Psyllid ID: psy15896

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490--
SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMAAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLFSNAMVVAGLVEDPRTI
cccEEEEEccccccccEEEEEEccccHHcccHHHHHHHHHHccccccccEEEEEEccccccccccccccccHHHHHHHHHHccccccccccccEEEccccccccccccccccHHHHHHHHHHHHcccccccccEEEEEEcccEEEEEEEEccccccccccccccccccEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccccccHHHHHHHcccccccEEEEEcccHHHHHcccHHHHHHHcccEEEEccccHHHHHHHcccccccccEEEEccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEccccccccEEEEEcccHHHHHHHHHHHccccccccccccccEEEEccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccc
ccEEEEEcccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccEcccccccccccccccccccccccccEEEEEcHHHHHcccccEEcccHHHccHHHHHHHHHHHHcccHcccEEEEccccccHHHHEEEEcccccccccccccccccccEEEEEEEEEEccHHHHHHHHHHHHcccEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHcHcccccEEEEEcccHHHHHccHHHHHHHHcccEEEEEEccHHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccEEEEEccccHHHHHHHHHHHHccccccHHHHccEEEEccccHHHHHHccHHHHcHHHHHcEEEEEEEcHHHHcccccccccc
sgtyeitecptaekgTKIVIHLKADCREFADEQTVLNVIRKYsnfvnspifvndnqtnkiqplwimepksvkleEHVEFYRYisnsndqprfvlhyrtgnlplwimepksvkleEHVEFYRYisnsndqprfvlhyrtdaplsiksvlyfpetkpglfemsreteVGVSLYTRRILIKAKAENILPKWLRFVKgvvdsediplnlsrellqnspliNKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYesseqeagtliTLPEYIEKLGegqkdiyylcapsralalssPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRqdkeedksgqilgpdslpssdaDKLVSWIEEKMKNKVHSVKITtkldshpcvvtVEEMAAARHFLKTQSQNLNEEQRFSllqprleinpkhpvIKKLASLSSSNPALAELVVQQLFSNAMVVAGlvedprti
sgtyeitecptaekgtkiVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEFYRYisnsndqprfVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYisnsndqprFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKakaenilpkwLRFVKGVVDSEDIPLNLsrellqnsplinklRNVLTTRILKflqdrskrdVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLlryesseqeagtLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEmrqdkeedksgqilgpdslpssdADKLVSWIEEKMKnkvhsvkittkldshpCVVTVEEMAAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLFSNAMVVAGlvedprti
SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMAAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKlaslsssnpalaelVVQQLFSNAMVVAGLVEDPRTI
********CPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLT*******************************LVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMAAARHFL*******************************************************************
SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNK*******************************RFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQ***TLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEM************************KLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMAAAR**********************LEINPKHPVIKKLASL*S**PALAELVVQQLFSNAMVVAGLVEDP***
SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVE*************QILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMAAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLFSNAMVVAGLVEDPRTI
*GTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQ**********************SNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQE**TLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMAAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLFSNAMVVAGLVE*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTxxxxxxxxxxxxxxxxxxxxxQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLFSNAMVVAGLVEDPRTI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query492 2.2.26 [Sep-21-2011]
Q9CQN1706 Heat shock protein 75 kDa yes N/A 0.918 0.640 0.483 1e-137
Q5XHZ0706 Heat shock protein 75 kDa yes N/A 0.918 0.640 0.481 1e-137
Q2TBI4703 Heat shock protein 75 kDa yes N/A 0.914 0.640 0.481 1e-136
Q12931704 Heat shock protein 75 kDa yes N/A 0.918 0.642 0.473 1e-136
Q86L04711 TNF receptor-associated p yes N/A 0.886 0.613 0.375 4e-90
Q6ARM0622 Chaperone protein HtpG OS yes N/A 0.904 0.715 0.339 2e-80
Q24VT7614 Chaperone protein HtpG OS yes N/A 0.898 0.719 0.331 2e-79
P61185650 Chaperone protein HtpG OS yes N/A 0.939 0.710 0.314 4e-65
Q1CZI7654 Chaperone protein HtpG OS yes N/A 0.910 0.685 0.293 4e-62
Q39SQ3650 Chaperone protein HtpG OS yes N/A 0.939 0.710 0.304 6e-62
>sp|Q9CQN1|TRAP1_MOUSE Heat shock protein 75 kDa, mitochondrial OS=Mus musculus GN=Trap1 PE=1 SV=1 Back     alignment and function desciption
 Score =  489 bits (1260), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/494 (48%), Positives = 326/494 (65%), Gaps = 42/494 (8%)

Query: 1   SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKI 60
           SG +EI E      GTKI+IHLK+DC++FA E  V +V+ KYSNFV+ P+++N  + N +
Sbjct: 238 SGVFEIAEASGVRPGTKIIIHLKSDCKDFASESRVQDVVTKYSNFVSFPLYLNGKRINTL 297

Query: 61  QPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFY 120
           Q +                                        W+M+PK +   +H EFY
Sbjct: 298 QAI----------------------------------------WMMDPKDISEFQHEEFY 317

Query: 121 RYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAK 180
           RYI+ + D+PRF LHY+TDAPL+I+S+ Y PE KP +F++SRE    V+LY+R++LI+ K
Sbjct: 318 RYIAQAYDKPRFTLHYKTDAPLNIRSIFYVPEMKPSMFDVSRELGSSVALYSRKVLIQTK 377

Query: 181 AENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVE 240
           A +ILPKWLRF++GVVDSEDIPLNLSRELLQ S LI KLR+VL  R++KF  D+SK+D E
Sbjct: 378 AADILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRLIKFFIDQSKKDAE 437

Query: 241 NYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQK 300
            Y  F++DY LF++EGIVTT +   KE+IAKLLRYESS   AG L +LP+Y  ++  G +
Sbjct: 438 KYAKFFEDYGLFMREGIVTTAEQDIKEDIAKLLRYESSALPAGQLTSLPDYASRMQAGTR 497

Query: 301 DIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMR 360
           +IYYLCAP+R LA  SPY EA++++  +VLFCYE  DEL LL LR F    L SVE ++ 
Sbjct: 498 NIYYLCAPNRHLAEHSPYYEAMKQKHTEVLFCYEQFDELTLLHLREFDKKKLISVETDIV 557

Query: 361 QD--KEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEM 418
            D  KEE         + L   + + L++W+   + ++V +VK+T +LD+HP +VTV EM
Sbjct: 558 VDHYKEEKFEDTSPADERLSEKETEDLMAWMRNALGSRVTNVKVTFRLDTHPAMVTVLEM 617

Query: 419 AAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLFSN 478
            AARHFL+ Q     +E+R  LLQP LEINP+H +IKKL  L  S P LA+L+V Q++ N
Sbjct: 618 GAARHFLRMQQLAKTQEERAQLLQPTLEINPRHTLIKKLCQLRESEPELAQLLVDQIYEN 677

Query: 479 AMVVAGLVEDPRTI 492
           AM+ AGLV+DPR +
Sbjct: 678 AMIAAGLVDDPRAM 691
Chaperone that expresses an ATPase activity.
Mus musculus (taxid: 10090)
>sp|Q5XHZ0|TRAP1_RAT Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus GN=Trap1 PE=1 SV=1 Back     alignment and function description
>sp|Q2TBI4|TRAP1_BOVIN Heat shock protein 75 kDa, mitochondrial OS=Bos taurus GN=TRAP1 PE=2 SV=1 Back     alignment and function description
>sp|Q12931|TRAP1_HUMAN Heat shock protein 75 kDa, mitochondrial OS=Homo sapiens GN=TRAP1 PE=1 SV=3 Back     alignment and function description
>sp|Q86L04|TRAP1_DICDI TNF receptor-associated protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=trap1 PE=2 SV=1 Back     alignment and function description
>sp|Q6ARM0|HTPG_DESPS Chaperone protein HtpG OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) GN=htpG PE=3 SV=1 Back     alignment and function description
>sp|Q24VT7|HTPG_DESHY Chaperone protein HtpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1 Back     alignment and function description
>sp|P61185|HTPG_GEOSL Chaperone protein HtpG OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=htpG PE=3 SV=1 Back     alignment and function description
>sp|Q1CZI7|HTPG_MYXXD Chaperone protein HtpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1 Back     alignment and function description
>sp|Q39SQ3|HTPG_GEOMG Chaperone protein HtpG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=htpG PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
170050377 705 heat shock protein [Culex quinquefasciat 0.916 0.639 0.593 1e-170
157127009 703 heat shock protein [Aedes aegypti] gi|10 0.916 0.641 0.595 1e-170
312374552 713 hypothetical protein AND_15795 [Anophele 0.916 0.632 0.576 1e-167
158289742 653 AGAP010691-PA [Anopheles gambiae str. PE 0.912 0.687 0.582 1e-166
195380918 683 GJ20879 [Drosophila virilis] gi|19414400 0.916 0.660 0.571 1e-162
195124692 684 GI21277 [Drosophila mojavensis] gi|19391 0.916 0.659 0.565 1e-162
382929294 693 Hsp90-related protein TRAP1 [Bombyx mori 0.916 0.650 0.571 1e-161
242009900 689 heat shock protein 75 kDa, putative [Ped 0.912 0.651 0.565 1e-160
195331851 691 GM20868 [Drosophila sechellia] gi|194124 0.918 0.654 0.563 1e-159
195580954 691 GD10320 [Drosophila simulans] gi|1941923 0.918 0.654 0.563 1e-159
>gi|170050377|ref|XP_001861262.1| heat shock protein [Culex quinquefasciatus] gi|167872017|gb|EDS35400.1| heat shock protein [Culex quinquefasciatus] Back     alignment and taxonomy information
 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 292/492 (59%), Positives = 368/492 (74%), Gaps = 41/492 (8%)

Query: 1   SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKI 60
           SG +EI E      GTKIVIHLKADCREF+DE  +  VIRKYSNFV SPI++N  Q N+I
Sbjct: 240 SGNFEIQEAENVRVGTKIVIHLKADCREFSDEDRIREVIRKYSNFVGSPIYLNGKQANQI 299

Query: 61  QPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFY 120
           QP+                                        W+MEPK V  ++H EFY
Sbjct: 300 QPI----------------------------------------WLMEPKDVTQDQHNEFY 319

Query: 121 RYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAK 180
           R++ N+ D PRF LHY+TD PLSI+++LYFPE KPGLFEMSR+++VGV+LYTR++LI++K
Sbjct: 320 RFVGNTFDTPRFTLHYKTDVPLSIRALLYFPEGKPGLFEMSRDSDVGVALYTRKVLIQSK 379

Query: 181 AENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVE 240
            EN+LPKWLRF+KGVVDSEDIPLNLSRELLQNS LI KLR VLT R+L+FL DRS +D E
Sbjct: 380 TENLLPKWLRFIKGVVDSEDIPLNLSRELLQNSALIRKLRTVLTNRVLRFLHDRSTKDPE 439

Query: 241 NYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQK 300
           NY  FYKDY LF+KEGIVT+Q+ +EKEEIAKLLR+E+S+QE    I+LPEY  +  EGQK
Sbjct: 440 NYDKFYKDYGLFLKEGIVTSQEPNEKEEIAKLLRFETSKQE-DKRISLPEYCNQQQEGQK 498

Query: 301 DIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMR 360
           DIYYL AP+R LA +SPY E+L+++ ++VLFCYE +DEL+L+QL  F   NL SVEKEMR
Sbjct: 499 DIYYLAAPNRTLAEASPYYESLKKKGIEVLFCYEAYDELVLMQLGQFLGKNLVSVEKEMR 558

Query: 361 QDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMAA 420
           + ++ ++S   L   SL  +  D+L+ WI++K+  KV +VK TTKLDSHPCVVTVEEMAA
Sbjct: 559 RSEKSEESADQLIEGSLLKTQIDELIPWIKQKLTGKVTNVKTTTKLDSHPCVVTVEEMAA 618

Query: 421 ARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLFSNAM 480
           ARHF+KTQS N++EE R++LLQP+LEINPKHP++KKL  L+ S+P LAEL+ +QLFSNAM
Sbjct: 619 ARHFIKTQSHNMSEENRYALLQPQLEINPKHPIVKKLFKLTQSDPELAELLAKQLFSNAM 678

Query: 481 VVAGLVEDPRTI 492
           V AGLV+DPR +
Sbjct: 679 VGAGLVDDPRML 690

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157127009|ref|XP_001654758.1| heat shock protein [Aedes aegypti] gi|108884463|gb|EAT48688.1| AAEL000301-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|312374552|gb|EFR22087.1| hypothetical protein AND_15795 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|158289742|ref|XP_311405.3| AGAP010691-PA [Anopheles gambiae str. PEST] gi|157018473|gb|EAA07036.3| AGAP010691-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|195380918|ref|XP_002049203.1| GJ20879 [Drosophila virilis] gi|194144000|gb|EDW60396.1| GJ20879 [Drosophila virilis] Back     alignment and taxonomy information
>gi|195124692|ref|XP_002006825.1| GI21277 [Drosophila mojavensis] gi|193911893|gb|EDW10760.1| GI21277 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|382929294|gb|AFG30049.1| Hsp90-related protein TRAP1 [Bombyx mori] Back     alignment and taxonomy information
>gi|242009900|ref|XP_002425720.1| heat shock protein 75 kDa, putative [Pediculus humanus corporis] gi|212509621|gb|EEB12982.1| heat shock protein 75 kDa, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|195331851|ref|XP_002032612.1| GM20868 [Drosophila sechellia] gi|194124582|gb|EDW46625.1| GM20868 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|195580954|ref|XP_002080299.1| GD10320 [Drosophila simulans] gi|194192308|gb|EDX05884.1| GD10320 [Drosophila simulans] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query492
FB|FBgn0026761691 Trap1 "Trap1" [Drosophila mela 0.849 0.604 0.567 2.6e-125
RGD|1359733706 Trap1 "TNF receptor-associated 0.831 0.579 0.497 7.2e-107
MGI|MGI:1915265706 Trap1 "TNF receptor-associated 0.831 0.579 0.497 7.2e-107
UNIPROTKB|Q2TBI4703 TRAP1 "Heat shock protein 75 k 0.825 0.577 0.501 1.9e-106
UNIPROTKB|F1RK45701 TRAP1 "Uncharacterized protein 0.825 0.579 0.504 2.5e-106
UNIPROTKB|F1PXQ9705 TRAP1 "Uncharacterized protein 0.825 0.575 0.498 2.5e-106
UNIPROTKB|J9NSW0702 TRAP1 "Uncharacterized protein 0.825 0.578 0.498 2.5e-106
UNIPROTKB|F5H897651 TRAP1 "Heat shock protein 75 k 0.831 0.628 0.490 1.1e-105
UNIPROTKB|I3L0K7495 TRAP1 "TNF receptor-associated 0.831 0.826 0.490 1.1e-105
UNIPROTKB|Q12931704 TRAP1 "Heat shock protein 75 k 0.831 0.580 0.490 1.1e-105
FB|FBgn0026761 Trap1 "Trap1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
 Identities = 240/423 (56%), Positives = 314/423 (74%)

Query:    74 EEHVE-FYRYISNSNDQPRFVLHYRTGN--LPLWIMEPKSVKLEEHVEFYRYISNSNDQP 130
             EE ++   +  SN    P  +L+ +  N   PLW++EP+S+  E+H +FYR+ISNS D P
Sbjct:   255 EERIKAVIKKYSNFVGSP-ILLNGKQANEIKPLWLLEPQSISKEQHHDFYRFISNSFDVP 313

Query:   131 RFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAKAENILPKWLR 190
             RF LHY  D PLSI ++LYFPE KPGLFEMSR+   GV+LYTR++LI++K E++LPKWLR
Sbjct:   314 RFTLHYNADVPLSIHALLYFPEGKPGLFEMSRDGNTGVALYTRKVLIQSKTEHLLPKWLR 373

Query:   191 FVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYS 250
             FVKGVVDSEDIPLNLSRELLQNS LI KL +V++TR+++FLQ+RSK+  E Y AFY+DY 
Sbjct:   374 FVKGVVDSEDIPLNLSRELLQNSSLIRKLSSVISTRVIRFLQERSKKQPEEYEAFYRDYG 433

Query:   251 LFIKEGIVTTQDVHEKEEIAKLLRYESSEQE-AGTLITLPEYIEKLGEGQKDIYYLCAPS 309
             LF+KEGIVT+ D  EKEEIAKLLR+ESS+ E A   ++L EY   +   Q++IYYL AP+
Sbjct:   434 LFLKEGIVTSSDASEKEEIAKLLRFESSKSETASGRMSLEEYYNAVPAEQQNIYYLAAPN 493

Query:   310 RALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSG 369
             R LA SSPY E+L++R   VLFCYEP+DEL+L+QL  F++  L SVEKEMR++ +E  + 
Sbjct:   494 RVLAESSPYYESLKKRNELVLFCYEPYDELVLMQLGKFKSKKLVSVEKEMREESKETTAT 553

Query:   370 QILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMAAARHFLKTQS 429
                G  SL  S+ D L+ W+EE+++ +V  VK TT+LD+HPCV+TVEEMAAARHF++TQS
Sbjct:   554 TDFGEGSLLRSELDTLIPWLEEELRGQVIKVKATTRLDTHPCVITVEEMAAARHFIRTQS 613

Query:   430 QNLNEEQRFSLLQPRLEINPKHPVIKKXXXXXXXXXXXXXXVVQQLFSNAMVVAGLVEDP 489
               + E+ RF+LLQP LEINPKHP+IKK              + +QLF+NAMV AGL EDP
Sbjct:   614 HQVPEQNRFALLQPELEINPKHPIIKKLNKLRESDKDLAQLIAKQLFANAMVGAGLAEDP 673

Query:   490 RTI 492
             R +
Sbjct:   674 RML 676
GO:0005739 "mitochondrion" evidence=ISS
GO:0016887 "ATPase activity" evidence=ISS
GO:0006950 "response to stress" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0006457 "protein folding" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
RGD|1359733 Trap1 "TNF receptor-associated protein 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1915265 Trap1 "TNF receptor-associated protein 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q2TBI4 TRAP1 "Heat shock protein 75 kDa, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RK45 TRAP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1PXQ9 TRAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9NSW0 TRAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F5H897 TRAP1 "Heat shock protein 75 kDa, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|I3L0K7 TRAP1 "TNF receptor-associated protein 1, isoform CRA_b" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q12931 TRAP1 "Heat shock protein 75 kDa, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B0TP05HTPG_SHEHHNo assigned EC number0.31310.86580.6666yesN/A
A1VTA5HTPG_POLNANo assigned EC number0.30810.90650.7090yesN/A
Q4ZUW2HTPG_PSEU2No assigned EC number0.30720.90850.7039yesN/A
Q88FB9HTPG_PSEPKNo assigned EC number0.31320.90650.7034yesN/A
A3QF50HTPG_SHELPNo assigned EC number0.30760.90240.6948yesN/A
A9NB44HTPG_COXBRNo assigned EC number0.31420.85560.6650yesN/A
Q24VT7HTPG_DESHYNo assigned EC number0.33190.89830.7198yesN/A
A8FX83HTPG_SHESHNo assigned EC number0.31310.86380.6661yesN/A
Q6ARM0HTPG_DESPSNo assigned EC number0.33940.90440.7154yesN/A
Q4KFX8HTPG_PSEF5No assigned EC number0.3040.90240.7003yesN/A
A6V7J7HTPG_PSEA7No assigned EC number0.30890.89630.6955yesN/A
Q31F72HTPG_THICRNo assigned EC number0.31970.85560.6682yesN/A
Q39SQ3HTPG_GEOMGNo assigned EC number0.30440.93900.7107yesN/A
Q8KE61HTPG_CHLTENo assigned EC number0.31500.88820.6947yesN/A
Q9CQN1TRAP1_MOUSENo assigned EC number0.48380.91860.6402yesN/A
Q2TBI4TRAP1_BOVINNo assigned EC number0.48170.91460.6401yesN/A
Q3KFT8HTPG_PSEPFNo assigned EC number0.30920.90650.7034yesN/A
Q86L04TRAP1_DICDINo assigned EC number0.37550.88610.6132yesN/A
A5GER7HTPG_GEOURNo assigned EC number0.31060.93290.7116yesN/A
A8H2R4HTPG_SHEPANo assigned EC number0.31130.85160.6567yesN/A
Q2KYY2HTPG_BORA1No assigned EC number0.30230.85970.6714yesN/A
Q0A738HTPG_ALHEHNo assigned EC number0.30500.92470.6978yesN/A
Q48K64HTPG_PSE14No assigned EC number0.3080.90440.7007yesN/A
A4SLY0HTPG_AERS4No assigned EC number0.31420.85560.6609yesN/A
A4IZQ6HTPG_FRATWNo assigned EC number0.30160.89630.7022yesN/A
Q9I3C5HTPG_PSEAENo assigned EC number0.30890.89630.6955yesN/A
Q12931TRAP1_HUMANNo assigned EC number0.47360.91860.6420yesN/A
A0KL53HTPG_AERHHNo assigned EC number0.32200.86170.6614yesN/A
B0U0M7HTPG_FRAP2No assigned EC number0.30470.90650.7101yesN/A
Q883Y9HTPG_PSESMNo assigned EC number0.30720.90850.7039yesN/A
A6VXW3HTPG_MARMSNo assigned EC number0.30230.92270.7071yesN/A
Q6FF82HTPG_ACIADNo assigned EC number0.31080.91460.7031yesN/A
P61185HTPG_GEOSLNo assigned EC number0.31450.93900.7107yesN/A
Q5XHZ0TRAP1_RATNo assigned EC number0.48170.91860.6402yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
PRK05218613 PRK05218, PRK05218, heat shock protein 90; Provisi 1e-128
COG0326623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 1e-95
PTZ00272701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 2e-64
pfam00183529 pfam00183, HSP90, Hsp90 protein 1e-63
PTZ00130814 PTZ00130, PTZ00130, heat shock protein 90; Provisi 1e-45
PRK14083601 PRK14083, PRK14083, HSP90 family protein; Provisio 7e-05
PRK14083601 PRK14083, PRK14083, HSP90 family protein; Provisio 0.002
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information 
 Score =  386 bits (994), Expect = e-128
 Identities = 154/497 (30%), Positives = 254/497 (51%), Gaps = 62/497 (12%)

Query: 1   SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKI 60
            G Y I E    E+GT+I +HLK D  EF DE  + ++I+KYS+F+  PI +   +   I
Sbjct: 157 EGEYTIEEIEKEERGTEITLHLKEDEDEFLDEWRIRSIIKKYSDFIPVPIKLEKEEEETI 216

Query: 61  QPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFY 120
                                     N               LW      +  EE+ EFY
Sbjct: 217 --------------------------NSAS-----------ALWTRSKSEITDEEYKEFY 239

Query: 121 RYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAK 180
           +++++  D P F +H   + P     +LY P+  P     +R+ + G+ LY +R+ I   
Sbjct: 240 KHLAHDFDDPLFWIHNNVEGPFEYTGLLYIPKKAPFDL-FNRDRKGGLKLYVKRVFIMDD 298

Query: 181 AENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVE 240
           AE +LP++LRFVKGV+DSED+PLN+SRE+LQ   ++ K+R  +T ++L  L+  +K D E
Sbjct: 299 AEELLPEYLRFVKGVIDSEDLPLNVSREILQEDRVVKKIRKAITKKVLDELEKLAKNDRE 358

Query: 241 NYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQK 300
            Y  F+K++   +KEG+    D   +E++AKLLR+ S+    G  ++L EY+E++ EGQK
Sbjct: 359 KYEKFWKEFGPVLKEGLYE--DFANREKLAKLLRFAST--HEGKYVSLAEYVERMKEGQK 414

Query: 301 DIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEK--- 357
            IYY+   SR  A +SP+LE  +++ ++VL   +P DE  +  L  F      SV +   
Sbjct: 415 KIYYITGDSREAAKNSPHLELFKKKGIEVLLLTDPIDEFWISYLEEFDGKPFKSVARGDL 474

Query: 358 EMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEE 417
           ++ ++ EE+K  +    +         L+  ++E + +KV  V+++ +L   P  +  +E
Sbjct: 475 DLGKEDEEEKEEKEEAEEEF-----KPLLERLKEALGDKVKDVRLSHRLTDSPACLVADE 529

Query: 418 ---MAAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQ 474
                     LK   Q + E       +P LEINP HP++KKLA    ++ A  + + + 
Sbjct: 530 GDMSTQMEKLLKAAGQEVPES------KPILEINPNHPLVKKLADE--ADEAKFKDLAEL 581

Query: 475 LFSNAMVVAGL-VEDPR 490
           L+  A++  G  +EDP 
Sbjct: 582 LYDQALLAEGGSLEDPA 598

Length = 613
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information
>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional Back     alignment and domain information
>gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 492
PF00183531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 100.0
PTZ00272701 heat shock protein 83 kDa (Hsp83); Provisional 100.0
PTZ00130814 heat shock protein 90; Provisional 100.0
KOG0019|consensus656 100.0
KOG0020|consensus785 100.0
COG0326623 HtpG Molecular chaperone, HSP90 family [Posttransl 100.0
PRK05218613 heat shock protein 90; Provisional 100.0
PRK14083601 HSP90 family protein; Provisional 100.0
PF00183531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 86.17
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information 
Probab=100.00  E-value=2.6e-124  Score=1008.42  Aligned_cols=448  Identities=37%  Similarity=0.665  Sum_probs=362.8

Q ss_pred             hhhCHHHHHHHHHHhcCcccccceecccccCCCCcccccCCCCCChHHHHHh----------------hhh--ccCC--C
Q psy15896         28 EFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEF----------------YRY--ISNS--N   87 (492)
Q Consensus        28 efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~~~~~~v~~~e~~~~----------------~~~--~~~~--~   87 (492)
                      |||++++|++||+|||+||+|||+|+.++..+         .++++++..+.                .++  .+++  +
T Consensus         1 eyl~~~klk~lvkkyS~Fi~~PI~l~~~k~~~---------~ev~~ee~~~~~~~~~~~~~~~~~~~~~e~~~~eee~~~   71 (531)
T PF00183_consen    1 EYLEEYKLKELVKKYSQFISFPIYLWVEKEEE---------KEVPDEEEEEEEEEKEEEEKKEEEEEKVEEEDEEEEKEE   71 (531)
T ss_dssp             GGGSHHHHHHHHHHHHTTSSSEEEEEEEEEEE---------CCCEHHHHHH---HTT-TT--------SSEEEE----S-
T ss_pred             CcccHHHHHHHHHhhccccccceeEeeecccc---------ccCCcchhhhhhhhhhhcccccccccccccccccccccc
Confidence            69999999999999999999999998655432         23333332210                000  0011  1


Q ss_pred             CCCc------ce--ecccCCCCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeeecCCcceEEEEEeeCCCCC-cc
Q psy15896         88 DQPR------FV--LHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPG-LF  158 (492)
Q Consensus        88 ~~~~------~~--~~~~n~~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~llyiP~~~p~-~~  158 (492)
                      ++++      ..  |..+|+++|||+|+|++||+|||.+|||+++++|++||+|+||++|||++|+||||||+++|. +|
T Consensus        72 ~~~k~k~~~~~~~~~~~vN~~~piW~r~~~eit~eey~~Fyk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~  151 (531)
T PF00183_consen   72 KKPKTKKVKETVWEWEQVNTQKPIWTRDPKEITDEEYKEFYKSLSKDYDDPLFWIHFNAEGPFEFKSLLYIPKRAPFDLF  151 (531)
T ss_dssp             TTEEEEECCEEEEEEEECS--S-GGGSSGGGS-HHHHHHHHHHHHTTSS-ESEEEEEEEESSSEEEEEEEEESS-SCCCC
T ss_pred             ccccccccccceeecccccccCcccccchhccchHHHHHHHHHhhhcccCchhheeccccccceeeEEEEeCCCCchhhh
Confidence            1111      12  455999999999999999999999999999999999999999999999999999999999994 45


Q ss_pred             cccccccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy15896        159 EMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRD  238 (492)
Q Consensus       159 ~~~~~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ki~~~l~~la~~d  238 (492)
                      +.. ..+++|+||||||||||+|++|||+||+||||||||+|||||||||+||+|++|++|++.|++||+++|.++++ |
T Consensus       152 ~~~-~~~~~ikLY~rrVfI~d~~~~llP~~L~FvkGVVDS~DLPLNVSRE~LQ~~~~lk~I~~~l~kkvl~~l~~l~~-d  229 (531)
T PF00183_consen  152 END-KKKNGIKLYVRRVFITDNFEELLPEYLRFVKGVVDSDDLPLNVSRETLQQNKLLKKIRKKLVKKVLDMLKKLAK-D  229 (531)
T ss_dssp             SSS-TT--SEEEEETTEEEESSCGGSS-GGGTT-EEEEEESSS-SSCTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHT-S
T ss_pred             hhh-hccccceeeeecccccchhhcccchhhheeeeeeeccccCCccchhhhhccHHHHHHHHHHHHHHHHHHHHHhh-h
Confidence            432 35789999999999999999999999999999999999999999999999999999999999999999999985 8


Q ss_pred             HHHHHHHHHHhhhhhheeeccCcChhhHHHHhhhccceecccCCCceecHHHHHHHhcCCCccEEEEeCCCHhHHhcChH
Q psy15896        239 VENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPY  318 (492)
Q Consensus       239 ~e~y~~f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~~~~~~~~sp~  318 (492)
                      +++|.+||++||.+||+||++  |..||++|++||||+||+++ |+++||++|++||+++|+.|||++|+|++.+++|||
T Consensus       230 ~e~y~~f~~~~g~~iK~G~~e--D~~n~~kl~~LLrf~ss~~~-~~~~SL~eYv~rmke~Qk~IYY~~g~s~~~~~~SP~  306 (531)
T PF00183_consen  230 REKYEKFWKEFGKFIKEGVIE--DFKNREKLAKLLRFESSKSE-GKLTSLDEYVERMKEGQKQIYYLTGESREEAEQSPY  306 (531)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH---GGGHHHHHTT-EEEETTTT-TSEEEHHHHHHTS-TT-SEEEEEESSSHHHHHTSGG
T ss_pred             HHHHHHHHHHHhHHHHhHHhh--hhhhhhhcccceeeeccccc-cccccHHHhhhccccccccceEEecchHHHHhhccc
Confidence            999999999999999999996  89999999999999999865 689999999999999999999999999999999999


Q ss_pred             HHHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeecccccccCcccccccCCCCCCCCCcchHHHHHHHHHHHhccceE
Q psy15896        319 LEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVH  398 (492)
Q Consensus       319 le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~e~~~L~~~~k~~L~~~V~  398 (492)
                      +|.|++||||||||++|||++||++|.+|+|++|++|++++++....+++..   ..+..++++++|++|+|++||++|.
T Consensus       307 lE~~k~kG~EVL~l~dpIDe~~i~~L~e~~gkkf~~I~ke~l~l~~~e~ek~---~~e~~~~~~~~L~~~~k~~L~~kV~  383 (531)
T PF00183_consen  307 LEAFKKKGYEVLFLTDPIDEFVIQQLEEYEGKKFQSIDKEDLDLEEDEEEKK---EDEELKEEFKPLTEWLKELLGDKVE  383 (531)
T ss_dssp             GHHHHHCT--EEEE-SHHHHHHHHHHSEETTEEEEETTBSSSSSSTSHHHHH---HHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred             hhhHHhhCceEEEeCCchHHHHHHHHhhccccccccccccccccccchhhhh---hhhhhhhHHHHHHHHHHhhhhhhhh
Confidence            9999999999999999999999999999999999999999765332211110   0112456799999999999999999


Q ss_pred             EEEEEeecCCccEEEeecchH---HHHHHHHHHhccCchhhhccCCCceEEEcCCCHHHHHHHhhcC--CChHHHHHHHH
Q psy15896        399 SVKITTKLDSHPCVVTVEEMA---AARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSS--SNPALAELVVQ  473 (492)
Q Consensus       399 ~V~vS~rL~~sPa~iv~~e~~---~m~~~~k~~~~~~~~~~~~~~~k~iLEINp~HplI~~L~~l~~--~d~~~~~~~~~  473 (492)
                      +|++|.||++|||||+++++|   .|+|||++|+........++.+++||||||+||||++|+++..  .+++.++.+|+
T Consensus       384 ~V~vS~RL~~sPa~lv~~e~g~s~~Merimkaqa~~~~~~~~~~~~kkiLEINp~HPLIk~L~~~~~~d~~d~~~~~la~  463 (531)
T PF00183_consen  384 KVKVSNRLVDSPAVLVSSEYGWSANMERIMKAQAMADMSMQEYMPSKKILEINPNHPLIKKLLKLVEKDEDDELAKDLAE  463 (531)
T ss_dssp             EEEE-SSSSSSSEEEEE-SSSB-HHHHHHHHHHHCCSTTTSSTSC--EEEEE-TTSHHHHHHHHHHHCCTTHHHHHHHHH
T ss_pred             eecccccccCCcceeecccchhHHHHHHHhhhhccccccccccccccceeecCCCCHHHHHHHhhhcccchhhHHHHHHH
Confidence            999999999999999999864   6999999987543333345567899999999999999999764  34567899999


Q ss_pred             HHHHHHHHhcCC-CCCCCCC
Q psy15896        474 QLFSNAMVVAGL-VEDPRTI  492 (492)
Q Consensus       474 ~Lyd~AlL~~G~-~~dp~~~  492 (492)
                      ||||+|+|++|+ ++||++|
T Consensus       464 ~LyD~AlL~~G~~l~dp~~F  483 (531)
T PF00183_consen  464 QLYDTALLASGFELEDPAAF  483 (531)
T ss_dssp             HHHHHHHHHTTSS-SSHHHH
T ss_pred             HHhhhhhhhcCCCcccHHHH
Confidence            999999999998 8999754

They assist in the folding of nascent polypeptide chains, and are also involved in the re-folding of denatured proteins following proteotoxic stress. As their name implies, the heat shock proteins were first identified as proteins that were up-regulated under conditions of elevated temperature. However, subsequent studies have shown that increased Hsp expression is induced by a variety of cellular stresses, including oxidative stress and inflammation. Five major Hsp families have been determined, and are categorized according to their molecular size (Hsp100, Hsp90, Hsp70, Hsp60, and the small Hsps). Hsps are involved in a variety of cellular processes that are ATP-dependent. These include: prevention of protein aggregation, protein degradation, protein trafficking, and maintenance of signalling proteins in a conformation that permits activation. Hsp90 chaperones are unique in their ability to regulate a specific subset of cellular signalling proteins that have been implicated in disease processes, including intracellular protein kinases, steroid hormone receptors, and growth factor receptors [].; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding, 0006950 response to stress; PDB: 3K99_D 2H55_A 3RLP_A 1OSF_A 3R4M_A 1YES_A 1UY9_A 3FT8_A 2YE2_A 2QF6_A ....
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>KOG0019|consensus Back     alignment and domain information
>KOG0020|consensus Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
2iop_A624 Crystal Structure Of Full-Length Htpg, The Escheric 9e-54
1y4s_A559 Conformation Rearrangement Of Heat Shock Protein 90 2e-52
3hjc_A444 Crystal Structure Of The Carboxy-Terminal Domain Of 2e-52
2o1u_A666 Structure Of Full Length Grp94 With Amp-Pnp Bound L 9e-50
2cge_A405 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 3e-48
2cg9_A677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 4e-48
3q6m_A448 Crystal Structure Of Human Mc-Hsp90 In C2221 Space 1e-46
2gq0_A303 Crystal Structure Of The Middle Domain Of Htpg, The 6e-46
1hk7_A288 Middle Domain Of Hsp90 Length = 288 5e-45
1usv_A260 The Structure Of The Complex Between Aha1 And Hsp90 6e-45
1usu_A260 The Structure Of The Complex Between Aha1 And Hsp90 1e-44
2o1t_A450 Structure Of Middle Plus C-Terminal Domains (M+c) O 2e-44
2o1w_A506 Structure Of N-Terminal Plus Middle Domains (N+m) O 4e-43
3pry_A268 Crystal Structure Of The Middle Domain Of Human Hsp 2e-39
1y6z_A263 Middle Domain Of Plasmodium Falciparum Putative Hea 2e-33
3k60_B223 Crystal Structure Of N-Terminal Domain Of Plasmodiu 2e-04
3opd_A231 Crystal Structure Of The N-Terminal Domain Of An Hs 3e-04
3o6o_A214 Crystal Structure Of The N-Terminal Domain Of An Hs 3e-04
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 Back     alignment and structure 
Iteration: 1

 Score =  207 bits (527), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 253/498 (50%), Gaps = 56/498 (11%)
Query: 2   GTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQ 61
           G Y + +    ++GT+I +HL+    EF D+  V ++I KYS+ +  P+ +         
Sbjct: 160 GEYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--------- 210
Query: 62  PLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYR 121
                E +  K  E V  +  I+ +                LW      +  EE+ EFY+
Sbjct: 211 -----EKREEKDGETVISWEKINKAQ--------------ALWTRNKSEITDEEYKEFYK 251
Query: 122 YISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEM-SRETEVGVSLYTRRILIKAK 180
           +I++  + P    H R +      S+LY P   P  ++M +R+ + G+ LY +R+ I   
Sbjct: 252 HIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAP--WDMWNRDHKHGLKLYVQRVFIMDD 309
Query: 181 AENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVE 240
           AE  +P +LRFV+G++DS D+PLN+SRE+LQ+S +   LRN LT R+L+ L+  +K D E
Sbjct: 310 AEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAE 369
Query: 241 NYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGT-LITLPEYIEKLGEGQ 299
            Y  F++ + L +KEG    +D   +E IAKLLR+ S+  ++    ++L +Y+ ++ EGQ
Sbjct: 370 KYQTFWQQFGLVLKEG--PAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQ 427
Query: 300 KDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEM 359
           + IYY+ A S A A SSP+LE LR++ ++VL   +  DE ++  L  F      SV K  
Sbjct: 428 EKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSK-- 485
Query: 360 RQDKEEDKSGQILGPDSLPSS-DADKLVSWIEEKMK----NKVHSVKITTKLDSHPCVVT 414
                 D+S + L  +   S+ +A+K ++   +++K     +V  V++T +L   P +V+
Sbjct: 486 -----VDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVS 540
Query: 415 --VEEMAAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKXXXXXXXXXXXXXXVV 472
              +EM+     L   +      Q+   ++   E+NP H ++K+               V
Sbjct: 541 TDADEMSTQMAKLFAAAG-----QKVPEVKYIFELNPDHVLVKRAADTEDEAKFSEW--V 593
Query: 473 QQLFSNAMVVA-GLVEDP 489
           + L   A++   G +EDP
Sbjct: 594 ELLLDQALLAERGTLEDP 611
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 Back     alignment and structure
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 Back     alignment and structure
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 Back     alignment and structure
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 Back     alignment and structure
>pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 Back     alignment and structure
>pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 Back     alignment and structure
>pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 Back     alignment and structure
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 Back     alignment and structure
>pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 Back     alignment and structure
>pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 Back     alignment and structure
>pdb|3K60|B Chain B, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 Back     alignment and structure
>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 Back     alignment and structure
>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query492
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 1e-166
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 1e-151
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 1e-138
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 1e-110
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 1e-100
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 1e-100
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 6e-98
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 5e-86
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 2e-81
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 8e-81
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 1e-80
1y6z_A263 Heat shock protein, putative; chaperone, structura 9e-79
3peh_A281 Endoplasmin homolog; structural genomics, structur 5e-26
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 3e-14
2ior_A235 Chaperone protein HTPG; heat shock protein, HSP90; 4e-14
2wer_A220 ATP-dependent molecular chaperone HSP82; ATPase, A 6e-13
1qy5_A269 Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N 7e-13
3ied_A272 Heat shock protein; HSP90, chaperone, structural g 1e-12
1yc1_A264 HSP 86, heat shock protein HSP 90-alpha; cell-cycl 4e-12
3nmq_A239 Heat shock protein HSP 90-beta; ATPase, chaperone- 4e-12
3o0i_A256 HSP90AA1 protein; HSP90 heat-shock proteins, chape 6e-12
3t0h_A228 Heat shock protein HSP 90-alpha; chaperone, ATPase 6e-12
2gqp_A236 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 6e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 Back     alignment and structure
 Score =  483 bits (1246), Expect = e-166
 Identities = 138/494 (27%), Positives = 240/494 (48%), Gaps = 42/494 (8%)

Query: 1   SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKI 60
            G Y + +    ++GT+I +HL+    EF D+  V ++I KYS+ +  P+ +   +    
Sbjct: 159 EGEYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREE--- 215

Query: 61  QPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFY 120
                 + ++V   E +       N                 LW      +  EE+ EFY
Sbjct: 216 -----KDGETVISWEKI-------NKAQ-------------ALWTRNKSEITDEEYKEFY 250

Query: 121 RYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMSRETEVGVSLYTRRILIKAK 180
           ++I++  + P    H R +      S+LY P   P     +R+ + G+ LY +R+ I   
Sbjct: 251 KHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDM-WNRDHKHGLKLYVQRVFIMDD 309

Query: 181 AENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVE 240
           AE  +P +LRFV+G++DS D+PLN+SRE+LQ+S +   LRN LT R+L+ L+  +K D E
Sbjct: 310 AEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAE 369

Query: 241 NYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQE-AGTLITLPEYIEKLGEGQ 299
            Y  F++ + L +KEG     D   +E IAKLLR+ S+  + +   ++L +Y+ ++ EGQ
Sbjct: 370 KYQTFWQQFGLVLKEGPAE--DFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQ 427

Query: 300 KDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEM 359
           + IYY+ A S A A SSP+LE LR++ ++VL   +  DE ++  L  F      SV K  
Sbjct: 428 EKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVD 487

Query: 360 RQ-DKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEM 418
              +K  D+  +               +  ++  +  +V  V++T +L   P +V+ +  
Sbjct: 488 ESLEKLADEVDE---SAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDAD 544

Query: 419 AAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLFSN 478
             +    K  +      Q+   ++   E+NP H ++K+ A   + + A     V+ L   
Sbjct: 545 EMSTQMAKLFAAA---GQKVPEVKYIFELNPDHVLVKRAA--DTEDEAKFSEWVELLLDQ 599

Query: 479 AMVVAG-LVEDPRT 491
           A++     +EDP  
Sbjct: 600 ALLAERGTLEDPNL 613
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 Back     alignment and structure
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 Back     alignment and structure
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 Back     alignment and structure
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 Back     alignment and structure
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 Back     alignment and structure
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 Back     alignment and structure
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 Back     alignment and structure
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 Back     alignment and structure
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 Back     alignment and structure
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 100.0
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 100.0
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 100.0
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 100.0
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 100.0
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 100.0
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 100.0
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 100.0
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 100.0
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 100.0
1y6z_A263 Heat shock protein, putative; chaperone, structura 100.0
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 99.94
3peh_A281 Endoplasmin homolog; structural genomics, structur 99.41
3nmq_A239 Heat shock protein HSP 90-beta; ATPase, chaperone- 99.35
1qy5_A269 Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N 99.11
3o0i_A256 HSP90AA1 protein; HSP90 heat-shock proteins, chape 99.07
3t0h_A228 Heat shock protein HSP 90-alpha; chaperone, ATPase 99.04
2gqp_A236 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 99.02
1yc1_A264 HSP 86, heat shock protein HSP 90-alpha; cell-cycl 98.85
2wer_A220 ATP-dependent molecular chaperone HSP82; ATPase, A 98.81
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 90.51
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 86.26
1b63_A333 MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A 85.29
1y6z_A263 Heat shock protein, putative; chaperone, structura 84.77
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 83.83
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=1.5e-123  Score=1020.54  Aligned_cols=482  Identities=28%  Similarity=0.520  Sum_probs=392.2

Q ss_pred             CCceEEEec---CCCCCCcEEEEEeccchhhhhCHHHHHHHHHHhcCcccccceecccccCCCCcccccCCC-C--CC--
Q psy15896          1 SGTYEITEC---PTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPK-S--VK--   72 (492)
Q Consensus         1 ~g~y~i~~~---~~~~~GT~I~L~lk~d~~efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~~~~~-~--v~--   72 (492)
                      +|+|+|.++   +..+|||+|+||||+++.+||++++|++||+|||+||+|||+|+.++..... ....... +  .+  
T Consensus       153 ~~~~ti~~~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~-~~~~e~~~~~~~~~~  231 (677)
T 2cg9_A          153 GGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKE-VPIPEEEKKDEEKKD  231 (677)
T ss_dssp             SSEEEEEECCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC----------------
T ss_pred             CceEEEeecCCCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccC-cCcchhhhccccccc
Confidence            368999985   5679999999999999999999999999999999999999999743321100 0000000 0  00  


Q ss_pred             --hHHHHHhhhhccC------CCCC-C-----cceecccCCCCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeee
Q psy15896         73 --LEEHVEFYRYISN------SNDQ-P-----RFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRT  138 (492)
Q Consensus        73 --~~e~~~~~~~~~~------~~~~-~-----~~~~~~~n~~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~  138 (492)
                        +++-.+....+++      +..+ +     ...|..+|+.+|||+|+|++||+|||.+|||+++++|++||+|+||++
T Consensus       232 e~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~v  311 (677)
T 2cg9_A          232 EEKKDEDDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSV  311 (677)
T ss_dssp             ------------------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEE
T ss_pred             cccccccccccccccccchhhhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCCCCchheEEecc
Confidence              0000000000100      0011 1     123556999999999999999999999999999999999999999999


Q ss_pred             cCCcceEEEEEeeCCCCC-cccccccccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHH
Q psy15896        139 DAPLSIKSVLYFPETKPG-LFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLIN  217 (492)
Q Consensus       139 e~~~~~~~llyiP~~~p~-~~~~~~~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~  217 (492)
                      ||+++|+||||||+++|. +|+. ++.+++|+||||||||||+|++|||+||+||||||||+|||||||||+||+|++|+
T Consensus       312 eg~~~~~~lLyiP~~ap~d~~~~-~~~~~~ikLYv~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk  390 (677)
T 2cg9_A          312 EGQLEFRAILFIPKRAPFDLFES-KKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMK  390 (677)
T ss_dssp             CSSSCEEEEEEECSSCCC----------CCSEEEETTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHH
T ss_pred             cccceEEEEEEEcCCCchhhhhh-hhccCCeEEEEeeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHH
Confidence            999999999999999994 3321 35679999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHhhhhhheeeccCcChhhHHHHhhhccceecccCCCceecHHHHHHHhcC
Q psy15896        218 KLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGE  297 (492)
Q Consensus       218 ~I~~~l~~ki~~~l~~la~~d~e~y~~f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ss~~~~~~~~sL~eYv~rmk~  297 (492)
                      +||+.|++||+++|.++|+ |+++|++||++||.+||+|+++  |+.||++|++||||+||+++ ++++||+||++|||+
T Consensus       391 ~I~~~l~kkvl~~l~~la~-~~e~y~~f~~~fg~~lK~G~~e--D~~nr~~l~~llrf~ss~~~-~~~~sL~eYv~rmke  466 (677)
T 2cg9_A          391 VIRKNIVKKLIEAFNEIAE-DSEQFEKFYSAFSKNIKLGVHE--DTQNRAALAKLLRYNSTKSV-DELTSLTDYVTRMPE  466 (677)
T ss_dssp             HHHHHHHHHHHHHHHHHHS-CSHHHHHHHHHHHHHHHHHHHH--CSSSHHHHHTTCCBEESSCT-TSCBCSTTHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHhHHhhhhhcc--CHHHHHHHHhheEeeecCCC-CceeeHHHHHHhccc
Confidence            9999999999999999997 6899999999999999999996  78999999999999999864 579999999999999


Q ss_pred             CCccEEEEeCCCHhHHhcChHHHHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeecccccccCcccccccCCCCCCCC
Q psy15896        298 GQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSL  377 (492)
Q Consensus       298 ~Q~~IYY~~~~~~~~~~~sp~le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~  377 (492)
                      +|+.|||++|+|++++++|||+|.|++||+|||||++||||+||++|.+|+|++|++|+++ ++...++++.   +..+.
T Consensus       467 ~Q~~IyY~t~~s~~~~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~~e~~~---~~~~~  542 (677)
T 2cg9_A          467 HQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEEK---AEREK  542 (677)
T ss_dssp             TCCEEEEEECSCSTTTTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCSSTTSS---TTHHH
T ss_pred             cCceEEEEeCCCHHHHHhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-cccccchhhh---hhhhh
Confidence            9999999999999999999999999999999999999999999999999999999999999 5432221111   11112


Q ss_pred             CcchHHHHHHHHHHHhccceEEEEEEeecCCccEEEeecch---HHHHHHHHHHhccCchhhhccCCCceEEEcCCCHHH
Q psy15896        378 PSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEM---AAARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVI  454 (492)
Q Consensus       378 ~~~e~~~L~~~~k~~L~~~V~~V~vS~rL~~sPa~iv~~e~---~~m~~~~k~~~~~~~~~~~~~~~k~iLEINp~HplI  454 (492)
                      .++++++|++|+|++|+++|.+|++|+||++||||||++++   +.|+|||++|++.++.+..++.++++|||||+||||
T Consensus       543 ~~~~~~~L~~~~k~~L~~~v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli  622 (677)
T 2cg9_A          543 EIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPII  622 (677)
T ss_dssp             HHGGGHHHHHHHHHTTCSSCSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------CEEEECTTCHHH
T ss_pred             hHHHHHHHHHHHHHhcCCcceEEEEeccCCCCCEEEEeCcccccHHHHHHHHHhhccccccccccccCceEEEcCCCHHH
Confidence            35679999999999999999999999999999999999987   468888888765433333345678999999999999


Q ss_pred             HHHHhhcC---CChHHHHHHHHHHHHHHHHhcCC-CCCCCCC
Q psy15896        455 KKLASLSS---SNPALAELVVQQLFSNAMVVAGL-VEDPRTI  492 (492)
Q Consensus       455 ~~L~~l~~---~d~~~~~~~~~~Lyd~AlL~~G~-~~dp~~~  492 (492)
                      ++|+.+..   .+++.++++|++|||+|+|++|+ ++||+.|
T Consensus       623 ~~L~~~~~~d~~~~~~~~~~~~~Lyd~All~~G~~l~dp~~f  664 (677)
T 2cg9_A          623 KELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSF  664 (677)
T ss_dssp             HHHHHHHHTCCSSCSSSSTTHHHHHHHHHHHTTCCCSSTTHH
T ss_pred             HHHHHhhhccccCHHHHHHHHHHHHHHHHHhCCCCccCHHHH
Confidence            99987643   24556889999999999999998 8999853
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Back     alignment and structure
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 Back     alignment and structure
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Back     alignment and structure
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Back     alignment and structure
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Back     alignment and structure
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Back     alignment and structure
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Back     alignment and structure
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Back     alignment and structure
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 492
d1usua_256 d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye 3e-66
d1sf8a_115 d.271.1.1 (A:) Chaperone protein HtpG {Escherichia 4e-16
d1uyla_208 d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 2e-11
d2iwxa1213 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo 4e-10
d2gqpa1227 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) 5e-10
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Hsp90 middle domain
domain: Heat shock protein hsp82
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  212 bits (540), Expect = 3e-66
 Identities = 84/257 (32%), Positives = 140/257 (54%), Gaps = 4/257 (1%)

Query: 102 PLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEMS 161
           PLW   P  +  EE+  FY+ ISN  + P +V H+  +  L  +++L+ P+  P     S
Sbjct: 4   PLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFES 63

Query: 162 RETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRN 221
           ++ +  + LY RR+ I  +AE+++P+WL FVKGVVDSED+PLNLSRE+LQ + ++  +R 
Sbjct: 64  KKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRK 123

Query: 222 VLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQE 281
            +  ++++   + ++   E +  FY  +S  IK G+                    S  E
Sbjct: 124 NIVKKLIEAFNEIAEDS-EQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 182

Query: 282 AGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELIL 341
              L +L +Y+ ++ E QK+IYY+   S      SP+L+AL+ +  +VLF  +P DE   
Sbjct: 183 ---LTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAF 239

Query: 342 LQLRSFQNFNLTSVEKE 358
            QL+ F+   L  + K+
Sbjct: 240 TQLKEFEGKTLVDITKD 256
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 Back     information, alignment and structure
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 Back     information, alignment and structure
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query492
d1usua_256 Heat shock protein hsp82 {Baker's yeast (Saccharom 100.0
d1sf8a_115 Chaperone protein HtpG {Escherichia coli [TaxId: 5 99.94
d2gqpa1227 HSP90 {Dog (Canis familiaris) [TaxId: 9615]} 99.47
d1usua_256 Heat shock protein hsp82 {Baker's yeast (Saccharom 81.91
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Hsp90 middle domain
domain: Heat shock protein hsp82
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-88  Score=664.87  Aligned_cols=254  Identities=37%  Similarity=0.721  Sum_probs=234.8

Q ss_pred             CCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeeecCCcceEEEEEeeCCCCC-cccccccccCceEEEEeeEEec
Q psy15896        100 NLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPG-LFEMSRETEVGVSLYTRRILIK  178 (492)
Q Consensus       100 ~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~llyiP~~~p~-~~~~~~~~~~~ikLYv~rVfI~  178 (492)
                      +||||+|+|++||+|||++|||++++++++||+|+||++|||++|+||||||+.+|. .|+. +..++||+||||||||+
T Consensus         2 tkpiW~r~~~eit~eeY~~FYk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~-~~~~~~ikLY~~rVfI~   80 (256)
T d1usua_           2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFES-KKKKNNIKLYVRRVFIT   80 (256)
T ss_dssp             CCCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC-----CCEEEEETTEEEE
T ss_pred             CCCCccCCchhCCHHHHHHHHHhhcCCccCCceeEEeeeeeeEEEEEEEEecccCcchhhhh-hhhcCCeEEEEEeeeec
Confidence            689999999999999999999999999999999999999999999999999999994 4433 34678999999999999


Q ss_pred             cccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHhhhhhheeec
Q psy15896        179 AKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIV  258 (492)
Q Consensus       179 d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ki~~~l~~la~~d~e~y~~f~~~~~~~lK~G~~  258 (492)
                      |+|++|||+||+||||||||+|||||||||+||+|+++++|++.|++||+++|+.++ +|+++|.+||++||.+||+||+
T Consensus        81 d~~~~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~-~d~eky~~fw~~fg~~lK~G~~  159 (256)
T d1usua_          81 DEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIA-EDSEQFEKFYSAFSKNIKLGVH  159 (256)
T ss_dssp             SCCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhh-hCHHHHHHHHHHHhHHHhhhcc
Confidence            999999999999999999999999999999999999999999999999999998875 5999999999999999999999


Q ss_pred             cCcChhhHHHHhhhccceecccCCCceecHHHHHHHhcCCCccEEEEeCCCHhHHhcChHHHHHhhCCcEEEEcCCcccH
Q psy15896        259 TTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDE  338 (492)
Q Consensus       259 ~~~D~~~~~~l~~llrF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~~~~~~~~sp~le~~~~kg~eVl~l~d~iDe  338 (492)
                      +  |..|++++++||||+||.++ ++++||+||++||+++|+.|||++|++++.+++|||+|.|++||+|||+|+|||||
T Consensus       160 ~--D~~~~e~l~~ll~f~ss~s~-~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP~lE~~k~kg~EVL~l~dpiDe  236 (256)
T d1usua_         160 E--DTQNRAALAKLLRYNSTKSV-DELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDE  236 (256)
T ss_dssp             H--CTTTHHHHHTTCEEEETTEE-EEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCTTHHHHHHTTCCEEEECSHHHH
T ss_pred             c--cHHHHHHHHHhhhhhccCCC-cceeeHHHHHhhccccccceEEEecCCHHHHHcCHHHHHHHHCCCEEEEecCchHH
Confidence            6  78999999999999999864 68999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCCceeecccc
Q psy15896        339 LILLQLRSFQNFNLTSVEKE  358 (492)
Q Consensus       339 ~~l~~l~~~~~~~~~~V~~~  358 (492)
                      +++++|.+|+|++|+||+++
T Consensus       237 ~~i~~l~e~~~kkf~sV~ke  256 (256)
T d1usua_         237 YAFTQLKEFEGKTLVDITKD  256 (256)
T ss_dssp             HHHHHHCEETTEEEEETTCC
T ss_pred             HHHHHHHHhCCCceeecCCC
Confidence            99999999999999999874
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure