    78899999999999999888999999976  99999999999998754

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=99.55  E-value=8.2e-15  Score=98.23  Aligned_cols=58  Identities=26%  Similarity=0.424  Sum_probs=51.6

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.++ ++||.|+ .+|+.||||+|||+.+..
T Consensus         7 ~~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~   65 (68)
T 2k2m_A            7 ALKWVLCNYDFQAR----NSSELSVKQRDVLEVLDDS-RKWWKVRDPAGQEGYVPYNILTPYPA   65 (68)
T ss_dssp             CCCEEEESSCBCCC----SSSBCCBCTTCEEEEEECS-SSEEEEECTTSCCEEEEGGGEEECCS
T ss_pred             CCEEEEECccCCCC----CCCcccCCCCCEEEEEEcC-CCeEEEEeCCCCEEEEEhhhEEEcCC
Confidence            34578999999999    7889999999999999985 7999998 579999999999998753

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.55  E-value=1.1e-14  Score=133.53  Aligned_cols=120  Identities=18%  Similarity=0.193  Sum_probs=92.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeecC----CCC-CCCc----
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPY----DKI-RTAP----  127 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~~----~~~-~~~~----  127 (225)
                      ...++|+|||.++    +.+||+|++||+|.|+++.+++||.|+.  +|+.||||+|||+....    +|+ ..++    
T Consensus        85 ~~~~~alyd~~~~----~~~el~~~~gd~i~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~l~~~~wy~g~i~r~~a  160 (535)
T 2h8h_A           85 VTTFVALYDYESR----TETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRES  160 (535)
T ss_dssp             --CEEESSCBCCC----SSSBCCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEETTSGGGSTTBCCSCCHHHH
T ss_pred             CcEEEEccccCCc----CCCcCCcCCCCEEEEEEecCCCceEEEECCCCcceEecchhhcccccccccceeccccCHHHH
Confidence            3458999999999    7889999999999999999999999998  89999999999998642    233 1111    


Q ss_pred             ------CCCCcCcEEEcccccCCCcccccccc-----ccceEEecccc-ccc-cc------ccchhhhhhccch
Q psy15850        128 ------KKLSEGQARAKFNFVAQTHLELSLVK-----ESPHKYVDSEV-TLQ-YR------RPVRNEIKELISE  182 (225)
Q Consensus       128 ------~~~~~~~~~a~~~~~~~~~~els~~~-----g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~  182 (225)
                            .....|.|+++.+....+.+.|++..     |..|+++.... ..| |.      |.++.+|+++|..
T Consensus       161 e~~L~~~~~~~G~FLvR~S~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~i~~~~~F~SL~eLv~~y~~  234 (535)
T 2h8h_A          161 ERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSK  234 (535)
T ss_dssp             HHHHTCTTCCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEBC-CCSCEEEETTEEESSHHHHHHHHHH
T ss_pred             HHHhccCCCCCCeEEEEecCCCCCcEEEEEEeeccCCCCceEEEEEEEcCCCcEEeeccccccChHHhheeecc
Confidence                  11245899999998888999999985     56677665432 222 22      7888899888754

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.55  E-value=9.7e-15  Score=100.08  Aligned_cols=58  Identities=29%  Similarity=0.474  Sum_probs=52.6

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC---CeE------EEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN---AMI------GLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~---g~~------G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+..   |+.      ||||+|||+.+..
T Consensus         7 ~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~~   73 (77)
T 2d8j_A            7 GQYFVALFDYQAR----TAEDLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDSG   73 (77)
T ss_dssp             CEEEEESSCBCCS----SSSBCCBCTTCCEEEEECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEEECCC
T ss_pred             CCEEEEccCCCCC----CCCccCCCCCCEEEEEECCCCCeEEEEECCCCCcCcccCCceEECHHHeeEcCC
Confidence            4578999999999    78899999999999999988999999976   888      9999999998753

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=99.55  E-value=5.9e-15  Score=107.82  Aligned_cols=57  Identities=19%  Similarity=0.371  Sum_probs=50.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe-cCCC--eEEEEEC--------CeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ-VDKN--WYEGEHN--------AMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~-~~~~--Ww~g~~~--------g~~G~~P~nyv~~~~  119 (225)
                      ...++|+|||.++    +.+||+|++||+|.|+.+ .+.+  ||.|++.        |+.||||+|||+.+.
T Consensus        22 ~~~~~Alydy~a~----~~~ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~~   89 (108)
T 1i1j_A           22 ISMAVALQDYMAP----DCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQ   89 (108)
T ss_dssp             SEEEEESSCBCCS----STTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEE
T ss_pred             eeEEEECCccCCC----CCCccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEcc
Confidence            4568999999999    788999999999999988 3444  9999977        899999999999875

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=8.9e-15  Score=100.69  Aligned_cols=58  Identities=14%  Similarity=0.302  Sum_probs=52.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC-CCeEEEEEC-CeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD-KNWYEGEHN-AMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~-~~Ww~g~~~-g~~G~~P~nyv~~~~~  120 (225)
                      +..++|+|||.++    ..+||+|++||+|.|+.+.+ .+||.|+.. |+.||||+|||+.+..
T Consensus        13 ~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   72 (78)
T 2dl5_A           13 PLTCKVVYSYKAS----QPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPTS   72 (78)
T ss_dssp             SEEEEECSCBCCC----STTBCCBCSSEEEEEEECCSSSSEEEEECTTCCEEEEETTTSCCSCC
T ss_pred             CcEEEEceeECCC----CCCCCCCCCCCEEEEEeccCCCCcEEEEeCCCCEEEEEhHHEEECCC
Confidence            4568999999999    78899999999999999875 899999976 9999999999998753

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=99.54  E-value=7.5e-15  Score=99.40  Aligned_cols=56  Identities=29%  Similarity=0.464  Sum_probs=51.0

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE---CCeE---EEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH---NAMI---GLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~---~g~~---G~~P~nyv~~~~  119 (225)
                      ..+++|+|||.++    ..+||+|++||+|.| .+.+++||.|+.   +|+.   ||||+|||+.+.
T Consensus        10 ~~~~~alydy~~~----~~~eLs~~~Gd~i~v-~~~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~~   71 (72)
T 2kgt_A           10 GPKYVGLWDFKSR----TDEELSFRAGDVFHV-ARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE   71 (72)
T ss_dssp             CCEEECCTTCBCS----STTSCBCCTTCCEEE-EEECSSCEEEEEECTTSCEEEEEEECTTTSEEEC
T ss_pred             CcEEEEcccCCCC----CcCCcCCCCCCEEEE-eeCCCCEEEEEEcCCCCCEeCCcEEcHhHEEEcc
Confidence            3568999999999    788999999999999 888899999997   7999   999999998763

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=99.54  E-value=1.2e-14  Score=103.15  Aligned_cols=59  Identities=32%  Similarity=0.661  Sum_probs=53.4

Q ss_pred             cceEEEEeecccCCCCCCCCc-cccccCCCeEEEEEecCC-----CeEEEEE-CCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFT-ELSFKKGDIIFVRRQVDK-----NWYEGEH-NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~-eLs~~~Gdii~v~~~~~~-----~Ww~g~~-~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+ ||+|++||+|.|+.+.+.     +||.|+. +|+.||||+|||+.+..
T Consensus        13 ~~~~~~alydy~~~----~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~~~g~~G~~P~~yv~~~~~   78 (92)
T 1jqq_A           13 KLEFARALYDFVPE----NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIKR   78 (92)
T ss_dssp             TCEEEEESSBBCCS----STTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEETTSCEEEEEGGGEEECCC
T ss_pred             cCEEEEECccCCCC----CCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEeCCCCEEEEehHHeEECCC
Confidence            35679999999999    788 999999999999998876     9999998 89999999999999864

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=99.54  E-value=8.9e-15  Score=99.14  Aligned_cols=57  Identities=23%  Similarity=0.369  Sum_probs=51.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE-CCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~-~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+ +++||.|+. +|+.||||+|||+.+..
T Consensus         7 ~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~~~~   64 (72)
T 2jw4_A            7 EVVVVAKFDYVAQ----QEQELDIKKNERLWLLDD-SKSWWRVRNSMNKTGFVPSNYVERKNS   64 (72)
T ss_dssp             CEEEECSSCCCCS----STTSCCCCTTCEEEEEEC-SSSSEEEECTTSCEEEECTTSCEECCC
T ss_pred             CeEEEECcCCCcC----CCCcccCCCCCEEEEEEC-CCCEEEEEECCCCEEEEEhhHEEEcCC
Confidence            4578999999999    788999999999999997 569999994 89999999999998753

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=99.54  E-value=2.2e-14  Score=94.69  Aligned_cols=61  Identities=25%  Similarity=0.468  Sum_probs=52.2

Q ss_pred             CCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCCCCCCCcCCCCcCcEEEcccccCC
Q psy15850         76 NFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQ  144 (225)
Q Consensus        76 ~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  144 (225)
                      +.+||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+...        .....++|+|+|.+.
T Consensus         2 ~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~--------~~~~~~~alydy~a~   62 (63)
T 1tuc_A            2 GPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDSG--------TGKELVLALYDYQEK   62 (63)
T ss_dssp             CCCCCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECSCS--------TTSCEEEECSCBCC-
T ss_pred             CccccCCCCCCEEEEEEecCCCEEEEEECCcEEEEeHHHEEEcCCC--------CCCccEEEeccccCC
Confidence            4679999999999999998999999999999999999999988542        123578999999875

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=2e-14  Score=100.59  Aligned_cols=56  Identities=16%  Similarity=0.323  Sum_probs=51.9

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~  119 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+ .+|+.||||+|||+.+.
T Consensus        20 ~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~   76 (85)
T 2yuq_A           20 TVVIALYDYQTN----DPQELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEKS   76 (85)
T ss_dssp             CEEEESSCCCCS----CSSBCCCCBTEEEEEEECCSSSEEEEECSSSCEEEEETTTCEECC
T ss_pred             eEEEECcCCCCC----CCCcCCCCCCCEEEEEEecCCCeEEEEECCCCEEEEehHHeEEcc
Confidence            568999999999    788999999999999999888999997 68999999999999864

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=9.8e-15  Score=97.82  Aligned_cols=57  Identities=26%  Similarity=0.422  Sum_probs=51.0

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+. ++||.|+ .+|+.||||+|||+.+..
T Consensus         7 ~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~   64 (68)
T 1wxb_A            7 GKYVKILYDFTAR----NANELSVLKDEVLEVLEDG-RQWWKLRSRSGQAGYVPCNILGEASG   64 (68)
T ss_dssp             CCCEECSSCBCCS----SSSBCCBCTTCEEEEEECS-SSEEEEECTTSCEEEEETTTCCBCCC
T ss_pred             CEEEEECccCCCC----CCCccCCCCCCEEEEEEcC-CCEEEEEECCCCEEEEEHHHeEECCC
Confidence            3468999999999    7889999999999999985 8999999 589999999999998753

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=2e-14  Score=99.19  Aligned_cols=58  Identities=17%  Similarity=0.311  Sum_probs=51.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~~~  121 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.. +.+||.|+.  +|+.||||+|||+.+..+
T Consensus        17 ~~~~~Alydy~a~----~~~eLs~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~~P~~yv~~~~~p   76 (79)
T 2cud_A           17 SDFLAVLSDYPSP----DISPPIFRRGEKLRVISD-EGGWWKAISLSTGRESYIPGICVARVSGP   76 (79)
T ss_dssp             CCEEEESSCSSCT----TTSCCSSCTTCEEEEEEE-ETTEEEEEETTTCCEEEEEGGGEEEECCC
T ss_pred             CeEEEEccCCCCC----CCCcCCCCCCCEEEEEec-CCCeEEEEECCCCCEEEeeHHHeEEccCC
Confidence            3468999999999    788999999999999984 679999995  589999999999987643

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.53  E-value=3.4e-14  Score=97.44  Aligned_cols=59  Identities=32%  Similarity=0.584  Sum_probs=52.3

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEE-ECCeEEEeeCCcEEeecCC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGE-HNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~-~~g~~G~~P~nyv~~~~~~  121 (225)
                      .+++|+|||.++.   ..+||+|++||+|.|+.+. +.+||.|+ .+|+.||||+|||+.+...
T Consensus        10 ~~~~al~dy~~~~---~~~eLs~~~Gd~i~v~~~~~~~gW~~g~~~~g~~G~~P~~yv~~~~~~   70 (77)
T 2enm_A           10 TKARVMYDFAAEP---GNNELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEILPND   70 (77)
T ss_dssp             EEEEESSCCCCCT---TSSBCCCCTTCEEEEEESCCSSSEEEEECTTCCEEEEETTTEEEECCC
T ss_pred             cEEEECccCCCCC---CCCeecCCCCCEEEEeEccCCCCeEEEEECCCCEEEeehHHeEECCCC
Confidence            5689999999971   4679999999999999985 78999999 8999999999999998643

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=99.53  E-value=1.7e-15  Score=101.26  Aligned_cols=58  Identities=28%  Similarity=0.459  Sum_probs=52.5

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeec
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~  119 (225)
                      ....++|+|||.++    ..++|+|++||+|.|+.+.+.+||.|+ .+|+.||||+|||+.+.
T Consensus         7 ~~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   65 (67)
T 1aww_A            7 ELKKVVALYDYMPM----NANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CCCEEEBSSCCCCS----SSSSCCCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSC
T ss_pred             CCeEEEECccCCCC----CCCCccCCCCCEEEEEEccCCCcEEEEECCCCEEEEchHhEEEcC
Confidence            34568999999999    788999999999999999889999998 78999999999998754

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.52  E-value=2.8e-14  Score=96.02  Aligned_cols=58  Identities=10%  Similarity=0.185  Sum_probs=51.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC-CCeEEEEEC-CeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD-KNWYEGEHN-AMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~-~~Ww~g~~~-g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+ ++||.|+.. |+.||||+|||+.+..
T Consensus         7 ~~~~~alydy~~~----~~~eLs~~~Gd~i~vl~~~~~~gW~~~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ct4_A            7 GGHCVAIYHFEGS----SEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTSG   66 (70)
T ss_dssp             SCEEEESSCBCCC----STTCCCBCTTCEEEEEECCSSSCEEEEECSSSCEEEEEGGGEEECCC
T ss_pred             CCEEEEcccCCCC----CCCcCCCCCCCEEEEEeccCCCCeEEEEeCCCCEEEEEhHHeEEcCC
Confidence            3468999999999    78899999999999998764 569999976 9999999999998754

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.52  E-value=3e-14  Score=97.34  Aligned_cols=56  Identities=18%  Similarity=0.300  Sum_probs=50.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE----CCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH----NAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~----~g~~G~~P~nyv~~~~  119 (225)
                      ...++|+|||.++     .+||+|++||+|.|+.+.+++||.|+.    +|+.||||+|||+.+.
T Consensus        10 ~~~~~alydy~~~-----~~eLs~~~Gd~i~vl~~~~~gWw~g~~~~~~~g~~G~~P~~yv~~~~   69 (75)
T 2egc_A           10 KDVYVSIADYEGD-----EETAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKN   69 (75)
T ss_dssp             CEEEEECSCBCCC-----SSSCCBCTTCEEEECEECTTSEEEEEECCSSSCEEEEEEGGGEEECC
T ss_pred             CeEEEECCCcCCC-----CCcCCCCCCCEEEEEEcCCCCeEEEEeCCCCCCcEEEEehHHCEECC
Confidence            4568999999986     459999999999999999999999997    5799999999999875

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=5.7e-14  Score=100.65  Aligned_cols=63  Identities=33%  Similarity=0.461  Sum_probs=52.0

Q ss_pred             ceEEEEeecccCCCCCC----CCccccccCCCeEEEEEe-cCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTD----NFTELSFKKGDIIFVRRQ-VDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~----~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ..+++|+|||.++..+.    ..+||+|++||+|.|+.+ ++++||.|+.+|+.||||+|||+.+...
T Consensus        17 ~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gWw~g~~~g~~G~~P~~yv~~~~~~   84 (97)
T 2csq_A           17 ARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQAD   84 (97)
T ss_dssp             CEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCEEEEEETTEEEEEETTTSEECCCC
T ss_pred             ceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEecCCCCeEEEEECCcEEEEehHHeEECCCC
Confidence            45689999999972111    266999999999999965 5578999999999999999999998643

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=99.52  E-value=1.9e-14  Score=96.88  Aligned_cols=57  Identities=25%  Similarity=0.451  Sum_probs=49.8

Q ss_pred             ceEEEEeecccCCCCCCCCc--cccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFT--ELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~--eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      +..++|+|||.++    ..+  +|+|++||+|.|+.+ +.+||.|+ .+|+.||||+|||+.+..
T Consensus         5 ~~~~~alydy~~~----~~~~~eLsf~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~~~~   64 (70)
T 2vkn_A            5 IYKAKALYPYDAD----DDDAYEISFEQNEILQVSDI-EGRWWKARRANGETGIIPSNYVQLIDG   64 (70)
T ss_dssp             EEEEEESSCBCCC----SSSTTBCCBCTTCEEEEECT-TSSEEEEECTTSCEEEEEGGGEEEEEE
T ss_pred             CEEEEECccCCCC----CCCCCcccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEehHHEEECCC
Confidence            4568999999998    444  999999999999886 68999998 689999999999998753

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=99.51  E-value=7.3e-15  Score=99.95  Aligned_cols=57  Identities=26%  Similarity=0.551  Sum_probs=51.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE---CCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~---~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..++|+|++||+|.|+.+. ++||.|+.   +|+.|+||+|||+.+..
T Consensus        11 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~-~~W~~g~~~~~~g~~G~~P~~yv~~~~~   70 (74)
T 2m0y_A           11 EKYGVAFYNYDAR----GADELSLQIGDTVHILETY-EGWYRGYTLRKKSKKGIFPASYIHLKEA   70 (74)
T ss_dssp             CSCEEECSEECCC----SSSBCCEETTEEEEEEEBS-SSCEEEEESSCSSCCEEECGGGEEECCC
T ss_pred             CeEEEEceeeCCC----CcCcccCCCCCEEEEEEcC-CCeEEEEECCCCCCEEEEehHHEEEecc
Confidence            4578999999999    7889999999999999985 78999997   79999999999998653

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=99.51  E-value=3.2e-14  Score=99.58  Aligned_cols=56  Identities=27%  Similarity=0.483  Sum_probs=51.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~  119 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+. ++||.|+.  +|+.||||+|||+.+.
T Consensus        25 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~   82 (86)
T 2oi3_A           25 DIIVVALYDYEAI----HHEDLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVD   82 (86)
T ss_dssp             SEEEEESSCCCCS----SSSCCCCCTTCEEEEEEES-SSEEEEEETTTCCEEEEEGGGEEEGG
T ss_pred             CcEEEECccCCCC----CCCcCcCCCCCEEEEEEcC-CCeEEEEECCCCCEEEEehHHcEEcc
Confidence            3568999999999    7889999999999999988 59999998  9999999999999874

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=99.51  E-value=4.9e-15  Score=108.23  Aligned_cols=58  Identities=24%  Similarity=0.446  Sum_probs=52.0

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeE---EEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMI---GLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~---G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+++|+.   |+||+|||+.+..
T Consensus         5 ~~~~~Alydy~a~----~~~ELsf~~Gd~i~vl~~~~~~Ww~g~~~g~~g~~G~fPsnYV~~~~~   65 (108)
T 2rqv_A            5 SLYAIVLYDFKAE----KADELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIIDI   65 (108)
T ss_dssp             CCCEEESSCCCCC----SSSBCCCCSSEEECCCCEETTTEEEECCSSSSCCCEEEESTTCBCCCS
T ss_pred             CeEEEECCCcCCC----CCCcCCcCCCCEEEEeEecCCCEEEEEECCccCCeeEeecceEEEecC
Confidence            4568999999999    78899999999999998889999999987766   9999999998753

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.51  E-value=3.4e-14  Score=127.51  Aligned_cols=119  Identities=18%  Similarity=0.200  Sum_probs=92.7

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeecC----CCC-CCCc-----
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPY----DKI-RTAP-----  127 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~~----~~~-~~~~-----  127 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+++.+++||.|+.  +|+.||||+|||+....    +|. ..++     
T Consensus         3 ~~~~al~~~~~~----~~~el~~~~gd~~~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~le~~~w~~g~~~r~~ae   78 (452)
T 1fmk_A            3 TTFVALYDYESR----TETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESE   78 (452)
T ss_dssp             EEEEESSCBCCC----SSSBCCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETTSGGGSTTEEETCCHHHHH
T ss_pred             eEEEECCccCCC----CCCCCCccCCCEEEEeccCCCCceEEEEcCCCcccccCcccccccccccccccccCCccHHHHH
Confidence            468899999999    7889999999999999998999999997  89999999999998642    222 1111     


Q ss_pred             -----CCCCcCcEEEcccccCCCcccccccc-----ccceEEecccc-ccc-cc------ccchhhhhhccch
Q psy15850        128 -----KKLSEGQARAKFNFVAQTHLELSLVK-----ESPHKYVDSEV-TLQ-YR------RPVRNEIKELISE  182 (225)
Q Consensus       128 -----~~~~~~~~~a~~~~~~~~~~els~~~-----g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~  182 (225)
                           .....|.|+++.+....+.+.|++..     |..|+++.... ..| |.      |.++.+|++++..
T Consensus        79 ~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~h~~I~~~~~g~~~~~~~~~F~Sl~~Li~~y~~  151 (452)
T 1fmk_A           79 RLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSK  151 (452)
T ss_dssp             HHHTCTTSCTTEEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSEESSHHHHHHHHTT
T ss_pred             HHhccCCCCCceEEEEeCCCCCCceEEEEEeeccCCCCcEEEEEEEEcCCCCEEEecCcccCCHHHHHHHhhh
Confidence                 11245999999998888999999985     66777765432 222 22      7888999888765

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=99.51  E-value=5.3e-14  Score=107.72  Aligned_cols=60  Identities=35%  Similarity=0.519  Sum_probs=54.0

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+. +++||.|+.+|+.||||+|||+.+...
T Consensus         4 ~~~~~~Alydy~a~----~~~ELsf~~Gd~i~Vl~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~~   64 (142)
T 2kbt_A            4 TFGTAKARYDFCAR----DRSELSLKEGDIIKILNKKGQQGWWRGEIYGRIGWFPSNYVEEDYSE   64 (142)
T ss_dssp             CCCEEEESSCCCCS----SSSBCCCCTTCEEEEEECCCSSSEEEEEETTEEEEEETTSEEESSCC
T ss_pred             cCeEEEECCccCCC----CCCcCCCCCCCEEEEEEecCCCCeEEEEECCeeEEechHHEEEcccc
Confidence            34578999999999    7889999999999999984 789999999999999999999998643

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.51  E-value=1e-14  Score=104.70  Aligned_cols=59  Identities=37%  Similarity=0.623  Sum_probs=54.0

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+++|+.||||+|||+.+...
T Consensus        34 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   92 (98)
T 1udl_A           34 VCQVIAMYDYAAN----NEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKMTTDS   92 (98)
T ss_dssp             SEEEEESSCCCCS----STTSCCCCTTCEEEECBCCSSSEEBCBSSSCBCCEETTSEEECCCC
T ss_pred             ceEEEECCCCCCC----CCCccCCcCCCEEEEEEecCCCEEEEEECCcEEEEehHHeEEcCCC
Confidence            4568999999999    7889999999999999998899999999999999999999987643

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.50  E-value=5.3e-14  Score=97.53  Aligned_cols=56  Identities=20%  Similarity=0.364  Sum_probs=50.0

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCC-CeEEEEE--CCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDK-NWYEGEH--NAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~-~Ww~g~~--~g~~G~~P~nyv~~~~  119 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+.++ +||.|+.  +|+.||||+|||+...
T Consensus        18 ~~~~Alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   76 (81)
T 1x6g_A           18 TQCITKCEHTRP----KPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERS   76 (81)
T ss_dssp             CEEEESSCBSSC----CTTCCCBCTTCEEEEEECCCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CEEEECCCCCcC----CCCCCCCCCCCEEEEEeccCCCCeEEEEeCCCCCEEEEehHHEEEcc
Confidence            358899999999    788999999999999998766 9999995  6999999999998753

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=2.8e-14  Score=101.63  Aligned_cols=58  Identities=28%  Similarity=0.454  Sum_probs=52.0

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe--cC--CCeEEEE--ECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ--VD--KNWYEGE--HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~--~~--~~Ww~g~--~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+  .+  ++||.|+  .+|+.|+||+|||+.+..
T Consensus        16 ~~~~~Alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~   79 (94)
T 2e5k_A           16 HETLQVIYPYTPQ----NDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADE   79 (94)
T ss_dssp             CEEEEECSCBCCS----SSSBCCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECCS
T ss_pred             CeEEEECCcCCCC----CCCCcCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEccc
Confidence            4568999999999    789999999999999987  34  8999999  799999999999998853

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.50  E-value=5.7e-14  Score=125.95  Aligned_cols=120  Identities=15%  Similarity=0.114  Sum_probs=92.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe-cCCCeEEEEEC-CeEEEeeCCcEEeecC----------CCC-CC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ-VDKNWYEGEHN-AMIGLFPFNYVEIIPY----------DKI-RT  125 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~~-g~~G~~P~nyv~~~~~----------~~~-~~  125 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+++ .+.+||.|+.. |+.|+||+|||+....          +|+ +.
T Consensus        11 ~~~~~aly~~~~~----~~~el~~~~gd~i~v~~~~~~~~ww~~~~~~g~~G~~P~~yv~~~~~~~~~~~~~~~~wyhg~   86 (450)
T 1k9a_A           11 GTECIAKYNFHGT----AEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGTKLSLMPWFHGK   86 (450)
T ss_dssp             TCEEEESSCBCCS----SSSBCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCCCCCCTTEESCTTBCTT
T ss_pred             CCEEEECCCcCcc----CCCcCCCCCCCEEEEeeccCCCCceEEEECCCceeeechhccccccccccccccccccccccC
Confidence            3468999999999    788999999999999998 67799999976 9999999999998643          232 11


Q ss_pred             Cc--------CCCCcCcEEEcccccCCCccccccccccceEEeccccc-ccc------cccchhhhhhccch
Q psy15850        126 AP--------KKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQY------RRPVRNEIKELISE  182 (225)
Q Consensus       126 ~~--------~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~------~f~~~~~l~e~~~~  182 (225)
                      ++        ..+..|.|+++.+....+.+.|++..+..++++..... .+|      .|.++.+|++++..
T Consensus        87 i~r~~ae~~L~~~~~G~FlvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~i~~~~~F~sl~eLv~~y~~  158 (450)
T 1k9a_A           87 ITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTT  158 (450)
T ss_dssp             CCHHHHHHHTCSCCTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHHHHHHH
T ss_pred             cCHHHhhhhhccCCCceEEEEecCCCCCceEEEEEeCCeeeEEEEEecCCceEeccccccccHHHHHhhhcc
Confidence            11        12356899999998888999999999888877654222 222      27788888887754

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=99.49  E-value=3.4e-14  Score=101.03  Aligned_cols=59  Identities=24%  Similarity=0.421  Sum_probs=52.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC----CCeEEEEECCe-EEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD----KNWYEGEHNAM-IGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~----~~Ww~g~~~g~-~G~~P~nyv~~~~~~  121 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+.+    .+||.|+++|. .||||+|||+.+...
T Consensus        17 ~~~~~alydy~a~----~~~eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~~~~~G~~P~~yv~~~~~~   80 (93)
T 1wxu_A           17 HVVARAEYDFVAV----SDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKR   80 (93)
T ss_dssp             BBCEEESSCBCCS----SSSBCCBCSSCBCEECCTTTSCSCSSCEEEESSSSSCEEECSTTEEECCCB
T ss_pred             CEEEEECccCCCC----CCCccCcCCCCEEEEEECCCCCCCCCcEEEEeCCcCEEEEehHHEEEcCCc
Confidence            4458999999999    78899999999999999877    59999998887 999999999988643

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=99.48  E-value=7.1e-14  Score=98.69  Aligned_cols=56  Identities=29%  Similarity=0.463  Sum_probs=50.8

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++    ..++|+|++||+|.|+.+ +++||.|+.  +|+.|+||+|||+.+..
T Consensus         4 ~~~~Alydy~~~----~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   61 (90)
T 3reb_B            4 IIVVALYDYVSW----SPDDLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVDS   61 (90)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEEEEEC-SSSEEEEEETTTCCEEEEEGGGEEEECC
T ss_pred             EEEEECCccCcC----CcCcCCCCCCCEEEEEEe-CCCEEEEEECCCCCEEEEehhheEECCC
Confidence            468999999999    788999999999999998 578999997  89999999999998864

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=99.48  E-value=3.5e-14  Score=99.55  Aligned_cols=54  Identities=24%  Similarity=0.409  Sum_probs=48.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~  117 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+ +++||.|+ .+|+.||||+|||+.
T Consensus        31 ~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~   85 (86)
T 2jxb_A           31 EVIVIAKWDYTAQ----QDQELDIKKNERLWLLDD-SKTWWRVRNAANRTGYVPSNYVER   85 (86)
T ss_dssp             CEEEEESSCCCCC----SSSBCCCCTTEEEEEEEC-CSSEEEEECTTSCEEEEEGGGBCC
T ss_pred             ceEEEECccCCCC----CCCEeccCCCCEEEEEec-CCCeEEEEECCCCEEEeehHHEEe
Confidence            3578999999999    788999999999999998 67999999 689999999999964

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=99.47  E-value=4.6e-14  Score=104.88  Aligned_cols=57  Identities=19%  Similarity=0.508  Sum_probs=51.3

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE---CCeEEEeeCCcEEeec
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYVEIIP  119 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~---~g~~G~~P~nyv~~~~  119 (225)
                      +..+++|+|||.++    ..+||+|++||+|.|+.++ ++||+|++   +|+.||||+|||+.+.
T Consensus        58 ~~~~~~Alydy~a~----~~~eLsf~~Gd~i~vl~~~-~gWw~g~~~~~~g~~G~fP~nyV~~~~  117 (119)
T 2rqr_A           58 KERHGVAIYNFQGS----GAPQLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHIKE  117 (119)
T ss_dssp             CCEEEEBCSCBCCC----STTBCCBCTTCEEEEEEEE-TTEEEEEESSCTTCEEEEEGGGBCCCC
T ss_pred             CceEEEEccccCCC----CCCcccCcCCCEEEEEEcC-CCEEEEEECCCCCCEEEeChhHEEEec
Confidence            45679999999999    7889999999999999986 59999998   8999999999998753

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=99.47  E-value=2.3e-15  Score=101.76  Aligned_cols=57  Identities=28%  Similarity=0.438  Sum_probs=51.7

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEE-EeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIG-LFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G-~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.| |||+|||+.+..
T Consensus         7 ~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~gG~~P~~yv~~~~~   64 (71)
T 1hsq_A            7 CAVKALFDYKAQ----REDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVN   64 (71)
T ss_dssp             SCCCCSSCCCCS----SSSSCCCCTTCCCBSCCCBTTTEECCBCSSSCSCCEETTTCCSCSC
T ss_pred             eEEEECCCCCcC----CCCccCCCCCCEEEEEEecCCCEEEEEECCeEEeEEChHHcEECCC
Confidence            457899999999    788999999999999999889999999988886 999999998754

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=99.47  E-value=4.3e-14  Score=99.95  Aligned_cols=58  Identities=24%  Similarity=0.371  Sum_probs=49.6

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe---------------cCCCeEEEEE--CCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ---------------VDKNWYEGEH--NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~---------------~~~~Ww~g~~--~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+               ++.+||.|+.  +|+.||||+|||+.+..
T Consensus        11 ~~~~~Alydy~a~----~~~ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~fP~nyVe~i~~   85 (90)
T 3o5z_A           11 GFQYRALYPFRRE----RPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLGP   85 (90)
T ss_dssp             EEEEEECSCBCCC----STTBCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEEEGGGEEEEEE
T ss_pred             CcEEEEeeeECCC----CCCccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEeehHHEEEecc
Confidence            4568999999999    789999999999999843               2238999986  69999999999998754

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.47  E-value=5.3e-14  Score=96.70  Aligned_cols=59  Identities=27%  Similarity=0.424  Sum_probs=46.6

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEE--ECCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGE--HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~--~~g~~G~~P~nyv~~~~  119 (225)
                      ..++++|+|.++... ..+||+|++||+|.|+.+. +.+||.|+  .+|+.|+||+|||+.+.
T Consensus        16 ~~~~a~~~~~~~~~~-~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~nyV~~~~   77 (78)
T 1k1z_A           16 EVFQEYYGIPPPPGA-FGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   77 (78)
T ss_dssp             EECSCBSSCSCCSSS-SCCCCCBCTTCEEEEEECCSSCSCEEEEETTTTEEEEECSTTEEESC
T ss_pred             EEEEECCCCCCCCCC-CCCccCCCCCCEEEEEEcCCCCCeEEEEECCCCCEEEEehHHeEECC
Confidence            344566666664111 2579999999999999985 88999999  58999999999999764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.47  E-value=1e-13  Score=125.89  Aligned_cols=120  Identities=16%  Similarity=0.099  Sum_probs=93.7

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEEECCeEEEeeCCcEEeecC----CCC-CCCc-----
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGEHNAMIGLFPFNYVEIIPY----DKI-RTAP-----  127 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~~~g~~G~~P~nyv~~~~~----~~~-~~~~-----  127 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+++. +.+||.|+.+|..|+||+|||+.+..    +|+ ..++     
T Consensus        43 ~~~~~alyd~~~~----~~~els~~~gd~~~v~~~~~~~~w~~~~~~~~~G~~P~~yv~~~~~le~~~wyhg~i~r~~ae  118 (495)
T 1opk_A           43 PNLFVALYDFVAS----GDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAE  118 (495)
T ss_dssp             -CEEEESSCBCCC----STTBCCBCTTCEEEEEEECTTSSEEEEECSSCEEEEEGGGEEESSSGGGSTTEEEECCHHHHH
T ss_pred             CcEEEEeCCcCCC----CCCCCCccCCCEEEEeecCCCCCceeeeecCCcceeccccccccccccchhhhccCCCHHHHH
Confidence            4568999999999    7889999999999999876 78999999999999999999998642    233 1111     


Q ss_pred             ---CCCCcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc------ccchhhhhhccch
Q psy15850        128 ---KKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR------RPVRNEIKELISE  182 (225)
Q Consensus       128 ---~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~  182 (225)
                         .....|.|+++.+....+.+.||++.+..|+++.... .+| ++      |.++.+|+.++..
T Consensus       119 ~ll~~~~~G~fLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~g~~~~~~~~~F~sl~eLv~~~~~  184 (495)
T 1opk_A          119 YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHST  184 (495)
T ss_dssp             HHGGGCCTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHHTT
T ss_pred             HHhhCCCCceEEEEeCCCCCCceEEEEeeCCeEEEEEEEecCCCceEeccCccchhHHHHhhhhcc
Confidence               2235799999999988999999999999998876532 222 22      6778888877654

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=99.46  E-value=1.3e-13  Score=100.64  Aligned_cols=57  Identities=28%  Similarity=0.485  Sum_probs=52.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~  119 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+.  +|+.||||+|||+.+.
T Consensus        27 ~~~~~al~dy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   85 (109)
T 2yt6_A           27 VTIFVALYDYEAR----TTEDLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPAD   85 (109)
T ss_dssp             CCEEEESSCCCCS----STTSCCCCTTCEEEEEECSCTTCEEEEESSSCCEEEECTTTEEESS
T ss_pred             CEEEEECccCCCC----CCCccCCCCCCEEEEEEccCCCcEEEEECCCCCEEEechHHcEECC
Confidence            3568999999999    7889999999999999998999999995  8999999999999874

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=99.46  E-value=4.8e-14  Score=104.14  Aligned_cols=56  Identities=30%  Similarity=0.560  Sum_probs=50.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEE-----ecCCCeEEEEE----------CCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRR-----QVDKNWYEGEH----------NAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~-----~~~~~Ww~g~~----------~g~~G~~P~nyv~~~  118 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.     ..+.+||.|+.          +|+.||||+|||+.+
T Consensus        44 ~~~~~Alydy~a~----~~dELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~~l  114 (115)
T 1bb9_A           44 MFKVQAQHDYTAT----DTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV  114 (115)
T ss_dssp             CEEEEESSCBCCS----STTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             ceEEEECCccCCC----CCCccCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHEEEC
Confidence            3568999999999    78899999999999999     78889999975          388999999999976

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=99.45  E-value=7.3e-14  Score=103.95  Aligned_cols=57  Identities=23%  Similarity=0.399  Sum_probs=51.8

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE---CCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~---~g~~G~~P~nyv~~~~~  120 (225)
                      .+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.   +|+.|+||+|||+.+..
T Consensus         4 ~~~~Alydy~a~----~~~ELsf~~Gd~i~vl~~~~~~Ww~g~~~~~~g~~G~~P~nyv~~~~~   63 (120)
T 2kym_A            4 LFAVTLYEFKAE----RDDELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIIDL   63 (120)
T ss_dssp             CEEEECSCBCCC----STTCCCBCTTCEEEEEEEETTTEEEEEESSSCSCCCCEEGGGEEEECS
T ss_pred             EEEEEcccCCCC----CCCccCCCCCCEEEEEEecCCCEEEEEECCCCCCEEEEchHHEEEccC
Confidence            468999999999    7889999999999999999999999985   57889999999999853

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=99.45  E-value=3.2e-14  Score=99.04  Aligned_cols=57  Identities=26%  Similarity=0.418  Sum_probs=49.2

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEe---------------cCCCeEEEEE--CCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ---------------VDKNWYEGEH--NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~---------------~~~~Ww~g~~--~g~~G~~P~nyv~~~~~  120 (225)
                      ..++|+|||.++    ..+||+|++||+|.|+.+               .+.+||.|+.  +|+.|+||+|||+.+..
T Consensus         6 ~~~~Alydy~~~----~~~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~yV~~~~~   79 (83)
T 3i5r_A            6 YQYRALYDYKKE----REEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGR   79 (83)
T ss_dssp             EEEEECSCBCCC----STTBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             cEEEEccccCCC----CCCccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehHHEEECCc
Confidence            458999999999    789999999999999964               3448999974  69999999999998753

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.43  E-value=3.6e-13  Score=120.82  Aligned_cols=119  Identities=18%  Similarity=0.216  Sum_probs=90.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeecC----CCC-CCCc----
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIPY----DKI-RTAP----  127 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~~----~~~-~~~~----  127 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+++ +++||.|+  .+|+.|+||+|||+.+..    +|+ ..++    
T Consensus         8 ~~~~~al~~~~~~----~~~el~~~~gd~~~v~~~-~~~W~~~~~~~~g~~G~~P~~yv~~~~~le~~~W~~g~i~r~~a   82 (454)
T 1qcf_A            8 RIIVVALYDYEAI----HHEDLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVDSLETEEWFFKGISRKDA   82 (454)
T ss_dssp             CCEEEESSCBCCC----STTBCCBCTTCEEEEEEC-CTTEEEEEETTTCCEEEEEGGGEEETTCGGGSTTEETTCCHHHH
T ss_pred             CeEEEECcccCCc----CCCcCcccCCCEEEEEec-CCCCeEEEECCCCceEEecchhcccccccccccccccccchhhh
Confidence            3568999999999    788999999999999988 47899999  689999999999997642    233 1111    


Q ss_pred             ------CCCCcCcEEEcccccCCCcccccccc-----ccceEEeccc--cccccc------ccchhhhhhccch
Q psy15850        128 ------KKLSEGQARAKFNFVAQTHLELSLVK-----ESPHKYVDSE--VTLQYR------RPVRNEIKELISE  182 (225)
Q Consensus       128 ------~~~~~~~~~a~~~~~~~~~~els~~~-----g~~v~~~~~~--~~~~~~------f~~~~~l~e~~~~  182 (225)
                            .....|.|+++.+....+.+.|++..     |..++++...  .+++|.      |.++.+|++++.+
T Consensus        83 e~~L~~~~~~~G~FLvR~s~~~~g~y~lsv~~~~~~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLv~~y~~  156 (454)
T 1qcf_A           83 ERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKK  156 (454)
T ss_dssp             HHHHHSTTCCTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHHHHHTS
T ss_pred             hhhhhcCCCCCceEEEEECcCCCCeEEEEEEecccCCCCceEEEEEEEcCCCcEEEeCccccCCHHHHHHHHHh
Confidence                  12367899999998888999999987     6677666542  122222      6778888887765

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=99.41  E-value=5.8e-15  Score=101.34  Aligned_cols=54  Identities=17%  Similarity=0.338  Sum_probs=49.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEe
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEI  117 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~  117 (225)
                      .+++|+|||.++    +.+||+|++||+|.|+.+.+.+||.|+ .+|+.||||+|||+.
T Consensus        21 ~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~   75 (77)
T 1awj_A           21 TLVIALYDYQTN----DPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE   75 (77)
T ss_dssp             SCCCCCCCBCCC----CTTSCCBCSSSCCSCCCTTSSSBCCCCCSSSCCCCCBSTTCCC
T ss_pred             eEEEECccCCCC----CcCCcCCCCCCEEEEEEecCCCCEEEEECCCCEEEEehHHEEE
Confidence            457899999999    788999999999999999888999999 489999999999975

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=99.40  E-value=4.4e-13  Score=90.05  Aligned_cols=58  Identities=22%  Similarity=0.403  Sum_probs=44.8

Q ss_pred             EEEeecccCCCC--CCCCccccccCCCeEEEEEe-cCCCeEEEE--ECCeEEEeeCCcEEeec
Q psy15850         62 LQELHDISSRRH--TDNFTELSFKKGDIIFVRRQ-VDKNWYEGE--HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        62 ~~al~d~~~~~~--~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~--~~g~~G~~P~nyv~~~~  119 (225)
                      ++|++.|.+..+  ..+.+||+|++||+|.|+.+ .+.+||.|+  .+|+.|+||+|||+.+.
T Consensus         7 ~~~~~~y~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~   69 (70)
T 1gcq_C            7 MEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   69 (70)
T ss_dssp             EEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             ceEEEEEEecCCCCCCCCCcCCcCCCCEEEEEeCCCCCCCeEEEeCCCCCEeEeehHHeEECC
Confidence            345555554421  11455999999999999998 678999995  68999999999999764

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.40  E-value=4e-13  Score=106.08  Aligned_cols=56  Identities=23%  Similarity=0.488  Sum_probs=51.7

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEe
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEI  117 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~  117 (225)
                      ....++|+|||.++    ..+||+|++||+|.|+++.+++||.|+ .+|+.||||+|||+.
T Consensus       117 ~~~~~~alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~nyv~~  173 (174)
T 3qwx_X          117 IIEVVVGTFKFTGE----RETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI  173 (174)
T ss_dssp             CSEEEEESSCBCCS----STTBCCBCTTCEEEEEECCSSSEEEEECTTCCEEEEEGGGEEE
T ss_pred             cccEEEEecCcccC----CCCccccccCCEEEEEEccCCCeEEEEECCCCEEEEChHHEEe
Confidence            34579999999999    788999999999999999999999999 699999999999975

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.40  E-value=2.3e-13  Score=110.47  Aligned_cols=56  Identities=30%  Similarity=0.560  Sum_probs=50.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEE-----ecCCCeEEEEE----------CCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRR-----QVDKNWYEGEH----------NAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~-----~~~~~Ww~g~~----------~g~~G~~P~nyv~~~  118 (225)
                      ..+++|||||.++    ..+||+|++||+|.|+.     ..+.+||.|+.          +|+.||||+|||+.+
T Consensus       142 ~~~~rALYdY~a~----~~dELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe~l  212 (213)
T 1mv3_A          142 MFKVQAQHDYTAT----DTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV  212 (213)
T ss_dssp             CEEEEESSCBCCC----STTCCCBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred             ceEEEECCCcCCC----CCCcCCcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence            4568999999999    78899999999999999     77889999995          489999999999876

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.40  E-value=4.4e-13  Score=109.14  Aligned_cols=59  Identities=36%  Similarity=0.702  Sum_probs=54.5

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.+..
T Consensus       157 ~~~~~~al~~y~~~----~~~eL~~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~~~~  215 (217)
T 1gri_A          157 QPTYVQALFDFDPQ----EDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNR  215 (217)
T ss_dssp             CCCEEEESSCCCCS----STTBCCCCTTCEEEEEECCSSSEEEEECSSCEEEEEGGGEEEECC
T ss_pred             CceEEEecCCccCC----CCCcCCCCCCCEEEEEEeCCCCeEEEEECCeEEEEeHHHeEECCC
Confidence            45679999999999    788999999999999999999999999999999999999998753

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.36  E-value=1.3e-12  Score=104.96  Aligned_cols=57  Identities=16%  Similarity=0.292  Sum_probs=53.3

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..++|+|||.++    +.+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.+..
T Consensus        82 ~~~~al~dy~a~----~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~  138 (193)
T 1ng2_A           82 EPYVAIKAYTAV----EGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQ  138 (193)
T ss_dssp             EEEEESSCBCCC----STTBCCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEETTS
T ss_pred             eeeeeccccCCC----CCCcccccCCCEEEEEEecCCCeEEEEECCCEEEEehHHeEECCC
Confidence            468899999999    788999999999999999889999999999999999999999864

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=99.35  E-value=1.3e-12  Score=110.27  Aligned_cols=57  Identities=37%  Similarity=0.648  Sum_probs=53.1

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..++|+|||.++    +.+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+..
T Consensus         3 ~~~~a~~~~~~~----~~~el~~~~gd~i~v~~~~~~~w~~~~~~g~~G~~P~~~v~~~~~   59 (283)
T 3jv3_A            3 CQVIGMYDYTAQ----NDDELAFSKGQIINVLNKEDPDWWKGEVSGQVGLFPSNYVKLTTD   59 (283)
T ss_dssp             EEEEESSCBCCS----STTBCCBCTTCEEEEEECCSTTEEEEEETTEEEEEEGGGEEEGGG
T ss_pred             eEEEEccccCCC----CCCcCCCCCCCEEEEEecCCCCEEEEEECCCCCcCCCccccccCc
Confidence            358899999999    788999999999999999999999999999999999999998754

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=99.31  E-value=3e-12  Score=102.07  Aligned_cols=57  Identities=19%  Similarity=0.493  Sum_probs=51.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE---CCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~---~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+++.+ +||.|++   +|+.|+||+|||+.+..
T Consensus        17 ~~~~~Alydf~~~----~~~eLs~~~Gd~i~v~~~~~-~W~~g~~~~~~g~~G~fP~nyV~~~~~   76 (184)
T 3a98_A           17 ERHGVAIYNFQGS----GAPQLSLQIGDVVRIQETCG-DWYRGYLIKHKMLQGIFPKSFIHIKEV   76 (184)
T ss_dssp             CCEEEESSCBCCS----STTBCCBCTTCEEEEEEEET-TEEEEEETTEEEEEEEEEGGGEEEECC
T ss_pred             ceEEEEeeeeCCC----CCCCCCcCCCCEEEEEecCC-CEEEEEEecCCCceEEECcceEEEecc
Confidence            4579999999999    78899999999999999876 5999997   78999999999998754

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.30  E-value=1.1e-12  Score=112.48  Aligned_cols=58  Identities=24%  Similarity=0.397  Sum_probs=52.9

Q ss_pred             ceEEEEeeccc--CCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDIS--SRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~--~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.  +.    +.+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.+..
T Consensus       237 ~~~~~al~d~~~~a~----~~~eL~~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~  296 (304)
T 2eyz_A          237 PIYARVIQKRVPNAY----DKTALALEVGELVKVTKINVSGQWEGECNGKRGHFPFTHVRLLDQ  296 (304)
T ss_dssp             CCCSCCSSCBCCCTT----CSSCCCBCTTSCCEEEEECTTSCEEEEETTEEEECCCTTSCCCSS
T ss_pred             CEEEEEeeeecCCCC----CCCeecccCCCEEEEEEecCCCeEEEEECCceEEechHHEEECCC
Confidence            45688999999  65    678999999999999999999999999999999999999998864

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.27  E-value=9e-13  Score=108.63  Aligned_cols=59  Identities=31%  Similarity=0.644  Sum_probs=53.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~~  121 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|+ .+|+.||||+|||+.+...
T Consensus       136 ~~~~~al~dy~~~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~  195 (230)
T 2dvj_A          136 AEYVRALFDFNGN----DEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPA  195 (230)
T ss_dssp             CCCCBCCSCCCCS----SSSSCCCCSSCBCCCCBCSCSSEEEEECTTSCEEEEEGGGSCCCCSS
T ss_pred             ceeEEEeeeecCC----CCCCccCcCCCEEEEEEccCCCcEEEEeCCCCEEEEehHHeEEcCCC
Confidence            4468999999999    788999999999999999999999999 8999999999999988643

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=99.25  E-value=1e-11  Score=112.04  Aligned_cols=59  Identities=27%  Similarity=0.431  Sum_probs=54.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ..+++|+|||.+.    +.+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+...
T Consensus        30 ~~~~~al~~~~~~----~~~eL~~~~gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~~~~~   88 (466)
T 2pz1_A           30 VVCAEALWDHVTM----DDQELGFKAGDVIEVMDATNREWWWGRVADGEGWFPASFVRLRVNQ   88 (466)
T ss_dssp             CEEEEESSCBCCC----CTTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEECSCC
T ss_pred             ccEEEEccccCCC----CCCcCCCCCCCEEEEEEecCCCEEEEEECCcEEEEehhHeeeccCc
Confidence            4568999999999    7889999999999999999999999999999999999999987543

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=98.82  E-value=1.7e-12  Score=111.16  Aligned_cols=61  Identities=30%  Similarity=0.403  Sum_probs=52.9

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...+++|+|||.++..  +.+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.+..
T Consensus       236 ~~~~~~alydy~~~~~--~~~eLs~~~Gd~i~v~~~~~~gWw~g~~~g~~G~fP~~yv~~~~~  296 (303)
T 2lqn_A          236 GPVFAKAIQKRVPCAY--DKTALALEVGDIVKVTRMNINGQWEGEVNGRKGLFPFTHVKIFDP  296 (303)
Confidence            3457899999986510  366999999999999999999999999999999999999998854

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=99.17  E-value=3.1e-11  Score=110.30  Aligned_cols=57  Identities=21%  Similarity=0.197  Sum_probs=52.4

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~  119 (225)
                      ...++|+|||.|+    +.+||+|++||+|.|+.+.++|||.|+  .+|+.|+||+|||+.+.
T Consensus       442 ~~~~~aly~y~a~----~~dELs~~~GD~i~v~~~~~~gW~~G~~~~~g~~G~fPsnyV~~~~  500 (526)
T 2de0_X          442 AHNQIAIYAHQPR----TADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKI  500 (526)
T ss_dssp             CCEEEECSCBCCS----STTBCCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             ccceEEeecCCCC----CCCcCCcCCCCEEEEccccCCCeeEEEeCCCCCEEEECchheeEcc
Confidence            3468999999999    789999999999999999999999999  68999999999999864

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=99.17  E-value=3e-11  Score=79.10  Aligned_cols=60  Identities=13%  Similarity=0.216  Sum_probs=49.6

Q ss_pred             CeEEEeeCCcEEeecCCCCCCCcCCCCcCcEEEcccccCCCccccccccccceEEecccccccccccch
Q psy15850        105 AMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR  173 (225)
Q Consensus       105 g~~G~~P~nyv~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~  173 (225)
                      |+.||||++||+.+...        .....++|+|+|.+...++|+|++||+|.++.. ..++||.+.+
T Consensus         2 g~~G~~P~~yv~~~~~~--------~~~~~~~alydy~a~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~   61 (62)
T 1g2b_A            2 DRQGFVPAAYVKKLDSG--------TGKELVLALYDYQEKSPREVTMKKGDILTLLNS-TNKDWWKVEV   61 (62)
T ss_dssp             CEEEEEEGGGEEECCCC--------SSSCEEEECSCBCCSSTTBCCBCTTCEEEEEEC-CSSSEEEEEE
T ss_pred             CCccccccceEeecCCC--------CCceEEEEeeeECCCCCCccCCCCCCEEEEEEe-cCCCEEEEEe
Confidence            68999999999976532        233568999999999999999999999999987 5677886543

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.16  E-value=1.3e-11  Score=88.37  Aligned_cols=78  Identities=19%  Similarity=0.233  Sum_probs=61.4

Q ss_pred             CCeEEEeeCCcEEeecCCCCCCCcCCCCcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        104 NAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       104 ~g~~G~~P~nyv~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      +|+.||||++||+.+........+.......++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         6 ~g~~G~fP~~~v~~~~~~~~~~~p~~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   83 (98)
T 1udl_A            6 SGQKGWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSKGQLINVMNK-DDPDWWQGEINGVTGLFPS   83 (98)
T ss_dssp             SSCCSSCCCCCCCCCSCCCCCCCSCCCCSEEEEESSCCCCSSTTSCCCCTTCEEEECBC-CSSSEEBCBSSSCBCCEET
T ss_pred             CCCEeEEEhhhEEEcCCcccccCCCCCCceEEEECCCCCCCCCCccCCcCCCEEEEEEe-cCCCEEEEEECCcEEEEeh
Confidence            57899999999998875544444444556678999999999999999999999999987 5577887666665555554

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=99.14  E-value=2.9e-11  Score=82.91  Aligned_cols=51  Identities=22%  Similarity=0.292  Sum_probs=45.2

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEec--CCCeEEEEE----CCeEEEeeCCcE
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV--DKNWYEGEH----NAMIGLFPFNYV  115 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~--~~~Ww~g~~----~g~~G~~P~nyv  115 (225)
                      .+.|+|||.|+    +..||+|++||++.|++..  +++||.++.    .+++|+||+|||
T Consensus        19 ~~valydF~Ar----~~~ELS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl   75 (82)
T 1u3o_A           19 LTVVLQDFSAA----HSSELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTL   75 (82)
T ss_dssp             EEECSSCBCCC----STTCCCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGS
T ss_pred             EEEEEeeecCC----CCCeeeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEE
Confidence            47899999999    7889999999999999876  479999995    237899999999

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.11  E-value=7e-12  Score=107.55  Aligned_cols=60  Identities=22%  Similarity=0.364  Sum_probs=0.0

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|+|||.+...  +.+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.++.
T Consensus       247 ~~~a~alyd~~~~~~--~~~ELs~~~Gd~i~v~~~~~~~ww~g~~~g~~G~fP~~yv~~~~~  306 (308)
T 3qwy_A          247 PAKAKVTFDRVPNAY--DPTQLRVKKGQTVLVTQKMSNGMYKAELDGQIGSVPHTYLRFTAV  306 (308)
T ss_dssp             --------------------------------------------------------------
T ss_pred             ccccccccccccccC--CcccceeCCCCEEEEEEEcCCCcEEEEECCeeEEechHHeEEecC
Confidence            456899999965410  358999999999999999889999999999999999999998753

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=99.05  E-value=3.2e-10  Score=74.15  Aligned_cols=42  Identities=29%  Similarity=0.556  Sum_probs=38.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN  104 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~  104 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+.+||.|+++
T Consensus        21 ~~~~~alydy~a~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~n   62 (62)
T 1g2b_A           21 KELVLALYDYQEK----SPREVTMKKGDILTLLNSTNKDWWKVEVN   62 (62)
T ss_dssp             SCEEEECSCBCCS----STTBCCBCTTCEEEEEECCSSSEEEEEEC
T ss_pred             ceEEEEeeeECCC----CCCccCCCCCCEEEEEEecCCCEEEEEeC
Confidence            4568999999999    78899999999999999999999999864

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=99.01  E-value=7.3e-11  Score=100.64  Aligned_cols=53  Identities=26%  Similarity=0.480  Sum_probs=47.0

Q ss_pred             EEEEeecccCCCCCCCCc-----cccccCCCeEEEEEecCCCeEEEEECC------eEEEeeCCcEEe
Q psy15850         61 YLQELHDISSRRHTDNFT-----ELSFKKGDIIFVRRQVDKNWYEGEHNA------MIGLFPFNYVEI  117 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~-----eLs~~~Gdii~v~~~~~~~Ww~g~~~g------~~G~~P~nyv~~  117 (225)
                      +++|+|||.++    ..+     +|+|++||++.|+++.+++||.|+..+      +.|+||+||+..
T Consensus         3 ~vrAlydy~~~----~~~~~p~~eLsf~~GDil~V~~~~d~~WW~a~~~~~~~~~~~~G~iPsny~~e   66 (295)
T 1kjw_A            3 YIRALFDYDKT----KDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVE   66 (295)
T ss_dssp             EEEESSCBCHH----HHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHH
T ss_pred             EEEEeeccCCC----CCCCCCCcCCcCCCCCEEEEEEeCCCCeEEEEECCCCCccCceeEeecHHHHH
Confidence            58999999998    555     999999999999999999999999643      789999999854

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=98.98  E-value=5.2e-11  Score=108.13  Aligned_cols=56  Identities=34%  Similarity=0.631  Sum_probs=0.0

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEEEC-CeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGEHN-AMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~~~-g~~G~~P~nyv~~~  118 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+.+. +.+||.|++. |+.||||+|||+.+
T Consensus       428 ~~~~~alydy~~~----~~~eLsf~~Gd~i~vl~~~~~~~Ww~g~~~~g~~G~~P~nyv~~i  485 (486)
T 3haj_A          428 EVRVRALYDYEGQ----EHDELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPANYVEAI  485 (486)
T ss_dssp             --------------------------------------------------------------
T ss_pred             CeEEEEccccCCC----CCCcCccCCCCEEEEEEecCCCCeeEEEeCCCCEEEEeHHHceeC
Confidence            3458999999999    7889999999999999876 4599999987 99999999999875

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=98.86  E-value=9.9e-10  Score=102.90  Aligned_cols=59  Identities=32%  Similarity=0.579  Sum_probs=50.1

Q ss_pred             cceEEEEeeccc---CCCCCCCCccccccCCCeEEEEEe-----cCCCeEEEE--ECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDIS---SRRHTDNFTELSFKKGDIIFVRRQ-----VDKNWYEGE--HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~---~~~~~~~~~eLs~~~Gdii~v~~~-----~~~~Ww~g~--~~g~~G~~P~nyv~~~~~  120 (225)
                      +..|++|+|||.   +.    ++++|+|++||+|.++..     .++|||.|+  .+|+.|+||++||..++.
T Consensus       572 rs~~~~Al~d~~~~~~~----~~~~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~~g~~G~fP~~~V~~lpt  640 (655)
T 3pvl_A          572 RSKYVVALQDNPNPAGE----ESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTDCVYVMPT  640 (655)
T ss_dssp             HCCEEEESSCCCC---------CCBCCCCTTCEEEESSCCHHHHHHSSEEEEEETTTCCEEEEEGGGEEECCC
T ss_pred             cchhhhHHhhcccCCCC----CCCcccccCCCEEEEccccCcccCCCCeEEEEeCCCCceEEeEhhhEEECCC
Confidence            346899999998   44    678999999999999887     468999999  689999999999999864

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.86  E-value=1.2e-09  Score=77.49  Aligned_cols=58  Identities=14%  Similarity=0.042  Sum_probs=47.2

Q ss_pred             ceEEEEeecc--cCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDI--SSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~--~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|+|  ...    +..+|+|++|+++.|+...+.+||.++ ..|+.|+||.+||+.++.
T Consensus        39 l~~~~a~~~f~~~k~----g~~DLpfkkGE~LeVI~~~e~~wwLcRNs~GkyGyVP~~yl~~~d~   99 (102)
T 1ri9_A           39 LYSTKVTTSITSKKW----GTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDG   99 (102)
T ss_dssp             SSCCBCCTTSCSSCC----CTTBCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGSCC---
T ss_pred             EEEEEEeeccccccC----CcccCCcCCCCEEEEEEeCCCCEEEEECCCCCCCceeHHHhccccc
Confidence            3446788888  333    577999999999999999999999999 589999999999987654

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=98.84  E-value=4.1e-09  Score=90.68  Aligned_cols=57  Identities=19%  Similarity=0.358  Sum_probs=47.1

Q ss_pred             cceEEEEeecccCCCCCC---CCccccccCCCeEEEEEecCCCeEEEEE---CCeEEEeeCCc
Q psy15850         58 RRKYLQELHDISSRRHTD---NFTELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNY  114 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~---~~~eLs~~~Gdii~v~~~~~~~Ww~g~~---~g~~G~~P~ny  114 (225)
                      ...+++|+|||.+..+.+   ...+|+|++||++.|+++.+++||.|+.   +|..|+||+++
T Consensus        37 ~~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~WWqar~~~~~g~~GlIPS~~   99 (337)
T 4dey_A           37 VAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPV   99 (337)
T ss_dssp             CCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHH
T ss_pred             ccEEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCeEEEEECCCCCCccEecCHH
Confidence            345899999999984221   1126999999999999999999999996   57899999987

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.69  E-value=4.8e-08  Score=67.68  Aligned_cols=56  Identities=14%  Similarity=0.181  Sum_probs=41.4

Q ss_pred             eecccCCCCCCCCccccccCCCeEEEEEecCC----CeEEEEECCeEEEeeCCcEEeecC
Q psy15850         65 LHDISSRRHTDNFTELSFKKGDIIFVRRQVDK----NWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        65 l~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~----~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ||+|.+.......-||++++||+|.|+.+.|+    .||....+|..||||++|++++..
T Consensus        19 LY~~t~~~~~tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~Vdtgg~~GyvPs~yLe~~~~   78 (92)
T 1ug1_A           19 LFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNP   78 (92)
T ss_dssp             EEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEECSSSEEEEEGGGEEECCC
T ss_pred             eEEeccCcCCCCceeeeecCCCEEEEEecCCCCCCCcceEEECCCcEEeeEhhhceEccc
Confidence            44444443222567999999999999987643    444466699999999999999864

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=98.62  E-value=4.6e-08  Score=79.72  Aligned_cols=56  Identities=27%  Similarity=0.471  Sum_probs=50.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCC---eEEEEECCeEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKN---WYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~---Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      ..+.++|+|.+.    ...+|.|++|++|.|+.+.+.+   ||.++.+|+.|+||.+||+.++
T Consensus       171 ~~~~al~d~~~~----~~~eLa~~~G~~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~~~  229 (239)
T 1ycs_B          171 GVIYALWDYEPQ----NDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP  229 (239)
T ss_dssp             GEEEESSCBCCS----STTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECCC
T ss_pred             ceEEEEeccCCC----CCCcccccCCCEEEEEEecCCCCCCEEEEEECCcEEEeehHHeeECC
Confidence            457899999999    7889999999999999877665   9999999999999999999874

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=98.56  E-value=4.3e-08  Score=86.57  Aligned_cols=55  Identities=16%  Similarity=0.165  Sum_probs=47.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe---cCCCeEEEEECC------eEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ---VDKNWYEGEHNA------MIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~---~~~~Ww~g~~~g------~~G~~P~nyv~~  117 (225)
                      ..+++|+|||.+.    +..+|+|++||++.|++.   .+.+||.++..+      ..|+||++|+..
T Consensus       106 ~~~vral~dy~~~----~~~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~~~~e  169 (391)
T 3tsz_A          106 SFYIRTHFEYEKE----SPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAE  169 (391)
T ss_dssp             CEEEEECSCBCCS----STTBCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEECHHHHH
T ss_pred             ccccccccccCCC----CCCcceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEecCHHHHH
Confidence            4578999999998    778999999999999998   578999999422      489999999864

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=98.56  E-value=3.3e-08  Score=69.42  Aligned_cols=56  Identities=27%  Similarity=0.331  Sum_probs=47.1

Q ss_pred             ccceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC--CCeEEEE-ECCeEEEeeCCcEEe
Q psy15850         57 RRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD--KNWYEGE-HNAMIGLFPFNYVEI  117 (225)
Q Consensus        57 ~~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~--~~Ww~g~-~~g~~G~~P~nyv~~  117 (225)
                      .....++|+++. ..    +..+|+|++|+++.|+.+.+  .+||.++ ..|+.|+||.+||+.
T Consensus        26 ~vl~~a~a~~~~-k~----g~~dLp~~~GE~LeII~~~e~p~g~Wl~RN~~G~~GyVp~~~v~v   84 (96)
T 2gtj_A           26 QVIHLAKACCDV-KG----GKNELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEI   84 (96)
T ss_dssp             CCCEEEEESSCE-EC----TTSCCEECTTCCEEEEECTTCSSSCCEEECTTCCBCCCCGGGEEE
T ss_pred             eeEEEEEEeecC-CC----CcccCCcCCCCEEEEEEccCCCCCeEEEECCCCCCCccchhhEEE
Confidence            345568899983 33    57899999999999999876  5799999 589999999999986

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}

Probab=98.54  E-value=5.7e-08  Score=82.93  Aligned_cols=54  Identities=15%  Similarity=0.266  Sum_probs=43.6

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCC---------eEEEEEC------CeEEEeeCCcEEe
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKN---------WYEGEHN------AMIGLFPFNYVEI  117 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~---------Ww~g~~~------g~~G~~P~nyv~~  117 (225)
                      .|+||+|||.++    .+.+|+|++||++.|++..+++         ||.+..-      +..|++|++|+..
T Consensus         5 fyVRalfdy~~~----~~~eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~ae   73 (308)
T 3kfv_A            5 FYIRTHFELEPS----PPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAE   73 (308)
T ss_dssp             EEEEECSCBCCC----SSSBCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHH
T ss_pred             EEEEEecCcCCC----CcccCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHH
Confidence            368999999998    7889999999999999987665         9999842      2689999998754

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=98.51  E-value=6.3e-08  Score=91.78  Aligned_cols=55  Identities=25%  Similarity=0.435  Sum_probs=46.9

Q ss_pred             ceEEEEeecccCCCCCCCCcc-----ccccCCCeEEEEEecCCCeEEEEEC------CeEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTE-----LSFKKGDIIFVRRQVDKNWYEGEHN------AMIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~e-----Ls~~~Gdii~v~~~~~~~Ww~g~~~------g~~G~~P~nyv~~  117 (225)
                      ..+++|+|||++.    ..++     |+|++||++.|+++.+.+||.++..      +..|+||+||+..
T Consensus       427 ~~~vrAl~dy~~~----~d~~~p~~~LsF~~GDil~v~~~~~~~WW~a~~~~~~~~~~~~G~iPs~~~~e  492 (721)
T 2xkx_A          427 GFYIRALFDYDKT----KDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVE  492 (721)
T ss_pred             ceeEEEeeccCcC----CCCCCccccccccCCCEEEEeecCCCCeEEEEECCCCCccCccceeecHHHHH
Confidence            4578999999998    4555     9999999999999999999999953      3569999999843

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}

Probab=98.46  E-value=1.6e-07  Score=84.58  Aligned_cols=55  Identities=18%  Similarity=0.197  Sum_probs=47.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEe---cCCCeEEEEE---CC---eEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ---VDKNWYEGEH---NA---MIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~---~~~~Ww~g~~---~g---~~G~~P~nyv~~  117 (225)
                      ..+++|+|||.+.    ...+|+|++||++.|++.   .+.+||.++.   ++   ..|+||++|+..
T Consensus        98 s~yVralfdy~~~----~~~~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~~~~e  161 (468)
T 3shw_A           98 SFYIRTHFEYEKE----SPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAE  161 (468)
T ss_dssp             CEEEEECSCBCCS----STTBCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEEEECHHHHH
T ss_pred             ccccccccCcCCC----CCCCceEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccceecCHHHHH
Confidence            4578999999998    678999999999999998   6789999984   33   689999999854

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*

Probab=98.43  E-value=1.7e-07  Score=79.54  Aligned_cols=55  Identities=29%  Similarity=0.617  Sum_probs=38.5

Q ss_pred             ceEEEEeecccCCCCCC-CCccccccCCCeEEEEEecCCCeEEEEE------CCeEEEeeCC
Q psy15850         59 RKYLQELHDISSRRHTD-NFTELSFKKGDIIFVRRQVDKNWYEGEH------NAMIGLFPFN  113 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~-~~~eLs~~~Gdii~v~~~~~~~Ww~g~~------~g~~G~~P~n  113 (225)
                      ..|+||+|||++..+.. ....|+|++||++.|+++.+++||.++.      .+..|++|+.
T Consensus         5 s~yvRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~~~~d~~wWqA~~v~~~~~~~~~GlIPS~   66 (292)
T 3tvt_A            5 SLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSK   66 (292)
T ss_dssp             CCEEEECSCBCC---------CCCBCTTCEEEEEECCSSSEEEECCCCC--------EEECH
T ss_pred             eEEEEEeccCCCCCCCCCCCCcCCcCCCCEEEEeecCCCCeEEEEEeCCCCCccceeEEeCh
Confidence            35799999999984321 1126999999999999999999999983      1247999984

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=98.32  E-value=8.3e-07  Score=75.04  Aligned_cols=54  Identities=17%  Similarity=0.142  Sum_probs=45.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~  119 (225)
                      +..+.|+|||.+.       ++++.+|+.+.+++..+..||.++ .+|..|++|++|+...+
T Consensus       198 ~~~v~al~dy~~~-------e~~~~kge~~~l~~~s~~~wW~v~~~~G~~g~vPs~~~~ip~  252 (283)
T 3pe0_A          198 RLPLLAVCDYKQV-------EVTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPSVCFLVPP  252 (283)
T ss_dssp             CEEEEECSCEECS-------SCEECTTCEEEEEEECSTTEEEEECC---EEEEEGGGEECCS
T ss_pred             CceEEeecCccCC-------cccccCCCEEEEeeCCCCCceEEEcCCCCEeeccceEEeeCC
Confidence            4579999999887       899999999999999888999999 67889999999997643

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=98.30  E-value=6.8e-07  Score=71.52  Aligned_cols=56  Identities=34%  Similarity=0.612  Sum_probs=51.6

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ...++|+|+|.++    ...+|+|++||++.|....+.+||.+...|+.|++|.+|+...
T Consensus        14 ~~~~~al~d~~~~----~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~   69 (222)
T 3ehr_A           14 VKVFRALYTFEPR----TPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQ   69 (222)
T ss_dssp             CEEEEESSCCCCS----STTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHH
T ss_pred             ceEEEEeCCcCCC----CCCcccccCCCEEEEeccccchhHhcccCCcceeechhhcccc
Confidence            4678999999999    7889999999999999999999999999999999999998754

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=98.15  E-value=1.3e-06  Score=59.61  Aligned_cols=53  Identities=9%  Similarity=-0.044  Sum_probs=42.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.....+|||.+.++.-..++..+
T Consensus         9 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~fP~~   61 (80)
T 2i0n_A            9 FAKYARALKDYNVSDTSLLPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVD   61 (80)
T ss_dssp             CCCEEEESSCBCCCSSSSCCBCSSEEEEEEEESSSSSEEEEEETTEEEEEEGG
T ss_pred             CCeEEEECCCCCcCCCCCcCCCCCCEEEEEEecCCCCEEEEEECCcEEEechH
Confidence            44578999999999999999999999999998555558877666666666553

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=98.08  E-value=1.3e-06  Score=54.92  Aligned_cols=50  Identities=16%  Similarity=0.160  Sum_probs=40.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      +.++|+|+|.+..+++|+|++||+|.++......+||....+.-..+++.
T Consensus         1 g~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~g~~G~~P~   50 (54)
T 2a28_A            1 GAMEAIYAYEAQGDDEISIDPGDIITVIRGDDGSGWTYGECDGLKGLFPT   50 (54)
T ss_dssp             CEEEBCSCBCCCSTTBCCBCTTCEEEEEECCCSSSEEEEEETTEEEEEEG
T ss_pred             CEEEECccCCcCCCCCccCCCCCEEEEEEecCCCCEEEEEECCeEEEeeH
Confidence            45899999999999999999999999998854468887666666555554

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=98.01  E-value=3e-06  Score=55.65  Aligned_cols=49  Identities=12%  Similarity=0.070  Sum_probs=38.4

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ..++||.+.  .+.-..+++.
T Consensus         7 ~~~~Alydy~a~~~~ELs~~~Gd~i~v~~~-~~~gWw~g~~~~~g~~G~~P~   57 (65)
T 2lj0_A            7 FSYQALYSYIPQNDDELELRDGDIVDVMEK-CDDGWFVGTSRRTKQFGTFPG   57 (65)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEE-CTTSEEEEEETTTCCEEEEET
T ss_pred             EEEEEceeECCCCcCCcCCCCCCEEEEeEe-CCCCEEEEEECCCCCEEEEeh
Confidence            468999999999999999999999999987 556777543  3455555544

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=98.01  E-value=3e-06  Score=54.77  Aligned_cols=50  Identities=8%  Similarity=0.171  Sum_probs=39.2

Q ss_pred             CcEEEcccccCCCccc-cccccccceEEecccccccccccch-hhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLE-LSLVKESPHKYVDSEVTLQYRRPVR-NEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~e-ls~~~g~~v~~~~~~~~~~~~f~~~-~~l~e~~~~~  183 (225)
                      ..++|+|+|.++.+++ |+|++||+|.+++. ..++||.+.. +.-..+++.+
T Consensus         4 ~~~rAlydy~~~~~~e~Ls~~~Gd~i~v~~~-~~~~Ww~g~~~~G~~G~fP~n   55 (60)
T 2lx7_A            4 ARCRTLYPFSGERHGQGLRFAAGELITLLQV-PDGGWWEGEKEDGLRGWFPAS   55 (60)
T ss_dssp             CEEEESCCCCSCCCSSCCCCCTTCEEEBSCC-CTTSCEEEECTTSCEEEECGG
T ss_pred             CEEEECcccCCCCCCCCccCCCCCEEEEeEe-cCCCeEEEEeCCCCEEEEcHH
Confidence            4689999999998887 99999999999987 5667886543 4455666553

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.00  E-value=3.6e-06  Score=57.54  Aligned_cols=53  Identities=17%  Similarity=0.167  Sum_probs=43.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-cccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.... ..+||...++.-..+++.+
T Consensus        16 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~   69 (81)
T 1x43_A           16 NNRKARVLYDYDAANSTELSLLADEVITVFSVVGMDSDWLMGERGNQKGKVPIT   69 (81)
T ss_dssp             CCEEEEESSCCCCSSTTBCCCCTTCEEEEECCTTCCTTEEEEEETTEEEEEEGG
T ss_pred             CCeEEEEcccCCCCCCCcCCCCCCCEEEEEEcCCCCCCcEEEEECCCEEEEehH
Confidence            4457999999999999999999999999998753 6788876666666666553

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=98.00  E-value=3.1e-06  Score=56.68  Aligned_cols=51  Identities=8%  Similarity=0.144  Sum_probs=41.6

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+.-..+++.+
T Consensus        13 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~~   63 (73)
T 3c0c_A           13 QPSCKALYDFEPENDGELGFREGDLITLTNQ-IDENWYEGMLHGQSGFFPLS   63 (73)
T ss_dssp             SCEEEESSCBCCSSTTBCCBCTTCEEEEEEE-CSSSEEEEEETTEEEEEEGG
T ss_pred             CeEEEECccCCCCCCCCccCcCCCEEEEEEe-cCCCEEEEEECCCEEEeChH
Confidence            4568999999999999999999999999987 56788876666666665543

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=97.99  E-value=3.2e-06  Score=55.39  Aligned_cols=49  Identities=24%  Similarity=0.236  Sum_probs=40.9

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+.-..+++.+
T Consensus         3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~fP~~   51 (65)
T 2nwm_A            3 AARLKFDFQAQSPKELTLQKGDIVYIHKE-VDKNWLEGEHHGRLGIFPAN   51 (65)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEEC-CTTTCEEEEETTEEEEECGG
T ss_pred             EEEEeeeECCCCcCccCCcCCCEEEEEEe-cCCCEEEEEECCcEEEEehh
Confidence            47899999999999999999999999987 56788877676666666654

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=97.99  E-value=2.9e-06  Score=54.92  Aligned_cols=50  Identities=10%  Similarity=0.075  Sum_probs=41.2

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..+++|+|++||+|.++......+||.+..+.-..+++.+
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~   52 (62)
T 2j6f_A            3 DYIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDN   52 (62)
T ss_dssp             CEEECSCBCCSSTTBCCBCTTCEEEEEEECSSTTEEEEEETTEEEEEEGG
T ss_pred             EEEECccCCcCCcCCcCCcCCCEEEEEEecCCCCEEEEEECCcEEEechH
Confidence            47899999999999999999999999987456788877666666666553

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.98  E-value=3.4e-06  Score=56.31  Aligned_cols=53  Identities=21%  Similarity=0.173  Sum_probs=42.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++......+||...++.-..+++.+
T Consensus         9 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~   61 (72)
T 1ugv_A            9 PFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPEN   61 (72)
T ss_dssp             SCCCEEESSCBCCCSSSBCCBCTTCEEBSCCBCSSTTEEEEESSSCEEEEEGG
T ss_pred             CccEEEEccccCCcCCCEeCCcCCCEEEEEEecCCCCeEEEEECCcEEEecHH
Confidence            34579999999999999999999999999985567788876666666665543

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.97  E-value=2.1e-06  Score=58.31  Aligned_cols=49  Identities=14%  Similarity=0.149  Sum_probs=40.0

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus        18 ~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~-~~~gWw~g~~~g~~G~~P~   66 (78)
T 2ed0_A           18 EKVVAIYDYTKDKEDELSFQEGAIIYVIKK-NDDGWYEGVMNGVTGLFPG   66 (78)
T ss_dssp             EEEEECSCBCCSSTTBCCBCSSCEEEEEEE-CSSSEEEEEETTEEEEEET
T ss_pred             EEEEECccCCccCcCcccccCCCEEEEEEe-CCCCEEEEEECCcEEEeCh
Confidence            358999999999999999999999999987 4677886666665555554

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.97  E-value=3.3e-06  Score=54.62  Aligned_cols=50  Identities=12%  Similarity=0.112  Sum_probs=41.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||.+.++.-..+++.+
T Consensus         6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   55 (62)
T 1k4u_S            6 SQVEALFSYEATQPEDLEFQEGDIILVLSK-VNEEWLEGESKGKVGIFPKV   55 (62)
T ss_dssp             EEEECCSCBCCCSSSBCCBCSSCEEEEEEE-SSSSCEEEECSSCEEEECGG
T ss_pred             eEEEECCCCCcCCCCCccCCCCCEEEEEEe-CCCCEEEEEECCcEEEEeHH
Confidence            468999999999999999999999999987 56788876666666666653

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=97.97  E-value=3.1e-06  Score=54.37  Aligned_cols=51  Identities=24%  Similarity=0.295  Sum_probs=41.4

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.+
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   56 (60)
T 2gnc_A            6 PEFAIAKFDYVGRSARELSFKKGASLLLYHR-ASEDWWEGRHNGIDGLVPHQ   56 (60)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEEE-EETTEEEEEETTEEEEEEGG
T ss_pred             CEEEEECCCCCcCCcCCcCCCCCCEEEEEEe-cCCCEEEEEECCeEEEEeHh
Confidence            3468999999999999999999999999987 55788876666666665543

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=97.96  E-value=4.3e-06  Score=53.47  Aligned_cols=50  Identities=22%  Similarity=0.167  Sum_probs=40.4

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         4 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   53 (59)
T 2g6f_X            4 GSVVRAKFNFQQTNEDELSFSKGDVIHVTRV-EEGGWWEGTHNGRTGWFPS   53 (59)
T ss_dssp             CCEEEESSCBCCSSTTBCCBCTTCEEEEEEE-CTTSEEEEEETTEEEEEEG
T ss_pred             CcEEEECceeCCCCcCCcCCCCCCEEEEEEe-cCCCEEEEEECCcEEEEeH
Confidence            3468999999999999999999999999986 4578887666655555554

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=97.96  E-value=3.9e-06  Score=55.48  Aligned_cols=50  Identities=8%  Similarity=0.123  Sum_probs=41.4

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ..++||.+.++.-..+++.+
T Consensus         4 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   53 (68)
T 2ew3_A            4 PCCRGLYDFEPENQGELGFKEGDIITLTNQ-IDENWYEGMIHGESGFFPIN   53 (68)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEEE-SSSSEEEEEETTEEEEEEGG
T ss_pred             CEEEEeeeECCCCCCccCCCCCCEEEEEEe-cCCCEEEEEECCcEEEeeHH
Confidence            458999999999999999999999999986 56788876666666666554

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=97.95  E-value=3.9e-06  Score=53.50  Aligned_cols=48  Identities=19%  Similarity=0.190  Sum_probs=38.5

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchh--hhhhccch
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN--EIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~--~l~e~~~~  182 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ..++||.+..+  .-..+++.
T Consensus         2 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~~g~~G~~P~   51 (58)
T 1jo8_A            2 WATAEYDYDAAEDNELTFVENDKIINIEF-VDDDWWLGELEKDGSKGLFPS   51 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTTCCEEEEEG
T ss_pred             EEEECceECCCCCCCcccCCCCEEEEEEe-cCCCcEEEEECCCCCEEEech
Confidence            47899999999999999999999999987 56788865554  55555544

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=97.95  E-value=3.8e-06  Score=53.54  Aligned_cols=49  Identities=16%  Similarity=0.165  Sum_probs=40.1

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+.-..+++.+
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   51 (58)
T 2bz8_A            3 EAIVEFDYQAQHDDELTISVGEIITNIRK-EDGGWWEGQINGRRGLFPDN   51 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEEC-CTTTEEEEEETTEEEEEEGG
T ss_pred             EEEECcccCCCCcCEeeECCCCEEEEEEe-CCCCEEEEEECCeEEEEehH
Confidence            47899999999999999999999999987 56788876666655555543

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=97.95  E-value=7.8e-08  Score=83.39  Aligned_cols=57  Identities=16%  Similarity=0.327  Sum_probs=43.6

Q ss_pred             EEeecccCCCCCCCCccccc--cCCCeEEEEEecCCCeEEEEECCeE---EEeeCC-cEEeec
Q psy15850         63 QELHDISSRRHTDNFTELSF--KKGDIIFVRRQVDKNWYEGEHNAMI---GLFPFN-YVEIIP  119 (225)
Q Consensus        63 ~al~d~~~~~~~~~~~eLs~--~~Gdii~v~~~~~~~Ww~g~~~g~~---G~~P~n-yv~~~~  119 (225)
                      +|+|+|.++.-..+..+|+|  ++||+|.|+.+.++|||.|+++|+.   |+||.+ ||+.++
T Consensus       270 ~a~yd~~~~~~~~~e~eL~~~~~~GD~I~v~~~~d~gWw~Ge~~g~~G~~glfP~~~~v~~~~  332 (341)
T 2dyb_A          270 KDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPWKLHITQKD  332 (341)
T ss_dssp             HHHHHHHHHHHTCSCEEEEEECSSSCEEECCSHHHHHHHHHHHTTSCCBTTBCSSCEEEEECC
T ss_pred             hhhhhhhhhhcCCCcccccCCCCCCCEEEEeeecCCCEeEEEECCCCCCCceecceeEEEecC
Confidence            47888887310015667777  7999999999999999999976654   599998 777765

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=97.95  E-value=2.1e-06  Score=56.31  Aligned_cols=50  Identities=18%  Similarity=0.181  Sum_probs=41.1

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||.+.++.-..+++.+
T Consensus         2 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~-~~~gWw~g~~~g~~G~fP~~   51 (65)
T 2fei_A            2 RQCKVLFEYIPQNEDELELKVGDIIDINEE-VEEGWWSGTLNNKLGLFPSN   51 (65)
T ss_dssp             CEEECSSCCCCCSTTBCCCCTTCEEECCCC-SSSSEEEEESSSCEEEEETT
T ss_pred             eEEEECccCCcCCcCccCCCCCCEEEEEEe-cCCCEEEEEECCcEEEecHH
Confidence            358899999999999999999999999986 66788876666666666553

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=97.94  E-value=5.8e-06  Score=55.25  Aligned_cols=53  Identities=13%  Similarity=0.250  Sum_probs=42.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccc-ccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++... ...+||.+.++.-..+++.+
T Consensus         8 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~   61 (73)
T 2k9g_A            8 SKDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDN   61 (73)
T ss_dssp             SCEEEEECSCBCCSSTTBCCBCTTCEEEEEECCSSSTTEEEEEETTEEEEEEGG
T ss_pred             CccEEEECccCCCCCCCeeeECCCCEEEEEECCCCCCCEEEEEECCeEEEEchH
Confidence            445689999999999999999999999999874 36788876666666666553

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=97.93  E-value=7e-06  Score=53.41  Aligned_cols=51  Identities=16%  Similarity=0.100  Sum_probs=41.0

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         8 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   58 (65)
T 3ulr_B            8 LGITAIALYDYQAAGDDEISFDPDDIITNIEM-IDDGWWRGVCKGRYGLFPA   58 (65)
T ss_dssp             CCSCEEECSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEG
T ss_pred             CceEEEEEeeECCCCcCEeeEecCCEEEEEEe-cCCCEEEEEECCcEEEEeh
Confidence            34568999999999999999999999999987 4678887666665555554

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=97.93  E-value=4.1e-06  Score=55.59  Aligned_cols=51  Identities=12%  Similarity=0.237  Sum_probs=41.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEeccc-ccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++... ...+||.+..+.-..+++.+
T Consensus         3 ~~~~Alydy~a~~~~eLs~~~Gd~i~vl~~~~~~~gWw~g~~~g~~G~~P~~   54 (69)
T 2ydl_A            3 DYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDN   54 (69)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEESCCSSTTEEEEEETTEEEEEEGG
T ss_pred             cEEEEcccCCCCCCCccccCCCCEEEEEEcCCCCCCEEEEEECCcEEEecHH
Confidence            3589999999999999999999999999874 36788876666666666653

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=97.93  E-value=6.7e-06  Score=55.05  Aligned_cols=51  Identities=16%  Similarity=0.180  Sum_probs=41.3

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+.-..+++.
T Consensus        16 ~~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~-~~~gWw~g~~~g~~G~fP~   66 (72)
T 2l0a_A           16 EARKVRAIYDFEAAEDNELTFKAGEIITVLDD-SDPNWWKGETHQGIGLFPS   66 (72)
T ss_dssp             CCEEEEESSCBCCSSTTBCCBCTTCEEEEEEE-EETTEEEEECSSCEEECTT
T ss_pred             CCeEEEECCccCCCCCCccCCCCCCEEEEEEe-cCCCEEEEEECCCEEEech
Confidence            44568999999999999999999999999986 5678887666655555554

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=97.93  E-value=4.3e-06  Score=55.10  Aligned_cols=42  Identities=10%  Similarity=0.062  Sum_probs=35.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNE  175 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~  175 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ..++||.+.++.
T Consensus         8 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~~   49 (68)
T 1tg0_A            8 FKVVAQFPYKSDYEDDLNFEKDQEIIVTSV-EDAEWYFGEYQD   49 (68)
T ss_dssp             EEEEESSCBCCSCTTBCCBCTTCEEEEEEE-CSSSEEEEEEEC
T ss_pred             EEEEECeeECcCCcCCCCCCCCCEEEEEEe-cCCCeEEEEECC
Confidence            468999999999999999999999999976 667888655543

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=5e-06  Score=54.81  Aligned_cols=50  Identities=20%  Similarity=0.176  Sum_probs=41.1

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   56 (68)
T 2dmo_A            7 GEAHRVLFGFVPETKEELQVMPGNIVFVLKK-GNDNWATVMFNGQKGLVPC   56 (68)
T ss_dssp             SEEEEECSSCCCCSSSSCCCCTTCEEEECEE-CSSSCEEEEETTEEEEECS
T ss_pred             CCEEEECcCCCcCCcCCCCCCCCCEEEEEEe-CCCCEEEEEeCCCEEEeeh
Confidence            3568999999999999999999999999987 5578887666666666554

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=97.91  E-value=5.9e-06  Score=53.04  Aligned_cols=50  Identities=14%  Similarity=0.190  Sum_probs=40.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+.-..+++.+
T Consensus         5 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~~   54 (60)
T 1w70_A            5 MRAEALFDFTGNSKLELNFKAGDVIFLLSR-INKDWLEGTVRGATGIFPLS   54 (60)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEE-CSSSEEEEEETTEEEEEEGG
T ss_pred             cEEEECccCCcCCCCCccCCCCCEEEEEEe-CCCCeEEEEECCCEEEechH
Confidence            458999999999999999999999999987 46788876666655555543

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=97.90  E-value=5.7e-06  Score=53.05  Aligned_cols=51  Identities=12%  Similarity=0.113  Sum_probs=41.2

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccc-cccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.... ..+||....+.-..+++.+
T Consensus         4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~   55 (60)
T 1oot_A            4 PKAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPAN   55 (60)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGG
T ss_pred             cEEEECccCCcCCcCEeeEcCCCEEEEEEeCCCCCCeEEEEECCEEEEEeHH
Confidence            46899999999999999999999999998742 6788876666666665543

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=97.90  E-value=5.3e-06  Score=52.83  Aligned_cols=49  Identities=20%  Similarity=0.165  Sum_probs=40.1

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+.-..+++.+
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   51 (58)
T 1uti_A            3 WARALYDFEALEEDELGFRSGEVVEVLDS-SNPSWWTGRLHNKLGLFPAN   51 (58)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             EEEECccCCCCCcCCCCCCCCCEEEEEEE-CCCCEEEEEECCeEEEeeHH
Confidence            47899999999999999999999999987 56788876666655555543

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=97.90  E-value=7.1e-06  Score=55.31  Aligned_cols=51  Identities=8%  Similarity=0.047  Sum_probs=40.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhh---hhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNE---IKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~---l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||...++.   -..+++.
T Consensus         9 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~~~~g~~G~~P~   62 (76)
T 2ed1_A            9 KVRRVKTIYDCQADNDDELTFIEGEVIIVTGE-EDQEWWIGHIEGQPERKGVFPV   62 (76)
T ss_dssp             CCEEEEESSCCCCSSSSBCCCCSSCEEEESSC-CSSSEEEEEETTCTTCEEEEEG
T ss_pred             CCeEEEECccCCCCCcCCcCcCCCCEEEEEEe-cCCCEEEEEECCCCCCEEEEeh
Confidence            34568999999999999999999999999986 667888766544   4555544

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=97.89  E-value=6.7e-06  Score=53.43  Aligned_cols=52  Identities=12%  Similarity=0.167  Sum_probs=41.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccc-ccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++... ...+||.+..+.-..+++.+
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~   58 (64)
T 2jte_A            6 KEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDN   58 (64)
T ss_dssp             SEEEEESSCBCCSSSSBCCBCTTCEEEEEESCSSSTTEEEEEETTEEEEEEGG
T ss_pred             CEEEEECccCCccCCCccCCCCCCEEEEEECCCCCCCEEEEEECCeEEEEeHH
Confidence            34689999999999999999999999999874 35788876666666666543

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.89  E-value=6.8e-06  Score=54.81  Aligned_cols=50  Identities=28%  Similarity=0.302  Sum_probs=40.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+...++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         9 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   58 (72)
T 2dl8_A            9 PIEAIAKFDYVGRTARELSFKKGASLLLYQR-ASDDWWEGRHNGIDGLIPH   58 (72)
T ss_dssp             CEEEEESSCBCCSSSSBCCBCTTCEEEEEEE-EETTEEEEEETTEEEEECS
T ss_pred             CEEEEECccCCcCCCCEeccCCCCEEEEEee-cCCCEEEEEECCEEEEEch
Confidence            3468999999999999999999999999987 5678887666665555554

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=97.89  E-value=6.6e-06  Score=52.33  Aligned_cols=50  Identities=14%  Similarity=0.175  Sum_probs=40.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+.-..+++.+
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   52 (58)
T 1sem_A            3 KFVQALFDFNPQESGELAFKRGDVITLINK-DDPNWWEGQLNNRRGIFPSN   52 (58)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEC-SSSSEEEEEETTEEEEEEGG
T ss_pred             eEEEECcCCCCCCCCCcCCCCCCEEEEEEe-cCCCEEEEEECCcEEEechH
Confidence            358999999999999999999999999987 56788876666655555543

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=97.89  E-value=7.4e-06  Score=52.53  Aligned_cols=49  Identities=16%  Similarity=0.116  Sum_probs=40.2

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   54 (60)
T 2xmf_A            6 PQCKALYAYDAQDTDELSFNANDIIDIIKE-DPSGWWTGRLRGKQGLFPN   54 (60)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEE-CTTSEEEEEETTEEEEEEG
T ss_pred             cEEEECccCCcCCcCCcCCCCCCEEEEEEe-cCCCEEEEEECCEEEEEcH
Confidence            468999999999999999999999999987 4678887665655555554

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=97.88  E-value=5.9e-06  Score=54.58  Aligned_cols=50  Identities=16%  Similarity=0.135  Sum_probs=40.8

Q ss_pred             cEEEcccccCCCccccccccccceEEecccc--cccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..+++|+|++||+|.++....  ..+||.+..+.-..+++.+
T Consensus         5 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~~   56 (69)
T 1wyx_A            5 LAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIVPGN   56 (69)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEETTGGGCTTEEEEEETTEEEEEEGG
T ss_pred             EEEECccCCcCCCCccCCcCCCEEEEeECCCCCCCCcEEEEECCcEEEechh
Confidence            4789999999999999999999999998853  6788876666666665543

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=97.88  E-value=5.7e-06  Score=53.01  Aligned_cols=50  Identities=18%  Similarity=0.131  Sum_probs=39.2

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchh-hhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN-EIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~-~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++......+||....+ .-..+++.
T Consensus         4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~~g~~G~~P~   54 (60)
T 2x3w_D            4 VRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPA   54 (60)
T ss_dssp             CEEEECSCBCCSSSSBCCBCTTCEEEECSCCCSSSEEEEECSSCCEEEEEG
T ss_pred             CEEEECcccCccCCCcccCCCCCEEEEEEccCCCCceEEEeCCCCEEEecH
Confidence            458999999999999999999999999987545588865554 44455444

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=97.88  E-value=4.9e-06  Score=55.84  Aligned_cols=52  Identities=23%  Similarity=0.279  Sum_probs=41.7

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++....+.+||...++.-..+++.+
T Consensus         9 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~g~~G~~P~~   60 (74)
T 1gbq_A            9 SMEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKN   60 (74)
T ss_dssp             -CEEEESSCBCCSSTTBCCBCTTCEEECCBCSSCSSEEEEEETTEEEEEEGG
T ss_pred             CeEEEECccCCCCCCCeeeEcCCCEEEEeEecCCCCEEEEEECCCEEEEehH
Confidence            3458999999999999999999999999987546688876666666666554

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.88  E-value=6.6e-06  Score=54.48  Aligned_cols=52  Identities=12%  Similarity=0.227  Sum_probs=41.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccc-ccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++... ...+||...++.-..+++.+
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~~g~~G~~P~~   59 (70)
T 2da9_A            7 GDYCKVIFPYEAQNDDELTIKEGDIVTLINKDCIDVGWWEGELNGRRGVFPDN   59 (70)
T ss_dssp             SEEEEECSCCCCSSTTBCCCCTTEEEEEEECCCSSTTEEEEECSSCEEEEEGG
T ss_pred             CcEEEECcCCCCCCcCEeeEcCCCEEEEEECCCCCCCeEEEEECCcEEEechH
Confidence            35689999999999999999999999999874 36788876666655555543

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=97.87  E-value=5.6e-06  Score=56.50  Aligned_cols=52  Identities=13%  Similarity=0.202  Sum_probs=42.5

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ..++||.+.++....+++.+
T Consensus        17 ~~~~~~Alydy~a~~~~eLsf~~Gd~I~Vl~~-~~~gWw~g~~~g~~G~fP~n   68 (79)
T 1z9q_A           17 AAPRAEALFDFTGNSKLELNFKAGDVIFLLSR-INKDWLEGTVRGATGIFPLS   68 (79)
T ss_dssp             SCCCEEESSCCCCSSTTBCCCCTTCCBCCCEE-SSSSEEEEEETTEEEEEEGG
T ss_pred             CceEEEEcCccCCCCCCcccccCCCEEEEeEe-cCCCEEEEEECCeEEEecHH
Confidence            34568999999999999999999999999987 56788876666666666553

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=97.87  E-value=8.6e-06  Score=53.44  Aligned_cols=51  Identities=12%  Similarity=0.104  Sum_probs=39.9

Q ss_pred             cCcEEEcccccCCCccc-cccccccceEEecccccccccccc--hhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLE-LSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~e-ls~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+.+ |+|++||+|.++.....++||.+.  ++.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~e~Lsf~~Gd~i~v~~~~~~~gW~~g~~~~~g~~G~fP~   60 (67)
T 3rnj_A            7 RMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPF   60 (67)
T ss_dssp             CCEEEESSCBCCCSCTTBCCBCTTCEEEECSSSCBTTEEEEEETTTCCEEEEEG
T ss_pred             CeEEEEccccCCCCCCCCccCCCCCEEEEeeccCCCCCEEEEECCCCCEEEEEH
Confidence            34689999999988777 999999999999765677888755  5555555554

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=97.87  E-value=6.5e-06  Score=52.34  Aligned_cols=49  Identities=16%  Similarity=0.103  Sum_probs=40.0

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~   52 (58)
T 2drm_A            4 IQVKALYDYDAQTGDELTFKEGDTIIVHQK-DPAGWWEGELNGKRGWVPA   52 (58)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEEC-CTTSEEEEEETTEEEEEEG
T ss_pred             cEEEECccCCCCCcCCcCCCCCCEEEEEEe-cCCCEEEEEECCcEEEEeH
Confidence            458999999999999999999999999987 5678887665665555554

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.87  E-value=1e-05  Score=54.88  Aligned_cols=53  Identities=17%  Similarity=0.141  Sum_probs=42.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc---cccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV---TLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~---~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++....   ..+||....+.-..+++.+
T Consensus        12 ~~~~~~Alydy~~~~~~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~~g~~G~~P~~   67 (79)
T 1uhc_A           12 GNQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSN   67 (79)
T ss_dssp             SSCCEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGG
T ss_pred             CCeEEEECccCCCCCCCccCCCCCCEEEEEECCCCCCCCCeEEEEeCCCEEEEchH
Confidence            3456899999999999999999999999998743   3788876666655665553

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=97.86  E-value=8.7e-06  Score=54.53  Aligned_cols=50  Identities=16%  Similarity=0.090  Sum_probs=40.5

Q ss_pred             cCcEEEcccccCC--CccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQ--THLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~--~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      .+.++|+|+|.+.  .+++|+|++||+|.++.. ...+||.+.++.-..+++.
T Consensus         9 ~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~-~~~gWw~g~~~g~~G~fP~   60 (73)
T 2ebp_A            9 CGRARVHTDFTPSPYDTDSLKLKKGDIIDIISK-PPMGTWMGLLNNKVGTFKF   60 (73)
T ss_dssp             SEEEEECSCBCCCTTCCSBCCBCSSCEEEEEEC-CSSSCEEEECSSCEEEECS
T ss_pred             ceEEEEeeccCCCCCCCCccCCCCCCEEEEEEe-CCCCeEEEEECCCEEEEeH
Confidence            3568999999975  899999999999999988 6778887666665555554

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=97.86  E-value=6.3e-06  Score=52.43  Aligned_cols=49  Identities=8%  Similarity=0.188  Sum_probs=38.9

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccch
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~  182 (225)
                      .++|+|+|.+..+++|+|++||+|.++......+||....  +.-..+++.
T Consensus         3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~~~g~~G~~P~   53 (58)
T 1zuu_A            3 ENKVLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPT   53 (58)
T ss_dssp             CCEECSCBCCCSTTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEG
T ss_pred             EEEEeeeECCcCCCcccCCCCCEEEEeEcCCCCCCEEEEECCCCCEEEEEH
Confidence            4789999999999999999999999998744467886554  555555554

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=97.86  E-value=6.7e-06  Score=52.36  Aligned_cols=50  Identities=12%  Similarity=0.183  Sum_probs=40.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.+
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   52 (58)
T 1zx6_A            3 EYVEALYQFDPQQDGDLGLKPGDKVQLLEK-LSPEWYKGSCNGRTGIFPAN   52 (58)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEEEE-CSSSEEEEEETTEEEEEEGG
T ss_pred             eEEEECceECCCCCCCccCCCCCEEEEEEe-cCCCEEEEEECCcEEEeeHH
Confidence            357899999999999999999999999987 56788876666666665543

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=97.85  E-value=9.4e-06  Score=53.35  Aligned_cols=50  Identities=14%  Similarity=-0.108  Sum_probs=40.9

Q ss_pred             CcEEEcccccCC--CccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQ--THLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~--~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+.  ...+|+|++||+|.++.. ...+||.+.++.-..+++.+
T Consensus         7 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~-~~~gWw~g~~~g~~G~fP~~   58 (67)
T 2eyx_A            7 IYARVIQKRVPNAYDKTALALEVGELVKVTKI-NVSGQWEGECNGKRGHFPFT   58 (67)
T ss_dssp             CBEEECCCBCCCTTCSSBCCBCSSEEEEEEEE-CTTSEEEEEETTEEEEEEGG
T ss_pred             EEEEEeEEECCCCCCCCccccCCCCEEEEEEe-cCCCEEEEEECCCEEEEehH
Confidence            468999999998  889999999999999987 56788877766666666553

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=97.85  E-value=7.7e-06  Score=57.09  Aligned_cols=53  Identities=11%  Similarity=0.070  Sum_probs=42.3

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccc----ccccccccch-hhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSE----VTLQYRRPVR-NEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~----~~~~~~f~~~-~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++...    ...+||.+.. +.-..+++.+
T Consensus        28 ~~~~~~Alydy~a~~~~ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~~g~~G~fP~n   85 (89)
T 2rf0_A           28 AGPVWTAVFDYEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSN   85 (89)
T ss_dssp             CCCEEEECSCBCCSSTTBCCBCTTCEEEEEECCHHHHSSTTEEEEECTTCCEEEEEGG
T ss_pred             CCcEEEECCccCCCCCCccccCCCCEEEEEeccCCcccCCCEEEEEECCCCEEEEcHH
Confidence            446789999999999999999999999999975    3678886555 6655565543

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=97.85  E-value=7.7e-06  Score=52.32  Aligned_cols=50  Identities=12%  Similarity=0.197  Sum_probs=39.8

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++......+||....  +.-..+++.
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~   54 (60)
T 2v1q_A            3 ERGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPA   54 (60)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEG
T ss_pred             cEEEEeeeECCCCCCCccCCCCCEEEEEeCCCCCCCEEEEECCCCCEEEEEH
Confidence            45899999999999999999999999998744677886554  555555554

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=97.85  E-value=7.3e-06  Score=52.96  Aligned_cols=50  Identities=16%  Similarity=0.197  Sum_probs=40.5

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.+
T Consensus         6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   55 (62)
T 1uj0_A            6 RRVRALYDFEAVEDNELTFKHGELITVLDD-SDANWWQGENHRGTGLFPSN   55 (62)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             eEEEECccCCCCCcCCcCCCCCCEEEEEEe-CCCCEEEEEECCCEEEechh
Confidence            458999999999999999999999999986 56788876655555565543

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=97.85  E-value=7.8e-06  Score=54.21  Aligned_cols=52  Identities=12%  Similarity=0.206  Sum_probs=41.6

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++......+||.+..  +.-..+++.+
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~   59 (71)
T 2jt4_A            6 KKRGIVQYDFMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQ   59 (71)
T ss_dssp             CEEEEECSCBCCSSTTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGG
T ss_pred             CCEEEEcccCCCCCCCcccCCCCCEEEEEECCCCCCCEEEEECCCCCeEEechH
Confidence            456899999999999999999999999998744778886554  5655665553

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=97.85  E-value=9.2e-06  Score=52.27  Aligned_cols=49  Identities=20%  Similarity=0.217  Sum_probs=39.1

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhh-ccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKE-LISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e-~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-.. +++.
T Consensus         4 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~gG~~P~   53 (61)
T 1y0m_A            4 SAVKALFDYKAQREDELTFTKSAIIQNVEK-QDGGWWRGDYGGKKQLWFPS   53 (61)
T ss_dssp             CCEEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEEG
T ss_pred             CEEEECcCCCcCCCCCcCCcCCCEEEEEEe-cCCCEEEEEECCeEEEEECh
Confidence            458999999999999999999999999987 566888665554444 4444

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=97.85  E-value=9.1e-06  Score=52.48  Aligned_cols=50  Identities=20%  Similarity=0.196  Sum_probs=39.5

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||.+.  .+.-..+++.+
T Consensus         4 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~~~g~~G~fP~~   55 (62)
T 2fpe_A            4 QTHRAIFRFVPRHEDELELEVDDPLLVELQ-AEDYWYEAYNMRTGARGVFPAY   55 (62)
T ss_dssp             CCEEECSCBCCSSTTBCCBCTTCEEEEEEE-CTTSEEEEEETTTCCEEEEEGG
T ss_pred             CEEEECccCCccCcCcCcCCCCCEEEEEEe-cCCCEEEEEECCCCCEEEechH
Confidence            458999999999999999999999999876 567788654  55555555543

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.85  E-value=6.3e-06  Score=55.49  Aligned_cols=50  Identities=8%  Similarity=-0.045  Sum_probs=40.7

Q ss_pred             CcEEEcccccCCC-------ccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQT-------HLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~-------~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+..       +.+|+|++||+|.++......+||.+.++.-..+++.
T Consensus         8 ~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~fP~   64 (75)
T 2ege_A            8 KIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPA   64 (75)
T ss_dssp             EEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESCCCTTCEEEEESSSCEEEEET
T ss_pred             cEEEECCCCCCCccccCCCCCCcceECCCCEEEEeEccCCCCEEEEEECCcEEEECh
Confidence            4689999999999       9999999999999997546788887666665555554

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.85  E-value=7.3e-06  Score=54.77  Aligned_cols=51  Identities=16%  Similarity=0.107  Sum_probs=41.3

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccc--ccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSE--VTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~--~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++...  ...+||...++.-..+++.
T Consensus         8 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~   60 (73)
T 2dl7_A            8 VCFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPS   60 (73)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEECCCSSSSSCEEEEETTEEEEECS
T ss_pred             CEEEEECccCCcCCCCcCCCCCCCEEEEEECCCCCCCCcEEEEECCCEEEECh
Confidence            34689999999999999999999999999874  4678887666665555554

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=97.84  E-value=9.5e-06  Score=52.38  Aligned_cols=51  Identities=14%  Similarity=0.133  Sum_probs=40.4

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++|++|.++......+||....+.-..+++.
T Consensus         5 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~~~~~g~~G~~P~   55 (63)
T 3eg3_A            5 PNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPS   55 (63)
T ss_dssp             TTEEEESSCBCCCSSSBCCBCTTCEEEEEEECTTSSEEEEEETTEEEEEEG
T ss_pred             CEEEEEcceECCCCCCccCCCCCCEEEEEEeCCCCCeEEEEECCCeEEEeh
Confidence            346899999999999999999999999998655677886555555555554

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.84  E-value=8.9e-06  Score=53.60  Aligned_cols=50  Identities=10%  Similarity=0.129  Sum_probs=40.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   56 (68)
T 2dl4_A            7 GNTYVALYKFVPQENEDLEMRPGDIITLLED-SNEDWWKGKIQDRIGFFPA   56 (68)
T ss_dssp             CCEEEESSCCCCSSTTBCCCCTTCEEEEEEC-CCSSEEEEECSSCEEEEET
T ss_pred             CCEEEEeeeECCCCcCCcCCCCCCEEEEEEe-CCCCEEEEEECCcEEEEeh
Confidence            3568999999999999999999999999986 5678886666655555544

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=97.84  E-value=8.8e-06  Score=53.38  Aligned_cols=51  Identities=10%  Similarity=0.081  Sum_probs=40.0

Q ss_pred             cCcEEEcccccC-CCccccccccccceEEecccccccccccchh--hhhhccch
Q psy15850        132 EGQARAKFNFVA-QTHLELSLVKESPHKYVDSEVTLQYRRPVRN--EIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~-~~~~els~~~g~~v~~~~~~~~~~~~f~~~~--~l~e~~~~  182 (225)
                      ...++|+|+|.+ ..+++|+|++||+|.++..+...+||.+..+  .-..+++.
T Consensus         6 ~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~   59 (67)
T 2kxc_A            6 KQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPS   59 (67)
T ss_dssp             CCEEEESSCBCCSSCSSBCCBCTTCEEEESSSSCBTTEEEEEESSSCCEEEEEG
T ss_pred             CEEEEEeecCCCCCCCCCCcCCCCCEEEEeECCCCCCcEEEEECCCCCEEEEeh
Confidence            346899999996 8999999999999999986467788865554  45555554

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=97.84  E-value=6.8e-06  Score=54.57  Aligned_cols=52  Identities=15%  Similarity=0.214  Sum_probs=41.2

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++......+||.+. .+.-..+++.+
T Consensus        11 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~   63 (71)
T 1csk_A           11 GTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPAN   63 (71)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEEECSSTTEEEEECTTSCEEEEETT
T ss_pred             CCEEEEceeECcCCCCcCCCCCCCEEEEeECCCCCCCEEEEeCCCCEEEEehH
Confidence            34689999999999999999999999999844667888655 55555665553

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=97.84  E-value=8.3e-06  Score=53.68  Aligned_cols=50  Identities=12%  Similarity=0.110  Sum_probs=40.9

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   56 (68)
T 2djq_A            7 GPRAKALCNYRGKNPGDLKFNKGDVILLRRQ-LDENWYQGEINGVSGIFPA   56 (68)
T ss_dssp             CCEEEECSCCCSCCTTCCCCCTTCEEEEEEC-CCSSEEEEEETTEEEEEES
T ss_pred             ceEEEECCCCCCCCcCCccCCCCCEEEEEEe-cCCCEEEEEECCcEEEeeh
Confidence            4568999999999999999999999999987 5678887666665555554

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=97.84  E-value=9.4e-06  Score=56.98  Aligned_cols=52  Identities=17%  Similarity=0.205  Sum_probs=43.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||.+.++.-..+++.+
T Consensus        17 ~~~~~~Alydy~a~~~~eLsf~~Gd~i~V~~~-~~~gWw~g~~~g~~G~fPsn   68 (92)
T 2o2o_A           17 RRRRCQVAFSYLPQNDDELELKVGDIIEVVGE-VEEGWWEGVLNGKTGMFPSN   68 (92)
T ss_dssp             SSCEEEECSCBCCCSSSCCCBCSSCEEECCCG-GGSSCBCCEETTEECCBCSS
T ss_pred             CCeEEEEccccCCCCCccccccCCCEEEEeEe-cCCCEEEEEECCeEEEeehH
Confidence            44579999999999999999999999999987 56788877777666666653

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=97.84  E-value=6.3e-06  Score=54.17  Aligned_cols=49  Identities=18%  Similarity=-0.075  Sum_probs=40.2

Q ss_pred             cEEEcccccCC--CccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQ--THLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~--~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+.  ..++|+|++||+|.++.. ...+||.+.++....+++.+
T Consensus         3 ~~~al~dy~~~~~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~fP~~   53 (67)
T 2bzy_A            3 FAKAIQKRVPCAYDKTALALEVGDIVKVTRM-NINGQWEGEVNGRKGLFPFT   53 (67)
T ss_dssp             EEEECSCBCSEEECTTBCCBCTTCEEEEEEE-CSSSEEEEEETTEEEEEEGG
T ss_pred             EEEEeeeECCCCCCCCccccCCCCEEEEEEe-cCCCeEEEEeCCcEEEEehH
Confidence            47899999998  999999999999999987 56788877766666666553

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=97.83  E-value=7.8e-06  Score=51.88  Aligned_cols=49  Identities=24%  Similarity=0.220  Sum_probs=40.0

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+...++|+|++||+|.++.. ...+||.+..+.-..+++.+
T Consensus         3 ~a~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~~   51 (58)
T 4e6r_A            3 PAFVXFAYVAEREDELSLVXGSRVTVMEX-CSDGWWRGSYNGQIGWFPSN   51 (58)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEEE-CTTSEEEEEETTEEEEEEGG
T ss_pred             EEEECccCCCCCCCEeeEeCCCEEEEeEc-CCCCEEEEEECCcEEEEehH
Confidence            47899999999999999999999999987 46788876666655665543

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=97.83  E-value=8.5e-06  Score=53.32  Aligned_cols=50  Identities=18%  Similarity=0.200  Sum_probs=39.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||... .+.-..+++.+
T Consensus         4 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~~g~~G~~P~~   54 (65)
T 1b07_A            4 EYVRALFDFNGNDEEDLPFKKGDILRIRDK-PEEQWWNAEDSEGKRGMIPVP   54 (65)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEC-SSSSEEEEECTTSCEEEEEGG
T ss_pred             eEEEECCcCCCCCCCccCCcCCCEEEEEEe-cCCCeEEEEECCCCEEEEChH
Confidence            358999999999999999999999999987 456777654 55555555553

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=97.83  E-value=1e-05  Score=52.55  Aligned_cols=50  Identities=22%  Similarity=0.151  Sum_probs=40.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   55 (64)
T 2ak5_A            6 QLVVRAKFNFQQTNEDELSFSKGDVIHVTRV-EEGGWWEGTHNGRTGWFPS   55 (64)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEEC-CTTSEEEEEETTEEEEEEG
T ss_pred             CEEEEEccccCCcCcCcccCCCCCEEEEeEe-cCCCEEEEEECCCEEEEeh
Confidence            3468999999999999999999999999987 4578887666665555554

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.83  E-value=9.5e-06  Score=53.70  Aligned_cols=51  Identities=12%  Similarity=0.195  Sum_probs=39.7

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchh-hhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN-EIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~-~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++......+||....+ .-..+++.
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~vl~~~~~~gW~~~~~~~g~~G~~P~   58 (70)
T 2ct4_A            7 GGHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPT   58 (70)
T ss_dssp             SCEEEESSCBCCCSTTCCCBCTTCEEEEEECCSSSCEEEEECSSSCEEEEEG
T ss_pred             CCEEEEcccCCCCCCCcCCCCCCCEEEEEeccCCCCeEEEEeCCCCEEEEEh
Confidence            4569999999999999999999999999987545678865444 44445444

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.83  E-value=7.1e-06  Score=55.85  Aligned_cols=53  Identities=8%  Similarity=0.077  Sum_probs=42.2

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-cccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.... ..+||....+.-..+++.+
T Consensus        16 ~~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~~   69 (80)
T 2d8h_A           16 QPIEVTALYSFEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKLRGQTGIFPAN   69 (80)
T ss_dssp             SCEEEECSSCEECSSTTBCEECTTCEEEEEECCSCSSSEEEEEETTEEEEEEGG
T ss_pred             CCEEEEECccCCcCCCCeeeEcCCCEEEEeECcCCCCCeEEEEECCEEEEEchh
Confidence            4456899999999999999999999999998743 4788876666666665553

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=97.82  E-value=1e-05  Score=53.12  Aligned_cols=50  Identities=24%  Similarity=0.284  Sum_probs=39.6

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhh--hhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNE--IKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~--l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+.  -..+++.
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~~g~~G~~P~   57 (67)
T 2o9s_A            6 TGEAIAKFNFNGDTQVEMSFRKGERITLLRQ-VDENWYEGRIPGTSRQGIFPI   57 (67)
T ss_dssp             SEEEEECSCBCCSSTTBCCBCTTCEEEEEEE-CSSSEEEEECTTSSCEEEEEG
T ss_pred             CEEEEECccCCcCCcCccCCCCCCEEEEEEe-cCCCEEEEEECCCCCEEEECh
Confidence            4568999999999999999999999999986 567888655544  4455544

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=97.82  E-value=9.2e-06  Score=55.91  Aligned_cols=52  Identities=10%  Similarity=0.193  Sum_probs=41.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ..++||.+..+.-..+++.+
T Consensus        16 ~~~~~~Alydy~a~~~~eLsf~~Gd~i~Vl~~-~~~gWw~g~~~g~~G~~P~~   67 (83)
T 1neg_A           16 GKELVLALYDYQEKSPREVTMKKGDILTLLNS-TNKDWWKVEVNDRQGFVPAA   67 (83)
T ss_dssp             -CCEEEESSCBCCSSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             CceEEEEccccCCCCCCccccCCCCEEEEEEe-cCCCEEEEEECCeEEEEEHH
Confidence            34568999999999999999999999999987 46688876666666666553

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=97.82  E-value=7.9e-06  Score=54.61  Aligned_cols=51  Identities=12%  Similarity=0.135  Sum_probs=41.0

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus         6 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   56 (73)
T 2dbm_A            6 SGPCCRALYDFEPENEGELGFKEGDIITLTNQ-IDENWYEGMLHGHSGFFPI   56 (73)
T ss_dssp             CCCEEEESSCBCCCSTTCCCBCTTCEEECCBC-SSSSEEEEEETTEEEEEES
T ss_pred             CCCEEEEccccCCCCCCCccCCCCCEEEEEEe-cCCCEEEEEECCCEEEech
Confidence            34568999999999999999999999999987 4678887666655555544

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.81  E-value=1.2e-05  Score=52.98  Aligned_cols=50  Identities=14%  Similarity=0.106  Sum_probs=40.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   56 (68)
T 1x2p_A            7 GEEFVAIADYAATDETQLSFLRGEKILILRQ-TTADWWWGERAGCCGYIPA   56 (68)
T ss_dssp             CCEEEESSCCCCSSTTBCCCCTTCEEEEEEC-CSSSEEEEECTTCCEEEES
T ss_pred             CCEEEECceECCCCcCCcCCCCCCEEEEEEc-CCCCEEEEEECCeEEEEeh
Confidence            3568999999999999999999999999987 4678887666655555544

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=97.81  E-value=9.8e-06  Score=53.44  Aligned_cols=49  Identities=18%  Similarity=0.207  Sum_probs=38.9

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++..+  ++||... ++.-..+++.+
T Consensus         5 ~~~~Alydy~a~~~~ELsf~~Gd~i~vl~~~--~~Ww~~~~~~g~~G~~Psn   54 (67)
T 2b86_A            5 VIVIAKWDYTAQQDQELDIKKNERLWLLDDS--KTWWRVRNAANRTGYVPSN   54 (67)
T ss_dssp             EEEEESSCBCCSSTTSCCBCTTCEEEEEECS--SSSCEEECTTSCEEECCCC
T ss_pred             eEEEEeeeECCCCCCccccCCCCEEEEEecC--CCeEEEEeCCCCEEEeChH
Confidence            4589999999999999999999999999873  5777544 45555565543

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=97.81  E-value=9.6e-06  Score=51.61  Aligned_cols=49  Identities=18%  Similarity=0.150  Sum_probs=40.0

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.+
T Consensus         5 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   53 (58)
T 1zlm_A            5 VFRALYTFEPRTPDELYFEEGDIIYITDM-SDTNWWKGTSKGRTGLIPSN   53 (58)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             EEEECccCCCCCCCCccCCCCCEEEEEEe-CCCCEEEEEECCCEEEEehH
Confidence            57899999999999999999999999987 66788876656555555543

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=97.80  E-value=7.2e-06  Score=53.98  Aligned_cols=50  Identities=18%  Similarity=0.201  Sum_probs=41.0

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   56 (68)
T 1wi7_A            7 GRRCQVAFSYLPQNDDELELKVGDIIEVVGE-VEEGWWEGVLNGKTGMFPS   56 (68)
T ss_dssp             CCCEEESSCBCCSSTTBCCBCTTCEECCCEE-EETTEEEECSTTCCEEEET
T ss_pred             CCEEEECccCCcCCCCCccCcCCCEEEEEEc-CCCCeEEEEECCcEEEEch
Confidence            3568999999999999999999999999986 5678887666666655554

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=97.80  E-value=9.7e-06  Score=51.51  Aligned_cols=49  Identities=14%  Similarity=0.177  Sum_probs=40.0

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.+
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   52 (58)
T 2vwf_A            4 YVQALFDFDPQEDGELGFRRGDFIHVMDN-SDPNWWKGACHGQTGMFPRN   52 (58)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             EEEECceECCCCcCCcCCCCCCEEEEEEc-CCCCEEEEEECCcEEEEchH
Confidence            57899999999999999999999999987 56788876656666665543

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=97.80  E-value=9.6e-06  Score=52.67  Aligned_cols=50  Identities=18%  Similarity=0.183  Sum_probs=40.2

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+...++|+|++||+|.++.. ...+||.+.++.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~   56 (65)
T 3u23_A            7 KRQCKVLFEYIPQNEDELELKVGDIIDINEE-VEEGWWSGTLNNKLGLFPS   56 (65)
T ss_dssp             -CEEEECSCBCCSSTTBCCBCTTCEEEEEEE-EETTEEEEEETTEEEEEEG
T ss_pred             CeEEEEeeeeCCCCcCCcCCCCCCEEEEEEe-cCCCEEEEEECCCEEEeeh
Confidence            4568999999999999999999999999986 5678887666665555554

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.80  E-value=1.1e-05  Score=54.69  Aligned_cols=51  Identities=14%  Similarity=0.126  Sum_probs=41.2

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ..++||...++.-..+++.+
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   57 (78)
T 2yuo_A            7 GRRAKALLDFERHDDDELGFRKNDIITIISQ-KDEHCWVGELNGLRGWFPAK   57 (78)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             ceEEEECccCCCCCCCCccCCCCCEEEEEEe-cCCCEEEEEECCCEEEEehH
Confidence            3568999999999999999999999999986 56777766666666666553

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.80  E-value=9.7e-06  Score=56.50  Aligned_cols=51  Identities=18%  Similarity=0.219  Sum_probs=40.8

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchh--hhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN--EIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~--~l~e~~~~  182 (225)
                      ..+.++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+  .-..+++.
T Consensus        16 ~~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~~~g~~G~fP~   68 (90)
T 2yup_A           16 EYGEAVAQYTFKGDLEVELSFRKGEHICLIRK-VNENWYEGRITGTGRQGIFPA   68 (90)
T ss_dssp             GSEEEEECSCCCCCSSSBCCCCTTCEEEESSC-CCSSEEEEECTTTCCEEEEEG
T ss_pred             cceEEEEeecCCcCCcCcCCCCCCCEEEEEEE-cCCCeEEEEECCCCCEEEEeh
Confidence            44678999999999999999999999999987 56788865554  44555554

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=97.80  E-value=1.3e-05  Score=53.04  Aligned_cols=51  Identities=25%  Similarity=0.288  Sum_probs=39.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhh--hhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNE--IKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~--l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||....+.  -..+++.
T Consensus         6 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~~g~~G~~P~   58 (70)
T 2ecz_A            6 SGGEAIAKFNFNGDTQVEMSFRKGERITLLRQ-VDENWYEGRIPGTSRQGIFPI   58 (70)
T ss_dssp             CCBCEEESSCCCCCSTTBCCCCTTCBCEEEEE-EETTEEEEEETTTTEEEEECT
T ss_pred             CCCEEEECccCCCCCcCCcCCCCCCEEEEEEe-cCCCeEEEEECCCCCEEEEch
Confidence            34568999999999999999999999999986 567788655443  4444444

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=97.79  E-value=1.5e-05  Score=51.40  Aligned_cols=50  Identities=8%  Similarity=0.111  Sum_probs=39.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++..+  ++||...  .+.-..+++.
T Consensus         5 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~~~~g~~G~~P~   56 (62)
T 2iim_A            5 QDNLVIALHSYEPSHDGDLGFEKGEQLRILEQS--GEWWKAQSLTTGQEGFIPF   56 (62)
T ss_dssp             TTCEEEESSCBCCCSTTBCCBCTTCEEEEEECC--SSEEEEEETTTCCEEEEEG
T ss_pred             CCcEEEEcccCCCCCCCCcCCCCCCEEEEEEcC--CCEEEEEECCCCCEEEEEH
Confidence            345689999999999999999999999999873  4777654  4555555554

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=97.78  E-value=1e-05  Score=53.80  Aligned_cols=51  Identities=10%  Similarity=0.073  Sum_probs=40.1

Q ss_pred             cCcEEEcccccC-CCccccccccccceEEecccccccccccchh--hhhhccch
Q psy15850        132 EGQARAKFNFVA-QTHLELSLVKESPHKYVDSEVTLQYRRPVRN--EIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~-~~~~els~~~g~~v~~~~~~~~~~~~f~~~~--~l~e~~~~  182 (225)
                      ...++|+|+|.+ ..+++|+|++||+|.++..+...+||....+  .-..+++.
T Consensus         7 ~~~~~al~dy~a~~~~~eLs~~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~   60 (72)
T 1spk_A            7 GQKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPS   60 (72)
T ss_dssp             SCEEECSSCBCCSSCSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEG
T ss_pred             ceEEEEeeeeCCCCCCCCCcCCCCCEEEEeEccCCCCcEEEEECCCCCEEEEeh
Confidence            356899999996 8999999999999999986567788866554  45555554

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=97.78  E-value=1.2e-05  Score=52.88  Aligned_cols=50  Identities=26%  Similarity=0.245  Sum_probs=40.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~   56 (68)
T 2dl3_A            7 GRPARAKFDFKAQTLKELPLQKGDIVYIYKQ-IDQNWYEGEHHGRVGIFPR   56 (68)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEEEC-CSTTEEEEECSSCEEEEET
T ss_pred             CcEEEECccCCCCCcCCccCCCCCEEEEeEe-cCCCEEEEEECCCEEEEch
Confidence            3468999999999999999999999999986 5678887666655555554

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.78  E-value=1.1e-05  Score=53.87  Aligned_cols=52  Identities=23%  Similarity=0.204  Sum_probs=41.3

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-cccccccchhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYRRPVRNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~f~~~~~l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.... ..+||....+.-..+++.
T Consensus         6 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~~P~   58 (73)
T 2dm1_A            6 SGGTAVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPS   58 (73)
T ss_dssp             SSSEEEESSCBCCCSTTBCCBCTTCEEECCBSSSSSSSCEEEEETTEEEEECS
T ss_pred             CCCEEEECccCCcCCCCcCCCCCCCEEEEEEecCCCCCeEEEEECCeEEEeeh
Confidence            3456899999999999999999999999998733 358887666665555554

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.78  E-value=1.9e-05  Score=54.76  Aligned_cols=52  Identities=15%  Similarity=0.161  Sum_probs=41.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+.-..+++.+
T Consensus        16 ~~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   67 (88)
T 1x2q_A           16 VARKVRALYDFEAVEDNELTFKHGEIIIVLDD-SDANWWKGENHRGIGLFPSN   67 (88)
T ss_dssp             CCEEEEESSCCCCCSSSCCCCCSSCEEEEEEC-SCSSSEEEEETTEEEEECGG
T ss_pred             CCeEEEEcccCCCCCcCccCCCCCCEEEEEEe-CCCCEEEEEECCcEEEEehH
Confidence            34568999999999999999999999999986 56788876665556666553

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=97.78  E-value=1.2e-05  Score=50.88  Aligned_cols=48  Identities=19%  Similarity=0.217  Sum_probs=38.1

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccch
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~  182 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||... .+.-..+++.
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~g~~G~~P~   51 (57)
T 1cka_A            3 YVRALFDFNGNDEEDLPFKKGDILRIRDK-PEEQWWNAEDSEGKRGMIPV   51 (57)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEC-SSSSEEEEECTTSCEEEEEG
T ss_pred             EEEECCcCCCCCCCCCCCCCCCEEEEEEe-cCCCcEEEEeCCCCEEEEeH
Confidence            47899999999999999999999999987 456777654 5555555554

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.77  E-value=1.1e-05  Score=53.25  Aligned_cols=50  Identities=4%  Similarity=0.029  Sum_probs=41.0

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++..  ..+||...++.-..+++.+
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~g~~G~~P~~   57 (69)
T 1uhf_A            8 GEEYIALYPYSSVEPGDLTFTEGEEILVTQK--DGEWWTGSIGDRSGIFPSN   57 (69)
T ss_dssp             SEEEECSSCBCCSSSSBCCBCTTCEEEECEE--ETTEEEECSTTCCEEECGG
T ss_pred             CCEEEEeeeECCCCcCccCCCCCCEEEEEEe--CCCEEEEEeCCcEEEEchH
Confidence            4468999999999999999999999999876  5788876666666666553

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=97.77  E-value=1.4e-05  Score=53.02  Aligned_cols=50  Identities=20%  Similarity=0.196  Sum_probs=40.1

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||.+.  .+.-..+++.+
T Consensus         7 ~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~-~~~gW~~g~~~~~g~~G~fP~~   58 (71)
T 2fpf_A            7 QTHRAIFRFVPRHEDELELEVDDPLLVELQ-AEDYWYEAYNMRTGARGVFPAY   58 (71)
T ss_dssp             CCEEECSCBCCSSTTBCCBCTTCEEEEEEE-CTTSEEEEEETTTTEEEEEEGG
T ss_pred             eEEEECeeECccCCCcccCcCCcEEEEeEe-cCCCEEEEEECCCCCEEEeehH
Confidence            468999999999999999999999999876 567888654  56655665553

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.77  E-value=1.2e-05  Score=56.47  Aligned_cols=51  Identities=14%  Similarity=0.003  Sum_probs=41.4

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccc-ccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++... ...+||.+.++.-..++..
T Consensus         5 ~~~~~Alydy~a~~~~eLsf~~Gd~i~v~~~~~~~~gWw~g~~~g~~G~~P~   56 (93)
T 1uff_A            5 SSGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPC   56 (93)
T ss_dssp             CCCEEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEET
T ss_pred             CEEEEECccCCCCCCCCcCCCCCCEEEEeEccCCCCCEEEEEECCCEEEech
Confidence            35689999999999999999999999999873 2678887666666666554

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.77  E-value=1.7e-05  Score=53.85  Aligned_cols=51  Identities=14%  Similarity=0.066  Sum_probs=40.8

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++..  ..+||....  +.-..+++.+
T Consensus        16 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~--~~gW~~g~~~~~g~~G~fP~~   68 (79)
T 1x6b_A           16 DLPQVEITKAFFAKQADEVTLQQADVVLVLQQ--EDGWLYGERLRDGETGWFPED   68 (79)
T ss_dssp             SCCEEEESSCCCCCSSSBCCCCTTEEEEEEEE--ETTEEEEEETTTCCEEEECGG
T ss_pred             CCCEEEECeeECCCCcCCcCCCCCCEEEEEEe--CCCEEEEEECCCCCEEEEchH
Confidence            44679999999999999999999999999987  677886544  5555555543

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.77  E-value=1.5e-05  Score=52.85  Aligned_cols=50  Identities=12%  Similarity=0.096  Sum_probs=40.3

Q ss_pred             CcEEEcccccCCCccccccccccceEEeccc--ccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSE--VTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~--~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++...  ...+||...++.-..+++.
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~~g~~G~~P~   59 (71)
T 2cre_A            8 LLARALYDNCPDCSDELAFSRGDILTILEQHVPESEGWWKCLLHGRQGLAPA   59 (71)
T ss_dssp             EEEEESSCCCCSSSSBCCCCSSCCEEEEESCCTTSTTEEEEESSSCCEEEET
T ss_pred             EEEEECcccCcCCCCCCCCCCCCEEEEeEcCCCCCCCcEEEEECCCEEEEeh
Confidence            4689999999999999999999999999873  2678887666665555554

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.77  E-value=9e-06  Score=56.03  Aligned_cols=51  Identities=20%  Similarity=0.272  Sum_probs=40.1

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccccccccccc-chhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP-VRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~-~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||.. ..+.-..+++.+
T Consensus        19 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~~~~~g~~G~~P~~   70 (85)
T 2yuq_A           19 ETVVIALYDYQTNDPQELALRRNEEYCLLDS-SEIHWWRVQDRNGHEGYVPSS   70 (85)
T ss_dssp             SCEEEESSCCCCSCSSBCCCCBTEEEEEEEC-CSSSEEEEECSSSCEEEEETT
T ss_pred             CeEEEECcCCCCCCCCcCCCCCCCEEEEEEe-cCCCeEEEEECCCCEEEEehH
Confidence            3568999999999999999999999999987 45677765 455555555543

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.76  E-value=1.1e-05  Score=53.42  Aligned_cols=50  Identities=16%  Similarity=0.056  Sum_probs=40.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   57 (70)
T 2ega_A            8 LEQYVVVSNYKKQENSELSLQAGEVVDVIEK-NESGWWFVSTSEEQGWVPA   57 (70)
T ss_dssp             CBCEECCSCCCCCSSSSCCCCTTCBCEEEEE-CTTSEEEEECSSCEEEEEG
T ss_pred             CcEEEECceECCCCCCcccCCCCCEEEEEEc-cCCCeEEEEECCCEEEEeh
Confidence            4568999999999999999999999999987 4578887665555555554

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.76  E-value=1.6e-05  Score=54.22  Aligned_cols=51  Identities=16%  Similarity=0.128  Sum_probs=41.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   59 (81)
T 2ysq_A            9 SIVSAEAVWDHVTMANRELAFKAGDVIKVLDA-SNKDWWWGQIDDEEGWFPA   59 (81)
T ss_dssp             CCEEEEESSCCCCSSSSSCCCCTTCEEEEEEC-CSSSEEEEECSSCEEEEEG
T ss_pred             CceEEEEeeeECCCCCCcCCCCCCCEEEEEEE-cCcCEEEEEECCCEEEech
Confidence            34568999999999999999999999999987 4678887666655555554

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.76  E-value=1.3e-05  Score=52.80  Aligned_cols=50  Identities=10%  Similarity=0.103  Sum_probs=39.3

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhh-hccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIK-ELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~-e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||...++... .+++.
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~~~~G~~P~   57 (69)
T 2eqi_A            7 GRTVKALYDYKAKRSDELTFCRGALIHNVSK-EPGGWWKGDYGTRIQQYFPS   57 (69)
T ss_dssp             CCEEEESSCBCCCSSSCCCBCTTCEEESCCC-CSSSCEEEEETTEEEEEECG
T ss_pred             CcEEEECeeECCCCcCccCCCCCCEEEEEEc-CCCCeEEEEECCCCEEEEch
Confidence            4568999999999999999999999999987 55678865554444 45544

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.75  E-value=1.3e-05  Score=52.72  Aligned_cols=50  Identities=18%  Similarity=0.128  Sum_probs=40.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   56 (68)
T 1x2k_A            7 GKVFRALYTFEPRTPDELYFEEGDIIYITDM-SDTNWWKGTSKGRTGLIPS   56 (68)
T ss_dssp             SEEEEESSCCCCCSTTBCCCCSSCEEEEEEC-SCSSEEEEESSSCEEEEET
T ss_pred             cEEEEECceECCCCCCcccCCCCCEEEEEEc-CCCCEEEEEECCcEEEEeh
Confidence            3468999999999999999999999999987 6678886655655555554

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=97.75  E-value=1.3e-05  Score=52.95  Aligned_cols=50  Identities=18%  Similarity=0.164  Sum_probs=40.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   57 (69)
T 2dil_A            8 AQEYRALYDYTAQNPDELDLSAGDILEVILE-GEDGWWTVERNGQRGFVPG   57 (69)
T ss_dssp             CCEEECCSCBCCSSSSSCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEG
T ss_pred             CcEEEECccCCccCcCccCCCCCCEEEEEEC-CCCCEEEEEECCCEEEEeh
Confidence            4568999999999999999999999999987 5678887666655555554

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.75  E-value=2.4e-05  Score=54.90  Aligned_cols=53  Identities=15%  Similarity=0.120  Sum_probs=42.5

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccc-cc--ccccccc--hhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VT--LQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~--~~~~f~~--~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++... ..  .+||.+.  ++.-..+++.+
T Consensus        15 ~~~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~   72 (94)
T 2e5k_A           15 NHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPEN   72 (94)
T ss_dssp             CCEEEEECSCBCCSSSSBCCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGG
T ss_pred             CCeEEEECCcCCCCCCCCcCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechH
Confidence            445789999999999999999999999999874 23  7888755  66666666653

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=97.75  E-value=1.4e-05  Score=52.61  Aligned_cols=51  Identities=8%  Similarity=0.034  Sum_probs=40.3

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccch-hhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR-NEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~-~~l~e~~~~~  183 (225)
                      ...++|+|+|.+...++|+|++||+|.++.. ...+||.+.. +.-..+++.+
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~g~~G~~P~~   57 (69)
T 4esr_A            6 APTVVALYDYTANRSDELTIHRGDIIRVFFK-DNEDWWYGSIGKGQEGYFPAN   57 (69)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEEE-CSSSEEEEEEETTEEEEEEGG
T ss_pred             cCEEEECccCCCCCcCcCCCCCCCEEEEEEe-cCCCeEEEEeCCCCEEEEchH
Confidence            3568999999999999999999999999986 4567886554 5555555554

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.75  E-value=1.2e-05  Score=54.15  Aligned_cols=52  Identities=17%  Similarity=0.095  Sum_probs=41.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||...++.-..+++.+
T Consensus         9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   60 (76)
T 1ujy_A            9 HQLIVKARFNFKQTNEDELSVCKGDIIYVTRV-EEGGWWEGTLNGRTGWFPSN   60 (76)
T ss_dssp             CCEEEECCSCBCCSSTTSCCBCSSCCEEESSC-CSSSCEEEEETTEEEEECTT
T ss_pred             CCEEEEECccCCcCCCCcccCCCCCEEEEEEe-cCCCEEEEEECCCEEEechH
Confidence            34568999999999999999999999999986 56788876666666666553

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.75  E-value=9.6e-06  Score=54.69  Aligned_cols=52  Identities=12%  Similarity=0.069  Sum_probs=41.3

Q ss_pred             cCcEEEcccccCCC-------ccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQT-------HLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~-------~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..       +.+|+|++||+|.++......+||...++.-+.+++.+
T Consensus         7 ~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~g~~G~~P~~   65 (76)
T 2csi_A            7 GRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGELNGQKGLVPSN   65 (76)
T ss_dssp             SEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSEEEEEETTEEEEEEGG
T ss_pred             ccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCeEEEEECCcEEEEehH
Confidence            34689999999998       89999999999999987444578876666666666553

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=97.75  E-value=1.8e-05  Score=51.62  Aligned_cols=50  Identities=18%  Similarity=0.214  Sum_probs=39.4

Q ss_pred             CcEEEcccccC-CCccccccccccceEEecccccccccccc--hhhhhhccchh
Q psy15850        133 GQARAKFNFVA-QTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~-~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+ ..+++|+|++||+|.++.. ...+||...  .+.-..+++.+
T Consensus         6 ~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~-~~~gW~~g~~~~~g~~G~~P~~   58 (65)
T 2j05_A            6 RRVRAILPYTKVPDTDEISFLKGDMFIVHNE-LEDGWMWVTNLRTDEQGLIVED   58 (65)
T ss_dssp             CEEEESSCBCCCTTSSBCCBCTTCEEEEEEE-CTTSEEEEEETTTCCEEEEEGG
T ss_pred             cEEEEccccCCCCCCCcCcCCCCCEEEEeEe-cCCCEEEEEECCCCCEEEEEhH
Confidence            45899999999 9999999999999999986 456777654  55555555543

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=97.75  E-value=2.6e-05  Score=57.03  Aligned_cols=40  Identities=18%  Similarity=0.081  Sum_probs=34.5

Q ss_pred             CcEEEcccccCCCccccccccccceEEecc----cccccccccc
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDS----EVTLQYRRPV  172 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~----~~~~~~~f~~  172 (225)
                      ..++|+|+|.+..+++|+|++||+|.++..    ....+||.+.
T Consensus        45 ~~~~Alydy~a~~~dELsf~~GDiI~Vl~~~~~~~~~~gWw~G~   88 (115)
T 1bb9_A           45 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGV   88 (115)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEE
T ss_pred             eEEEECCccCCCCCCccCcCCCCEEEEeeccCCcccCCCeEEEE
Confidence            468999999999999999999999999982    3667888653

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=97.74  E-value=1.7e-05  Score=52.02  Aligned_cols=52  Identities=15%  Similarity=0.223  Sum_probs=40.8

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+...++|+|++||+|.++.. ...+||... .+.-..+++.+
T Consensus         7 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~g~~G~~P~~   59 (67)
T 1aww_A            7 ELKKVVALYDYMPMNANDLQLRKGDEYFILEE-SNLPWWRARDKNGQEGYIPSN   59 (67)
T ss_dssp             CCCEEEBSSCCCCSSSSSCCCCSSCEEECCCC-CSSSEECCBCTTSCBCCEETT
T ss_pred             CCeEEEECccCCCCCCCCccCCCCCEEEEEEc-cCCCcEEEEECCCCEEEEchH
Confidence            34568999999999999999999999999987 456777654 56555665543

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.74  E-value=2e-05  Score=55.61  Aligned_cols=53  Identities=9%  Similarity=0.033  Sum_probs=41.3

Q ss_pred             CcCcEEEcccccCCC------ccccccccccceEEecccccccccccch-hhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQT------HLELSLVKESPHKYVDSEVTLQYRRPVR-NEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~------~~els~~~g~~v~~~~~~~~~~~~f~~~-~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..      +++|+|++||+|.++......+||...+ +.-..+++.+
T Consensus        16 ~~~~~~Alydy~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~g~~G~~Psn   75 (96)
T 1wie_A           16 KVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSN   75 (96)
T ss_dssp             CEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTT
T ss_pred             CCcEEEECCccCCCcccCCCCCCeeeECCCCEEEEeEecCCCCEEEEEECCCCEEEEchH
Confidence            334689999999988      9999999999999994446778886655 6666666553

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.74  E-value=1.3e-05  Score=54.56  Aligned_cols=49  Identities=6%  Similarity=-0.036  Sum_probs=40.0

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus         9 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~-~~~gWw~g~~~g~~G~~P~   57 (80)
T 2ekh_A            9 TSYMTCSAYQKVQDSEISFPAGVEVQVLEK-QESGWWYVRFGELEGWAPS   57 (80)
T ss_dssp             EEEEECSCBCCSSTTSCCBCTTCEEEEEEE-CTTSEEEEEETTEEEEEET
T ss_pred             CEEEECCCCCCCCCCccCcCCCCEEEEEEe-CCCCeEEEEECCCEEEEEh
Confidence            468999999999999999999999999987 4577887666655555554

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=97.74  E-value=1.4e-05  Score=53.06  Aligned_cols=51  Identities=20%  Similarity=0.180  Sum_probs=39.5

Q ss_pred             CcEEEcccccCCCcc-ccccccccceEEecccc----cccccccch-hhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHL-ELSLVKESPHKYVDSEV----TLQYRRPVR-NEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~-els~~~g~~v~~~~~~~----~~~~~f~~~-~~l~e~~~~~  183 (225)
                      ..++|+|+|.+++++ ||+|++||+|.++....    ..+||.... +.-..+++.+
T Consensus         8 ~~~~aly~y~a~~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~G~~G~~Psn   64 (69)
T 1nm7_A            8 HFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYN   64 (69)
T ss_dssp             -CEEECSCCCCSSTTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEETTTEEEEECGG
T ss_pred             eEEEEEecccCCCCCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeCCCCEEEecHH
Confidence            358999999999998 99999999999998743    357886554 5555666554

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=97.73  E-value=3e-05  Score=69.51  Aligned_cols=54  Identities=17%  Similarity=0.137  Sum_probs=47.8

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE-CCeEEEeeCCcEEee
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEII  118 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~-~g~~G~~P~nyv~~~  118 (225)
                      ++..|+|+|||...       ++++.+||++.+++..+..||..+. +|..|+||+.|+...
T Consensus       282 ~~~~V~alcdy~~~-------e~~i~kge~~~L~~ns~~~~W~V~~~~G~~~~vPavcf~ip  336 (450)
T 3r6n_A          282 KPIILRALCDYKQD-------QKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIP  336 (450)
T ss_dssp             SCCEEEESSCEEET-------TEEECTTCEEEEEECSSSSEEEEECSSSCCEEEEGGGEECC
T ss_pred             CCceEEEeccccCC-------eeeEecCCEEEEecCCCCCceEEecCCCCeeccceeEEecC
Confidence            35568999999977       9999999999999999999999994 679999999999654

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.73  E-value=1.6e-05  Score=53.89  Aligned_cols=50  Identities=18%  Similarity=0.072  Sum_probs=40.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   56 (79)
T 2yun_A            7 GRLCKALYSFQARQDDELNLEKGDIVIIHEK-KEEGWWFGSLNGKKGHFPA   56 (79)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEEEC-CSSSCEEEESSSCEEEECS
T ss_pred             CCEEEECccCCcCCCCCcCCCCCCEEEEEEc-CCCCEEEEEECCCEEEEEh
Confidence            3568999999999999999999999999986 5678887666665566554

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=97.72  E-value=1.3e-05  Score=52.12  Aligned_cols=40  Identities=10%  Similarity=0.165  Sum_probs=34.2

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN  174 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~  174 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||.+...
T Consensus         3 ~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~   42 (65)
T 2oaw_A            3 LVLALYDYQEKSPREVTMKKGDILTLLNS-TNKDWWKVEVK   42 (65)
T ss_dssp             EEEECSCBCCSSTTBCCBCTTCEEEEEEC-CSSSEEEEEEE
T ss_pred             EEEEcccCCccCCCCCCCCCCCEEEEEEc-CCCCEEEEEEc
Confidence            47899999999999999999999999987 56778865443

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=97.72  E-value=2.6e-05  Score=51.29  Aligned_cols=50  Identities=12%  Similarity=0.145  Sum_probs=39.3

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccccccccccc-chhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP-VRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~-~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++..+  .+||.. ..+.-..+++.+
T Consensus         8 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~~~~~~g~~G~~P~~   58 (68)
T 2k2m_A            8 LKWVLCNYDFQARNSSELSVKQRDVLEVLDDS--RKWWKVRDPAGQEGYVPYN   58 (68)
T ss_dssp             CCEEEESSCBCCCSSSBCCBCTTCEEEEEECS--SSEEEEECTTSCCEEEEGG
T ss_pred             CEEEEECccCCCCCCCcccCCCCCEEEEEEcC--CCeEEEEeCCCCEEEEEhh
Confidence            35689999999999999999999999999874  677754 445555555543

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=97.72  E-value=1.5e-05  Score=50.56  Aligned_cols=48  Identities=13%  Similarity=0.032  Sum_probs=37.7

Q ss_pred             cEEEcccc-cCCCccccccccccceEEecccccccccccchh--hhhhccch
Q psy15850        134 QARAKFNF-VAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN--EIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~-~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~--~l~e~~~~  182 (225)
                      .++|+|+| .+....+|+|++||+|.++.. ...+||.+...  .-..+++.
T Consensus         2 ~~~al~d~~~~~~~~eLs~~~Gd~i~v~~~-~~~gW~~g~~~~~g~~G~~P~   52 (58)
T 1zuy_A            2 MFEAAYDFPGSGSPSELPLKKGDVIYITRE-EPSGWSLGKLLDGSKEGWVPT   52 (58)
T ss_dssp             EEEESSCBCCCSCTTBCCBCTTCEEEEEEE-CTTSEEEEEESSCSCEEEEEG
T ss_pred             EEEEecccCCCCCCCcCCCCCCCEEEEEEe-cCCCeEEEEECCCCCEEEecH
Confidence            47899999 899999999999999999987 46778865544  44455444

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=97.72  E-value=1.6e-05  Score=52.17  Aligned_cols=50  Identities=16%  Similarity=0.213  Sum_probs=39.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||.+. .+.-..+++.+
T Consensus         3 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~g~~G~~P~~   53 (67)
T 1gl5_A            3 EIVVAMYDFQATEAHDLRLERGQEYIILEK-NDLHWWRARDKYGSEGYIPSN   53 (67)
T ss_dssp             SCEEECSCBCCSSSSBCCBCTTCEEEEEEC-SSSSEEEEECSSSCEEEEETT
T ss_pred             eEEEECccCCCCCCCeecCCcCCEEEEEEc-cCCCcEEEEECCCCEEEEEhH
Confidence            358999999999999999999999999987 556777654 45555555543

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=97.72  E-value=1.6e-05  Score=52.66  Aligned_cols=51  Identities=10%  Similarity=0.021  Sum_probs=40.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ....++|+|+|.+...++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus        12 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~   62 (72)
T 4glm_A           12 ALTYGVALYRFQALEPNELDFEVGDKIRILAT-LEDGWLEGSLKGRTGIFPY   62 (72)
T ss_dssp             -CCEEEESSCBCCCSTTBCCBCTTCEEEEEEE-CSTTEEEEEETTEEEEEEG
T ss_pred             CCeEEEECccCCCCCCCcCCCCCCCEEEEEEc-cCCCEEEEEECCcEEEECh
Confidence            34568999999999999999999999999987 4677886666665555544

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=97.71  E-value=2.4e-05  Score=51.81  Aligned_cols=51  Identities=12%  Similarity=0.137  Sum_probs=40.2

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccc-ccccccccc-hhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYRRPV-RNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~f~~-~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++... ...+||.+. .+.-..+++.
T Consensus         6 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~   58 (71)
T 1u5s_A            6 LHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPK   58 (71)
T ss_dssp             SSEEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEET
T ss_pred             cEEEEEcccCCCCCCCcccCCCCCEEEEEECCCCCCCCEEEEeCCCCEEEEeH
Confidence            35689999999999999999999999999873 467788653 5555555554

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=97.71  E-value=1.3e-05  Score=53.62  Aligned_cols=49  Identities=16%  Similarity=0.110  Sum_probs=38.3

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchh--hhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN--EIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~--~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ..++||.+..+  .-..+++.
T Consensus         6 ~~~~Alydy~a~~~~eLs~~~Gd~i~v~~~-~~~gWw~g~~~~~g~~G~~P~   56 (73)
T 2lcs_A            6 QRAVALYDFEPENDNELRLAEGDIVFISYK-HGQGWLVAENESGSKTGLVPE   56 (73)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEE-ETTTEEEEECTTSSCEEEEES
T ss_pred             CEEEECccCCCCCCCccCCcCCCEEEEEEE-cCCCEEEEEECCCCCEEEeeH
Confidence            458999999999999999999999999987 66778865443  44444443

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.71  E-value=1.5e-05  Score=52.99  Aligned_cols=50  Identities=18%  Similarity=0.191  Sum_probs=39.3

Q ss_pred             cCcEEEcccccC-CCccccccccccceEEecccccccccccc--hhhhhhccch
Q psy15850        132 EGQARAKFNFVA-QTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~-~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~  182 (225)
                      ...++|+|+|.+ ..+++|+|++||+|.++.. ...+||...  .+.-..+++.
T Consensus         7 ~~~~~Alydy~~~~~~~eLsf~~Gd~i~v~~~-~~~~W~~g~~~~~g~~G~~P~   59 (71)
T 2gqi_A            7 GRRVRAILPYTKVPDTDEISFLKGDMFIVHNE-LEDGWMWVTNLRTDEQGLIVE   59 (71)
T ss_dssp             CCCEEESSCCCCCTTSSCCCCCTTCBCCCCEE-CSSSCEEEECTTTCCEEEECT
T ss_pred             CCEEEECcccCCCCCCCCCCCCCCCEEEEEEe-cCCCEEEEEECCCCCEEEeeH
Confidence            356899999999 9999999999999999987 556777543  5555555554

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=97.71  E-value=1.7e-05  Score=53.97  Aligned_cols=50  Identities=16%  Similarity=0.145  Sum_probs=40.3

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||.+..  +.-..+++.+
T Consensus         6 ~~~~Alydy~~~~~~eLs~~~Gd~i~vl~~-~~~~Ww~g~~~~~g~~G~~P~~   57 (79)
T 3cqt_A            6 TLFEALYDYEARTEDDLSFHKGEKFQILNS-SEGDWWEARSLTTGETGYIPSI   57 (79)
T ss_dssp             CCEEESSCBCCCSTTBCCBCTTCEEEEEEC-TTSSEEEEEETTTCCEEEEEGG
T ss_pred             cEEEECccCCCCCcCcCCCCCCCEEEEEEe-cCCCeEEEEECCCCCEEEeehH
Confidence            468999999999999999999999999987 4567886544  6666666654

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.71  E-value=1.4e-05  Score=53.84  Aligned_cols=49  Identities=22%  Similarity=0.307  Sum_probs=40.1

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus        11 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   59 (76)
T 2epd_A           11 VEAVACFAYTGRTAQELSFRRGDVLRLHER-ASSDWWRGEHNGMRGLIPH   59 (76)
T ss_dssp             EEEEESSCEECSSTTBCEECTTCEEEEEEE-EETTEEEEEETTEEEEEES
T ss_pred             EEEEECcCCCCCCCCccCCCCCCEEEEEEe-CCCCEEEEEECCcEEEEeh
Confidence            468999999999999999999999999987 4578887666665555554

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.71  E-value=3.1e-05  Score=52.48  Aligned_cols=50  Identities=16%  Similarity=0.118  Sum_probs=40.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+...++|+|++||+|.++.. ...+||...++.-..+++.
T Consensus        17 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   66 (79)
T 1x69_A           17 GITAVALYDYQAAGDDEISFDPDDIITNIEM-IDDGWWRGVCKGRYGLFPA   66 (79)
T ss_dssp             CCCEEESSCCCCSSSSBCCCCTTCEEEEEEE-CSSSEEEEEETTEEEEEET
T ss_pred             CeEEEECccCCCCCCCCcCcCCCCEEEEeEe-cCCCeEEEEECCcEEEech
Confidence            3468999999999999999999999999976 5678887666665555554

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.70  E-value=1.8e-05  Score=54.55  Aligned_cols=51  Identities=12%  Similarity=0.078  Sum_probs=40.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecc-cccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDS-EVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~-~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ....+||.+.++....+++.
T Consensus         8 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~fP~   59 (85)
T 2dlp_A            8 SGYVIALRSYITDNCSLLSFHRGDLIKLLPVATLEPGWQFGSAGGRSGLFPA   59 (85)
T ss_dssp             CCEEEESSCBCCSSSSBCCBCTTCEEEECCCSCCCTTEEEEESSSCEEEEET
T ss_pred             CEEEEECCCCCccCcCCccCcCCCEEEEEEccCCCCCeEEEEECCEEEEech
Confidence            3468999999999999999999999999985 35678887666665555554

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.70  E-value=3e-05  Score=51.87  Aligned_cols=51  Identities=10%  Similarity=0.068  Sum_probs=40.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++..+  .+||...++.-..+++.+
T Consensus         9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~~g~~G~~P~~   59 (74)
T 1j3t_A            9 ENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQ--ENWWFGEVHGGRGWFPKS   59 (74)
T ss_dssp             CCCEEEESSCBCCCSTTBCCBCTTCEEEEEEEC--SSEEEEESTTCCCEEEGG
T ss_pred             CCeEEEECCCCCCCCCCccCCCCCCEEEEEecC--CCEEEEEECCcEEEEchH
Confidence            345689999999999999999999999999873  678876666656665543

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.70  E-value=1.6e-05  Score=52.70  Aligned_cols=50  Identities=8%  Similarity=-0.049  Sum_probs=40.0

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         8 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   57 (71)
T 2dnu_A            8 EEKYVTVQPYTSQSKDEIGFEKGVTVEVIRK-NLEGWWYIRYLGKEGWAPA   57 (71)
T ss_dssp             SEEEECSSCBCCSSTTBCCBCTTCEEEECCC-CSSSEEEEEETTEEEEEEG
T ss_pred             CCEEEECCccCCCCCCCCcCCCCCEEEEeEC-CCCCeEEEEECCcEEEEEH
Confidence            4568999999999999999999999999987 4577886655555555554

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=97.69  E-value=1.3e-05  Score=52.66  Aligned_cols=51  Identities=14%  Similarity=0.046  Sum_probs=39.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||... .+.-..+++.
T Consensus         9 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~g~~G~~P~   60 (68)
T 1s1n_A            9 TGEEYIAVGDFTAQQVGDLTFKKGEILLVIEK-KPDGWWIAKDAKGNEGLVPR   60 (68)
T ss_dssp             CCEEEEECSCBCCSSSSCCCBCSSEEEEECSC-CSSSEEEEECSSSCEEEEES
T ss_pred             CCCEEEEcccCCCCCCCcCCCCCCCEEEEEEc-CCCCeEEEEECCCCEEEEeh
Confidence            34568999999999999999999999999987 556787654 4554555544

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.69  E-value=2.9e-05  Score=52.95  Aligned_cols=53  Identities=13%  Similarity=0.080  Sum_probs=40.5

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++......+||...  .+.-..+++.+
T Consensus        16 ~~~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~   70 (81)
T 1x6g_A           16 PGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAG   70 (81)
T ss_dssp             TTCEEEESSCBSSCCTTCCCBCTTCEEEEEECCCSSSEEEEEETTTCCEEEEEGG
T ss_pred             CCCEEEECCCCCcCCCCCCCCCCCCEEEEEeccCCCCeEEEEeCCCCCEEEEehH
Confidence            345699999999999999999999999999874444788653  34555555543

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=97.69  E-value=1.9e-05  Score=54.40  Aligned_cols=50  Identities=14%  Similarity=0.181  Sum_probs=40.2

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++...  ++||....  +.-..+++.+
T Consensus        25 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~~~~g~~G~~P~~   76 (86)
T 2oi3_A           25 DIIVVALYDYEAIHHEDLSFQKGDQMVVLEES--GEWWKARSLATRKEGYIPSN   76 (86)
T ss_dssp             SEEEEESSCCCCSSSSCCCCCTTCEEEEEEES--SSEEEEEETTTCCEEEEEGG
T ss_pred             CcEEEECccCCCCCCCcCcCCCCCEEEEEEcC--CCeEEEEECCCCCEEEEehH
Confidence            35689999999999999999999999999885  57886554  6656666553

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=97.69  E-value=2.1e-05  Score=50.58  Aligned_cols=49  Identities=10%  Similarity=0.157  Sum_probs=39.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+....+|+|++|++|.++.. ...+||....+.-..+++.
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~~~~g~~G~~P~   55 (62)
T 3ngp_A            7 ELVLVLYDYQEKSPRELTVKKGDILTLLNS-TNKDWWKIEVNGRQGFVPA   55 (62)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEG
T ss_pred             EEEEECcCCCCCCCCCccCCCCCEEEEeEe-cCCCeEEEEECCEEEEEEH
Confidence            468999999999999999999999999987 4577886655555555544

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.68  E-value=1.9e-05  Score=53.10  Aligned_cols=42  Identities=17%  Similarity=0.108  Sum_probs=35.3

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN  174 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~  174 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||.....
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~   48 (77)
T 2d8j_A            7 GQYFVALFDYQARTAEDLSFRAGDKLQVLDT-SHEGWWLARHL   48 (77)
T ss_dssp             CEEEEESSCBCCSSSSBCCBCTTCCEEEEEC-CSSSEEEEEEC
T ss_pred             CCEEEEccCCCCCCCCccCCCCCCEEEEEEC-CCCCeEEEEEC
Confidence            3468999999999999999999999999987 46778765443

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.68  E-value=1.3e-05  Score=56.61  Aligned_cols=52  Identities=15%  Similarity=0.031  Sum_probs=41.3

Q ss_pred             cCcEEEcccccCC--------CccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQ--------THLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~--------~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+.        .+.+|+|++||+|.++......|||....+.-+.+++.+
T Consensus        17 ~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gWw~g~~~g~~G~~P~~   76 (97)
T 2csq_A           17 ARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCN   76 (97)
T ss_dssp             CEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCEEEEEETTEEEEEETT
T ss_pred             ceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEecCCCCeEEEEECCcEEEEehH
Confidence            3468999999998        789999999999999976456778876666666666553

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.68  E-value=2.1e-05  Score=54.52  Aligned_cols=51  Identities=18%  Similarity=-0.092  Sum_probs=40.8

Q ss_pred             cCcEEEcccccC--CCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVA--QTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~--~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+  +..++|+|++||+|.++.. ...+||.+.++.-+.+++.+
T Consensus        16 ~~~~~alydy~~~a~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~fP~~   68 (88)
T 2dbk_A           16 PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRM-NINGQWEGEVNGRKGLFPFT   68 (88)
T ss_dssp             CEEEEECSCBCCCTTCSSBCCBCTTCEEEEEEE-CTTSCEEEECSSCEEEECTT
T ss_pred             CEEEEEcccccCCCCCCCcccCCCCCEEEEEEe-cCCCEEEEEeCCCEEEEehH
Confidence            346899999994  4999999999999999987 56788877666666666553

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=97.68  E-value=2.2e-05  Score=51.76  Aligned_cols=49  Identities=12%  Similarity=0.050  Sum_probs=38.2

Q ss_pred             CcEEEccccc-CCCccccccccccceEEecccccccccccchh--hhhhccch
Q psy15850        133 GQARAKFNFV-AQTHLELSLVKESPHKYVDSEVTLQYRRPVRN--EIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~-~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~--~l~e~~~~  182 (225)
                      ..++|+|+|. +..+.+|+|++||+|.++.. ...+||....+  .-..+++.
T Consensus         3 ~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~~~g~~G~~P~   54 (69)
T 1ruw_A            3 PKFEAAYDFPGSGSSSELPLKKGDIVFISRD-EPSGWSLAKLLDGSKEGWVPT   54 (69)
T ss_dssp             SEEEESSCBCCCSCTTBCCBCTTCEEEEEEE-CTTSEEEEEETTSSCEEEEEG
T ss_pred             cEEEEccccCCCCCCCcccCCCCCEEEEEEe-cCCCeEEEEECCCCCEEEEeh
Confidence            4589999996 99999999999999999987 46778865544  44455544

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.67  E-value=1.6e-05  Score=53.80  Aligned_cols=50  Identities=8%  Similarity=0.125  Sum_probs=39.0

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchh-hhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN-EIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~-~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++......+||..... .-..+++.
T Consensus        14 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~   64 (78)
T 2dl5_A           14 LTCKVVYSYKASQPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPE   64 (78)
T ss_dssp             EEEEECSCBCCCSTTBCCBCSSEEEEEEECCSSSSEEEEECTTCCEEEEET
T ss_pred             cEEEEceeECCCCCCCCCCCCCCEEEEEeccCCCCcEEEEeCCCCEEEEEh
Confidence            468999999999999999999999999998544778865443 44444444

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.67  E-value=1.9e-05  Score=53.23  Aligned_cols=50  Identities=16%  Similarity=0.219  Sum_probs=40.0

Q ss_pred             CcEEEcccccCC-CccccccccccceEEecccccccccccc-hhhhhhccch
Q psy15850        133 GQARAKFNFVAQ-THLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~-~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~  182 (225)
                      ..++|+|+|.+. .+++|+|++||+|.++......+||... ++.-..+++.
T Consensus        10 ~~~~al~dy~~~~~~~eLs~~~Gd~i~v~~~~~~~gW~~g~~~~g~~G~~P~   61 (77)
T 2enm_A           10 TKARVMYDFAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPT   61 (77)
T ss_dssp             EEEEESSCCCCCTTSSBCCCCTTCEEEEEESCCSSSEEEEECTTCCEEEEET
T ss_pred             cEEEECccCCCCCCCCeecCCCCCEEEEeEccCCCCeEEEEECCCCEEEeeh
Confidence            358999999999 9999999999999999875467888655 5555555544

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=97.66  E-value=2.3e-05  Score=52.21  Aligned_cols=49  Identities=10%  Similarity=0.194  Sum_probs=39.4

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+...++|+|++||+|.++.. ...+||....+.-..+++.
T Consensus         6 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~   54 (73)
T 3thk_A            6 ELVLALYDYQEKSPREVTMKKGDILTLLNS-TNKDWWKVEVNDRQGFVPA   54 (73)
T ss_dssp             CEEEECSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEG
T ss_pred             EEEEECcCCCcCCCCccCCCCCCEEEEEEC-CCCCeEEEEECCcEEEEeh
Confidence            468999999999999999999999999987 4577886655555555544

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=97.66  E-value=2.8e-05  Score=51.16  Aligned_cols=49  Identities=14%  Similarity=0.174  Sum_probs=39.2

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++..+  .+||... .+.-..+++.+
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~~~~~~g~~G~~P~~   57 (68)
T 1wxt_A            8 LKMQVLYEFEARNPRELTVVQGEKLEVLDHS--KRWWLVKNEAGRSGYIPSN   57 (68)
T ss_dssp             EEEEESSCBCCCSSSBCCBCTTCEEEEEECS--SSEEEEECTTSCEEEEEGG
T ss_pred             eEEEECceECCCCcCcCCCCCCCEEEEEEcC--CCEEEEEECCCCEEEEEhH
Confidence            4589999999999999999999999999883  6777654 56555555543

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=97.66  E-value=2.8e-05  Score=51.76  Aligned_cols=51  Identities=16%  Similarity=0.112  Sum_probs=39.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++.. ...+||....  +.-..+++.
T Consensus        14 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~~g~~G~~P~   66 (73)
T 3h0h_A           14 GVTLFVALYDYEAITEDDLSFHKGEKFQILNS-SEGDWWEARSLTTGETGYIPS   66 (73)
T ss_dssp             TTCEEEESSCBCCSSTTBCCBCTTCEEEEEEC-SSSSEEEEEETTTCCEEEEEG
T ss_pred             CCEEEEECccCCCCCCCcceEeCCCEEEEEEe-cCCCeEEEEECCCCCEEEEEH
Confidence            34568999999999999999999999999987 4567775443  555555544

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=97.66  E-value=1e-05  Score=53.73  Aligned_cols=49  Identities=20%  Similarity=0.221  Sum_probs=39.8

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhh-ccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKE-LISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e-~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-.. +++.
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~gG~~P~   56 (71)
T 1hsq_A            7 CAVKALFDYKAQREDELTFIKSAIIQNVEK-QEGGWWRGDYGGKKQLWFPS   56 (71)
T ss_dssp             SCCCCSSCCCCSSSSSCCCCTTCCCBSCCC-BTTTEECCBCSSSCSCCEET
T ss_pred             eEEEECCCCCcCCCCccCCCCCCEEEEEEe-cCCCEEEEEECCeEEeEECh
Confidence            457899999999999999999999999987 567888766665554 5554

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=97.66  E-value=2.6e-05  Score=51.81  Aligned_cols=51  Identities=12%  Similarity=0.044  Sum_probs=39.8

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccch---hhhh---hccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR---NEIK---ELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~---~~l~---e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.+ .. ...+||.+..   +.-.   .+++.+
T Consensus         9 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v-~~-~~~~Ww~g~~~~~~g~~~~~G~~P~~   65 (72)
T 2kgt_A            9 LGPKYVGLWDFKSRTDEELSFRAGDVFHV-AR-KEEQWWWATLLDEAGGAVAQGYVPHN   65 (72)
T ss_dssp             CCCEEECCTTCBCSSTTSCBCCTTCCEEE-EE-ECSSCEEEEEECTTSCEEEEEEECTT
T ss_pred             CCcEEEEcccCCCCCcCCcCCCCCCEEEE-ee-CCCCEEEEEEcCCCCCEeCCcEEcHh
Confidence            34578999999999999999999999999 65 5678886555   5555   555543

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=97.65  E-value=2e-05  Score=57.02  Aligned_cols=51  Identities=8%  Similarity=-0.069  Sum_probs=39.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccc--cccccchh--------hhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTL--QYRRPVRN--------EIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~--~~~f~~~~--------~l~e~~~~~  183 (225)
                      ..++|+|+|.+...++|+|++|++|.++......  .||.+.++        .-+.+++.+
T Consensus        23 ~~~~Alydy~a~~~~ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsn   83 (108)
T 1i1j_A           23 SMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSS   83 (108)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGG
T ss_pred             eEEEECCccCCCCCCccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchh
Confidence            4589999999999999999999999999873233  48876665        455666553

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=97.65  E-value=2e-05  Score=54.17  Aligned_cols=42  Identities=10%  Similarity=-0.037  Sum_probs=34.9

Q ss_pred             cCcEEEcccc-cCCCccccccccccceEEecccccccccccchh
Q psy15850        132 EGQARAKFNF-VAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN  174 (225)
Q Consensus       132 ~~~~~a~~~~-~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~  174 (225)
                      ...++|+|+| .+...++|+|++||+|.++.. ...+||.+.++
T Consensus        18 ~~~~~Alydy~~a~~~~eLsf~~GDiI~V~~~-~~~gWw~G~~~   60 (83)
T 2ke9_A           18 SLKVRALKDFWNLHDPTALNVRAGDVITVLEQ-HPDGRWKGHIH   60 (83)
T ss_dssp             CEEEEESSCBCCCSCTTBCCBCTTCEEEESCS-SCSSCEEEEEC
T ss_pred             CeEEEEccccCCCCCCCcccccCCCEEEEEEe-cCCCeEEEEEC
Confidence            3468999999 899999999999999999987 55678865543

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=97.64  E-value=2.6e-05  Score=52.02  Aligned_cols=50  Identities=20%  Similarity=0.167  Sum_probs=39.7

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccch---hhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR---NEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~---~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++..+  ++||.+..   +.-..+++.+
T Consensus        11 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~--~~W~~g~~~~~~g~~G~~P~~   63 (74)
T 2m0y_A           11 EKYGVAFYNYDARGADELSLQIGDTVHILETY--EGWYRGYTLRKKSKKGIFPAS   63 (74)
T ss_dssp             CSCEEECSEECCCSSSBCCEETTEEEEEEEBS--SSCEEEEESSCSSCCEEECGG
T ss_pred             CeEEEEceeeCCCCcCcccCCCCCEEEEEEcC--CCeEEEEECCCCCCEEEEehH
Confidence            45689999999999999999999999999873  67886544   4555565543

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.63  E-value=2.1e-05  Score=54.62  Aligned_cols=50  Identities=24%  Similarity=0.249  Sum_probs=40.8

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.+
T Consensus        18 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~gWw~g~~~g~~G~~P~~   67 (88)
T 2cub_A           18 MPAYVKFNYMAEREDELSLIKGTKVIVMEK-CSDGWWRGSYNGQVGWFPSN   67 (88)
T ss_dssp             EEEEESSCCCCCSTTBCCCCTTEEEEEEEE-CTTSEEEEEETTEEEEEEGG
T ss_pred             CEEEEccccCCCCCCCcCCCCCCEEEEEEc-cCCCeEEEEECCcEEEEehH
Confidence            468999999999999999999999999987 46788876666666666553

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=97.63  E-value=2.4e-05  Score=49.77  Aligned_cols=48  Identities=17%  Similarity=0.120  Sum_probs=37.4

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchh--hhhhccch
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN--EIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~--~l~e~~~~  182 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||.....  .-..+++.
T Consensus         3 ~~~al~d~~~~~~~eLs~~~Gd~i~v~~~-~~~gW~~g~~~~~g~~G~~P~   52 (59)
T 1yn8_A            3 RAVALYDFEPENDNELRLAEGDIVFISYK-HGQGWLVAENESGSKTGLVPE   52 (59)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEEE-EETTEEEEECTTSSCEEEEEG
T ss_pred             EEEECccCCCCCCCCcCCCCCCEEEEEEc-CCCCeEEEEECCCCCEEEEeh
Confidence            47899999999999999999999999887 56778865443  34444443

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=97.62  E-value=2.8e-05  Score=49.78  Aligned_cols=48  Identities=23%  Similarity=0.381  Sum_probs=38.1

Q ss_pred             cEEEcccccCCCccccccccccceEEeccccccccccc-chhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP-VRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~-~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..+++|+|++||+|.++..  ..+||.. ..+.-..+++.+
T Consensus         3 ~~~al~dy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~~~~~~g~~G~~P~~   51 (60)
T 1i07_A            3 YAKSKYDFVARNSSELSVMKDDVLEILDD--RRQWWKVRNASGDSGFVPNN   51 (60)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEECGG--GCCEEEEECTTSCEEEEEGG
T ss_pred             EEEECccCCCCCCCcccCCCCCEEEEEEc--CCCeEEEEECCCCEEEEEHH
Confidence            47899999999999999999999999987  6677754 345555555543

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=97.61  E-value=2.8e-05  Score=51.27  Aligned_cols=50  Identities=12%  Similarity=0.063  Sum_probs=40.0

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||...  .+.-..+++.
T Consensus         7 ~~~~~al~~y~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~~~g~~G~~P~   58 (70)
T 2cuc_A            7 GNMFVALHTYSAHRPEELDLQKGEGIRVLGK-YQDGWLKGLSLLTGRTGIFPS   58 (70)
T ss_dssp             SCCEECCSCBCCCSTTBCCBCTTCEEEEEEE-EETTEEEEEETTTCCEEEEEG
T ss_pred             CcEEEECeeECcCCCCcCCCCCCCEEEEEEe-cCCCeEEEEECCCCCEEEEch
Confidence            3468999999999999999999999999987 456788654  5655555554

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=97.58  E-value=4.3e-05  Score=53.47  Aligned_cols=51  Identities=22%  Similarity=0.182  Sum_probs=40.0

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccccc---ccccccchhhh-hhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT---LQYRRPVRNEI-KELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~---~~~~f~~~~~l-~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.....   .+||...++.- ..+++.
T Consensus        17 ~~~~~alydy~a~~~~eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~~~~~G~~P~   71 (93)
T 1wxu_A           17 HVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPA   71 (93)
T ss_dssp             BBCEEESSCBCCSSSSBCCBCSSCBCEECCTTTSCSCSSCEEEESSSSSCEEECS
T ss_pred             CEEEEECccCCCCCCCccCcCCCCEEEEEECCCCCCCCCcEEEEeCCcCEEEEeh
Confidence            3568999999999999999999999999987442   58886655544 455554

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=97.58  E-value=3.3e-05  Score=58.57  Aligned_cols=49  Identities=22%  Similarity=0.232  Sum_probs=38.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhcc
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELI  180 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~  180 (225)
                      ...++|+|+|.+..+++|+|++||+|.++......+||.+.++.-..++
T Consensus         5 ~~~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~~~~~gWw~g~~~g~~G~f   53 (142)
T 2kbt_A            5 FGTAKARYDFCARDRSELSLKEGDIIKILNKKGQQGWWRGEIYGRIGWF   53 (142)
T ss_dssp             CCEEEESSCCCCSSSSBCCCCTTCEEEEEECCCSSSEEEEEETTEEEEE
T ss_pred             CeEEEECCccCCCCCCcCCCCCCCEEEEEEecCCCCeEEEEECCeeEEe
Confidence            3568999999999999999999999999987446778855544444443

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=97.58  E-value=3.2e-05  Score=49.91  Aligned_cols=49  Identities=14%  Similarity=0.119  Sum_probs=37.8

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....  +.-..+++.
T Consensus         7 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~~~g~~G~~P~   57 (64)
T 4f14_A            7 RTYRAMYDYSAQDEDEVSFRDGDYIVNVQP-IDDGWMYGTVQRTGRTGMLPA   57 (64)
T ss_dssp             -CEEESSCBCCCSTTBCCBCTTCEEEEEEE-CSSSEEEEEETTTTEEEEEEG
T ss_pred             EEEEECeeeCCcCCCcCCCCCCCEEEEEEe-CCCCeEEEEECCCCCEEEEeH
Confidence            358999999999999999999999999887 4567775444  555555544

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=97.58  E-value=3.3e-05  Score=53.80  Aligned_cols=51  Identities=12%  Similarity=0.137  Sum_probs=40.3

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccc-ccccccccc-hhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYRRPV-RNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~f~~-~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++... ...+||... .+.-..+++.
T Consensus        17 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~   69 (91)
T 1wx6_A           17 LHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPK   69 (91)
T ss_dssp             CEEEEESSCCCCSSSSBCCCCTTCEEEEEECCSSCTTEEEEECTTCCEEEEEG
T ss_pred             cEEEEEeecCCcCCCCcccCCCCCEEEEEECCCCCCCcEEEEeCCCCEEEEch
Confidence            34689999999999999999999999999873 456788654 5555555554

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=97.54  E-value=1.8e-05  Score=52.84  Aligned_cols=47  Identities=13%  Similarity=0.134  Sum_probs=38.4

Q ss_pred             EEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        135 ARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       135 ~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ++|+|+|.+ .+++|+|++||+|.++.. .+.+||.+..+.-..+++.+
T Consensus         3 a~alydy~~-~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   49 (73)
T 2kxd_A            3 APPLPPYSA-GGREVTMKKGDILTLLNS-TNKDWWKVEVNDRQGFVPAA   49 (73)
T ss_dssp             CCCCCSSCC-CSCCCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             EEEeeeeCC-CCCEeeEcCCCEEEEEEe-cCCCEEEEEECCCEEEEehH
Confidence            678999998 899999999999999987 46788876666666666654

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.54  E-value=7.2e-06  Score=59.50  Aligned_cols=81  Identities=7%  Similarity=-0.063  Sum_probs=59.9

Q ss_pred             CCeEEEeeCCcEEeecCCCC-CCCc--------CCCCcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc---
Q psy15850        104 NAMIGLFPFNYVEIIPYDKI-RTAP--------KKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR---  169 (225)
Q Consensus       104 ~g~~G~~P~nyv~~~~~~~~-~~~~--------~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~---  169 (225)
                      +|+.|++|+||+..-..+|. ..++        .....|.|++|.+....+.+.||++.+..|+++.... .+| |.   
T Consensus         3 ~g~~G~ip~n~v~~~~~~Wyhg~isR~~Ae~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~   82 (111)
T 2eo3_A            3 SGSSGMSSARFDSSDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGD   82 (111)
T ss_dssp             CCCCCSCSCCCCTTCHHHHEEESCCHHHHHHHHSSCCTTCEEEEECSSSSSCEEEEEEETTEEEEEEEEEETTTEEEETT
T ss_pred             CCccccccccccccCCCCcccCCCCHHHHHHHhcCCCCceEEEEeecCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECC
Confidence            57899999999865544444 1111        2346799999999988889999999999887776532 222 32   


Q ss_pred             --ccchhhhhhccchhH
Q psy15850        170 --RPVRNEIKELISEEE  184 (225)
Q Consensus       170 --f~~~~~l~e~~~~~e  184 (225)
                        |.++.+|+++|..+.
T Consensus        83 ~~F~sl~~LV~~y~~~~   99 (111)
T 2eo3_A           83 QEFDHLPALLEFYKIHY   99 (111)
T ss_dssp             CCBSSHHHHHHHHTTSC
T ss_pred             cccCCHHHHHHHHhhCC
Confidence              899999999998754

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=97.53  E-value=4.1e-05  Score=52.84  Aligned_cols=49  Identities=18%  Similarity=0.216  Sum_probs=39.1

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++..  ..+||.+. ++.-..+++.+
T Consensus        32 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~~g~~G~~P~~   81 (86)
T 2jxb_A           32 VIVIAKWDYTAQQDQELDIKKNERLWLLDD--SKTWWRVRNAANRTGYVPSN   81 (86)
T ss_dssp             EEEEESSCCCCCSSSBCCCCTTEEEEEEEC--CSSEEEEECTTSCEEEEEGG
T ss_pred             eEEEECccCCCCCCCEeccCCCCEEEEEec--CCCeEEEEECCCCEEEeehH
Confidence            468999999999999999999999999986  45777654 45555565543

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=97.52  E-value=4.2e-05  Score=50.90  Aligned_cols=49  Identities=24%  Similarity=0.292  Sum_probs=38.7

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++..  ..+||... .+.-..+++.
T Consensus         7 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~~g~~G~~P~   56 (72)
T 2jw4_A            7 EVVVVAKFDYVAQQEQELDIKKNERLWLLDD--SKSWWRVRNSMNKTGFVPS   56 (72)
T ss_dssp             CEEEECSSCCCCSSTTSCCCCTTCEEEEEEC--SSSSEEEECTTSCEEEECT
T ss_pred             CeEEEECcCCCcCCCCcccCCCCCEEEEEEC--CCCEEEEEECCCCEEEEEh
Confidence            3468999999999999999999999999986  45777644 3555555554

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.52  E-value=3.3e-05  Score=52.41  Aligned_cols=41  Identities=17%  Similarity=0.063  Sum_probs=34.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN  174 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~  174 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||...++
T Consensus         8 ~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~gWw~g~~~   48 (80)
T 1ue9_A            8 EIAQVTSAYVASGSEQLSLAPGQLILILKK-NTSGWWQGELQ   48 (80)
T ss_dssp             EEEEECSCCCCCSTTBCCCCTTCEEEEEEE-CSSSEEEEEEC
T ss_pred             eEEEECcccCCCCCCCCCCCCCCEEEEEEe-cCCCcEEEEEC
Confidence            458999999999999999999999999987 45778865544

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=97.52  E-value=4.3e-05  Score=52.52  Aligned_cols=50  Identities=12%  Similarity=0.089  Sum_probs=39.3

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~~  183 (225)
                      ..++|+|+|.+...++|+|.+||+|.++.. ...+||.+..  +.-..+++.+
T Consensus         7 ~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~-~~~~Ww~g~~~~~g~~G~~P~~   58 (84)
T 4ag1_C            7 TLFVALYDYNATRWTDLSFHKGEKFQILEF-GPGDWWEARSLTTGETGYIPSN   58 (84)
T ss_dssp             CEEEESSCBCCSBTTBCCBCTTCEEEEEEC-CSSSEEEEEETTTCCEEEEEGG
T ss_pred             EEEEEcccCCCCCCCcccccCCCEEEEEEe-cCCCeEEEEECCCCCEEEEehH
Confidence            468999999999999999999999999987 4567775444  5555555543

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=97.51  E-value=6e-05  Score=52.53  Aligned_cols=52  Identities=19%  Similarity=0.158  Sum_probs=40.0

Q ss_pred             CcCcEEEcccccCCCcc-ccccccccceEEeccccc----ccccccch-hhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHL-ELSLVKESPHKYVDSEVT----LQYRRPVR-NEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~-els~~~g~~v~~~~~~~~----~~~~f~~~-~~l~e~~~~  182 (225)
                      ....++|+|+|.+..++ +|+|++||+|.++.....    .+||.+.. +.-..+++.
T Consensus        13 ~~~~~~alydy~~~~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~~~g~~G~~P~   70 (92)
T 1jqq_A           13 KLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPY   70 (92)
T ss_dssp             TCEEEEESSBBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEETTSCEEEEEG
T ss_pred             cCEEEEECccCCCCCCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEeCCCCEEEEeh
Confidence            34568999999999999 999999999999987432    37886554 555555554

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.50  E-value=4.1e-05  Score=50.48  Aligned_cols=50  Identities=14%  Similarity=0.075  Sum_probs=38.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||....  +.-..+++.
T Consensus         7 ~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~-~~~gW~~g~~~~~g~~G~~P~   58 (70)
T 2ct3_A            7 GTPYRAMYQYRPQNEDELELREGDRVDVMQQ-CDDGWFVGVSRRTQKFGTFPG   58 (70)
T ss_dssp             CEEEEESSCBCCSSTTBCCBCTTEEEEEEEE-CSSSCEEEEESSSCCEEEECT
T ss_pred             CcEEEECccCCcCCcCCccCCCCCEEEEEEE-CCCCEEEEEECCCCCEEEech
Confidence            3468999999999999999999999999987 4567775433  344455544

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.49  E-value=5.6e-05  Score=50.72  Aligned_cols=40  Identities=0%  Similarity=-0.107  Sum_probs=33.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR  173 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~  173 (225)
                      ...++|+|+|.+. +++|+|++||+|.++.. ...+||....
T Consensus        10 ~~~~~alydy~~~-~~eLs~~~Gd~i~vl~~-~~~gWw~g~~   49 (75)
T 2egc_A           10 KDVYVSIADYEGD-EETAGFQEGVSMEVLER-NPNGWWYCQI   49 (75)
T ss_dssp             CEEEEECSCBCCC-SSSCCBCTTCEEEECEE-CTTSEEEEEE
T ss_pred             CeEEEECCCcCCC-CCcCCCCCCCEEEEEEc-CCCCeEEEEe
Confidence            4568999999999 99999999999999987 4667776443

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=97.48  E-value=4.9e-05  Score=51.50  Aligned_cols=52  Identities=19%  Similarity=0.164  Sum_probs=39.9

Q ss_pred             cCcEEEcccccCCCcc-ccccccccceEEeccccc----ccccccch-hhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHL-ELSLVKESPHKYVDSEVT----LQYRRPVR-NEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~-els~~~g~~v~~~~~~~~----~~~~f~~~-~~l~e~~~~~  183 (225)
                      ...++|+|+|.+...+ +|+|++||+|.++.....    .+||.+.. +.-..+++.+
T Consensus        14 ~~~~~alydy~~~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~~g~~G~~P~~   71 (80)
T 2v1r_A           14 LEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYN   71 (80)
T ss_dssp             CEEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGG
T ss_pred             CEEEEECccCCCCCCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEeCCCCeEEEEHH
Confidence            3468999999999999 999999999999987432    37886554 5555555543

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=97.47  E-value=3.9e-05  Score=55.46  Aligned_cols=40  Identities=13%  Similarity=-0.018  Sum_probs=34.0

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN  174 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~  174 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||.+..+
T Consensus         7 ~~~Alydy~a~~~~ELsf~~Gd~i~vl~~-~~~~Ww~g~~~   46 (108)
T 2rqv_A            7 YAIVLYDFKAEKADELTTYVGENLFICAH-HNCEWFIAKPI   46 (108)
T ss_dssp             CEEESSCCCCCSSSBCCCCSSEEECCCCE-ETTTEEEECCS
T ss_pred             EEEECCCcCCCCCCcCCcCCCCEEEEeEe-cCCCEEEEEEC
Confidence            48999999999999999999999999987 56778854443

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=97.45  E-value=7.6e-07  Score=75.75  Aligned_cols=118  Identities=11%  Similarity=0.037  Sum_probs=71.9

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEE---EEecC-------------CCeEEEE--ECCeEEEee--CCcEEee---
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFV---RRQVD-------------KNWYEGE--HNAMIGLFP--FNYVEII---  118 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v---~~~~~-------------~~Ww~g~--~~g~~G~~P--~nyv~~~---  118 (225)
                      +.|||+|.+.    ..++|+|++||+..|   +...+             ..||.++  ..+..|.+|  .||+...   
T Consensus       106 l~aL~~~~~~----~~~eLsf~kgd~~~ier~ln~~~pdw~~l~k~rd~~~~wl~~~gl~~~~~~~~~~~~~~~~~~~~l  181 (302)
T 2y3a_B          106 IAEIHESRTK----LEQDLRAQASDNREIDKRMNSLKPDLMQLRKIRDQYLVWLTQKGARQRKINEWLGIKNETEDQYSL  181 (302)
T ss_dssp             HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCSCC--------------------------
T ss_pred             HHHHHhhhhc----chhhhhhhhhHHHhHHhhhccCChHHHHHhhcccchhHHHHhcCCCcccccccccccCCCCCcccc
Confidence            4599999998    788999999999988   33222             3467765  344544444  3444321   


Q ss_pred             -----------cCCCC-CCCc--------CCCCcCcEEEcccccCCCccccccccccceEEeccc-cccccc-------c
Q psy15850        119 -----------PYDKI-RTAP--------KKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYR-------R  170 (225)
Q Consensus       119 -----------~~~~~-~~~~--------~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~-------f  170 (225)
                                 ..+|+ +.++        .....|.|+++.+ ...+.+.||+..+..|+++... ...||.       |
T Consensus       182 ~~~~~~~~~l~~~~WyhG~IsR~eAE~lL~~~~~GtFLVR~S-s~~g~y~LSv~~~~~V~H~rI~~~~~g~~~~~~~~~F  260 (302)
T 2y3a_B          182 MEDEDALPHHEERTWYVGKINRTQAEEMLSGKRDGTFLIRES-SQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLY  260 (302)
T ss_dssp             ------CGGGSSTTTBCCSCCHHHHHHHHTTSCTTBEEBCCC-SSTTCEEEEEECSSSEEEEEEEEETTEEESBTTBCCC
T ss_pred             cccccccccccCCCccCCCCCHHHHHHHhcCCCCCcEEEEec-cCCCceEEEEEeCCeeEEEEEEECCCceEEeCCCCCC
Confidence                       12233 1111        2246799999999 8889999999999988877653 223332       8


Q ss_pred             cchhhhhhccchhH
Q psy15850        171 PVRNEIKELISEEE  184 (225)
Q Consensus       171 ~~~~~l~e~~~~~e  184 (225)
                      +++.+|++||..+.
T Consensus       261 ~SL~eLV~~Y~~~~  274 (302)
T 2y3a_B          261 GSLKELVLHYQHAS  274 (302)
T ss_dssp             SSHHHHHHTTSSSC
T ss_pred             CCHHHHHHHHHhCC
Confidence            89999999998754

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.45  E-value=0.00011  Score=49.75  Aligned_cols=50  Identities=2%  Similarity=-0.000  Sum_probs=37.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~  182 (225)
                      ....++|+|+|.+..+++|+|++||+|.++..  ..+||...  .+.-..+++.
T Consensus        16 ~~~~~~Alydy~a~~~~eLs~~~Gd~i~v~~~--~~~Ww~~~~~~~g~~G~~P~   67 (79)
T 2cud_A           16 DSDFLAVLSDYPSPDISPPIFRRGEKLRVISD--EGGWWKAISLSTGRESYIPG   67 (79)
T ss_dssp             CCCEEEESSCSSCTTTSCCSSCTTCEEEEEEE--ETTEEEEEETTTCCEEEEEG
T ss_pred             CCeEEEEccCCCCCCCCcCCCCCCCEEEEEec--CCCeEEEEECCCCCEEEeeH
Confidence            34568999999999999999999999999983  45677543  2344555554

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=97.45  E-value=3.5e-05  Score=51.99  Aligned_cols=52  Identities=17%  Similarity=0.220  Sum_probs=40.6

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+.+.++|+|++||+|.++.. ...+||... .+.-..++..+
T Consensus        19 ~~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~~~~~g~~G~~P~~   71 (77)
T 1awj_A           19 EETLVIALYDYQTNDPQELALRCDEEYYLLDS-SEIHWWRVQDKNGHEGYAPSS   71 (77)
T ss_dssp             SSSCCCCCCCBCCCCTTSCCBCSSSCCSCCCT-TSSSBCCCCCSSSCCCCCBST
T ss_pred             CceEEEECccCCCCCcCCcCCCCCCEEEEEEe-cCCCCEEEEECCCCEEEEehH
Confidence            33568999999999999999999999999987 456777654 46655665543

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=97.44  E-value=7.1e-05  Score=49.40  Aligned_cols=49  Identities=16%  Similarity=0.178  Sum_probs=37.5

Q ss_pred             CcEEEcccccCCCcc--ccccccccceEEeccccccccccc-chhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHL--ELSLVKESPHKYVDSEVTLQYRRP-VRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~--els~~~g~~v~~~~~~~~~~~~f~-~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..++  +|+|++||+|.++..  ..+||.+ ..+.-..+++.+
T Consensus         6 ~~~~alydy~~~~~~~~eLsf~~Gd~i~v~~~--~~~Ww~g~~~~g~~G~~P~~   57 (70)
T 2vkn_A            6 YKAKALYPYDADDDDAYEISFEQNEILQVSDI--EGRWWKARRANGETGIIPSN   57 (70)
T ss_dssp             EEEEESSCBCCCSSSTTBCCBCTTCEEEEECT--TSSEEEEECTTSCEEEEEGG
T ss_pred             EEEEECccCCCCCCCCCcccCCCCCEEEEEEc--CCCeEEEEECCCCEEEEehH
Confidence            358999999998765  999999999999875  5677765 356655666553

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=97.40  E-value=0.00012  Score=59.12  Aligned_cols=40  Identities=18%  Similarity=0.081  Sum_probs=34.3

Q ss_pred             CcEEEcccccCCCccccccccccceEEecc----cccccccccc
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDS----EVTLQYRRPV  172 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~----~~~~~~~f~~  172 (225)
                      ..++|+|+|.+...++|+|++||+|.|+..    ...+|||.+.
T Consensus       143 ~~~rALYdY~a~~~dELSf~~GDiI~Vl~~~~~~~~ddgWw~G~  186 (213)
T 1mv3_A          143 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGV  186 (213)
T ss_dssp             EEEEESSCBCCCSTTCCCBCSSCEEEECCCSCGGGSCTTEEEEE
T ss_pred             eEEEECCCcCCCCCCcCCcCCCCEEEEeecCCCCccCCCeeEEE
Confidence            368999999999999999999999999982    3567888655

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.39  E-value=7.4e-05  Score=49.07  Aligned_cols=48  Identities=17%  Similarity=0.250  Sum_probs=37.9

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~  182 (225)
                      ..++|+|+|.+..+++|+|++||+|.++..+  .+||... .+.-..+++.
T Consensus         8 ~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~~~~~~g~~G~~P~   56 (68)
T 1wxb_A            8 KYVKILYDFTARNANELSVLKDEVLEVLEDG--RQWWKLRSRSGQAGYVPC   56 (68)
T ss_dssp             CCEECSSCBCCSSSSBCCBCTTCEEEEEECS--SSEEEEECTTSCEEEEET
T ss_pred             EEEEECccCCCCCCCccCCCCCCEEEEEEcC--CCEEEEEECCCCEEEEEH
Confidence            4589999999999999999999999999873  6777543 4555555554

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=97.39  E-value=0.00013  Score=52.42  Aligned_cols=52  Identities=13%  Similarity=0.146  Sum_probs=40.8

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..+++|+|++||+|.++... ..+||...  .+.-..+++.+
T Consensus        26 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~~~g~~G~~P~~   79 (109)
T 2yt6_A           26 GVTIFVALYDYEARTTEDLSFKKGERFQIINNT-EGDWWEARSIATGKSGYIPSN   79 (109)
T ss_dssp             SCCEEEESSCCCCSSTTSCCCCTTCEEEEEECS-CTTCEEEEESSSCCEEEECTT
T ss_pred             CCEEEEECccCCCCCCCccCCCCCCEEEEEEcc-CCCcEEEEECCCCCEEEechH
Confidence            345789999999999999999999999999874 66777543  45555665554

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=97.38  E-value=5.7e-05  Score=55.47  Aligned_cols=49  Identities=14%  Similarity=0.154  Sum_probs=39.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccch---hhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR---NEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~---~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++..+  ++||.+.+   +....+++.+
T Consensus        60 ~~~~Alydy~a~~~~eLsf~~Gd~i~vl~~~--~gWw~g~~~~~~g~~G~fP~n  111 (119)
T 2rqr_A           60 RHGVAIYNFQGSGAPQLSLQIGDVVRIQETC--GDWYRGYLIKHKMLQGIFPKS  111 (119)
T ss_dssp             EEEEBCSCBCCCSTTBCCBCTTCEEEEEEEE--TTEEEEEESSCTTCEEEEEGG
T ss_pred             eEEEEccccCCCCCCcccCcCCCEEEEEEcC--CCEEEEEECCCCCCEEEeChh
Confidence            4589999999999999999999999999873  58887655   5555555553

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=97.28  E-value=0.00035  Score=58.22  Aligned_cols=45  Identities=13%  Similarity=0.116  Sum_probs=36.0

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKE  178 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e  178 (225)
                      +.++|+|+|.+.++++|+|++||+|.++.. ...|||.+..++-.+
T Consensus         3 ~~~~a~~~~~~~~~~el~~~~gd~i~v~~~-~~~~w~~~~~~g~~G   47 (283)
T 3jv3_A            3 CQVIGMYDYTAQNDDELAFSKGQIINVLNK-EDPDWWKGEVSGQVG   47 (283)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEC-CSTTEEEEEETTEEE
T ss_pred             eEEEEccccCCCCCCcCCCCCCCEEEEEec-CCCCEEEEEECCCCC
Confidence            468999999999999999999999999987 456787544443333

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=97.24  E-value=0.0001  Score=51.33  Aligned_cols=30  Identities=20%  Similarity=0.110  Sum_probs=27.3

Q ss_pred             cCcEEEcccccCCCccccccccccceEEec
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVD  161 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~  161 (225)
                      ...++|+|+|.+..++||+|++||+|.++.
T Consensus        11 ~~~~~Alydy~a~~~~ELsf~~GD~I~V~~   40 (90)
T 3o5z_A           11 GFQYRALYPFRRERPEDLELLPGDVLVVSR   40 (90)
T ss_dssp             EEEEEECSCBCCCSTTBCCBCTTCEEEEEH
T ss_pred             CcEEEEeeeECCCCCCccCCcCCCEEEEEe
Confidence            346899999999999999999999999985

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=97.22  E-value=0.00016  Score=50.07  Aligned_cols=48  Identities=13%  Similarity=0.149  Sum_probs=36.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~  182 (225)
                      ..++|+|+|.+...++|+|.+||+|.++..  ..+||.+..  +.-..+++.
T Consensus         4 ~~~~Alydy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~~~g~~G~~P~   53 (90)
T 3reb_B            4 IIVVALYDYVSWSPDDLSFQKGDQMVVLEE--SGEWWKARSLATRKEGYIPS   53 (90)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEC--SSSEEEEEETTTCCEEEEEG
T ss_pred             EEEEECCccCcCCcCcCCCCCCCEEEEEEe--CCCEEEEEECCCCCEEEEeh
Confidence            358999999999999999999999999987  356775443  444444443

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=97.21  E-value=0.00012  Score=50.08  Aligned_cols=51  Identities=8%  Similarity=0.026  Sum_probs=38.3

Q ss_pred             CcEEEcccccCCCccccccccccceEEeccc--------------cccccccc--chhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSE--------------VTLQYRRP--VRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~--------------~~~~~~f~--~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+...++|+|++||+|.++...              ...+||.+  ..+.-..+++.+
T Consensus         6 ~~~~Alydy~~~~~~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~   72 (83)
T 3i5r_A            6 YQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGT   72 (83)
T ss_dssp             EEEEECSCBCCCSTTBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGG
T ss_pred             cEEEEccccCCCCCCccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehH
Confidence            4589999999999999999999999999531              22378865  445555555543

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=97.18  E-value=0.00028  Score=46.35  Aligned_cols=42  Identities=7%  Similarity=-0.080  Sum_probs=31.0

Q ss_pred             cCCCccccccccccceEEeccccccccccc--chhhhhhccchh
Q psy15850        142 VAQTHLELSLVKESPHKYVDSEVTLQYRRP--VRNEIKELISEE  183 (225)
Q Consensus       142 ~~~~~~els~~~g~~v~~~~~~~~~~~~f~--~~~~l~e~~~~~  183 (225)
                      .+.+.++|+|++||+|.++......+||.+  .++.-..+++.+
T Consensus        20 ~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~fP~~   63 (70)
T 1gcq_C           20 PGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCN   63 (70)
T ss_dssp             GGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGG
T ss_pred             CCCCCCcCCcCCCCEEEEEeCCCCCCCeEEEeCCCCCEeEeehH
Confidence            333445999999999999997557788876  666666666553

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=97.15  E-value=0.00019  Score=52.72  Aligned_cols=37  Identities=14%  Similarity=0.102  Sum_probs=32.6

Q ss_pred             cEEEcccccCCCccccccccccceEEeccccccccccc
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP  171 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~  171 (225)
                      .++|+|+|.+..+++|+|++||+|.++.. ...+||.+
T Consensus         5 ~~~Alydy~a~~~~ELsf~~Gd~i~vl~~-~~~~Ww~g   41 (120)
T 2kym_A            5 FAVTLYEFKAERDDELDVSPGENLSICAH-YDYEWFIA   41 (120)
T ss_dssp             EEEECSCBCCCSTTCCCBCTTCEEEEEEE-ETTTEEEE
T ss_pred             EEEEcccCCCCCCCccCCCCCCEEEEEEe-cCCCEEEE
Confidence            47899999999999999999999999987 56677754

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=96.96  E-value=0.00034  Score=54.50  Aligned_cols=49  Identities=8%  Similarity=0.121  Sum_probs=37.0

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~  182 (225)
                      ...++|+|+|.+..+++|+|++||++.++..  ..+||....  +.-..+++.
T Consensus        12 ~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~~~~~~~g~~G~vP~   62 (175)
T 4d8k_A           12 DNLVIALHSYEPSHDGDLGFEKGEQLRILEQ--SGEWWKAQSLTTGQEGFIPF   62 (175)
T ss_dssp             -CEEEESSCBCCCSSSBCCBCTTCEEEEEEC--CSSEEEEEETTTCCEEEEEG
T ss_pred             CcEEEEccCcCCcCCcccccccCCEEEEEcc--CCCEEEEEECCCCceeeecc
Confidence            4579999999999999999999999999987  356774332  344444444

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=96.95  E-value=0.00037  Score=54.20  Aligned_cols=51  Identities=8%  Similarity=0.143  Sum_probs=40.9

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ...+||.+. .+.-..+++.+
T Consensus       118 ~~~~~alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~~g~~G~~P~n  169 (174)
T 3qwx_X          118 IEVVVGTFKFTGERETDLPFEQGERLEILSK-TNQDWWEARNALGTTGLVPAN  169 (174)
T ss_dssp             SEEEEESSCBCCSSTTBCCBCTTCEEEEEEC-CSSSEEEEECTTCCEEEEEGG
T ss_pred             ccEEEEecCcccCCCCccccccCCEEEEEEc-cCCCeEEEEECCCCEEEEChH
Confidence            3468999999999999999999999999987 467788655 46656666543

>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.89  E-value=5.8e-05  Score=56.04  Aligned_cols=86  Identities=9%  Similarity=0.017  Sum_probs=58.2

Q ss_pred             cCCCeEEEEECCeEEEeeCCcEEeec----CCCCCC-CcCCC-CcCcEEEcccccCCCccccccccc--cceEEeccccc
Q psy15850         94 VDKNWYEGEHNAMIGLFPFNYVEIIP----YDKIRT-APKKL-SEGQARAKFNFVAQTHLELSLVKE--SPHKYVDSEVT  165 (225)
Q Consensus        94 ~~~~Ww~g~~~g~~G~~P~nyv~~~~----~~~~~~-~~~~~-~~~~~~a~~~~~~~~~~els~~~g--~~v~~~~~~~~  165 (225)
                      ++.+||+.      +++|+|||....    .+|.-. +.... ..|.|++|.+. ..+.+.|||+.+  +.|+++.....
T Consensus         6 ~~~~~~~~------~~iPsnyv~~~~~l~~~~Wyh~Ll~~g~~~dG~FLVR~S~-~~g~y~LSv~~~~~~~vkH~rI~~~   78 (126)
T 2cr4_A            6 SGEDYEKV------PLPNSVFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSS-TKSGKVLVVWDETSNKVRNYRIFEK   78 (126)
T ss_dssp             CCCCCCSC------SSCTTTBCSCCCHHHHHHHHHHHSTTSCCCTTCEEEEECS-STTCEEEEEEETTTTEECCEECEEE
T ss_pred             CCCCeEEc------CCCCHhhcCcccccccCCCHHHHhhCCCCCCCeEEEEecC-CCCCEEEEEEeCCCCCEEEEEEEEC
Confidence            35578765      679999997542    122211 11112 24999999998 889999999998  77766654322


Q ss_pred             -ccc------cccchhhhhhccchhHHH
Q psy15850        166 -LQY------RRPVRNEIKELISEEELA  186 (225)
Q Consensus       166 -~~~------~f~~~~~l~e~~~~~e~~  186 (225)
                       ++|      .|.++.+|++||..+.+.
T Consensus        79 ~~~~~i~~~~~F~sL~eLV~hY~~~~l~  106 (126)
T 2cr4_A           79 DSKFYLEGEVLFVSVGSMVEHYHTHVLP  106 (126)
T ss_dssp             TTEEESSSSCEESSHHHHHHHHTTSCCS
T ss_pred             CCeEEEcCCccCCCHHHHHHHHhhCCcC
Confidence             122      289999999999986543

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=96.89  E-value=8.5e-05  Score=66.78  Aligned_cols=86  Identities=8%  Similarity=-0.105  Sum_probs=61.3

Q ss_pred             ecCCCeEEEEE--CCeEEEeeCCcEEee---cCCCC------CCCcC-------CCCcCcEEEcccccCCCccccccccc
Q psy15850         93 QVDKNWYEGEH--NAMIGLFPFNYVEII---PYDKI------RTAPK-------KLSEGQARAKFNFVAQTHLELSLVKE  154 (225)
Q Consensus        93 ~~~~~Ww~g~~--~g~~G~~P~nyv~~~---~~~~~------~~~~~-------~~~~~~~~a~~~~~~~~~~els~~~g  154 (225)
                      ..+.+||+++.  .|..|++|+|||...   ..+|+      +.++.       ....|.|++|.+....+.+.||++.+
T Consensus        14 ~~~~~ww~~~~~~~~~~g~~P~~~v~~~~~~~~~wy~~~w~hg~i~r~~ae~lL~~~~G~FLvR~S~~~~g~~~Lsv~~~   93 (463)
T 3cxl_A           14 LYFQGVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREFHGMISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFG   93 (463)
T ss_dssp             ----CCSCCHHHHHHHHSCCCEECCCCCCCTTCCTTCCTTBCCSCCHHHHHHHHTTSTTEEEEEECSSSTTCEEEEEECS
T ss_pred             CCCCCEEEEEecCcCccCCCCcCccCCccccCCCCccccccccCCCHHHHHHHHcCCCCeEEEeccCCCCCCEEEEEEEC
Confidence            34678999984  468999999999754   23444      11211       12479999999999999999999999


Q ss_pred             cceEEeccccccccc-----ccchhhhhh
Q psy15850        155 SPHKYVDSEVTLQYR-----RPVRNEIKE  178 (225)
Q Consensus       155 ~~v~~~~~~~~~~~~-----f~~~~~l~e  178 (225)
                      +.|+++....++.|.     |.++.+|++
T Consensus        94 ~~v~H~~I~~~g~~~~~~~~F~sl~~Lv~  122 (463)
T 3cxl_A           94 SQTRNFRLYYDGKHFVGEKRFESIHDLVT  122 (463)
T ss_dssp             SSEEEEECEESSSEESSSCCBSCHHHHHH
T ss_pred             CEEEEEEEecCCeEEECCCccCCHHHHHH
Confidence            999887764333333     789999999

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=96.78  E-value=0.00074  Score=45.33  Aligned_cols=46  Identities=7%  Similarity=-0.079  Sum_probs=32.4

Q ss_pred             EcccccCC---CccccccccccceEEecccccccccccc--hhhhhhccch
Q psy15850        137 AKFNFVAQ---THLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISE  182 (225)
Q Consensus       137 a~~~~~~~---~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~  182 (225)
                      +.++|.++   ..++|+|++||+|.++......+||.+.  .+.-..+++.
T Consensus        20 a~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~   70 (78)
T 1k1z_A           20 EYYGIPPPPGAFGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPC   70 (78)
T ss_dssp             CBSSCSCCSSSSCCCCCBCTTCEEEEEECCSSCSCEEEEETTTTEEEEECS
T ss_pred             ECCCCCCCCCCCCCccCCCCCCEEEEEEcCCCCCeEEEEECCCCCEEEEeh
Confidence            44455553   2589999999999999985577888655  4555555554

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=96.67  E-value=0.00043  Score=56.40  Aligned_cols=51  Identities=18%  Similarity=0.196  Sum_probs=40.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccc-hhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV-RNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~-~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..+++|+|++||+|.++.. ..++||.+. .+.-..+++.+
T Consensus       136 ~~~~~al~dy~~~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~~g~~G~~P~~  187 (230)
T 2dvj_A          136 AEYVRALFDFNGNDEEDLPFKKGDILRIRDK-PEEQWWNAEDSEGKRGMIPVP  187 (230)
T ss_dssp             CCCCBCCSCCCCSSSSSCCCCSSCBCCCCBC-SCSSEEEEECTTSCEEEEEGG
T ss_pred             ceeEEEeeeecCCCCCCccCcCCCEEEEEEc-cCCCcEEEEeCCCCEEEEehH
Confidence            3468999999999999999999999999987 457777654 56555565553

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=96.57  E-value=0.0022  Score=57.27  Aligned_cols=41  Identities=15%  Similarity=0.079  Sum_probs=34.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR  173 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~  173 (225)
                      ...++|+|+|.+.++++|+|++||+|.++.. ..++||.+..
T Consensus        30 ~~~~~al~~~~~~~~~eL~~~~gd~i~v~~~-~~~~Ww~g~~   70 (466)
T 2pz1_A           30 VVCAEALWDHVTMDDQELGFKAGDVIEVMDA-TNREWWWGRV   70 (466)
T ss_dssp             CEEEEESSCBCCCCTTBCCBCTTCEEEEEEC-CSSSEEEEEE
T ss_pred             ccEEEEccccCCCCCCcCCCCCCCEEEEEEe-cCCCEEEEEE
Confidence            3468999999999999999999999999987 5677774443

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=96.53  E-value=0.0011  Score=45.15  Aligned_cols=38  Identities=13%  Similarity=0.059  Sum_probs=31.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccc-cccccc
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYRR  170 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~f  170 (225)
                      ..+.|+|+|.+....||+|++|+.+++++... ..+||.
T Consensus        18 e~~valydF~Ar~~~ELS~~kGd~vevle~~~~~peW~l   56 (82)
T 1u3o_A           18 ELTVVLQDFSAAHSSELSIQVGQTVELLERPSERPGWCL   56 (82)
T ss_dssp             EEEECSSCBCCCSTTCCCBCTTCEEEESSCTTSSTTEEE
T ss_pred             eEEEEEeeecCCCCCeeeEcCCCEEEEEecCCCCCCEEE
Confidence            35789999999999999999999999998742 356664

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=96.51  E-value=0.0013  Score=58.29  Aligned_cols=53  Identities=17%  Similarity=0.228  Sum_probs=39.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchh-hhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN-EIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~-~l~e~~~~~  183 (225)
                      ....++|+|+|.+..++||+|++||++.++......+||.+..+ +-..+++.+
T Consensus        10 ~~~~~~aly~~~~~~~~el~~~~gd~i~v~~~~~~~~ww~~~~~~g~~G~~P~~   63 (450)
T 1k9a_A           10 SGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPAN   63 (450)
T ss_dssp             TTCEEEESSCBCCSSSSBCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGG
T ss_pred             CCCEEEECCCcCccCCCcCCCCCCCEEEEeeccCCCCceEEEECCCceeeechh
Confidence            34568999999999999999999999999987555667754433 444454443

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=96.33  E-value=0.0017  Score=51.12  Aligned_cols=39  Identities=21%  Similarity=0.203  Sum_probs=32.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccc
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV  172 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~  172 (225)
                      ...++|+|+|.+..+++|+|++||+|.++... . +||.+.
T Consensus        17 ~~~~~Alydf~~~~~~eLs~~~Gd~i~v~~~~-~-~W~~g~   55 (184)
T 3a98_A           17 ERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC-G-DWYRGY   55 (184)
T ss_dssp             CCEEEESSCBCCSSTTBCCBCTTCEEEEEEEE-T-TEEEEE
T ss_pred             ceEEEEeeeeCCCCCCCCCcCCCCEEEEEecC-C-CEEEEE
Confidence            45689999999999999999999999999873 3 477544

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=96.32  E-value=0.0015  Score=58.71  Aligned_cols=51  Identities=14%  Similarity=0.142  Sum_probs=39.6

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||++.++......+||....+.-..+++.+
T Consensus        44 ~~~~alyd~~~~~~~els~~~gd~~~v~~~~~~~~w~~~~~~~~~G~~P~~   94 (495)
T 1opk_A           44 NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSN   94 (495)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEEECTTSSEEEEECSSCEEEEEGG
T ss_pred             cEEEEeCCcCCCCCCCCCccCCCEEEEeecCCCCCceeeeecCCcceeccc
Confidence            458999999999999999999999999987546788855444444444443

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=96.31  E-value=0.0013  Score=49.27  Aligned_cols=81  Identities=17%  Similarity=0.213  Sum_probs=57.1

Q ss_pred             cCCCeEEEEECCeEEEeeCCcEEeecCCCCC-CCc--------CCCCcCcEEEcccccCCCccccccccccceEEecccc
Q psy15850         94 VDKNWYEGEHNAMIGLFPFNYVEIIPYDKIR-TAP--------KKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV  164 (225)
Q Consensus        94 ~~~~Ww~g~~~g~~G~~P~nyv~~~~~~~~~-~~~--------~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~  164 (225)
                      .+.+||.+       + |.++   ...+|+- .++        .....|.|++|.+....+.+.|+++.++.|+++....
T Consensus        11 ~~~~Ww~~-------~-p~~~---~~~~WyhG~isR~eAe~lL~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~   79 (138)
T 2crh_A           11 AEQNWWEG-------P-PQDL---SVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMT   79 (138)
T ss_dssp             CCCCCSCC-------C-SSCG---GGSSSBCCSCCHHHHHHHTTTSCTTEEEEECCSSTTCCCEEEEEETTEEEEEECEE
T ss_pred             CCCCEeee-------c-CCCC---CcCCcccCCCCHHHHHHHhcCCCCCEEEEEECCCCCCCEEEEEEECCeEEEEEEEe
Confidence            35689988       4 7776   2334441 111        1235799999999888899999999999887776533


Q ss_pred             ccc-cc------ccchhhhhhccchhHH
Q psy15850        165 TLQ-YR------RPVRNEIKELISEEEL  185 (225)
Q Consensus       165 ~~~-~~------f~~~~~l~e~~~~~e~  185 (225)
                      .+| |.      |.++.+|++||..+.+
T Consensus        80 ~~g~~~l~~~~~F~sl~eLV~~y~~~~l  107 (138)
T 2crh_A           80 AEGLYRITEKKAFRGLTELVEFYQQNSL  107 (138)
T ss_dssp             ETTEEESSTTCCBSSHHHHHHHHTTSCG
T ss_pred             CCCEEEECCCCccCCHHHHHHHHHhCcc
Confidence            333 22      7899999999988654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=96.25  E-value=0.0017  Score=58.95  Aligned_cols=53  Identities=13%  Similarity=0.131  Sum_probs=40.2

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccchhHH
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISEEEL  185 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~~e~  185 (225)
                      ...++|+|+|.+..++||+|++||+|.++.. ..++||.+..  +.-..+++.+.+
T Consensus        85 ~~~~~alyd~~~~~~~el~~~~gd~i~v~~~-~~~~ww~~~~~~~g~~G~~P~~yv  139 (535)
T 2h8h_A           85 VTTFVALYDYESRTETDLSFKKGERLQIVNN-TEGDWWLAHSLSTGQTGYIPSNYV  139 (535)
T ss_dssp             --CEEESSCBCCCSSSBCCBCTTCEEEEEEC-SSSSEEEEEETTTCCEEEEEGGGE
T ss_pred             CcEEEEccccCCcCCCcCCcCCCCEEEEEEe-cCCCceEEEECCCCcceEecchhh
Confidence            3468999999999999999999999999987 4677885544  455555555443

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=96.13  E-value=0.002  Score=57.18  Aligned_cols=51  Identities=14%  Similarity=0.156  Sum_probs=40.2

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccch--hhhhhccchhHH
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVR--NEIKELISEEEL  185 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~--~~l~e~~~~~e~  185 (225)
                      .++|+|+|.+..++||+|++||++.+++. ..++||.+..  +.-..+++.+.+
T Consensus         4 ~~~al~~~~~~~~~el~~~~gd~~~v~~~-~~~~ww~~~~~~~g~~G~~P~~yv   56 (452)
T 1fmk_A            4 TFVALYDYESRTETDLSFKKGERLQIVNN-TEGDWWLAHSLSTGQTGYIPSNYV   56 (452)
T ss_dssp             EEEESSCBCCCSSSBCCBCTTCEEEESCC-CSSSEEEEEETTTCCEEEEEGGGE
T ss_pred             EEEECCccCCCCCCCCCccCCCEEEEecc-CCCCceEEEEcCCCcccccCcccc
Confidence            58899999999999999999999999987 4677875444  555566665543

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=96.13  E-value=0.0023  Score=58.29  Aligned_cols=50  Identities=12%  Similarity=-0.003  Sum_probs=40.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~~  183 (225)
                      ..++|+|+|.++.++||+|++||+|.++.. ..+|||.+.  ++.-..+++.+
T Consensus       443 ~~~~aly~y~a~~~dELs~~~GD~i~v~~~-~~~gW~~G~~~~~g~~G~fPsn  494 (526)
T 2de0_X          443 HNQIAIYAHQPRTADEIPMEPGDIIGVAGN-HWDGYSKGVNRKLGRTGLYPSY  494 (526)
T ss_dssp             CEEEECSCBCCSSTTBCCBCTTCEEEEEEE-CSSSEEEEEETTTTEEEEEEGG
T ss_pred             cceEEeecCCCCCCCcCCcCCCCEEEEccc-cCCCeeEEEeCCCCCEEEECch
Confidence            468999999999999999999999999976 567888654  56666666654

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=95.84  E-value=0.003  Score=42.26  Aligned_cols=41  Identities=12%  Similarity=0.133  Sum_probs=31.4

Q ss_pred             CCCccccccccccceEEecccccccccccchhhhhhccchhH
Q psy15850        143 AQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEE  184 (225)
Q Consensus       143 ~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~e  184 (225)
                      +..+++|+|++||+|.++.. ...+||.+.++.-..+++.+.
T Consensus         2 a~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~y   42 (77)
T 2jmc_A            2 AMGPREVTMKKGDILTLLNS-TNKDWWKVEVNDRQGFVPAAY   42 (77)
T ss_dssp             CSSSCCCCCCTTCEEECCCC-CCSSCCCEEETTEEECCCGGG
T ss_pred             CcCCCccCCCCCCEEEEEEe-cCCCEEEEEECCcEEEEEeeE
Confidence            45678999999999999987 467888766666666666543

>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A

Probab=95.71  E-value=0.0025  Score=46.13  Aligned_cols=78  Identities=9%  Similarity=-0.100  Sum_probs=51.6

Q ss_pred             CeEEEeeCCcEEeecCCCCC-CCc------CCCCcCcEEEcccccCCCccccccccccceEEeccccccccc------cc
Q psy15850        105 AMIGLFPFNYVEIIPYDKIR-TAP------KKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYR------RP  171 (225)
Q Consensus       105 g~~G~~P~nyv~~~~~~~~~-~~~------~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~------f~  171 (225)
                      |+.|+||.+.-.....+|+- .++      .-...|.|++|.+.... .+.||++.++.|+++.....++++      |.
T Consensus         1 ~~~g~vp~~~~~l~~~~WyhG~isR~eAe~lL~~~G~FLVR~S~~~~-~y~LSv~~~~~v~H~~I~~~~g~~~~~~~~F~   79 (114)
T 1wqu_A            1 GSSGSSGEVQKPLHEQLWYHGAIPRAEVAELLVHSGDFLVRESQGKQ-EYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFP   79 (114)
T ss_dssp             CCCCCCCGGGSCGGGCTTEEESCCHHHHHTTCCSTTEEEEEECSSSC-CEEEEEEETTEEEEEECEECSSSEESSSCCBS
T ss_pred             CCccccCCcccccccCCcEeeCCCHHHHHHHhccCCeEEEEEcCCCC-CEEEEEEECCEEEEEEEEecCCEEEECCCCCC
Confidence            45566666544444444441 111      00146899999998777 899999999888877654333333      89


Q ss_pred             chhhhhhccchh
Q psy15850        172 VRNEIKELISEE  183 (225)
Q Consensus       172 ~~~~l~e~~~~~  183 (225)
                      ++.+|++||..+
T Consensus        80 sl~~LV~~y~~~   91 (114)
T 1wqu_A           80 SIPLLIDHLLST   91 (114)
T ss_dssp             SHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHC
Confidence            999999998864

>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A

Probab=95.61  E-value=0.029  Score=37.40  Aligned_cols=41  Identities=15%  Similarity=0.120  Sum_probs=34.9

Q ss_pred             cccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        79 eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      --.+.+|+.+.|+... .+|++.+.+|..||+...|+.....
T Consensus        26 i~~l~~G~~v~vl~~~-~~W~kV~~~g~~GwV~~~yl~~~~~   66 (76)
T 2kt8_A           26 IGSLSGNTKVTIVGEE-GAFYKIEYKGSHGYVAKEYIKDIKD   66 (76)
T ss_dssp             EEEECTTCEEEEEEEE-TTEEEEEETTEEEEEEGGGEEEEEC
T ss_pred             hEEECCCCEEEEEEEe-CCEEEEEECCEEEEEEhHHhCcCCC
Confidence            3467899999999874 6899999999999999999988654

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=95.60  E-value=0.002  Score=58.10  Aligned_cols=51  Identities=18%  Similarity=0.179  Sum_probs=0.0

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchh-hhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN-EIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~-~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|.+||+|.++......|||.+.++ +-..+++.+
T Consensus       429 ~~~~alydy~~~~~~eLsf~~Gd~i~vl~~~~~~~Ww~g~~~~g~~G~~P~n  480 (486)
T 3haj_A          429 VRVRALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPAN  480 (486)
T ss_dssp             ----------------------------------------------------
T ss_pred             eEEEEccccCCCCCCcCccCCCCEEEEEEecCCCCeeEEEeCCCCEEEEeHH
Confidence            458999999999999999999999999987555688876665 556666554

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=95.59  E-value=0.0064  Score=53.86  Aligned_cols=49  Identities=14%  Similarity=0.163  Sum_probs=37.9

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||++.++..+  ++||.+.  .+.-..+++.+
T Consensus         9 ~~~~al~~~~~~~~~el~~~~gd~~~v~~~~--~~W~~~~~~~~g~~G~~P~~   59 (454)
T 1qcf_A            9 IIVVALYDYEAIHHEDLSFQKGDQMVVLEES--GEWWKARSLATRKEGYIPSN   59 (454)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEECC--TTEEEEEETTTCCEEEEEGG
T ss_pred             eEEEECcccCCcCCCcCcccCCCEEEEEecC--CCCeEEEECCCCceEEecch
Confidence            4589999999999999999999999999873  6677544  45444454444

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=95.56  E-value=0.0099  Score=43.31  Aligned_cols=75  Identities=9%  Similarity=-0.103  Sum_probs=53.5

Q ss_pred             eeCCcEEeec----CCCCC-CCc----------CCCCcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc---
Q psy15850        110 FPFNYVEIIP----YDKIR-TAP----------KKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR---  169 (225)
Q Consensus       110 ~P~nyv~~~~----~~~~~-~~~----------~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~---  169 (225)
                      .|+|||....    .+|+- .++          .....|.|++|.+....+.+.||++.+..|+++.... .+| |.   
T Consensus         2 ~psnyv~~~~~l~~~~WyhG~isR~eAe~lL~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~   81 (121)
T 2dly_A            2 SSGSSGAEDRSLQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTR   81 (121)
T ss_dssp             CSCCCCCSSGGGGGCSSBCSSCCHHHHHHHHTSSSCCTTCEEEEECSSSSSCEEEEEESSSCEEEEEEEECSSSCEEEET
T ss_pred             CCccccccccccCcCCccccCCCHHHHHHHHhcCCCCCCEEEEEcCCCCCCceEEEEEECCeEEEEEEEEcCCCCEEECC
Confidence            4899998532    34441 111          1135699999999988899999999999998776543 233 32   


Q ss_pred             ---ccchhhhhhccchhH
Q psy15850        170 ---RPVRNEIKELISEEE  184 (225)
Q Consensus       170 ---f~~~~~l~e~~~~~e  184 (225)
                         |.++.+|++||..+.
T Consensus        82 ~~~F~sl~eLV~~y~~~~   99 (121)
T 2dly_A           82 RKVFSTLNEFVNYYTTTS   99 (121)
T ss_dssp             TEEESSHHHHHHHHTTCC
T ss_pred             CCccCCHHHHHHHHhhCC
Confidence               789999999998754

>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}

Probab=95.52  E-value=0.04  Score=36.42  Aligned_cols=41  Identities=22%  Similarity=0.452  Sum_probs=34.7

Q ss_pred             cccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        79 eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      --.+.+|+.+.|++.. .+|++.+.+|..||+.+.|+.....
T Consensus        24 i~~l~~G~~v~v~~~~-~~W~kV~~~g~~GwV~~~yl~~~~~   64 (74)
T 2krs_A           24 IGTLRNNDKVEIIKEV-DGWYEIRFNGKVGYASKSYITIVNE   64 (74)
T ss_dssp             EEEEETTCEEEEEEEE-TTEEEEEETTEEEEECSSSEEESSS
T ss_pred             HEEECCCCEEEEEEEe-CCEEEEEECCeEEEEEhHHcCCCCC
Confidence            4468889999999874 5799999999999999999987643

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=95.45  E-value=0.0038  Score=52.75  Aligned_cols=53  Identities=17%  Similarity=0.185  Sum_probs=40.0

Q ss_pred             EEEcccccCCCcc-----ccccccccceEEecccccccccccchh------hhhhccchhHHHHH
Q psy15850        135 ARAKFNFVAQTHL-----ELSLVKESPHKYVDSEVTLQYRRPVRN------EIKELISEEELARR  188 (225)
Q Consensus       135 ~~a~~~~~~~~~~-----els~~~g~~v~~~~~~~~~~~~f~~~~------~l~e~~~~~e~~~~  188 (225)
                      ++|+|+|.+..++     +|+|++||++.+++. ...+||...+.      .-..+++.+.+..+
T Consensus         4 vrAlydy~~~~~~~~p~~eLsf~~GDil~V~~~-~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~   67 (295)
T 1kjw_A            4 IRALFDYDKTKDCGFLSQALSFRFGDVLHVIDA-GDEEWWQARRVHSDSETDDIGFIPSKRRVER   67 (295)
T ss_dssp             EEESSCBCHHHHHCCCSSBCCBCTTCEEEEEEC-CSSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             EEEeeccCCCCCCCCCCcCCcCCCCCEEEEEEe-CCCCeEEEEECCCCCccCceeEeecHHHHHH
Confidence            6899999998888     999999999999987 45677754332      14577777665433

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=95.13  E-value=0.0065  Score=38.89  Aligned_cols=38  Identities=11%  Similarity=0.155  Sum_probs=28.9

Q ss_pred             CccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        145 THLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       145 ~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ++++|+|++||+|.++.. ...+||.+..+.-..+++.+
T Consensus         2 ~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   39 (63)
T 1tuc_A            2 GPREVTMKKGDILTLLNS-TNKDWWKVEVNDRQGFVPAA   39 (63)
T ss_dssp             CCCCCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             CccccCCCCCCEEEEEEe-cCCCEEEEEECCcEEEEeHH
Confidence            457899999999999987 45778866666666666554

>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}

Probab=95.02  E-value=0.013  Score=38.43  Aligned_cols=40  Identities=15%  Similarity=0.277  Sum_probs=33.6

Q ss_pred             ccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         80 LSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        80 Ls~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      -.+.+|+.+.|+.. ..+|++.+.+|..||+.+.|+....+
T Consensus        26 ~~l~~G~~v~v~~~-~~~W~~V~~~G~~GwV~~~~l~~~~~   65 (70)
T 2kq8_A           26 GALPQGQKVQVISE-NSGWSKINYNGQTGYIGTRYLSKLEH   65 (70)
T ss_dssp             CCCCSSSSCCCCEE-ETTEEEEEETTEEEEEETTSCSCCCS
T ss_pred             EEECCCCEEEEEEe-cCCEEEEEECCEEEEEEhHHccchhh
Confidence            45788999998876 46899999999999999999977653

>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide binding protein; HET: PTR; 1.80A {Mus musculus} SCOP: d.93.1.1 PDB: 1r1q_A* 1r1s_A*

Probab=94.12  E-value=0.022  Score=39.95  Aligned_cols=55  Identities=11%  Similarity=0.069  Sum_probs=44.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc--ccccc-----ccchhhhhhccchhHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQYR-----RPVRNEIKELISEEEL  185 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~~~-----f~~~~~l~e~~~~~e~  185 (225)
                      +.|.|+++.+....+.+.||++.++.|+++....  .+.|.     |+++.+|+++|..+.+
T Consensus        29 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l   90 (100)
T 1r1p_A           29 DIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSI   90 (100)
T ss_dssp             CTTBEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSSCEESSHHHHHHHHTTSCS
T ss_pred             CCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeCCEeCCHHHHHHHHHhCCC
Confidence            5799999999988889999999999998876532  22232     8999999999987654

>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*

Probab=93.64  E-value=0.045  Score=38.57  Aligned_cols=54  Identities=6%  Similarity=-0.104  Sum_probs=42.8

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccccc------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYR------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+....+.+.||+..++.|+++.....+|++      |.++.+|++||..+.
T Consensus        25 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~~~~~~F~sl~~LI~~y~~~~   84 (104)
T 1mil_A           25 LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNH   84 (104)
T ss_dssp             STTEEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHHHHHHHT
T ss_pred             cCCcEEEEeCCCCCCCEEEEEEECCEEEEEEEEeCCCEEEECCceeCCHHHHHHHHhhCC
Confidence            468999999988889999999999988877653333333      799999999988753

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=93.61  E-value=0.046  Score=46.85  Aligned_cols=52  Identities=8%  Similarity=-0.034  Sum_probs=37.7

Q ss_pred             cCcEEEcccccCCCcc-------ccccccccceEEecccccccccccch---hhhhhccchhH
Q psy15850        132 EGQARAKFNFVAQTHL-------ELSLVKESPHKYVDSEVTLQYRRPVR---NEIKELISEEE  184 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~-------els~~~g~~v~~~~~~~~~~~~f~~~---~~l~e~~~~~e  184 (225)
                      ...++|+|+|.+..+.       +|+|++||++.+++. .+.+||..-.   +.-..+++...
T Consensus        38 ~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~-~d~~WWqar~~~~~g~~GlIPS~~   99 (337)
T 4dey_A           38 AFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEK-FNNDWWIGRLVKEGCEIGFIPSPV   99 (337)
T ss_dssp             CEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEE-CSSSEEEEEESSTTCCCEEEECHH
T ss_pred             cEEEEEccccCCCCCCCCCcccccccccCCCEEEEEec-CCCCeEEEEECCCCCCccEecCHH
Confidence            3467899999998766       499999999999998 4455663222   23467777755

>3maz_A Signal-transducing adaptor protein 1; modular domain, phosphotyrosine, specificity, cytoplasm, phosphoprotein, SH2 domain, signaling protein; HET: PTR; 1.90A {Homo sapiens}

Probab=93.05  E-value=0.045  Score=40.20  Aligned_cols=54  Identities=13%  Similarity=0.075  Sum_probs=41.4

Q ss_pred             CCcCcEEEcccccCCCcccccccc---ccceEEeccc-cccccc--------ccchhhhhhccchhH
Q psy15850        130 LSEGQARAKFNFVAQTHLELSLVK---ESPHKYVDSE-VTLQYR--------RPVRNEIKELISEEE  184 (225)
Q Consensus       130 ~~~~~~~a~~~~~~~~~~els~~~---g~~v~~~~~~-~~~~~~--------f~~~~~l~e~~~~~e  184 (225)
                      +..|.|+++.+.... .+.||++.   |+.|+++... .+++|.        |+++++||+||.+.+
T Consensus        35 ~~~GaFLVR~Se~~~-~ySLSVR~~~~~~~VKHYkI~~~~G~y~I~~~~~~~F~SL~eLV~yY~~~a  100 (125)
T 3maz_A           35 PSLGNMILRPGSDSR-NYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVIDYFVKET  100 (125)
T ss_dssp             GGGCSEEEEECTTSS-SEEEEEEECSSSCEEEEEEEEEETTEEEECSSSCEEESSHHHHHHHHHHHT
T ss_pred             CCCCcEEEEeCCCCC-CEEEEEEecCCCCCEeeeEEEEeCCEEEEecCCCcCcCCHHHHHHHHHhCC
Confidence            346899999997665 89999997   7889888742 234443        899999999998754

>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain, protein protein interactions, PTR residues, HYDR peptide complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A* 1aya_A* 1ayb_A* 1ayc_A* 1ayd_A

Probab=92.88  E-value=0.056  Score=38.29  Aligned_cols=54  Identities=15%  Similarity=0.125  Sum_probs=42.6

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccc-cc------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQ-YR------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~-~~------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+....+.+.||+..+..|+++.....++ |.      |+++.+|++||..+.
T Consensus        28 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~   88 (109)
T 3tkz_A           28 VDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHH   88 (109)
T ss_dssp             CTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHHHST
T ss_pred             CCCEEEEEecCCCCCCEEEEEEECCEEEEEEEEeCCCEEEecCCcccCCHHHHHHHHHhCc
Confidence            4688999999888899999999999988776543333 31      789999999987643

>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*

Probab=92.82  E-value=0.043  Score=38.54  Aligned_cols=55  Identities=15%  Similarity=0.128  Sum_probs=42.8

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccc-ccc-----ccchhhhhhccchhHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTL-QYR-----RPVRNEIKELISEEEL  185 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~-~~~-----f~~~~~l~e~~~~~e~  185 (225)
                      ..|.|++|.+....+.+.||++.++.|+++.....+ +|.     |.++.+|+++|..+.+
T Consensus        26 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~F~sl~~LV~~y~~~~l   86 (102)
T 2cia_A           26 VEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVEHYKKAPI   86 (102)
T ss_dssp             CTTEEEEEECSSSTTCEEEEECCSSSCEEEEEEEETTEEEETTEEESSHHHHHHHHHHSCS
T ss_pred             CCcEEEEEECCCCCCCEEEEEEeCCeeEEEEEEecCCEEEECCcCcCCHHHHHHHHhhCcc
Confidence            568999999998888999999999888776553222 233     8999999999877543

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=92.66  E-value=0.019  Score=40.48  Aligned_cols=48  Identities=2%  Similarity=-0.071  Sum_probs=33.6

Q ss_pred             cEEEcccc--cCCCccccccccccceEEeccccccccc-ccchhhhhhccch
Q psy15850        134 QARAKFNF--VAQTHLELSLVKESPHKYVDSEVTLQYR-RPVRNEIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~--~~~~~~els~~~g~~v~~~~~~~~~~~~-f~~~~~l~e~~~~  182 (225)
                      .+.|+++|  ...+..+|+|++|+++++++...+ +|| ..-.+.-..|++.
T Consensus        41 ~~~a~~~f~~~k~g~~DLpfkkGE~LeVI~~~e~-~wwLcRNs~GkyGyVP~   91 (102)
T 1ri9_A           41 STKVTTSITSKKWGTRDLQVKPGESLEVIQTTDD-TKVLCRNEEGKYGYVLR   91 (102)
T ss_dssp             CCBCCTTSCSSCCCTTBCCCCTTCBCEEEEESSS-SEEEEEETTTEEEEEEG
T ss_pred             EEEEeeccccccCCcccCCcCCCCEEEEEEeCCC-CEEEEECCCCCCCceeH
Confidence            35677777  677889999999999999998555 555 3333444444444

>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.39  E-value=0.1  Score=37.61  Aligned_cols=54  Identities=9%  Similarity=-0.050  Sum_probs=42.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cccc------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQYR------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~~------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+....+.+.|++..+..|+++..... ++|.      |.++.+|++||..+.
T Consensus        36 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LV~~y~~~~   96 (118)
T 2dlz_A           36 ASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQCHS   96 (118)
T ss_dssp             CTTBEEEECCSCSSCCEEEEEECSSSEEEEEEEEETTEEESTTSCCBSSHHHHHHHHTTSC
T ss_pred             CCCEEEEEeCCCCCCCEEEEEEECCcEEEEEEEEcCCEEEEeCCcccCCHHHHHHHHhhCc
Confidence            46889999998888899999999998877654322 2222      889999999998764

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}

Probab=92.28  E-value=0.097  Score=44.36  Aligned_cols=53  Identities=15%  Similarity=0.183  Sum_probs=35.9

Q ss_pred             EEEcccccCCCccccccccccceEEecccccc--------cccccch------hhhhhccchhHHHH
Q psy15850        135 ARAKFNFVAQTHLELSLVKESPHKYVDSEVTL--------QYRRPVR------NEIKELISEEELAR  187 (225)
Q Consensus       135 ~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~--------~~~f~~~------~~l~e~~~~~e~~~  187 (225)
                      +.|+|+|.+..+.+|+|++||++.|++....+        |||...+      ..-..+++....+.
T Consensus         7 VRalfdy~~~~~~eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~ae   73 (308)
T 3kfv_A            7 IRTHFELEPSPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAE   73 (308)
T ss_dssp             EEECSCBCCCSSSBCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHH
T ss_pred             EEEecCcCCCCcccCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHH
Confidence            45999999999999999999999999874333        5874222      12456666655443

>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A

Probab=92.27  E-value=0.078  Score=37.33  Aligned_cols=53  Identities=6%  Similarity=-0.076  Sum_probs=41.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccc-cc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQ-YR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~-~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+....+.+.||+..+..|+++.....+| |.      |.++.+|++||..+
T Consensus        28 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~Lv~~y~~~   87 (106)
T 3eaz_A           28 ETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSD   87 (106)
T ss_dssp             CTTEEEEEECTTSTTCEEEEEEETTEEEEEECEEETTEEESSSSSCBSSHHHHHHHHHHC
T ss_pred             CCCEEEEEECCCCCCcEEEEEEeCCceEEEEEEecCCEEEECCCCccCCHHHHHHHHhhC
Confidence            5689999999888899999999999887776532222 22      78999999998764

>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=92.26  E-value=0.089  Score=36.65  Aligned_cols=54  Identities=7%  Similarity=-0.073  Sum_probs=42.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+....+.+.||+..+..|+++.... .+| |.      |.++.+|++||..+.
T Consensus        24 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~   85 (100)
T 1rja_A           24 ATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQS   85 (100)
T ss_dssp             SSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHHHHCC
T ss_pred             CCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCcEEECCCCccCCHHHHHHHHhhCC
Confidence            5789999999888889999999999887776532 223 32      789999999988754

>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics; NMR {Homo sapiens}

Probab=92.12  E-value=0.1  Score=37.70  Aligned_cols=54  Identities=4%  Similarity=-0.049  Sum_probs=42.2

Q ss_pred             CcCcEEEcccccCCCcccccccc----ccceEEeccccc-cccc------c--cchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVK----ESPHKYVDSEVT-LQYR------R--PVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~----g~~v~~~~~~~~-~~~~------f--~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+....+.+.||++.    +..|+++..... ++|.      |  +++.+|++||..+.
T Consensus        42 ~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~g~~~i~~~~~F~~~sL~eLV~~y~~~~  108 (118)
T 2el8_A           42 ECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHT  108 (118)
T ss_dssp             TTCSBEEEECCSSSSSEEEEECCCBTTBCCCEEECBCCBTTBCCBSSSSCCCCSSHHHHHHHHHHHS
T ss_pred             CCcEEEEeeCCCCCCceEEEEEEecCCCCcEEEEEEEEcCCEEEEeCCCeECCCCHHHHHHHHhhCC
Confidence            56889999998888899999998    888887755322 3332      8  99999999987653

>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}

Probab=92.04  E-value=0.085  Score=38.05  Aligned_cols=54  Identities=9%  Similarity=0.034  Sum_probs=42.3

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccc-cc-----ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQ-YR-----RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~-~~-----f~~~~~l~e~~~~~e  184 (225)
                      ..|.|++|.+....+.+.||+..++.|+.+.....+| |.     |+++.+|+++|..+.
T Consensus        35 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~g~y~~~~~~F~sl~eLV~~y~~~~   94 (116)
T 2kk6_A           35 KQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTGFSNIPQLIDHHYTTK   94 (116)
T ss_dssp             STTCEEEEECTTCTTCEEEEEEETTEEEEEEEEEETTEEESSSCEESCHHHHHHHHHHTT
T ss_pred             cCCcEEEEECCCCCCcEEEEEEECCeEEEEEEEecCCEEEECCCEeCCHHHHHHHHhhCC
Confidence            3588999999988889999999998887765533333 32     899999999998753

>1wfw_A Kalirin-9A; SH3 domain, neuron-specific GDP/GTP exchange factor, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.34.2.1

Probab=92.04  E-value=0.55  Score=30.50  Aligned_cols=50  Identities=16%  Similarity=0.177  Sum_probs=39.8

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE------CCeEEEeeCCcE
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH------NAMIGLFPFNYV  115 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~------~g~~G~~P~nyv  115 (225)
                      +....||.|.    .++|++...|+++.++.....+....-.      ....||+|..-+
T Consensus        10 m~V~~dY~A~----ke~eI~v~~ge~Vqila~nqqnm~Lv~~~a~~q~paaegWvPG~vL   65 (74)
T 1wfw_A           10 MTVIKDYYAL----KENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSIL   65 (74)
T ss_dssp             EECCSCBCCC----SSSCCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGGC
T ss_pred             EEEEeeeeee----ccceeccccCcEEEEEEecCcceEEEEeecCCCCccccCcccccEe
Confidence            5568899999    8999999999999999887777665542      236899997543

>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A

Probab=91.93  E-value=0.086  Score=36.51  Aligned_cols=53  Identities=8%  Similarity=-0.149  Sum_probs=41.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cccc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+....+.+.||+..+..|+++..... ++|.      |+++.+|+++|..+
T Consensus        25 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~~y~~~   84 (98)
T 3us4_A           25 EDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKD   84 (98)
T ss_dssp             CTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEETTEEESSSSSEESSHHHHHHHHHHC
T ss_pred             CCcEEEEEeCCCCCCcEEEEEEECCceEEEEEEEeCCEEEECCCCccCCHHHHHHHhhhC
Confidence            56899999998888999999999998877665322 2332      78999999998764

>1jyr_A Growth factor receptor-bound protein 2; receptor binding, regulatory, inhibitor, signaling protein-I complex; HET: PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A* 1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E* 1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*

Probab=91.72  E-value=0.082  Score=36.62  Aligned_cols=55  Identities=13%  Similarity=0.019  Sum_probs=44.3

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccc-ccc-cc-----ccchhhhhhccchhHHH
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR-----RPVRNEIKELISEEELA  186 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~-----f~~~~~l~e~~~~~e~~  186 (225)
                      .|.|+++.+....+.+.||+..++.|+++.... .+| |.     |+++.+|++||..+.+.
T Consensus        25 ~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~   86 (96)
T 1jyr_A           25 DGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVS   86 (96)
T ss_dssp             TTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHHHHTTSSCSC
T ss_pred             CcEEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEECCcccCCHHHHHHHHhhCCCC
Confidence            789999999888899999999999988876532 222 33     89999999999987654

>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain, phosphotyrosine binding, signaling protein, signaling protein-antagonist complex; HET: PTR; 1.60A {Homo sapiens} SCOP: d.93.1.1 PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A* 3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A* 2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A* 1fyr_A* ...

Probab=91.61  E-value=0.096  Score=37.75  Aligned_cols=58  Identities=14%  Similarity=0.052  Sum_probs=45.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc--ccccc-----ccchhhhhhccchhHHHHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQYR-----RPVRNEIKELISEEELARR  188 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~~~-----f~~~~~l~e~~~~~e~~~~  188 (225)
                      ..|.|++|.+....+.+.||++.++.|+.+....  ++.|.     |.++.+|++||..+.+.+.
T Consensus        27 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~eLV~~y~~~~l~~~   91 (117)
T 3ov1_A           27 HDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRN   91 (117)
T ss_dssp             STTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHHHHTTTSCSCSS
T ss_pred             CCCcEEEEeCCCCCCCEEEEEecCCceEEEEEEECCCCeEEECCCCcCCHHHHHHHHhhCCCCCC
Confidence            4689999999888899999999999988775532  22232     8999999999998775443

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=91.41  E-value=0.065  Score=50.08  Aligned_cols=51  Identities=10%  Similarity=-0.016  Sum_probs=37.7

Q ss_pred             CcEEEccccc---CCCccccccccccceEEeccc----ccccccccc--hhhhhhccchh
Q psy15850        133 GQARAKFNFV---AQTHLELSLVKESPHKYVDSE----VTLQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~---~~~~~els~~~g~~v~~~~~~----~~~~~~f~~--~~~l~e~~~~~  183 (225)
                      ..++|+++|.   ..+...|+|++||+|.+....    ..+|||++.  +++-..+++.+
T Consensus       574 ~~~~Al~d~~~~~~~~~~~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~~g~~G~fP~~  633 (655)
T 3pvl_A          574 KYVVALQDNPNPAGEESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTD  633 (655)
T ss_dssp             CEEEESSCCCC-----CCBCCCCTTCEEEESSCCHHHHHHSSEEEEEETTTCCEEEEEGG
T ss_pred             hhhhHHhhcccCCCCCCCcccccCCCEEEEccccCcccCCCCeEEEEeCCCCceEEeEhh
Confidence            4589999998   567788999999999998873    457899766  66666665543

>2lnw_A VAV-2, guanine nucleotide exchange factor VAV2; signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2lnx_A

Probab=91.26  E-value=0.083  Score=38.40  Aligned_cols=55  Identities=11%  Similarity=-0.025  Sum_probs=42.8

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cccc------ccchhhhhhccchhHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQYR------RPVRNEIKELISEEEL  185 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~~------f~~~~~l~e~~~~~e~  185 (225)
                      ..|.|+++.+....+.+.||+..+..|+.+..... ++|.      |.++.+|++||..+.+
T Consensus        42 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~l~~~~~F~sl~eLV~~y~~~~l  103 (122)
T 2lnw_A           42 ASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQCHSL  103 (122)
T ss_dssp             CTTBEEEEECCCSSEEEEEEEECSSCEEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHSCG
T ss_pred             CCCeEEEEeCCCCCCcEEEEEEeCCcEEEEEEEEcCCEEEECCCCeECCHHHHHHHHhhCcC
Confidence            46889999998888889999999998877654322 2332      8899999999987643

>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}

Probab=90.90  E-value=0.15  Score=37.01  Aligned_cols=54  Identities=7%  Similarity=0.007  Sum_probs=42.6

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccc-cc------ccchhhhhhccchhHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQ-YR------RPVRNEIKELISEEEL  185 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~-~~------f~~~~~l~e~~~~~e~  185 (225)
                      ..|.|++|.+. ..+.+.|+++.++.|+++.....++ |.      |.++.+|++||..+.+
T Consensus        40 ~~G~FLVR~S~-~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~  100 (124)
T 2eob_A           40 RDGAFLIRKRE-GTDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESLVELVSYYEKHAL  100 (124)
T ss_dssp             SSSEEEEECCT-TSSCEEEEEEETTEEEEEEEEESSSCEESSSSCCBSSHHHHHHHHTTSCS
T ss_pred             CCCEEEEEecC-CCCCEEEEEEeCCeEEEEEEEECCCEEEECCCCcCCCHHHHHHHHhhCCC
Confidence            46889999998 7889999999999887776543333 32      8999999999988653

>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A

Probab=90.81  E-value=0.098  Score=37.28  Aligned_cols=54  Identities=13%  Similarity=0.030  Sum_probs=41.6

Q ss_pred             CCcCcEEEcccccCCCccccccccccceEEeccc-cccccc-------ccchhhhhhccchhH
Q psy15850        130 LSEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYR-------RPVRNEIKELISEEE  184 (225)
Q Consensus       130 ~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~-------f~~~~~l~e~~~~~e  184 (225)
                      ...|.|+++.+ ...+.+.||+..+..|+++... ..++|.       |.++.+|++||..+.
T Consensus        29 ~~~G~FLVR~S-~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~   90 (112)
T 1h9o_A           29 KRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTS   90 (112)
T ss_dssp             CCTTEEEEEEC-SSTTCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHSC
T ss_pred             CCCceEEEeec-CCCCCEEEEEEECCEEEEEEEEEcCCceEEeCCCCCcCCHHHHHHHHhhCc
Confidence            36689999999 8888999999998888776543 223333       788999999987754

>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*

Probab=90.74  E-value=0.13  Score=36.59  Aligned_cols=57  Identities=9%  Similarity=-0.048  Sum_probs=44.6

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccccc------ccchhhhhhccchhHHHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYR------RPVRNEIKELISEEELAR  187 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~------f~~~~~l~e~~~~~e~~~  187 (225)
                      ..|.|+++.+....+.+.||++.+..|+++.... .+|++      |.++.+|++||..+.+..
T Consensus        32 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LV~~y~~~~l~~   95 (111)
T 2hdv_A           32 SHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLEHFRVHPIPL   95 (111)
T ss_dssp             GTTEEEEEECSSCTTEEEEEEEETTEEEEEEEEECTTCCEEETTEEESSHHHHHHHHTTSCCC-
T ss_pred             CCCeEEEEecCCCCCCEEEEEEeCCeEEEEEEEEcCCCCEEeCCceeCCHHHHHHHHhhCCccc
Confidence            5688999999888889999999999888776542 23332      899999999998876544

>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=90.30  E-value=0.17  Score=35.83  Aligned_cols=55  Identities=9%  Similarity=-0.087  Sum_probs=42.8

Q ss_pred             CCcCcEEEcccccCCCccccccccccceEEecccccc-------------------cc-----cccchhhhhhccchhH
Q psy15850        130 LSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTL-------------------QY-----RRPVRNEIKELISEEE  184 (225)
Q Consensus       130 ~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~-------------------~~-----~f~~~~~l~e~~~~~e  184 (225)
                      ...|.|+++.+....+.+.||++.++.|+++.....+                   .|     .|.++.+|++||..+.
T Consensus        19 ~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~g~~~~~~~l~~~~F~sl~~LV~~y~~~~   97 (109)
T 1ju5_A           19 QRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHY   97 (109)
T ss_dssp             CCTTEEEEEECSSSTTEEEEEEECSSCEEEEEEECCSSSSCCCCCCSSCCTTCCCCCEEETTEEESSHHHHHHHHHHSC
T ss_pred             CCCCEEEEEecCCCCCCEEEEEEECCeEEEEEEEECCCCcccccccccccccccccEEEeCCcccCCHHHHHHHHhhCC
Confidence            3568999999988888999999999988776643221                   12     2899999999998754

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.12  E-value=0.19  Score=36.21  Aligned_cols=53  Identities=13%  Similarity=-0.063  Sum_probs=42.0

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+....+.+.|+++.++.|+++.... .+| |.      |.++.+|++||...
T Consensus        36 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~   96 (119)
T 2ecd_A           36 INGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVHHHSTV   96 (119)
T ss_dssp             CTTBEEEEEESSSTTEEEEEEECSSCEEEECCCCCSSSCCCCCSSCCCSSHHHHHHHHHHC
T ss_pred             CCCeEEEEeCCCCCCCEEEEEEECCeEEEEEEEEcCCCCEEEcCCCcCCCHHHHHHHHhhC
Confidence            4688999999888889999999999998876542 223 22      78999999998764

>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_A 3t04_A 1ab2_A

Probab=90.00  E-value=0.18  Score=35.77  Aligned_cols=53  Identities=11%  Similarity=-0.098  Sum_probs=41.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+....+.+.||++.+..|+++.... .+| |.      |.++.+|++||...
T Consensus        25 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LV~~y~~~   85 (112)
T 3k2m_A           25 INGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTV   85 (112)
T ss_dssp             CTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEESSTTCCBSSHHHHHHHHHHC
T ss_pred             CCceEEEEeCCCCCCCEEEEEEeCCcEEEEEEEECCCCcEEECCCCeECCHHHHHHHHhhC
Confidence            4689999999888999999999999887776532 222 22      78999999998753

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=89.68  E-value=0.24  Score=38.65  Aligned_cols=50  Identities=18%  Similarity=0.126  Sum_probs=37.7

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      ...+.++|+|.+....+++|++|+++.+... ...+||.........+++.
T Consensus        14 ~~~~~al~d~~~~~~~el~~~~Gd~~~v~~~-~~~~w~~~~~~g~~gl~p~   63 (222)
T 3ehr_A           14 VKVFRALYTFEPRTPDELYIEEGDIIYITDM-SDTNWWKGTSKGRTGLIPS   63 (222)
T ss_dssp             CEEEEESSCCCCSSTTBCCCCTTCEEEEEEC-CSSSEEEEEETTEEEEEEH
T ss_pred             ceEEEEeCCcCCCCCCcccccCCCEEEEecc-ccchhHhcccCCcceeech
Confidence            3467999999999999999999999988876 5667775444444444443

>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit; transferase, polymorphism, UBL conjugation, phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A 1oo4_A* 2pna_A 2pnb_A

Probab=89.63  E-value=0.17  Score=36.51  Aligned_cols=55  Identities=16%  Similarity=0.115  Sum_probs=42.7

Q ss_pred             CcCcEEEcccccC-CCccccccccccceEEecccc-cccc------cccchhhhhhccchhHH
Q psy15850        131 SEGQARAKFNFVA-QTHLELSLVKESPHKYVDSEV-TLQY------RRPVRNEIKELISEEEL  185 (225)
Q Consensus       131 ~~~~~~a~~~~~~-~~~~els~~~g~~v~~~~~~~-~~~~------~f~~~~~l~e~~~~~e~  185 (225)
                      ..|.|++|.+... .+.+.||++.+..|+++.... .++|      .|.++.+|++||..+.+
T Consensus        31 ~~G~FLVR~S~~~~~g~y~LSv~~~~~v~H~~I~~~~g~~~l~~~~~F~sl~~LI~~y~~~~~   93 (120)
T 2iug_A           31 ADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESL   93 (120)
T ss_dssp             CTTEEEEEECSSGGGCSEEEEEEETTEEEEEEEEEETTEEESSSSCCBSSHHHHHHHHHHSCG
T ss_pred             CCcEEEEECCCCCCCCcEEEEEEECCEEEEEEEEEcCCEEEECCCCccCCHHHHHHHHHhCcc
Confidence            5689999999887 889999999998887765432 2334      27999999999987653

>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*

Probab=89.57  E-value=0.18  Score=35.27  Aligned_cols=53  Identities=11%  Similarity=0.014  Sum_probs=40.2

Q ss_pred             CcCcEEEcccccCCCcccccccc-----ccceEEecccc--ccccc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVK-----ESPHKYVDSEV--TLQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~-----g~~v~~~~~~~--~~~~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+....+.+.||+..     +..|+++....  +++|.      |.++.+|++||..+
T Consensus        26 ~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LI~~y~~~   91 (105)
T 1lkk_A           26 THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNA   91 (105)
T ss_dssp             CTTCEEEEECSSSTTCEEEEEEEEETTTEEEEEEEEEEECTTSCEESSTTSCBSSHHHHHHHHHHC
T ss_pred             CCceEEEEECCCCCCcEEEEEEEcccCCCCcEEEEEEEECCCCCEEECCCceeCCHHHHHHHHhhC
Confidence            56899999998888899999997     66776665432  22222      88999999998764

>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.57  E-value=0.18  Score=36.38  Aligned_cols=54  Identities=6%  Similarity=-0.087  Sum_probs=42.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc-----ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR-----RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~-----f~~~~~l~e~~~~~e  184 (225)
                      ..|.|++|.+....+.+.|+++.++.|+++.... .+| |.     |.++.+|++||..+.
T Consensus        37 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~F~sl~~LI~~y~~~~   97 (119)
T 2gsb_A           37 QVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQ   97 (119)
T ss_dssp             CSSEEEEEECSSSTTCEEEEEECSSCBCCCCEEEETTTEEEESSCCBSCHHHHHHHHTTSC
T ss_pred             CCCeEEEEeCCCCCCceEEEEEECCEEEEEEEEEcCCCCEEECCcccCCHHHHHHHHhhCc
Confidence            3588999999888889999999998887765532 223 22     899999999998754

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=89.17  E-value=0.18  Score=35.12  Aligned_cols=48  Identities=15%  Similarity=-0.002  Sum_probs=34.2

Q ss_pred             cEEEcccccCCCccccccccccceEEeccccc-cccc-ccchhhhhhccch
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQYR-RPVRNEIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~~-f~~~~~l~e~~~~  182 (225)
                      .+.|+++ ...+..+|+|+.|+++.+++...+ .+|| -...+.-..|++.
T Consensus        30 ~a~a~~~-~k~g~~dLp~~~GE~LeII~~~e~p~g~Wl~RN~~G~~GyVp~   79 (96)
T 2gtj_A           30 LAKACCD-VKGGKNELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKT   79 (96)
T ss_dssp             EEEESSC-EECTTSCCEECTTCCEEEEECTTCSSSCCEEECTTCCBCCCCG
T ss_pred             EEEEeec-CCCCcccCCcCCCCEEEEEEccCCCCCeEEEECCCCCCCccch
Confidence            4678888 677889999999999999998543 4555 3444444555544

>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}

Probab=88.84  E-value=0.21  Score=45.95  Aligned_cols=53  Identities=13%  Similarity=0.080  Sum_probs=44.2

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccccc-------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYR-------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~-------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+....+++.|||..|+.|+++.....++++       |.++.+|++||...
T Consensus        23 ~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~eLv~~y~~~   82 (595)
T 3ps5_A           23 VHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQ   82 (595)
T ss_dssp             CTTCEEEEECSSSTTSEEEEEEETTEEEEEEEEECSSCEESSSSCCBSSHHHHHHHHHTT
T ss_pred             CCCEEEEeecCCCCCceEEEEEECCEEEEEEEEeCCCcEEEecCccccchhhhhhhhccC
Confidence            468999999999999999999999999888654333333       89999999999775

>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A

Probab=88.74  E-value=0.28  Score=34.31  Aligned_cols=53  Identities=8%  Similarity=-0.020  Sum_probs=40.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc--cc---c-------cccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT--LQ---Y-------RRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~--~~---~-------~f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+....+.+.||+..+..|+++.....  +|   |       .|.++.+|++||..+
T Consensus        27 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~   91 (105)
T 1nrv_A           27 VDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLN   91 (105)
T ss_dssp             CTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHHHHHHTTC
T ss_pred             CCceEEEEeCCCCCCCEEEEEEeCCEEEEEEEEEEcCCCCEEEEEcCCCcccCCHHHHHHHhhhC
Confidence            56899999998888899999999988877654321  22   3       278899999998864

>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1

Probab=88.74  E-value=0.34  Score=33.69  Aligned_cols=53  Identities=9%  Similarity=-0.128  Sum_probs=41.3

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc------------ccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ------------YRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~------------~~f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+....+.+.||+..+..|+++.... .+|            -.|+++.+|+++|..+
T Consensus        24 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~   89 (103)
T 1i3z_A           24 VDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKYGKP   89 (103)
T ss_dssp             STTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHHHTTSS
T ss_pred             CCceEEEEeCCCCCCCEEEEEEECCEEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHHHHhhC
Confidence            5689999999888889999999999887765531 122            2378899999999864

>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}

Probab=88.69  E-value=0.29  Score=36.23  Aligned_cols=56  Identities=13%  Similarity=0.024  Sum_probs=43.8

Q ss_pred             CCcCcEEEcccccCCCccccccccccceEEeccccc--cc---cc------ccchhhhhhccchhHH
Q psy15850        130 LSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT--LQ---YR------RPVRNEIKELISEEEL  185 (225)
Q Consensus       130 ~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~--~~---~~------f~~~~~l~e~~~~~e~  185 (225)
                      ...|.|++|.+....+.+.||++.+..|+++.....  +|   |.      |.++.+|++||..+.+
T Consensus        48 ~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~gg~~~~~l~~~~~F~sl~eLI~~y~~~~l  114 (138)
T 2dx0_A           48 AKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYALIQHYREAHL  114 (138)
T ss_dssp             CCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSCBSSHHHHHHHTTTSCC
T ss_pred             CCCCEEEEEeCCCCCCCeEEEEEECCeEEEEEEEEecCCCceEEEeCCCCcCCCHHHHHHHHhhCCC
Confidence            366899999998888899999999998877665322  21   22      8999999999988653

>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction, peptide complex, complex (proto-oncogene/early protein); HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*

Probab=88.63  E-value=0.23  Score=34.75  Aligned_cols=53  Identities=13%  Similarity=0.026  Sum_probs=40.5

Q ss_pred             CcCcEEEcccccCCCcccccccc-----ccceEEecccc--ccccc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVK-----ESPHKYVDSEV--TLQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~-----g~~v~~~~~~~--~~~~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+....+.+.||+..     +..|+++....  +++|.      |.++.+|++||..+
T Consensus        27 ~~G~FLVR~S~~~~g~~~LSv~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~   92 (106)
T 1aot_F           27 PRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSER   92 (106)
T ss_dssp             CTTEECCBCBSSSSSBBCCEEECCBTTTBCCEEECCBEEETTTEEEEETTEEESSHHHHHHHHTTC
T ss_pred             CCcEEEEEeCCCCCCCEEEEEEecccCCCCcEEEEEEEEeCCCCEEECCCCccCCHHHHHHHhccC
Confidence            56889999998888899999985     67787765532  22332      79999999999864

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*

Probab=88.56  E-value=0.36  Score=40.50  Aligned_cols=53  Identities=9%  Similarity=0.113  Sum_probs=30.6

Q ss_pred             cEEEcccccCCCcc-----ccccccccceEEecccccccccc------cchhhhhhccchhHHHH
Q psy15850        134 QARAKFNFVAQTHL-----ELSLVKESPHKYVDSEVTLQYRR------PVRNEIKELISEEELAR  187 (225)
Q Consensus       134 ~~~a~~~~~~~~~~-----els~~~g~~v~~~~~~~~~~~~f------~~~~~l~e~~~~~e~~~  187 (225)
                      .+.|.++|.+..+.     .|+|++||++.|++.. +.+||-      ...+....+++......
T Consensus         7 yvRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~~~~-d~~wWqA~~v~~~~~~~~~GlIPS~~~~e   70 (292)
T 3tvt_A            7 YVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNAS-DDEWWQARRVLGDNEDEQIGIVPSKRRWE   70 (292)
T ss_dssp             EEEECSCBCC---------CCCBCTTCEEEEEECC-SSSEEEECCCCC--------EEECHHHHH
T ss_pred             EEEEeccCCCCCCCCCCCCcCCcCCCCEEEEeecC-CCCeEEEEEeCCCCCccceeEEeChHHHH
Confidence            35788999877655     4999999999999884 446662      22344567887754433

>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B

Probab=88.31  E-value=0.27  Score=35.04  Aligned_cols=53  Identities=9%  Similarity=-0.016  Sum_probs=39.4

Q ss_pred             CcCcEEEcccccCCCccccccccc------cceEEecc----ccccccc------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKE------SPHKYVDS----EVTLQYR------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g------~~v~~~~~----~~~~~~~------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+ ...+.+.||+...      ..|+++..    ..++.|.      |+++.+|++||..+.
T Consensus        30 ~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~   98 (118)
T 3s9k_A           30 KEGAFMVRDS-RTPGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNG   98 (118)
T ss_dssp             CTTCEEEEEC-SSTTCEEEEEEECCSCSSSCEEEEEEEEECSCSSCCEEEECSCCCSCHHHHHHHHHHCC
T ss_pred             CCCeEEEEee-CCCCCEEEEEEecccccCCCceEEEEEeEEECCCCCEEECCCcccCCHHHHHHHheeCC
Confidence            4688999999 8888999999874      66766654    1222232      899999999998754

>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A

Probab=88.19  E-value=0.18  Score=35.87  Aligned_cols=53  Identities=13%  Similarity=0.047  Sum_probs=39.8

Q ss_pred             CcCcEEEcccccCCCcccccccc----ccceEEecccc--ccccc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVK----ESPHKYVDSEV--TLQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~----g~~v~~~~~~~--~~~~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+....+.+.||+..    +..|+++....  +++|.      |.++.+|++||..+
T Consensus        34 ~~G~FLVR~S~~~~g~y~LSv~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~   98 (114)
T 1blj_A           34 KAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKK   98 (114)
T ss_dssp             CTTCEEBCBCTTCSSCEEEEECBCCTTTCBCCCEEEEEETTTEEEEETTEEESSHHHHHHHHHHC
T ss_pred             CCceEEEEeCCCCCCCEEEEEEEecCCCCcEEEEEEEEcCCCCEEECCCcccCCHHHHHHHhhhC
Confidence            56889999998888899999997    66676654422  22232      78999999998764

>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*

Probab=87.92  E-value=0.36  Score=33.67  Aligned_cols=53  Identities=4%  Similarity=-0.162  Sum_probs=41.2

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccc-cccc------------ccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQ------------YRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~------------~~f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+....+.+.||+..+..|+++... ..+|            -.|.++.+|++||..+
T Consensus        25 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~   90 (104)
T 1d4t_A           25 LDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKP   90 (104)
T ss_dssp             CTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHHHHHTSS
T ss_pred             CCCEEEEeeCCCCCCCEEEEEEECCeEEEEEEEECCCCeEEEeccCCCCCcccCCHHHHHHHHhhC
Confidence            568999999988888999999999888776543 1122            2378899999998865

>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal transduction inhibitor, KIT regula phosphotyrosine, signaling protein; HET: PTR; 1.45A {Homo sapiens}

Probab=87.03  E-value=0.45  Score=35.23  Aligned_cols=54  Identities=11%  Similarity=-0.044  Sum_probs=41.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-c---------cccccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-L---------QYRRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~---------~~~f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+....+.+.|+++.++.|+++..... +         .-.|.++.+|++||..+.
T Consensus        44 ~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~g~~~l~~~~~~~~F~sl~eLI~~y~~~~  107 (141)
T 2vif_A           44 PDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIGDS  107 (141)
T ss_dssp             CTTCEEEEECSSTTCSEEEEEEETTEEEEEEEEEETTEEEETTCCSCCCBSSHHHHHHHHHHHH
T ss_pred             CCceEEEEecCCCCCCEEEEEEECCEEEEEEEEEECCEEEEeecCCCCccCCHHHHHHHHhhCC
Confidence            56899999999888899999999888877654322 2         233788999999998754

>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=86.81  E-value=0.58  Score=33.50  Aligned_cols=54  Identities=7%  Similarity=-0.054  Sum_probs=41.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc--ccc-----------ccccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQ-----------YRRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~-----------~~f~~~~~l~e~~~~~e  184 (225)
                      ..|.|++|.+....+.+.||++.+..|+++....  .+.           -.|.++.+|++||..+.
T Consensus        31 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~eLV~~y~~~~   97 (119)
T 2ysx_A           31 KDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFTVQASEGVSMRFFTKLDQLIEFYKKEN   97 (119)
T ss_dssp             CTTEEEEEECSSCTTSEEEEEECSSCEEEEEEEECTTSCEEECCSCSSSCCCBSSHHHHHHHTTSSS
T ss_pred             CCCEEEEEeCCCCCCCEEEEEEECCEEEEEEEEEcCCCCEEEeccCCcCCcccCCHHHHHHHHhhCC
Confidence            4688999999888889999999998887765431  121           24788999999998753

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=86.75  E-value=0.47  Score=41.40  Aligned_cols=55  Identities=18%  Similarity=0.236  Sum_probs=38.2

Q ss_pred             cEEEcccccCCCccccccccccceEEeccc--ccccccccc-hhh-----hhhccchhHHHHH
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSE--VTLQYRRPV-RNE-----IKELISEEELARR  188 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~--~~~~~~f~~-~~~-----l~e~~~~~e~~~~  188 (225)
                      .+.|+|+|.+..+.+|+|++||++.+++..  ...+||... ...     -..+++.+....+
T Consensus       108 ~vral~dy~~~~~~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~~~~e~  170 (391)
T 3tsz_A          108 YIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQ  170 (391)
T ss_dssp             EEEECSCBCCSSTTBCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEECHHHHHH
T ss_pred             ccccccccCCCCCCcceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEecCHHHHHH
Confidence            356999999999999999999999999873  235677321 111     2566666555433

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=86.58  E-value=0.42  Score=45.00  Aligned_cols=53  Identities=15%  Similarity=0.155  Sum_probs=37.6

Q ss_pred             cEEEcccccCCCccc-----cccccccceEEecccccccccccchh------hhhhccchhHHHH
Q psy15850        134 QARAKFNFVAQTHLE-----LSLVKESPHKYVDSEVTLQYRRPVRN------EIKELISEEELAR  187 (225)
Q Consensus       134 ~~~a~~~~~~~~~~e-----ls~~~g~~v~~~~~~~~~~~~f~~~~------~l~e~~~~~e~~~  187 (225)
                      .+.|+|+|.+..+.+     |+|++||++.++... ..+||..-+.      .-..+++.+....
T Consensus       429 ~vrAl~dy~~~~d~~~p~~~LsF~~GDil~v~~~~-~~~WW~a~~~~~~~~~~~~G~iPs~~~~e  492 (721)
T 2xkx_A          429 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAG-DEEWWQARRVHSDSETDDIGFIPSKRRVE  492 (721)
T ss_pred             eEEEeeccCcCCCCCCccccccccCCCEEEEeecC-CCCeEEEEECCCCCccCccceeecHHHHH
Confidence            357999999998888     999999999999874 4567742211      2346666655443

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=86.57  E-value=0.34  Score=38.38  Aligned_cols=51  Identities=14%  Similarity=0.167  Sum_probs=38.5

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccc--cccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTL--QYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~--~~~f~~~~~l~e~~~~  182 (225)
                      .+...+++++.+....++.+++|++++++......  +||...++.-..+.+.
T Consensus       170 ~~~~~al~d~~~~~~~eLa~~~G~~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~  222 (239)
T 1ycs_B          170 KGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPR  222 (239)
T ss_dssp             GGEEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEG
T ss_pred             cceEEEEeccCCCCCCcccccCCCEEEEEEecCCCCCCEEEEEECCcEEEeeh
Confidence            35678999999999999999999999999874333  4886555554444444

>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A

Probab=86.48  E-value=0.56  Score=34.12  Aligned_cols=54  Identities=4%  Similarity=-0.151  Sum_probs=41.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc------------ccccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ------------YRRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~------------~~f~~~~~l~e~~~~~e  184 (225)
                      ..|.|++|.+....+.+.||++.+..|+++.... .+|            -.|.++.+|++||..+.
T Consensus        25 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~g~~~~~F~sl~~LV~~y~~~~   91 (128)
T 1ka6_A           25 LDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPD   91 (128)
T ss_dssp             CTTCEEEEECSSSTTCEEEEEESSSCEEEEEEEECTTSCEEEECSTTSCCCEESSHHHHHHHTTSSC
T ss_pred             CCCEEEEeecCCCCCCEEEEEEeCCEEEEEEEEECCCCeEEEeecCCCCCCccCCHHHHHHHHhhCC
Confidence            5688999999888889999999999887765531 222            23788999999998753

>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A

Probab=85.92  E-value=0.46  Score=33.84  Aligned_cols=53  Identities=13%  Similarity=-0.105  Sum_probs=40.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc--ccc----------ccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQ----------YRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~----------~~f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+....+.+.||+..+..|+++....  .+|          -.|.++.+|++||..+
T Consensus        36 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~~F~sl~~LV~~y~~~  100 (117)
T 3pqz_A           36 VDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLN  100 (117)
T ss_dssp             CTTEEEEEECCC-CCCEEEEEEETTEEEEEEEEEECCTTCCEEESSTTSSCBSSHHHHHHHHHHC
T ss_pred             CCCEEEEEecCCCCCcEEEEEEeCCeeEEEEEEEecCCCCEEEEECCCCcccCCHHHHHHHHhhC
Confidence            4688999999888889999999999887766532  122          1278899999998764

>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}

Probab=85.48  E-value=0.55  Score=33.08  Aligned_cols=52  Identities=10%  Similarity=-0.003  Sum_probs=37.9

Q ss_pred             CcCcEEEcccccCCCcccccccc------ccceEEeccccc-cc-cc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVK------ESPHKYVDSEVT-LQ-YR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~------g~~v~~~~~~~~-~~-~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+ ...+.+.||++.      +..|+++..... +| |.      |.++.+|++||..+
T Consensus        32 ~~G~FLVR~S-~~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~   97 (110)
T 2ekx_A           32 KEGAFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHN   97 (110)
T ss_dssp             CTTEEEEEEC-SSTTCEEEEECCCCSSCSSCCCEEEECEECTTCCEESSTTCCCSCHHHHHHHHHHS
T ss_pred             CCceEEEEec-CCCCCEEEEEEeccccCCCCcEEEEEEEECCCCCEEECCCCccCCHHHHHHHHeeC
Confidence            5688999999 668889999985      456766654321 23 22      88999999998764

>4fbn_A 1-phosphatidylinositol 4,5-bisphosphate phosphodi gamma-1; SH2 domain, plcgamma specific array, interaction domain, FIB growth factor receptor 1; 2.40A {Homo sapiens} PDB: 4ey0_A* 3gqi_B* 2fci_A* 2pld_A* 2ple_A*

Probab=85.30  E-value=0.47  Score=38.70  Aligned_cols=55  Identities=5%  Similarity=-0.086  Sum_probs=43.2

Q ss_pred             CCcCcEEEcccccCCCccccccccccceEEeccccc-c----------cccccchhhhhhccchhH
Q psy15850        130 LSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-L----------QYRRPVRNEIKELISEEE  184 (225)
Q Consensus       130 ~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~----------~~~f~~~~~l~e~~~~~e  184 (225)
                      ...|.|++|.+.+..+++.|||..++.|+++..... +          +-.|.++.+|++||....
T Consensus        34 ~~dG~FLVR~S~s~~G~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~~~F~sl~~LV~~y~~~~   99 (246)
T 4fbn_A           34 APDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQVP   99 (246)
T ss_dssp             CCTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEEECGGGCCEEEEETTEEESSHHHHHHHHHHSC
T ss_pred             CCCCEEEEEcCCCCCCCEEEEEEECCEEEEEEEEEECCCCceeEEecCCcccCCHHHHHHhHhhcc
Confidence            356899999999999999999999999987765211 1          122899999999997644

>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2 domain, signaling protein; 2.30A {Homo sapiens}

Probab=84.99  E-value=0.6  Score=33.96  Aligned_cols=53  Identities=11%  Similarity=-0.043  Sum_probs=41.3

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc--ccc-c---------cccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQ-Y---------RRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~-~---------~f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+....+.+.||++.++.|+.+....  .+| |         .|.++.+|++||..+
T Consensus        48 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~G~~~~~l~~~~~~F~SL~eLV~~y~~~  112 (126)
T 2aug_A           48 VDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQLVEFYQLN  112 (126)
T ss_dssp             CTTEEEEEECSSSSCCEEEEEEETTEEEEEEEEEEEETTEEEEESSTTSSCBSSHHHHHHHHTTC
T ss_pred             CCCEEEEeecCCCCCCEEEEEEcCCeEEEEEEEEECCCCeEEEEeCCCCCccCCHHHHHHHHhhC
Confidence            4689999999888899999999998887765432  122 2         278899999998864

>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor, growth regulation, signal transduction, SH2 domain, nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=84.81  E-value=0.73  Score=36.01  Aligned_cols=55  Identities=13%  Similarity=0.040  Sum_probs=41.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-ccc----------cccchhhhhhccchhHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQY----------RRPVRNEIKELISEEEL  185 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~----------~f~~~~~l~e~~~~~e~  185 (225)
                      ..|.|+++.+........||++.++.|+.+..... ++|          .|.++.+|++||..++.
T Consensus        54 ~dGtFLVR~S~~~~~~lsLSvr~~~~v~H~rI~~~~g~f~l~~~~~~~~~F~SL~eLV~hY~~~~~  119 (187)
T 2izv_A           54 PEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSA  119 (187)
T ss_dssp             CTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHHHHTCCGGG
T ss_pred             CCCcEEEEECCCCCceEEEEEeeCCeEEEEEEEECCCEEEEeccCCCccccCCHHHHHHHHHhccc
Confidence            46889999998767777889998888877654322 222          47889999999988754

>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.93.1.1

Probab=84.75  E-value=0.71  Score=33.09  Aligned_cols=54  Identities=7%  Similarity=0.009  Sum_probs=41.2

Q ss_pred             CCcCcEEEcccccCCCccccccccccceEEecccc--cccc-------cccchhhhhhccchhH
Q psy15850        130 LSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQY-------RRPVRNEIKELISEEE  184 (225)
Q Consensus       130 ~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~~-------~f~~~~~l~e~~~~~e  184 (225)
                      ...|.|++|.+....+ +.|+++.++.|+++....  +++|       .|.++.+|++||..+.
T Consensus        35 ~~~G~FLVR~S~~~~~-y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~~F~sl~eLV~~y~~~~   97 (119)
T 2cs0_A           35 QPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKP   97 (119)
T ss_dssp             SCTTCEEEEECSSSSS-EEEEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTSC
T ss_pred             CCCCEEEEEecCCCCC-EEEEEEECCEEEEEEEEEcCCCcEEEecCCCcCCCHHHHHHHHhhCc
Confidence            3568899999988777 999999998887775432  2223       2789999999998754

>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70, tyrosine kinase, transferase; HET: PTR; 1.90A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A

Probab=84.09  E-value=0.56  Score=38.28  Aligned_cols=54  Identities=19%  Similarity=0.108  Sum_probs=42.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+....+.+.||++.+..|+++.... .+| |.      |.++.+|++||..+.
T Consensus        28 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~   89 (254)
T 2oq1_A           28 ADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDP   89 (254)
T ss_dssp             CTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHHHCC
T ss_pred             CCcEEEEEeCCCCCCCEEEEEEECCeEEEEEEEEeCCCCEEeCCCCccCCHHHHHHHHHhCC
Confidence            5689999999988899999999999988776543 222 32      799999999986543

>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*

Probab=84.09  E-value=0.71  Score=33.86  Aligned_cols=31  Identities=19%  Similarity=0.397  Sum_probs=21.4

Q ss_pred             ccccccCCCeEEEEEecCC----CeEEEEECCeEE
Q psy15850         78 TELSFKKGDIIFVRRQVDK----NWYEGEHNAMIG  108 (225)
Q Consensus        78 ~eLs~~~Gdii~v~~~~~~----~Ww~g~~~g~~G  108 (225)
                      ....|..||.|.|..+.++    |||.|+.....|
T Consensus        57 ~~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg   91 (128)
T 3h8z_A           57 YNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKG   91 (128)
T ss_dssp             ---CCCTTCEEEEEECC---CCCEEEEEEEEEEET
T ss_pred             cccCCCCCCEEEEEecCCCCCcCccEEEEEEEeeC
Confidence            3467999999999988766    899999644433

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=84.06  E-value=0.66  Score=31.88  Aligned_cols=50  Identities=18%  Similarity=0.159  Sum_probs=34.7

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccccc----ccccccchhhhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT----LQYRRPVRNEIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~----~~~~f~~~~~l~e~~~~  182 (225)
                      +..+.+..++.+..+.+|++.+||+|.++.+...    ..|| .-....+.|++.
T Consensus        17 ~~LY~~t~~~~~tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~-Vdtgg~~GyvPs   70 (92)
T 1ug1_A           17 EKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWL-IDNGVTKGFVYS   70 (92)
T ss_dssp             GGEEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEE-EECSSSEEEEEG
T ss_pred             hheEEeccCcCCCCceeeeecCCCEEEEEecCCCCCCCcceE-EECCCcEEeeEh
Confidence            3457777788888889999999999999987532    3344 333555555544

>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A

Probab=83.88  E-value=1.3  Score=37.09  Aligned_cols=39  Identities=15%  Similarity=0.193  Sum_probs=33.1

Q ss_pred             cccccCCCeEEEEEecCCCeEEEEE-CCeEEEeeCCcEEeec
Q psy15850         79 ELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVEIIP  119 (225)
Q Consensus        79 eLs~~~Gdii~v~~~~~~~Ww~g~~-~g~~G~~P~nyv~~~~  119 (225)
                      .-.+..|+.+.|+++ + +|++.+. +|..||++..++..+.
T Consensus        34 ~~~l~~G~~v~Vl~~-~-gW~~V~~~dG~~GwV~~~~l~~~~   73 (306)
T 3npf_A           34 STQALLGMPVKVLQY-N-GWYEIQTPDDYTGWVHRMVITPMS   73 (306)
T ss_dssp             EEEEETTCEEEEEEE-S-SEEEEECTTSCEEEEEGGGEEEEC
T ss_pred             eEEEcCCCEEEEEEE-C-CEEEEEcCCCCEEEEEhHHeeecC
Confidence            456778999999987 3 6999997 8999999999998764

>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*

Probab=83.25  E-value=0.56  Score=42.48  Aligned_cols=54  Identities=13%  Similarity=0.089  Sum_probs=43.6

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccccc-------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYR-------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~-------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+....+.+.||++.|+.|+++.....++|+       |.++.+|++||..+.
T Consensus        23 ~~G~FLvR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~Lv~~y~~~~   83 (532)
T 2b3o_A           23 VHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQ   83 (532)
T ss_dssp             CTTEEEEEECSSSSSEEEEEEEETTEEEEEEEECSSSCEEETTSCEESCHHHHHHHHHTTC
T ss_pred             CCCCEEEecCCCCCCceEEEEEECCEEEEEEEEecCCEEEECCCcccCCHHHHHHHHHhcc
Confidence            568999999999999999999999999877654333332       789999999997653

>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}

Probab=83.09  E-value=0.92  Score=34.10  Aligned_cols=54  Identities=11%  Similarity=-0.011  Sum_probs=42.3

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cc-------------ccccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQ-------------YRRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~-------------~~f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+....+.+.|+++.++.|+++..... ++             -.|.++.+|++||..++
T Consensus        54 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~rI~~~~g~f~l~~~~~~~~~~~~F~SL~eLV~~Y~~~~  121 (152)
T 2hmh_A           54 PAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRSTQPVPRFDXVLKLVHHYMPPQ  121 (152)
T ss_dssp             CTTEEEEEECCSTTCSEEEEEEETTEEEEEEEECGGGCBEECBCTTCSSCCCCBSSHHHHHHHTCCCC
T ss_pred             CCCcEEEEeCCCCCCcEEEEEEcCCceEEEEEEecCCEEEEecccccccccCccCCHHHHHHHHhhCc
Confidence            56889999998888999999999988877654322 11             33678999999999875

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=82.91  E-value=0.75  Score=37.50  Aligned_cols=53  Identities=15%  Similarity=0.061  Sum_probs=42.5

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc--ccccc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+....+.+.||++.++.|+++....  ++.|.      |.++.+|++||..+
T Consensus        27 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLv~~y~~~   87 (254)
T 1a81_A           27 SDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQE   87 (254)
T ss_dssp             CTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTTC
T ss_pred             CCcEEEEEecCCCCCCEEEEEEECCeeEEEEEEEcCCCCEEeCCCCCcCCHHHHHHHHHhC
Confidence            5789999999988899999999999888776542  22232      79999999999764

>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}

Probab=82.34  E-value=0.74  Score=33.33  Aligned_cols=53  Identities=9%  Similarity=-0.000  Sum_probs=38.4

Q ss_pred             CcCcEEEcccccCCCcccccccc------ccceEEecccc-ccc-c------cccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVK------ESPHKYVDSEV-TLQ-Y------RRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~------g~~v~~~~~~~-~~~-~------~f~~~~~l~e~~~~~e  184 (225)
                      ..|.|++|.+ ...+.+.||++.      +..|+.+.... .+| |      .|.++.+|++||..+.
T Consensus        32 ~~G~FLVR~S-s~~g~y~LSv~~~~~~~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~eLV~~y~~~~   98 (125)
T 2ge9_A           32 KEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELINYHQHNS   98 (125)
T ss_dssp             CTTEEEEEEC-SSSCCEEEEEEESSSSSTTCEEEEEECEEETTTEEESSTTSCBSSHHHHHHHHHCCC
T ss_pred             CCceEEEEec-CCCCCEEEEEEeccccCCCCeEEEEEEEEcCCCCEEECCCCcCCCHHHHHHHhhhCC
Confidence            5688999999 678889999985      45676665432 223 3      2899999999997654

>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain; HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1csy_A* 1csz_A*

Probab=80.75  E-value=0.99  Score=36.77  Aligned_cols=53  Identities=11%  Similarity=0.020  Sum_probs=41.6

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-c------cccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-Y------RRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~------~f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+ ...+.+.||+..+..|+++.... .+| |      .|.++.+|++||..+.
T Consensus       180 ~~G~FLVR~S-~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~  240 (254)
T 1a81_A          180 TNGKFLIRAR-DNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKA  240 (254)
T ss_dssp             CTTCEEEEEC-SSSSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHHTTCC
T ss_pred             CCceEEEEec-CCCCCEEEEEEECCEEEEEEEEEcCCCCEEecCCcccCCHHHHHHHHHHCC
Confidence            5688999999 88899999999999887776532 122 2      2899999999998754

>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain, signal transduction inhibitor nuclear protein; 1.9A {Homo sapiens} SCOP: a.271.1.1 d.93.1.1

Probab=80.38  E-value=1.1  Score=34.24  Aligned_cols=56  Identities=9%  Similarity=-0.061  Sum_probs=43.0

Q ss_pred             CCcCcEEEcccccCCCccccccccccceEEeccccc-cc-------------ccccchhhhhhccchhHH
Q psy15850        130 LSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQ-------------YRRPVRNEIKELISEEEL  185 (225)
Q Consensus       130 ~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~-------------~~f~~~~~l~e~~~~~e~  185 (225)
                      ...|.|+++.+....+.+.||++.++.++++..... ++             -.|.++.+|++||..+..
T Consensus        36 ~~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~rI~~~~g~~~l~~~~~~~~~~~~F~sl~eLI~~y~~~~~  105 (169)
T 2c9w_A           36 APEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCK  105 (169)
T ss_dssp             SCTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHHHHHHHTC
T ss_pred             CCCcEEEEecCCCCCCeEEEEEEECCeeEEEEEEEeCCEEEEccccCccccCCCCCCHHHHHHHHHhCcC
Confidence            456899999998888899999999888876654221 11             347789999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	225
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	3e-15
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	2e-14
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	4e-14
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-08
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	8e-14
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	2e-13
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	5e-13
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	6e-13
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	6e-13
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	6e-13
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	7e-13
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	7e-13
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	9e-13
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	7e-12
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	8e-12
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	1e-11
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	1e-11
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	2e-11
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	3e-11
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	3e-11
d1uhca_	79	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	4e-11
d1spka_	72	b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RI	5e-11
d1ue9a_	80	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	6e-11
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	7e-11
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	8e-11
d2v1ra1	67	b.34.2.1 (A:10-76) Peroxisomal membrane protein Pe	1e-10
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	2e-10
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	2e-10
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	2e-10
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	3e-10
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	6e-10
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	7e-10
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	9e-10
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	1e-09
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	2e-09
d1ng2a1	58	b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic	2e-09
d1wlpb1	53	b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic	2e-09
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	2e-09
d1wiea_	96	b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human	6e-09
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	1e-08
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	2e-08
d1bb9a_	83	b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicu	4e-07
d1wfwa_	74	b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [Ta	7e-07
d1phta_	83	b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-a	1e-05
d1vyva1	145	b.34.2.1 (A:71-215) SH3-like domain of the L-type	2e-05
d1i1ja_	106	b.34.2.1 (A:) Melanoma inhibitory activity protein	2e-05
d1kjwa1	96	b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicu	8e-05
d1t0ha_	96	b.34.2.1 (A:) SH3-like domain of the L-type calciu	8e-05
d1vyua1	136	b.34.2.1 (A:39-174) SH3-like domain of the L-type	6e-04
d1ug1a_	92	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	0.001

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (162), Expect = 3e-15
 Identities = 21/41 (51%), Positives = 24/41 (58%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELS  KGDII+V R  +  W+EG  N   G FP NYV  I 
Sbjct: 26  ELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIK 66

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 63.5 bits (155), Expect = 2e-14
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 6/63 (9%)

Query: 59  RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
            K++Q L D + +       EL+FK+GD+I +  + D NW+EG+ N   G+FP NYV   
Sbjct: 2   TKFVQALFDFNPQESG----ELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVC-- 55

Query: 119 PYD 121
           PY+
Sbjct: 56  PYN 58

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (155), Expect = 4e-14
 Identities = 20/41 (48%), Positives = 28/41 (68%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           ELSF KG +I V  + D +W++GE N + GLFP NYV++  
Sbjct: 50  ELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKMTT 90

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 1e-08
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 108 GLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVK 153
           G FP ++V+++     R  P      Q  A +++ A    ELS  K
Sbjct: 10  GWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSK 55

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (150), Expect = 8e-14
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)

Query: 61  YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           Y+Q L D   +       EL F++GD I V    D NW++G  +   G+FP NYV 
Sbjct: 3   YVQALFDFDPQEDG----ELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVT 54

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 60.9 bits (148), Expect = 2e-13
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           E++ KKGDI+ +    +K+W++ E N   G  P  YV+ +
Sbjct: 16  EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKL 55

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (145), Expect = 5e-13
 Identities = 17/41 (41%), Positives = 26/41 (63%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
           +L F++GDII V  +V++ W EGE    +G+FP  +VE   
Sbjct: 21  DLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDSA 61

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.3 bits (144), Expect = 6e-13
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           EL F+ G+++ V    + +W+ G  +  +GLFP NYV  +
Sbjct: 17  ELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM 56

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (145), Expect = 6e-13
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
            L+F K DII V  Q  +NW+ GE +   G FP +YV+IIP
Sbjct: 26  HLNFSKHDIITVLEQ-QENWWFGEVHGGRGWFPKSYVKIIP 65

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (145), Expect = 6e-13
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +L+F +G+ I V  Q D  W+ G      G+FP NYV+  
Sbjct: 24  DLTFTEGEEILVT-QKDGEWWTGSIGDRSGIFPSNYVKPK 62

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (144), Expect = 7e-13
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVEIIP 119
           ELSF  G +        +  W EG  N   GL P NYVE + 
Sbjct: 26  ELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLS 67

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (144), Expect = 7e-13
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 79  ELSFKKGDIIFVRRQVDKN---WYEGEHNAMIGLFPFNYVEIIP 119
           EL  K+GD + +  + D++   W+    N   G  P N + + P
Sbjct: 20  ELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP 63

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.9 bits (143), Expect = 9e-13
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           EL+FK G++I V    D NW++GE++   GLFP N+V 
Sbjct: 18  ELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVT 55

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (137), Expect = 7e-12
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)

Query: 79  ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEI 117
           ELSFK+GDI+ V   + D+NWY+ E N   G  P NY+E+
Sbjct: 16  ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEM 55

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.3 bits (136), Expect = 8e-12
 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKN--WYEGEHNAMIGLFPFNYVEII 118
           +L F+KGD+I + ++ D    W+ G  N   G+FP NYVE++
Sbjct: 17  DLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV 58

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.9 bits (135), Expect = 1e-11
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           EL+F + D I     VD +W+ GE   +   GLFP NYV + 
Sbjct: 16  ELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG 57

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.5 bits (134), Expect = 1e-11
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)

Query: 60  KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVE 116
           +Y++ L D +         +L FKKGDI+ +R + ++ W+  E      G+ P  YVE
Sbjct: 2   EYVRALFDFNGNDEE----DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVE 55

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-11
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 79  ELSFKKGDIIFVRRQVD--KNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQ 134
           E+SF  GDII V  +      W  G      G FP NYVE +P  +   A        
Sbjct: 21  EMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSSENEKAVSPKKALL 78

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (133), Expect = 3e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           E+SFK GD I   + +D+ W  G        G+ P NYVE I
Sbjct: 19  EVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEAI 60

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (133), Expect = 3e-11
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMI-GLFPFNYVEIIP 119
           EL+F K  II    + +  W+ G++       FP NYVE + 
Sbjct: 22  ELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMV 63

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (133), Expect = 4e-11
 Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 4/45 (8%)

Query: 79  ELSFKKGDIIFVRRQVDK----NWYEGEHNAMIGLFPFNYVEIIP 119
           ELS      + +    D      W+  E N   G  P NY+    
Sbjct: 29  ELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE 73

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.5 bits (131), Expect = 5e-11
 Identities = 11/63 (17%), Positives = 30/63 (47%), Gaps = 6/63 (9%)

Query: 60  KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWY---EGEHNAMIGLFPFNYVE 116
           + ++ +   ++  +      LSF +GD++ +    +K+ +   E +     G FP +Y +
Sbjct: 8   QKVKTIFPHTAGNNKT---LLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTK 64

Query: 117 IIP 119
           ++ 
Sbjct: 65  LLS 67

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (131), Expect = 6e-11
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNA-----MIGLFPFNYVEIIP 119
           +LS   G +I + ++    W++GE  A       G FP ++V+++ 
Sbjct: 23  QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLG 68

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (130), Expect = 7e-11
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 79  ELSFKKGDIIFVRRQVD-KNWYEGEHNAMIGLFPFNYVEII 118
            LS  KG+ + V        W E +     G  P NY+  +
Sbjct: 16  TLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPV 56

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (130), Expect = 8e-11
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEG-EHNAMIGLFPFNYVEIIP 119
           +L  +KGD  F+  + +  W+   + N   G  P NYV    
Sbjct: 24  DLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 65

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.7 bits (129), Expect = 1e-10
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)

Query: 78  TELSFKKGDIIFVRRQVDKN------WYEGEHNAMIGLFPFNYVEII 118
            E++ KKGD++ +  + D        W     N  IG  P+NY+EII
Sbjct: 21  MEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII 67

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (127), Expect = 2e-10
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWY-EGEHNAMIGLFPFNYVEII 118
           +LSF+KGD + V  +  + W          G  P NYV  +
Sbjct: 20  DLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARV 60

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (126), Expect = 2e-10
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWY-EGEHNAMIGLFPFNYVE 116
           +L F+KG+ + +  Q  + W  +       G  PFN+V 
Sbjct: 22  DLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVA 60

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 2e-10
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDK 122
            E+S  +G+ + V  ++   W+    + + G FP  Y++    D 
Sbjct: 29  DEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDV 73

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (126), Expect = 3e-10
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 79  ELSFKKGDII-FVRRQVDKNWYEGEHNA-MIGLFPFNYVEIIPYDKIRTAPK 128
           +L F KGD++  V    D NWY+ ++     G+ P NYV+    + ++   K
Sbjct: 22  DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQ--KREGVKAGTK 71

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (124), Expect = 6e-10
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
           +LSFKKG+ + +    + +W+          G  P NYV   
Sbjct: 18  DLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS 59

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (123), Expect = 7e-10
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVE 116
           +LSF KG+   +    + +W+E         G  P NYV 
Sbjct: 16  DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVA 55

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (122), Expect = 9e-10
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 79  ELSFKKGDIIFVRRQVD--KNWYEGEH-NAMIGLFPFNYVEIIP 119
           EL+F+KG+ + V  + +    W++ ++    +GL P NYV ++ 
Sbjct: 22  ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS 65

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.3 bits (120), Expect = 1e-09
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 59  RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +KY +  +D  +R    N +ELS  K D++ +     + W     +   G  P N ++I+
Sbjct: 1   KKYAKSKYDFVAR----NSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIM 56

Query: 119 P 119
            
Sbjct: 57  R 57

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.6 bits (121), Expect = 2e-09
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEG-EHNAMIGLFPFNYVEII 118
           +L  ++G    +  + D +W+   +     G  P NYV   
Sbjct: 18  DLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGK 58

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.3 bits (120), Expect = 2e-09
 Identities = 9/41 (21%), Positives = 22/41 (53%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
           +E++   GD++ V  + +  W+  +  A  G  P +++E +
Sbjct: 17  SEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPL 57

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (119), Expect = 2e-09
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
           E+S  +G+ + V  ++   W+    + + G FP  Y++
Sbjct: 16  EVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 53

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.3 bits (120), Expect = 2e-09
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 75  DNFTELSFKKGDIIFV-RRQVDKNWYEGE--HNAMIGLFPFNYVEIIPY 120
                L    GDI+ + + + + NW+EG       +G FP N V   PY
Sbjct: 22  AFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVH--PY 68

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 6e-09
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 75  DNFTELSFKKGDIIFVRRQVDKNWYEGEHNA--MIGLFPFNYVEIIPYDKIRTAP 127
           +   EL    G  ++V   +D++ +          GL P N+V+ +  ++ R A 
Sbjct: 35  NPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRLAS 89

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 48.0 bits (114), Expect = 1e-08
 Identities = 7/39 (17%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVE 116
           EL+ +  +  ++    + +W+  +  N   G  P +Y+ 
Sbjct: 14  ELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 52

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.2 bits (112), Expect = 2e-08
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 3/42 (7%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYE---GEHNAMIGLFPFNYVEI 117
           E++   GD I +  +   + +     +     GL P  Y+ I
Sbjct: 15  EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 56

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.2 bits (104), Expect = 4e-07
 Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 15/55 (27%)

Query: 79  ELSFKKGDIIFVRRQVDK-----NWYEGEH----------NAMIGLFPFNYVEII 118
           EL  K GD++ V    +       W  G                G+FP N+ E +
Sbjct: 28  ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV 82

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (101), Expect = 7e-07
 Identities = 7/53 (13%), Positives = 16/53 (30%), Gaps = 6/53 (11%)

Query: 73  HTDNFTELSFKKGDIIFVRRQVDKNWY------EGEHNAMIGLFPFNYVEIIP 119
           +     E+   +G+++ V     +N             A  G  P + +    
Sbjct: 17  YALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPFS 69

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 1e-05
 Identities = 16/66 (24%), Positives = 22/66 (33%), Gaps = 17/66 (25%)

Query: 75  DNFTELSFKKGDIIFVRRQV---------------DKNWYEG--EHNAMIGLFPFNYVEI 117
           +   ++    GDI+ V +                 +  W  G  E     G FP  YVE 
Sbjct: 15  EREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEY 74

Query: 118 IPYDKI 123
           I   KI
Sbjct: 75  IGRKKI 80

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.3 bits (96), Expect = 2e-05
 Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQ 134
           + +SF   D + ++ + + +W+ G        IG  P          +     K+   G+
Sbjct: 45  SAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLENIRIQQEQKRKRFHGGK 104

Query: 135 AR 136
           + 
Sbjct: 105 SS 106

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 11/71 (15%)

Query: 74  TDNFTELSFKKGDIIFVRRQVDKNW-----------YEGEHNAMIGLFPFNYVEIIPYDK 122
             +   L+  +G +++V  ++               Y G+  A +G FP + V      K
Sbjct: 32  APDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLK 91

Query: 123 IRTAPKKLSEG 133
                 K  + 
Sbjct: 92  PGKVDVKTDKW 102

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.2 bits (88), Expect = 8e-05
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 6/44 (13%)

Query: 79  ELSFKKGDIIFVRRQVDKNWYEGE------HNAMIGLFPFNYVE 116
            LSF+ GD++ V    D+ W++            IG  P     
Sbjct: 22  ALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRV 65

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 38.4 bits (89), Expect = 8e-05
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYV 115
             +SF+  D + V+ + + +W+ G        IG  P    
Sbjct: 43  MAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVK 83

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 136

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.6 bits (84), Expect = 6e-04
 Identities = 6/41 (14%), Positives = 16/41 (39%), Gaps = 3/41 (7%)

Query: 78  TELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYV 115
           + ++F+  D + ++ +   +W+ G        I   P    
Sbjct: 45  SGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQR 85

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.001
 Identities = 7/46 (15%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 78  TELSFKKGDIIFVRRQVD----KNWYEGEHNAMIGLFPFNYVEIIP 119
            ++S  +GD++ V ++ D    +N +  ++    G    ++++   
Sbjct: 32  LDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYN 77

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	225
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	99.76
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.75
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	99.74
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	99.71
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	99.7
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	99.7
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	99.68
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	99.67
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.66
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.66
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	99.66
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	99.66
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.66
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.65
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	99.65
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.65
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	99.63
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	99.63
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	99.63
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.63
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.62
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	99.62
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	99.61
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	99.61
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	99.61
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.61
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	99.6
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	99.6
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.59
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.58
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.58
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	99.58
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.58
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.57
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.57
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	99.56
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	99.55
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	99.54
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.54
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	99.53
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	99.53
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	99.52
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	99.52
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	99.51
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	99.51
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	99.49
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	99.48
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	99.36
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.32
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	99.17
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	98.32
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	98.25
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	98.2
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	98.17
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	98.16
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	98.14
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	98.13
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	98.11
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	98.11
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	98.09
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	98.07
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	98.06
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	98.05
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	98.03
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	97.98
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.97
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	97.93
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	97.93
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	97.92
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.92
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	97.92
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.91
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	97.91
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	97.87
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	97.85
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	97.84
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	97.81
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	97.81
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	97.81
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	97.77
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	97.75
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	97.72
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	97.71
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	97.7
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	97.69
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	97.66
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	97.61
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	97.61
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	97.52
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	97.51
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	97.51
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	97.48
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	97.45
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	97.43
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	97.42
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	97.14
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	95.8
d1ri9a_	77	Fyn-binding protein (T-cell adapter protein adap)	95.7
d1r1qa_	97	GRB2-related adaptor protein 2 (MONA, GRID) {Mouse	94.73
d1jyra_	96	Growth factor receptor-bound protein 2 (GRB2) {Hum	94.48
d1jwoa_	97	Csk homologous kinase Chk {Human (Homo sapiens) [T	93.26
d1k9aa2	101	Carboxyl-terminal src kinase (csk) {Human (Homo sa	92.55
d1rpya_	86	Adaptor protein Aps {Rat (Rattus norvegicus) [TaxI	92.35
d1i3za_	103	Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus	92.07
d1mila_	104	Shc adaptor protein {Human (Homo sapiens) [TaxId:	92.05
d1a81a1	129	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	91.31
d2shpa2	109	Tyrosine phoshatase shp-2 {Human (Homo sapiens) [T	90.93
d1rjaa_	100	Tyrosine-protein kinase 6 (Breast tumor kinase, Br	90.79
d2izva2	112	Suppressor of cytokine signaling 4, SOCS-4 {Human	90.25
d2fcia1	105	Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId:	90.02
d1opka2	101	Abl tyrosine kinase {Mouse (Mus musculus) [TaxId:	89.84
d2oq1a1	130	Tyrosine-protein kinase zap-70 {Human (Homo sapien	88.97
d1a81a2	125	Syk tyrosine kinase {Human (Homo sapiens) [TaxId:	87.31
d1qada_	107	Phosphatidylinositol 3-kinase, p85-alpha subunit {	86.6
d1d4ta_	104	The Xlp protein Sap {Human (Homo sapiens) [TaxId:	86.13
d2eyva1	109	Crk proto-oncogen {Human (Homo sapiens) [TaxId: 96	85.95
d2c9wa2	103	Suppressor of cytokine signaling 2, SOCS-2 {Human	85.44
d2qmsa1	113	Growth factor receptor-bound protein 7 {Human (Hom	85.31
d1nrva_	105	Growth factor receptor-bound protein 10, GRB10 {Hu	85.02
d2oq1a2	124	Tyrosine-protein kinase zap-70 {Human (Homo sapien	84.93
d1qcfa2	103	Hemopoetic cell kinase Hck {Human (Homo sapiens) [	81.19

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=1.1e-18  Score=111.66  Aligned_cols=55  Identities=29%  Similarity=0.643  Sum_probs=52.3

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ++|+|+|||.++    +.+||+|++||+|.|++..+++||.|+.+|+.|+||+|||+++
T Consensus         2 ~yarAlydy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~g~~~g~~G~~P~~yve~i   56 (57)
T d1utia_           2 RWARALYDFEAL----EEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM   56 (57)
T ss_dssp             CEEEESSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEEECcCCCCC----CcCCcCCCCCCEEEEeEEcCCCEEEEEECCcEEEEEHHHEEEc
Confidence            579999999999    7889999999999999999999999999999999999999975

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.9e-18  Score=110.11  Aligned_cols=55  Identities=38%  Similarity=0.766  Sum_probs=51.9

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .+|+|+|||.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.|+||+|||+++
T Consensus         2 tyv~Alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_           2 TYVQALFDFDPQ----EDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPV   56 (56)
T ss_dssp             EEEEESSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEEECcCCCcC----CcCCcCCCCCCEEEEEEecCCCEEEEEECCeEEEEEHhHEEEC
Confidence            478999999999    7889999999999999998999999999999999999999874

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=99.74  E-value=2.9e-18  Score=110.00  Aligned_cols=56  Identities=41%  Similarity=0.736  Sum_probs=52.7

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .++|+|||||.++    ..+||+|++||+|.|+...+++||.|+++|+.||||+|||+++
T Consensus         2 ~~~~~Alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yvep~   57 (58)
T d1sema_           2 TKFVQALFDFNPQ----ESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CCEEEESSCBCCS----STTBCCBCTTCEEEEEECSSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             CEEEEECCCCCcC----CcCCcCCCCCCEEEEeEEcCCCEEEEEECCeEEEEEhhhEEEC
Confidence            3579999999999    7889999999999999999999999999999999999999975

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.71  E-value=1.1e-17  Score=106.10  Aligned_cols=54  Identities=30%  Similarity=0.550  Sum_probs=50.9

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .++|+|||.++    ..+||+|++||+|.|+++.+++||.|+.+|+.||||+|||+.+
T Consensus         2 ~~vAl~dy~~~----~~~eLs~~~Gd~v~v~~~~~~~Ww~g~~~g~~G~~P~~yv~~i   55 (55)
T d1u06a1           2 LVLALYDYQEK----SPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKL   55 (55)
T ss_dssp             EEEECSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEEEC
T ss_pred             EEEECCCCCCC----CcCCccCCCCCEEEEeEEcCCCEEEEEECCeEEEEeHHHEEEC
Confidence            47899999999    7889999999999999999999999999999999999999874

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=1.4e-17  Score=106.69  Aligned_cols=54  Identities=37%  Similarity=0.695  Sum_probs=50.6

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEe
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEI  117 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~  117 (225)
                      +.|+|+|||.++    ..+||+|++||+|.|+++.+++||.|+.+|+.||||+|||+.
T Consensus         3 rr~~Alydy~~~----~~~eLsf~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yV~~   56 (58)
T d1uj0a_           3 RRVRALYDFEAV----EDNELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVTT   56 (58)
T ss_dssp             EEEEESSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTEEEEEEGGGEES
T ss_pred             CEEEECCCCCCC----CcCCcCCCCCCEEEEeEEeCCCEEEEEECCeEEEEehHhEee
Confidence            458999999999    788999999999999999999999999999999999999974

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=8.7e-18  Score=109.19  Aligned_cols=56  Identities=32%  Similarity=0.634  Sum_probs=52.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ...++|||+|.++    ..+||+|++||+|.|++..+++||.|+.+|+.||||+|||+..
T Consensus         5 g~~v~Aly~y~a~----~~~eLsf~~Gd~i~vl~~~~~~Ww~g~~~g~~G~~P~~yVe~~   60 (62)
T d1k4us_           5 GSQVEALFSYEAT----QPEDLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDS   60 (62)
T ss_dssp             CEEEECCSCBCCC----SSSBCCBCSSCEEEEEEESSSSCEEEECSSCEEEECGGGCCCS
T ss_pred             CCEEEECCCCCCC----CcCCcCCCCCCEEEEeEEcCCCEEEEEECCcEEEEchHHeEEC
Confidence            3468999999999    7899999999999999999999999999999999999999875

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=2.4e-17  Score=105.29  Aligned_cols=54  Identities=33%  Similarity=0.738  Sum_probs=50.2

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEe
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEI  117 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~  117 (225)
                      ++++|+|||.++    +.++|+|++||+|.|+.+.+++||.|+ .+|+.|+||+|||++
T Consensus         2 ~~v~Alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yve~   56 (57)
T d1ckaa_           2 EYVRALFDFNGN----DEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             CEEEECCCCCcC----CcCCcCCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEE
Confidence            479999999999    788999999999999999999999999 568999999999985

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=4.8e-17  Score=107.24  Aligned_cols=59  Identities=32%  Similarity=0.671  Sum_probs=50.6

Q ss_pred             cccceEEEEeecccCCCCCCCC-ccccccCCCeEEEEEecC-----CCeEEEEE-CCeEEEeeCCcEEee
Q psy15850         56 ERRRKYLQELHDISSRRHTDNF-TELSFKKGDIIFVRRQVD-----KNWYEGEH-NAMIGLFPFNYVEII  118 (225)
Q Consensus        56 ~~~~~~~~al~d~~~~~~~~~~-~eLs~~~Gdii~v~~~~~-----~~Ww~g~~-~g~~G~~P~nyv~~~  118 (225)
                      +.+..+|+|+|||.|+    +. .||+|++||+|.|+++.+     .+||.|+. +|+.|+||+|||+.+
T Consensus         2 P~~~~~~~Alydy~~~----~~~~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~nyve~i   67 (67)
T d2v1ra1           2 PSKLEFARALYDFVPE----NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   67 (67)
T ss_dssp             GGGCEEEEESSCBCCS----STTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC
T ss_pred             CCcCEEEEECccCCCC----CCCCEeCCCCCCEEEEEEeecCCCcCCCeEEEEeCCCCEEEEEHHHEEEC
Confidence            3456789999999998    54 499999999999998764     48999994 799999999999875

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=6.2e-17  Score=101.70  Aligned_cols=51  Identities=18%  Similarity=0.385  Sum_probs=48.4

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEE
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE  116 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~  116 (225)
                      ..|+|+|.++    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+
T Consensus         3 yval~~y~a~----~~~eLs~~~Gd~v~vl~~~~~gWw~g~~~g~~G~~P~~yve   53 (53)
T d1wlpb1           3 YVAIKAYTAV----EGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ   53 (53)
T ss_dssp             EEECSCBCCC----SSSBCCBCTTCEEEEEECCTTSSEEEESSSCEEEECSTTEE
T ss_pred             EEEeeeECCC----CCCEecCCCCCEEEEEeecCCceEEEEECCcEeEecHHhCC
Confidence            3699999999    78999999999999999999999999999999999999996

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.5e-17  Score=106.67  Aligned_cols=55  Identities=18%  Similarity=0.420  Sum_probs=51.6

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEee
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      ..++|+|||.++    +.+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+++
T Consensus         3 ~~~~al~dy~~~----~~~eLs~~~Gd~i~vl~~~~~~Ww~~~~~g~~G~~P~~yve~l   57 (58)
T d1ng2a1           3 QTYRAIADYEKT----SGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPL   57 (58)
T ss_dssp             EEEECSSCBCCS----STTCCCBCTTCEEEEEECCTTSCCEEEECCCCCCCCGGGCCCS
T ss_pred             eEEEECccCcCC----CCCCcCCCCCCEEEEEEecCCCeEEEEECCCCcEEcHhHEEEC
Confidence            357899999999    7899999999999999999999999999999999999999875

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=6.5e-17  Score=103.65  Aligned_cols=54  Identities=33%  Similarity=0.533  Sum_probs=50.3

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~  118 (225)
                      +|+|+|||.++    ..+||+|++||+|.|+++.+++||.|+.  +|+.|+||+|||+.+
T Consensus         2 ~~~Alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~~P~~yVe~i   57 (58)
T d1jo8a_           2 WATAEYDYDAA----EDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCCC----STTBCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEEccCCCCC----CcCCcCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEchHHEEEc
Confidence            58999999999    7889999999999999999999999995  679999999999976

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=1.3e-16  Score=102.21  Aligned_cols=54  Identities=33%  Similarity=0.708  Sum_probs=49.3

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecC--CCeEEEEECCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD--KNWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~--~~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .|+|+|||.++    +.+||+|++||+|.|+.+.+  .+||.|+.+|+.||||+|||+.+
T Consensus         3 ~~~Alydy~a~----~~~ELs~~~Gd~v~vl~~~~~~~~W~~~~~~g~~G~vP~~yve~i   58 (58)
T d1oota_           3 KAVALYSFAGE----ESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV   58 (58)
T ss_dssp             EEEESSCBCCC----STTBCCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGGGEEEC
T ss_pred             eEEEccCCCCC----CCCCccCCCCCEEEEEEeecCCCCEEEEEECCcEEEEcHHHEEEC
Confidence            48899999999    88999999999999998764  57999999999999999999875

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.2e-17  Score=117.12  Aligned_cols=58  Identities=38%  Similarity=0.631  Sum_probs=53.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|||||.++    ..+||+|++||+|.|+.+.+++||.|+++|+.||||+|||+.+..
T Consensus        34 ~~~~~Alydy~a~----~~~ELsf~~Gd~i~Vl~~~~~gWw~g~~~g~~G~~P~nyVe~~~~   91 (98)
T d1udla_          34 VCQVIAMYDYAAN----NEDELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKMTTD   91 (98)
T ss_dssp             SEEEEESSCCCCS----STTSCCCCTTCEEEECBCCSSSEEBCBSSSCBCCEETTSEEECCC
T ss_pred             ccEEEEccCCCCC----CCCEeeEcCCCEEEEeEecCCCeEEEEECCeEEEEchHHEEECCC
Confidence            4568999999999    788999999999999999999999999999999999999998764

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.1e-16  Score=107.50  Aligned_cols=58  Identities=38%  Similarity=0.558  Sum_probs=52.3

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...++|||||.++    ..+||+|++||+|.|+++ +++||.|+++|+.||||+|||+.+...
T Consensus        10 ~~~~~alydy~a~----~~~ELs~~~Gd~i~vl~~-~~~ww~g~~~g~~G~fP~~yve~i~~~   67 (74)
T d1j3ta_          10 NLKAQALCSWTAK----KDNHLNFSKHDIITVLEQ-QENWWFGEVHGGRGWFPKSYVKIIPGS   67 (74)
T ss_dssp             CCEEEESSCBCCC----STTBCCBCTTCEEEEEEE-CSSEEEEESTTCCCEEEGGGEEECCCS
T ss_pred             CeEEEEccCCCCC----CCCEecCCCCCEEEEEEc-cCCeEEEEECCcEEEEchhhEEECCCC
Confidence            3468999999999    788999999999999988 568999999999999999999998654

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5.8e-17  Score=109.53  Aligned_cols=57  Identities=39%  Similarity=0.623  Sum_probs=53.2

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      ...++|+|||.++    .++||+|++||+|.|+.+.+.+||.|+.+|+.||||+|||+.+.
T Consensus        10 ~~~~rAlydy~a~----~~~eLs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv~~i~   66 (76)
T d1ujya_          10 QLIVKARFNFKQT----NEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIK   66 (76)
T ss_dssp             CEEEECCSCBCCS----STTSCCBCSSCCEEESSCCSSSCEEEEETTEEEEECTTTSEECC
T ss_pred             CEEEEECccCCCC----CCCCccCCCCCEEEEeEEcCCCEEEEEECCcEEEEchHHEEECC
Confidence            4568999999999    78899999999999999989999999999999999999999875

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1e-16  Score=104.33  Aligned_cols=55  Identities=27%  Similarity=0.459  Sum_probs=49.2

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecC---CCeEEEEECCeEEEeeCCcEEeec
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD---KNWYEGEHNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~---~~Ww~g~~~g~~G~~P~nyv~~~~  119 (225)
                      .++|+|||.++    +.+||+|++||+|.|+.+.+   .+||.|+.+|+.|+||+|||+.++
T Consensus         6 ~v~Alydy~a~----~~~ELs~~~Gd~i~vl~~~~~~~~gW~~g~~~g~~G~~P~~yv~~~P   63 (63)
T d1ycsb2           6 VIYALWDYEPQ----NDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP   63 (63)
T ss_dssp             EEEESSCBCCS----STTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEECCC
T ss_pred             EEEEeeCCCCC----CCCCcCCCCCCEEEEEEecCCCCCCEEEEEECCeEEEEchHHhEeCc
Confidence            47899999999    88999999999999997654   369999999999999999998753

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=99.63  E-value=9.4e-17  Score=100.93  Aligned_cols=52  Identities=17%  Similarity=0.351  Sum_probs=48.2

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEe
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEI  117 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~  117 (225)
                      |+|+|||.++    ..+||+|++||+|.|+++.+++||.++ .+|+.||||+|||+.
T Consensus         1 V~Alydy~a~----~~~eLs~~~Gd~~~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~e   53 (53)
T d2rn8a1           1 VIALYDYQTN----DPQELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE   53 (53)
T ss_dssp             EEESSCCCCS----STTBCCCCTTCEEEECCCSCSSCEEEECTTSCEEEECGGGEEE
T ss_pred             CEEeeeECCC----CCCeeeECCCCEEEEeEEcCCCeEEEEeCCCCEEEEeHHHEeC
Confidence            5799999999    788999999999999999999999998 678999999999974

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.63  E-value=1.3e-16  Score=102.48  Aligned_cols=56  Identities=27%  Similarity=0.468  Sum_probs=50.1

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      ++++|+|||.++    ..+||+|++||+|.|+++. ++||.++ .+|+.|+||+|||+.+..
T Consensus         2 ~~a~alydf~a~----~~~ELs~~~Gd~i~v~~~~-~~ww~~~~~~g~~G~~P~nyve~i~~   58 (59)
T d1i07a_           2 KYAKSKYDFVAR----NSSELSVMKDDVLEILDDR-RQWWKVRNASGDSGFVPNNILDIMRT   58 (59)
T ss_dssp             CEEEESSCBCCS----STTBCCBCTTCEEEECGGG-CCEEEEECTTSCEEEEEGGGEEEECC
T ss_pred             eEEEEccCCCCC----CCCeeeEcCCCEEEEEEEc-CCcEEEEEcCCCEEEECHHHeEECCC
Confidence            578999999999    7899999999999999875 4799988 688999999999999864

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.63  E-value=3.7e-16  Score=99.66  Aligned_cols=54  Identities=24%  Similarity=0.372  Sum_probs=48.4

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCC-CeEEEEECCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDK-NWYEGEHNAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~-~Ww~g~~~g~~G~~P~nyv~~~  118 (225)
                      .+.|||||.++    ..+||+|++||+|.|+.+.+. +||.++.+|+.||||+|||+++
T Consensus         2 ~~vAlydy~a~----~~~eLs~~~Gd~i~vl~~~~~~~W~~~~~~g~~G~~P~~yv~~v   56 (57)
T d1opka1           2 LFVALYDFVAS----GDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPV   56 (57)
T ss_dssp             EEEESSCBCCC----STTBCCBCTTCEEEEEEECTTSSEEEEECSSCEEEEEGGGEEES
T ss_pred             EEEECccCCCC----CcCCcCCCCCCEEEEeEecCCCCEEEEEECCCEeEEchhheEEC
Confidence            36799999999    788999999999999987655 5888999999999999999986

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=8.3e-16  Score=104.80  Aligned_cols=59  Identities=20%  Similarity=0.401  Sum_probs=52.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEEC-----CeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHN-----AMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~-----g~~G~~P~nyv~~~~~~  121 (225)
                      ..+++|+|||.++    ..+||+|++||+|.|+.+.+++||.|++.     ++.||||+|||+.+...
T Consensus         7 g~~~~al~~y~~~----~~~eLs~~~Gd~i~Vl~~~~~~Ww~g~~~~~~~~~~~G~~P~~yv~~~~~~   70 (80)
T d1ue9a_           7 GEIAQVTSAYVAS----GSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPS   70 (80)
T ss_dssp             CEEEEECSCCCCC----STTBCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECCSC
T ss_pred             CCEEEECcCCCCC----CCCEeeEcCCCEEEEEEEeCCCeEEEEEccCCCCCCEeEEEheeEEECCCC
Confidence            3568999999999    78999999999999999999999999864     45899999999998654

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.9e-16  Score=100.64  Aligned_cols=53  Identities=40%  Similarity=0.640  Sum_probs=44.4

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEe-cCCCeEEEEECCeEEEeeCCcEEe
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ-VDKNWYEGEHNAMIGLFPFNYVEI  117 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~~g~~G~~P~nyv~~  117 (225)
                      .|+|+|||.++    ..+||+|++||+|.|+.+ .+++||.|+++|+.||||+|||+.
T Consensus         2 ~a~Alydy~a~----~~~ELs~~~Gd~v~v~~~~~~~~W~~~~~~g~~G~vP~nyvev   55 (56)
T d1gria1           2 EAIAKYDFKAT----ADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEM   55 (56)
T ss_dssp             EEEECSCBCCC----SSSCCCBCTTCEEEC------CCEEEEESSSCEEEEEGGGEEC
T ss_pred             EEEEeeCCCCC----CCCCcCCCCCCEEEEEeccCCCCeEEEEECCcEEEEehhhEEE
Confidence            37899999999    788999999999998775 456899999999999999999974

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=4.9e-16  Score=102.35  Aligned_cols=56  Identities=18%  Similarity=0.362  Sum_probs=51.3

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      .++|+|||.+.    +.+||+|++||+|.|+.+.+.+||.++ .+|+.||||+|||+.+..
T Consensus         4 ~v~Alydf~a~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yV~~~~~   60 (67)
T d1gl5a_           4 IVVAMYDFQAT----EAHDLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKS   60 (67)
T ss_dssp             CEEECSCBCCS----SSSBCCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESSTT
T ss_pred             EEEECCCCCCC----CcCCcCCCCCCEEEEEEecCCCcEEEEECCCCEEEEEhHHeEEecC
Confidence            47899999999    889999999999999999999999998 678999999999998654

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=7.3e-16  Score=102.66  Aligned_cols=59  Identities=29%  Similarity=0.478  Sum_probs=51.8

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC--CCeEEEE-ECCeEEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD--KNWYEGE-HNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~--~~Ww~g~-~~g~~G~~P~nyv~~~~~  120 (225)
                      ....++|+|||.++    ..+||+|++||+|.|+.+.+  .+||.++ .+|+.|+||+|||+.+..
T Consensus         5 ~l~~~~Alydf~~~----~~~eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~~G~~G~vP~~yv~~~~~   66 (71)
T d1u5sa1           5 VLHVVQTLYPFSSV----TEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSD   66 (71)
T ss_dssp             SSSEEEESSCCCCC----SSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCC
T ss_pred             ccEEEEECccCCCC----CCCEeeECCCCEEEEEEcccCCCCeEEEEECCCCEEEEChHHEEECCC
Confidence            45679999999999    78999999999999998643  4899998 679999999999999864

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.8e-16  Score=105.99  Aligned_cols=59  Identities=29%  Similarity=0.423  Sum_probs=51.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC-CCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD-KNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~-~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      ...++|||||.++    ..+||+|++||+|.|+.+.+ ++||.|+.+|+.|+||+|||+.++.+
T Consensus        10 ~~~~~alydy~~~----~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~g~~G~~P~~yve~i~~p   69 (72)
T d1ugva_          10 FRKAKALYACKAE----HDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLSGP   69 (72)
T ss_dssp             CCCEEESSCBCCC----SSSBCCBCTTCEEBSCCBCSSTTEEEEESSSCEEEEEGGGEEECCSS
T ss_pred             CEEEEEcccCCCC----CCCEecCCCCCEEEEeeccCCCCEEEEEeCCCEEEEchHHEEECCCC
Confidence            3468999999999    78899999999999887654 57999999999999999999998653

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.6e-16  Score=102.51  Aligned_cols=54  Identities=33%  Similarity=0.616  Sum_probs=49.7

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~  118 (225)
                      .++|+|||.++    +.+||+|++||+|.|+.+.+++||.|+.  +|+.|+||+|||+.+
T Consensus         5 ~~rAl~df~~~----~~~eLs~~~Gd~i~v~~~~~~~W~~~~~~~~g~~G~vP~nyve~i   60 (60)
T d1arka_           5 IFRAMYDYMAA----DADEVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEAI   60 (60)
T ss_dssp             CEECCSCCCCS----SSSBCCCCTTCEECCSEECSSSEEEEECTTTCCEEEEETTTCEEC
T ss_pred             EEEECccCCCC----CCCCcCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEcHHHEEEC
Confidence            47899999999    7899999999999999999999999995  689999999999874

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.8e-16  Score=112.90  Aligned_cols=56  Identities=16%  Similarity=0.290  Sum_probs=52.2

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      .++|+|||.+.    ..+||+|++||+|.|+.+.+++||.|+.+|+.||||+|||+.+..
T Consensus        16 ~~~alydy~a~----~~dELs~~~Gd~i~Vl~~~~~gWw~g~~~g~~G~~P~~yv~~~~~   71 (118)
T d1ng2a2          16 PYVAIKAYTAV----EGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQ   71 (118)
T ss_dssp             EEEESSCBCCC----STTBCCBCTTCEEEEEECCTTSEEEEEETTEEEEEEGGGEEETTS
T ss_pred             EEEECcCCCCC----CCCEecCCCCCEEEEeEecCCCeEEEEECCeEEEEehhhEEECCC
Confidence            46799999999    789999999999999999999999999999999999999998753

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=4.3e-16  Score=104.08  Aligned_cols=58  Identities=26%  Similarity=0.497  Sum_probs=49.0

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEe-cCCCeEEEEEC--CeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ-VDKNWYEGEHN--AMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~~--g~~G~~P~nyv~~~~~  120 (225)
                      .+|+|||||.+..   +.+||+|++||+|.|+.+ .+++||.|+++  |+.||||+|||+.+..
T Consensus         8 ~~~~Alydy~~~~---~~deLsf~~Gd~i~vl~~~~~~gW~~g~~~~~g~~G~fP~nyVe~i~~   68 (72)
T d1spka_           8 QKVKTIFPHTAGN---NKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSG   68 (72)
T ss_dssp             CEEECSSCBCCSS---CSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSS
T ss_pred             CEEEEeeccCCCC---CCCEeeEcCCCEEEEEEeecCCCeEEEEECCCCCEEEEchhhEEECCC
Confidence            4689999999863   567999999999999865 45679999964  7899999999999864

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=8.6e-16  Score=97.97  Aligned_cols=53  Identities=26%  Similarity=0.505  Sum_probs=48.6

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEee
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII  118 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~  118 (225)
                      ++|+|||.++    +.+||+|++||+|.|+.+.+++||.++.  +|+.||||+|||+++
T Consensus         3 ~vAl~dy~a~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~pv   57 (57)
T d1efna_           3 FVALYDYEAI----TEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV   57 (57)
T ss_dssp             EEESSCBCCS----STTBCCBCTTCEEEEEECSSCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             EEECCCCCCC----CcCCcCCCCCCEEEEEEecCCCCEEEEECCCCCEEEEeHHHeEEC
Confidence            5699999999    7889999999999999999999999984  789999999999864

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.1e-15  Score=103.87  Aligned_cols=58  Identities=21%  Similarity=0.309  Sum_probs=51.7

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEec----CCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV----DKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~----~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..+++|||||.++    ..+||+|++||+|.|+++.    +.+||.|+.+|+.||||+|||+.+..
T Consensus        13 ~~~~~Alydy~a~----~~~ELs~~~Gd~i~vl~~~~~~~~~~W~~g~~~g~~G~vP~~yv~~~~~   74 (79)
T d1uhca_          13 NQVYFAVYTFKAR----NPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTES   74 (79)
T ss_dssp             SCCEEESSCBCCC----SSSBCCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGGGEEECCS
T ss_pred             CEEEEECccCCCC----CCCCccCCCCCEEEEEEeecCCCCCCEEEEEECCCEEEEehhhEEECCC
Confidence            3468999999999    7899999999999999864    36899999999999999999998753

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2e-15  Score=105.77  Aligned_cols=57  Identities=37%  Similarity=0.662  Sum_probs=51.3

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEec--CCCeEEEEECCeEEEeeCCcEEeecCC
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV--DKNWYEGEHNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~--~~~Ww~g~~~g~~G~~P~nyv~~~~~~  121 (225)
                      .++|||||.++    +.+||+|++||+|.|+.+.  +.+||.++++|+.||||+|||+.+...
T Consensus         7 ~~rAlydy~~~----~~~ELs~~~Gd~v~Vl~~~~~~~~w~~~~~~g~~G~~P~~Yve~~~~~   65 (93)
T d1uffa_           7 GYRALYPFEAR----NHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSS   65 (93)
T ss_dssp             CEEESSCBCCC----SSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETTTEEECCSS
T ss_pred             EEEECccCCCC----CCCCccCcCCCEEEEEEeccCCCCEEEEEeCCcEEEEchHHEEECCCC
Confidence            47999999999    8999999999999999765  467999999999999999999998643

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=3e-15  Score=104.57  Aligned_cols=58  Identities=16%  Similarity=0.233  Sum_probs=52.1

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecC----CCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVD----KNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~----~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ...++|+|+|.++    ..+||+|++||+|.|+++.+    .+||.++.+|+.||||+|||+++..
T Consensus        17 ~~~~~a~~~f~a~----~~~eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~~g~~G~~P~~yv~~~~~   78 (92)
T d1ug1a_          17 EKLFQAERNFNAA----QDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNP   78 (92)
T ss_dssp             GGEEEESSCCCCC----SSSCCCCCTTCEEEEEESCCTTSCSSEEEEECSSSEEEEEGGGEEECCC
T ss_pred             CeEEEEcCCcCCC----CCCeEEEecccEEEEEEcccccccCCceEEEecccEEEEEhhhceecCC
Confidence            3457899999999    78999999999999998764    6899999999999999999998754

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=8.1e-17  Score=107.37  Aligned_cols=59  Identities=27%  Similarity=0.402  Sum_probs=51.9

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCe-EEEeeCCcEEeecC
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAM-IGLFPFNYVEIIPY  120 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~-~G~~P~nyv~~~~~  120 (225)
                      ..++|+|+|+|.++    +.+||+|++||+|.|+++.+++||.|++++. .||||+|||+.+..
T Consensus         5 ~~~~v~Aly~f~a~----~~~eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~fP~~yv~~~~~   64 (71)
T d2hspa_           5 FKCAVKALFDYKAQ----REDELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVN   64 (71)
T ss_dssp             SSSCEECCSCCCCS----SSSSCCCCTTCEEBSCCCBTTTEECCBCSSCCSCCEETTTCCSCSC
T ss_pred             CcEEEEEcccCCcC----CcCCccCCCCCEEEEEEecCCCEEEEEECCeEEEEEchHHeEEcCC
Confidence            45679999999999    7889999999999999999999999996554 56999999998754

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=3.1e-15  Score=99.54  Aligned_cols=57  Identities=25%  Similarity=0.402  Sum_probs=49.8

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEec-CCCeEEEEE-CCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-DKNWYEGEH-NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-~~~Ww~g~~-~g~~G~~P~nyv~~~~~  120 (225)
                      ..|+|+|||.++    +.+||+|++||+|.|+.+. +.+||.++. +|+.||||.|||+.+..
T Consensus         7 ~~~~Alydy~a~----~~~ELs~~~Gd~i~vl~~~~~~~W~~~~~~~g~~G~~P~~yve~~~~   65 (71)
T d1k9aa1           7 TECIAKYNFHGT----AEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG   65 (71)
T ss_dssp             CEEEESSCBCCS----SSSBCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCC
T ss_pred             CEEEEccCCCCC----CCCCccCCCCCEEEEeEeccCCCEEEEEeCCCCEEEEchHHeEEccc
Confidence            358999999999    7899999999999998875 557999986 48999999999998754

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.8e-16  Score=104.49  Aligned_cols=58  Identities=28%  Similarity=0.459  Sum_probs=52.4

Q ss_pred             cceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcEEeec
Q psy15850         58 RRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv~~~~  119 (225)
                      ....++|+|||.++    +.+||+|++||+|.|+.+.+.+||.++ .+|+.||||+|||+.+.
T Consensus         7 ~~~~v~Alydy~a~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   65 (67)
T d1awwa_           7 ELKKVVALYDYMPM----NANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CCCEEEBSSCCCCS----SSSSCCCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSC
T ss_pred             CCEEEEECcCCCCC----CcCCcCCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEECc
Confidence            45568999999999    889999999999999999889999998 57899999999998764

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=7e-16  Score=102.03  Aligned_cols=56  Identities=29%  Similarity=0.460  Sum_probs=50.5

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEECCeEEEeeCCcEEeecC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~~g~~G~~P~nyv~~~~~  120 (225)
                      ..++|+|||.++    ..+||+|++||+|.|++++ ++||.|+.+|+.||||+|||+.+..
T Consensus         9 ~~~vAl~~y~~~----~~~eLs~~~Gd~v~vl~~~-~~Ww~~~~~g~~G~vP~~yv~~~~~   64 (69)
T d1uhfa_           9 EEYIALYPYSSV----EPGDLTFTEGEEILVTQKD-GEWWTGSIGDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             EEEECSSCBCCS----SSSBCCBCTTCEEEECEEE-TTEEEECSTTCCEEECGGGCEECCC
T ss_pred             cEEEECccCCCC----CcCCcCCCCCCEEEEEEec-CCEEEEEECCcEEEEchhhEEECCC
Confidence            457899999999    7889999999999999874 5799999999999999999998753

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=2.7e-15  Score=100.72  Aligned_cols=58  Identities=14%  Similarity=0.109  Sum_probs=51.9

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE------CCeEEEeeCCcEEeecCC
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH------NAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~------~g~~G~~P~nyv~~~~~~  121 (225)
                      ..++|+|||.+.    ..+||+|++||+|.|+++.+.+||.++.      +|+.||||+|||+++..+
T Consensus         8 ~~~~al~dy~~~----~~~eLs~~~Gd~i~vl~~~~~~Ww~v~~~~~~~~~g~~G~vP~~yve~~~~p   71 (74)
T d1wfwa_           8 STMTVIKDYYAL----KENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPFSGP   71 (74)
T ss_dssp             CEEECCSCBCCC----SSSCCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGGCCBCCST
T ss_pred             CEEEEeEEECCC----CCCCccCccCCEEEEEEEcCCCCEEEEeCccCCcCCeeeEEchHHeEECCCC
Confidence            468899999999    7889999999999999999999999984      468999999999987643

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.6e-15  Score=97.90  Aligned_cols=55  Identities=31%  Similarity=0.509  Sum_probs=49.7

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEEE--CCeEEEeeCCcEEeec
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEIIP  119 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~~--~g~~G~~P~nyv~~~~  119 (225)
                      ..+|+|||.++    ..+||+|++||+|.|+++.+++||.|+.  +|+.||||+|||+++.
T Consensus         4 ~~vAlydf~~~----~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~~~~   60 (64)
T d1fmka1           4 TFVALYDYESR----TETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD   60 (64)
T ss_dssp             EEEESSCBCCC----SSSBCCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             EEEECccCCCc----CcCCcCCCCCCEEEEEEEcCCCcEEEEECCCCCEEEEehHHeEECc
Confidence            35799999999    7899999999999999988889999984  5799999999999864

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.6e-15  Score=103.82  Aligned_cols=56  Identities=27%  Similarity=0.443  Sum_probs=49.3

Q ss_pred             EEEEeecccCCCCCCCCccccccCCCeEEEEEec---------------CCCeEEEEE--CCeEEEeeCCcEEeecC
Q psy15850         61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV---------------DKNWYEGEH--NAMIGLFPFNYVEIIPY  120 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~---------------~~~Ww~g~~--~g~~G~~P~nyv~~~~~  120 (225)
                      .++|||+|.+.    ..+||+|++||+|.|+.+.               +.|||.|+.  +|+.||||+|||+.+..
T Consensus         5 ~~raly~y~~~----~~~eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~nYVe~i~~   77 (83)
T d1phta_           5 QYRALYDYKKE----REEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGR   77 (83)
T ss_dssp             EEEECSCBCCS----STTBCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             EEEEcCccCCC----CCCcccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEehhhEEEcCC
Confidence            47899999999    7899999999999999653               468999984  78999999999999854

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.54  E-value=3.4e-15  Score=94.81  Aligned_cols=52  Identities=21%  Similarity=0.343  Sum_probs=44.5

Q ss_pred             EEEeecccCCCCCCCCccccccCCCeEEEEEecCCC-eEEEE--ECCeEEEeeCCcEEe
Q psy15850         62 LQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKN-WYEGE--HNAMIGLFPFNYVEI  117 (225)
Q Consensus        62 ~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~-Ww~g~--~~g~~G~~P~nyv~~  117 (225)
                      +||||||.++    +.+||+|++||+|.|+.+.+.+ ||.+.  .+|+.|+||+|||+.
T Consensus         2 aralydf~a~----~~~ELs~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~nyvev   56 (56)
T d1zuua1           2 NKVLYAYVQK----DDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI   56 (56)
T ss_dssp             CEECSCBCCC----STTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEEC
T ss_pred             CEEeeeeCCC----CCCEeeECCCCEEEEEEEecCCCcEEEeCCCCceEEEEehhhEEC
Confidence            5799999999    7889999999999999876654 56555  478999999999973

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.53  E-value=4.1e-15  Score=101.94  Aligned_cols=56  Identities=30%  Similarity=0.534  Sum_probs=48.5

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEec-----CCCeEEEEE----------CCeEEEeeCCcEEee
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQV-----DKNWYEGEH----------NAMIGLFPFNYVEII  118 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~-----~~~Ww~g~~----------~g~~G~~P~nyv~~~  118 (225)
                      ...++|+|||.++    +.+||+|++||+|.|+.+.     +++||.|..          +|+.||||+|||+.+
T Consensus        12 ~~~~~Alydy~a~----~~~ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~nyVe~i   82 (83)
T d1bb9a_          12 MFKVQAQHDYTAT----DTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV   82 (83)
T ss_dssp             CEEEEESSCBCCS----STTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             CEEEEEceeECCC----CCCEecCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEchhHeEEc
Confidence            3568999999999    7889999999999999764     368999974          357899999999986

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.53  E-value=7.5e-15  Score=102.64  Aligned_cols=55  Identities=18%  Similarity=0.353  Sum_probs=48.2

Q ss_pred             ccceEEEEeecccCCCCCCCCcc-------ccccCCCeEEEEEecCCCeEEEEE---CCeEEEeeCCcE
Q psy15850         57 RRRKYLQELHDISSRRHTDNFTE-------LSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYV  115 (225)
Q Consensus        57 ~~~~~~~al~d~~~~~~~~~~~e-------Ls~~~Gdii~v~~~~~~~Ww~g~~---~g~~G~~P~nyv  115 (225)
                      +...+|+|+|||++.    ..++       |+|++||+|.|+.+.+++||.|++   +|+.||||++++
T Consensus        19 p~~~~vrAlydY~~~----~dd~~P~~~~~LsF~~GDii~v~~~~d~~WW~gr~~~~~g~~G~~PS~~~   83 (96)
T d1t0ha_          19 PVAFAVRTNVRYSAA----QEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVK   83 (96)
T ss_dssp             CCCEEEEESSCBCCC----GGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHH
T ss_pred             CccEEEEEeeccCCC----CCCCCccccccccCCCCCEEEEeeeeCCCceEEEEcCCCCCEEEecCcHH
Confidence            345679999999999    5555       999999999999999999999997   578999999874

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=8.7e-15  Score=95.68  Aligned_cols=56  Identities=29%  Similarity=0.518  Sum_probs=48.6

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEeec
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEIIP  119 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~~~  119 (225)
                      +..++|+|||.++    ..+||+|++||+|.|+++ +++||.+.  .+|+.|+||+|||+.++
T Consensus         4 ~~~vvAlydy~~~----~~~eLs~~~Gd~i~v~~~-~~~ww~~~~~~~g~~G~vP~~yv~~~~   61 (65)
T d1qcfa1           4 RIIVVALYDYEAI----HHEDLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSNYVARVD   61 (65)
T ss_dssp             CCEEEESSCBCCC----STTBCCBCTTCEEEEEEC-CTTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             cEEEEECCcCCCC----CcCccCCCCCCEEEEEEE-CCCCEEEEEccCCCEEEEchHHeEECc
Confidence            4568899999999    788999999999999986 45788877  36899999999999874

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.52  E-value=1.6e-14  Score=95.30  Aligned_cols=58  Identities=22%  Similarity=0.420  Sum_probs=47.1

Q ss_pred             EEEEeecccCCCCC--CCCccccccCCCeEEEEEe-cCCCeEEEEE--CCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHT--DNFTELSFKKGDIIFVRRQ-VDKNWYEGEH--NAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~--~~~~eLs~~~Gdii~v~~~-~~~~Ww~g~~--~g~~G~~P~nyv~~~  118 (225)
                      .++|+++|.+..+.  ...+||+|++||+|.|+++ .+.+||.|+.  +|+.||||+|||++.
T Consensus         6 k~~a~~~y~~~~~~~~~~~~eLsf~~GD~i~Vl~~~~~~gWw~G~~~~~g~~G~fP~nyVePy   68 (69)
T d1gcqc_           6 KMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   68 (69)
T ss_dssp             EEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             cEEEeeeEeccCCCCCCCCCEeeEcCCCEEEEEEEecCCCEEEEEECCCCCEEEEeHHHEEEc
Confidence            46789888764221  1567999999999999975 4679999995  689999999999974

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.51  E-value=1.3e-15  Score=107.47  Aligned_cols=58  Identities=24%  Similarity=0.450  Sum_probs=48.4

Q ss_pred             EEEEeecccCCCCCC-CCccccccCCCeEEEEEecCCCeEEEEE------CCeEEEeeCCcEEee
Q psy15850         61 YLQELHDISSRRHTD-NFTELSFKKGDIIFVRRQVDKNWYEGEH------NAMIGLFPFNYVEII  118 (225)
Q Consensus        61 ~~~al~d~~~~~~~~-~~~eLs~~~Gdii~v~~~~~~~Ww~g~~------~g~~G~~P~nyv~~~  118 (225)
                      +|+|+|||.++.+.. ...||+|++||+|.|+.+.+.+||.|+.      +|+.||||+|||+..
T Consensus         3 ~vrAlydy~~~~d~~~~~~eLsf~kGdil~V~~~~d~~WW~~~~~~~~~~~g~~G~~Psnyv~e~   67 (96)
T d1kjwa1           3 YIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVER   67 (96)
T ss_dssp             EEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             EEEEcccCcCCcCCCCCCccceEcCCCEEEEeeeccCceEEEEEccCCCCCCCEeEEeccceeee
Confidence            689999999983110 1348999999999999999999999984      578999999999753

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.4e-14  Score=93.86  Aligned_cols=54  Identities=24%  Similarity=0.549  Sum_probs=46.9

Q ss_pred             ceEEEEeecccCCCCCCCCccccccCCCeEEEEEecCCCeEEEE--ECCeEEEeeCCcEEe
Q psy15850         59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGE--HNAMIGLFPFNYVEI  117 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~~~~~Ww~g~--~~g~~G~~P~nyv~~  117 (225)
                      ...++|+|||.++    ..+||+|++||+|.|+++.+ +||.++  .+|+.||||+|||+.
T Consensus         6 ~~~~~al~dy~a~----~~~eLs~~~Gd~i~v~~~~~-~ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1           6 DNLVIALHSYEPS----HDGDLGFEKGEQLRILEQSG-EWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             TCEEEESSCBCCC----STTBCCBCTTCEEEEEECCS-SEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CcEEEECCCCCcC----CcCCcCCCCCCEEEEeEEcC-CCEEEEeccCCeEeEEcHHHEEe
Confidence            4568999999999    78899999999999998865 577766  568999999999975

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1e-14  Score=102.46  Aligned_cols=64  Identities=22%  Similarity=0.403  Sum_probs=51.0

Q ss_pred             cceEEEEeecccCCCC--CCCCccccccCCCeEEEEEecC-CCeEEEE-ECCeEEEeeCCcEEeecCC
Q psy15850         58 RRKYLQELHDISSRRH--TDNFTELSFKKGDIIFVRRQVD-KNWYEGE-HNAMIGLFPFNYVEIIPYD  121 (225)
Q Consensus        58 ~~~~~~al~d~~~~~~--~~~~~eLs~~~Gdii~v~~~~~-~~Ww~g~-~~g~~G~~P~nyv~~~~~~  121 (225)
                      +..+|+|+|||.++..  ....+||+|++||+|.|+.+.+ ++||.+. .+|+.||||+|||+.+...
T Consensus        16 ~~~~~~Alydy~~~~~~~~~~e~ELsf~~Gd~i~v~~~~~~~gW~~~~~~~G~~G~~P~nyve~~~~~   83 (96)
T d1wiea_          16 KVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDN   83 (96)
T ss_dssp             CEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCCSC
T ss_pred             CceEEEEeeeecCcccCCCCCCcEeeEcCCCEEEEEEeeCCCceEEEEeCCCCEEEEehHHeEECCCc
Confidence            4567999999998642  1135799999999999997654 5688887 5899999999999988643

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.7e-14  Score=102.10  Aligned_cols=56  Identities=18%  Similarity=0.359  Sum_probs=49.1

Q ss_pred             eEEEEeecccCCCCCCCCccccccCCCeEEEEEe---cCCCeEEEEECC--------eEEEeeCCcEEeec
Q psy15850         60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQ---VDKNWYEGEHNA--------MIGLFPFNYVEIIP  119 (225)
Q Consensus        60 ~~~~al~d~~~~~~~~~~~eLs~~~Gdii~v~~~---~~~~Ww~g~~~g--------~~G~~P~nyv~~~~  119 (225)
                      .+++|+|||.++    +.+||+|++||+|.|+.+   .+.+||.|++.|        +.||||+|||+.+.
T Consensus        22 ~~~~Alydy~~~----~~~eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~~~   88 (106)
T d1i1ja_          22 SMAVALQDYMAP----DCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQ   88 (106)
T ss_dssp             EEEEESSCBCCS----STTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEE
T ss_pred             eEEEEccccCCC----CCCCccCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEEcc
Confidence            468999999999    889999999999999987   347899998644        58999999999875

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.36  E-value=2.1e-13  Score=102.87  Aligned_cols=52  Identities=15%  Similarity=0.343  Sum_probs=46.5

Q ss_pred             EEEEeecccCCCCCCCCcc-------ccccCCCeEEEEEecCCCeEEEEE---CCeEEEeeCCcEE
Q psy15850         61 YLQELHDISSRRHTDNFTE-------LSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYVE  116 (225)
Q Consensus        61 ~~~al~d~~~~~~~~~~~e-------Ls~~~Gdii~v~~~~~~~Ww~g~~---~g~~G~~P~nyv~  116 (225)
                      +|+|+|||.+.    ..++       |+|++||+|.|+++.+.+||.|+.   +|+.||||++|+.
T Consensus        25 ~vra~~dy~~~----~d~~~p~~~~~LsF~kGDii~V~~~~d~~WW~gr~~~~~g~~G~iPS~~~~   86 (145)
T d1vyva1          25 AVKTNVSYCGA----LDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRL   86 (145)
T ss_dssp             EEEESSCBCTT----SCCSCSSTTCBCCBCTTCEEEEEEEEETTEEEEEESSTTCCCEEEECHHHH
T ss_pred             EEEEeeeeCCc----cCCcCCcccccccCcCCCEEEEeeccCCCcEEEEEcCCCCceeEeCCchhh
Confidence            69999999999    4554       999999999999999999999996   6899999998753

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=3.1e-13  Score=95.25  Aligned_cols=80  Identities=19%  Similarity=0.230  Sum_probs=64.6

Q ss_pred             ECCeEEEeeCCcEEeecCCCCCCCcCCCCcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        103 HNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       103 ~~g~~G~~P~nyv~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      .+|+.|+||++||+.+........+.......++|+|+|.++.++||+|++||+|.++.. ..++||...++.-+.+++.
T Consensus         5 ~~G~~G~~P~~yv~~~~~~~~~~~~~~~~~~~~~Alydy~a~~~~ELsf~~Gd~i~Vl~~-~~~gWw~g~~~g~~G~~P~   83 (98)
T d1udla_           5 SSGQKGWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSKGQLINVMNK-DDPDWWQGEINGVTGLFPS   83 (98)
T ss_dssp             CSSCCSSCCCCCCCCCSCCCCCCCSCCCCSEEEEESSCCCCSSTTSCCCCTTCEEEECBC-CSSSEEBCBSSSCBCCEET
T ss_pred             CCCceeeEcccceeECCCcccccCCCCCCccEEEEccCCCCCCCCEeeEcCCCEEEEeEe-cCCCeEEEEECCeEEEEch
Confidence            367899999999999876655555444556679999999999999999999999999987 5678887777776666655


Q ss_pred             h
Q psy15850        183 E  183 (225)
Q Consensus       183 ~  183 (225)
                      +
T Consensus        84 n   84 (98)
T d1udla_          84 N   84 (98)
T ss_dssp             T
T ss_pred             H
Confidence            3

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.17  E-value=2.2e-11  Score=90.35  Aligned_cols=57  Identities=11%  Similarity=0.230  Sum_probs=46.1

Q ss_pred             ceEEEEeecccCCCCCCC---CccccccCCCeEEEEEecCCCeEEEEE---CCeEEEeeCCcE
Q psy15850         59 RKYLQELHDISSRRHTDN---FTELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYV  115 (225)
Q Consensus        59 ~~~~~al~d~~~~~~~~~---~~eLs~~~Gdii~v~~~~~~~Ww~g~~---~g~~G~~P~nyv  115 (225)
                      .-+|+|+|||.+..+...   ...|+|++||+|.|+++.+++||.|+.   +|..|+||++|+
T Consensus        23 ~~~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d~~WW~~r~~~~~~~~G~iPs~~~   85 (136)
T d1vyua1          23 AFAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQR   85 (136)
T ss_dssp             CEEEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHH
T ss_pred             eEEEEEeeccCCCCCCCCcccCcccCCCCCCEEEEEeccCCCcEEEEeccCCCceeccCchHH
Confidence            346999999999842210   123999999999999999999999995   467899999884

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=7.6e-08  Score=59.96  Aligned_cols=50  Identities=24%  Similarity=0.312  Sum_probs=37.8

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .|+|+|+|.+..++||+|++||.|+++......+||....+.-..+++.+
T Consensus         2 ~a~Alydy~a~~~~ELs~~~Gd~v~v~~~~~~~~W~~~~~~g~~G~vP~n   51 (56)
T d1gria1           2 EAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKN   51 (56)
T ss_dssp             EEEECSCBCCCSSSCCCBCTTCEEEC------CCEEEEESSSCEEEEEGG
T ss_pred             EEEEeeCCCCCCCCCcCCCCCCEEEEEeccCCCCeEEEEECCcEEEEehh
Confidence            48999999999999999999999999987667788877777777777654

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=2e-07  Score=58.39  Aligned_cols=49  Identities=16%  Similarity=0.208  Sum_probs=41.6

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..+++|+|++||+|.+++. ..++||....+.-..+++.+
T Consensus         4 r~~Alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~~   52 (58)
T d1uj0a_           4 RVRALYDFEAVEDNELTFKHGELITVLDD-SDANWWQGENHRGTGLFPSN   52 (58)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             EEEECCCCCCCCcCCcCCCCCCEEEEeEE-eCCCEEEEEECCeEEEEehH
Confidence            58999999999999999999999999987 56788877777766766654

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=2.8e-07  Score=56.64  Aligned_cols=48  Identities=10%  Similarity=0.084  Sum_probs=40.2

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccch
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~  182 (225)
                      .++|+++|.++.+++|+|.+||+|.++.. ...|||....+.-..+++.
T Consensus         2 ~yval~~y~a~~~~eLs~~~Gd~v~vl~~-~~~gWw~g~~~g~~G~~P~   49 (53)
T d1wlpb1           2 PYVAIKAYTAVEGDEVSLLEGEAVEVIHK-LLDGWWVIRKDDVTGYFPS   49 (53)
T ss_dssp             EEEECSCBCCCSSSBCCBCTTCEEEEEEC-CTTSSEEEESSSCEEEECS
T ss_pred             eEEEeeeECCCCCCEecCCCCCEEEEEee-cCCceEEEEECCcEeEecH
Confidence            36899999999999999999999999987 6678887777766666654

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=4.2e-07  Score=59.44  Aligned_cols=53  Identities=21%  Similarity=0.173  Sum_probs=43.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      +...++|+|+|.+..++||+|++||+|.++.....++||...++.-+.+++.+
T Consensus         9 p~~~~~alydy~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~g~~G~~P~~   61 (72)
T d1ugva_           9 PFRKAKALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPEN   61 (72)
T ss_dssp             SCCCEEESSCBCCCSSSBCCBCTTCEEBSCCBCSSTTEEEEESSSCEEEEEGG
T ss_pred             CCEEEEEcccCCCCCCCEecCCCCCEEEEeeccCCCCEEEEEeCCCEEEEchH
Confidence            34569999999999999999999999999987666788877666666666553

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=3.7e-07  Score=58.14  Aligned_cols=52  Identities=13%  Similarity=0.213  Sum_probs=41.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccc--cccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~~~f~~~~~l~e~~~~~  183 (225)
                      .+.+.|+|+|.++.++||+|++||+|.++....  ..+||....+.-..+++.+
T Consensus         4 ~g~v~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~gW~~g~~~g~~G~~P~~   57 (63)
T d1ycsb2           4 KGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRN   57 (63)
T ss_dssp             GGEEEESSCBCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEETTEEEEEEGG
T ss_pred             CCEEEEeeCCCCCCCCCcCCCCCCEEEEEEecCCCCCCEEEEEECCeEEEEchH
Confidence            467899999999999999999999999997643  3579987767666666553

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=3.3e-07  Score=58.14  Aligned_cols=50  Identities=12%  Similarity=0.112  Sum_probs=42.0

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.+++. .+.+||....+.-..+++.+
T Consensus         6 ~~v~Aly~y~a~~~~eLsf~~Gd~i~vl~~-~~~~Ww~g~~~g~~G~~P~~   55 (62)
T d1k4us_           6 SQVEALFSYEATQPEDLEFQEGDIILVLSK-VNEEWLEGESKGKVGIFPKV   55 (62)
T ss_dssp             EEEECCSCBCCCSSSBCCBCSSCEEEEEEE-SSSSCEEEECSSCEEEECGG
T ss_pred             CEEEECCCCCCCCcCCcCCCCCCEEEEeEE-cCCCEEEEEECCcEEEEchH
Confidence            468999999999999999999999999987 45788877777777776654

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.14  E-value=4.6e-07  Score=56.48  Aligned_cols=49  Identities=20%  Similarity=0.165  Sum_probs=40.2

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .|+|+|+|.++++++|+|++||+|.+++. .+++||.+..+.-..+++.+
T Consensus         3 yarAlydy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~~g~~G~~P~~   51 (57)
T d1utia_           3 WARALYDFEALEEDELGFRSGEVVEVLDS-SNPSWWTGRLHNKLGLFPAN   51 (57)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             EEEECcCCCCCCcCCcCCCCCCEEEEeEE-cCCCEEEEEECCcEEEEEHH
Confidence            47899999999999999999999999986 56678876666666665543

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.13  E-value=5.3e-07  Score=56.41  Aligned_cols=50  Identities=12%  Similarity=0.126  Sum_probs=40.7

Q ss_pred             cEEEcccccCCCccccccccccceEEecccc-cccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~f~~~~~l~e~~~~~  183 (225)
                      .|+|+|+|.+.+++||+|++||+|.++.... .++||....+.-..+++.+
T Consensus         3 ~~~Alydy~a~~~~ELs~~~Gd~v~vl~~~~~~~~W~~~~~~g~~G~vP~~   53 (58)
T d1oota_           3 KAVALYSFAGEESGDLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPAN   53 (58)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEETTEEEEEEGG
T ss_pred             eEEEccCCCCCCCCCccCCCCCEEEEEEeecCCCCEEEEEECCcEEEEcHH
Confidence            5899999999999999999999999998743 4678876666666666553

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.11  E-value=5.4e-07  Score=56.15  Aligned_cols=50  Identities=14%  Similarity=0.142  Sum_probs=39.8

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+..++||+|++||+|.++.....++||....+.-..+++.+
T Consensus         2 ~~vAlydy~a~~~~eLs~~~Gd~i~vl~~~~~~~W~~~~~~g~~G~~P~~   51 (57)
T d1opka1           2 LFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSN   51 (57)
T ss_dssp             EEEESSCBCCCSTTBCCBCTTCEEEEEEECTTSSEEEEECSSCEEEEEGG
T ss_pred             EEEECccCCCCCcCCcCCCCCCEEEEeEecCCCCEEEEEECCCEeEEchh
Confidence            37899999999999999999999999987566667755555556666543

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.11  E-value=6e-07  Score=55.50  Aligned_cols=49  Identities=10%  Similarity=0.199  Sum_probs=40.4

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.++.+++|+|++||.|.+++. ..++||....+.-..+++.+
T Consensus         2 ~~vAl~dy~~~~~~eLs~~~Gd~v~v~~~-~~~~Ww~g~~~g~~G~~P~~   50 (55)
T d1u06a1           2 LVLALYDYQEKSPREVTMKKGDILTLLNS-TNKDWWKVEVNDRQGFVPAA   50 (55)
T ss_dssp             EEEECSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             EEEECCCCCCCCcCCccCCCCCEEEEeEE-cCCCEEEEEECCeEEEEeHH
Confidence            37899999999999999999999999987 56788876666666666553

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=6e-07  Score=56.13  Aligned_cols=49  Identities=12%  Similarity=0.068  Sum_probs=40.9

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+.++++|+|++||+|.++.. .+++||....+.-..+++.+
T Consensus         4 ~~~al~dy~~~~~~eLs~~~Gd~i~vl~~-~~~~Ww~~~~~g~~G~~P~~   52 (58)
T d1ng2a1           4 TYRAIADYEKTSGSEMALSTGDVVEVVEK-SESGWWFCQMKAKRGWIPAS   52 (58)
T ss_dssp             EEECSSCBCCSSTTCCCBCTTCEEEEEEC-CTTSCCEEEECCCCCCCCGG
T ss_pred             EEEECccCcCCCCCCcCCCCCCEEEEEEe-cCCCeEEEEECCCCcEEcHh
Confidence            47899999999999999999999999987 56788876666666666654

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=8.1e-07  Score=55.11  Aligned_cols=48  Identities=15%  Similarity=0.192  Sum_probs=39.9

Q ss_pred             EEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        135 ARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       135 ~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ++|+|+|.+..+++|+|++||+|.+++. .+++||....+.-..+++.+
T Consensus         4 v~Alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~~   51 (56)
T d1gcqa_           4 VQALFDFDPQEDGELGFRRGDFIHVMDN-SDPNWWKGACHGQTGMFPRN   51 (56)
T ss_dssp             EEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEEEETTEEEEEEGG
T ss_pred             EEECcCCCcCCcCCcCCCCCCEEEEEEe-cCCCEEEEEECCeEEEEEHh
Confidence            6899999999999999999999999987 46788877777666666553

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.3e-06  Score=62.34  Aligned_cols=51  Identities=10%  Similarity=0.044  Sum_probs=43.5

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchhH
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEE  184 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~e  184 (225)
                      ..++|+|+|.+..++||+|++||+|.|+.. ..+|||.+..++-..|++.+-
T Consensus        15 ~~~~alydy~a~~~dELs~~~Gd~i~Vl~~-~~~gWw~g~~~g~~G~~P~~y   65 (118)
T d1ng2a2          15 EPYVAIKAYTAVEGDEVSLLEGEAVEVIHK-LLDGWWVIRKDDVTGYFPSMY   65 (118)
T ss_dssp             EEEEESSCBCCCSTTBCCBCTTCEEEEEEC-CTTSEEEEEETTEEEEEEGGG
T ss_pred             cEEEECcCCCCCCCCEecCCCCCEEEEeEe-cCCCeEEEEECCeEEEEehhh
Confidence            468999999999999999999999999976 668899877777777776644

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=6.6e-07  Score=59.08  Aligned_cols=51  Identities=18%  Similarity=0.070  Sum_probs=42.4

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchhH
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEEE  184 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~e  184 (225)
                      ..++|+|+|.+..++||+|++||+|.++.. ...+||...++.-+.+++.+-
T Consensus        11 ~~~rAlydy~a~~~~eLs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~~y   61 (76)
T d1ujya_          11 LIVKARFNFKQTNEDELSVCKGDIIYVTRV-EEGGWWEGTLNGRTGWFPSNY   61 (76)
T ss_dssp             EEEECCSCBCCSSTTSCCBCSSCCEEESSC-CSSSCEEEEETTEEEEECTTT
T ss_pred             EEEEECccCCCCCCCCccCCCCCEEEEeEE-cCCCEEEEEECCcEEEEchHH
Confidence            357899999999999999999999999987 567888777777777776643

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=98.03  E-value=1.3e-06  Score=54.62  Aligned_cols=50  Identities=14%  Similarity=0.175  Sum_probs=40.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.++.. ...+||....+.-..+++.+
T Consensus         3 ~~~~Alydy~~~~~~eLsf~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~~   52 (58)
T d1sema_           3 KFVQALFDFNPQESGELAFKRGDVITLINK-DDPNWWEGQLNNRRGIFPSN   52 (58)
T ss_dssp             CEEEESSCBCCSSTTBCCBCTTCEEEEEEC-SSSSEEEEEETTEEEEEEGG
T ss_pred             EEEEECCCCCcCCcCCcCCCCCCEEEEeEE-cCCCEEEEEECCeEEEEEhh
Confidence            347899999999999999999999999987 56778876666666666543

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.5e-06  Score=56.53  Aligned_cols=51  Identities=16%  Similarity=0.216  Sum_probs=39.2

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchh-hhhhccch
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRN-EIKELISE  182 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~-~l~e~~~~  182 (225)
                      ...|+|+|+|.+.+++||+|++||+|.++......+||....+ .-..+++.
T Consensus         6 g~~~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~W~~~~~~~g~~G~~P~   57 (71)
T d1k9aa1           6 GTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPA   57 (71)
T ss_dssp             TCEEEESSCBCCSSSSBCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEG
T ss_pred             CCEEEEccCCCCCCCCCccCCCCCEEEEeEeccCCCEEEEEeCCCCEEEEch
Confidence            4569999999999999999999999999987556677754333 34555554

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.9e-06  Score=56.47  Aligned_cols=50  Identities=10%  Similarity=0.057  Sum_probs=40.7

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..++||+|++||+|.+++.  .++||...++.-+.+++.+
T Consensus        10 ~~~~~alydy~a~~~~ELs~~~Gd~i~vl~~--~~~ww~g~~~g~~G~fP~~   59 (74)
T d1j3ta_          10 NLKAQALCSWTAKKDNHLNFSKHDIITVLEQ--QENWWFGEVHGGRGWFPKS   59 (74)
T ss_dssp             CCEEEESSCBCCCSTTBCCBCTTCEEEEEEE--CSSEEEEESTTCCCEEEGG
T ss_pred             CeEEEEccCCCCCCCCEecCCCCCEEEEEEc--cCCeEEEEECCcEEEEchh
Confidence            3568999999999999999999999999976  4567766667666666653

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.6e-06  Score=52.87  Aligned_cols=49  Identities=16%  Similarity=0.167  Sum_probs=37.1

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccc--cchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR--PVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f--~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+.+++||+|++||++.++.. ..++||.  ...+.-..+++.+
T Consensus         2 l~vAl~dy~a~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~~~~~~g~~G~vP~~   52 (57)
T d1efna_           2 LFVALYDYEAITEDDLSFHKGEKFQILNS-SEGDWWEARSLTTGETGYIPSN   52 (57)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEC-SSCSEEEEEETTTTEEEEEEGG
T ss_pred             EEEECCCCCCCCcCCcCCCCCCEEEEEEe-cCCCCEEEEECCCCCEEEEeHH
Confidence            47899999999999999999999999987 4445553  3345555555543

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.6e-06  Score=56.43  Aligned_cols=49  Identities=20%  Similarity=0.221  Sum_probs=38.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhh-ccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKE-LISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e-~~~~  182 (225)
                      ..++|+|+|.+.++++|+|++||+|.++.. ..++||...++.-.. +++.
T Consensus         7 ~~v~Aly~f~a~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~~~~~G~fP~   56 (71)
T d2hspa_           7 CAVKALFDYKAQREDELTFIKSAIIQNVEK-QEGGWWRGDYGGKKQLWFPS   56 (71)
T ss_dssp             SCEECCSCCCCSSSSSCCCCTTCEEBSCCC-BTTTEECCBCSSCCSCCEET
T ss_pred             EEEEEcccCCcCCcCCccCCCCCEEEEEEe-cCCCEEEEEECCeEEEEEch
Confidence            468899999999999999999999999987 567888665444444 4444

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.92  E-value=2.2e-06  Score=55.87  Aligned_cols=50  Identities=10%  Similarity=0.068  Sum_probs=38.3

Q ss_pred             CcEEEcccccCC-CccccccccccceEEecccccccccccchh--hhhhccch
Q psy15850        133 GQARAKFNFVAQ-THLELSLVKESPHKYVDSEVTLQYRRPVRN--EIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~-~~~els~~~g~~v~~~~~~~~~~~~f~~~~--~l~e~~~~  182 (225)
                      ..++|+|+|.+. +.++|+|++||+|.++.....++||+..++  ..+.+++.
T Consensus         8 ~~~~Alydy~~~~~~deLsf~~Gd~i~vl~~~~~~gW~~g~~~~~g~~G~fP~   60 (72)
T d1spka_           8 QKVKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPS   60 (72)
T ss_dssp             CEEECSSCBCCSSCSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEG
T ss_pred             CEEEEeeccCCCCCCCEeeEcCCCEEEEEEeecCCCeEEEEECCCCCEEEEch
Confidence            468999999985 578999999999999977666788865433  44555554

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=2.2e-06  Score=58.54  Aligned_cols=51  Identities=16%  Similarity=0.051  Sum_probs=41.9

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccc-cccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..++||+|++||+|.|+.... .++||...++.-..+++.+
T Consensus         6 ~~~rAlydy~~~~~~ELs~~~Gd~v~Vl~~~~~~~~w~~~~~~g~~G~~P~~   57 (93)
T d1uffa_           6 SGYRALYPFEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCN   57 (93)
T ss_dssp             CCEEESSCBCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEETTEEEEEETT
T ss_pred             eEEEECccCCCCCCCCccCcCCCEEEEEEeccCCCCEEEEEeCCcEEEEchH
Confidence            46899999999999999999999999998754 4677777777766666654

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.92  E-value=2.4e-06  Score=52.80  Aligned_cols=48  Identities=8%  Similarity=0.184  Sum_probs=37.2

Q ss_pred             EEEcccccCCCccccccccccceEEecccccccccc--cchhhhhhccch
Q psy15850        135 ARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR--PVRNEIKELISE  182 (225)
Q Consensus       135 ~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f--~~~~~l~e~~~~  182 (225)
                      ++|+|+|.+.+++||+|++||+|.++.....++||.  ...+.-..+++.
T Consensus         2 aralydf~a~~~~ELs~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~   51 (56)
T d1zuua1           2 NKVLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPT   51 (56)
T ss_dssp             CEECSCBCCCSTTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEG
T ss_pred             CEEeeeeCCCCCCEeeECCCCEEEEEEEecCCCcEEEeCCCCceEEEEeh
Confidence            679999999999999999999999998755566663  334444555554

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=1.9e-06  Score=55.70  Aligned_cols=49  Identities=4%  Similarity=0.035  Sum_probs=40.8

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.+++.  +.+||+...+.-..+++.+
T Consensus         9 ~~~vAl~~y~~~~~~eLs~~~Gd~v~vl~~--~~~Ww~~~~~g~~G~vP~~   57 (69)
T d1uhfa_           9 EEYIALYPYSSVEPGDLTFTEGEEILVTQK--DGEWWTGSIGDRSGIFPSN   57 (69)
T ss_dssp             EEEECSSCBCCSSSSBCCBCTTCEEEECEE--ETTEEEECSTTCCEEECGG
T ss_pred             cEEEECccCCCCCcCCcCCCCCCEEEEEEe--cCCEEEEEECCcEEEEchh
Confidence            468999999999999999999999998865  4578877777777777654

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.1e-06  Score=58.65  Aligned_cols=53  Identities=17%  Similarity=0.120  Sum_probs=42.6

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc---cccccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV---TLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~---~~~~~f~~~~~l~e~~~~~  183 (225)
                      ....++|+|+|.+..++||+|++||+|.||+...   +.+||....+.-+.|++.+
T Consensus        16 ~~~~~~a~~~f~a~~~~eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~~g~~G~~P~~   71 (92)
T d1ug1a_          16 PEKLFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSS   71 (92)
T ss_dssp             GGGEEEESSCCCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEECSSSEEEEEGG
T ss_pred             CCeEEEEcCCcCCCCCCeEEEecccEEEEEEcccccccCCceEEEecccEEEEEhh
Confidence            3446899999999999999999999999998743   4678876666666666654

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.87  E-value=3.9e-06  Score=52.24  Aligned_cols=37  Identities=19%  Similarity=0.226  Sum_probs=32.4

Q ss_pred             cEEEcccccCCCccccccccccceEEeccccccccccc
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP  171 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~  171 (225)
                      .|+|+|+|.+..+++|+|++||+|.++.. ..++||..
T Consensus         2 ~~~Alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~   38 (58)
T d1jo8a_           2 WATAEYDYDAAEDNELTFVENDKIINIEF-VDDDWWLG   38 (58)
T ss_dssp             CEEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSSEEEE
T ss_pred             EEEEccCCCCCCcCCcCCCCCCEEEEEEE-cCCCEEEE
Confidence            48999999999999999999999999987 56677753

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.85  E-value=4.3e-06  Score=52.24  Aligned_cols=48  Identities=23%  Similarity=0.389  Sum_probs=36.7

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccc-cchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR-PVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f-~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+.++++|+|++||+|.++.. .. +||. ...+.-..+++.+
T Consensus         3 ~a~alydf~a~~~~ELs~~~Gd~i~v~~~-~~-~ww~~~~~~g~~G~~P~n   51 (59)
T d1i07a_           3 YAKSKYDFVARNSSELSVMKDDVLEILDD-RR-QWWKVRNASGDSGFVPNN   51 (59)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEECGG-GC-CEEEEECTTSCEEEEEGG
T ss_pred             EEEEccCCCCCCCCeeeEcCCCEEEEEEE-cC-CcEEEEEcCCCEEEECHH
Confidence            58999999999999999999999999976 33 5664 3455555555543

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=5.2e-06  Score=52.33  Aligned_cols=51  Identities=8%  Similarity=0.109  Sum_probs=39.1

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccc-cchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR-PVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f-~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.++.+++|+|++||+|.++.. ..++||. ...+.-..+++.+
T Consensus         6 ~~~~~al~dy~a~~~~eLs~~~Gd~i~v~~~-~~~ww~~~~~~~g~~G~~P~~   57 (62)
T d2iima1           6 DNLVIALHSYEPSHDGDLGFEKGEQLRILEQ-SGEWWKAQSLTTGQEGFIPFN   57 (62)
T ss_dssp             TCEEEESSCBCCCSTTBCCBCTTCEEEEEEC-CSSEEEEEETTTCCEEEEEGG
T ss_pred             CcEEEECCCCCcCCcCCcCCCCCCEEEEeEE-cCCCEEEEeccCCeEeEEcHH
Confidence            4568999999999999999999999999987 3445543 4455556666554

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=4.9e-06  Score=51.61  Aligned_cols=48  Identities=19%  Similarity=0.210  Sum_probs=37.4

Q ss_pred             cEEEcccccCCCccccccccccceEEeccccccccccc-chhhhhhccch
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP-VRNEIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~-~~~~l~e~~~~  182 (225)
                      .++|+|+|.++++.+|+|++||+|.++.. .+++||.. ..+.-..+++.
T Consensus         3 ~v~Alydy~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~~~~~g~~G~vP~   51 (57)
T d1ckaa_           3 YVRALFDFNGNDEEDLPFKKGDILRIRDK-PEEQWWNAEDSEGKRGMIPV   51 (57)
T ss_dssp             EEEESSCBCCSSTTBCCBCTTCEEEEEEC-SSSSEEEEECTTSCEEEEEG
T ss_pred             EEEECCCCCcCCcCCcCCCCCCEEEEEEE-cCCCeEEEEECCCCEEEEcH
Confidence            36799999999999999999999999987 55677754 34444555554

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=97.81  E-value=5.2e-06  Score=50.69  Aligned_cols=47  Identities=17%  Similarity=0.224  Sum_probs=36.1

Q ss_pred             EEEcccccCCCccccccccccceEEeccccccccccc-chhhhhhccch
Q psy15850        135 ARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP-VRNEIKELISE  182 (225)
Q Consensus       135 ~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~-~~~~l~e~~~~  182 (225)
                      .+|+|+|.+..+++|+|++||++.++.. .+.+||.. ..+.-..+++.
T Consensus         1 V~Alydy~a~~~~eLs~~~Gd~~~vl~~-~~~~Ww~~~~~~g~~G~vP~   48 (53)
T d2rn8a1           1 VIALYDYQTNDPQELALRCDEEYYLLDS-SEIHWWRVQDKNGHEGYAPS   48 (53)
T ss_dssp             EEESSCCCCSSTTBCCCCTTCEEEECCC-SCSSCEEEECTTSCEEEECG
T ss_pred             CEEeeeECCCCCCeeeECCCCEEEEeEE-cCCCeEEEEeCCCCEEEEeH
Confidence            4799999999999999999999999976 55667743 34444455544

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=7.1e-06  Score=54.32  Aligned_cols=52  Identities=17%  Similarity=0.139  Sum_probs=41.6

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccc---ccccccccchhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSE---VTLQYRRPVRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~---~~~~~~f~~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+..++||+|++||+|.+++..   ...+||...++....+++.+
T Consensus        13 ~~~~~Alydy~a~~~~ELs~~~Gd~i~vl~~~~~~~~~~W~~g~~~g~~G~vP~~   67 (79)
T d1uhca_          13 NQVYFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSN   67 (79)
T ss_dssp             SCCEEESSCBCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEESSSCEEEEEGG
T ss_pred             CEEEEECccCCCCCCCCccCCCCCEEEEEEeecCCCCCCEEEEEECCCEEEEehh
Confidence            34689999999999999999999999999753   24688877666666666653

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=6.4e-06  Score=52.78  Aligned_cols=51  Identities=16%  Similarity=0.220  Sum_probs=39.7

Q ss_pred             cCcEEEcccccCCCccccccccccceEEeccccccccccc-chhhhhhccchh
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRP-VRNEIKELISEE  183 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~-~~~~l~e~~~~~  183 (225)
                      ...++|+|+|.+.++++|+|++||++.++.. .+.+||.. ..+.-..+++.+
T Consensus         8 ~~~v~Alydy~a~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~~~~~g~~G~vP~~   59 (67)
T d1awwa_           8 LKKVVALYDYMPMNANDLQLRKGDEYFILEE-SNLPWWRARDKNGQEGYIPSN   59 (67)
T ss_dssp             CCEEEBSSCCCCSSSSSCCCCSSCEEECCCC-CSSSEECCBCTTSCBCCEETT
T ss_pred             CEEEEECcCCCCCCcCCcCCCCCCEEEEEEE-cCCCeEEEEECCCCEEEEcHH
Confidence            3568999999999999999999999999976 45667654 455555666553

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.75  E-value=1e-05  Score=55.43  Aligned_cols=52  Identities=8%  Similarity=-0.019  Sum_probs=40.8

Q ss_pred             cCcEEEcccccCCCccc-------cccccccceEEecccccccccccch---hhhhhccchhH
Q psy15850        132 EGQARAKFNFVAQTHLE-------LSLVKESPHKYVDSEVTLQYRRPVR---NEIKELISEEE  184 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~e-------ls~~~g~~v~~~~~~~~~~~~f~~~---~~l~e~~~~~e  184 (225)
                      ...+.|+|+|.+..+++       |+|++||+|.|+.. .+++||.+.+   +.-+.+++..-
T Consensus        21 ~~~vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~~~-~d~~WW~gr~~~~~g~~G~~PS~~   82 (96)
T d1t0ha_          21 AFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEK-FNNDWWIGRLVKEGCEIGFIPSPV   82 (96)
T ss_dssp             CEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEE-CSSSEEEEEESSTTCCCEEEECHH
T ss_pred             cEEEEEeeccCCCCCCCCccccccccCCCCCEEEEeee-eCCCceEEEEcCCCCCEEEecCcH
Confidence            34578999999999888       99999999999998 5567775443   45567777643

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=6.6e-06  Score=52.20  Aligned_cols=49  Identities=14%  Similarity=0.168  Sum_probs=36.8

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccccc--hhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~~  183 (225)
                      .++|+|+|.+.+++||+|++||.+.++.. ..++||...  .+.-..|++.+
T Consensus         4 ~~vAlydf~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~~~~~~g~~G~vP~~   54 (64)
T d1fmka1           4 TFVALYDYESRTETDLSFKKGERLQIVNN-TEGDWWLAHSLSTGQTGYIPSN   54 (64)
T ss_dssp             EEEESSCBCCCSSSBCCBCTTCEEEESCC-CSSSEEEEEETTTCCEEEEEGG
T ss_pred             EEEECccCCCcCcCCcCCCCCCEEEEEEE-cCCCcEEEEECCCCCEEEEehH
Confidence            47999999999999999999999999987 445566432  23345555543

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=7e-06  Score=52.59  Aligned_cols=49  Identities=16%  Similarity=0.209  Sum_probs=38.1

Q ss_pred             cEEEcccccCCCccccccccccceEEecccccccccc-cchhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR-PVRNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f-~~~~~l~e~~~~~  183 (225)
                      .++|+|+|.+.++.+|+|++||+|.++.. ...+||. ...+.-..+++.+
T Consensus         4 ~v~Alydf~a~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~~~~~g~~G~~P~~   53 (67)
T d1gl5a_           4 IVVAMYDFQATEAHDLRLERGQEYIILEK-NDLHWWRARDKYGSEGYIPSN   53 (67)
T ss_dssp             CEEECSCBCCSSSSBCCBCTTCEEEEEEC-SSSSEEEEECSSSCEEEEETT
T ss_pred             EEEECCCCCCCCcCCcCCCCCCEEEEEEe-cCCCcEEEEECCCCEEEEEhH
Confidence            47899999999999999999999999987 4556664 3455445665553

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.1e-05  Score=51.29  Aligned_cols=50  Identities=14%  Similarity=0.159  Sum_probs=37.0

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccc-cchhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR-PVRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f-~~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.++.+++|+|++||++.+++. .+++||. ...+.-..+++.+
T Consensus         5 ~~vvAlydy~~~~~~eLs~~~Gd~i~v~~~-~~~ww~~~~~~~g~~G~vP~~   55 (65)
T d1qcfa1           5 IIVVALYDYEAIHHEDLSFQKGDQMVVLEE-SGEWWKARSLATRKEGYIPSN   55 (65)
T ss_dssp             CEEEESSCBCCCSTTBCCBCTTCEEEEEEC-CTTEEEEEETTTCCEEEEEGG
T ss_pred             EEEEECCcCCCCCcCccCCCCCCEEEEEEE-CCCCEEEEEccCCCEEEEchH
Confidence            457899999999999999999999999975 3444442 3445555665553

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=8.5e-06  Score=53.97  Aligned_cols=39  Identities=18%  Similarity=0.078  Sum_probs=33.5

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccccc
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRRPV  172 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f~~  172 (225)
                      ..++|+|+|.+..++||+|++||+|.|+.. ..++||...
T Consensus         8 ~~~~al~~y~~~~~~eLs~~~Gd~i~Vl~~-~~~~Ww~g~   46 (80)
T d1ue9a_           8 EIAQVTSAYVASGSEQLSLAPGQLILILKK-NTSGWWQGE   46 (80)
T ss_dssp             EEEEECSCCCCCSTTBCCCCTTCEEEEEEE-CSSSEEEEE
T ss_pred             CEEEECcCCCCCCCCEeeEcCCCEEEEEEE-eCCCeEEEE
Confidence            458999999999999999999999999987 556777543

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.3e-05  Score=55.08  Aligned_cols=52  Identities=10%  Similarity=0.051  Sum_probs=39.1

Q ss_pred             CcCcEEEcccccCCC------ccccccccccceEEeccccccccccc-chhhhhhccch
Q psy15850        131 SEGQARAKFNFVAQT------HLELSLVKESPHKYVDSEVTLQYRRP-VRNEIKELISE  182 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~------~~els~~~g~~v~~~~~~~~~~~~f~-~~~~l~e~~~~  182 (225)
                      ....|+|+|+|.++.      ++||+|++||+|.++.....+|||.. ..+.-+.+++.
T Consensus        16 ~~~~~~Alydy~~~~~~~~~~e~ELsf~~Gd~i~v~~~~~~~gW~~~~~~~G~~G~~P~   74 (96)
T d1wiea_          16 KVHLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPS   74 (96)
T ss_dssp             CEEEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCT
T ss_pred             CceEEEEeeeecCcccCCCCCCcEeeEcCCCEEEEEEeeCCCceEEEEeCCCCEEEEeh
Confidence            345799999998753      58999999999999987556677754 34555566655

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=7.5e-06  Score=51.23  Aligned_cols=49  Identities=14%  Similarity=0.164  Sum_probs=37.4

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccccccccc--cchhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR--PVRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f--~~~~~l~e~~~~  182 (225)
                      ..++|+|+|.+.+++||+|++||+|.++.. ..++||.  ...+.-..+++.
T Consensus         4 ~~~rAl~df~~~~~~eLs~~~Gd~i~v~~~-~~~~W~~~~~~~~g~~G~vP~   54 (60)
T d1arka_           4 KIFRAMYDYMAADADEVSFKDGDAIINVQA-IDEGWMYGTVQRTGRTGMLPA   54 (60)
T ss_dssp             CCEECCSCCCCSSSSBCCCCTTCEECCSEE-CSSSEEEEECTTTCCEEEEET
T ss_pred             cEEEECccCCCCCCCCcCCCCCCEEEEEEE-cCCCEEEEEECCCCCEEEEcH
Confidence            358999999999999999999999999987 4556664  333445555554

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.61  E-value=1.6e-05  Score=53.11  Aligned_cols=40  Identities=15%  Similarity=0.065  Sum_probs=33.7

Q ss_pred             CcEEEcccccCCCccccccccccceEEeccc----ccccccccc
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSE----VTLQYRRPV  172 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~----~~~~~~f~~  172 (225)
                      ..++|+|+|.+..+++|+|++||+|.++...    ..+|||++.
T Consensus        13 ~~~~Alydy~a~~~~ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~   56 (83)
T d1bb9a_          13 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGV   56 (83)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEE
T ss_pred             EEEEEceeECCCCCCEecCcCCCEEEEEEccCCCcccCCEeEEE
Confidence            4589999999999999999999999999764    346788643

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2.2e-05  Score=50.69  Aligned_cols=50  Identities=12%  Similarity=0.157  Sum_probs=38.1

Q ss_pred             CcEEEcccccCCCccccccccccceEEecccc-ccccccc-chhhhhhccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYRRP-VRNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~f~-~~~~l~e~~~~  182 (225)
                      ..++|+|+|.++.++||+|++||+|.++.... ..+||.. ..+.-..+++.
T Consensus         7 ~~~~Alydf~~~~~~eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~~G~~G~vP~   58 (71)
T d1u5sa1           7 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPK   58 (71)
T ss_dssp             SEEEESSCCCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEET
T ss_pred             EEEEECccCCCCCCCEeeECCCCEEEEEEcccCCCCeEEEEECCCCEEEECh
Confidence            45899999999999999999999999998633 3467753 34545555554

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.51  E-value=1.9e-05  Score=50.45  Aligned_cols=50  Identities=20%  Similarity=0.244  Sum_probs=37.2

Q ss_pred             CcEEEcccccCCCc-cccccccccceEEeccc----ccccccccc-hhhhhhccch
Q psy15850        133 GQARAKFNFVAQTH-LELSLVKESPHKYVDSE----VTLQYRRPV-RNEIKELISE  182 (225)
Q Consensus       133 ~~~~a~~~~~~~~~-~els~~~g~~v~~~~~~----~~~~~~f~~-~~~l~e~~~~  182 (225)
                      ..++|+|+|.+.+. .+|+|++||+|.++...    ..++||... .+.-..+++.
T Consensus         6 ~~~~Alydy~~~~~~~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~   61 (67)
T d2v1ra1           6 EFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPY   61 (67)
T ss_dssp             EEEEESSCBCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEG
T ss_pred             EEEEECccCCCCCCCCEeCCCCCCEEEEEEeecCCCcCCCeEEEEeCCCCEEEEEH
Confidence            35899999999876 49999999999999763    246788643 4555555554

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=2.2e-05  Score=50.52  Aligned_cols=49  Identities=6%  Similarity=-0.074  Sum_probs=35.8

Q ss_pred             cEEEcccccC------CCccccccccccceEEecccccccccccc--hhhhhhccch
Q psy15850        134 QARAKFNFVA------QTHLELSLVKESPHKYVDSEVTLQYRRPV--RNEIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~~~------~~~~els~~~g~~v~~~~~~~~~~~~f~~--~~~l~e~~~~  182 (225)
                      .+.|.++|.+      .+.++|+|++||+|.+++.+..++||.+.  .+.-+.+++.
T Consensus         6 k~~a~~~y~~~~~~~~~~~~eLsf~~GD~i~Vl~~~~~~gWw~G~~~~~g~~G~fP~   62 (69)
T d1gcqc_           6 KMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPC   62 (69)
T ss_dssp             EEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEG
T ss_pred             cEEEeeeEeccCCCCCCCCCEeeEcCCCEEEEEEEecCCCEEEEEECCCCCEEEEeH
Confidence            4566666654      67789999999999999876667888754  3555555554

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=2.6e-05  Score=54.45  Aligned_cols=41  Identities=10%  Similarity=-0.050  Sum_probs=34.3

Q ss_pred             CcEEEcccccCCCccccccccccceEEecc--cccccccccch
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDS--EVTLQYRRPVR  173 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~--~~~~~~~f~~~  173 (225)
                      ..++|+|+|.+.+..+|+|++||+|.|+.+  ....+||.+.+
T Consensus        22 ~~~~Alydy~~~~~~eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~   64 (106)
T d1i1ja_          22 SMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSV   64 (106)
T ss_dssp             EEEEESSCBCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEE
T ss_pred             eEEEEccccCCCCCCCccCCCCCEEEEEEecCCCCcceEEEEe
Confidence            568999999999999999999999999976  24467886543

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.45  E-value=1.6e-05  Score=54.44  Aligned_cols=50  Identities=14%  Similarity=0.157  Sum_probs=38.6

Q ss_pred             EEEcccccCCCcc-----ccccccccceEEeccccccccccc------chhhhhhccchhHH
Q psy15850        135 ARAKFNFVAQTHL-----ELSLVKESPHKYVDSEVTLQYRRP------VRNEIKELISEEEL  185 (225)
Q Consensus       135 ~~a~~~~~~~~~~-----els~~~g~~v~~~~~~~~~~~~f~------~~~~l~e~~~~~e~  185 (225)
                      ++|+|+|.+..++     +|+|++||+|.|++. ...+||..      ..+.-+.+++.+.+
T Consensus         4 vrAlydy~~~~d~~~~~~eLsf~kGdil~V~~~-~d~~WW~~~~~~~~~~~g~~G~~Psnyv   64 (96)
T d1kjwa1           4 IRALFDYDKTKDCGFLSQALSFRFGDVLHVIDA-GDEEWWQARRVHSDSETDDIGFIPSKRR   64 (96)
T ss_dssp             EEESSCBCHHHHHCCCSSBCCBCTTCEEEEEEC-CSSSEEEEEECCSSCCCSCCEEEECHHH
T ss_pred             EEEcccCcCCcCCCCCCccceEcCCCEEEEeee-ccCceEEEEEccCCCCCCCEeEEeccce
Confidence            5799999987643     899999999999988 55678743      24566788887554

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=2.2e-05  Score=52.33  Aligned_cols=51  Identities=8%  Similarity=0.026  Sum_probs=39.2

Q ss_pred             CcEEEcccccCCCccccccccccceEEeccc--------------cccccccc--chhhhhhccchh
Q psy15850        133 GQARAKFNFVAQTHLELSLVKESPHKYVDSE--------------VTLQYRRP--VRNEIKELISEE  183 (225)
Q Consensus       133 ~~~~a~~~~~~~~~~els~~~g~~v~~~~~~--------------~~~~~~f~--~~~~l~e~~~~~  183 (225)
                      ..++|+|+|.+..+++|+|++||+|.|+...              ...|||++  .++.-+.+++.+
T Consensus         4 ~~~raly~y~~~~~~eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~n   70 (83)
T d1phta_           4 YQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGT   70 (83)
T ss_dssp             EEEEECSCBCCSSTTBCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEGG
T ss_pred             CEEEEcCccCCCCCCcccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEehh
Confidence            3589999999999999999999999998642              23578865  445556666553

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.42  E-value=3.5e-05  Score=50.16  Aligned_cols=38  Identities=5%  Similarity=-0.037  Sum_probs=32.8

Q ss_pred             cCcEEEcccccCCCccccccccccceEEecccccccccc
Q psy15850        132 EGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYRR  170 (225)
Q Consensus       132 ~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~f  170 (225)
                      ...++|+|+|.+..+++|+|++||+|.+++. ...+||.
T Consensus         7 g~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~-~~~~Ww~   44 (74)
T d1wfwa_           7 GSTMTVIKDYYALKENEICVSQGEVVQVLAV-NQQNMCL   44 (74)
T ss_dssp             SCEEECCSCBCCCSSSCCCBCTTCEEEEEEE-CTTSEEE
T ss_pred             CCEEEEeEEECCCCCCCccCccCCEEEEEEE-cCCCCEE
Confidence            3468999999999999999999999999987 4566774

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.14  E-value=0.00013  Score=53.51  Aligned_cols=48  Identities=4%  Similarity=-0.004  Sum_probs=38.6

Q ss_pred             cEEEcccccCCCccc-------cccccccceEEecccccccccccch---hhhhhccch
Q psy15850        134 QARAKFNFVAQTHLE-------LSLVKESPHKYVDSEVTLQYRRPVR---NEIKELISE  182 (225)
Q Consensus       134 ~~~a~~~~~~~~~~e-------ls~~~g~~v~~~~~~~~~~~~f~~~---~~l~e~~~~  182 (225)
                      .+.|+|+|.+..+++       |+|++||+|.|+.. .+.+||.+-+   +.-..+++.
T Consensus        25 ~vra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~~-~d~~WW~gr~~~~~g~~G~iPS   82 (145)
T d1vyva1          25 AVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEK-YNNDWWIGRLVKEGCEIGFIPS   82 (145)
T ss_dssp             EEEESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEEE-EETTEEEEEESSTTCCCEEEEC
T ss_pred             EEEEeeeeCCccCCcCCcccccccCcCCCEEEEeec-cCCCcEEEEEcCCCCceeEeCC
Confidence            478999999999887       99999999999988 4667775433   566677775

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.80  E-value=0.0016  Score=47.01  Aligned_cols=49  Identities=6%  Similarity=0.039  Sum_probs=36.0

Q ss_pred             cEEEcccccCCCccc-------cccccccceEEecccccccccccc---hhhhhhccchh
Q psy15850        134 QARAKFNFVAQTHLE-------LSLVKESPHKYVDSEVTLQYRRPV---RNEIKELISEE  183 (225)
Q Consensus       134 ~~~a~~~~~~~~~~e-------ls~~~g~~v~~~~~~~~~~~~f~~---~~~l~e~~~~~  183 (225)
                      .+.|+|+|.+..++.       |+|++||++.|+.. .+.+||..-   .+.-+.+++..
T Consensus        25 ~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~-~d~~WW~~r~~~~~~~~G~iPs~   83 (136)
T d1vyua1          25 AVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEK-YSNDWWIGRLVKEGGDIAFIPSP   83 (136)
T ss_dssp             EEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEE-CSSSEEEEEESSTTCCCEEEECH
T ss_pred             EEEEeeccCCCCCCCCcccCcccCCCCCCEEEEEec-cCCCcEEEEeccCCCceeccCch
Confidence            467999999887777       89999999999988 455666432   23346777763

>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn-binding protein (T-cell adapter protein adap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.70  E-value=0.0051  Score=39.50  Aligned_cols=39  Identities=18%  Similarity=0.209  Sum_probs=34.8

Q ss_pred             CccccccCCCeEEEEEecCCCeEEEE-ECCeEEEeeCCcE
Q psy15850         77 FTELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYV  115 (225)
Q Consensus        77 ~~eLs~~~Gdii~v~~~~~~~Ww~g~-~~g~~G~~P~nyv  115 (225)
                      ..+|+++.|+.|.|+...+.+-|.|+ ..|+-|+|+.+++
T Consensus        36 ~~dL~vk~GE~ldVIr~t~~~k~LcRN~~GkYGYV~~~~l   75 (77)
T d1ri9a_          36 TRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYL   75 (77)
T ss_dssp             TTBCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGS
T ss_pred             cccCCcCCCCEEEEEEeCCCCeEEEEcCCCcEEEEEeeee
Confidence            45999999999999999999999999 6899999997664

>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: GRB2-related adaptor protein 2 (MONA, GRID)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.73  E-value=0.00084  Score=45.55  Aligned_cols=56  Identities=9%  Similarity=0.031  Sum_probs=44.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cccc------ccchhhhhhccchhHHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQYR------RPVRNEIKELISEEELA  186 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~~------f~~~~~l~e~~~~~e~~  186 (225)
                      +.|.|++|.+-...+.+.||++.++.|.++..... .+++      |+++.+|++||..+.+.
T Consensus        26 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV~~y~~~~l~   88 (97)
T d1r1qa_          26 DIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSIS   88 (97)
T ss_dssp             CTTCEEEEECSSSTTCEEEEEECSSSEEEEECEECTTCCEESSSCCBSSHHHHHHHTTTSCSC
T ss_pred             CCCCEEEeecCCCCCCEEEEEEecCCeEEEEEEEcCCCeEEeCCCCcCCHHHHHHHHccCCcC
Confidence            56889999998888899999999999877765422 3443      89999999999887653

>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 2 (GRB2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.48  E-value=0.00073  Score=45.80  Aligned_cols=57  Identities=12%  Similarity=0.002  Sum_probs=45.3

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cccc------ccchhhhhhccchhHHHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQYR------RPVRNEIKELISEEELAR  187 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~~------f~~~~~l~e~~~~~e~~~  187 (225)
                      +.|.|++|.+-...+.+.|++..++.|.++..... +++.      |.++.+|++||..+++..
T Consensus        24 ~~G~FLvR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~F~sl~~LV~~y~~~~l~~   87 (96)
T d1jyra_          24 HDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSR   87 (96)
T ss_dssp             STTBEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSSCEESSHHHHHHHTTSSCSCS
T ss_pred             CCCeEEEEecCCCCCCEEEEEEeCCceEEEEEEECCCCeEEeCCccCCCHHHHHHHHhhCCCCC
Confidence            56899999998888899999999999877765322 3333      899999999998876543

>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Csk homologous kinase Chk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.26  E-value=0.027  Score=37.58  Aligned_cols=53  Identities=8%  Similarity=-0.149  Sum_probs=41.2

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cccc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+.+..+.+.||++.++.|.++..... ++|.      |+++.+|++||..+
T Consensus        24 ~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LI~~y~~~   83 (97)
T d1jwoa_          24 EDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKD   83 (97)
T ss_dssp             CTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEESSSEESSTTSCCBSCHHHHHHHHHHC
T ss_pred             CCCeEEEEecCCCCccEEEEEEecCceEEEEEEEcCCcEEecCCcccCCHHHHHHHHhhC
Confidence            46889999998888899999999988877665322 2332      89999999988653

>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.55  E-value=0.038  Score=37.15  Aligned_cols=53  Identities=8%  Similarity=-0.088  Sum_probs=41.3

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cccc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+-...+.+.||++.++.|+++..... ++|.      |+++.+|++||..+
T Consensus        24 ~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~   83 (101)
T d1k9aa2          24 ETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTD   83 (101)
T ss_dssp             CTTEEEEEECSSSTTSEEEEEECSSSEEEEEEEEETTEEESSSSSCBSSHHHHHHHHHHC
T ss_pred             CCCCEEEeccCCCCCCEEEEEEeCCccEEEEEEEcCCCceecCCcccCCHHHHHHHHhhC
Confidence            46899999998888889999999999877654322 3332      78999999998653

>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Adaptor protein Aps
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.35  E-value=0.028  Score=36.55  Aligned_cols=51  Identities=8%  Similarity=-0.097  Sum_probs=38.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccccc------ccchhhhhhccc
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQYR------RPVRNEIKELIS  181 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~~------f~~~~~l~e~~~  181 (225)
                      ..|.|++|.+....+.+.|+++.+..|.++.... .++|.      |+++.+|++||.
T Consensus        28 ~dG~FLvR~S~~~~g~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~~LV~~y~   85 (86)
T d1rpya_          28 SHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDMLRHFH   85 (86)
T ss_dssp             GTTCEEEEECSSSTTCEEEEEEETTEEEEEEC----CCCHHHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEecCCCCCcEEEEEEECCceEEEEEEEcCCceEEeCCCeeCCHHHHHHhhc
Confidence            4589999999888889999999999988776543 34444      677777777764

>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Ews/fli1 activated transcript 2, Eat2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.07  E-value=0.062  Score=36.08  Aligned_cols=53  Identities=11%  Similarity=-0.066  Sum_probs=41.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccc-cccc-c-----------cccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQ-Y-----------RRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~-~-----------~f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+-+..+.+.||++.++.|.++... ..++ |           .|+++.+|++||...
T Consensus        24 ~~G~FLVR~S~~~~g~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~~~~~~F~sl~~LV~~y~~~   89 (103)
T d1i3za_          24 VDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKYGKP   89 (103)
T ss_dssp             STTEEEEEECSSSTTCEEEEEECSSSEEEEEEEECTTSCEEECBCTTSCCCEESSSHHHHHHTTSS
T ss_pred             CCCeEEEEecCCCCCCEEEEEEeCCeEEEEEeEEcCCCcEEEeccCCcCccccCCHHHHHHHhhhC
Confidence            468999999988889999999999998776542 2222 2           278999999999753

>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Shc adaptor protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.05  E-value=0.048  Score=36.83  Aligned_cols=53  Identities=6%  Similarity=-0.108  Sum_probs=41.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccccc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+-+..+.+.||+..++.|.++.....++++      |+++.+|++||..+
T Consensus        25 ~~G~FLVR~S~~~~g~~vLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~~   83 (104)
T d1mila_          25 LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDN   83 (104)
T ss_dssp             STTEEEEEECCSSCSSEEEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHHHHHHH
T ss_pred             cCCcEEEEecCCCCCCEEEEEEEccccceEEEEeCCCEEEeCCeeECCHHHHHHHHhhC
Confidence            358899999988889999999999998776553333322      88999999998653

>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.31  E-value=0.062  Score=37.82  Aligned_cols=54  Identities=15%  Similarity=0.054  Sum_probs=42.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccc-cccc-cc------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQ-YR------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~-~~------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|++|.+....+.+.||++.++.|.++... ..+| |.      |.++.+|++||..+.
T Consensus        27 ~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~i~~~~~F~sl~eLV~~Y~~~~   88 (129)
T d1a81a1          27 SDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTHASPADLCHYHSQES   88 (129)
T ss_dssp             CTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHTTCC
T ss_pred             CCccEEEEccCCCCcceEEEeeecccceEEEEEEcCCCCeeecCCcccCCHHHHHHHHhhCC
Confidence            568999999999889999999999999876543 2232 22      899999999997643

>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine phoshatase shp-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.93  E-value=0.057  Score=36.69  Aligned_cols=53  Identities=17%  Similarity=0.123  Sum_probs=41.5

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cccc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQYR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+-...+.+.||++.++.|.++..... ++|.      |+++.+|++||..+
T Consensus        24 ~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~   83 (109)
T d2shpa2          24 VDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEH   83 (109)
T ss_dssp             CTTEEEEEECSSSTTCEEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHHHHHHTC
T ss_pred             CCCeEEEEecCCCCCCEEEEEEeCCcEEEEEEEEcCCeEEEcCCcccCCHHHHHHHHHHC
Confidence            35889999998888899999999999877765333 3333      78999999998653

>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase 6 (Breast tumor kinase, Brk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.79  E-value=0.073  Score=35.53  Aligned_cols=54  Identities=7%  Similarity=-0.068  Sum_probs=41.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccc-c-ccccc------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-V-TLQYR------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~-~~~~~------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|++|.+-...+.+.||++.++.|.++... . +++|.      |+++.+|++||....
T Consensus        24 ~~G~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~~   85 (100)
T d1rjaa_          24 ATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQS   85 (100)
T ss_dssp             SSCCEEEEECSSSSSCEEEEECTTSSCEEEEEEECSSSCEEEETTEEESSHHHHHHHHHHCC
T ss_pred             CCCeEEeecCCCCCCCEEEEEEcCCCceEEEEEECCCCCEEecCCCccCCHHHHHHHHhhCC
Confidence            568999999988888999999999998776543 2 22233      799999999986543

>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4, SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 4, SOCS-4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.25  E-value=0.097  Score=35.62  Aligned_cols=55  Identities=13%  Similarity=0.040  Sum_probs=42.6

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-ccc----------cccchhhhhhccchhHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQY----------RRPVRNEIKELISEEEL  185 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~~----------~f~~~~~l~e~~~~~e~  185 (225)
                      ..|.|++|.+-...+.+.||++.++.|.++..... ++|          .|+++.+|++||..+++
T Consensus        31 ~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~l~~~~~~~~~F~sl~~LV~~Y~~~~~   96 (112)
T d2izva2          31 PEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVFHSPDITGLLEHYKDPSA   96 (112)
T ss_dssp             CTTEEEEEECSSTTCSEEEEEEETTEEEEEECEEETTEEESCTTCTTSCCBSSHHHHHHHTCCGGG
T ss_pred             CCCcEEEeecCCCCCCeEEEEEecCCceEEEEEEeCCeEEEeecccCcccCCCHHHHHHHHhcccc
Confidence            46889999998888889999999988877655322 333          26789999999987653

>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phospholipase C-gamma-1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.02  E-value=0.052  Score=36.74  Aligned_cols=53  Identities=9%  Similarity=-0.016  Sum_probs=39.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccccccc------ccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVTLQYR------RPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~~~~~------f~~~~~l~e~~~~~e  184 (225)
                      ..|.|++|.+ ...+.+.||+..++.|.++.....++++      |.++.+|++||..+.
T Consensus        30 ~~G~FLVR~S-~~~~~yvLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~~~   88 (105)
T d2fcia1          30 RDGAFLVRKR-NEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHP   88 (105)
T ss_dssp             SSCCEEEEEC-SSTTCEEEEEEETTEECCCEEBCCSSCEECSSSEESTTHHHHHHHHHSC
T ss_pred             CCCeEEEEec-CCCCCEEEEEEeccccEEEEEEecCCeEecCCcccCCHHHHHHHHhhCC
Confidence            3588999988 5577899999998888766654333333      889999999987643

>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Abl tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.84  E-value=0.12  Score=34.43  Aligned_cols=53  Identities=11%  Similarity=-0.098  Sum_probs=41.5

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|+++.+-...+.+.||++.++.|.++.... .+| |.      |.++.+|++||...
T Consensus        25 ~~G~FLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~y~~~   85 (101)
T d1opka2          25 INGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTV   85 (101)
T ss_dssp             CTTEEEEEECSSSTTCEEEEEEETTEEEEEECEECTTSCEESSTTSCBSSHHHHHHHHTTC
T ss_pred             CCCeEEEEecCCCCCCEEEEEEcCcceEEEEeEECCCCCEEeCCCcccCCHHHHHHHHhhC
Confidence            4688999999888888999999999887776542 233 32      89999999998764

>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.97  E-value=0.11  Score=36.45  Aligned_cols=53  Identities=19%  Similarity=0.113  Sum_probs=41.6

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+.+..+.+.||+..++.|.++.... .+| |.      |+++.+|++||..+
T Consensus        28 ~~G~FLVR~S~~~~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~Lv~~Y~~~   88 (130)
T d2oq1a1          28 ADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRD   88 (130)
T ss_dssp             CTTCEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEETTSCCBSSHHHHHHHHHHC
T ss_pred             CCceEEEEecCCCCccEEEEEeeCCceEEEEEEEcCCCceeccCCCCcCCHHHHHHHHhhC
Confidence            5688999999989999999999999987765532 222 22      89999999998554

>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Syk tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.31  E-value=0.18  Score=34.95  Aligned_cols=52  Identities=12%  Similarity=-0.021  Sum_probs=38.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+.. .+.+.||+..++.|.++.... .+| |.      |+++.+|++||...
T Consensus        51 ~~G~FLVR~S~~-~~~yvLSv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sL~~LI~~y~~~  110 (125)
T d1a81a2          51 TNGKFLIRARDN-NGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYK  110 (125)
T ss_dssp             CTTCEEEEECSS-SSCEEEEEEETTEEEEEEEEECTTSCEECTTSCCBSCHHHHHHHHTTC
T ss_pred             CCceEEEEecCC-CCCEEEEeeccccceeEeeeEcCCCcEeccCCcccCCHHHHHHHHhhC
Confidence            457898887744 577899999999887775532 233 32      78999999998754

>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha subunit {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Phosphatidylinositol 3-kinase, p85-alpha subunit
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.60  E-value=0.12  Score=34.83  Aligned_cols=54  Identities=15%  Similarity=0.068  Sum_probs=38.4

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccc-cccccc-------ccchhhhhhccchhHH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSE-VTLQYR-------RPVRNEIKELISEEEL  185 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~-~~~~~~-------f~~~~~l~e~~~~~e~  185 (225)
                      +.|.|++|.+ ...+.+.|++..++.|.++... ..++|.       |+++.+|++||..+.+
T Consensus        29 ~~G~FLVR~S-~~~~~y~Lsv~~~~~v~H~~I~~~~~g~~~~~~~~~F~sl~~LI~~Y~~~~l   90 (107)
T d1qada_          29 RDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSL   90 (107)
T ss_dssp             CTTEEEEEEC----CCEEEEEEETTEEEEEEEEEETTEEESSTTCCCBSSHHHHHHHHHHSCG
T ss_pred             CCCcEEEEec-CCCCCEEEEEEecCCeEEEEEEECCCCeEEcCCCCccCCHHHHHHHHHhCcc
Confidence            4588999998 4567889999988888766543 223443       7899999999877553

>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: The Xlp protein Sap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.13  E-value=0.23  Score=32.89  Aligned_cols=53  Identities=4%  Similarity=-0.172  Sum_probs=40.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-cccc------------cccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQY------------RRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~~------------~f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+-...+.+.|++..++.+.++.... .+++            .|+++.+|+++|...
T Consensus        25 ~~G~FLVR~S~~~~g~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~F~sl~~Li~~y~~~   90 (104)
T d1d4ta_          25 LDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKP   90 (104)
T ss_dssp             CTTEEEEEECSSSTTCEEEEEEETTEEEEEEEEECTTSCEEECBCTTSCCCCBSSHHHHHHHHTSS
T ss_pred             CCCeEEEEecCCCCCCEEEEEecCCCceEEEEEEcCCCcEEEeeccCCCCcccCCHHHHHHHHhhC
Confidence            3588999999988899999999998887765432 2222            278899999988653

>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Crk proto-oncogen
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.95  E-value=0.27  Score=32.75  Aligned_cols=54  Identities=9%  Similarity=-0.077  Sum_probs=40.9

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEeccccc-cc-----------------------ccccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEVT-LQ-----------------------YRRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~~-~~-----------------------~~f~~~~~l~e~~~~~e  184 (225)
                      +.|.|+++.+....+.+.|+++.++.|.++..... .+                       -.|+++.+|++||..+.
T Consensus        20 ~~G~FLVR~S~~~~~~~~LS~~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~sl~~LV~~y~~~~   97 (109)
T d2eyva1          20 RHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHY   97 (109)
T ss_dssp             STTCEEEECCCSSSSCEEEEEEETTEEEEEEEECCCCSSCCCSSSSCCCCSCCCCCEEETTEEESSHHHHHHHSSSSC
T ss_pred             CCCeEEeeecCCCCCCEEEEEEECCEEEEEEEEEcCCcceeeccccccccccccceEEeCCeeeCCHHHHHHHHhhCc
Confidence            46899999998888889999999888876654221 11                       12789999999998754

>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2, SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Suppressor of cytokine signaling 2, SOCS-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.44  E-value=0.25  Score=32.76  Aligned_cols=53  Identities=9%  Similarity=-0.025  Sum_probs=39.7

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-------------ccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-------------YRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-------------~~f~~~~~l~e~~~~~  183 (225)
                      +.|.|+++.+-...+.+.|+++.++.+.++.... .++             -.|+++.+|++||...
T Consensus        35 ~~GtFLVR~S~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~~~F~sl~~LI~~y~~~  101 (103)
T d2c9wa2          35 PEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQM  101 (103)
T ss_dssp             CTTCEEEEECCSTTCSEEEEEEETTEEEEEEEEEETTEEEECTTTTTGGGCCCBSCHHHHHHHHHHH
T ss_pred             CCCceEEeccCCCCCCEEEEEEECCEEEEEEEEEcCCeEeeCCccccccCCCccCCHHHHHHHHHhh
Confidence            4688999999888888999999988887654321 111             2388999999988653

>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein 7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.31  E-value=0.28  Score=33.25  Aligned_cols=54  Identities=13%  Similarity=-0.057  Sum_probs=41.1

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc--ccc---c-------cccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TLQ---Y-------RRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~~---~-------~f~~~~~l~e~~~~~e  184 (225)
                      ..|.|+++.+-...+.+.||+..++.|.++....  .++   |       .|.++.+|++||..+.
T Consensus        32 ~dG~FLvR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LI~~y~~~~   97 (113)
T d2qmsa1          32 VDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLNR   97 (113)
T ss_dssp             CTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEEESSSCEEEESSTTSSCBSSHHHHHHHHTTCC
T ss_pred             CCccEEEEeccCCCCCEEEEEEeCCeEEEEEEEEeCCCCeEEEEecCCCcccCCHHHHHHHhccCC
Confidence            4688999999888888999999999887764321  111   1       2789999999998653

>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Growth factor receptor-bound protein 10, GRB10
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.02  E-value=0.28  Score=32.70  Aligned_cols=53  Identities=8%  Similarity=-0.050  Sum_probs=40.0

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc--cc----------cccccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV--TL----------QYRRPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~--~~----------~~~f~~~~~l~e~~~~~  183 (225)
                      +.|.|++|.+-...+.+.||+..+..|.++....  ++          .-.|+++.+|++||..+
T Consensus        27 ~dG~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~~~~~~F~sl~~LV~~y~~~   91 (105)
T d1nrva_          27 VDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLN   91 (105)
T ss_dssp             CTTEEEEEECSSCTTCEEEEEEETTEEEEEEEEEC-----CCEESSTTSSCBSSHHHHHHHHTTC
T ss_pred             CCceEEEEeCCCCCCCEEEEEEECCceeEEEEEEecCCCeEEEEECCCCcccCCHHHHHHHhccC
Confidence            4689999999888888999999998887654321  11          11278999999998764

>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Tyrosine-protein kinase zap-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.93  E-value=0.22  Score=34.49  Aligned_cols=52  Identities=13%  Similarity=-0.001  Sum_probs=38.2

Q ss_pred             CcCcEEEcccccCCCccccccccccceEEecccc-ccc-cc------ccchhhhhhccchh
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVKESPHKYVDSEV-TLQ-YR------RPVRNEIKELISEE  183 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~g~~v~~~~~~~-~~~-~~------f~~~~~l~e~~~~~  183 (225)
                      ..|.|++|.+-. .+.+.||+..+..|+++.... .++ |.      |+++.+|++||...
T Consensus        51 ~dGtFLVR~S~~-~g~yvLSv~~~~~v~H~~I~~~~~g~~~l~~~~~F~sl~~LV~~y~~~  110 (124)
T d2oq1a2          51 TDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLK  110 (124)
T ss_dssp             CTTEEEEEECSS-TTEEEEEEEETTEEEEEEEEECTTSCEESTTSCCBSSHHHHHHHHHHC
T ss_pred             CCceEEeEecCC-CCCEEEEeecCCceEEEEEEECCCCCEEeCCCcccCCHHHHHHHHhhC
Confidence            458899888843 677889999999887776532 222 32      89999999998753

>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: SH2-like
superfamily: SH2 domain
family: SH2 domain
domain: Hemopoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.19  E-value=0.47  Score=31.31  Aligned_cols=54  Identities=9%  Similarity=-0.020  Sum_probs=38.5

Q ss_pred             CcCcEEEcccccCCCcccccccc-----ccceEEeccc--ccccc------cccchhhhhhccchhH
Q psy15850        131 SEGQARAKFNFVAQTHLELSLVK-----ESPHKYVDSE--VTLQY------RRPVRNEIKELISEEE  184 (225)
Q Consensus       131 ~~~~~~a~~~~~~~~~~els~~~-----g~~v~~~~~~--~~~~~------~f~~~~~l~e~~~~~e  184 (225)
                      +.|.|++|.+-...+.+.|+++.     +..|.++...  .+++|      .|+++.+|++||....
T Consensus        23 ~~G~FLVR~S~~~~g~~~Lsv~~~~~~~~~~v~H~~i~~~~~g~~~~~~~~~F~sl~~LV~~y~~~~   89 (103)
T d1qcfa2          23 MLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGN   89 (103)
T ss_dssp             CTTCEEEEECSSSTTSEEEEEEEEETTTEEEEEEEEEEECTTSCEESSSSSCBSSHHHHHHHHTSSC
T ss_pred             CCCcEEEEccCCCCCCeEEEEEecCCCcCceEEEEEEEEcCCCceeecCCcccCCHHHHHHHHhhCC
Confidence            56899999999999999999863     5566544322  12222      2899999999987643