Psyllid ID: psy1596

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----
Protein Sequence
MPVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHccccccccccccccccccEEccccccHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHcccccEEEEEcccccHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHcccEEEEEHHHHcccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHccHHHHHHHHHHHcccccccccccccEEEcccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccccEEEccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccEccccHHHHHHHHHHHHHHHHHHcccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHEEccHHHcHHHHHHHHHccEEEEEccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHcccEEEEEEHHHHccHHccHHHHHHHcccEEccccccccccEEEEEccccccc
Coil and Loop (DISEMBL)
mpvvpklipnqgetskqendlrnsdVGFYYLRHFAELIThwqspymhayfpalnsypsllGDMLSDAINCLGFTWVRTEYLRHqnrrcnnanvtCDVLIDINAacsttnskhhavektthykptspfqKVIGKLSSKIKSHNVVVteadkgnsivildrdkyssKVLDFVskenatptkdptpsldKELLVIFgflrppnfitfqttASESTLICLLAGRTEAIRKYQqshpelehaEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYiesddklsLRGDKLIEAIERDkkkhlipffvcgtlgttgacafdnleelgpicekeglwlhvdaayagssficpeFRKWLAGVEYAnsiafnpskwlMVHFDCTAMW
Flexible Loop (DISEMBL)
mpvvpklipnqgetskqendlrnSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHhavektthykptspfqKVIGKLSSKIKSHnvvvteadkgnsivildrdkysSKVLDFVSkenatptkdptpslDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRyiesddklslRGDKLIEAIerdkkkhliPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANsiafnpskwLMVHFDCTAMW
Low Complexity Region (SEG)
MPVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW
Disordered region (IsUnstruct)
************************DVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAV****HY*****FQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFV****************KELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQ****LEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA**
Disordered Region (DISOPRED)
MPVVPKL************DLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW
Disordered Region (DISEMBL)
MPVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSK********PTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW
Disordered Region (DISPRO)
*P*VPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	375	2.2.26 [Sep-21-2011]
Q05733	847	Histidine decarboxylase O	yes	N/A	0.458	0.203	0.720	8e-74
P19113	662	Histidine decarboxylase O	yes	N/A	0.461	0.261	0.641	1e-64
Q5EA83	658	Histidine decarboxylase O	yes	N/A	0.461	0.262	0.630	6e-64
P23738	662	Histidine decarboxylase O	yes	N/A	0.461	0.261	0.635	2e-63
P16453	656	Histidine decarboxylase O	yes	N/A	0.461	0.263	0.624	6e-62
P27718	487	Aromatic-L-amino-acid dec	no	N/A	0.461	0.355	0.647	2e-61
O88533	480	Aromatic-L-amino-acid dec	no	N/A	0.461	0.360	0.618	3e-60
P22781	480	Aromatic-L-amino-acid dec	no	N/A	0.44	0.343	0.618	6e-60
P14173	480	Aromatic-L-amino-acid dec	no	N/A	0.461	0.360	0.630	7e-60
P20711	480	Aromatic-L-amino-acid dec	no	N/A	0.461	0.360	0.624	2e-59

>sp|Q05733|DCHS_DROME Histidine decarboxylase OS=Drosophila melanogaster GN=Hdc PE=2 SV=2

 Score =  277 bits (709), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 124/172 (72%), Positives = 148/172 (86%)

Query: 204 FQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL 263
            QTTASE+TL+CLLAGRT AI+++ + HP  + AEIN+RLVAYCSDQAHSSVEKA LIGL
Sbjct: 145 LQTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQAHSSVEKAALIGL 204

Query: 264 VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323
           V+MRYIE+DD L++RG  L EAIE D K+ L+PF+VC TLGTTG+C+FDNLEE+G +C +
Sbjct: 205 VRMRYIEADDDLAMRGKLLREAIEDDIKQGLVPFWVCATLGTTGSCSFDNLEEIGIVCAE 264

Query: 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             LWLHVDAAYAGS+FICPEFR WL G+E A+SIAFNPSKWLMVHFD TA+W
Sbjct: 265 HHLWLHVDAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALW 316

Required in photoreceptor transmitter synthesis.
Drosophila melanogaster (taxid: 7227)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 2

>sp|P19113|DCHS_HUMAN Histidine decarboxylase OS=Homo sapiens GN=HDC PE=1 SV=2

 Score =  247 bits (630), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 111/173 (64%), Positives = 136/173 (78%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q+T SESTLI LLA R   I + + S P+ + + +N+RLVAY SDQAHSSVEKAGLI 
Sbjct: 145 VLQSTVSESTLIALLAARKNKILEMKTSEPDADESCLNARLVAYASDQAHSSVEKAGLIS 204

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LVKM+++  DD  SLRG+ L +AIE DK++ L+P FVC TLGTTG CAFD L ELGPIC 
Sbjct: 205 LVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICA 264

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +EGLWLH+DAAYAG++F+CPEFR +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct: 265 REGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 317

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q5EA83|DCHS_BOVIN Histidine decarboxylase OS=Bos taurus GN=HDC PE=2 SV=1

 Score =  244 bits (624), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 109/173 (63%), Positives = 136/173 (78%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q+T SESTLI LLA R   I + + S PE + + +N+RLVAY SDQAHSSVEKAGLI 
Sbjct: 145 VLQSTVSESTLIALLAARKNKILEMKASEPEADESFLNARLVAYASDQAHSSVEKAGLIS 204

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LVKM+++  D+  SLRG+ L +AI+ D+++ L+P FVC TLGTTG CAFD L ELGPIC 
Sbjct: 205 LVKMKFLPVDENFSLRGEALQKAIKEDRERGLVPIFVCATLGTTGVCAFDCLSELGPICA 264

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +EGLWLH+DAAYAG++F+CPEFR +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct: 265 REGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 317

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 2

>sp|P23738|DCHS_MOUSE Histidine decarboxylase OS=Mus musculus GN=Hdc PE=1 SV=2

 Score =  243 bits (620), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 110/173 (63%), Positives = 131/173 (75%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q+T SESTLI LLA R   I   +   P+   + +N+RLVAY SDQAHSSVEKAGLI 
Sbjct: 152 VLQSTVSESTLIALLAARKNKILAMKACEPDANESSLNARLVAYTSDQAHSSVEKAGLIS 211

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LVK+R++  DD  SLRG+ L +AIE DK++ L+P FVC TLGTTG CAFD L ELGPIC 
Sbjct: 212 LVKIRFLPVDDNFSLRGEALQKAIEEDKQQGLVPVFVCATLGTTGVCAFDRLSELGPICA 271

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
            EGLWLHVDAAYAG++F+CPE R +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct: 272 SEGLWLHVDAAYAGTAFLCPELRGFLEGIEYADSFTFNPSKWMMVHFDCTGFW 324

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 2

>sp|P16453|DCHS_RAT Histidine decarboxylase OS=Rattus norvegicus GN=Hdc PE=2 SV=2

 Score =  238 bits (607), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 108/173 (62%), Positives = 131/173 (75%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q T SESTLI LLA R   I + +   P  + + +N+RLVAY SDQAHSSVEKAGLI 
Sbjct: 148 VLQRTVSESTLIALLAARKNKILEMKAHEPNADESSLNARLVAYASDQAHSSVEKAGLIS 207

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LVK++++  DD  SLRG+ L +AIE DK++ L+P FVC TLGTTG CAFD L ELGPIC 
Sbjct: 208 LVKIKFLPVDDNFSLRGEALQKAIEEDKQQGLVPVFVCATLGTTGVCAFDKLSELGPICA 267

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +EGLWLHVDAAYAG++F+ PE R +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct: 268 REGLWLHVDAAYAGTAFLRPELRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 320

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 2

>sp|P27718|DDC_BOVIN Aromatic-L-amino-acid decarboxylase OS=Bos taurus GN=DDC PE=2 SV=2

 Score =  236 bits (603), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 112/173 (64%), Positives = 132/173 (76%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q TASE+TL+ LLA RT+  R  Q + PEL  A I  +LVAY SDQAHSSVEKAGLIG
Sbjct: 143 VIQGTASEATLVALLAARTKVTRHLQAASPELMQAAIMEKLVAYASDQAHSSVEKAGLIG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            V+++ I SD K ++R   L EA+ERDK   LIPFFV  TLGTT  C+FDNL E+GPIC 
Sbjct: 203 GVRLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH 262

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +EGLWLHVDAAYAGS+FICPEFR  L GVE+A+S  FNP KWL+V+FDC+AMW
Sbjct: 263 EEGLWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315

Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

>sp|O88533|DDC_MOUSE Aromatic-L-amino-acid decarboxylase OS=Mus musculus GN=Ddc PE=2 SV=1

 Score =  232 bits (592), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 107/173 (61%), Positives = 132/173 (76%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q +ASE+TL+ LLA RT+ IR+ Q + PE   A I  +LVAY SDQAHSSVE+AGLIG
Sbjct: 143 VIQGSASEATLVALLAARTKVIRQLQAASPEFTQAAIMEKLVAYTSDQAHSSVERAGLIG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            +K++ + SD   S+R   L EA+ERDK   LIPFFV  TLGTT  C+FDNL E+GPIC 
Sbjct: 203 GIKLKAVPSDGNFSMRASALREALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICN 262

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +EG+WLH+DAAYAGS+FICPEFR  L GVE+A+S  FNP KWL+V+FDC+AMW
Sbjct: 263 QEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315

Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

>sp|P22781|DDC_CAVPO Aromatic-L-amino-acid decarboxylase OS=Cavia porcellus GN=DDC PE=2 SV=1

 Score =  231 bits (590), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 107/173 (61%), Positives = 132/173 (76%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q +ASE+TL+ LLA RT+ IR+ Q + PEL  A I  +LVAY SDQAHSSVE+AGLIG
Sbjct: 143 VIQGSASEATLVALLAARTKVIRRLQAASPELTQAAIMEKLVAYASDQAHSSVERAGLIG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            V+M+ I SD   ++R   L EA+ERDK   LIPFFV  TLGTT  C+FD+L E+GPIC 
Sbjct: 203 GVRMKLIPSDSNFAMRASALREALERDKAAGLIPFFVVATLGTTNCCSFDSLLEVGPICN 262

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +E +WLH+DAAYAGS+FICPEFR  L GVE+A+S  FNP KWL+V+FDC+AMW
Sbjct: 263 QEEMWLHIDAAYAGSAFICPEFRHLLDGVEFADSFNFNPHKWLLVNFDCSAMW 315

Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.

Cavia porcellus (taxid: 10141)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

>sp|P14173|DDC_RAT Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus GN=Ddc PE=1 SV=1

 Score =  231 bits (589), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 109/173 (63%), Positives = 133/173 (76%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q +ASE+TL+ LLA RT+ IR+ Q + PEL  A +  +LVAY SDQAHSSVE+AGLIG
Sbjct: 143 VIQGSASEATLVALLAARTKMIRQLQAASPELTQAALMEKLVAYTSDQAHSSVERAGLIG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK++ I SD   S+R   L EA+ERDK   LIPFFV  TLGTT  C+FDNL E+GPIC 
Sbjct: 203 GVKIKAIPSDGNYSMRAAALREALERDKAAGLIPFFVVVTLGTTSCCSFDNLLEVGPICN 262

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +EG+WLH+DAAYAGS+FICPEFR  L GVE+A+S  FNP KWL+V+FDC+AMW
Sbjct: 263 QEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315

Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

>sp|P20711|DDC_HUMAN Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1 SV=2

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 108/173 (62%), Positives = 131/173 (75%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q +ASE+TL+ LLA RT+ I + Q + PEL  A I  +LVAY SDQAHSSVE+AGLIG
Sbjct: 143 VIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEKLVAYSSDQAHSSVERAGLIG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK++ I SD   ++R   L EA+ERDK   LIPFF+  TLGTT  C+FDNL E+GPIC 
Sbjct: 203 GVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFMVATLGTTTCCSFDNLLEVGPICN 262

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           KE +WLHVDAAYAGS+FICPEFR  L GVE+A+S  FNP KWL+V+FDC+AMW
Sbjct: 263 KEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315

Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
345482964	720	PREDICTED: histidine decarboxylase-like	0.461	0.240	0.763	4e-79
328697170	639	PREDICTED: histidine decarboxylase-like	0.461	0.270	0.768	2e-77
66500257	718	PREDICTED: histidine decarboxylase [Apis	0.458	0.239	0.767	3e-77
380028727	774	PREDICTED: histidine decarboxylase-like	0.461	0.223	0.763	3e-77
307212734	731	Histidine decarboxylase [Harpegnathos sa	0.461	0.236	0.757	1e-76
307183680	649	Histidine decarboxylase [Camponotus flor	0.461	0.266	0.757	2e-76
340709670	724	PREDICTED: histidine decarboxylase-like	0.458	0.237	0.761	3e-76
350419466	718	PREDICTED: histidine decarboxylase-like	0.461	0.240	0.757	4e-76
350419469	721	PREDICTED: histidine decarboxylase-like	0.458	0.238	0.761	4e-76
269316843	502	putative glutamate decarboxylase [Eumene	0.44	0.328	0.768	7e-76

>gi|345482964|ref|XP_001603214.2| PREDICTED: histidine decarboxylase-like [Nasonia vitripennis]

 Score =  301 bits (771), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 132/173 (76%), Positives = 156/173 (90%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             QTTASESTL+CLLA RT AIR  Q++ P+L  AEINSRLVAYCSDQAHSSVEKAGLIG
Sbjct: 143 VIQTTASESTLVCLLAARTRAIRDVQENDPDLLPAEINSRLVAYCSDQAHSSVEKAGLIG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LV+MRYI+SDD LS+RG+KL EA++RD+++ L+PFFVC TLGTTGAC+FDN++E+GPICE
Sbjct: 203 LVRMRYIDSDDNLSMRGEKLAEALQRDREEGLVPFFVCATLGTTGACSFDNVQEIGPICE 262

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           + GLWLHVDAAYAGS+F+CPEFR W+ G+EYA+S AFNPSKWLMVHFDCTAMW
Sbjct: 263 RNGLWLHVDAAYAGSAFVCPEFRSWMKGIEYADSFAFNPSKWLMVHFDCTAMW 315

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328697170|ref|XP_001948276.2| PREDICTED: histidine decarboxylase-like [Acyrthosiphon pisum]

 Score =  295 bits (756), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 133/173 (76%), Positives = 153/173 (88%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             QTT+SE+T +CLLA RT+AIR+ Q+ +PELE  EINSRLVAYCSDQAHSSVEKAGLIG
Sbjct: 144 VIQTTSSEATFVCLLAARTQAIRRIQEINPELEDVEINSRLVAYCSDQAHSSVEKAGLIG 203

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LVKMR+IESDD LSLRG +++EAI  DKK++LIPFF+C TLGTTGACAFD LEELGPIC 
Sbjct: 204 LVKMRFIESDDSLSLRGAQVMEAIATDKKQNLIPFFLCATLGTTGACAFDKLEELGPICH 263

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
            E +W HVDAAYAG++FICPEFR WL+GV YA+SIAFNPSKW+MVHFDCTAMW
Sbjct: 264 AEDMWFHVDAAYAGTAFICPEFRHWLSGVAYADSIAFNPSKWMMVHFDCTAMW 316

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66500257|ref|XP_392129.2| PREDICTED: histidine decarboxylase [Apis mellifera]

 Score =  295 bits (754), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 132/172 (76%), Positives = 153/172 (88%)

Query: 204 FQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL 263
            QTTASE+TL+CLLA RT AIR  QQ+ P+   AEINSRLVAYCSDQAHSSVEKAGLIGL
Sbjct: 145 IQTTASEATLVCLLAARTRAIRDVQQNEPDRLPAEINSRLVAYCSDQAHSSVEKAGLIGL 204

Query: 264 VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323
           V+M+YIESDD+LS+RG+ L+EAI +D+   L+PFFVC TLGTTGACAFDNL+E+G +CE+
Sbjct: 205 VRMKYIESDDELSMRGETLLEAITQDRADGLLPFFVCATLGTTGACAFDNLKEVGQVCEQ 264

Query: 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
            GLWLHVDAAYAGS+F+CPEFR WL G+EYA+SIAFNPSKWLMVHFDCTAMW
Sbjct: 265 NGLWLHVDAAYAGSAFVCPEFRGWLKGIEYADSIAFNPSKWLMVHFDCTAMW 316

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028727|ref|XP_003698041.1| PREDICTED: histidine decarboxylase-like [Apis florea]

 Score =  295 bits (754), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 132/173 (76%), Positives = 153/173 (88%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             QTTASE+TL+CLLA RT AIR  QQ+ P+   AEINSRLVAYCSDQAHSSVEKAGLIG
Sbjct: 144 VIQTTASEATLVCLLAARTRAIRDVQQNEPDRLPAEINSRLVAYCSDQAHSSVEKAGLIG 203

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LV+M+YIESDD+LS+RG+ L+EAI +D+   L+PFFVC TLGTTGACAFDNL+E+G +CE
Sbjct: 204 LVRMKYIESDDELSMRGETLLEAITQDRADGLLPFFVCATLGTTGACAFDNLKEVGQVCE 263

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           + GLWLHVDAAYAGS+F+CPEFR WL G+EYA+SIAFNPSKWLMVHFDCTAMW
Sbjct: 264 QNGLWLHVDAAYAGSAFVCPEFRGWLKGIEYADSIAFNPSKWLMVHFDCTAMW 316

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212734|gb|EFN88410.1| Histidine decarboxylase [Harpegnathos saltator]

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 131/173 (75%), Positives = 151/173 (87%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             QTTASE+TL+CLLA RT AIR  Q++ PE    EINSRLVAYCSDQAHSSVEKAGLIG
Sbjct: 144 VIQTTASEATLVCLLAARTRAIRDVQENDPERMATEINSRLVAYCSDQAHSSVEKAGLIG 203

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LV+MRYIESDD LS+RG+ L+EA+ RD+ + L+PFFVC TLGTTGAC+FDNL+E+ PIC+
Sbjct: 204 LVRMRYIESDDDLSMRGEALLEALTRDRAEGLLPFFVCATLGTTGACSFDNLKEIAPICQ 263

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           K GLWLH+DAAYAGS+F+CPEFR WL GVE A+SIAFNPSKWLMVHFDCTAMW
Sbjct: 264 KNGLWLHIDAAYAGSAFVCPEFRGWLQGVELADSIAFNPSKWLMVHFDCTAMW 316

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307183680|gb|EFN70383.1| Histidine decarboxylase [Camponotus floridanus]

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 131/173 (75%), Positives = 152/173 (87%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             QTTASE+TL+CLLA RT AIR  Q++ P+L   EINSRLVAYCSDQAHSSVEKAGLIG
Sbjct: 143 VIQTTASEATLVCLLAARTRAIRDVQENEPDLLTTEINSRLVAYCSDQAHSSVEKAGLIG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LV+MRYIESD + S+RGD LIEA++RD+ + L+PFFVC TLGTTGAC+FDNL+E+GPIC+
Sbjct: 203 LVRMRYIESDSEFSMRGDALIEALKRDQAEGLLPFFVCATLGTTGACSFDNLKEIGPICQ 262

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           + GLWLHVDAAYAGS+F+CPEFR WL GVE  +SIAFNPSKWLMVHFDCTAMW
Sbjct: 263 QNGLWLHVDAAYAGSAFVCPEFRGWLQGVELTDSIAFNPSKWLMVHFDCTAMW 315

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709670|ref|XP_003393425.1| PREDICTED: histidine decarboxylase-like [Bombus terrestris]

 Score =  291 bits (745), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 131/172 (76%), Positives = 152/172 (88%)

Query: 204 FQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL 263
            QTTASE+TL+CLLA RT AIR  QQ+ P+   AEINSRLVAYCSDQAHSSVEKAGLIGL
Sbjct: 145 IQTTASEATLVCLLAARTRAIRDVQQNEPDRLPAEINSRLVAYCSDQAHSSVEKAGLIGL 204

Query: 264 VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323
           V+M+YIESD++LS+RG+ L+EAI  D+   L+PFFVC TLGTTGACAFDNL+E+G +CE+
Sbjct: 205 VRMKYIESDNELSMRGEALLEAITHDRAAGLLPFFVCATLGTTGACAFDNLKEVGLVCEQ 264

Query: 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
            GLWLHVDAAYAGS+F+CPEFR WL G+EYA+SIAFNPSKWLMVHFDCTAMW
Sbjct: 265 NGLWLHVDAAYAGSAFVCPEFRGWLQGIEYADSIAFNPSKWLMVHFDCTAMW 316

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419466|ref|XP_003492191.1| PREDICTED: histidine decarboxylase-like isoform 1 [Bombus impatiens]

 Score =  291 bits (744), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 131/173 (75%), Positives = 152/173 (87%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             QTTASE+TL+CLLA RT AIR  QQ+ P+   AEINSRLVAYCSDQAHSSVEKAGLIG
Sbjct: 144 VIQTTASEATLVCLLAARTRAIRDVQQNEPDRLPAEINSRLVAYCSDQAHSSVEKAGLIG 203

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LV+M+YIESD++LS+RG+ L+EAI  D+   L+PFFVC TLGTTGACAFDNL+E+G +CE
Sbjct: 204 LVRMKYIESDNELSMRGEALLEAITHDRAAGLLPFFVCATLGTTGACAFDNLKEVGLVCE 263

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           + GLWLHVDAAYAGS+F+CPEFR WL G+EYA+SIAFNPSKWLMVHFDCTAMW
Sbjct: 264 QNGLWLHVDAAYAGSAFVCPEFRGWLQGIEYADSIAFNPSKWLMVHFDCTAMW 316

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419469|ref|XP_003492192.1| PREDICTED: histidine decarboxylase-like isoform 2 [Bombus impatiens]

 Score =  291 bits (744), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 131/172 (76%), Positives = 152/172 (88%)

Query: 204 FQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL 263
            QTTASE+TL+CLLA RT AIR  QQ+ P+   AEINSRLVAYCSDQAHSSVEKAGLIGL
Sbjct: 145 IQTTASEATLVCLLAARTRAIRDVQQNEPDRLPAEINSRLVAYCSDQAHSSVEKAGLIGL 204

Query: 264 VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK 323
           V+M+YIESD++LS+RG+ L+EAI  D+   L+PFFVC TLGTTGACAFDNL+E+G +CE+
Sbjct: 205 VRMKYIESDNELSMRGEALLEAITHDRAAGLLPFFVCATLGTTGACAFDNLKEVGLVCEQ 264

Query: 324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
            GLWLHVDAAYAGS+F+CPEFR WL G+EYA+SIAFNPSKWLMVHFDCTAMW
Sbjct: 265 NGLWLHVDAAYAGSAFVCPEFRGWLQGIEYADSIAFNPSKWLMVHFDCTAMW 316

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|269316843|gb|ACZ37404.1| putative glutamate decarboxylase [Eumenes pomiformis]

 Score =  290 bits (742), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 133/173 (76%), Positives = 149/173 (86%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             QTTASE+TLI LLA RT AIR  Q+S P+   AEINSRLVAYCSDQAHSSVEKAGLIG
Sbjct: 144 VIQTTASEATLISLLAARTRAIRDVQESEPDQTAAEINSRLVAYCSDQAHSSVEKAGLIG 203

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LVKMRY+ESD  LS+RG+ L EA+ RD+   L+PFFVC TLGTTGAC+FDNL+E+GPICE
Sbjct: 204 LVKMRYVESDADLSMRGEALEEALARDRADGLLPFFVCATLGTTGACSFDNLKEIGPICE 263

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           + GLWLH+DAAYAGS+F+CPEFR WL GVEYANS AFNPSKWLMVHFDCTAMW
Sbjct: 264 RNGLWLHIDAAYAGSAFVCPEFRGWLQGVEYANSFAFNPSKWLMVHFDCTAMW 316

Source: Eumenes pomiformis

Species: Eumenes pomiformis

Genus: Eumenes

Family: Vespidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
FB|FBgn0005619	847	Hdc "Histidine decarboxylase"	0.456	0.201	0.725	2.1e-86
UNIPROTKB|F1NXM1	483	HDC "Uncharacterized protein"	0.456	0.354	0.643	2.2e-78
UNIPROTKB|B7ZM01	629	HDC "HDC protein" [Homo sapien	0.456	0.271	0.649	7.5e-78
UNIPROTKB|P19113	662	HDC "Histidine decarboxylase"	0.456	0.258	0.649	7.5e-78
UNIPROTKB|Q5EA83	658	HDC "Histidine decarboxylase"	0.456	0.259	0.637	3.2e-77
UNIPROTKB|E2RMU1	663	HDC "Uncharacterized protein"	0.456	0.257	0.637	3.2e-77
UNIPROTKB|F1SQH5	662	HDC "Uncharacterized protein"	0.456	0.258	0.637	8.5e-77
MGI|MGI:96062	662	Hdc "histidine decarboxylase"	0.456	0.258	0.643	1.4e-76
RGD|2790	656	Hdc "histidine decarboxylase"	0.456	0.260	0.631	2.5e-75
ZFIN|ZDB-GENE-080102-5	608	hdc "histidine decarboxylase"	0.456	0.281	0.589	2.9e-74

FB|FBgn0005619 Hdc "Histidine decarboxylase" [Drosophila melanogaster (taxid:7227)]

 Score = 681 (244.8 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
 Identities = 124/171 (72%), Positives = 148/171 (86%)

Query:   205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
             QTTASE+TL+CLLAGRT AI+++ + HP  + AEIN+RLVAYCSDQAHSSVEKA LIGLV
Sbjct:   146 QTTASEATLVCLLAGRTRAIQRFHERHPGYQDAEINARLVAYCSDQAHSSVEKAALIGLV 205

Query:   265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324
             +MRYIE+DD L++RG  L EAIE D K+ L+PF+VC TLGTTG+C+FDNLEE+G +C + 
Sbjct:   206 RMRYIEADDDLAMRGKLLREAIEDDIKQGLVPFWVCATLGTTGSCSFDNLEEIGIVCAEH 265

Query:   325 GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
              LWLHVDAAYAGS+FICPEFR WL G+E A+SIAFNPSKWLMVHFD TA+W
Sbjct:   266 HLWLHVDAAYAGSAFICPEFRTWLRGIERADSIAFNPSKWLMVHFDATALW 316

GO:0004398 "histidine decarboxylase activity" evidence=ISS;NAS;IMP

GO:0042051 "compound eye photoreceptor development" evidence=NAS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0043052 "thermotaxis" evidence=IMP

UNIPROTKB|F1NXM1 HDC "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 614 (221.2 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
 Identities = 110/171 (64%), Positives = 136/171 (79%)

Query:   205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
             Q+T SESTL+ LLA R   I + + S P+ + + +NSRL+AY SDQAHSSVEKAGLI LV
Sbjct:   152 QSTVSESTLVALLAARKNKILEMKLSEPDADESSLNSRLIAYASDQAHSSVEKAGLISLV 211

Query:   265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324
             KM+++  D+  SLRG+ L +AI  D+KK L+P FVC TLGTTG CAFD+L ELGPIC  E
Sbjct:   212 KMKFLPVDENFSLRGETLKKAIAEDRKKGLVPIFVCATLGTTGVCAFDSLSELGPICGAE 271

Query:   325 GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             GLWLH+DAAYAG++F+CPEFR +L G+EYA+S AFNPSKW+MVHFDCT  W
Sbjct:   272 GLWLHIDAAYAGTAFLCPEFRLFLDGIEYADSFAFNPSKWMMVHFDCTGFW 322

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0004398 "histidine decarboxylase activity" evidence=IEA

GO:0006548 "histidine catabolic process" evidence=IEA

UNIPROTKB|B7ZM01 HDC "HDC protein" [Homo sapiens (taxid:9606)]

 Score = 612 (220.5 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
 Identities = 111/171 (64%), Positives = 136/171 (79%)

Query:   205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
             Q+T SESTLI LLA R   I + + S P+ + + +N+RLVAY SDQAHSSVEKAGLI LV
Sbjct:   147 QSTVSESTLIALLAARKNKILEMKTSEPDADESCLNARLVAYASDQAHSSVEKAGLISLV 206

Query:   265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324
             KM+++  DD  SLRG+ L +AIE DK++ L+P FVC TLGTTG CAFD L ELGPIC +E
Sbjct:   207 KMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICARE 266

Query:   325 GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             GLWLH+DAAYAG++F+CPEFR +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct:   267 GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 317

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|P19113 HDC "Histidine decarboxylase" [Homo sapiens (taxid:9606)]

 Score = 612 (220.5 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
 Identities = 111/171 (64%), Positives = 136/171 (79%)

Query:   205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
             Q+T SESTLI LLA R   I + + S P+ + + +N+RLVAY SDQAHSSVEKAGLI LV
Sbjct:   147 QSTVSESTLIALLAARKNKILEMKTSEPDADESCLNARLVAYASDQAHSSVEKAGLISLV 206

Query:   265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324
             KM+++  DD  SLRG+ L +AIE DK++ L+P FVC TLGTTG CAFD L ELGPIC +E
Sbjct:   207 KMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICARE 266

Query:   325 GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             GLWLH+DAAYAG++F+CPEFR +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct:   267 GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 317

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042423 "catecholamine biosynthetic process" evidence=IEA

GO:0001694 "histamine biosynthetic process" evidence=IEA;IDA

GO:0006548 "histidine catabolic process" evidence=IDA;TAS

GO:0004398 "histidine decarboxylase activity" evidence=IDA;TAS

GO:0006547 "histidine metabolic process" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|Q5EA83 HDC "Histidine decarboxylase" [Bos taurus (taxid:9913)]

 Score = 606 (218.4 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
 Identities = 109/171 (63%), Positives = 136/171 (79%)

Query:   205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
             Q+T SESTLI LLA R   I + + S PE + + +N+RLVAY SDQAHSSVEKAGLI LV
Sbjct:   147 QSTVSESTLIALLAARKNKILEMKASEPEADESFLNARLVAYASDQAHSSVEKAGLISLV 206

Query:   265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324
             KM+++  D+  SLRG+ L +AI+ D+++ L+P FVC TLGTTG CAFD L ELGPIC +E
Sbjct:   207 KMKFLPVDENFSLRGEALQKAIKEDRERGLVPIFVCATLGTTGVCAFDCLSELGPICARE 266

Query:   325 GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             GLWLH+DAAYAG++F+CPEFR +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct:   267 GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 317

GO:0004398 "histidine decarboxylase activity" evidence=ISS

GO:0006548 "histidine catabolic process" evidence=ISS

GO:0001694 "histamine biosynthetic process" evidence=IEA;ISS

GO:0042423 "catecholamine biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|E2RMU1 HDC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 606 (218.4 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
 Identities = 109/171 (63%), Positives = 135/171 (78%)

Query:   205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
             Q+T SESTLI LLA R + I + + S P  + + +N+RL+AY SDQAHSSVEKAGLI LV
Sbjct:   147 QSTVSESTLIALLAARKDKILELKASEPGADESSLNARLIAYASDQAHSSVEKAGLISLV 206

Query:   265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324
             KM+++  DD  SLRG+ L +AI+ DK++ L+P FVC TLGTTG CAFD L ELGPIC  E
Sbjct:   207 KMKFLPVDDNFSLRGEALQKAIKEDKEQGLVPVFVCATLGTTGVCAFDCLSELGPICASE 266

Query:   325 GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             GLWLH+DAAYAG++F+CPEFR +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct:   267 GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 317

GO:0006548 "histidine catabolic process" evidence=IEA

GO:0004398 "histidine decarboxylase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|F1SQH5 HDC "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 602 (217.0 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
 Identities = 109/171 (63%), Positives = 134/171 (78%)

Query:   205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
             Q+T SESTLI LLA R   I + + S P  + + +N+RL+AY SDQAHSSVEKAGLI LV
Sbjct:   147 QSTVSESTLIALLAARKNKILEMKASEPGADESCLNARLIAYASDQAHSSVEKAGLISLV 206

Query:   265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324
             KM+++  DD  SLRG+ L +AIE D+++ L+P FVC TLGTTG CAFD L ELGPIC  E
Sbjct:   207 KMKFLPVDDNFSLRGEALQKAIEEDRERGLVPVFVCATLGTTGVCAFDCLSELGPICASE 266

Query:   325 GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             GLWLH+DAAYAG++F+CPEFR +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct:   267 GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 317

GO:0006548 "histidine catabolic process" evidence=IEA

GO:0004398 "histidine decarboxylase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

MGI|MGI:96062 Hdc "histidine decarboxylase" [Mus musculus (taxid:10090)]

 Score = 600 (216.3 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
 Identities = 110/171 (64%), Positives = 131/171 (76%)

Query:   205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
             Q+T SESTLI LLA R   I   +   P+   + +N+RLVAY SDQAHSSVEKAGLI LV
Sbjct:   154 QSTVSESTLIALLAARKNKILAMKACEPDANESSLNARLVAYTSDQAHSSVEKAGLISLV 213

Query:   265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324
             K+R++  DD  SLRG+ L +AIE DK++ L+P FVC TLGTTG CAFD L ELGPIC  E
Sbjct:   214 KIRFLPVDDNFSLRGEALQKAIEEDKQQGLVPVFVCATLGTTGVCAFDRLSELGPICASE 273

Query:   325 GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             GLWLHVDAAYAG++F+CPE R +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct:   274 GLWLHVDAAYAGTAFLCPELRGFLEGIEYADSFTFNPSKWMMVHFDCTGFW 324

GO:0001692 "histamine metabolic process" evidence=ISO

GO:0001694 "histamine biosynthetic process" evidence=ISO;IMP

GO:0003824 "catalytic activity" evidence=IEA

GO:0004398 "histidine decarboxylase activity" evidence=ISO;IMP;TAS

GO:0005829 "cytosol" evidence=ISO

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0006547 "histidine metabolic process" evidence=ISO

GO:0006548 "histidine catabolic process" evidence=ISO;IMP;TAS

GO:0016597 "amino acid binding" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=ISO

GO:0030425 "dendrite" evidence=ISO

GO:0042423 "catecholamine biosynthetic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=ISO

RGD|2790 Hdc "histidine decarboxylase" [Rattus norvegicus (taxid:10116)]

 Score = 588 (212.0 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
 Identities = 108/171 (63%), Positives = 131/171 (76%)

Query:   205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
             Q T SESTLI LLA R   I + +   P  + + +N+RLVAY SDQAHSSVEKAGLI LV
Sbjct:   150 QRTVSESTLIALLAARKNKILEMKAHEPNADESSLNARLVAYASDQAHSSVEKAGLISLV 209

Query:   265 KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE 324
             K++++  DD  SLRG+ L +AIE DK++ L+P FVC TLGTTG CAFD L ELGPIC +E
Sbjct:   210 KIKFLPVDDNFSLRGEALQKAIEEDKQQGLVPVFVCATLGTTGVCAFDKLSELGPICARE 269

Query:   325 GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             GLWLHVDAAYAG++F+ PE R +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct:   270 GLWLHVDAAYAGTAFLRPELRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 320

GO:0001692 "histamine metabolic process" evidence=IDA

GO:0001694 "histamine biosynthetic process" evidence=IEA;ISO

GO:0004398 "histidine decarboxylase activity" evidence=ISO;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0006547 "histidine metabolic process" evidence=IDA

GO:0006548 "histidine catabolic process" evidence=ISO

GO:0016597 "amino acid binding" evidence=IDA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA;IDA

GO:0030425 "dendrite" evidence=IDA

GO:0042423 "catecholamine biosynthetic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=RCA

GO:0043025 "neuronal cell body" evidence=IDA

ZFIN|ZDB-GENE-080102-5 hdc "histidine decarboxylase" [Danio rerio (taxid:7955)]

 Score = 569 (205.4 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
 Identities = 102/173 (58%), Positives = 134/173 (77%)

Query:   205 QTTASESTLICLLAGRTEAI--RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q+T SE TL+ LLA R + I   K + +H + + + +NSRLVAY SDQAHSSVEKAGLI 
Sbjct:   146 QSTVSECTLVALLAARKDRILQMKSEATHTDTDESVLNSRLVAYASDQAHSSVEKAGLIS 205

Query:   263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
             LVK+R++++D   SLRG+ L  A+E D++  LIP  VC TLG+TG C+FD L+ELGP+C 
Sbjct:   206 LVKIRFLQTDAVFSLRGETLQRAVEEDRRSGLIPVMVCATLGSTGVCSFDRLDELGPVCV 265

Query:   323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
             +EGLWLHVDAAYAGS+ +CPE R +L G+++A+S  FNPSKW++VHFDCTA W
Sbjct:   266 REGLWLHVDAAYAGSALLCPELRYFLDGIQFADSFVFNPSKWMLVHFDCTAFW 318

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q05733	DCHS_DROME	4, ., 1, ., 1, ., 2, 2	0.7209	0.4586	0.2030	yes	N/A
P23738	DCHS_MOUSE	4, ., 1, ., 1, ., 2, 2	0.6358	0.4613	0.2613	yes	N/A
P16453	DCHS_RAT	4, ., 1, ., 1, ., 2, 2	0.6242	0.4613	0.2637	yes	N/A
P19113	DCHS_HUMAN	4, ., 1, ., 1, ., 2, 2	0.6416	0.4613	0.2613	yes	N/A
Q5EA83	DCHS_BOVIN	4, ., 1, ., 1, ., 2, 2	0.6300	0.4613	0.2629	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.1.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	375
pfam00282	373	pfam00282, Pyridoxal_deC, Pyridoxal-dependent deca	1e-84
cd06450	345	cd06450, DOPA_deC_like, DOPA decarboxylase family	1e-67
PLN02880	490	PLN02880, PLN02880, tyrosine decarboxylase	3e-44
PLN02590	539	PLN02590, PLN02590, probable tyrosine decarboxylas	3e-36
COG0076	460	COG0076, GadB, Glutamate decarboxylase and related	3e-29
pfam00282	373	pfam00282, Pyridoxal_deC, Pyridoxal-dependent deca	1e-15
TIGR03799	522	TIGR03799, NOD_PanD_pyr, putative pyridoxal-depend	3e-12
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	4e-11
PRK13520	371	PRK13520, PRK13520, L-tyrosine decarboxylase; Prov	7e-09
TIGR03812	373	TIGR03812, tyr_de_CO2_Arch, tyrosine decarboxylase	1e-08
PLN02880	490	PLN02880, PLN02880, tyrosine decarboxylase	2e-08
PRK02769	380	PRK02769, PRK02769, histidine decarboxylase; Provi	1e-07
PLN02590	539	PLN02590, PLN02590, probable tyrosine decarboxylas	7e-06
cd06450	345	cd06450, DOPA_deC_like, DOPA decarboxylase family	9e-05

>gnl|CDD|215836 pfam00282, Pyridoxal_deC, Pyridoxal-dependent decarboxylase conserved domain

 Score =  261 bits (669), Expect = 1e-84
 Identities = 98/173 (56%), Positives = 123/173 (71%), Gaps = 5/173 (2%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q  +SES L+ LLA RT+ IR+ + +           +LVAY SDQAHSS+EKA LI 
Sbjct: 107 VLQGGSSESNLLALLAARTKWIRRMKAAGKPS-----LGKLVAYTSDQAHSSIEKAALIA 161

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            V++R I +D+   +RG  L +AIE DK+  LIPFFVC TLGTTG+ AFD L+ELG IC 
Sbjct: 162 GVELREIPTDENGKMRGMDLEKAIEEDKENGLIPFFVCATLGTTGSGAFDPLQELGDICN 221

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           K  LWLHVDAAYAGS+FICPEFR WL G+E A+S +FNP KW++V  DC+A+W
Sbjct: 222 KYDLWLHVDAAYAGSAFICPEFRHWLFGIERADSFSFNPHKWMLVLLDCSALW 274

Length = 373

>gnl|CDD|99743 cd06450, DOPA_deC_like, DOPA decarboxylase family

 Score =  216 bits (553), Expect = 1e-67
 Identities = 68/173 (39%), Positives = 91/173 (52%), Gaps = 5/173 (2%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
            F +  SES L+ LLA R  A ++ +             +LV  CSDQAH SVEKA    
Sbjct: 61  VFTSGGSESNLLALLAARDRARKRLKAGGGR-----GIDKLVIVCSDQAHVSVEKAAAYL 115

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK+R +  D+   +  + L  AI+ DK + L P  V  T GTT   A D LEE+  + E
Sbjct: 116 DVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAE 175

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           K  LWLHVDAAY G     PE R    G+E  +SI+ +P K+ +V   C+A+ 
Sbjct: 176 KYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVL 228

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine. Length = 345

>gnl|CDD|215475 PLN02880, PLN02880, tyrosine decarboxylase

 Score =  159 bits (403), Expect = 3e-44
 Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 13/176 (7%)

Query: 205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG-- 262
           Q TASE+ L+ LLA R   +RK  ++  E        +LV Y SDQ HS+++KA  I   
Sbjct: 152 QGTASEAVLVVLLAARDRVLRKVGKNALE--------KLVVYASDQTHSALQKACQIAGI 203

Query: 263 ---LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319
                ++   +S    +L  + L EAI  D    LIPFF+C T+GTT + A D L ELG 
Sbjct: 204 HPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGK 263

Query: 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           I +  G+W HVDAAYAGS+ ICPE+R ++ GVE A+S   N  KW + +FDC+ +W
Sbjct: 264 IAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLW 319

Length = 490

>gnl|CDD|178200 PLN02590, PLN02590, probable tyrosine decarboxylase

 Score =  137 bits (347), Expect = 3e-36
 Identities = 73/176 (41%), Positives = 105/176 (59%), Gaps = 13/176 (7%)

Query: 205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV 264
           Q T  E+ L+ +LA R   ++K  ++        +  +LV Y SDQ HSS  KA LIG +
Sbjct: 200 QGTGCEAVLVVVLAARDRILKKVGKT--------LLPQLVVYGSDQTHSSFRKACLIGGI 251

Query: 265 ---KMRYIESDDKLS--LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319
               +R +++D   +  +  + L EAI  D  K  IPFF+C T+GTT + A D L  LG 
Sbjct: 252 HEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGN 311

Query: 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           I +K G+WLHVDAAYAG++ ICPE+RK++ G+E A+S   N  KWL  +  C+ +W
Sbjct: 312 IAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLW 367

Length = 539

>gnl|CDD|223154 COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

 Score =  117 bits (295), Expect = 3e-29
 Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 11/171 (6%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
           TF +  +E+ L+ LLA R E  RK   +       + N      CS+ AH S EKA    
Sbjct: 123 TFTSGGTEANLLALLAAR-ERWRKRALAESGKPGGKPN----IVCSETAHFSFEKAARYL 177

Query: 263 LVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321
            + +R + +      +  D L EAI+ +     I   V GT GTT   + D++EEL  I 
Sbjct: 178 GLGLRRVPTVPTDYRIDVDALEEAIDENT----IGGVVVGTAGTTDTGSIDDIEELADIA 233

Query: 322 EKEGLWLHVDAAYAGSSFICPEFR-KWLAGVEYANSIAFNPSKWLMVHFDC 371
           E+ G+WLHVDAA+ G      E   +W  G+E  +SI  +  K+ +    C
Sbjct: 234 EEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGC 284

Length = 460

>gnl|CDD|215836 pfam00282, Pyridoxal_deC, Pyridoxal-dependent decarboxylase conserved domain

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 31/39 (79%), Positives = 32/39 (82%)

Query: 38 ITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWV 76
          +T W SP  HAYFPA NSYPSLLGDMLSDAINC GFTW 
Sbjct: 34 VTTWHSPNFHAYFPAGNSYPSLLGDMLSDAINCNGFTWE 72

Length = 373

>gnl|CDD|163511 TIGR03799, NOD_PanD_pyr, putative pyridoxal-dependent aspartate 1-decarboxylase

 Score = 67.4 bits (165), Expect = 3e-12
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 9/126 (7%)

Query: 248 SDQAHSSVEKA------GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCG 301
           S++ H S+ KA      G   L+    I++D    +  D L +      ++++ P  + G
Sbjct: 215 SERGHYSLGKAADVLGIGRDNLIA---IKTDANNRIDVDALRDKCAELAEQNIKPLAIVG 271

Query: 302 TLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNP 361
             GTT     D L+E+  I ++ G   HVDAA+ G++ +   +R  L G+E A+S+  + 
Sbjct: 272 VAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDA 331

Query: 362 SKWLMV 367
            K L V
Sbjct: 332 HKQLYV 337

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent) [Biosynthesis of cofactors, prosthetic groups, and carriers, Pantothenate and coenzyme A]. Length = 522

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 31/136 (22%), Positives = 45/136 (33%), Gaps = 10/136 (7%)

Query: 242 RLVAYCSDQAHSSVE--KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFV 299
                     H S     A L G  K   +  DD     G  +    E   K +     +
Sbjct: 41  GDEVIVDANGHGSRYWVAAELAG-AKPVPVPVDDA-GYGGLDVAILEELKAKPN--VALI 96

Query: 300 CGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF 359
             T  TT       L+E+  I ++ G+ L VDAA AG +   P     L     A+ + F
Sbjct: 97  VITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGV---LIPEGGADVVTF 153

Query: 360 NPSKWLMVHFDCTAMW 375
           +  K L        + 
Sbjct: 154 SLHKNLGG-EGGGVVI 168

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|237409 PRK13520, PRK13520, L-tyrosine decarboxylase; Provisional

 Score = 56.4 bits (137), Expect = 7e-09
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 21/121 (17%)

Query: 251 AHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA 310
           AH S +KA  +  V++R    DD   +    + + I+     + I   + G  GTT    
Sbjct: 113 AHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID----DNTIG--IVGIAGTTELGQ 166

Query: 311 FDNLEELGPICEKEGLWLHVDAAYAGSSFICP--------EFRKWLAGVEYANSIAFNPS 362
            D + EL  I  + G++LHVDAA+ G  F+ P        +F   L GV   +SI  +P 
Sbjct: 167 VDPIPELSKIALENGIFLHVDAAFGG--FVIPFLDDPPNFDFS--LPGV---DSITIDPH 219

Query: 363 K 363
           K
Sbjct: 220 K 220

Length = 371

>gnl|CDD|234361 TIGR03812, tyr_de_CO2_Arch, tyrosine decarboxylase MnfA

 Score = 55.8 bits (135), Expect = 1e-08
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 20/124 (16%)

Query: 249 DQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA 308
           + AH S EKA  +  +++RY   D+  ++    + + I+ D    ++     G  GTT  
Sbjct: 113 ESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLID-DNTIGIV-----GIAGTTEL 166

Query: 309 CAFDNLEELGPICEKEGLWLHVDAAYAGSSFICP------EFRKW---LAGVEYANSIAF 359
              D++EEL  I  + G++LHVDAA+ G  F+ P          +   L GV+   SI  
Sbjct: 167 GQIDDIEELSKIALENGIYLHVDAAFGG--FVIPFLKKGYNPPPFDFSLPGVQ---SITI 221

Query: 360 NPSK 363
           +P K
Sbjct: 222 DPHK 225

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]. Length = 373

>gnl|CDD|215475 PLN02880, PLN02880, tyrosine decarboxylase

 Score = 55.7 bits (134), Expect = 2e-08
 Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 8/74 (10%)

Query: 3   VVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGD 62
           ++P   PNQ ET  Q  D    DV    L      +THWQSP   AY+P+ +S    LG+
Sbjct: 50  LLPDSAPNQPETLDQVLD----DVQAKILPG----VTHWQSPNYFAYYPSNSSVAGFLGE 101

Query: 63  MLSDAINCLGFTWV 76
           MLS  +N +GF+W+
Sbjct: 102 MLSAGLNIVGFSWI 115

Length = 490

>gnl|CDD|235068 PRK02769, PRK02769, histidine decarboxylase; Provisional

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL 303
             Y S   H SV K   +  +K R I S     +  D LI  I+ +K +  I F     +
Sbjct: 112 TLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIF---ANI 168

Query: 304 GTTGACAFDNLEELGPICEKEGL---WLHVDAAYAG 336
           GTT   A DN++E+  I +K G+   ++H DAA +G
Sbjct: 169 GTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSG 204

Length = 380

>gnl|CDD|178200 PLN02590, PLN02590, probable tyrosine decarboxylase

 Score = 47.8 bits (113), Expect = 7e-06
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 8/76 (10%)

Query: 3   VVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGD 62
           ++P   P + E+ K+  D    DV     +     ITHWQSP   AY+ +  S    LG+
Sbjct: 98  MLPDSAPERPESLKELLD----DVS----KKIMPGITHWQSPSYFAYYASSTSVAGFLGE 149

Query: 63  MLSDAINCLGFTWVRT 78
           ML+  ++ +GFTW+ +
Sbjct: 150 MLNAGLSVVGFTWLTS 165

Length = 539

>gnl|CDD|99743 cd06450, DOPA_deC_like, DOPA decarboxylase family

 Score = 43.7 bits (104), Expect = 9e-05
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 46 MHAYFPALNSYPSLLGDMLSDAINCLGFTW 75
            A F      P+LL +ML+ A N + FTW
Sbjct: 1  FLAGFVTTMDPPALLLEMLTSAKNAIDFTW 30

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine. Length = 345

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	375
KOG0628|consensus	511		100.0
PLN02590	539	probable tyrosine decarboxylase	100.0
PLN02880	490	tyrosine decarboxylase	100.0
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	100.0
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	100.0
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	100.0
KOG0629|consensus	510		100.0
PLN02263	470	serine decarboxylase	100.0
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	100.0
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	100.0
PRK02769	380	histidine decarboxylase; Provisional	100.0
PLN03032	374	serine decarboxylase; Provisional	100.0
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	100.0
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.91
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.91
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.9
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.89
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.87
KOG1383|consensus	491		99.85
PLN02651	364	cysteine desulfurase	99.84
PRK05367	954	glycine dehydrogenase; Provisional	99.84
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.83
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.81
KOG1549|consensus	428		99.81
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.8
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.8
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.79
PRK14012	404	cysteine desulfurase; Provisional	99.79
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.79
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.78
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.77
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.76
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.76
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.75
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.75
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.75
PRK02948	381	cysteine desulfurase; Provisional	99.74
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.74
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.74
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.74
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.74
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.74
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.73
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.73
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.73
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.72
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.72
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.69
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.69
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.68
PLN02409	401	serine--glyoxylate aminotransaminase	99.68
PRK12566	954	glycine dehydrogenase; Provisional	99.66
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.66
PLN02721	353	threonine aldolase	99.65
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.65
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.65
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.62
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.6
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.6
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.58
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.58
KOG1368|consensus	384		99.58
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.57
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.57
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.57
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.56
PRK07179	407	hypothetical protein; Provisional	99.56
PLN02724	805	Molybdenum cofactor sulfurase	99.55
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.54
PRK08361	391	aspartate aminotransferase; Provisional	99.53
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.51
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.51
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.5
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.48
PRK15029	755	arginine decarboxylase; Provisional	99.48
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.47
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.47
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.45
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.45
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.45
PRK06108	382	aspartate aminotransferase; Provisional	99.45
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.44
PRK09082	386	methionine aminotransferase; Validated	99.43
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.42
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.41
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.41
PRK08912	387	hypothetical protein; Provisional	99.4
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.4
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.39
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.39
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.39
PRK03080	378	phosphoserine aminotransferase; Provisional	99.39
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.39
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.39
PRK10534	333	L-threonine aldolase; Provisional	99.39
PRK05764	393	aspartate aminotransferase; Provisional	99.39
PRK05957	389	aspartate aminotransferase; Provisional	99.39
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.38
PRK06207	405	aspartate aminotransferase; Provisional	99.38
PRK12414	384	putative aminotransferase; Provisional	99.38
PRK07777	387	aminotransferase; Validated	99.38
PLN02368	407	alanine transaminase	99.38
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.37
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.37
PRK06225	380	aspartate aminotransferase; Provisional	99.36
PLN02656	409	tyrosine transaminase	99.36
PTZ00377	481	alanine aminotransferase; Provisional	99.36
PRK13237	460	tyrosine phenol-lyase; Provisional	99.36
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.36
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.36
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.35
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.35
PRK08574	385	cystathionine gamma-synthase; Provisional	99.35
PRK13392	410	5-aminolevulinate synthase; Provisional	99.35
PRK07682	378	hypothetical protein; Validated	99.34
PLN00175	413	aminotransferase family protein; Provisional	99.34
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.34
PRK08960	387	hypothetical protein; Provisional	99.34
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.33
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.33
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.33
PRK15400	714	lysine decarboxylase CadA; Provisional	99.33
PRK07337	388	aminotransferase; Validated	99.33
PLN02187	462	rooty/superroot1	99.32
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.32
PRK08861	388	cystathionine gamma-synthase; Provisional	99.32
PLN02955	476	8-amino-7-oxononanoate synthase	99.32
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.32
PRK13578	720	ornithine decarboxylase; Provisional	99.31
PRK07681	399	aspartate aminotransferase; Provisional	99.31
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.31
PLN02483	489	serine palmitoyltransferase	99.31
PRK07811	388	cystathionine gamma-synthase; Provisional	99.31
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.31
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.31
PRK05942	394	aspartate aminotransferase; Provisional	99.31
PRK04311	464	selenocysteine synthase; Provisional	99.31
PRK07050	394	cystathionine beta-lyase; Provisional	99.31
PLN02242	418	methionine gamma-lyase	99.31
PLN02509	464	cystathionine beta-lyase	99.31
PRK07550	386	hypothetical protein; Provisional	99.3
PLN02231	534	alanine transaminase	99.3
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.3
PRK06767	386	methionine gamma-lyase; Provisional	99.3
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.3
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.3
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.3
PRK07503	403	methionine gamma-lyase; Provisional	99.29
PRK08363	398	alanine aminotransferase; Validated	99.29
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.29
PTZ00433	412	tyrosine aminotransferase; Provisional	99.29
PRK08064	390	cystathionine beta-lyase; Provisional	99.29
PRK05939	397	hypothetical protein; Provisional	99.29
PRK08776	405	cystathionine gamma-synthase; Provisional	99.29
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.29
PRK06836	394	aspartate aminotransferase; Provisional	99.29
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.29
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.29
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.29
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.28
PRK08249	398	cystathionine gamma-synthase; Provisional	99.28
PRK06348	384	aspartate aminotransferase; Provisional	99.28
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.28
PRK07324	373	transaminase; Validated	99.28
PRK05968	389	hypothetical protein; Provisional	99.28
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.28
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.28
PRK09064	407	5-aminolevulinate synthase; Validated	99.27
PRK06234	400	methionine gamma-lyase; Provisional	99.27
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.27
PRK08636	403	aspartate aminotransferase; Provisional	99.27
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.26
PLN02822	481	serine palmitoyltransferase	99.26
PRK08045	386	cystathionine gamma-synthase; Provisional	99.26
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.26
PRK09028	394	cystathionine beta-lyase; Provisional	99.26
PRK08114	395	cystathionine beta-lyase; Provisional	99.25
PRK06107	402	aspartate aminotransferase; Provisional	99.25
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.25
PRK08068	389	transaminase; Reviewed	99.24
PLN02271	586	serine hydroxymethyltransferase	99.24
PRK07683	387	aminotransferase A; Validated	99.24
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.24
PRK13393	406	5-aminolevulinate synthase; Provisional	99.23
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.23
KOG0257|consensus	420		99.23
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.22
PRK09265	404	aminotransferase AlaT; Validated	99.22
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.22
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.22
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.21
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.21
PRK06290	410	aspartate aminotransferase; Provisional	99.21
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.21
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.21
PRK07671	377	cystathionine beta-lyase; Provisional	99.21
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.2
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.19
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.19
PRK07568	397	aspartate aminotransferase; Provisional	99.19
PRK09148	405	aminotransferase; Validated	99.18
PRK06855	433	aminotransferase; Validated	99.18
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.17
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.16
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.16
PRK08175	395	aminotransferase; Validated	99.16
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.14
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.14
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.14
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.13
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.13
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.13
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.12
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.12
PRK03321	352	putative aminotransferase; Provisional	99.11
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.11
PRK09105	370	putative aminotransferase; Provisional	99.1
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.09
PRK06460	376	hypothetical protein; Provisional	99.08
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.08
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	99.07
PTZ00376	404	aspartate aminotransferase; Provisional	99.07
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.06
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.05
PRK07582	366	cystathionine gamma-lyase; Validated	99.05
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.04
PRK05367	954	glycine dehydrogenase; Provisional	99.03
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.03
PRK05967	395	cystathionine beta-lyase; Provisional	99.03
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.02
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.02
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.01
KOG0630|consensus	838		98.98
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	98.97
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	98.96
KOG0256|consensus	471		98.96
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	98.96
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	98.95
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.95
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	98.95
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	98.95
PLN02672	1082	methionine S-methyltransferase	98.94
PRK05839	374	hypothetical protein; Provisional	98.94
PRK07908	349	hypothetical protein; Provisional	98.94
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	98.93
PRK08637	388	hypothetical protein; Provisional	98.92
PRK06358	354	threonine-phosphate decarboxylase; Provisional	98.92
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	98.9
PRK09275	527	aspartate aminotransferase; Provisional	98.89
PTZ00125	400	ornithine aminotransferase-like protein; Provision	98.89
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	98.88
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	98.88
PRK06434	384	cystathionine gamma-lyase; Validated	98.88
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	98.87
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	98.86
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	98.86
PRK07505	402	hypothetical protein; Provisional	98.85
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	98.84
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	98.83
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	98.83
PRK08354	311	putative aminotransferase; Provisional	98.81
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	98.81
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	98.8
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	98.79
PLN02397	423	aspartate transaminase	98.79
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	98.79
PLN02414	993	glycine dehydrogenase (decarboxylating)	98.76
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	98.76
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	98.75
PRK01278	389	argD acetylornithine transaminase protein; Provisi	98.73
PRK06425	332	histidinol-phosphate aminotransferase; Validated	98.73
PRK07049	427	methionine gamma-lyase; Validated	98.73
PRK02936	377	argD acetylornithine aminotransferase; Provisional	98.73
PRK02627	396	acetylornithine aminotransferase; Provisional	98.73
KOG0259|consensus	447		98.72
PRK03715	395	argD acetylornithine transaminase protein; Provisi	98.71
KOG2040|consensus	1001		98.71
PRK07392	360	threonine-phosphate decarboxylase; Validated	98.71
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	98.69
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	98.67
PLN02624	474	ornithine-delta-aminotransferase	98.66
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	98.65
PRK04260	375	acetylornithine aminotransferase; Provisional	98.59
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	98.57
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.57
KOG1359|consensus	417		98.54
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	98.54
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	98.52
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	98.51
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	98.48
KOG1360|consensus	570		98.46
KOG1357|consensus	519		98.43
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	98.42
KOG2862|consensus	385		98.4
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	98.38
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	98.37
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	98.34
PRK12403	460	putative aminotransferase; Provisional	98.34
KOG0258|consensus	475		98.33
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	98.33
PLN02760	504	4-aminobutyrate:pyruvate transaminase	98.33
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	98.29
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	98.27
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.27
KOG0053|consensus	409		98.24
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	98.23
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	98.23
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	98.22
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	98.2
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	98.19
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	98.18
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	98.17
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	98.12
PRK06541	460	hypothetical protein; Provisional	98.12
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.11
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	98.1
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	98.1
PRK06062	451	hypothetical protein; Provisional	98.09
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	98.09
PLN00144	382	acetylornithine transaminase	98.08
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	98.06
PRK09792	421	4-aminobutyrate transaminase; Provisional	98.06
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	98.06
KOG0634|consensus	472		98.05
PRK08088	425	4-aminobutyrate aminotransferase; Validated	98.05
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	98.01
PRK04612	408	argD acetylornithine transaminase protein; Provisi	98.0
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	98.0
PLN02452	365	phosphoserine transaminase	97.99
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	97.96
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	97.95
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	97.95
PRK07481	449	hypothetical protein; Provisional	97.95
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	97.94
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	97.91
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	97.9
PRK06149	972	hypothetical protein; Provisional	97.9
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	97.89
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	97.86
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	97.83
PRK06105	460	aminotransferase; Provisional	97.82
COG3844	407	Kynureninase [Amino acid transport and metabolism]	97.81
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	97.79
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	97.78
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	97.77
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	97.76
PRK07678	451	aminotransferase; Validated	97.76
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	97.74
PRK07046	453	aminotransferase; Validated	97.73
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	97.72
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	97.71
PRK07036	466	hypothetical protein; Provisional	97.7
PRK07480	456	putative aminotransferase; Validated	97.68
PRK07482	461	hypothetical protein; Provisional	97.67
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	97.66
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	97.65
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	97.65
PRK12462	364	phosphoserine aminotransferase; Provisional	97.65
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	97.64
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	97.62
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	97.62
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	97.61
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	97.58
PRK06917	447	hypothetical protein; Provisional	97.57
KOG3843|consensus	432		97.57
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	97.55
PRK07483	443	hypothetical protein; Provisional	97.54
PRK06148	1013	hypothetical protein; Provisional	97.53
PRK05965	459	hypothetical protein; Provisional	97.52
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	97.44
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	97.35
PRK12566	954	glycine dehydrogenase; Provisional	97.23
PRK08297	443	L-lysine aminotransferase; Provisional	97.15
KOG1358|consensus	467		97.01
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	96.92
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	96.76
KOG2467|consensus	477		96.72
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	96.71
KOG0633|consensus	375		96.61
KOG1401|consensus	433		96.34
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	96.06
KOG1404|consensus	442		95.95
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	95.74
KOG1402|consensus	427		95.0
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	93.67
KOG1405|consensus	484		91.33
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	90.43
COG4100	416	Cystathionine beta-lyase family protein involved i	90.17
KOG2040|consensus	1001		86.31
COG2515	323	Acd 1-aminocyclopropane-1-carboxylate deaminase [A	82.7

>KOG0628|consensus

Probab=100.00  E-value=1.6e-68  Score=526.19  Aligned_cols=276  Identities=54%  Similarity=0.929  Sum_probs=267.7

Q ss_pred             CCCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhh
Q psy1596           2 PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYL   81 (375)
Q Consensus         2 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (375)
                      +++|...|++||++++  +  ++|+    ++.++|++||||||+||||||+++||+|++||||++++++.||+|..+   
T Consensus        40 ~llP~~aPe~pE~~~~--I--l~D~----ekiI~PGitHw~hP~fhAyfpa~~s~~siladmLs~~i~~vGFtW~ss---  108 (511)
T KOG0628|consen   40 DLLPSKAPEKPESWED--I--LGDL----EKIIMPGITHWQHPHFHAYFPAGNSYPSILADMLSGGIGCVGFTWASS---  108 (511)
T ss_pred             hhCCCCCCCChhhHHH--H--HHHH----HHHccCCCcccCCCceeeEccCccchHHHHHHHHhcccccccceeecC---
Confidence            5789999999999999  9  9999    999999999999999999999999999999999999999999999999   


Q ss_pred             hhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhH
Q psy1596          82 RHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDK  161 (375)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~  161 (375)
                                           |++|+||                                                    
T Consensus       109 ---------------------Pa~TELE----------------------------------------------------  115 (511)
T KOG0628|consen  109 ---------------------PACTELE----------------------------------------------------  115 (511)
T ss_pred             ---------------------cchHHHH----------------------------------------------------
Confidence                                 9999999                                                    


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                        ..+++||++|+++|         +.|++.+.   ..++|++++++|++++.++++||.++..+.+.+.|.+.+..+..
T Consensus       116 --~ivmDWL~kml~LP---------~~Fl~~~~---g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~  181 (511)
T KOG0628|consen  116 --VIVMDWLGKMLGLP---------AEFLSLGL---GDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLA  181 (511)
T ss_pred             --HHHHHHHHHHhcCc---------HHHhccCC---CCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhh
Confidence              99999999999999         78876553   67899999999999999999999999999998888888888889


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      ++++|+|+++|+|++||+.++++++|.+|+|+++.|+.+.|+++|++|.++|++||+|++|.|||.++++|+|++|..||
T Consensus       182 ~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc  261 (511)
T KOG0628|consen  182 RLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVC  261 (511)
T ss_pred             hheEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+||||||||+|++.+||++|.+.+|||+|||+++++|||+++.++|+.+|
T Consensus       262 ~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW  315 (511)
T KOG0628|consen  262 REEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW  315 (511)
T ss_pred             hhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence            999999999999999999999999999999999999999999999999999998

>PLN02590 probable tyrosine decarboxylase

Probab=100.00  E-value=2.5e-64  Score=522.28  Aligned_cols=266  Identities=39%  Similarity=0.699  Sum_probs=243.0

Q ss_pred             CCCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhh
Q psy1596           2 PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYL   81 (375)
Q Consensus         2 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (375)
                      +++|..+|++|+++++  +  ++|+    .+.++|+++||+||+||||+|+++++++++||||++++|+++++|..+   
T Consensus        97 ~~l~~~~P~~g~~~~~--i--l~~~----~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~s---  165 (539)
T PLN02590         97 DMLPDSAPERPESLKE--L--LDDV----SKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTS---  165 (539)
T ss_pred             HhcCCCCCCCCCCHHH--H--HHHH----HHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHHhcccccCCcccC---
Confidence            4578899999999998  9  9998    899999999999999999999999999999999999999999999999   


Q ss_pred             hhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhH
Q psy1596          82 RHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDK  161 (375)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~  161 (375)
                                           |++++||                                                    
T Consensus       166 ---------------------Pa~t~lE----------------------------------------------------  172 (539)
T PLN02590        166 ---------------------PAATELE----------------------------------------------------  172 (539)
T ss_pred             ---------------------chhHHHH----------------------------------------------------
Confidence                                 9999999                                                    


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                        +++++||++++|+|         +.|+. +    ..++|+||+|||+||++||++||++...+.+..        ..+
T Consensus       173 --~~vi~wl~~l~glp---------~~~~~-~----~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~--------~~~  228 (539)
T PLN02590        173 --IIVLDWLAKLLQLP---------DHFLS-T----GNGGGVIQGTGCEAVLVVVLAARDRILKKVGKT--------LLP  228 (539)
T ss_pred             --HHHHHHHHHHhCCC---------ccccc-C----CCCceEEcCchHHHHHHHHHHHHHHHHhhhccc--------CCC
Confidence              99999999999999         33331 1    236899999999999999999999765432111        135


Q ss_pred             ceEEEecCCCchHHHHHHHHcCC---eEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLV---KMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      +++||+|+++|+|+.||+++.|.   +++.||+|  ++++||+++|+++|++++++|.+|++||+|+|||.+|+||||++
T Consensus       229 ~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~  308 (539)
T PLN02590        229 QLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVP  308 (539)
T ss_pred             CEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHH
Confidence            78999999999999999986554   69999998  46899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |++||++||+||||||||||+++++|++++++.|+|+||||++|+||||++|++||++|
T Consensus       309 Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~ll  367 (539)
T PLN02590        309 LGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLW  367 (539)
T ss_pred             HHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999986

>PLN02880 tyrosine decarboxylase

Probab=100.00  E-value=6.2e-61  Score=494.39  Aligned_cols=265  Identities=42%  Similarity=0.727  Sum_probs=240.8

Q ss_pred             CCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhh
Q psy1596           3 VVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLR   82 (375)
Q Consensus         3 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (375)
                      .++..+|++|+++++  +  ++++    .+.++|+++||+||+||||+++++++++++||+|++++|+++++|..+    
T Consensus        50 ~~~~~~p~~~~~~~~--~--l~~~----~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~~~n~~~~~~~~s----  117 (490)
T PLN02880         50 LLPDSAPNQPETLDQ--V--LDDV----QAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITS----  117 (490)
T ss_pred             hccccCCCCCCCHHH--H--HHHH----HHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHHhhccCCcccccC----
Confidence            577889999999988  8  8888    888999999999999999999999999999999999999999999988    


Q ss_pred             hhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHH
Q psy1596          83 HQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKY  162 (375)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~l  162 (375)
                                          |++++||                                                     
T Consensus       118 --------------------p~~~~lE-----------------------------------------------------  124 (490)
T PLN02880        118 --------------------PAATELE-----------------------------------------------------  124 (490)
T ss_pred             --------------------cccHHHH-----------------------------------------------------
Confidence                                9999999                                                     


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                       +++++||++++|+|         +.|...     ..++|+||+|||+||++||++||++...+.+...        .++
T Consensus       125 -~~vi~wl~~l~g~p---------~~~~~~-----~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~--------~~~  181 (490)
T PLN02880        125 -MIVLDWLAKLLNLP---------EQFLST-----GNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA--------LEK  181 (490)
T ss_pred             -HHHHHHHHHHhCCC---------chhhcC-----CCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc--------cCC
Confidence             99999999999999         333210     2367999999999999999999998654322111        246


Q ss_pred             eEEEecCCCchHHHHHHHHcCC---eEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLV---KMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      ++||+|+++|||+.||+++.|.   +++.||+|+  +++||+++|+++|++++++|.+|++||+|+|||.+|++|||++|
T Consensus       182 ~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI  261 (490)
T PLN02880        182 LVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLEL  261 (490)
T ss_pred             eEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHH
Confidence            7999999999999999986554   589999974  78999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|++||+|+|||||||++++++|++++++.|+++||||++|+||||++|++||++|
T Consensus       262 ~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~ll  319 (490)
T PLN02880        262 GKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLW  319 (490)
T ss_pred             HHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEE
Confidence            9999999999999999999999999999999999999999999999999999999986

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=100.00  E-value=4.9e-61  Score=480.10  Aligned_cols=269  Identities=34%  Similarity=0.555  Sum_probs=234.1

Q ss_pred             CCCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhh
Q psy1596           2 PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYL   81 (375)
Q Consensus         2 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (375)
                      ..+|..+|++|++.++  +  ++|+    .+.+.|++++|+||+||+|+++++++++++||+|++++|+|+++|..+   
T Consensus         6 ~~~~~~lp~~~~~~~~--v--l~~~----~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~---   74 (373)
T PF00282_consen    6 ARLDEELPEEGESLEE--V--LKDL----REILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEAS---   74 (373)
T ss_dssp             GGCHCCHHSSHH-HHH--H--HHHH----HHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTS---
T ss_pred             hcCccccccCCCCHHH--H--HHHH----HHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccc---
Confidence            4578999999999999  9  8999    888999999999999999999999999999999999999999999988   


Q ss_pred             hhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhH
Q psy1596          82 RHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDK  161 (375)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~  161 (375)
                                           |++++||                                                    
T Consensus        75 ---------------------P~~~~~E----------------------------------------------------   81 (373)
T PF00282_consen   75 ---------------------PAATEIE----------------------------------------------------   81 (373)
T ss_dssp             ---------------------HHHHHHH----------------------------------------------------
T ss_pred             ---------------------cccccch----------------------------------------------------
Confidence                                 9999999                                                    


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                        +++++|+++++|+|.         .+..     ...++|+||+|||+||++|+++||++..++.+..+..     ..+
T Consensus        82 --~~vi~~l~~l~g~~~---------~~~~-----~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~-----~~~  140 (373)
T PF00282_consen   82 --REVIRWLADLFGLPE---------SFTF-----SKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVE-----EIP  140 (373)
T ss_dssp             --HHHHHHHHHHTTGSG---------GTTS-----TTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTT-----HCS
T ss_pred             --HHHHHHHHHHhCCcc---------cccc-----cCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccc-----ccc
Confidence              999999999999992         2210     0237899999999999999999999887654433211     035


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      +++||+|+.+|||+.|++.+.|..++.||+|++|+||+++|+++|+++.++|.+|++|++|+|||.+|++|||++|+++|
T Consensus       141 ~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~  220 (373)
T PF00282_consen  141 KPVIYVSEQAHYSIEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADIC  220 (373)
T ss_dssp             SEEEEEETTS-THHHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHH
T ss_pred             ccccccccccccHHHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhc
Confidence            78999999999999999998888899999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++++||||||||||+++++|+++++..|+++||||++|+||||++|++||++|
T Consensus       221 ~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l  274 (373)
T PF00282_consen  221 EKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLL  274 (373)
T ss_dssp             HHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEE
T ss_pred             cccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEE
Confidence            999999999999999999999999999999999999999999999999999985

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=100.00  E-value=1.2e-54  Score=449.68  Aligned_cols=275  Identities=19%  Similarity=0.245  Sum_probs=231.7

Q ss_pred             CCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCC-CChHHHHHHHHHHhhccccccchhhhhhhh
Q psy1596           5 PKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPAL-NSYPSLLGDMLSDAINCLGFTWVRTEYLRH   83 (375)
Q Consensus         5 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (375)
                      ...+|++|++.++  +  ++++    .+.++++++||+||+|||||+++ +++.+.++| |++++|+|+++|..|     
T Consensus        59 ~~~~p~~~~~~~~--~--~~~~----~~~~~~~~~~~~hP~f~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~s-----  124 (522)
T TIGR03799        59 SAEIPEQPTFVSE--H--TQFL----LDKLVAHSVHTASPSFIGHMTSALPYFMLPLSK-LMVALNQNLVKIETS-----  124 (522)
T ss_pred             ccCCCCCCCChHH--H--HHHH----HHHHHcCCCCCCCCCeEEeccCCCchHHHHHHH-HHHHhcCCcceeecC-----
Confidence            5679999999888  8  8888    88899999999999999999996 333344788 677999999999999     


Q ss_pred             hhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHH
Q psy1596          84 QNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYS  163 (375)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le  163 (375)
                                         |++++||                                                      
T Consensus       125 -------------------pa~t~lE------------------------------------------------------  131 (522)
T TIGR03799       125 -------------------KAFTPLE------------------------------------------------------  131 (522)
T ss_pred             -------------------cchHHHH------------------------------------------------------
Confidence                               9999999                                                      


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh-----
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE-----  238 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~-----  238 (375)
                      +++++||+++++.+.        ++|...--...+.++|+||+|||+||++||++||++.....+. ..+....+     
T Consensus       132 ~~v~~wl~~l~~~~~--------~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~-~~~~~~~gl~~~~  202 (522)
T TIGR03799       132 RQVLGMMHHLVYGQD--------DDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGD-FKGVAREGLFAAL  202 (522)
T ss_pred             HHHHHHHHHHhccCc--------ccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccc-ccccccccchhhh
Confidence            999999999996331        2221000000134679999999999999999999986432111 00111111     


Q ss_pred             ---hcCceEEEecCCCchHHHHHHHHcCC---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         239 ---INSRLVAYCSDQAHSSVEKAGLIGLV---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       239 ---~~~~~vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                         ..++++||+|+.+|+|+.|++++.+.   +++.||+|++|+||+++|+++|+++.++|.+|++|++|+|||++|++|
T Consensus       203 ~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiD  282 (522)
T TIGR03799       203 KHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNID  282 (522)
T ss_pred             hhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcC
Confidence               12467999999999999999976544   899999999999999999999999988899999999999999999999


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ||++|+++|+++|+|+|||||||++.++++++++++.|+++|||+++|+||||++|+|||++|
T Consensus       283 pl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~ll  345 (522)
T TIGR03799       283 PLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVL  345 (522)
T ss_pred             CHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEE
Confidence            999999999999999999999999999999999999999999999999999999999999985

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=100.00  E-value=2.2e-53  Score=444.80  Aligned_cols=252  Identities=18%  Similarity=0.168  Sum_probs=214.7

Q ss_pred             cchhhhHhhhhcccccCCCC-CceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhcccc
Q psy1596          25 DVGFYYLRHFAELITHWQSP-YMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINA  103 (375)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  103 (375)
                      ++...+.+.+.+++++|+|| ||+||+++++++||++||++++++|+|+.+|+.|                        |
T Consensus        64 ~~l~~l~~~l~~~sv~~~~P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~S------------------------P  119 (608)
T TIGR03811        64 DVLDELSSRLRTESVPWHSAGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESS------------------------P  119 (608)
T ss_pred             HHHHHHHHHHhcCCCCCCCccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccC------------------------c
Confidence            33333378888999999999 9999999999999999999999999999999999                        9


Q ss_pred             ccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCC
Q psy1596         104 ACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTP  183 (375)
Q Consensus       104 ~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~  183 (375)
                      ++++||                                                      +++++||++|+|++      
T Consensus       120 ~~t~lE------------------------------------------------------~~vi~~la~l~G~~------  139 (608)
T TIGR03811       120 ATSQME------------------------------------------------------EEVGKEFATLMGYK------  139 (608)
T ss_pred             hHHHHH------------------------------------------------------HHHHHHHHHHhCCC------
Confidence            999999                                                      99999999999998      


Q ss_pred             CchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHH-----HHhhc----cCCcchh------------------
Q psy1596         184 SLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAI-----RKYQQ----SHPELEH------------------  236 (375)
Q Consensus       184 ~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~-----~~~~~----~~~~~~~------------------  236 (375)
                                    . ++|+||||||+||++||++||+.+.     .+.+.    +..+|+.                  
T Consensus       140 --------------~-~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~  204 (608)
T TIGR03811       140 --------------N-GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQ  204 (608)
T ss_pred             --------------C-CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccc
Confidence                          2 5799999999999999999999641     11000    0001100                  


Q ss_pred             ------h-----hhcCce-EEEecCCCchHHHHHHHHcC---CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEE
Q psy1596         237 ------A-----EINSRL-VAYCSDQAHSSVEKAGLIGL---VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCG  301 (375)
Q Consensus       237 ------~-----~~~~~~-vV~~S~~aH~Sv~kaa~lg~---~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~  301 (375)
                            .     ....++ ++++|+.+|||+.||+.+.|   .+++.||+|++++||+++|+++|+++.++|.+|++||+
T Consensus       205 ~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVa  284 (608)
T TIGR03811       205 IDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVG  284 (608)
T ss_pred             hhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEE
Confidence                  0     001223 79999999999999997544   37999999999999999999999999999999999999


Q ss_pred             EcCCCCccccccHHHHHHHH---HhcCC--EEEEecccccCc--cc------------------------------chhh
Q psy1596         302 TLGTTGACAFDNLEELGPIC---EKEGL--WLHVDAAYAGSS--FI------------------------------CPEF  344 (375)
Q Consensus       302 t~GtT~tGavDpl~eI~~ia---~~~~i--wlHVDaA~gg~~--~~------------------------------~~~~  344 (375)
                      |+|||++|+||||++|+++|   +++|+  ||||||||||++  ++                              ++++
T Consensus       285 taGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~  364 (608)
T TIGR03811       285 VVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREV  364 (608)
T ss_pred             EcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhH
Confidence            99999999999999999999   67887  699999999975  22                              2467


Q ss_pred             hhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         345 RKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       345 ~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++++|+++||||++||||||++||+||+++
T Consensus       365 ~~~l~gle~ADSItvDpHK~g~~Py~~G~ll  395 (608)
T TIGR03811       365 YNAYKAISEAESVTIDPHKMGYIPYSAGGIV  395 (608)
T ss_pred             HHHHhcCcCceEEEeCcccccccCCCeEEEE
Confidence            8899999999999999999999999999874

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>KOG0629|consensus

Probab=100.00  E-value=5.2e-50  Score=391.62  Aligned_cols=260  Identities=26%  Similarity=0.337  Sum_probs=239.0

Q ss_pred             CCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhh
Q psy1596           3 VVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLR   82 (375)
Q Consensus         3 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (375)
                      .+.-++|+++++.+|  +  +.++     +..+...+...|||||....++..+.+++|+||+++.|.|.||++..    
T Consensus        70 l~nlel~~~~esl~q--i--l~~c-----r~tl~y~vKTgHprffNQl~~glD~~~Lag~wlT~t~Ntn~~TYEiA----  136 (510)
T KOG0629|consen   70 LFNLELRDQPESLAQ--I--LEDC-----RDTLKYSVKTGHPRFFNQLSSGLDPIGLAGEWLTSTANTNMFTYEIA----  136 (510)
T ss_pred             HhCcccCCChhhHHH--H--HHHH-----HHHHHhhhccCCCcchhhhccCCCHHHHHHHHHHhccCCCCceEEec----
Confidence            356789999999999  8  8888     77889999999999999999999999999999999999999999766    


Q ss_pred             hhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHH
Q psy1596          83 HQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKY  162 (375)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~l  162 (375)
                                          |..+-+|                                                     
T Consensus       137 --------------------PvF~lmE-----------------------------------------------------  143 (510)
T KOG0629|consen  137 --------------------PVFVLME-----------------------------------------------------  143 (510)
T ss_pred             --------------------ceEEeeh-----------------------------------------------------
Confidence                                9999999                                                     


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                       ++|+..+.++.|++                    ..++|+|.+||+.||++|+.+||.+..++.+..+.     ...|.
T Consensus       144 -~~vl~km~~ivGw~--------------------~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm-----~~~p~  197 (510)
T KOG0629|consen  144 -EEVLAKMREIVGWE--------------------EGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGM-----FALPP  197 (510)
T ss_pred             -HHHHHHHHHHhCCC--------------------CCCCceecCCchhHHHHHHHHHHhhcCchhhhhhh-----hcCCc
Confidence             99999999999999                    34789999999999999999999876655433221     12467


Q ss_pred             eEEEecCCCchHHHHHHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      +++|+|+++|||+.|++..   |...++.|++|+.|+|++++||+.|-++.++|..||+|.+|+|||+.|++|||+.|++
T Consensus       198 lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iad  277 (510)
T KOG0629|consen  198 LILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIAD  277 (510)
T ss_pred             EEEEecccchhhHHHHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHH
Confidence            8999999999999999853   4578999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +|++|++|+||||||||+.+++..+|+++.|+|+|||++++|||++++|..||++
T Consensus       278 iC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~  332 (510)
T KOG0629|consen  278 ICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAF  332 (510)
T ss_pred             HHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHH
Confidence            9999999999999999999999999999999999999999999999999999975

>PLN02263 serine decarboxylase

Probab=100.00  E-value=1.2e-47  Score=390.06  Aligned_cols=229  Identities=19%  Similarity=0.201  Sum_probs=200.8

Q ss_pred             ccchhhhHhhhhcccccCCCCCceeecCCCCCh-HHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhccc
Q psy1596          24 SDVGFYYLRHFAELITHWQSPYMHAYFPALNSY-PSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDIN  102 (375)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (375)
                      +++..-|.+.+.|..+|     |+|| |...++ ++.++++|...+|+.++.|..+                        
T Consensus        76 ~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s------------------------  125 (470)
T PLN02263         76 ASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIES------------------------  125 (470)
T ss_pred             HHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccC------------------------
Confidence            34444448889998877     9999 888899 8999999999999999999887                        


Q ss_pred             c---ccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCC
Q psy1596         103 A---ACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTK  179 (375)
Q Consensus       103 p---~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~  179 (375)
                      |   .++++|                                                      +++++|+++++|+|. 
T Consensus       126 ~~~~~s~~~E------------------------------------------------------~~Vi~wla~L~g~p~-  150 (470)
T PLN02263        126 NYGVHSRQFE------------------------------------------------------VGVLDWFARLWEIEK-  150 (470)
T ss_pred             CcchhHHHHH------------------------------------------------------HHHHHHHHHHhCCCC-
Confidence            6   577788                                                      999999999999982 


Q ss_pred             CCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH
Q psy1596         180 DPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG  259 (375)
Q Consensus       180 ~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa  259 (375)
                                        +..+|+||+||||||++|+++||++.                 ++.++|+|+++|+|+.||+
T Consensus       151 ------------------~~~~G~vtsGGTEaNL~Al~aARe~~-----------------~~~vvy~S~~aH~Sv~KAa  195 (470)
T PLN02263        151 ------------------NEYWGYITNCGTEGNLHGILVGREVF-----------------PDGILYASRESHYSVFKAA  195 (470)
T ss_pred             ------------------CCCeEEEeCcHHHHHHHHHHHHHhhc-----------------CCcEEEEcCCccHHHHHHH
Confidence                              34579999999999999999999852                 2358999999999999999


Q ss_pred             HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCC-----EEEEeccc
Q psy1596         260 LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGL-----WLHVDAAY  334 (375)
Q Consensus       260 ~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~i-----wlHVDaA~  334 (375)
                      ++.+.+++.||+|++|+||+++|+++|++++   .+|++|++|+|||.+|++|||++|+++|+++|+     ||||||||
T Consensus       196 ~llgi~~~~Vp~d~~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~  272 (470)
T PLN02263        196 RMYRMECVKVDTLVSGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGAL  272 (470)
T ss_pred             HhcCCcceEeccCCCCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccc
Confidence            9988899999999999999999999998764   369999999999999999999999999999997     99999999


Q ss_pred             ccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         335 AGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       335 gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ||+++...+....+.+.+.+|||++|+|||+++|++||++|
T Consensus       273 GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll  313 (470)
T PLN02263        273 FGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQI  313 (470)
T ss_pred             hhhHhhhcccccccCCCcCccEEEECCccccCCCcCEEEEE
Confidence            99876332223345666779999999999999999999985

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-45  Score=377.27  Aligned_cols=256  Identities=24%  Similarity=0.300  Sum_probs=227.2

Q ss_pred             CCCCCCCCCCcccccccccccchhhhHh-hhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhh
Q psy1596           5 PKLIPNQGETSKQENDLRNSDVGFYYLR-HFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRH   83 (375)
Q Consensus         5 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (375)
                      ...+|+.|.+.++  +  +.++    .. .+.+...+++||+++.|..+...++++++++++.++|+|...|..+     
T Consensus        30 ~~~~p~~g~p~~~--v--~~~l----~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~-----   96 (460)
T COG0076          30 SRMAPEKGEPLEE--V--LDEL----AELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDES-----   96 (460)
T ss_pred             hccCCccCCchhh--H--HHHH----HHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccC-----
Confidence            4568999999888  8  7777    23 4677888899999999999999999999999999999999999999     


Q ss_pred             hhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHH
Q psy1596          84 QNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYS  163 (375)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le  163 (375)
                                         |+++++|                                                      
T Consensus        97 -------------------p~a~~~E------------------------------------------------------  103 (460)
T COG0076          97 -------------------PAAAELE------------------------------------------------------  103 (460)
T ss_pred             -------------------hhHHHHH------------------------------------------------------
Confidence                               9999999                                                      


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++|+++|+|+|                    ....|+||+||||||++|++++|+++.+...... +    .....+
T Consensus       104 ~~~v~~l~~l~~~~--------------------~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~-~----~~~~~P  158 (460)
T COG0076         104 ERVVNMLSDLLGAP--------------------EEASGTFTSGGTEANLLALLAARERWRKRALAES-G----KPGGKP  158 (460)
T ss_pred             HHHHHHHHHHhCCC--------------------CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc-c----ccCCCC
Confidence            99999999999998                    4578999999999999999999998764321110 0    001245


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      +||+|+.+|+|+.|++++.|..++.+|++. +++||+++|+++|++++..|    +||+|+|||.+|.+|||++|++||+
T Consensus       159 ~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~ia~ia~  234 (460)
T COG0076         159 NIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEELADIAE  234 (460)
T ss_pred             eEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHHHHHHH
Confidence            899999999999999999999999999877 89999999999999998866    7999999999999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhh-hcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKW-LAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~-~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++++|+||||||||+.+..++++.. ..+++.||||++|+|||+++|++||+++
T Consensus       235 ~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il  288 (460)
T COG0076         235 EYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVL  288 (460)
T ss_pred             HcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEE
Confidence            9999999999999999877777776 6899999999999999999999999874

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=100.00  E-value=1.8e-40  Score=337.21  Aligned_cols=251  Identities=14%  Similarity=0.129  Sum_probs=205.9

Q ss_pred             CCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhh
Q psy1596           5 PKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQ   84 (375)
Q Consensus         5 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (375)
                      ...+|++|.+.++  +  ++.+    .+.+.  ..+-.||+|++|+..+..+.  +.|++..++|++.+.|..+      
T Consensus        14 ~~~~p~~~~~~~~--~--~~~~----~~~iy--ld~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~------   75 (431)
T TIGR01788        14 KYRMPEEEMPPDA--A--YQLI----HDELS--LDGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEY------   75 (431)
T ss_pred             cccCCCCCCCHHH--H--HHHH----HHHhh--hcCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccC------
Confidence            4578999998888  7  6776    44432  36778999999999887666  6999999999998899777      


Q ss_pred             hccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHH
Q psy1596          85 NRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSS  164 (375)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~  164 (375)
                                        |..+++|                                                      +
T Consensus        76 ------------------~~~~~le------------------------------------------------------~   83 (431)
T TIGR01788        76 ------------------PQTAEIE------------------------------------------------------N   83 (431)
T ss_pred             ------------------ccHHHHH------------------------------------------------------H
Confidence                              8888888                                                      9


Q ss_pred             HHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceE
Q psy1596         165 KVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV  244 (375)
Q Consensus       165 ~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~v  244 (375)
                      ++++|+++++|++..       .          +...|++||||||||++|+.++|++...+.+..+.      ...+++
T Consensus        84 ~~~~~la~llg~~~~-------~----------~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~------~~~~~~  140 (431)
T TIGR01788        84 RCVNMLADLWHAPAK-------D----------AEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGK------PTDKPN  140 (431)
T ss_pred             HHHHHHHHHhCCCCC-------C----------CCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCcE
Confidence            999999999999820       0          13567889999999999999998653322111100      012458


Q ss_pred             EEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         245 AYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       245 V~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      ||+|+.+|+|+.|++++.+.+++.||+|++ ++||+++|+++|+++      +++|++|+|||++|++|||++|+++|++
T Consensus       141 ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~  214 (431)
T TIGR01788       141 LVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDE  214 (431)
T ss_pred             EEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHH
Confidence            999999999999999877789999999875 699999999999865      5699999999999999999999999999


Q ss_pred             c------CCEEEEecccccCcc--cchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         324 E------GLWLHVDAAYAGSSF--ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       324 ~------~iwlHVDaA~gg~~~--~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +      |+|+||||||||+++  .+++.+..+. ++++||+++|+|||+++|+|||+||
T Consensus       215 ~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~  273 (431)
T TIGR01788       215 YNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVI  273 (431)
T ss_pred             HHhhhCCCceEEEecccHHHHHHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEE
Confidence            9      999999999999864  2455554444 6789999999999999999999986

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK02769 histidine decarboxylase; Provisional

Probab=100.00  E-value=5.3e-39  Score=322.01  Aligned_cols=216  Identities=23%  Similarity=0.263  Sum_probs=182.4

Q ss_pred             CCCCceeecCCCCCh-HHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhcccc----ccccccccccccc
Q psy1596          42 QSPYMHAYFPALNSY-PSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINA----ACSTTNSKHHAVE  116 (375)
Q Consensus        42 ~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~lE~~~~~~~  116 (375)
                      +||++|.++|...++ ++.+++++....|+.+ .|...                        +    .+.++|       
T Consensus        20 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~g-np~~~------------------------~~~g~~~~~~e-------   67 (380)
T PRK02769         20 HNQYFNVGYPEAADFDYSALKRFFSFSINNCG-DPYSK------------------------SNYPLNSFDFE-------   67 (380)
T ss_pred             HhhhcccCCCchhhcCHHHHHHHHHhhhccCC-Ccccc------------------------CCCCCChHHHH-------
Confidence            799999999999988 6999999999998654 45433                        2    134444       


Q ss_pred             cccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCC
Q psy1596         117 KTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFL  196 (375)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~  196 (375)
                                                                     +++++|+++++|++.                  
T Consensus        68 -----------------------------------------------~~~~~~~a~l~g~~~------------------   82 (380)
T PRK02769         68 -----------------------------------------------RDVMNFFAELFKIPF------------------   82 (380)
T ss_pred             -----------------------------------------------HHHHHHHHHHhCCCC------------------
Confidence                                                           999999999999983                  


Q ss_pred             CCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCC
Q psy1596         197 RPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLS  276 (375)
Q Consensus       197 ~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~  276 (375)
                       +..+|+|||||||||++|++++|+..                 ++.+||+|+.+|+|+.|++++.+.+.+.||++++|+
T Consensus        83 -~~~~G~~TsGgTean~~a~~~ar~~~-----------------~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~  144 (380)
T PRK02769         83 -NESWGYITNGGTEGNLYGCYLARELF-----------------PDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGE  144 (380)
T ss_pred             -CCCCEEEecChHHHHHHHHHHHHHhC-----------------CCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCc
Confidence             23469999999999999999998742                 235899999999999999987777888999999999


Q ss_pred             cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcC---CEEEEecccccCcccchhhhhhhcCCCc
Q psy1596         277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEG---LWLHVDAAYAGSSFICPEFRKWLAGVEY  353 (375)
Q Consensus       277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~---iwlHVDaA~gg~~~~~~~~~~~~~gie~  353 (375)
                      ||+++|+++|+++   +..|++|++++|||++|++||+++|+++|+++|   +|+|||||||++.+...+.+..++..+.
T Consensus       145 id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~  221 (380)
T PRK02769        145 IDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADG  221 (380)
T ss_pred             CcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCC
Confidence            9999999999876   556889999999999999999999999999998   6999999999987643332223444447


Q ss_pred             ccEEEEcCcccCCCCCcceeeC
Q psy1596         354 ANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       354 aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +||+++|+|||+++|+|||++|
T Consensus       222 vDsis~s~HK~~~~P~g~G~l~  243 (380)
T PRK02769        222 IDSIAISGHKFIGSPMPCGIVL  243 (380)
T ss_pred             CCEEEECCcccCCCCCCcEEEE
Confidence            8999999999999999999985

>PLN03032 serine decarboxylase; Provisional

Probab=100.00  E-value=7.2e-38  Score=312.78  Aligned_cols=220  Identities=20%  Similarity=0.217  Sum_probs=178.0

Q ss_pred             CCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhcccccccccccccccccccccc
Q psy1596          42 QSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHY  121 (375)
Q Consensus        42 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~  121 (375)
                      ++.+|.||.....--++.+..|+....|..+.-|...                     ..+..+.++|            
T Consensus        22 ~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~---------------------~~g~~a~~~e------------   68 (374)
T PLN03032         22 KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIES---------------------NYGVHSRQFE------------   68 (374)
T ss_pred             hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccC---------------------CCCccHHHHH------------
Confidence            7788999987776667888888887777665444322                     0012344444            


Q ss_pred             CCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCc
Q psy1596         122 KPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNF  201 (375)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~  201 (375)
                                                                +++++|+++++|++.                   +..+
T Consensus        69 ------------------------------------------~~v~~~ia~llg~~~-------------------~~~~   87 (374)
T PLN03032         69 ------------------------------------------VGVLDWFARLWELEK-------------------DEYW   87 (374)
T ss_pred             ------------------------------------------HHHHHHHHHHhCCCC-------------------ccCC
Confidence                                                      999999999999983                   3346


Q ss_pred             EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHH
Q psy1596         202 ITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDK  281 (375)
Q Consensus       202 GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~  281 (375)
                      |+|||||||||++|++++|+..                 ++.+||+|+.+|+|+.|++++.+..++.||+|++|+||+++
T Consensus        88 G~fTsGGTEaNl~al~~ar~~~-----------------~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~  150 (374)
T PLN03032         88 GYITTCGTEGNLHGILVGREVF-----------------PDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDD  150 (374)
T ss_pred             EEEeCchHHHHHHHHHHHHHhC-----------------CCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHH
Confidence            9999999999999999998742                 22479999999999999998877788999999999999999


Q ss_pred             HHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcC-----CEEEEecccccCcccchhhhhhhcCCCcccE
Q psy1596         282 LIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEG-----LWLHVDAAYAGSSFICPEFRKWLAGVEYANS  356 (375)
Q Consensus       282 Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~-----iwlHVDaA~gg~~~~~~~~~~~~~gie~aDS  356 (375)
                      |+++|++++.   .|++|++++|||++|++||+++|+++|+++|     +|+|||||||++.+........++..+.+||
T Consensus       151 L~~~i~~~~~---~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDS  227 (374)
T PLN03032        151 LERALAKNRD---KPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGS  227 (374)
T ss_pred             HHHHHHHcCC---CCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcE
Confidence            9999987532   4889999999999999999999999999996     5999999999986532111122233356899


Q ss_pred             EEEcCcccCCCCCcceeeC
Q psy1596         357 IAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       357 i~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+|||+++|+|||+|+
T Consensus       228 is~s~HK~~g~P~g~G~ll  246 (374)
T PLN03032        228 VSVSGHKFLGCPMPCGVAL  246 (374)
T ss_pred             EEECcccccCCCcCeEEEE
Confidence            9999999999999999985

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=100.00  E-value=4.8e-34  Score=279.43  Aligned_cols=228  Identities=37%  Similarity=0.521  Sum_probs=192.9

Q ss_pred             ceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhhhccccCCccchhhhhccccccccccccccccccccccCCCC
Q psy1596          46 MHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTS  125 (375)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~  125 (375)
                      |+++|++++.++++++|+++.++|++..+|..+                        |..+++|                
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~------------------------~~~~~le----------------   40 (345)
T cd06450           1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDES------------------------PAATEME----------------   40 (345)
T ss_pred             CcccccCCCcHHHHHHHHHHHhcCCCCcccccC------------------------chhHHHH----------------
Confidence            788999999999999999999999999888877                        8888888                


Q ss_pred             CchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe
Q psy1596         126 PFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ  205 (375)
Q Consensus       126 ~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft  205 (375)
                                                            +++++|+++++|++.                   ....++||
T Consensus        41 --------------------------------------~~~~~~~~~~~g~~~-------------------~~~~~~~t   63 (345)
T cd06450          41 --------------------------------------AEVVNWLAKLFGLPS-------------------EDADGVFT   63 (345)
T ss_pred             --------------------------------------HHHHHHHHHHhCCCC-------------------CCCCEEEe
Confidence                                                  999999999999972                   23469999


Q ss_pred             CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHH
Q psy1596         206 TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEA  285 (375)
Q Consensus       206 sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~a  285 (375)
                      +|||+||++++.+++.+..++.+....     ...++.+|++++.+|+|+.+++.+.+.+++.||+++++.+|+++|+++
T Consensus        64 ~ggt~a~~~al~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~  138 (345)
T cd06450          64 SGGSESNLLALLAARDRARKRLKAGGG-----RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAA  138 (345)
T ss_pred             CChhHHHHHHHHHHHHHhhhhhhcccc-----cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHH
Confidence            999999999999998754322111000     001245899999999999999987788999999988899999999999


Q ss_pred             HHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccC
Q psy1596         286 IERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWL  365 (375)
Q Consensus       286 I~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l  365 (375)
                      |+++.++|..+.+|+++.++|++|.++|+++|+++|+++|+|+|+|+||+++.......+....+++.+|++++++|||+
T Consensus       139 i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l  218 (345)
T cd06450         139 IDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYG  218 (345)
T ss_pred             HHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhh
Confidence            99877777778889999999999999999999999999999999999999987654444443445667999999999999


Q ss_pred             CCCCcceeeC
Q psy1596         366 MVHFDCTAMW  375 (375)
Q Consensus       366 ~~P~~~g~l~  375 (375)
                      ++|++||+++
T Consensus       219 ~~p~g~g~~~  228 (345)
T cd06450         219 LVPLGCSAVL  228 (345)
T ss_pred             CCCcchHHHH
Confidence            9999999864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.91  E-value=1.1e-23  Score=208.33  Aligned_cols=169  Identities=18%  Similarity=0.220  Sum_probs=141.6

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      +++-+++++++++++|.+                    + ...+|||||||+|.+|+..+......+             
T Consensus        43 ~~~ve~AR~~iA~llga~--------------------~-~eIiFTSG~TEsnNlaI~g~~~a~~~~-------------   88 (386)
T COG1104          43 RKAVEEAREQIAKLLGAD--------------------P-EEIIFTSGATESNNLAIKGAALAYRNA-------------   88 (386)
T ss_pred             HHHHHHHHHHHHHHhCCC--------------------C-CeEEEecCCcHHHHHHHHhhHHhhhcc-------------
Confidence            344478899999999998                    2 579999999999999998754432111             


Q ss_pred             cCceEEEecCCCchHHHHHHH-H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGL-I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~-l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      ..+-.|++|...|.|+...++ +  .|.++.++|+|.+|++|+++|+++|++++      .+|.+.+.++++|.++||+|
T Consensus        89 ~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T------~LVSim~aNnE~G~IQpI~e  162 (386)
T COG1104          89 QKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDT------ILVSIMHANNETGTIQPIAE  162 (386)
T ss_pred             cCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCc------eEEEEEecccCeeecccHHH
Confidence            023379999999999999985 4  47899999999999999999999999774      48999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|++++++||||++++.+.+..+-     ..+ .+|.+++|+||+ +.|.|+|+||
T Consensus       163 i~~i~k~~~i~fHvDAvQa~Gkipi~~-----~~~-~vD~ls~SaHK~-~GpkGiGaLy  214 (386)
T COG1104         163 IGEICKERGILFHVDAVQAVGKIPIDL-----EEL-GVDLLSFSAHKF-GGPKGIGALY  214 (386)
T ss_pred             HHHHHHHcCCeEEEehhhhcCceeccc-----ccc-CcceEEeehhhc-cCCCceEEEE
Confidence            999999999999999999999875431     111 279999999996 5799999987

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.91  E-value=4.6e-23  Score=203.72  Aligned_cols=182  Identities=20%  Similarity=0.258  Sum_probs=145.0

Q ss_pred             CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596         152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH  231 (375)
Q Consensus       152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~  231 (375)
                      ++..+.+...+++++.+++++++|.+.                     ..+++|+|||++|..++.+++....       
T Consensus        50 ~~~~~~~~~~~~~~~~~~la~~~g~~~---------------------~~~~~~~ggt~a~~~a~~~~~~~~~-------  101 (371)
T PRK13520         50 DPGLFPGTAKLEEEAVEMLGELLHLPD---------------------AYGYITSGGTEANIQAVRAARNLAK-------  101 (371)
T ss_pred             CcccCccHHHHHHHHHHHHHHHhCCCC---------------------CCeEEecCcHHHHHHHHHHHHhhcc-------
Confidence            333345677888999999999999872                     2579999999999999988765310       


Q ss_pred             CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                              .++..|++++.+|+|+.+++...|.+++.||+++++.+|+++|+++|+++      +.+|+++.++|++|.+
T Consensus       102 --------~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~vi~~~~~~~tG~~  167 (371)
T PRK13520        102 --------AEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDN------TIGIVGIAGTTELGQV  167 (371)
T ss_pred             --------CCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhC------CEEEEEEcCCcCCccc
Confidence                    12357899999999999998877889999999888999999999999754      3467788899999999


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCccc-chhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|+++|+++|+++|+++|||+||+++.+. .......-.....+|++++++|||+++|.++|.++
T Consensus       168 ~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~  232 (371)
T PRK13520        168 DPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGIL  232 (371)
T ss_pred             CCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEE
Confidence            99999999999999999999999986531 11100000113357999999999999999998663

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.90  E-value=2e-22  Score=199.58  Aligned_cols=174  Identities=21%  Similarity=0.284  Sum_probs=135.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .+++++++++++++|.+.                     ..+++++|||++|+.++.+++.....  +           .
T Consensus        59 ~~~~~~~~~la~~~g~~~---------------------~~~~~~~g~~~~~~~~~~~~~~~~~~--~-----------~  104 (373)
T TIGR03812        59 KIEEEVVGSLGNLLHLPD---------------------AYGYIVSGGTEANIQAVRAAKNLARE--E-----------K  104 (373)
T ss_pred             HHHHHHHHHHHHHhCCCC---------------------CCeEEeccHHHHHHHHHHHHHHHHhc--c-----------C
Confidence            344899999999999972                     34789999999999988776542110  0           1


Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      ++..|++++.+|+++.++++..|.+++.+|+++++.+|+++|++++++++      ..++.+.++|++|.++|+++|+++
T Consensus       105 ~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l  178 (373)
T TIGR03812       105 RTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKI  178 (373)
T ss_pred             CCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHH
Confidence            23478999999999999998888899999998899999999999997642      345666689999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchh----hhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPE----FRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~----~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++|+|+|||+||+++.+....    +....-....+|++++|+|||++.|.++|.+
T Consensus       179 ~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~  236 (373)
T TIGR03812       179 ALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGI  236 (373)
T ss_pred             HHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEE
Confidence            99999999999999876431100    0000001125799999999999999999854

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.89  E-value=4.8e-22  Score=202.50  Aligned_cols=176  Identities=19%  Similarity=0.147  Sum_probs=136.9

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChH-HHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTAS-ESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT-~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      ...+.+++.+|+++++|.+                    ....+++++||| +++.+++.+++.+.              
T Consensus       103 ~~~l~~~~e~~~~~~~G~~--------------------~~~~a~~v~~~Tg~al~laL~alr~~~--------------  148 (444)
T TIGR03531       103 LYKLTNKLVKDFLKLLGLR--------------------SIKSAFVVPLATGMSLSLCLSALRHKR--------------  148 (444)
T ss_pred             HHHHHHHHHHHHHHHcCCC--------------------CCCEEEEECCHHHHHHHHHHHHcCCcC--------------
Confidence            3455588899999999998                    334589999999 78989988776421              


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                        .++..|+++..+|.|+.||+.+.|.+++.|++   ++++.||+++|+++|++...  ..+.+|+.|.+++..|..|||
T Consensus       149 --~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL  224 (444)
T TIGR03531       149 --PKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDI  224 (444)
T ss_pred             --CCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCH
Confidence              01235667778899999999999999999995   46799999999999985321  224456655556667799999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhh-cCC--CcccEEEEcCcccCCCCCcceeeC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWL-AGV--EYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~-~gi--e~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|++||+|+|||+|||...   +.+.++. .++  +++|++++|+|||+.+|.++|+++
T Consensus       225 ~eIa~la~k~gI~lIvDaAyg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~  285 (444)
T TIGR03531       225 EEIAKICANYDIPHIVNNAYGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIY  285 (444)
T ss_pred             HHHHHHHHHcCCEEEEECcCcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEE
Confidence            999999999999999999999743   3333333 343  368999999999999999998863

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.87  E-value=2.6e-21  Score=195.64  Aligned_cols=163  Identities=20%  Similarity=0.185  Sum_probs=136.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHH-HHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLA-GRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~a-ar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +++++.+++++|.+                    +....+||+|.|+++.....+ .+..                 .++
T Consensus        69 e~aRe~va~~~~a~--------------------~~~eIvft~~tT~aln~va~~l~~~~-----------------~~g  111 (405)
T COG0520          69 EAAREAVARFLNAD--------------------SSDEIVFTRGTTEALNLVARGLGRSL-----------------KPG  111 (405)
T ss_pred             HHHHHHHHHHhCCC--------------------CCCeEEEeCChhHHHHHHHHHhhhhh-----------------cCC
Confidence            88999999999998                    345699999999995544443 3220                 134


Q ss_pred             eEEEecCCCchHHHHHHH-H---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGL-I---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~-l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      +.|++|+..|.|+.-.++ +   .|.+++.||++++|.++.+++++.|.+.+      .+|+++..++.+|.+.|+++|+
T Consensus       112 deIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~T------klvais~vSn~tG~~~pv~~I~  185 (405)
T COG0520         112 DEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKT------KLVALSHVSNVTGTVNPVKEIA  185 (405)
T ss_pred             CEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCc------eEEEEECccccccccchHHHHH
Confidence            689999999999998874 3   47899999999999999999999877654      4999999999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|+|+.||||++.+.+...     ++.+ .||.+.+++|||++.|.|+|+||
T Consensus       186 ~la~~~ga~v~VDaaq~~~h~~id-----v~~l-~~Df~afsgHKwl~gP~GiGvLy  236 (405)
T COG0520         186 ELAHEHGALVLVDAAQAAGHLPID-----VQEL-GCDFLAFSGHKWLLGPTGIGVLY  236 (405)
T ss_pred             HHHHHcCCEEEEECccccCccCCC-----chhc-CCCEEEEcccccccCCCceEEEE
Confidence            999999999999999999976432     1111 47999999999999999999997

>KOG1383|consensus

Probab=99.85  E-value=7e-21  Score=189.45  Aligned_cols=186  Identities=17%  Similarity=0.148  Sum_probs=159.2

Q ss_pred             cCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhh
Q psy1596         149 DKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQ  228 (375)
Q Consensus       149 ~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~  228 (375)
                      ++-+++++++..+++.+++++++.||+-+                    +...|..|+|||||.+.+....|++.....+
T Consensus       108 N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~--------------------~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~  167 (491)
T KOG1383|consen  108 NPLHPDEFPVVRKLEAECVNMIANLFNAP--------------------SDSCGCGTVGGSESGLAAKKSYRNRRKAQKG  167 (491)
T ss_pred             CccCccccchhHHHHHHHHHHHHHHhcCC--------------------ccccCccccccchHHHHHHHHHHHHHHhccC
Confidence            67788888999999999999999999998                    3367899999999988888877776533211


Q ss_pred             ccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC
Q psy1596         229 QSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG  307 (375)
Q Consensus       229 ~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~  307 (375)
                                 ..++.++++...|.+++|+++..+.+++.||++ .+++||+.++.++|.+.      .++||+.+|++.
T Consensus       168 -----------I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eN------ti~lv~~~~~~p  230 (491)
T KOG1383|consen  168 -----------IDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDEN------TIMLVGSLPNFP  230 (491)
T ss_pred             -----------CCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccc------eEEEEEEcCCCC
Confidence                       235678999999999999999999999999998 78999999999999886      459999999999


Q ss_pred             ccccccHHHHHHHHHh-cCCEEEEecccccCccc--c---hhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         308 ACAFDNLEELGPICEK-EGLWLHVDAAYAGSSFI--C---PEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       308 tGavDpl~eI~~ia~~-~~iwlHVDaA~gg~~~~--~---~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +|.+||+++|.++..+ +++.+|||+|-|++...  .   .++..   ++.++-|++.|.||.+++|.|.|.+
T Consensus       231 ~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdF---r~p~V~Sisa~~HKYGl~~~G~~~v  300 (491)
T KOG1383|consen  231 TGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDF---RVPGVTSISADGHKYGLAPAGSSWV  300 (491)
T ss_pred             ccchhhHHHHHHHHHHHhCCceeecccCccccccccccCcccccc---CCCCceeEeeccceeeeeecCcEEE
Confidence            9999999999999998 99999999999998652  1   12222   3456799999999999999999875

>PLN02651 cysteine desulfurase

Probab=99.84  E-value=3.9e-20  Score=183.73  Aligned_cols=167  Identities=16%  Similarity=0.147  Sum_probs=135.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .++.+++++.+++++|.+.                     ...+||+|+|+++..++..+.....               
T Consensus        42 ~~~~~~~r~~la~~~g~~~---------------------~~v~~t~~~t~a~~~~l~~~~~~~~---------------   85 (364)
T PLN02651         42 EDAVEKARAQVAALIGADP---------------------KEIIFTSGATESNNLAIKGVMHFYK---------------   85 (364)
T ss_pred             HHHHHHHHHHHHHHhCCCC---------------------CeEEEeCCHHHHHHHHHHHHHHhcc---------------
Confidence            3344788999999999862                     3589999999999998877654211               


Q ss_pred             cCceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      .++..|+++...|.|+.+.+.   ..+.+++.||+++++.+|+++|+++|+++      +.+|+++..++.+|.+.|+++
T Consensus        86 ~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~------t~lv~v~~~~n~tG~~~~l~~  159 (364)
T PLN02651         86 DKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPD------TALVSVMAVNNEIGVIQPVEE  159 (364)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCC------cEEEEEECCCCCceecccHHH
Confidence            134578999999999888753   34678999999888999999999999654      347888999999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|+++|+++|||+|++++.....     +..+ .+|++++++||| +.|.|+|++|
T Consensus       160 I~~~~~~~g~~~~vD~a~~~g~~~~~-----~~~~-~~D~~~~s~hK~-~gp~G~g~l~  211 (364)
T PLN02651        160 IGELCREKKVLFHTDAAQAVGKIPVD-----VDDL-GVDLMSISGHKI-YGPKGVGALY  211 (364)
T ss_pred             HHHHHHHcCCEEEEEcchhhCCcccC-----cccC-CCCEEEechhhh-CCCCceEEEE
Confidence            99999999999999999999865332     1222 369999999998 6899999986

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.84  E-value=2.7e-20  Score=204.53  Aligned_cols=178  Identities=13%  Similarity=0.060  Sum_probs=141.5

Q ss_pred             hhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCc
Q psy1596         154 IVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPE  233 (375)
Q Consensus       154 ~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~  233 (375)
                      ....|+.+++.++.+||++++|++.                      ..+...||+++++.+|+++|.....+ +     
T Consensus       535 e~~qG~l~~i~e~q~~l~eltG~d~----------------------~sl~~~~ga~ge~agL~a~r~~~~~~-G-----  586 (954)
T PRK05367        535 EQAAGYRELIDQLEAWLAEITGYDA----------------------VSLQPNAGAQGEYAGLLAIRAYHESR-G-----  586 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCC----------------------EEECccHHHHHHHHHHHHHHHHhhcc-C-----
Confidence            3456889999999999999999982                      22334577899999998887643211 0     


Q ss_pred             chhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         234 LEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       234 ~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                           ..++.+|++|+.+|.|+.+++.+.|.+++.||+|.+|++|+++|+++|+++.   ..+++|++|.++|..+..||
T Consensus       587 -----~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~---~~la~V~it~pst~G~~e~~  658 (954)
T PRK05367        587 -----EGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHA---DNLAAIMITYPSTHGVFEET  658 (954)
T ss_pred             -----CCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccC---CCeEEEEEEcCCCCeeecCC
Confidence                 0134589999999999999998889999999999899999999999997632   23778999999988444599


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      +++|+++|+++|+|+|||||++++......     .+--.||++++|+|||+++|+|+|
T Consensus       659 I~eI~~i~h~~G~~v~VDgA~~~al~~l~~-----pg~~GADi~~~s~HK~f~~P~G~G  712 (954)
T PRK05367        659 IREICEIVHEHGGQVYLDGANMNAQVGLAR-----PGDIGADVSHLNLHKTFCIPHGGG  712 (954)
T ss_pred             HHHHHHHHHHcCCEEEEECcChhhccCCCC-----hhhcCCCEEEecCcccCCCCcCCC
Confidence            999999999999999999999765332111     122258999999999999999977

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.83  E-value=7e-20  Score=199.02  Aligned_cols=176  Identities=12%  Similarity=0.033  Sum_probs=145.5

Q ss_pred             hhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         155 VILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       155 ~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .-.|..++..++..||++++|++                      ..++..++|+++++++|+++|.+...+  .     
T Consensus       524 ~sqG~lq~i~elq~~l~eltGmd----------------------~~Sl~p~aGA~gE~agL~aiR~y~~~r--g-----  574 (939)
T TIGR00461       524 QVEGYQELIAQLEKWLCSITGFD----------------------AISLQPNSGAQGEYAGLRVIRSYHESR--G-----  574 (939)
T ss_pred             HhHHHHHHHHHHHHHHHHHHCCC----------------------CcccCCchHHHHHHHHHHHHHHHHHhc--C-----
Confidence            34678899999999999999998                      246788899999999999998754211  1     


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-  313 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-  313 (375)
                          ..++.+|++|+.+|.++.+++...|.+++.||+|++|++|+++|+++|++.   +..+.+|++|.++| +|.+++ 
T Consensus       575 ----e~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~~  646 (939)
T TIGR00461       575 ----ENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEPT  646 (939)
T ss_pred             ----CCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhc---CCceEEEEEEeCCc-Cceeccc
Confidence                023568999999999999999888899999999999999999999999752   23477999999998 799977 


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      +++|+++|+++|.|++||||+..+......     .|-..||++++|+||++++|.|+|
T Consensus       647 I~eI~~iah~~G~~v~VDgAq~~al~~l~~-----Pg~~GaDi~~~s~HKtf~~P~G~G  700 (939)
T TIGR00461       647 IQHACDIVHSFGGQVYLDGANMNAQVGLTS-----PGDLGADVCHLNLHKTFCIPHGGG  700 (939)
T ss_pred             HHHHHHHHHHcCCEEEEEecChhhCCCCCC-----ccccCCCEEEecCCccCCCCCCCC
Confidence            999999999999999999999664332211     133358999999999999999884

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.81  E-value=5.5e-19  Score=178.00  Aligned_cols=164  Identities=15%  Similarity=0.149  Sum_probs=132.8

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      .+++++.+++++|.+.                     ...+||+|+|+++..++.+......               .++
T Consensus        49 ~~~~r~~la~~~g~~~---------------------~~v~~~~g~t~a~~~~l~~l~~~~~---------------~~g   92 (402)
T TIGR02006        49 VENARNQVAELIGADS---------------------REIVFTSGATESNNLAIKGIAHFYK---------------SKG   92 (402)
T ss_pred             HHHHHHHHHHHhCCCC---------------------CeEEEeCCHHHHHHHHHHHHHHhhc---------------CCC
Confidence            3678899999999762                     3589999999999988766543110               134


Q ss_pred             eEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      ..|+++..+|.|+..++.   ..+.+++.||+++++.+|+++|+++|++.      +.+|+++..++++|.+.|+++|++
T Consensus        93 ~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~------~~lv~v~~~~n~tG~~~~~~~I~~  166 (402)
T TIGR02006        93 NHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDD------TILVSIMHVNNEIGVIQDIAAIGE  166 (402)
T ss_pred             CEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCC------CEEEEEECCCcCceecccHHHHHH
Confidence            578999999999988763   24789999999989999999999998643      448888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|+++|+|+|||+|++.+.....     +... .+|++++++||++ .|.|+|++|
T Consensus       167 l~~~~g~~livD~a~a~g~~~~~-----~~~~-~~D~~~~s~~K~~-gp~G~G~l~  215 (402)
T TIGR02006       167 ICRERKVFFHVDAAQSVGKIPIN-----VNEL-KVDLMSISGHKIY-GPKGIGALY  215 (402)
T ss_pred             HHHHcCCEEEEEcchhcCCcccC-----cccc-CCCEEEEehhhhc-CCCceEEEE
Confidence            99999999999999998865321     1121 4799999999965 699999985

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>KOG1549|consensus

Probab=99.81  E-value=3.1e-19  Score=177.84  Aligned_cols=164  Identities=20%  Similarity=0.164  Sum_probs=134.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++.+|+|+|.+.                     .+.+||+|+||||.+++..--.....              ..+-
T Consensus        88 E~aR~~VAklInAd~---------------------~dIiFts~ATEs~Nlvl~~v~~~~~~--------------~~~k  132 (428)
T KOG1549|consen   88 EAAREQVAKLINADP---------------------SDIVFTSGATESNNLVLKGVARFFGD--------------KTKK  132 (428)
T ss_pred             HHHHHHHHHHhCCCC---------------------CcEEEeCCchHHHHHHHHHhhccccc--------------cccc
Confidence            688999999999982                     23999999999998887653221100              0122


Q ss_pred             EEEecCCCchHHHHHHH-H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL-I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~-l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|++.+.+|.|+.++++ +  -|..++.||++++|-.|.+.|+++|+.++      .+|.+.+-+++.|.+.|++||+++
T Consensus       133 ~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T------~lv~I~~Vnn~~gv~~Pv~EI~~i  206 (428)
T KOG1549|consen  133 HIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKT------RLVSIMHVNNEIGVLQPVKEIVKI  206 (428)
T ss_pred             eEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCc------eEEEEEecccCccccccHHHHHHH
Confidence            79999999999999985 2  46899999999999999999999999864      488999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++++.+|+|+||+.+..... .+.    + .+|.+++++|||++.|- +|+||
T Consensus       207 cr~~~v~v~~DaAQavG~i~vD-V~e----l-n~D~~s~s~HK~ygp~~-iGaLY  254 (428)
T KOG1549|consen  207 CREEGVQVHVDAAQAVGKIPVD-VQE----L-NADFLSISAHKIYGPPG-IGALY  254 (428)
T ss_pred             hCcCCcEEEeehhhhcCCcccc-HHH----c-CchheeeecccccCCCc-ceEEE
Confidence            9999999999999999976432 222    2 46999999999987554 99987

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.80  E-value=2.8e-18  Score=172.24  Aligned_cols=166  Identities=11%  Similarity=0.010  Sum_probs=136.6

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+.+++++|.+                       ..+||+|||++|..++.+...                   +
T Consensus        64 ~~~~l~~~lA~~~g~~-----------------------~~~~~~g~t~a~~~al~~l~~-------------------~  101 (387)
T PRK09331         64 PIADFHEDLAEFLGMD-----------------------EARVTHGAREGKFAVMHSLCK-------------------K  101 (387)
T ss_pred             HHHHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHhcC-------------------C
Confidence            3488899999999986                       258999999999888876532                   3


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhh-cCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKK-KHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~-~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      +..|+++..+|+|...++.+.|.+++.+|+  ++++.+|+++|+++|++..+ .+..+.+|+.+.+++.+|.+.|+++|+
T Consensus       102 gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~  181 (387)
T PRK09331        102 GDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVA  181 (387)
T ss_pred             CCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHH
Confidence            457899999999999998888899999998  67899999999999976421 123467888899999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|+++|||+||+.+.+..+- +.  .   .+|.++.++|||++.|.++|+++
T Consensus       182 ~la~~~g~~livD~a~~~g~~~~~~-~~--~---g~D~~~~s~~K~l~~~~~~G~l~  232 (387)
T PRK09331        182 KVAHEYGIPFLLNGAYTVGRMPVDG-KK--L---GADFIVGSGHKSMAASAPSGVLA  232 (387)
T ss_pred             HHHHHcCCEEEEECCcccCCcCCCH-HH--c---CCCEEEeeCcccccCCCCEEEEE
Confidence            9999999999999999987642221 11  1   36999999999999999999874

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.80  E-value=1.6e-18  Score=172.64  Aligned_cols=165  Identities=19%  Similarity=0.175  Sum_probs=133.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ...+++++++++++|.+.                     ...+||+|||+++..++.+.....                .
T Consensus        42 ~~~~~~r~~la~~~g~~~---------------------~~i~~t~~~t~a~~~al~~~~~~~----------------~   84 (379)
T TIGR03402        42 KAVEEAREQVAKLLGAEP---------------------DEIIFTSGGTESDNTAIKSALAAQ----------------P   84 (379)
T ss_pred             HHHHHHHHHHHHHhCCCC---------------------CeEEEeCcHHHHHHHHHHHHHHhc----------------C
Confidence            334788999999999862                     358999999999999887664310                0


Q ss_pred             CceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      ++.+|+++..+|.++...+.   ..|.+++.||.+++|.+|+++|+++|+++      +.+|+.+..++.+|.+.|+++|
T Consensus        85 ~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~------~~lv~i~~~~n~tG~~~~~~~I  158 (379)
T TIGR03402        85 EKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDD------TALVSVMWANNETGTIFPIEEI  158 (379)
T ss_pred             CCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCC------cEEEEEEcccCCeeecccHHHH
Confidence            23478899999999887653   25789999999888999999999998653      4578888899999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|+++|+|++++.+....+     +.. ..+|++++++|| ++.|.|+|++|
T Consensus       159 ~~l~~~~g~~vivD~~~~~g~~~~~-----~~~-~~~D~~~~s~~K-~~gp~G~g~l~  209 (379)
T TIGR03402       159 GEIAKERGALFHTDAVQAVGKIPID-----LKE-MNIDMLSLSGHK-LHGPKGVGALY  209 (379)
T ss_pred             HHHHHHcCCEEEEECcccccccccC-----ccc-CCCCEEEEcHHH-cCCCCceEEEE
Confidence            9999999999999999998754221     111 147999999999 67899999986

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.79  E-value=2.4e-18  Score=170.59  Aligned_cols=164  Identities=15%  Similarity=0.175  Sum_probs=132.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++++++++++|.+                    .....+||+|+|+++..++.+...                   
T Consensus        44 ~~~~~~~~~la~~~~~~--------------------~~~~v~~~~g~t~al~~~~~~~~~-------------------   84 (376)
T TIGR01977        44 REVEETRQLLAKLFNAP--------------------SSAHVVFTNNATTALNIALKGLLK-------------------   84 (376)
T ss_pred             HHHHHHHHHHHHHhCcC--------------------CCCeEEEeCCHHHHHHHHHHhccC-------------------
Confidence            34478899999999987                    233689999999998877654211                   


Q ss_pred             CceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      ++..|+++..+|.++..+.    ...+.+++.|+.++++.+|+++|+++++++      +.+|+.+.++|++|.+.|+++
T Consensus        85 ~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~  158 (376)
T TIGR01977        85 EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEE  158 (376)
T ss_pred             CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHH
Confidence            2457889999999887653    344789999999888999999999998543      558889999999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |.++|+++|++++||+|++.+...... .     -..+|++++++|||++.|.|+|++|
T Consensus       159 i~~l~~~~~~~livD~a~~~g~~~~~~-~-----~~~~D~~~~s~~K~l~~p~g~g~l~  211 (376)
T TIGR01977       159 IGELAQENGIFFILDAAQTAGVIPIDM-T-----ELAIDMLAFTGHKGLLGPQGTGGLY  211 (376)
T ss_pred             HHHHHHHcCCEEEEEhhhccCccCCCc-h-----hcCCCEEEecccccccCCCCceEEE
Confidence            999999999999999999988653221 1     1247999999999999999999874

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK14012 cysteine desulfurase; Provisional

Probab=99.79  E-value=2.5e-18  Score=173.17  Aligned_cols=163  Identities=17%  Similarity=0.179  Sum_probs=131.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++++++++|.+.                     ..++||+|||+++.+++.+......               .++.
T Consensus        52 ~~~r~~ia~~~g~~~---------------------~~v~~~~g~t~al~~~l~~l~~~~~---------------~~gd   95 (404)
T PRK14012         52 DIARNQIADLIGADP---------------------REIVFTSGATESDNLAIKGAAHFYQ---------------KKGK   95 (404)
T ss_pred             HHHHHHHHHHcCcCc---------------------CeEEEeCCHHHHHHHHHHHHHHhhc---------------CCCC
Confidence            678899999999862                     3589999999999988876543210               1345


Q ss_pred             EEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|+++..+|.|+..++.   ..|.+++.|+++++|.+|+++|+++|+++      +.+|+++..++++|.+.|+++|.++
T Consensus        96 ~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~------t~lv~~~~~~n~tG~~~~~~~I~~l  169 (404)
T PRK14012         96 HIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDD------TILVSIMHVNNEIGVIQDIAAIGEI  169 (404)
T ss_pred             EEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCC------CEEEEEECcCCCccchhhHHHHHHH
Confidence            78999999999988764   24789999999989999999999999654      3488899999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|+++|+|+|++.+....+     +.. ..+|++++++||+ +.|.|+|++|
T Consensus       170 a~~~g~~vivD~a~~~g~~~~~-----~~~-~~~D~~~~s~~K~-~gp~g~G~l~  217 (404)
T PRK14012        170 CRERGIIFHVDAAQSVGKVPID-----LSK-LKVDLMSFSAHKI-YGPKGIGALY  217 (404)
T ss_pred             HHHcCCEEEEEcchhcCCcccC-----ccc-CCCCEEEEehhhc-cCCCceEEEE
Confidence            9999999999999998765322     111 1479999999995 5688999875

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.79  E-value=3.1e-18  Score=169.05  Aligned_cols=167  Identities=18%  Similarity=0.175  Sum_probs=133.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .+.+++++++++++|.+.                     ...+||+|+|+++..++.+.......              .
T Consensus        42 ~~~~~~r~~la~~~g~~~---------------------~~v~~~~g~t~a~~~~l~~l~~~~~~--------------~   86 (353)
T TIGR03235        42 KAVERARKQVAEALGADT---------------------EEVIFTSGATESNNLAILGLARAGEQ--------------K   86 (353)
T ss_pred             HHHHHHHHHHHHHhCCCC---------------------CeEEEeCCHHHHHHHHHHHHHHhccc--------------C
Confidence            445789999999999872                     35899999999998887665432100              0


Q ss_pred             CceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      .+..|+++...|.|+..+..   ..|.+++.||.++++.+|+++|++++++.      +.+|+++.+++++|.+.|+++|
T Consensus        87 g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I  160 (353)
T TIGR03235        87 GKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPD------TLLVSIMHVNNETGSIQPIREI  160 (353)
T ss_pred             CCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCC------CEEEEEEcccCCceeccCHHHH
Confidence            12579999999999988753   24789999999888999999999998542      4588889999999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|+|+|||+|++.+....+     +.. ..+|++++++||| +.|.|+|++|
T Consensus       161 ~~l~~~~~~~~ivD~a~~~g~~~~~-----~~~-~~~D~~~~s~~K~-~gp~g~g~l~  211 (353)
T TIGR03235       161 AEVLEAHEAFFHVDAAQVVGKITVD-----LSA-DRIDLISCSGHKI-YGPKGIGALV  211 (353)
T ss_pred             HHHHHHcCCEEEEEchhhcCCcccc-----ccc-cCCCEEEeehhhc-CCCCceEEEE
Confidence            9999999999999999998865322     111 1479999999999 5799999875

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.78  E-value=7.5e-18  Score=167.04  Aligned_cols=166  Identities=16%  Similarity=0.128  Sum_probs=131.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      +...++++++++++|.+                    +....++|+|+|+++..++.+.....                .
T Consensus        43 ~~~~~~~~~la~~~~~~--------------------~~~~v~~~~g~t~a~~~~~~~l~~~~----------------~   86 (373)
T cd06453          43 DAYEAAREKVARFINAP--------------------SPDEIIFTRNTTEAINLVAYGLGRAN----------------K   86 (373)
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCCeEEEeCCHHHHHHHHHHHhhhcC----------------C
Confidence            33478889999999987                    33468899999999888776654310                0


Q ss_pred             CceEEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      ++..|++++.+|.+...+    ++..+.+++.|+.++++++|+++|++++.++      +.+|+.+.++|++|.++|+++
T Consensus        87 ~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~  160 (373)
T cd06453          87 PGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTER------TKLVAVTHVSNVLGTINPVKE  160 (373)
T ss_pred             CCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCC------ceEEEEeCcccccCCcCCHHH
Confidence            234788999999996543    3355789999999988999999999999653      447888999999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |.++|+++|+|||+|+||+.+....+ .    ..+ .+|++++++|||++. .++|+++
T Consensus       161 i~~~~~~~~~~li~D~a~~~~~~~~~-~----~~~-~~d~~~~s~~K~~~~-~g~g~~~  212 (373)
T cd06453         161 IGEIAHEAGVPVLVDGAQSAGHMPVD-V----QDL-GCDFLAFSGHKMLGP-TGIGVLY  212 (373)
T ss_pred             HHHHHHHcCCEEEEEhhhhcCceeee-c----ccc-CCCEEEeccccccCC-CCcEEEE
Confidence            99999999999999999987754221 1    111 469999999999876 7888764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.77  E-value=7.5e-18  Score=174.16  Aligned_cols=172  Identities=16%  Similarity=0.089  Sum_probs=133.7

Q ss_pred             hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      ..|+.+++.++.+|+++++|++.                      ..++.++|+.+++.++.++|.....+         
T Consensus       108 sqG~lel~~~~~~~la~l~G~~~----------------------~~l~~~~GA~a~~~~l~~~r~~~~~~---------  156 (481)
T PRK04366        108 VQGALELMYELQEWLKEITGMDA----------------------VTLQPAAGAHGELTGLLMIRAYHEAR---------  156 (481)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCc----------------------eEEEeCcHHHHHHHHHHHHHHHhhcc---------
Confidence            45777888999999999999972                      24666788888887776555422110         


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-ccH
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DNL  314 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dpl  314 (375)
                        +..++..|++++..|.++.+.+...|.+++.||++++|.+|+++|+++|.+++      .+|+++.++ .+|.+ +|+
T Consensus       157 --Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t------~~V~v~~Pn-~tG~~~~dl  227 (481)
T PRK04366        157 --GDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDT------AALMLTNPN-TLGLFERNI  227 (481)
T ss_pred             --CcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccCC------eEEEEeCCC-CccccchHH
Confidence              00123478999999999999998889999999998889999999999997543      367778877 78988 699


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      ++|+++|+++|.|+|||+|+..+.+-  ....   +-..||++++|+||||++|+++|
T Consensus       228 ~eI~~~a~~~gal~iVD~a~~~~~~g--~~~~---~~~GaD~~~~~~hK~l~~P~g~G  280 (481)
T PRK04366        228 LEIAEIVHEAGGLLYYDGANLNAILG--KARP---GDMGFDVVHLNLHKTFSTPHGGG  280 (481)
T ss_pred             HHHHHHHHHcCCEEEEEecChhhhcc--cCCc---cccCCCEEEEechhhcCCCCCCC
Confidence            99999999999999999999755221  1111   11247999999999999999886

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.76  E-value=5.2e-17  Score=161.50  Aligned_cols=168  Identities=18%  Similarity=0.125  Sum_probs=137.2

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..++-+++.+.+++++|.+                    .....+|++|+|+++..++...+...               
T Consensus        41 ~~~~~~~~r~~la~~lg~~--------------------~~~~v~~~~~~t~a~~~~~~~l~~~~---------------   85 (371)
T PF00266_consen   41 FAEILEEAREALAKLLGAP--------------------PDEEVVFTSNGTEALNAVASSLLNPL---------------   85 (371)
T ss_dssp             HHHHHHHHHHHHHHHHTSS--------------------TTEEEEEESSHHHHHHHHHHHHHHHG---------------
T ss_pred             hhHHHHHHHHHHHHhcCCc--------------------cccccccccccchhhhhhhhcccccc---------------
Confidence            3445578999999999998                    32468999999998888777665421               


Q ss_pred             hcCceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         239 INSRLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                       .++..|+++...|+|...++    ...+.+++.||.+.++.+|+++++++|.++      +.+|+.++.++.+|.+.|+
T Consensus        86 -~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~------~~lv~~~~~~~~tG~~~pi  158 (371)
T PF00266_consen   86 -KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPD------TRLVSISHVENSTGVRNPI  158 (371)
T ss_dssp             -TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTT------ESEEEEESBETTTTBBSSH
T ss_pred             -ccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccc------cceEEeecccccccEEeee
Confidence             13457999999999999654    246889999999889999999999999754      4489999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|+++|++++||++++.+.+..+     +..+ .+|.+++++|| ++.|.|+|++|
T Consensus       159 ~~I~~~~~~~~~~~~vD~~~~~g~~~id-----~~~~-~~D~~~~s~~K-l~gp~G~g~l~  212 (371)
T PF00266_consen  159 EEIAKLAHEYGALLVVDAAQSAGCVPID-----LDEL-GADFLVFSSHK-LGGPPGLGFLY  212 (371)
T ss_dssp             HHHHHHHHHTTSEEEEE-TTTTTTSS-------TTTT-TESEEEEESTS-TTSSSTEEEEE
T ss_pred             ceehhhhhccCCceeEechhcccccccc-----cccc-ccceeeecccc-cCCCCchhhhe
Confidence            9999999999999999999999876432     1222 47999999999 88899999986

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.76  E-value=4.3e-17  Score=161.65  Aligned_cols=164  Identities=12%  Similarity=0.040  Sum_probs=132.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..++|+|||+++..++.+...                   ++.
T Consensus        47 ~~l~~~la~~~g~~-----------------------~i~~~~g~t~al~~~l~~~~~-------------------~gd   84 (361)
T cd06452          47 KDFHHDLAEFLGMD-----------------------EARVTPGAREGKFAVMHSLCE-------------------KGD   84 (361)
T ss_pred             HHHHHHHHHHcCCc-----------------------eEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence            78889999999885                       378999999998888765422                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCC--CcCHHHHHHHHHHhhhc-CCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKL--SLRGDKLIEAIERDKKK-HLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g--~md~e~Le~aI~~~~~~-g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|+++..+|++...++...|.+++.||.+.++  .+|+++|++++++..++ +..+.+|+++.+++.+|.++|+++|+++
T Consensus        85 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~  164 (361)
T cd06452          85 WVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKV  164 (361)
T ss_pred             EEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHH
Confidence            78899999999998888888999999987654  89999999999753321 2236688889999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|+++|+|+||+.+....+. ..  .   .+|.++.++||+++.|.++|+++
T Consensus       165 ~~~~~~~vivD~a~~~g~~~~~~-~~--~---~~d~~~~s~~K~l~~~~~~G~l~  213 (361)
T cd06452         165 CHEYGVPLLLNGAYTVGRMPVSG-KE--L---GADFIVGSGHKSMAASAPIGVLA  213 (361)
T ss_pred             HHHcCCeEEEECCcccCCcCCCH-HH--c---CCCEEEecCCccccCCCCeEEEE
Confidence            99999999999999976531111 11  1   36999999999999888888763

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.75  E-value=2.6e-17  Score=162.13  Aligned_cols=167  Identities=12%  Similarity=-0.066  Sum_probs=131.2

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..++.+++++++++++|.+                    .....++|+|||+++..++.+...                 
T Consensus        30 ~~~~~~~~~~~la~~~g~~--------------------~~~~~~~~~~~t~al~~~~~~~~~-----------------   72 (356)
T cd06451          30 FLALMDEILEGLRYVFQTE--------------------NGLTFLLSGSGTGAMEAALSNLLE-----------------   72 (356)
T ss_pred             HHHHHHHHHHHHHHHhcCC--------------------CCCEEEEecCcHHHHHHHHHHhCC-----------------
Confidence            4455578999999999986                    233478999999998888765421                 


Q ss_pred             hcCceEEEecCCCchHH--HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         239 INSRLVAYCSDQAHSSV--EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv--~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                        ++..|+++...|++.  ...++..+.+++.+|.++++.+|+++|++++++.     .|.+|+++.+++.+|.+.|+++
T Consensus        73 --~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~~~~  145 (356)
T cd06451          73 --PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQH-----DIKAVTLTHNETSTGVLNPLEG  145 (356)
T ss_pred             --CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhcc-----CCCEEEEeccCCCcccccCHHH
Confidence              234677888888873  4555667789999999888899999999999751     1457888888999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|+++|+++++|++|+.+....+-     .. ..+|.++.++|||++.|.|+|+++
T Consensus       146 i~~~a~~~~~~li~D~~~~~g~~~~~~-----~~-~~~d~~~~s~~K~l~~p~g~G~l~  198 (356)
T cd06451         146 IGALAKKHDALLIVDAVSSLGGEPFRM-----DE-WGVDVAYTGSQKALGAPPGLGPIA  198 (356)
T ss_pred             HHHHHHhcCCEEEEeeehhccCccccc-----cc-cCccEEEecCchhccCCCCcceeE
Confidence            999999999999999999866432111     01 136999999999999999999874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.75  E-value=2.6e-17  Score=165.19  Aligned_cols=164  Identities=16%  Similarity=0.108  Sum_probs=129.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++.+++++|.+                    .+...+||+|+|+++..++.+.....               ..++.
T Consensus        65 ~~~r~~ia~~~~~~--------------------~~~~v~~~~g~t~~l~~~~~~~~~~~---------------~~~g~  109 (403)
T TIGR01979        65 EAVREKVAKFINAA--------------------SDEEIVFTRGTTESINLVAYSWGDSN---------------LKAGD  109 (403)
T ss_pred             HHHHHHHHHHhCcC--------------------CCCeEEEeCCHHHHHHHHHHHhhhhc---------------CCCCC
Confidence            67889999999987                    33468999999999776665432210               01345


Q ss_pred             EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++.+|.|...    .+...|.+++.||++++|.+|+++|++++.++      +.+|+.+.+++.+|.+.|+++|++
T Consensus       110 ~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~------~~lv~~~~~~~~tG~~~~~~~i~~  183 (403)
T TIGR01979       110 EIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEK------TKLVAITHVSNVLGTVNPVEEIAK  183 (403)
T ss_pred             EEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccC------CeEEEEEcccccccccCCHHHHHH
Confidence            79999999988653    34456789999999989999999999998653      558889999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|+++|+++|||+||+.+.... ..    ... .+|.+++++||++ .|.|+|++|
T Consensus       184 ~~~~~~~~~ivD~a~~~g~~~~-~~----~~~-~~d~~~~s~~K~~-gp~G~g~l~  232 (403)
T TIGR01979       184 LAHQVGAKVLVDGAQAVPHMPV-DV----QAL-DCDFYVFSGHKMY-GPTGIGVLY  232 (403)
T ss_pred             HHHHcCCEEEEEchhhcCcccc-Cc----ccc-CCCEEEEeccccc-CCCCceEEE
Confidence            9999999999999998875421 11    111 3699999999975 588999875

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.75  E-value=2.7e-17  Score=159.66  Aligned_cols=188  Identities=19%  Similarity=0.158  Sum_probs=142.4

Q ss_pred             hhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHH
Q psy1596         132 GKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASES  211 (375)
Q Consensus       132 ~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~A  211 (375)
                      +++.+.+...|.-+. .|.+|+.+        .++.+.++++||.+                       ..+|+++||+|
T Consensus         9 ~~m~~a~~~a~~gd~-~Yg~D~~~--------~~l~~~i~~l~g~e-----------------------~a~f~~sGT~A   56 (290)
T PF01212_consen    9 PAMLEAMAAANVGDD-AYGEDPTT--------ARLEERIAELFGKE-----------------------AALFVPSGTMA   56 (290)
T ss_dssp             HHEEHHHHHTTSB-C-CTTSSHHH--------HHHHHHHHHHHTSS-----------------------EEEEESSHHHH
T ss_pred             HHHHHHHHccccCCc-ccCCChhH--------HHHHHHHHHHcCCC-----------------------EEEEeCCCChH
Confidence            456666655565444 78888888        99999999999998                       25899999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHH--H-HHcCCeEEEEecCCCCCcCHHHHHHHHHH
Q psy1596         212 TLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKA--G-LIGLVKMRYIESDDKLSLRGDKLIEAIER  288 (375)
Q Consensus       212 nl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~ka--a-~lg~~~v~~Vp~d~~g~md~e~Le~aI~~  288 (375)
                      |.+++.+...                   +...|++.+.+|..+.+.  . .+.|.+++.|+.+++|+||+++|++++++
T Consensus        57 n~~al~~~~~-------------------~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~  117 (290)
T PF01212_consen   57 NQLALRAHLR-------------------PGESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEE  117 (290)
T ss_dssp             HHHHHHHHHH-------------------TTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHH
T ss_pred             HHHHHHHHHh-------------------cCCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhh
Confidence            9999988763                   234789999999988874  2 57899999999877799999999999988


Q ss_pred             hhhcCCccEEEEEEcCCCCc-ccc---ccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCc
Q psy1596         289 DKKKHLIPFFVCGTLGTTGA-CAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPS  362 (375)
Q Consensus       289 ~~~~g~~p~~Vv~t~GtT~t-Gav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~H  362 (375)
                      ......+|.+|..+..++.. |.+   +.|++|.++|+++|+.+|+|||.-+.+...  ...+...   ..+|++++++.
T Consensus       118 ~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~t  194 (290)
T PF01212_consen  118 HGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGT  194 (290)
T ss_dssp             HTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETT
T ss_pred             ccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEE
Confidence            55433446666666655443 654   788899999999999999999987665422  1234444   45799999999


Q ss_pred             ccCCCCCccee
Q psy1596         363 KWLMVHFDCTA  373 (375)
Q Consensus       363 K~l~~P~~~g~  373 (375)
                      |.+++|.|.=+
T Consensus       195 K~~g~~~Gavl  205 (290)
T PF01212_consen  195 KNGGAPGGAVL  205 (290)
T ss_dssp             STT-SSSEEEE
T ss_pred             cccccccceEE
Confidence            99999987543

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PRK02948 cysteine desulfurase; Provisional

Probab=99.74  E-value=3.7e-17  Score=162.96  Aligned_cols=166  Identities=13%  Similarity=0.058  Sum_probs=132.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .+.+++++++++++|.+.                     ...+||+|+|+++..++.+......               .
T Consensus        43 ~~~~~~r~~la~~~g~~~---------------------~~i~~~~g~t~a~~~~~~~~~~~~~---------------~   86 (381)
T PRK02948         43 SLLQVCRKTFAEMIGGEE---------------------QGIYFTSGGTESNYLAIQSLLNALP---------------Q   86 (381)
T ss_pred             HHHHHHHHHHHHHhCCCC---------------------CeEEEeCcHHHHHHHHHHHHHHhcc---------------C
Confidence            445788999999999762                     3578999999999988876643210               1


Q ss_pred             CceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      ++.+|+++...|.|+...+.   ..|.+++.||++++|.+|+++|++++++.      +.+|+.+.++++||.+.|+++|
T Consensus        87 ~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I  160 (381)
T PRK02948         87 NKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPD------TVLASIQHANSEIGTIQPIAEI  160 (381)
T ss_pred             CCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCC------CEEEEEECCcCCcEeehhHHHH
Confidence            23578899999999888753   45789999999888999999999988643      4588999999999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|+++|||++++.+.....     +.. ..+|.+++++||++ .|.|+|++|
T Consensus       161 ~~l~~~~~~~vivD~~~~~g~~~~~-----~~~-~~~d~~~~s~~K~~-gp~G~G~l~  211 (381)
T PRK02948        161 GALLKKYNVLFHSDCVQTFGKLPID-----VFE-MGIDSLSVSAHKIY-GPKGVGAVY  211 (381)
T ss_pred             HHHHHHcCCEEEEEChhhccccccC-----ccc-CCCCEEEecHHhcC-CCCcEEEEE
Confidence            9999999999999999887653211     111 14799999999975 599999874

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.74  E-value=2.1e-17  Score=159.97  Aligned_cols=164  Identities=14%  Similarity=0.017  Sum_probs=127.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+.                      ..++|+|+|++|..++.+...                   ++.
T Consensus        62 ~~~~~~~A~~~ga~~----------------------~~~~~~Gst~a~~~~l~al~~-------------------~gd  100 (294)
T cd00615          62 KEAQELAARAFGAKH----------------------TFFLVNGTSSSNKAVILAVCG-------------------PGD  100 (294)
T ss_pred             HHHHHHHHHHhCCCC----------------------EEEEcCcHHHHHHHHHHHcCC-------------------CCC
Confidence            788899999999761                      234588889999888776532                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC--C----CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD--K----LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~----g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      .|+++..+|.|+..++.+.+.+++.++++.  +    +.+|+++|++++++..    .+.+|+.+.+ |.+|.+.|+++|
T Consensus       101 ~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I  175 (294)
T cd00615         101 KILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKI  175 (294)
T ss_pred             EEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHH
Confidence            899999999999999988888888887642  2    4799999999997532    2557777877 679999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +++|+++|++++||+||++...+.+.+...... ..+|.++.++||++..|.++|++
T Consensus       176 ~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~-~~~div~~S~hK~l~g~~~~~~l  231 (294)
T cd00615         176 VEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAM-AGADIVVQSTHKTLPALTQGSMI  231 (294)
T ss_pred             HHHHHhcCCeEEEECcchhhhccCcccCcchhh-cCCcEEEEchhcccchHhHHHHH
Confidence            999999999999999999865444432211111 25799999999999887777664

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.74  E-value=3.5e-17  Score=179.87  Aligned_cols=171  Identities=16%  Similarity=0.093  Sum_probs=139.7

Q ss_pred             hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChH----HHHHHHHHHHHHHHHHHhhccC
Q psy1596         156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTAS----ESTLICLLAGRTEAIRKYQQSH  231 (375)
Q Consensus       156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT----~Anl~AL~aar~~~~~~~~~~~  231 (375)
                      ..|..++-.++.+||++++|++                       ..+||+++|    +++++++.+..+..    +   
T Consensus       563 ~~g~~~~~~~~r~~la~i~g~~-----------------------~v~f~pnaga~ge~a~~~vi~~~~~~~----G---  612 (993)
T PLN02414        563 AQGYQEMFEDLGDLLCEITGFD-----------------------SFSLQPNAGAAGEYAGLMVIRAYHLSR----G---  612 (993)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCC-----------------------eEEEcCCCcHHHHHHHHHHHHHHHhcc----C---
Confidence            4688888899999999999997                       379999999    88887777653210    0   


Q ss_pred             CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                             ...+.+|+++..+|.++.+++.+.|.+++.||+|++|.+|+++|+++|++.++   ...+|++|.++|..|.+
T Consensus       613 -------d~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e  682 (993)
T PLN02414        613 -------DHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYE  682 (993)
T ss_pred             -------CCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCC---CeEEEEEECCCcccccc
Confidence                   01345899999999999999988899999999999999999999999985332   24589999999999999


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                      +||++|+++|+++|+.++||||+..+......     .+--.+|.++++.|||++.|.|.
T Consensus       683 ~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~-----p~~~GaD~~~~s~HK~f~~P~G~  737 (993)
T PLN02414        683 EGIDEICDIIHDNGGQVYMDGANMNAQVGLTS-----PGFIGADVCHLNLHKTFCIPHGG  737 (993)
T ss_pred             chHHHHHHHHHHcCCEEEEEecCHHhccCcCC-----ccccCCCEEEecCCccCCcCccc
Confidence            99999999999999999999999776422111     01124799999999999999983

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.74  E-value=1.7e-17  Score=161.71  Aligned_cols=193  Identities=17%  Similarity=0.228  Sum_probs=151.4

Q ss_pred             chhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC
Q psy1596         127 FQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT  206 (375)
Q Consensus       127 ~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts  206 (375)
                      .....+++.+.+...|.+....|+.|+.+        +++.+++++++|..                       .++|++
T Consensus         9 ~~g~~~~m~eam~~a~~~~~~~YG~D~~~--------~~~e~~~ae~~g~~-----------------------a~~Fv~   57 (342)
T COG2008           9 VAGPTPEMREALAAANAVGDDVYGEDPTT--------NALEQRIAELFGKE-----------------------AALFVP   57 (342)
T ss_pred             cCCCCHHHHHHHHhccccCCCCCCCCHHH--------HHHHHHHHHHhCCc-----------------------eEEEec
Confidence            44556788889999998888899999888        99999999999874                       489999


Q ss_pred             ChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH---HHcCCeEEEEecCCCCCcCHHHHH
Q psy1596         207 TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG---LIGLVKMRYIESDDKLSLRGDKLI  283 (375)
Q Consensus       207 GGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa---~lg~~~v~~Vp~d~~g~md~e~Le  283 (375)
                      +||+||.++|.+..+                   +...|+|.+.+|....++.   .++++..+.+...++|+|++++|+
T Consensus        58 sGT~aN~lal~~~~~-------------------~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~  118 (342)
T COG2008          58 SGTQANQLALAAHCQ-------------------PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVE  118 (342)
T ss_pred             CccHHHHHHHHHhcC-------------------CCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHH
Confidence            999999999988754                   2347999999999998853   356666666655689999999999


Q ss_pred             HHHHHhh-hcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEE
Q psy1596         284 EAIERDK-KKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSI  357 (375)
Q Consensus       284 ~aI~~~~-~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi  357 (375)
                      .+|..+. ....+|.++..|.-| +.|.|   |.|++|.++|+++|+.||+|||.-+.++..  +..+.+..   .+||+
T Consensus       119 ~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~---~~D~v  194 (342)
T COG2008         119 AAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKS---YVDSV  194 (342)
T ss_pred             HhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHh---hCCEE
Confidence            9998643 334456666666554 77987   667777889999999999999987776543  22233333   46999


Q ss_pred             EEcCcccCCCCCccee
Q psy1596         358 AFNPSKWLMVHFDCTA  373 (375)
Q Consensus       358 ~~d~HK~l~~P~~~g~  373 (375)
                      +|.+.|.|+.|.++=+
T Consensus       195 ~~~~tK~g~~~~gAiv  210 (342)
T COG2008         195 SFCLTKGGGAPVGAIV  210 (342)
T ss_pred             EEecccCCcceeeeEE
Confidence            9999999999887533

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.74  E-value=5.4e-17  Score=162.00  Aligned_cols=150  Identities=17%  Similarity=0.219  Sum_probs=118.3

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCC
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLS  276 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~  276 (375)
                      ...+||+|+|+++..++.+.......  +           .++..|+++..+|.|+..++.   ..|.+++.||++++|.
T Consensus        61 ~~i~~t~g~teal~~~~~~~~~~~~~--~-----------~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~  127 (382)
T TIGR03403        61 DDIIITSCATESNNWVLKGVYFDEIL--K-----------GGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGT  127 (382)
T ss_pred             CeEEEeCCHHHHHHHHHHHHHHhhcc--c-----------CCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCC
Confidence            46899999999998887755321000  0           013468999999999988753   3578999999998899


Q ss_pred             cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccE
Q psy1596         277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANS  356 (375)
Q Consensus       277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDS  356 (375)
                      +|+++|++++++.      +.+|+++.+++++|.+.|+++|.++|+++|+++|||++++.+....+ ..  .   ..+|+
T Consensus       128 ~d~~~l~~~i~~~------t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~-~~--~---~~~D~  195 (382)
T TIGR03403       128 ITAEQVREAITEK------TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVD-VQ--K---AGVDF  195 (382)
T ss_pred             CCHHHHHHhcccC------CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccC-cc--c---cCCCE
Confidence            9999999998654      34788899999999999999999999999999999999998754321 11  1   24799


Q ss_pred             EEEcCcccCCCCCcceeeC
Q psy1596         357 IAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       357 i~~d~HK~l~~P~~~g~l~  375 (375)
                      +++++||| +.|.|+|++|
T Consensus       196 ~~~s~~K~-~gp~G~g~l~  213 (382)
T TIGR03403       196 LSFSAHKF-HGPKGVGGLY  213 (382)
T ss_pred             EEEcchhh-CCCCceEEEE
Confidence            99999998 5699999875

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.74  E-value=5.4e-17  Score=165.59  Aligned_cols=161  Identities=12%  Similarity=0.021  Sum_probs=118.2

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |..+...+...|+++++|++.                     ..+++|+|||+++..+++ ++..               
T Consensus       109 g~~~~~~e~~~~la~l~g~~~---------------------~~v~~~~g~t~~~~~~~~-a~~~---------------  151 (447)
T PRK00451        109 GTLQAIFEYQTMICELTGMDV---------------------ANASMYDGATALAEAALM-AVRI---------------  151 (447)
T ss_pred             HHHHHHHHHHHHHHHHhCCCc---------------------ceEEecCcHHHHHHHHHH-HHHh---------------
Confidence            344444677789999999982                     247899999985544443 3321               


Q ss_pred             hhcCceEEEecCCCchHHHHHHHH----cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLI----GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~l----g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                        .++..|++++.+|.++.+++..    .|.+++.||++++ ++|+++|+++|+++      +.+|+++.+ |.+|.++|
T Consensus       152 --~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~------t~~v~l~~p-n~tG~v~~  221 (447)
T PRK00451        152 --TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDDD------TAAVVVQYP-NFFGVIED  221 (447)
T ss_pred             --cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCCC------eEEEEEECC-CCCCeeCC
Confidence              0234788999999999998753    5789999999877 99999999999654      346777777 78999999


Q ss_pred             HHHHHHHHHhcCCEEEE--ecccccCcccchhhhhhhcCCCcccEEEEcCccc-----CCCCCcceee
Q psy1596         314 LEELGPICEKEGLWLHV--DAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKW-----LMVHFDCTAM  374 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHV--DaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~-----l~~P~~~g~l  374 (375)
                      +++|+++|+++|+|++|  |... .+.+..+       +--.+|.++.++|||     ++.| ++|.+
T Consensus       222 l~~I~~~a~~~~~~~iv~~d~~~-~g~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l  280 (447)
T PRK00451        222 LEEIAEIAHAGGALFIVGVDPVS-LGLLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFF  280 (447)
T ss_pred             HHHHHHHHHHCCCEEEEEcChHH-hccCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHH
Confidence            99999999999999998  6442 2222111       112579999999997     3334 56654

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.73  E-value=6e-17  Score=163.20  Aligned_cols=165  Identities=12%  Similarity=0.014  Sum_probs=128.9

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      .+++++.+++++|.+                    ++...+||+|+|+++..++.+.....               ..++
T Consensus        69 ~~~~r~~la~~~~~~--------------------~~~~v~~t~g~t~~l~~~~~~~~~~~---------------~~~g  113 (406)
T PRK09295         69 MENVRKQAALFINAR--------------------SAEELVFVRGTTEGINLVANSWGNSN---------------VRAG  113 (406)
T ss_pred             HHHHHHHHHHHcCcC--------------------CCCeEEEeCCHHHHHHHHHHHhhhhc---------------CCCc
Confidence            367889999999974                    23468999999999877665432110               0134


Q ss_pred             eEEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ..|++++.+|.+....    ++..+.+++.||.++++.+|+++|+++++++      +.+|+++..++.+|.+.|+++|+
T Consensus       114 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~------t~lv~l~~~~n~tG~~~~~~~i~  187 (406)
T PRK09295        114 DNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDER------TRLLAITHVSNVLGTENPLAEMI  187 (406)
T ss_pred             CEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCC------cEEEEEecchhcccccCCHHHHH
Confidence            5799999999876443    3456789999999888999999999998653      45888899999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|++++||+||+.+....+     +.. ..+|.+++++|| ++.|.|+|++|
T Consensus       188 ~~~~~~~~~vivD~a~~~g~~~~~-----~~~-~~~D~~~~s~~K-~~gp~G~G~l~  237 (406)
T PRK09295        188 ALAHQHGAKVLVDGAQAVMHHPVD-----VQA-LDCDFYVFSGHK-LYGPTGIGILY  237 (406)
T ss_pred             HHHHHcCCEEEEEcccccCccccC-----chh-cCCCEEEeehhh-ccCCCCcEEEE
Confidence            999999999999999988754221     111 146999999999 55699999875

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.73  E-value=8.8e-17  Score=161.34  Aligned_cols=164  Identities=12%  Similarity=-0.003  Sum_probs=128.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++.+++++|.+                    ++...+||+|+|+++..++.+.....               ..++.
T Consensus        63 ~~~r~~la~~~g~~--------------------~~~~i~~t~g~t~~l~~~~~~~~~~~---------------~~~gd  107 (398)
T TIGR03392        63 ELARQQVARFLNAP--------------------DAENIVWTRGTTESINLVAQSYARPR---------------LQPGD  107 (398)
T ss_pred             HHHHHHHHHHhCCC--------------------CCCeEEEeCChHHHHHHHHHHhhhcc---------------CCCCC
Confidence            67889999999985                    23468999999999887776542100               01345


Q ss_pred             EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++.+|.|...    .+...|.+++.||++.++.+|+++|+++|.+.      +.+|+.+..++.+|.+.|+++|++
T Consensus       108 ~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~i~~  181 (398)
T TIGR03392       108 EIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPR------TRILALGQMSNVTGGCPDLARAIT  181 (398)
T ss_pred             EEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccC------ceEEEEECccccccccCCHHHHHH
Confidence            79999999988533    34566889999999888899999999999654      347888899999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|+++|++++||++|+.+.... ...    .+ .+|.+++++||+ +.|.|+|++|
T Consensus       182 ~~~~~~~~~ivD~a~~~~~~~~-~~~----~~-~~d~~~~s~~K~-~gp~G~G~l~  230 (398)
T TIGR03392       182 LAHQYGAVVVVDGAQGVVHGPP-DVQ----AL-DIDFYAFSGHKL-YGPTGIGVLY  230 (398)
T ss_pred             HHHHcCCEEEEEhhhhcCCCCC-Chh----hc-CCCEEEEecccc-cCCCceEEEE
Confidence            9999999999999998765321 211    11 369999999995 5688999875

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.73  E-value=1.4e-16  Score=159.24  Aligned_cols=170  Identities=15%  Similarity=0.093  Sum_probs=127.0

Q ss_pred             CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596         152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH  231 (375)
Q Consensus       152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~  231 (375)
                      ++....|..++++++.+++++++|.+.                     ...+++++|+.+...++.+++...        
T Consensus        55 ~~~~~~g~~~~~~~~~~~la~~~g~~~---------------------~~v~~~~~g~~~~~~~~~~~~~~~--------  105 (398)
T cd00613          55 QPEISQGRLQALFELQTMLCELTGMDV---------------------ANASLQDEATAAAEAAGLAAIRAY--------  105 (398)
T ss_pred             ChhhhhhHHHHHHHHHHHHHHHHCCCc---------------------cceeccCchHHHHHHHHHHHHhcc--------
Confidence            344457788888999999999999872                     135677766655544444443210        


Q ss_pred             CcchhhhhcCceEEEecCCCchHHHHHHHHcC----CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC
Q psy1596         232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGL----VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG  307 (375)
Q Consensus       232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~----~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~  307 (375)
                              .++..|++++..|.+...++.+.+    .+++.||+++++.+|+++|++++.++      +.+|+++.++ .
T Consensus       106 --------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------t~~viv~~~~-~  170 (398)
T cd00613         106 --------HKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEE------VAALMVQYPN-T  170 (398)
T ss_pred             --------cCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCC------eEEEEEECCC-C
Confidence                    024578899999999999886544    78999999878899999999998543      3467777775 6


Q ss_pred             ccccccH-HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         308 ACAFDNL-EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       308 tGavDpl-~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      +|.+.++ ++|+++|+++|+|+++|++++.+......      +-..+|+++.++|||+ .|+++|
T Consensus       171 ~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~------~~~~~d~~~~s~~K~~-~p~g~G  229 (398)
T cd00613         171 LGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPP------GEYGADIVVGNLQKTG-VPHGGG  229 (398)
T ss_pred             CceecchHHHHHHHHHhcCCEEEEEeccccccCCCCh------HHcCCCEEEeeccccC-CCCCCC
Confidence            8999885 99999999999999999998765432211      1114799999999999 887655

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.72  E-value=1.2e-16  Score=138.90  Aligned_cols=163  Identities=20%  Similarity=0.061  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.++++++++.+                     ...+++++|||+|+..++.+++.                   ++.
T Consensus         3 ~~~~~~l~~~~~~~---------------------~~~~~~~~~~t~a~~~~~~~~~~-------------------~~~   42 (170)
T cd01494           3 EELEEKLARLLQPG---------------------NDKAVFVPSGTGANEAALLALLG-------------------PGD   42 (170)
T ss_pred             HHHHHHHHHHcCCC---------------------CCcEEEeCCcHHHHHHHHHHhCC-------------------CCC
Confidence            57889999999722                     24589999999999999887643                   123


Q ss_pred             EEEecCCCchHHH-HHHHHcCCeEEEEecCCCCCcCHH--HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVE-KAGLIGLVKMRYIESDDKLSLRGD--KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~-kaa~lg~~~v~~Vp~d~~g~md~e--~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|++++..|.+.. ..+...+.+++.++.++++..+.+  .+++..     ....|.+++.+..++.+|...|+++|+++
T Consensus        43 ~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~~~l~~~  117 (170)
T cd01494          43 EVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPLKEIRKI  117 (170)
T ss_pred             EEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCHHHHHHH
Confidence            6888999999888 677778889999998765544332  333322     23347789999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|+++|+|+||+++....+...   .....+|.++.++|||++. .++|+++
T Consensus       118 ~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~d~~~~s~~K~~~~-~~~G~l~  168 (170)
T cd01494         118 AKEYGILLLVDAASAGGASPAPGVL---IPEGGADVVTFSLHKNLGG-EGGGVVI  168 (170)
T ss_pred             HHHcCCEEEEecccccccccccccc---cccccCCEEEEEcccccCC-CceEEEE
Confidence            9999999999999999876432211   1124589999999999988 7888874

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.72  E-value=1.5e-16  Score=159.88  Aligned_cols=165  Identities=13%  Similarity=0.047  Sum_probs=129.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      -+++++.+++++|.+                    ++...+||+|+|+++..++.+.....               ..++
T Consensus        65 ~~~~r~~la~~~g~~--------------------~~~~i~~~~~~t~~i~~~~~~~~~~~---------------~~~g  109 (401)
T PRK10874         65 YEAAREQVAQLLNAP--------------------DAKNIVWTRGTTESINLVAQSYARPR---------------LQPG  109 (401)
T ss_pred             HHHHHHHHHHHcCCC--------------------CCCEEEEECCHHHHHHHHHHHhhhcc---------------CCCc
Confidence            378889999999984                    23468999999999877765542100               0134


Q ss_pred             eEEEecCCCchHHH----HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         243 LVAYCSDQAHSSVE----KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~----kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ..|++++.+|.|..    +.++..|.+++.||.++++.+|+++|+++|+++      +.+|+.+..++.||.+.|+++|+
T Consensus       110 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~i~  183 (401)
T PRK10874        110 DEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPR------TRILALGQMSNVTGGCPDLARAI  183 (401)
T ss_pred             CEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcC------cEEEEEeCCcccccCcCCHHHHH
Confidence            57999999998753    334556789999999888999999999999654      44788899999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|++++||+||+.+.... ..    ..+ .+|.+++++||+ +.|.|+|++|
T Consensus       184 ~l~~~~g~~~ivD~a~~~g~~~~-~~----~~~-~~d~~~~s~~K~-~gp~G~G~l~  233 (401)
T PRK10874        184 TLAHQAGMVVMVDGAQGAVHFPA-DV----QAL-DIDFYAFSGHKL-YGPTGIGVLY  233 (401)
T ss_pred             HHHHHcCCEEEEECCcccccccC-Cc----hhc-CCCEEEEecccc-cCCCccEEEE
Confidence            99999999999999998765422 11    122 379999999995 6799999875

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.69  E-value=6e-16  Score=153.32  Aligned_cols=165  Identities=7%  Similarity=-0.036  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+.                   +....++|+|||+++..++.+...                  .++.
T Consensus        38 ~~~r~~la~l~~~~~-------------------~~~~i~~t~~~t~al~~~~~~l~~------------------~~~~   80 (363)
T TIGR02326        38 EQIRQQLLALATAEE-------------------GYTSVLLQGSGTFAVEAVIGSAVP------------------KDGK   80 (363)
T ss_pred             HHHHHHHHHHhCCCC-------------------CceEEEEcCCCHHHHHHHHHhcCC------------------CCCe
Confidence            678999999999972                   223578999999999887765422                  0233


Q ss_pred             EEEecCCCchHH-HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSV-EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv-~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      +++++...|.+. .+.+...|.+++.||+++++.+|+++|++++++...    +.+|+.+...|.||.+.|+++|+++|+
T Consensus        81 vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~i~~I~~l~~  156 (363)
T TIGR02326        81 LLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPA----ITHIALVHCETTTGILNPIEAVAKLAH  156 (363)
T ss_pred             EEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCC----ccEEEEEeecCCccccCcHHHHHHHHH
Confidence            566666666663 455666778999999988899999999999976422    335777888999999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|++++||++++.+....+     +..+ .+|.++.++|||++.|.|.|+++
T Consensus       157 ~~g~~livD~~~~~g~~~~~-----~~~~-~~D~~~~s~~K~l~~p~G~G~l~  203 (363)
T TIGR02326       157 RHGKVTIVDAMSSFGGIPID-----IAEL-HIDYLISSANKCIQGVPGFGFVI  203 (363)
T ss_pred             HcCCEEEEEccccccCcccc-----hhhc-CccEEEecCccccccCCcceEEE
Confidence            99999999999987654221     1111 36999999999999999999874

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.69  E-value=1.7e-15  Score=151.24  Aligned_cols=163  Identities=13%  Similarity=0.071  Sum_probs=129.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .+..+.+++++|.+.                       ..+++||+++|..++.+...                   ++.
T Consensus        54 ~~~~e~lA~~~g~~~-----------------------~~i~~g~~~a~~~~~~~l~~-------------------~gd   91 (370)
T TIGR02539        54 HDFLEDLAEFLGMDE-----------------------ARVTHGAREGKFAVMHALCK-------------------EGD   91 (370)
T ss_pred             HHHHHHHHHHhCCCc-----------------------eEEECChHHHHHHHHHHhhC-------------------CCC
Confidence            566777999999872                       57899999999887765432                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhc-CCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKK-HLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~-g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|+++...|+|...++++.+.+++.+|.+  +++.+|+++|+++|++.... +..+.+|+.+.+++++|.+.|+++|+++
T Consensus        92 ~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~l  171 (370)
T TIGR02539        92 WVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKV  171 (370)
T ss_pred             EEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHH
Confidence            78899999999998888889999999986  45889999999999753321 1235678888899999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++|++++||+||+.+.+.. ....     ..+|.++.++|||++.+.++|++
T Consensus       172 a~~~~~~livDea~~~g~~~~-~~~~-----~~~di~v~s~sK~~~~~g~~G~l  219 (370)
T TIGR02539       172 CREKGVPLLLNCAYTVGRMPV-SAKE-----IGADFIVGSGHKSMAASGPCGVL  219 (370)
T ss_pred             HHHcCCeEEEECccccCCcCC-CHHH-----cCCCEEEeeCcccccCCCCEEEE
Confidence            999999999999999874221 1111     13699999999999876767765

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.68  E-value=9.1e-16  Score=155.57  Aligned_cols=164  Identities=12%  Similarity=0.021  Sum_probs=127.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++.+++++|.+                    ++...+||+|+|+++...+.......               ..++.
T Consensus        79 ~~~r~~la~~~~~~--------------------~~~~v~~t~g~t~al~~i~~~~~~~~---------------~~~gd  123 (424)
T PLN02855         79 ELARKKVAAFINAS--------------------TSREIVFTRNATEAINLVAYTWGLAN---------------LKPGD  123 (424)
T ss_pred             HHHHHHHHHHcCCC--------------------CCCEEEEeCCHHHHHHHHHHHhhhhc---------------CCCcC
Confidence            67889999999986                    23468999999999776654321000               01345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++..+|.|...+.    +..|.+++.||++.++.+|+++|+++|++.      +.+|+.+..++.+|.+.|+++|++
T Consensus       124 ~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~I~~  197 (424)
T PLN02855        124 EVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEK------TKLVATHHVSNVLGSILPVEDIVH  197 (424)
T ss_pred             EEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccC------ceEEEEeCccccccccCCHHHHHH
Confidence            7899999998865543    345789999999877889999999999653      458889999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|+++|++++||++|+.+....+     +... .+|.+++++||+ +.|.|+|++|
T Consensus       198 l~~~~g~~vivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~-~gp~G~G~l~  246 (424)
T PLN02855        198 WAHAVGAKVLVDACQSVPHMPVD-----VQTL-GADFLVASSHKM-CGPTGIGFLW  246 (424)
T ss_pred             HHHHcCCEEEEEhhhhcCCcCCC-----chhc-CCCEEEeecccc-cCCCccEEEE
Confidence            99999999999999987653221     1111 369999999995 6699999875

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.68  E-value=9.8e-16  Score=154.68  Aligned_cols=169  Identities=14%  Similarity=0.006  Sum_probs=131.4

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .++.+++.+++++++|.+                    .....+++++||.++..++....+                  
T Consensus        41 ~~~~~~~~~~l~~~~g~~--------------------~~~~vi~~~~gt~a~~~a~~~~~~------------------   82 (401)
T PLN02409         41 PALTKELLEDVKYIFKTK--------------------SGTPFIFPTTGTGAWESALTNTLS------------------   82 (401)
T ss_pred             HHHHHHHHHHHHHHhCCC--------------------CCCEEEEeCCcHHHHHHHHHhcCC------------------
Confidence            445589999999999987                    223578999999988776654211                  


Q ss_pred             cCceEEEecCCCchHHH--HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         240 NSRLVAYCSDQAHSSVE--KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~--kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                       ++..|++++..|++..  ..++..|.+++.|+.+.++.+|+++|++++++++.  ..+.+|+.+..+|.||.+-|+++|
T Consensus        83 -~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~--~~~k~v~~~~~~~~tG~~~~~~~i  159 (401)
T PLN02409         83 -PGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTN--HKIKAVCVVHNETSTGVTNDLAGV  159 (401)
T ss_pred             -CCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcC--CCccEEEEEeecccccccCCHHHH
Confidence             3456888888997764  44555678999999876667999999999986421  125588889999999999999999


Q ss_pred             HHH--HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPI--CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~i--a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++  |+++|++++||++++.+.....     +..+ .+|.+++++|||++.|.|+|++|
T Consensus       160 ~~l~~~~~~g~~~vvD~v~s~g~~~id-----~~~~-~~D~~~~s~~K~l~~P~G~G~l~  213 (401)
T PLN02409        160 RKLLDCAQHPALLLVDGVSSIGALDFR-----MDEW-GVDVALTGSQKALSLPTGLGIVC  213 (401)
T ss_pred             HHHHhhhccCcEEEEEcccccCCcccc-----cccc-CccEEEEcCccccCcCCCcceeE
Confidence            999  9999999999999987654211     1111 36999999999999999999885

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.66  E-value=2.1e-15  Score=163.73  Aligned_cols=178  Identities=12%  Similarity=0.040  Sum_probs=140.4

Q ss_pred             hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC-ChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT-TASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts-GGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      -.|+.++-.+..+|+++++|++.                       ..+.. +|+++++.++++.|.+...+ +      
T Consensus       538 sQG~lq~i~elq~~l~eLtGmd~-----------------------~Sl~p~sGA~gE~A~Lmair~yh~~~-G------  587 (954)
T PRK12566        538 AEGYRAMIDELEAWLCAITGFDA-----------------------ICMQPNSGAQGEYAGLLAIRRYHRSR-G------  587 (954)
T ss_pred             hcCHHHHHHHHHHHHHHHHCCCe-----------------------EeecCCchHHHHHHHHHHHHHHHHhc-C------
Confidence            45777777888899999999982                       24555 78899999999888654321 1      


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                          ...+.+|+++..+|.+....+...|.+++.||+|++|.+|+++|++.|++...   ...+|+.|.+++..+..+|+
T Consensus       588 ----e~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~---~laaVmiT~Pnt~Gv~e~~V  660 (954)
T PRK12566        588 ----QSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAAGD---RLSCLMITYPSTHGVYEEGI  660 (954)
T ss_pred             ----CCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhccCC---CEEEEEEEecCcCceecchH
Confidence                11345899999999888777778899999999999999999999999974221   25688899998888777899


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|+++|..++||||+..+.......     +--.||.+++++|||+++|.|.|..|
T Consensus       661 ~eI~~iah~~Galv~vDgA~~~a~~~l~~P-----g~~GADi~~~s~HKtf~~P~G~GGP~  716 (954)
T PRK12566        661 REICEVVHQHGGQVYMDGANLNAQVGLARP-----ADIGADVSHMNLHKTFCIPHGGGGPG  716 (954)
T ss_pred             HHHHHHHHHcCCEEEEEeeChhhccCCCCh-----hhcCCCEEEecCCcccCcCccCCCCc
Confidence            999999999999999999997543322111     11257999999999999999999764

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.66  E-value=5.2e-15  Score=144.90  Aligned_cols=166  Identities=11%  Similarity=0.006  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      .+.+.+.+++++|.+.                   +....++++|||+++..++......                  ++
T Consensus        33 ~~~~~~~la~~~~~~~-------------------~~~~i~~~~~gt~~l~~~~~~~~~~------------------~~   75 (355)
T TIGR03301        33 TDQVRDRLLALAGGDD-------------------NHTCVLLQGSGTFAVEATIGSLVPR------------------DG   75 (355)
T ss_pred             HHHHHHHHHHHhcCCC-------------------CCcEEEEeCCcHHHHHHHHHhccCC------------------CC
Confidence            3788999999999982                   2235678999999998887664321                  12


Q ss_pred             eEEEecCCCchH-HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         243 LVAYCSDQAHSS-VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       243 ~vV~~S~~aH~S-v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      .+++++...+.+ +..++...|.+++.|+.++++.+|+++|++++++..    ...+|+.+...|.+|.+.|+++|+++|
T Consensus        76 ~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~~~~G~~~~~~~i~~l~  151 (355)
T TIGR03301        76 KLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADP----DITHVATVHHETTTGILNPLEAIAKVA  151 (355)
T ss_pred             eEEEECCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCC----CceEEEEEecCCcccchhHHHHHHHHH
Confidence            245555555544 445566678889999988788999999999997532    244677788889999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++++++++||++++.+.... .+.    .. .+|.+..++|||++.|.|+|+++
T Consensus       152 ~~~~~~livD~~~s~g~~~~-~~~----~~-~~d~~~~s~~K~l~~~~G~g~~~  199 (355)
T TIGR03301       152 RSHGAVLIVDAMSSFGAIPI-DIE----EL-DVDALIASANKCLEGVPGFGFVI  199 (355)
T ss_pred             HHcCCEEEEEeccccCCccc-chh----hc-CccEEEecCCcccccCCceeEEE
Confidence            99999999999887664321 111    11 36999999999998898988764

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PLN02721 threonine aldolase

Probab=99.65  E-value=2.5e-15  Score=147.40  Aligned_cols=166  Identities=17%  Similarity=0.168  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       .++++++||++++.++.+....                  ++.
T Consensus        43 ~~l~~~la~~~~~~-----------------------~~~~~~~Gs~a~~~~l~~~~~~------------------~gd   81 (353)
T PLN02721         43 LRLEEEMAKIFGKE-----------------------AALFVPSGTMGNLISVLVHCDV------------------RGS   81 (353)
T ss_pred             HHHHHHHHHHhCCc-----------------------eeEEecCccHHHHHHHHHHccC------------------CCC
Confidence            56777788888866                       2689999999998777664320                  245


Q ss_pred             EEEecCCCchHHHHH---HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcC-CccEEEEEEc-CCCCcccc---ccHH
Q psy1596         244 VAYCSDQAHSSVEKA---GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKH-LIPFFVCGTL-GTTGACAF---DNLE  315 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka---a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g-~~p~~Vv~t~-GtT~tGav---Dpl~  315 (375)
                      .|++++.+|+++.+.   +...|.+++.+|.++++.+|+++|+++|++....+ ..+.+|+.+. .++++|.+   ++++
T Consensus        82 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~  161 (353)
T PLN02721         82 EVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTD  161 (353)
T ss_pred             eEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHH
Confidence            788999999988873   45678899999988889999999999997532211 1244555544 45567765   4589


Q ss_pred             HHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                      +|+++|+++|+|+|+|+||..+........ ....++.+|++++++|||+..|.|+
T Consensus       162 ~l~~l~~~~g~~livD~a~~~~~~~~~~~~-~~~~~~~~d~~~~s~sK~l~~~~G~  216 (353)
T PLN02721        162 KVGELAKRHGLKLHIDGARIFNASVALGVP-VHRLVKAADSVSVCLSKGLGAPVGS  216 (353)
T ss_pred             HHHHHHHHcCCEEEEEchhhhcchhhhCCC-HHHHhhhCCEEEEecccccCCceee
Confidence            999999999999999999865432111111 1111245799999999999988664

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.65  E-value=1.1e-15  Score=149.19  Aligned_cols=162  Identities=19%  Similarity=0.225  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++| +                      ...++++|||+++..++.+...                   ++.
T Consensus        35 ~~l~~~~a~~~g-~----------------------~~~~~~~~gt~a~~~~~~~l~~-------------------~gd   72 (338)
T cd06502          35 AKLEARAAELFG-K----------------------EAALFVPSGTAANQLALAAHTQ-------------------PGG   72 (338)
T ss_pred             HHHHHHHHHHhC-C----------------------CeEEEecCchHHHHHHHHHhcC-------------------CCC
Confidence            788899999999 5                      2479999999998887765432                   245


Q ss_pred             EEEecCCCchHHHHH---HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcC-CccEEEEEEcCCCCcc--ccccHHHH
Q psy1596         244 VAYCSDQAHSSVEKA---GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKH-LIPFFVCGTLGTTGAC--AFDNLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka---a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g-~~p~~Vv~t~GtT~tG--avDpl~eI  317 (375)
                      .|++++.+|.++.++   +.+.|.+++.+|.+. +.+|+++|++++++..+.+ ..+.+|+.+.+++..|  ..+++++|
T Consensus        73 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i  151 (338)
T cd06502          73 SVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAI  151 (338)
T ss_pred             eEEEecCcceeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHH
Confidence            788999999987653   356788999999865 7899999999997532111 1355677777766433  35889999


Q ss_pred             HHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                      +++|+++|+++|+|+||..+.....  ......   ..+|.++.++|||++.|.|+
T Consensus       152 ~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g~  204 (338)
T cd06502         152 SALAKENGLPLHLDGARLANAAAALGVALKTYK---SGVDSVSFCLSKGGGAPVGA  204 (338)
T ss_pred             HHHHHHcCCeEeechHHHHHHHHhcCCCHHHHH---hcCCEEEEeccccCCCccce
Confidence            9999999999999999854322111  111111   35799999999999988654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.65  E-value=4.6e-15  Score=148.44  Aligned_cols=167  Identities=14%  Similarity=0.125  Sum_probs=126.3

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      +..++.+++++.+++++|.+.                     ...++++|+|+++...+.+.....              
T Consensus        57 ~~~~~~~~l~~~ia~~~~~~~---------------------~~v~~~~~~t~~l~~~~~~~~~~~--------------  101 (397)
T TIGR01976        57 RADQVVDDAREAVADLLNADP---------------------PEVVFGANATSLTFLLSRAISRRW--------------  101 (397)
T ss_pred             HHHHHHHHHHHHHHHHcCCCC---------------------CeEEEeCCHHHHHHHHHHHHHhcC--------------
Confidence            334555789999999999872                     247899999998765554432110              


Q ss_pred             hhcCceEEEecCCCchHHHHH----HHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         238 EINSRLVAYCSDQAHSSVEKA----GLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                        .++..|++++..|.|....    ++..|.+++.++.++ ++.+|+++|+++|+++      +.+|+.+.+++.+|.+.
T Consensus       102 --~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~------~~lv~i~~~~n~tG~~~  173 (397)
T TIGR01976       102 --GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPR------TRLVAVTAASNTLGSIV  173 (397)
T ss_pred             --CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCC------ceEEEEeCCCCCCCccC
Confidence              1345788999999887644    345788999999875 7899999999998643      44888999999999999


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|+++|+++|++++||+|++.+.... ....  .   .+|.+++++|||++.+  +|+++
T Consensus       174 ~~~~i~~~~~~~~~~~ivD~a~~~~~~~~-~~~~--~---~~d~~~~s~~K~~g~~--~G~l~  228 (397)
T TIGR01976       174 DLAAITELVHAAGALVVVDAVHYAPHGLI-DVQA--T---GADFLTCSAYKFFGPH--MGILW  228 (397)
T ss_pred             CHHHHHHHHHHcCCEEEEehhhhccccCC-CHHH--c---CCCEEEEechhhcCCc--eEEEE
Confidence            99999999999999999999997654321 1111  1   3699999999998643  67653

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.62  E-value=4.1e-15  Score=152.60  Aligned_cols=165  Identities=13%  Similarity=0.045  Sum_probs=120.9

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe---CChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ---TTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft---sGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      ...+|+.+++.++++||.+.                     ..-+++   +|||++|+.++.+...              
T Consensus        78 ~~~iE~~ar~~~a~lf~a~~---------------------~~~~~~~~~~sgt~an~~v~~al~~--------------  122 (452)
T PTZ00094         78 VDKIENLCQKRALEAFGLDP---------------------EEWGVNVQPYSGSPANFAVYTALLQ--------------  122 (452)
T ss_pred             HHHHHHHHHHHHHHHhCCCc---------------------ccceeecCCCchHHHHHHHHHHhcC--------------
Confidence            46666678889999999872                     112355   8999999998876521              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHH-Hc-------C--CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGL-IG-------L--VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT  305 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~-lg-------~--~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt  305 (375)
                           ++..|++++..|.+....+. +.       +  .++..++++.+|.+|+++|++++++.+     |.+|+++  .
T Consensus       123 -----~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~-----~~lvi~~--~  190 (452)
T PTZ00094        123 -----PHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFR-----PKLIIAG--A  190 (452)
T ss_pred             -----CCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhC-----CCEEEEe--C
Confidence                 24578899999988765431 11       1  234456677789999999999997532     3344433  4


Q ss_pred             CCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         306 TGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       306 T~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +.+|.+.|+++|+++|+++|+++|||+||+.+.+...-..   ..+..+|.+++++|||++.|.|.++
T Consensus       191 s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~---~~~~~~D~l~~S~hK~l~GP~Gg~l  255 (452)
T PTZ00094        191 SAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLP---SPFPYADVVTTTTHKSLRGPRSGLI  255 (452)
T ss_pred             CCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCC---CCCCCCcEEEcCCccCCCCCCceEE
Confidence            5799999999999999999999999999999976432111   1234689999999999999998443

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.60  E-value=2.4e-14  Score=142.97  Aligned_cols=173  Identities=14%  Similarity=0.057  Sum_probs=119.7

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ...+.+++.+++++++|.+                       ..++|+|+|+|+..++.+..... .+....  ... ..
T Consensus        43 ~~~~~~~~~~~~a~~~g~~-----------------------~~~~~~g~t~al~~al~al~~~G-d~~~~~--~~~-~s   95 (363)
T TIGR01437        43 IKELVNKTGEYIANLLGVE-----------------------DAVIVSSASAGIAQSVAAVITRG-NRYLVE--NLH-DS   95 (363)
T ss_pred             HHHHHHHHHHHHHHhhCCC-----------------------eEEEEcCHHHHHHHHHHHHhcCC-Ccchhh--ccc-cc
Confidence            4455688999999999875                       36999999999999998764310 000000  000 00


Q ss_pred             hcCceEEEecCCCchHH-----HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         239 INSRLVAYCSDQAHSSV-----EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv-----~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                      ..++..|+++. .|+..     ..++.+.|.+++.++.  ++.+|+++|+++|.+.++     .+++++...+.+|.+-|
T Consensus        96 ~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~~~t~-----ai~~v~~~~~~~g~~~~  167 (363)
T TIGR01437        96 KIEVNEVVLPK-GHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAITEKTA-----AILYIKSHHCVQKSMLS  167 (363)
T ss_pred             ccccceEEEEC-ccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcChhce-----EEEEEecCCCCcCCcCC
Confidence            11223566765 55443     3445678888888876  456999999999986543     23445666778999999


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|+++|+++|+|+||+...      +... .+ .+|.+++++|||+..|. .|+++
T Consensus       168 ~~~i~~~a~~~gi~vivD~a~~~~~------~~~~-~~-g~D~~~~S~~K~l~gp~-~G~l~  220 (363)
T TIGR01437       168 VEDAAQVAQEHNLPLIVDAAAEEDL------QKYY-RL-GADLVIYSGAKAIEGPT-SGLVL  220 (363)
T ss_pred             HHHHHHHHHHcCCeEEEECCCCCch------HHHH-Hc-CCCEEEEeCCcccCCCc-eEEEE
Confidence            9999999999999999999997321      1101 11 36999999999999997 67653

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.60  E-value=3.3e-14  Score=141.04  Aligned_cols=165  Identities=10%  Similarity=0.022  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      ..++.+.+++++|.+.                   +....++|++||+++..++.+...                   ++
T Consensus        39 ~~~~~~~l~~l~~~~~-------------------~~~~i~~~~~gt~~l~~~~~~l~~-------------------~~   80 (368)
T PRK13479         39 TASVRAKLVAIATGEE-------------------GYTCVPLQGSGTFSVEAAIGSLVP-------------------RD   80 (368)
T ss_pred             HHHHHHHHHHHhCCCC-------------------CceEEEEcCCcHHHHHHHHHhccC-------------------CC
Confidence            4789999999999862                   223467899999998888776532                   12


Q ss_pred             eEEEecCCCchHH--HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         243 LVAYCSDQAHSSV--EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       243 ~vV~~S~~aH~Sv--~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      ..+++....++..  .+.+...|.+++.||.++++.+|+++|++++++..+    +.+|..+..+|.+|.+.|+++|+++
T Consensus        81 ~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~~~~i~~l  156 (368)
T PRK13479         81 GKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPR----ITHVALVHCETTTGILNPLDEIAAV  156 (368)
T ss_pred             CeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCC----CcEEEEEcccCccccccCHHHHHHH
Confidence            2444544555544  355666788999999987788999999999875321    3367788899999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|++++||++++.+....   .  +... .+|.++.++|||++.|.|+|+++
T Consensus       157 ~~~~~~~livDa~~~~g~~~~---~--~~~~-~~d~~v~s~~K~l~g~~G~G~l~  205 (368)
T PRK13479        157 AKRHGKRLIVDAMSSFGAIPI---D--IAEL-GIDALISSANKCIEGVPGFGFVI  205 (368)
T ss_pred             HHHcCCEEEEEcccccCCccc---c--cccc-CceEEEecCccccccCCCceEEE
Confidence            999999999998887664321   1  1111 46999999999999999999874

>TIGR01814 kynureninase kynureninase

Probab=99.58  E-value=2.5e-14  Score=144.38  Aligned_cols=148  Identities=13%  Similarity=0.025  Sum_probs=111.7

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH----HHcCCeE----EEEec
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG----LIGLVKM----RYIES  271 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa----~lg~~~v----~~Vp~  271 (375)
                      ...+||+|+|+++..++......       .         .++.+|+++..+|.|+..++    +..|.++    +.++.
T Consensus        87 ~~v~~~~~~t~~l~~~~~~~~~~-------~---------~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~  150 (406)
T TIGR01814        87 DEVVVMNTLTINLHLLLASFYKP-------T---------PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP  150 (406)
T ss_pred             CcEEEeCCchHHHHHHHHHhcCC-------c---------CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc
Confidence            35799999999987776543110       0         01236889999999976654    3345565    56777


Q ss_pred             CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC
Q psy1596         272 DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV  351 (375)
Q Consensus       272 d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi  351 (375)
                      +++|.+|+++++++++...   ..+.+|+++..++.+|.+.|+++|+++|+++|++++||++++++.+...     +...
T Consensus       151 ~~~g~~~~~~l~~~~~~~~---~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id-----~~~~  222 (406)
T TIGR01814       151 REEETLRLEDILDTIEKNG---DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLD-----LHDW  222 (406)
T ss_pred             CCCCccCHHHHHHHHHhcC---CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccc-----cccC
Confidence            7778999999999986432   1255888999999999999999999999999999999999999876321     1111


Q ss_pred             CcccEEEEcCcccCCCCCcce
Q psy1596         352 EYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       352 e~aDSi~~d~HK~l~~P~~~g  372 (375)
                       .+|.+++++||||+.|.|+|
T Consensus       223 -gvD~~~~s~hK~l~g~pG~~  242 (406)
T TIGR01814       223 -GVDFACWCTYKYLNAGPGAG  242 (406)
T ss_pred             -CCCEEEEcCccccCCCCCeE
Confidence             46999999999998777843

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.58  E-value=9.6e-14  Score=134.54  Aligned_cols=175  Identities=15%  Similarity=0.049  Sum_probs=128.9

Q ss_pred             hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      ..+..++++.+.+++...+|.+.                   .....++++|||+++..++.+...              
T Consensus        35 ~~~~~~l~~~l~~~l~~~~~~~~-------------------~~~~~~~~~~~t~a~~~~~~~~~~--------------   81 (350)
T cd00609          35 DPGLPELREAIAEWLGRRGGVDV-------------------PPEEIVVTNGAQEALSLLLRALLN--------------   81 (350)
T ss_pred             CCCcHHHHHHHHHHHHHHhCCCC-------------------CcceEEEecCcHHHHHHHHHHhCC--------------
Confidence            35677788888888888887652                   334688999999998887766532              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH--HHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG--DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~--e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                           ++..|+++..+|.++..+++..+.+++.|+.++++.++.  +.+++.+..      .+.+|+++.+++++|.+.|
T Consensus        82 -----~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~  150 (350)
T cd00609          82 -----PGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLS  150 (350)
T ss_pred             -----CCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccC
Confidence                 235799999999999999988889999999988887776  555544322      2557888889999999987


Q ss_pred             HHHH---HHHHHhcCCEEEEecccccCcccchhhhh-hhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         314 LEEL---GPICEKEGLWLHVDAAYAGSSFICPEFRK-WLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       314 l~eI---~~ia~~~~iwlHVDaA~gg~~~~~~~~~~-~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                      ++++   .++|+++|+|+|+|+||+++......... ...+...+|.+..++||+++ .+.++|++
T Consensus       151 ~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i  216 (350)
T cd00609         151 EEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYL  216 (350)
T ss_pred             HHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEE
Confidence            6555   48999999999999999886542211100 01122246888999999988 45566765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>KOG1368|consensus

Probab=99.58  E-value=7.3e-15  Score=139.77  Aligned_cols=177  Identities=16%  Similarity=0.171  Sum_probs=130.4

Q ss_pred             ccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHH
Q psy1596         144 VVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEA  223 (375)
Q Consensus       144 ~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~  223 (375)
                      +...-|..|+.+        .++...+++++|-+                       .|+|+++||++|++|++..+.+ 
T Consensus        47 vgDdVyGeD~tt--------~rLE~~vA~l~GKE-----------------------AgLFv~SGTmgNllaIm~Hc~~-   94 (384)
T KOG1368|consen   47 VGDDVYGEDPTT--------NRLEQRVAELFGKE-----------------------AGLFVPSGTMGNLLAIMVHCHQ-   94 (384)
T ss_pred             cCcccccCCccH--------HHHHHHHHHHhCcc-----------------------ceeeecccccccHHHHHHHhcC-
Confidence            344456667776        77788889998866                       4899999999999999988763 


Q ss_pred             HHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH---HHcCCeEEEEecCCCCCcCHHHHHHHHHHhh-hcCCccEEE
Q psy1596         224 IRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG---LIGLVKMRYIESDDKLSLRGDKLIEAIERDK-KKHLIPFFV  299 (375)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa---~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~-~~g~~p~~V  299 (375)
                                       ++-.|++.+.+|.-..++.   .++++.+++|...++|.||++++|++|.... .-..+|.-+
T Consensus        95 -----------------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~L  157 (384)
T KOG1368|consen   95 -----------------RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKL  157 (384)
T ss_pred             -----------------CCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceE
Confidence                             3447999999996665542   5789999999999999999999999998433 223344434


Q ss_pred             EEEcCCC-Ccc-ccccH---HHHHHHHHhcCCEEEEecccccCccc---chhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596         300 CGTLGTT-GAC-AFDNL---EELGPICEKEGLWLHVDAAYAGSSFI---CPEFRKWLAGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       300 v~t~GtT-~tG-avDpl---~eI~~ia~~~~iwlHVDaA~gg~~~~---~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                      ++.-.|- .+| .+-||   ++|.++|+++|+.||+|||.-+.+..   +| .+..   .+.+||+++.+.|.|++|.|+
T Consensus       158 IclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~-vk~i---~~~fDSVsiCLSKglgAPVGS  233 (384)
T KOG1368|consen  158 ICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVP-VKKI---CSAFDSVSICLSKGLGAPVGS  233 (384)
T ss_pred             EEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCC-HHHH---HHhhhhhhhhhhccCCCCccc
Confidence            4333333 345 66554   55667899999999999997665532   22 1222   245799999999999999987


Q ss_pred             ee
Q psy1596         372 TA  373 (375)
Q Consensus       372 g~  373 (375)
                      =+
T Consensus       234 Vi  235 (384)
T KOG1368|consen  234 VI  235 (384)
T ss_pred             EE
Confidence            43

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.57  E-value=9.8e-14  Score=138.68  Aligned_cols=194  Identities=11%  Similarity=-0.037  Sum_probs=134.3

Q ss_pred             chhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC
Q psy1596         127 FQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT  206 (375)
Q Consensus       127 ~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts  206 (375)
                      .+++.....+.+.+...    .+ +.+....|+..+..++.+.+++++|.+                       ..++++
T Consensus        54 ~~~v~~~~~~~~~~~~~----~~-~~s~~~~G~~~~~~~le~~ia~~~g~~-----------------------~~ii~~  105 (393)
T TIGR01822        54 HPDLIQAAKDALDEHGF----GM-SSVRFICGTQDIHKELEAKIAAFLGTE-----------------------DTILYA  105 (393)
T ss_pred             CHHHHHHHHHHHHHhCC----CC-CCcCcccCChHHHHHHHHHHHHHhCCC-----------------------cEEEEC
Confidence            44555555555554211    12 223444576666688889999999875                       268889


Q ss_pred             ChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHH
Q psy1596         207 TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAI  286 (375)
Q Consensus       207 GGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI  286 (375)
                      ||++||..++.+..+                   ++..|++++.+|.|+..++++.+.+.+.++     .+|+++|+++|
T Consensus       106 ~~~~a~~~~~~~l~~-------------------~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i  161 (393)
T TIGR01822       106 SCFDANGGLFETLLG-------------------AEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQL  161 (393)
T ss_pred             chHHHHHHHHHHhCC-------------------CCCEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHH
Confidence            999998866544311                   345799999999999998877665554443     37999999999


Q ss_pred             HHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC-CcccEEEEcCcc
Q psy1596         287 ERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV-EYANSIAFNPSK  363 (375)
Q Consensus       287 ~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi-e~aDSi~~d~HK  363 (375)
                      ++....+..+.+|+.....+++|.+.|+++|+++|++||+||++|++|+.+.... ..+.  ...++ ..+|.++.++||
T Consensus       162 ~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~-~~~~~~~~~~~~~~~di~~~s~sK  240 (393)
T TIGR01822       162 KEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGP-TGRGSHELCGVMGRVDIITGTLGK  240 (393)
T ss_pred             HhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCC-CCCchHHhcCCCCCCeEEEEEChH
Confidence            8754333345577777677899999999999999999999999999997654311 1000  01222 257999999999


Q ss_pred             cCCCCCcceee
Q psy1596         364 WLMVHFDCTAM  374 (375)
Q Consensus       364 ~l~~P~~~g~l  374 (375)
                      ++..+ ..|++
T Consensus       241 ~l~g~-r~G~~  250 (393)
T TIGR01822       241 ALGGA-SGGFT  250 (393)
T ss_pred             HhhCC-CcEEE
Confidence            98654 34654

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.57  E-value=1.9e-13  Score=133.68  Aligned_cols=187  Identities=13%  Similarity=0.034  Sum_probs=132.6

Q ss_pred             hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596         128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT  207 (375)
Q Consensus       128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG  207 (375)
                      +++...+.+.+.+.+.     ..++.....|.....+++.+++++++|.+                       ..+++++
T Consensus        18 ~~v~~a~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----------------------~~iv~~s   69 (349)
T cd06454          18 PEVIEAAKEALDKYGV-----GAGGSRLISGTSDLHEELEEELAEFHGKE-----------------------AALVFSS   69 (349)
T ss_pred             HHHHHHHHHHHHHhCC-----CCCCcCeecCCchHHHHHHHHHHHHhCCC-----------------------CEEEecc
Confidence            5666666666654211     11222233355556688899999999876                       2478888


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596         208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE  287 (375)
Q Consensus       208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~  287 (375)
                      ||++|+.++.+...                   ++..|++++..|.++..++...+.+++.++.     +|++.|+++|+
T Consensus        70 g~~a~~~~~~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~  125 (349)
T cd06454          70 GYAANDGVLSTLAG-------------------KGDLIISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLR  125 (349)
T ss_pred             HHHHHHHHHHHhcC-------------------CCCEEEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHH
Confidence            89999877654432                   2457889999999999888777778877763     58899999997


Q ss_pred             HhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhc-CCCcccEEEEcCccc
Q psy1596         288 RDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLA-GVEYANSIAFNPSKW  364 (375)
Q Consensus       288 ~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~-gie~aDSi~~d~HK~  364 (375)
                      +.. +...+.+|+.+..++.+|.+.|+++|+++|+++|+++++|++|+.+.+. +....  ... ....+|.++.++||+
T Consensus       126 ~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~  203 (349)
T cd06454         126 EAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYG-PHGRGVEEFGGLTDDVDIIMGTLGKA  203 (349)
T ss_pred             Hhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccC-CCCCChhhhccccccCcEEEeechhh
Confidence            643 1224667888888899999999999999999999999999999865431 11000  011 123579999999999


Q ss_pred             CCCC
Q psy1596         365 LMVH  368 (375)
Q Consensus       365 l~~P  368 (375)
                      ++.+
T Consensus       204 ~~~~  207 (349)
T cd06454         204 FGAV  207 (349)
T ss_pred             hccc
Confidence            8764

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.57  E-value=1e-14  Score=147.33  Aligned_cols=166  Identities=19%  Similarity=0.158  Sum_probs=123.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .+..+.++++||.+         ++             -++|.|.|.+|..+++++..                   ++.
T Consensus        69 ~eAe~~aA~~fGAd---------~t-------------~flvnGsT~g~~a~i~a~~~-------------------~gd  107 (417)
T PF01276_consen   69 KEAEELAARAFGAD---------KT-------------FFLVNGSTSGNQAMIMALCR-------------------PGD  107 (417)
T ss_dssp             HHHHHHHHHHHTES---------EE-------------EEESSHHHHHHHHHHHHHTT-------------------TTC
T ss_pred             HHHHHHHHHhcCCC---------eE-------------EEEecCchHHHHHHHHHhcC-------------------CCC
Confidence            78899999999988         21             24556666778888777643                   456


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCC-----CCcCH-----HHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-----LSLRG-----DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-----g~md~-----e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                      .|+++..+|-|+..|+.+.+..++.|+..++     +.+++     +.|+++|++...... |.+|++|.+ |..|.+-|
T Consensus       108 ~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~-~~~vvlt~P-TY~Gv~~d  185 (417)
T PF01276_consen  108 KVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKA-PRLVVLTSP-TYYGVCYD  185 (417)
T ss_dssp             EEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHC-ESEEEEESS--TTSEEE-
T ss_pred             EEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccC-ceEEEEeCC-CCCeEEEC
Confidence            8999999999999999999999998877421     24666     999999998654322 556888877 78899999


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCccc-------EEEEcCcccCCCCCcceee
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYAN-------SIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD-------Si~~d~HK~l~~P~~~g~l  374 (375)
                      +++|+++|+++++.|+||.|||+...|.+-++..+.  -.||       .++-|.||.|..-..+++|
T Consensus       186 i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~l  251 (417)
T PF01276_consen  186 IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSML  251 (417)
T ss_dssp             HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEE
T ss_pred             HHHHHHHhcccCCEEEEEccccccccCCCCccchhh--ccCccccccceeeeechhhcccccccceEE
Confidence            999999999999999999999999888755443322  1478       9999999999988888776

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.56  E-value=1.1e-13  Score=135.71  Aligned_cols=152  Identities=13%  Similarity=0.055  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++++|||+|+..++.+.+.                  .++.
T Consensus        21 ~~~~~~la~~~~~~-----------------------~~~~~~sgt~al~~~l~~l~~------------------~~gd   59 (352)
T cd00616          21 REFEKAFAEYLGVK-----------------------YAVAVSSGTAALHLALRALGI------------------GPGD   59 (352)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHcCC------------------CCCC
Confidence            77888999999865                       368999999999888876521                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..++...|.+++.+++++ ++.+|+++|++++++.      +.+|+.+   +.+|.+.|+++|.++|+
T Consensus        60 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~l~~  130 (352)
T cd00616          60 EVIVPSFTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITPR------TKAIIPV---HLYGNPADMDAIMAIAK  130 (352)
T ss_pred             EEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcC------CeEEEEE---CCCCCcCCHHHHHHHHH
Confidence            799999999999999888888999999986 7899999999988532      3355555   46899999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEc--CcccCCCCCc
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFN--PSKWLMVHFD  370 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d--~HK~l~~P~~  370 (375)
                      ++|+++++|+||+.+......   .+..  .+|..+++  .|||+..+.|
T Consensus       131 ~~~i~li~D~a~~~g~~~~~~---~~~~--~~d~~~~S~~~~K~~~~~~g  175 (352)
T cd00616         131 RHGLPVIEDAAQALGATYKGR---KVGT--FGDAGAFSFHPTKNLTTGEG  175 (352)
T ss_pred             HcCCeEEEECCCCCCCeECCE---Eccc--CcceeEEcCCCCCCCcccCc
Confidence            999999999999877543211   1111  13555666  5599855443

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK07179 hypothetical protein; Provisional

Probab=99.56  E-value=1.6e-13  Score=138.51  Aligned_cols=158  Identities=14%  Similarity=0.000  Sum_probs=118.9

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+.|++++|.+                       ..+||+||++||..++.+...                   +
T Consensus       100 ~~~~le~~la~~~g~~-----------------------~~~~~~sG~~An~~~l~~l~~-------------------~  137 (407)
T PRK07179        100 PKPQFEKKLAAFTGFE-----------------------SCLLCQSGWAANVGLLQTIAD-------------------P  137 (407)
T ss_pred             HHHHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHhCC-------------------C
Confidence            4467778999998876                       258999999999888865432                   2


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      +..|+++...|.|+..++...+.+++.++.     .|+++|+++|++.     .+.+|++...++++|.+.|+++|.++|
T Consensus       138 g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~pl~~I~~l~  207 (407)
T PRK07179        138 NTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAPLADIVDIA  207 (407)
T ss_pred             CCEEEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHhc-----CCeEEEECCCCCCCCccccHHHHHHHH
Confidence            346888999999999888777776655543     5999999999652     144777777889999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhh--hcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKW--LAGV-EYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gi-e~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +++|+++|+|++|+.+..- +.-+..  ..++ +.+|.++.++||+++.+  +|++
T Consensus       208 ~~~~~~livDea~~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~--~G~l  260 (407)
T PRK07179        208 EEFGCVLVVDESHSLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAGR--AGII  260 (407)
T ss_pred             HHcCCEEEEECcccccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhcc--CeEE
Confidence            9999999999999865321 110000  1123 35799999999998754  5554

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.55  E-value=3.2e-14  Score=155.56  Aligned_cols=170  Identities=12%  Similarity=-0.078  Sum_probs=121.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      -+++++.++++||.+.                   +.-..+||+|+|+|+.+.......                  .++
T Consensus        80 ~e~aR~~ia~~lga~~-------------------~~~~VvFtsnaT~alnlva~~l~~------------------~~g  122 (805)
T PLN02724         80 IESARQQVLEYFNAPP-------------------SDYACVFTSGATAALKLVGETFPW------------------SSE  122 (805)
T ss_pred             HHHHHHHHHHHhCCCc-------------------cceEEEEeCChHHHHHHHHHHCCC------------------CCC
Confidence            3788999999999862                   112579999999997655432210                  123


Q ss_pred             eEEEecCCCchHHHHHHHH---cCCeEEEEecC--------CCCCcCH--HHHHHHHHH----hhhcCCccEEEEEEcCC
Q psy1596         243 LVAYCSDQAHSSVEKAGLI---GLVKMRYIESD--------DKLSLRG--DKLIEAIER----DKKKHLIPFFVCGTLGT  305 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d--------~~g~md~--e~Le~aI~~----~~~~g~~p~~Vv~t~Gt  305 (375)
                      ..|+++...|.|+.....+   .|.+++.++++        +.+.++.  ++|++.++.    ....+..+.+|++++.+
T Consensus       123 d~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vs  202 (805)
T PLN02724        123 SHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSEC  202 (805)
T ss_pred             CeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccc
Confidence            4688899999998855433   46788888876        4555654  667776531    11112234589999999


Q ss_pred             CCccccccHHHHHHHHHhc-------C-CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         306 TGACAFDNLEELGPICEKE-------G-LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       306 T~tGavDpl~eI~~ia~~~-------~-iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +.+|.+.|+++|..+++..       + ++++||||++.+..... .+    .+ .+|.+++++|||++.|.|+|+||
T Consensus       203 N~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piD-v~----~~-~~Dfl~~S~HK~~GgP~G~G~L~  274 (805)
T PLN02724        203 NFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPD-LS----RY-PADFVVVSFYKIFGYPTGLGALL  274 (805)
T ss_pred             cCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCC-hh----hc-CCCEEEEecceeccCCCCceEEE
Confidence            9999999999876655532       3 57999999999876432 11    12 47999999999999999999986

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.54  E-value=1.9e-13  Score=140.70  Aligned_cols=164  Identities=17%  Similarity=0.130  Sum_probs=115.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       .+++|+|||+|+..++.+..+                   ++.
T Consensus        81 ~~Lreaia~~~~~~-----------------------~vv~t~ggt~A~~~~~~all~-------------------pGD  118 (460)
T PRK13238         81 YRLEDAVKDIFGYP-----------------------YTIPTHQGRAAEQILFPVLIK-------------------KGD  118 (460)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEECCCHHHHHHHHHHHhCC-------------------CCC
Confidence            45566677777765                       379999999999988765422                   345


Q ss_pred             EEEecCCCchHHHHH-HHHcCCeEEEEecCC--------C--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc-c-
Q psy1596         244 VAYCSDQAHSSVEKA-GLIGLVKMRYIESDD--------K--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC-A-  310 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~d~--------~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG-a-  310 (375)
                       |++++. |+....+ +.+.|.+++.+++++        .  |.+|+++|+++|.+...  ..+.+|+++.++|.+| . 
T Consensus       119 -Vii~~p-~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~NptGG~v  194 (460)
T PRK13238        119 -VVPSNY-HFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNNSAGGQP  194 (460)
T ss_pred             -EEccCC-cccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCCCCCCcC
Confidence             666655 5555554 578888999999853        2  44999999999975321  1255888899999987 3 


Q ss_pred             --cccHHHHHHHHHhcCCEEEEeccccc-Ccccch----hhhhh-hc-----CCCcccEEEEcCcccCCCCCcceee
Q psy1596         311 --FDNLEELGPICEKEGLWLHVDAAYAG-SSFICP----EFRKW-LA-----GVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       311 --vDpl~eI~~ia~~~~iwlHVDaA~gg-~~~~~~----~~~~~-~~-----gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                        .+++++|+++|++||+++++|+|+.. ++.+..    .++.. +.     -...+|++++++||.+++|.| |++
T Consensus       195 ~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i  270 (460)
T PRK13238        195 VSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLL  270 (460)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEE
Confidence              46789999999999999999998844 222221    11110 00     013589999999999999986 544

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.53  E-value=1.9e-13  Score=137.20  Aligned_cols=168  Identities=13%  Similarity=0.069  Sum_probs=125.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++++.+|+.+.+|.+.                   ++...++|+|+++++..++.+...               
T Consensus        70 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~---------------  115 (391)
T PRK08361         70 AGIPELREAIAEYYKKFYGVDV-------------------DVDNVIVTAGAYEATYLAFESLLE---------------  115 (391)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CcccEEEeCChHHHHHHHHHHhcC---------------
Confidence            4667777888888888878653                   345689999999998877765422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-  313 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-  313 (375)
                          ++..|++++.+|.++...+...|.+++.+|+++  ++.+|+++|++.+++.      +.+|+.+.++|+||.+-+ 
T Consensus       116 ----~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~i~~p~NPtG~~~~~  185 (391)
T PRK08361        116 ----EGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKR------TRMIVINYPNNPTGATLDK  185 (391)
T ss_pred             ----CCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccc------cEEEEEeCCCCCCCcCcCH
Confidence                245788999999999988888888999999865  4579999999988753      336777889999999877 


Q ss_pred             --HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         314 --LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       314 --l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                        +++|+++|+++++++++|++|+....-..............+.++.+++|.++.|
T Consensus       186 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~  242 (391)
T PRK08361        186 EVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMT  242 (391)
T ss_pred             HHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCc
Confidence              8999999999999999999997653211110011110112367889999987655

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.51  E-value=1.3e-12  Score=130.36  Aligned_cols=202  Identities=15%  Similarity=0.044  Sum_probs=134.1

Q ss_pred             CCchhhhhhHHHHhhhccccccc--ccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcE
Q psy1596         125 SPFQKVIGKLSSKIKSHNVVVTE--ADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFI  202 (375)
Q Consensus       125 ~~~~~~~~~~~~~~~~~n~~~~~--~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~G  202 (375)
                      ..-+.+.++..+.+.+.....+.  ...+.+..+.|...+.+++.+.+++++|.+                       ..
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-----------------------~~   74 (370)
T PRK05937         18 SRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-----------------------EA   74 (370)
T ss_pred             CCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-----------------------eE
Confidence            33355666666655553211121  233456667888888899999999999987                       13


Q ss_pred             EEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHH
Q psy1596         203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKL  282 (375)
Q Consensus       203 vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~L  282 (375)
                      ++.++|+.+|+. +..+..                  .++..|+++...|.|+..++.+.....+.++     ..|+++|
T Consensus        75 l~~~sG~~a~~~-~~~~~~------------------~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l  130 (370)
T PRK05937         75 FIVPSGYMANLG-LCAHLS------------------SVTDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHL  130 (370)
T ss_pred             EEECChHHHHHH-HHHHhC------------------CCCCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHH
Confidence            666667778753 222110                  1234788889999999999875433333343     4689999


Q ss_pred             HHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhh--hcCCCcccEEEEc
Q psy1596         283 IEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAGVEYANSIAFN  360 (375)
Q Consensus       283 e~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gie~aDSi~~d  360 (375)
                      +++|++..+.+....+|+++..++++|.+.|+++|+++|+++|+++|||+||+.+.+-. ..+..  ..+....+.+..+
T Consensus       131 ~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~-~g~g~~~~~~~~~~~~~~~t  209 (370)
T PRK05937        131 ESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGD-DGKGFCHSLGYENFYAVLVT  209 (370)
T ss_pred             HHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCC-CCCchHHhhCCCCCcEEEEe
Confidence            99998653322234466677889999999999999999999999999999999764321 11110  1133333455677


Q ss_pred             CcccCCCCCcceeeC
Q psy1596         361 PSKWLMVHFDCTAMW  375 (375)
Q Consensus       361 ~HK~l~~P~~~g~l~  375 (375)
                      ++|.+ .|.|+++++
T Consensus       210 lsK~~-g~~G~~vl~  223 (370)
T PRK05937        210 YSKAL-GSMGAALLS  223 (370)
T ss_pred             chhhh-hcCceEEEc
Confidence            88976 578888875

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.51  E-value=7e-13  Score=132.13  Aligned_cols=174  Identities=11%  Similarity=-0.084  Sum_probs=123.5

Q ss_pred             chhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCC
Q psy1596         153 SIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHP  232 (375)
Q Consensus       153 ~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~  232 (375)
                      +....|...+++++.+++++++|.+                       ..+++++|++++..++.+..            
T Consensus        79 ~~~~~G~~~l~~~l~~~la~~~g~~-----------------------~~i~~tsG~~a~~~~~~~l~------------  123 (397)
T PRK06939         79 VRFICGTQDLHKELEEKLAKFLGTE-----------------------DAILYSSCFDANGGLFETLL------------  123 (397)
T ss_pred             cccccCCcHHHHHHHHHHHHHhCCC-----------------------cEEEEcChHHHHHHHHHHhC------------
Confidence            3445677788899999999999865                       13555666888877654431            


Q ss_pred             cchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         233 ELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       233 ~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                             .++..|++++.+|.++..++.+.+.+++.++.     +|+++|++.+++....+..+.+|+...-.+.+|.++
T Consensus       124 -------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~  191 (397)
T PRK06939        124 -------GKEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA  191 (397)
T ss_pred             -------CCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC
Confidence                   13467999999999999998887777777764     589999999976432222355666555567889999


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccc-hhhhhhhcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGV-EYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gi-e~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++++|.++|+++|+|+++|++|+.+..-- ........++ +.+|.++.++||++..+ -.|.+
T Consensus       192 ~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v  254 (397)
T PRK06939        192 PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYT  254 (397)
T ss_pred             CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEE
Confidence            99999999999999999999996432211 0000111232 34689999999999544 34554

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.50  E-value=7.6e-13  Score=132.89  Aligned_cols=186  Identities=18%  Similarity=0.096  Sum_probs=145.4

Q ss_pred             hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596         128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT  207 (375)
Q Consensus       128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG  207 (375)
                      +.+.....+.+++....     .+.++.+.|+..++.++.+.|++++|.+                       ..++-++
T Consensus        56 ~~~~~a~~~~~~~~g~g-----~~gsR~i~G~~~~h~~LE~~lA~f~g~e-----------------------~al~f~S  107 (388)
T COG0156          56 PELIEAAKAAIRRYGVG-----AGGSRLISGTSDLHVELEEELADFLGAE-----------------------AALLFSS  107 (388)
T ss_pred             HHHHHHHHHHHHHhCCC-----CCCcCcccCCcHHHHHHHHHHHHHhCCC-----------------------cEEEEcc
Confidence            44555666666664322     2367888999999999999999999998                       2567777


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596         208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE  287 (375)
Q Consensus       208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~  287 (375)
                      |-.||+-.+.+...                   ++++|+..+..|.|+..++++.+.+++..+.+     |+++||+.++
T Consensus       108 Gy~AN~~~i~~l~~-------------------~~dli~~D~lnHASiidG~rls~a~~~~f~Hn-----D~~~Le~~l~  163 (388)
T COG0156         108 GFVANLGLLSALLK-------------------KGDLIFSDELNHASIIDGIRLSRAEVRRFKHN-----DLDHLEALLE  163 (388)
T ss_pred             cchhHHHHHHHhcC-------------------CCcEEEEechhhhhHHHHHHhCCCcEEEecCC-----CHHHHHHHHH
Confidence            88888877765433                   35689999999999999999999999998874     8999999999


Q ss_pred             HhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhh--cCC--CcccEEEEcCcc
Q psy1596         288 RDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWL--AGV--EYANSIAFNPSK  363 (375)
Q Consensus       288 ~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~--~gi--e~aDSi~~d~HK  363 (375)
                      +....+..+.+||.-.-.++.|.+.||++|++++++|+.|+.||.||+.+.+= +.-+...  .|+  +..|.+.-++-|
T Consensus       164 ~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G-~~GrG~~e~~g~~~~~vdi~~gTlsK  242 (388)
T COG0156         164 EARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG-PNGRGLAEHFGLEPEEVDIIVGTLGK  242 (388)
T ss_pred             hhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC-CCCccHHHHhCCCCccceEEEEEchh
Confidence            86644334567777777888999999999999999999999999999998642 2212111  144  346999999999


Q ss_pred             cCC
Q psy1596         364 WLM  366 (375)
Q Consensus       364 ~l~  366 (375)
                      .++
T Consensus       243 AlG  245 (388)
T COG0156         243 ALG  245 (388)
T ss_pred             hhc
Confidence            987

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.48  E-value=5.1e-13  Score=138.00  Aligned_cols=167  Identities=13%  Similarity=-0.004  Sum_probs=117.2

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcE--EEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFI--TFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~G--vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      ...++|+.+.+...++||...                    ...+  +=.++|+.||+.++.+...              
T Consensus        77 ~~d~lE~~~~~~~~~~f~~~~--------------------~~~~~nv~~~SG~~AN~av~~aL~~--------------  122 (475)
T PLN03226         77 YIDQIETLCQKRALEAFRLDP--------------------EKWGVNVQPLSGSPANFAVYTALLQ--------------  122 (475)
T ss_pred             hHHHHHHHHHHHHHHHhCCCc--------------------ceeEEecCcCchHHHHHHHHHHhCC--------------
Confidence            346677777888999998772                    1111  1137999999988877533              


Q ss_pred             hhhhcCceEEEecC------CCchHHHHHHHHcCCeEE----EEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         236 HAEINSRLVAYCSD------QAHSSVEKAGLIGLVKMR----YIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       236 ~~~~~~~~vV~~S~------~aH~Sv~kaa~lg~~~v~----~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                           ++..|++.+      .+|.+...++++....+.    ..+++ ++|.+|+++|++++.+.     .|.+|+++  
T Consensus       123 -----pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~-----~pklIv~~--  190 (475)
T PLN03226        123 -----PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF-----RPKLIIAG--  190 (475)
T ss_pred             -----CCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc-----CCeEEEEe--
Confidence                 345677634      566666666555443322    33444 67999999999998753     24455443  


Q ss_pred             CCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .+.+|..-|+++|.++|+++|.+++||+||+.+.+......   ..++.+|.++.++||||+.|.|..+
T Consensus       191 ~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~---~p~~~~Div~~t~hK~L~GP~Gg~I  256 (475)
T PLN03226        191 ASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA---SPFEYCDVVTTTTHKSLRGPRGGMI  256 (475)
T ss_pred             cCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC---CCCCCCeEEEecCcccccCCCceEE
Confidence            35578888999999999999999999999999876432211   1234689999999999999999444

>PRK15029 arginine decarboxylase; Provisional

Probab=99.48  E-value=4.6e-13  Score=144.06  Aligned_cols=168  Identities=16%  Similarity=0.106  Sum_probs=132.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+..+++||.+         .             .-.+|.|.|.+|+.++.++..                   ++.
T Consensus       208 ~eAq~~aA~~fgA~---------~-------------t~FlvNGST~gn~a~i~a~~~-------------------~gd  246 (755)
T PRK15029        208 GESEKYAARVFGAD---------R-------------SWSVVVGTSGSNRTIMQACMT-------------------DND  246 (755)
T ss_pred             HHHHHHHHHHhCCC---------c-------------EEEEeCChhHHHHHHHHHhcC-------------------CCC
Confidence            67888999999987         2             236677777888877766543                   355


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC--CC---CCcC-----HHHHHHHHHHhhh----cCCccEEEEEEcCCCCcc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD--DK---LSLR-----GDKLIEAIERDKK----KHLIPFFVCGTLGTTGAC  309 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~---g~md-----~e~Le~aI~~~~~----~g~~p~~Vv~t~GtT~tG  309 (375)
                      .|+++..+|-|+..|+.+.+..++.+++.  +.   +.++     ++.++++|++...    .+.+|.+|++|.+ |..|
T Consensus       247 ~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~G  325 (755)
T PRK15029        247 VVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDG  325 (755)
T ss_pred             EEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcc
Confidence            89999999999999999999999988753  21   3355     9999999976431    3456778999987 7889


Q ss_pred             ccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC-------Cccc-EEEEcCcccCCCCCcceee
Q psy1596         310 AFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV-------EYAN-SIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       310 avDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi-------e~aD-Si~~d~HK~l~~P~~~g~l  374 (375)
                      .+-|+++|+++|+++++.||||.|||+...|.|.+... ..+       ..|| .++-|.||+|.+-..+++|
T Consensus       326 v~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~-sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~L  397 (755)
T PRK15029        326 VCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADH-YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYI  397 (755)
T ss_pred             eeeCHHHHHHHHHhcCCeEEEECccccccccCcccccc-ccccccccccCCCceEEEEchhhcccchhhhhhh
Confidence            99999999999999999999999999998888876531 122       3588 9999999999877666654

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.47  E-value=1.1e-12  Score=132.43  Aligned_cols=166  Identities=14%  Similarity=0.101  Sum_probs=131.8

Q ss_pred             CCCCCchh-hhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC
Q psy1596         122 KPTSPFQK-VIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN  200 (375)
Q Consensus       122 ~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~  200 (375)
                      .|+.+.|. ++..+.+.+...+. ..-.       ..|..++++.+.+++.+..|++.+                  ...
T Consensus        37 ~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~-------~~G~~~LReaia~~~~~~~~~~~~------------------~~~   90 (393)
T COG0436          37 EPDFPTPEHIIEAAIEALEEGGT-HYTP-------SAGIPELREAIAEKYKRRYGLDVD------------------PEE   90 (393)
T ss_pred             CCCCCCCHHHHHHHHHHHhcccC-CCCC-------CCCCHHHHHHHHHHHHHHhCCCCC------------------CCC
Confidence            34555555 44444455555432 1112       257788889999999999987631                  223


Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC---CCCCc
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD---DKLSL  277 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d---~~g~m  277 (375)
                      ..++|.|+++|+..++.+..+                   ++..|++++..+.++.....+.|.+++.||++   .++.+
T Consensus        91 eiivt~Ga~~al~~~~~a~~~-------------------pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~  151 (393)
T COG0436          91 EIIVTAGAKEALFLAFLALLN-------------------PGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKP  151 (393)
T ss_pred             eEEEeCCHHHHHHHHHHHhcC-------------------CCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcC
Confidence            489999999999999887654                   45679999999999999999999999999974   48999


Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      |++.|+++|++.++      +|+.+.++|+||++   +.+++|+++|++||+||++|.+|....
T Consensus       152 d~~~l~~~i~~ktk------~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~  209 (393)
T COG0436         152 DLEDLEAAITPKTK------AIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELV  209 (393)
T ss_pred             CHHHHHhhcCccce------EEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcc
Confidence            99999999988543      89999999999998   679999999999999999999998864

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.47  E-value=5e-13  Score=134.08  Aligned_cols=166  Identities=13%  Similarity=-0.020  Sum_probs=113.2

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      +...+++.+.+++++++|.+.                      ..++++|||+++..++.+...                
T Consensus        62 ~~~~l~~~~~~~~~~~~g~~~----------------------~~v~~~sgt~a~~~~l~~l~~----------------  103 (402)
T cd00378          62 YVDEIEDLAIERAKKLFGAEY----------------------ANVQPHSGSQANLAVYFALLE----------------  103 (402)
T ss_pred             HHHHHHHHHHHHHHHHhCCCc----------------------eeeecCCcHHHHHHHHHHhcC----------------
Confidence            345666667889999999871                      135555789999877765422                


Q ss_pred             hhcCceEEEecCCCchHHHHH-----HHHcCCeEEEEecCC---CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc
Q psy1596         238 EINSRLVAYCSDQAHSSVEKA-----GLIGLVKMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC  309 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~ka-----a~lg~~~v~~Vp~d~---~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG  309 (375)
                         ++..|++++.+|.+....     +...|.+++.++.+.   ++.+|+++|++++.+..     +.+|+.+.+  .+|
T Consensus       104 ---~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~-----~~~v~~~~~--~~~  173 (402)
T cd00378         104 ---PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFK-----PKLIVAGAS--AYP  173 (402)
T ss_pred             ---CCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCC-----CCEEEecCc--ccC
Confidence               345788888888655332     333455566666532   68999999999986431     335554443  457


Q ss_pred             ccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         310 AFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       310 avDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ...|+++|+++|+++|+++++|++|..+..........   +..+|.++.++|||+..|.+.+++
T Consensus       174 ~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~~~~dv~~~s~sK~l~G~~gg~i~  235 (402)
T cd00378         174 RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---LPGADVVTTTTHKTLRGPRGGLIL  235 (402)
T ss_pred             CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---ccCCcEEEeccccCCCCCCceEEE
Confidence            77899999999999999999999985543321111111   124699999999999777776654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.45  E-value=7.9e-13  Score=133.60  Aligned_cols=165  Identities=13%  Similarity=0.028  Sum_probs=113.4

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ...+|+.+++++++++|.+.                      .-+++++||+|+..++.+...                 
T Consensus        69 ~~~~e~~~~~~la~~~g~~~----------------------~~i~~~sgt~al~~~l~~l~~-----------------  109 (416)
T PRK00011         69 VDVVEQLAIDRAKELFGAEY----------------------ANVQPHSGSQANAAVYFALLK-----------------  109 (416)
T ss_pred             HHHHHHHHHHHHHHHhCCCc----------------------eeeecCCchHHHHHHHHHhcC-----------------
Confidence            44555667789999999872                      124445678888776654421                 


Q ss_pred             hcCceEEEecCCCchHHHHH---HHHc--CCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         239 INSRLVAYCSDQAHSSVEKA---GLIG--LVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~ka---a~lg--~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                        ++..|+++..+|.++...   ..+.  +.+++.++.+ +++.+|+++|+++|++..     |.+|+.+  .+.+|...
T Consensus       110 --~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~k~v~~~--~~~~~~~~  180 (416)
T PRK00011        110 --PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHK-----PKLIIAG--ASAYSRPI  180 (416)
T ss_pred             --CCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcC-----CCEEEEC--CCcCCCcc
Confidence              345788999998765321   1222  4577788876 468999999999997521     3344443  24567778


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++|+++|+++|+++++|+||+.+......+..   .++.+|.++.++|||+..|.+..++
T Consensus       181 ~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~---~~~~~di~~~S~~K~l~g~~gg~i~  239 (416)
T PRK00011        181 DFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPS---PVPHADVVTTTTHKTLRGPRGGLIL  239 (416)
T ss_pred             CHHHHHHHHHHcCCEEEEECcchhcccccCccCC---CCCCCcEEEecCCcCCCCCCceEEE
Confidence            9999999999999999999999765432211111   1225799999999999777766554

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.45  E-value=2.1e-12  Score=129.62  Aligned_cols=152  Identities=14%  Similarity=0.064  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++|+|||+|+.+++.+..-                  .++.
T Consensus        36 ~~le~~la~~~g~~-----------------------~~v~~~sgt~al~lal~al~~------------------~~Gd   74 (379)
T PRK11658         36 QALEQAFCQLTGNQ-----------------------HAIAVSSATAGMHITLMALGI------------------GPGD   74 (379)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHcCC------------------CCCC
Confidence            67778888888876                       268899999999888865411                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.+...++...|.+++.++++. .+.+|+++|+++|.+.      +.+|+.+   +.+|...|+++|+++|+
T Consensus        75 ~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~------tkav~~~---~~~G~~~d~~~i~~~a~  145 (379)
T PRK11658         75 EVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPR------TKAIIPV---HYAGAPADLDAIRAIGE  145 (379)
T ss_pred             EEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccC------CeEEEEe---CCCCCcCCHHHHHHHHH
Confidence            799999999999888888889999999874 4579999999998653      2355533   45899999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      ++|+++++|+||+.+......  . + |-...+.++++.+|++..+-
T Consensus       146 ~~gi~vi~D~a~a~g~~~~~~--~-~-g~~g~~~~Sf~~~K~l~~g~  188 (379)
T PRK11658        146 RYGIPVIEDAAHAVGTYYKGR--H-I-GARGTAIFSFHAIKNITCAE  188 (379)
T ss_pred             HcCCeEEEECCCccCCeECCe--e-c-CCCCCEEEeCCCCCcCcccC
Confidence            999999999999976543211  1 1 11124788999999886543

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.45  E-value=2e-12  Score=132.15  Aligned_cols=146  Identities=11%  Similarity=0.036  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.++++.|..                       ..++|++||+|+.+++.+...                   ++.
T Consensus        67 ~~le~~lA~l~g~~-----------------------~av~~sSGt~Al~~al~~ll~-------------------~Gd  104 (433)
T PRK08134         67 AVLEERVAALEGGV-----------------------GAIATASGQAALHLAIATLMG-------------------AGS  104 (433)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence            77888899998865                       259999999999988765421                   345


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....+.    -.|.+++.++++     |+++|+++|++.+      .+|++...++++|.+-|+++|++
T Consensus       105 ~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~~~l~~~i~~~T------klV~~e~~~np~g~v~Di~~I~~  173 (433)
T PRK08134        105 HIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-----DIDGWRAAIRPNT------RLLFGETLGNPGLEVLDIPTVAA  173 (433)
T ss_pred             EEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-----CHHHHHHhcCCCC------eEEEEECCCcccCcccCHHHHHH
Confidence            78999999987766542    246788888764     8999999997643      37788888999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|++++||++|+.+....|.    -.   .||.+++|+|||++.+-
T Consensus       174 la~~~gi~livD~t~a~~~~~~pl----~~---GaD~vv~S~tK~l~g~g  216 (433)
T PRK08134        174 IAHEAGVPLLVDSTFTTPYLLRPF----EH---GADLVYHSATKFLGGHG  216 (433)
T ss_pred             HHHHcCCEEEEECCCcccccCCch----hc---CCCEEEeccccccCCCC
Confidence            999999999999999887653321    11   47999999999987654

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.45  E-value=2e-12  Score=128.69  Aligned_cols=173  Identities=16%  Similarity=0.158  Sum_probs=126.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+.+|.+.                   ++...++|+|+++++..++.+...               
T Consensus        61 ~G~~~lr~~la~~~~~~~~~~~-------------------~~~~i~~t~g~~~al~~~~~~l~~---------------  106 (382)
T PRK06108         61 LGIPELREALARYVSRLHGVAT-------------------PPERIAVTSSGVQALMLAAQALVG---------------  106 (382)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCc-------------------CcceEEEeCChHHHHHHHHHHhcC---------------
Confidence            4567788899999999888653                   334688999999998777665422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC---CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~---~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                          ++..|++++.+|..+...+...|.+++.+|.+.   ++.+|+++|++++++.      +.+|+.+.++++||.+  
T Consensus       107 ----~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~p~NPtG~~~~  176 (382)
T PRK06108        107 ----PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPR------TRALFINSPNNPTGWTAS  176 (382)
T ss_pred             ----CCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCcc------ceEEEEECCCCCCCcccC
Confidence                234688899999999888888888999999863   4679999999988542      3467778899999976  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCccc----chhhhhhhcCCCcccEEEEcCcccCCC-CCcceee
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFI----CPEFRKWLAGVEYANSIAFNPSKWLMV-HFDCTAM  374 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~----~~~~~~~~~gie~aDSi~~d~HK~l~~-P~~~g~l  374 (375)
                       +++++|+++|+++|+|+++|.+|+....-    .+.+.... ....-..+..+++|.++. ...+|.+
T Consensus       177 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~RiG~~  244 (382)
T PRK06108        177 RDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIA-EPDDRIIFVNSFSKNWAMTGWRLGWL  244 (382)
T ss_pred             HHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcC-CCcCCEEEEeechhhccCcccceeee
Confidence             56889999999999999999999876432    01111111 111124567799997653 4456665

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.44  E-value=2.8e-12  Score=128.30  Aligned_cols=161  Identities=14%  Similarity=0.141  Sum_probs=119.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++++|||+|+..++.+..-                  .++.
T Consensus        32 ~~le~~la~~~g~~-----------------------~~v~~~sgt~al~~~l~al~~------------------~~Gd   70 (380)
T TIGR03588        32 PAFEEALAEYVGAK-----------------------YAVAFNSATSALHIACLALGV------------------GPGD   70 (380)
T ss_pred             HHHHHHHHHHHCCC-----------------------eEEEEcCHHHHHHHHHHHcCC------------------CCCC
Confidence            56777788888876                       257788999998888765411                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.+...++...|.+++.++++ +++.+|+++|+++|++...  ..+.+|+.+   +.+|...++++|+++|+
T Consensus        71 ~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~--~~t~~v~~~---~~~G~~~~~~~i~~l~~  145 (380)
T TIGR03588        71 RVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKG--KLPKAIVPV---DFAGKSVDMQAIAALAK  145 (380)
T ss_pred             EEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccC--CCceEEEEe---CCCCccCCHHHHHHHHH
Confidence            79999999999998888888899999986 4688999999999974211  123455544   35798999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccCCCCCccee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWLMVHFDCTA  373 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l~~P~~~g~  373 (375)
                      ++|+++++|+||+.+..+..  +. +...+.+|..++++|  ||+..+-|..+
T Consensus       146 ~~~~~lI~D~a~a~g~~~~~--~~-~g~~~~~d~~~~S~~~~K~~~~~~GG~v  195 (380)
T TIGR03588       146 KHGLKIIEDASHALGAEYGG--KP-VGNCRYADATVFSFHPVKIITTAEGGAV  195 (380)
T ss_pred             HcCCEEEEECCCcccCccCC--Ee-CCCccccceEEEecCCCCcccccCceEE
Confidence            99999999999998754321  11 111124699999999  88877644333

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK09082 methionine aminotransferase; Validated

Probab=99.43  E-value=3.5e-12  Score=127.85  Aligned_cols=168  Identities=10%  Similarity=0.019  Sum_probs=126.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++++.+|+.+++|.+.+                  .....++|+|+|+++..++.+...               
T Consensus        67 ~G~~~lr~~~a~~l~~~~~~~~~------------------~~~~i~~t~G~~~al~~~~~~~~~---------------  113 (386)
T PRK09082         67 TGVAALREAIAAKTARLYGRQYD------------------ADSEITVTAGATEALFAAILALVR---------------  113 (386)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCC------------------CCCcEEEeCCHHHHHHHHHHHHcC---------------
Confidence            46778889999999999998631                  112588999999998887765422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                          ++..|+++..+|.++..+++..|.+++.+|.+ +++.+|+++|++++++.      +.+|+.+.++++||.+   +
T Consensus       114 ----~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~  183 (386)
T PRK09082        114 ----PGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVWSAA  183 (386)
T ss_pred             ----CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCCCHH
Confidence                34578899999999999998888899999986 46889999999988642      4467777889999976   8


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ++++|+++|+++++++++|.+|+....-.   +.... +.++..-.-+.-++.|.++.|
T Consensus       184 ~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~-~~~~~~~~i~~~S~SK~~~~~  241 (386)
T PRK09082        184 DMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLR-HPELRERAFVVSSFGKTYHVT  241 (386)
T ss_pred             HHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhh-CcCccCcEEEEeechhhccch
Confidence            89999999999999999999997643211   01111 122222345667889987644

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.42  E-value=4e-12  Score=127.79  Aligned_cols=150  Identities=11%  Similarity=0.039  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..+++++|+.|+..++. ..                   .++.
T Consensus        50 ~~le~~la~l~g~~-----------------------~~l~~~sG~~al~~~l~-ll-------------------~~Gd   86 (378)
T TIGR01329        50 TALESLLAKLDKAD-----------------------RAFAFSSGMAALDVITR-LL-------------------NNGD   86 (378)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHH-Hh-------------------CCCC
Confidence            78889999998876                       25778888876544332 11                   1345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|.+..+.+    ...|.+++.++.+     |+++++++|++.      +.+|+.+.+++++|.+-|+++|++
T Consensus        87 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-----d~~~le~~i~~~------tklv~le~psnptg~v~dl~~I~~  155 (378)
T TIGR01329        87 EIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT-----DLDKVKAALGPK------TKLVLLESPTNPLQKIVDIRKISE  155 (378)
T ss_pred             EEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCeeecHHHHHH
Confidence            7888999998876643    3357788888763     899999998643      448888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|+++|++++||++|+.+....|-    -.   .+|.+..++|||++.|.+  .|++
T Consensus       156 la~~~g~~vivD~a~~~~~~~~~l----~~---g~Di~v~S~tK~l~G~~~~~~G~v  205 (378)
T TIGR01329       156 MAHAQNALVVVDNTMMSPLLCNPL----EL---GADIVYHSATKFLAGHSDVMAGVL  205 (378)
T ss_pred             HHHHcCCEEEEECCCcccccCChh----hc---CCcEEEEecceeccCCccceeEEE
Confidence            999999999999999776432221    11   469999999999999877  7765

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.41  E-value=3.5e-12  Score=126.87  Aligned_cols=169  Identities=15%  Similarity=0.156  Sum_probs=136.2

Q ss_pred             hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ-TTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      ..|..++-.++.+||+++.|++.                       ..++ ..|+++-+++|++.|.+...+        
T Consensus       104 vqG~l~li~~Lq~~L~~ITG~Da-----------------------vsLQP~AGAqGE~aGll~Ir~YHe~r--------  152 (496)
T COG1003         104 VQGYLELIYELQEWLKEITGMDA-----------------------VSLQPNAGAQGEYAGLLAIRAYHESR--------  152 (496)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCce-----------------------eeccCCCCcchhhHHHHHHHHHHHHc--------
Confidence            46778888999999999999982                       2333 367888999999988865332        


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-cc
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DN  313 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dp  313 (375)
                         +...|.++++++.+|-.....+.++|.+|+.|+++++|.+|+++|++++.++++      ++..|.++| .|.+ .+
T Consensus       153 ---G~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~  222 (496)
T COG1003         153 ---GEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAEDNLA------ALMITNPST-LGVFEED  222 (496)
T ss_pred             ---CCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhcccee------EEEeccCcc-cccchhh
Confidence               112466899999999999999999999999999999999999999999986544      788898876 5666 78


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCc--ccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSS--FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~--~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      |.||++|.+++|..+..|||---..  +..|       |-=.+|.+-+|.||++-+|.|.|
T Consensus       223 I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP-------Gd~G~DV~HlNLHKTF~iPHGGG  276 (496)
T COG1003         223 IREICEIVHEAGGQVYYDGANLNAIVGLARP-------GDMGFDVVHLNLHKTFCIPHGGG  276 (496)
T ss_pred             HHHHHHHHHHcCCEEEecCcchhhhhccccc-------cccccceEEeecccccccCCCCC
Confidence            9999999999999999999853321  1122       21246999999999999999876

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.41  E-value=5.9e-12  Score=126.10  Aligned_cols=156  Identities=11%  Similarity=0.068  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .+.+++.+++++.+|.+                       ..++|+|||.|+.+++.++.-                  .
T Consensus        31 ~~~~~~e~~la~~~g~~-----------------------~~v~~~sgt~al~~~l~~~~~------------------~   69 (375)
T PRK11706         31 GFTRRCQQWLEQRFGSA-----------------------KVLLTPSCTAALEMAALLLDI------------------Q   69 (375)
T ss_pred             HHHHHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHhCC------------------C
Confidence            34478889999988775                       378999999998776654310                  1


Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      ++..|+++..+|.++..++...|.+++.+++|++ +.+|+++|+++|++.      +.+|+.+   +.+|...++++|.+
T Consensus        70 ~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~------tk~i~~~---~~~G~~~~~~~i~~  140 (375)
T PRK11706         70 PGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPK------TRAIVPV---HYAGVACEMDTIMA  140 (375)
T ss_pred             CCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCC------CeEEEEe---CCCCCccCHHHHHH
Confidence            3457999999999999999888899999999765 589999999998653      3355554   35898899999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccCCCCCcc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWLMVHFDC  371 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l~~P~~~  371 (375)
                      +|+++|+++++|+||+.+.....  +. ...  ..|.-++|+|  |.+...-+.
T Consensus       141 la~~~~i~vIeD~a~a~g~~~~~--~~-~g~--~~~~~~~Sf~~~K~l~~g~gG  189 (375)
T PRK11706        141 LAKKHNLFVVEDAAQGVMSTYKG--RA-LGT--IGHIGCFSFHETKNYTAGEGG  189 (375)
T ss_pred             HHHHcCCEEEEECccccccccCC--ee-eec--CcCEEEEeCCCCccccccCCe
Confidence            99999999999999998763221  11 111  2355566666  988654333

>PRK08912 hypothetical protein; Provisional

Probab=99.40  E-value=6.8e-12  Score=125.63  Aligned_cols=174  Identities=12%  Similarity=-0.003  Sum_probs=126.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++.+.+|+.+.+|++.                   ++. ..++|+|+++++..++.+..+              
T Consensus        63 ~G~~~lr~~ia~~~~~~~g~~~-------------------~~~~~i~~t~G~~~al~~~~~~~~~--------------  109 (387)
T PRK08912         63 MGLPELRQAVAAHYARFQGLDL-------------------DPETEVMVTSGATEALAAALLALVE--------------  109 (387)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CCcccEEEeCCcHHHHHHHHHHhcC--------------
Confidence            4566778888889988888763                   333 689999999998666654321              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD--  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD--  312 (375)
                           ++..|++++.+|..+...+...|.+++.+|.++ ++.+|+++|++++...      +.+|+.+.++++||.+-  
T Consensus       110 -----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~  178 (387)
T PRK08912        110 -----PGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPR------TKAVLLNNPLNPAGKVFPR  178 (387)
T ss_pred             -----CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCcc------ceEEEEeCCCCCcCcccCH
Confidence                 345788999999999988888888999999864 6789999999988542      34677788999999874  


Q ss_pred             -cHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         313 -NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                       .+++|+++|+++++++++|.+|+....-...+..  .+.++..-+.+..+++|.++.| .-+|.+
T Consensus       179 ~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~  244 (387)
T PRK08912        179 EELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFV  244 (387)
T ss_pred             HHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEE
Confidence             5888999999999999999999754321101111  1122223467889999987643 225543

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.40  E-value=6.3e-12  Score=126.30  Aligned_cols=128  Identities=13%  Similarity=0.108  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      +.++..+++++.+|.+                       ..++|+|||+|+..++.+..                  ..+
T Consensus        32 ~~~~~e~~la~~~g~~-----------------------~~v~~~sgt~aL~~~l~al~------------------~~p   70 (376)
T TIGR02379        32 FSRRCETWLENRTGTK-----------------------KALLTPSCTAALEMAALLLD------------------IQP   70 (376)
T ss_pred             HHHHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHcC------------------CCC
Confidence            3478889999988765                       37999999999877765431                  024


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      +..|+++..+|.+...++...|.+++.+++|++ +.+|+++|++++++.      +.+|+.   ++.+|..-++++|.++
T Consensus        71 Gd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~------tk~Iip---~~~~G~~~d~~~I~~l  141 (376)
T TIGR02379        71 GDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHR------TKAIVP---VHYAGVACDMDTIMAL  141 (376)
T ss_pred             cCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcC------ceEEEE---eCCCCCccCHHHHHHH
Confidence            567999999999999998888899999999865 689999999998653      335554   4567999999999999


Q ss_pred             HHhcCCEEEEecccccCcc
Q psy1596         321 CEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~  339 (375)
                      |+++|+++++|+||+.+..
T Consensus       142 a~~~~i~vIeDaa~~~g~~  160 (376)
T TIGR02379       142 ANKHQLFVIEDAAQGVMST  160 (376)
T ss_pred             HHHCCCEEEEECccccCCc
Confidence            9999999999999998753

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.39  E-value=6.1e-12  Score=128.49  Aligned_cols=161  Identities=16%  Similarity=0.060  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++|+|||+|+..++.+...                   ++.
T Consensus        56 ~~Leeaia~~~g~~-----------------------~vv~t~~Gt~Al~la~~al~~-------------------pGD   93 (431)
T cd00617          56 YDLEDAVQDLFGFK-----------------------HIIPTHQGRGAENILFSILLK-------------------PGR   93 (431)
T ss_pred             HHHHHHHHHHHCCC-----------------------eEEEcCCHHHHHHHHHHHhCC-------------------CCC
Confidence            55666677777776                       379999999999988866432                   234


Q ss_pred             EEEecCCCchHHHH-HHHHcCCeEEEEecCC----------CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-ccc
Q psy1596         244 VAYCSDQAHSSVEK-AGLIGLVKMRYIESDD----------KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-CAF  311 (375)
Q Consensus       244 vV~~S~~aH~Sv~k-aa~lg~~~v~~Vp~d~----------~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-Gav  311 (375)
                      +| ++ ..|+.... ++.+.|.+++.+++++          .|.||+++|+++|++...  ..+.+|+++.+++.+ |.+
T Consensus        94 ~V-~~-~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~  169 (431)
T cd00617          94 TV-PS-NMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQP  169 (431)
T ss_pred             EE-cc-CCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCcc
Confidence            55 44 45655444 4578888999998863          245999999999975411  124467788888877 665


Q ss_pred             ---ccHHHHHHHHHhcCCEEEEecccccC-cccc----hhhh-----hhhc-CCCcccEEEEcCcccCCCCCc
Q psy1596         312 ---DNLEELGPICEKEGLWLHVDAAYAGS-SFIC----PEFR-----KWLA-GVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       312 ---Dpl~eI~~ia~~~~iwlHVDaA~gg~-~~~~----~~~~-----~~~~-gie~aDSi~~d~HK~l~~P~~  370 (375)
                         ++|++|.++|++||+|||.|+|+... +.+.    +.++     .... -...+|++++++||-+.+|.|
T Consensus       170 ~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G  242 (431)
T cd00617         170 VSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG  242 (431)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc
Confidence               57889999999999999999997643 2221    1111     1110 113589999999998888874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.39  E-value=1e-11  Score=129.04  Aligned_cols=181  Identities=15%  Similarity=0.139  Sum_probs=130.5

Q ss_pred             hcchhHHHHHHHHHHHHHcC--CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCc
Q psy1596         156 ILDRDKYSSKVLDFVSKENA--TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPE  233 (375)
Q Consensus       156 ~~g~~~le~~v~~wLa~llG--~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~  233 (375)
                      ..|...+++++.+|+.+..|  .+.                   ++...++|+|+++++.+.+.+..+            
T Consensus        93 ~~G~~~LR~aiA~~l~~~~g~~v~v-------------------~pe~Ivit~Ga~~al~~l~~~l~~------------  141 (496)
T PLN02376         93 YHGLKKFRQAIAHFMGKARGGKVTF-------------------DPERVVMSGGATGANETIMFCLAD------------  141 (496)
T ss_pred             CCCcHHHHHHHHHHHHHHhCCCCcC-------------------ChhhEEEccchHHHHHHHHHHhCC------------
Confidence            35777788999999999888  332                   345689999999998877765432            


Q ss_pred             chhhhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         234 LEHAEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       234 ~~~~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                             ++..|+++...+..+...+. ..|.+++.||++  +++.+|+++|++++++..+.+..+.+|+.+.++++||.
T Consensus       142 -------pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~  214 (496)
T PLN02376        142 -------PGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT  214 (496)
T ss_pred             -------CCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCc
Confidence                   35679999999999998776 478899999984  56789999999987654433445667778899999999


Q ss_pred             c---ccHHHHHHHHHhcCCEEEEecccccCcccchhh---hhhhcCCC----cccE--EEEcCcccCCCC-Ccceee
Q psy1596         311 F---DNLEELGPICEKEGLWLHVDAAYAGSSFICPEF---RKWLAGVE----YANS--IAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       311 v---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~---~~~~~gie----~aDS--i~~d~HK~l~~P-~~~g~l  374 (375)
                      +   +.+++|+++|+++++++++|.+|+....-.+.+   ........    ..|-  +..++.|.++.| +-+|.+
T Consensus       215 ~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~l  291 (496)
T PLN02376        215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIV  291 (496)
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEE
Confidence            8   457788899999999999999999754221111   11111100    0122  357999998655 555554

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.39  E-value=1.7e-11  Score=123.75  Aligned_cols=146  Identities=11%  Similarity=0.054  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..++|+||++|+..++.+...                   ++.
T Consensus        64 ~~le~~la~l~g~~-----------------------~~v~~ssG~~Ai~~al~al~~-------------------~Gd  101 (390)
T PRK08133         64 TMFQERLAALEGAE-----------------------ACVATASGMAAILAVVMALLQ-------------------AGD  101 (390)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            67888899998865                       268999999999988765421                   345


Q ss_pred             EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....    +...|.+++.++++     |+++++++|++.      +.+|+++.+++++|.+.|+++|++
T Consensus       102 ~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~------tklV~ie~p~NptG~v~dl~~I~~  170 (390)
T PRK08133        102 HVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT-----DLDAWRAAVRPN------TKLFFLETPSNPLTELADIAALAE  170 (390)
T ss_pred             EEEEccCcchhHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCCcCCHHHHHH
Confidence            788898888765543    33467788888764     789999988653      347888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|+++++|++|+.+....|    ...   .+|.++.++||+++.+-
T Consensus       171 la~~~gi~livD~t~~~~~~~~p----l~~---g~Divv~S~sK~~~g~g  213 (390)
T PRK08133        171 IAHAAGALLVVDNCFCTPALQQP----LKL---GADVVIHSATKYLDGQG  213 (390)
T ss_pred             HHHHcCCEEEEECCCcccccCCc----hhh---CCcEEEeecceeecCCc
Confidence            99999999999999977654332    111   36999999999987654

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.39  E-value=2.1e-12  Score=129.59  Aligned_cols=152  Identities=11%  Similarity=-0.122  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC-ChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT-TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts-GGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +++++.+++++|.+                    +....+|++ +||+++-.++.....                  .++
T Consensus        51 ~~~r~~l~~l~~~~--------------------~~~~v~~~~gs~T~~~~~~~~~l~~------------------~~~   92 (378)
T PRK03080         51 KRVIEGTRELLSLP--------------------EGYEVGIVPGSDTGAWEMALWSLLG------------------ARR   92 (378)
T ss_pred             HHHHHHHHHHhCCC--------------------CCceEEEECCchHHHHHHHHHhcCC------------------CCc
Confidence            78999999999997                    334578775 889887766644311                  012


Q ss_pred             eEEEecCCCchHHHHH--HHHcCC-eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKA--GLIGLV-KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~ka--a~lg~~-~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      ..++. ...|.+....  ++-.+. +++.++.+..+.+|+++++.     .      ..|+++..+|.+|.+.|+++|++
T Consensus        93 ~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~~-----~------~~V~~~h~~t~tG~~~pi~~I~~  160 (378)
T PRK03080         93 VDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVDF-----D------RDVVFTWNGTTTGVRVPVARWIG  160 (378)
T ss_pred             ceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcCC-----C------CCEEEEecCCccceeccchhhcc
Confidence            23444 4677775443  233356 88888887777888776432     1      14788999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                        +++|++++||++++.+.....     +.   .+|.+.+++||||+.|.|+|++|
T Consensus       161 --~~~g~~~vVDa~qs~G~~pid-----v~---~iD~~~~s~~K~l~~P~G~g~l~  206 (378)
T PRK03080        161 --ADREGLTICDATSAAFALPLD-----WS---KLDVYTFSWQKVLGGEGGHGMAI  206 (378)
T ss_pred             --ccCCCeEEEecccccccCCCC-----HH---HCcEEEEehhhhCCCCCceEEEE
Confidence              889999999999999876432     11   25999999999999999999986

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.39  E-value=2.8e-11  Score=120.01  Aligned_cols=160  Identities=13%  Similarity=0.056  Sum_probs=114.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .+...+..++.+++++++|.+                       ..+++++|+++++.++.+..                
T Consensus        80 ~g~~~~~~~l~~~la~~~~~~-----------------------~~i~~~~g~~~~~~~l~~~~----------------  120 (385)
T PRK05958         80 TGNSPAHEALEEELAEWFGAE-----------------------RALLFSSGYAANLAVLTALA----------------  120 (385)
T ss_pred             cCCcHHHHHHHHHHHHHhCCC-----------------------cEEEECcHHHHHHHHHHHhC----------------
Confidence            344555678899999998854                       35888889998887654321                


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                         .++..|++++..|.+...++.+.+.+++.+|.     .|++.|++.++....   .+.+++.....+.+|.++++++
T Consensus       121 ---~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~---~~~lvi~~~~~~~~G~~~~l~~  189 (385)
T PRK05958        121 ---GKGDLIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRA---GRALIVTESVFSMDGDLAPLAE  189 (385)
T ss_pred             ---CCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccC---CCeEEEEEecccCCCCcCCHHH
Confidence               13457889999999999998888888888875     388999999875311   1345555556778999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCccc-ch-hhhhhhcCCC-ccc-EEEEcCcccCCC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFI-CP-EFRKWLAGVE-YAN-SIAFNPSKWLMV  367 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~-~~-~~~~~~~gie-~aD-Si~~d~HK~l~~  367 (375)
                      |+++|+++|+|+++|++|+.+.+- .. .+.. ..++. ..| .+..++||+++.
T Consensus       190 i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~-~~~~~~~~~~i~~~s~sK~~~~  243 (385)
T PRK05958        190 LVALARRHGAWLLVDEAHGTGVLGPQGRGLAA-EAGLAGEPDVILVGTLGKALGS  243 (385)
T ss_pred             HHHHHHHhCCEEEEECcccccccCCCCCchHH-hhCCCCCCceEEEEechhhccc
Confidence            999999999999999999755321 00 0101 11221 223 567899999864

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.39  E-value=1.3e-11  Score=116.52  Aligned_cols=163  Identities=13%  Similarity=0.066  Sum_probs=138.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ....+.|++++|++.                       .=+|.|+-++-+..+.+...                   +++
T Consensus        64 ~~F~~dlaeFlg~D~-----------------------~R~t~GARe~KfavMhal~~-------------------~gd  101 (382)
T COG1103          64 KDFLEDLAEFLGMDE-----------------------VRVTAGAREAKFAVMHALCK-------------------EGD  101 (382)
T ss_pred             HHHHHHHHHHhCCce-----------------------eeecccchhhHHHHHHHhcc-------------------CCC
Confidence            556667999999982                       46788999988877766543                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcC-CccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKH-LIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g-~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|++...+||+-.-|+...|.++..||..  ++++++++...+.|++-.+++ ..|.+.+.|......|.+.|-+.+++|
T Consensus       102 ~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~i  181 (382)
T COG1103         102 WVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKI  181 (382)
T ss_pred             EEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHH
Confidence            78899999999999999999999999964  578999999999999877764 678899999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++++++.+.+||..+-+...     .+.+ .||+|+-|+||.+-+.-+||+|
T Consensus       182 c~e~gvPlllN~AYt~Grmpvs-----~ke~-g~DFiVgSGHKsmAAs~PiGvl  229 (382)
T COG1103         182 CREYGVPLLLNCAYTVGRMPVS-----GKEI-GADFIVGSGHKSMAASAPIGVL  229 (382)
T ss_pred             HHHcCCceEeecceeecccccc-----cccc-CCCEEEecCccchhccCCeeEE
Confidence            9999999999999999865321     1112 5899999999999999999986

>PRK10534 L-threonine aldolase; Provisional

Probab=99.39  E-value=8.9e-12  Score=121.98  Aligned_cols=160  Identities=19%  Similarity=0.182  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++++||+++++.++.+...                   ++.
T Consensus        37 ~~L~~~la~~~g~~-----------------------~~~v~~~g~~a~~~~l~~~~~-------------------~gd   74 (333)
T PRK10534         37 NALQDYAAELSGKE-----------------------AALFLPTGTQANLVALLSHCE-------------------RGE   74 (333)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCchHHHHHHHHHHhcC-------------------CCC
Confidence            67788889988987                       248999999999988875422                   234


Q ss_pred             EEEecCCCchHHHHH--H-HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHH---HH
Q psy1596         244 VAYCSDQAHSSVEKA--G-LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLE---EL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka--a-~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~---eI  317 (375)
                      .|+++...|.+..++  + .+++.+++.++.++++.+|+++|++++.+...++..+.+|+.+  ++++|.+-+.+   +|
T Consensus        75 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~--np~~G~v~~~~~l~~i  152 (333)
T PRK10534         75 EYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLE--NTHNGKVLPREYLKQA  152 (333)
T ss_pred             eeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEe--cCCCCeecCHHHHHHH
Confidence            577888888654432  3 3455677888888889999999999986432111123345544  44569986554   55


Q ss_pred             HHHHHhcCCEEEEecccccCccc--chhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFI--CPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~--~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +++|+++++|++||+||......  ........   ...|.++++++|.++.+.|
T Consensus       153 ~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~---~~~~~~~~s~SK~~~~~~G  204 (333)
T PRK10534        153 WEFTRERNLALHVDGARIFNAVVAYGCELKEIT---QYCDSFTICLSKGLGTPVG  204 (333)
T ss_pred             HHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH---hcCCEEEEEeEcCCCCccc
Confidence            67899999999999998743210  11111111   2347778899998877743

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.39  E-value=1e-11  Score=124.28  Aligned_cols=168  Identities=11%  Similarity=0.064  Sum_probs=122.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+..|...                   ++...++|+|+++++..++.+...               
T Consensus        68 ~g~~~lr~~ia~~~~~~~~~~~-------------------~~~~i~~~~g~~~a~~~~~~~~~~---------------  113 (393)
T PRK05764         68 AGIPELREAIAAKLKRDNGLDY-------------------DPSQVIVTTGAKQALYNAFMALLD---------------  113 (393)
T ss_pred             CChHHHHHHHHHHHHHHhCCCC-------------------CHHHEEEeCCcHHHHHHHHHHhcC---------------
Confidence            3556777888888877777542                   234589999999998877665422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.+|..+..+++..|.+++.+|.+  +.+.+|+++|++++++.      +.+|+++.+++++|.+   
T Consensus       114 ----~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~  183 (393)
T PRK05764        114 ----PGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPK------TKALILNSPSNPTGAVYSP  183 (393)
T ss_pred             ----CCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCcc------ceEEEEECCCCCCCcccCH
Confidence                23478899999999988888888899999986  35689999999988542      2367778889999987   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +++++|+++|++|++|+++|.+|+....-.+   .......+...-+-+..++.|.++.|
T Consensus       184 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~  243 (393)
T PRK05764        184 EELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMT  243 (393)
T ss_pred             HHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCc
Confidence            6799999999999999999999986532111   11121112222356777899998755

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.39  E-value=1.9e-11  Score=122.79  Aligned_cols=139  Identities=13%  Similarity=0.096  Sum_probs=110.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+++++.+|.+.+                  ++...++|+|+++++..++.+..+               
T Consensus        65 ~G~~~lr~~~~~~l~~~~g~~~~------------------~~~~i~~t~G~~~~l~~~~~~~~~---------------  111 (389)
T PRK05957         65 QGIPPLLEAITQKLQQDNGIELN------------------NEQAIVVTAGSNMAFMNAILAITD---------------  111 (389)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCC------------------CCCeEEEeCChHHHHHHHHHHhcC---------------
Confidence            56667778999999999997621                  134578999999988776654321               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---  313 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---  313 (375)
                          ++..|++++..+......++..|.+++.+|.++++.+|+++|+++|++.      +.+|+.+.++++||.+-+   
T Consensus       112 ----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~klv~~~~p~NPtG~~~~~~~  181 (389)
T PRK05957        112 ----PGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPK------TRAIVTISPNNPTGVVYPEAL  181 (389)
T ss_pred             ----CCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcC------ceEEEEeCCCCCCCcCcCHHH
Confidence                3457888888887777766777889999999888899999999998643      346777889999999865   


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCc
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +++|+++|+++|+++++|.+|+...
T Consensus       182 ~~~i~~~a~~~~~~li~De~y~~~~  206 (389)
T PRK05957        182 LRAVNQICAEHGIYHISDEAYEYFT  206 (389)
T ss_pred             HHHHHHHHHHcCcEEEEeccchhcc
Confidence            9999999999999999999998653

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.38  E-value=1.2e-11  Score=125.79  Aligned_cols=173  Identities=16%  Similarity=0.143  Sum_probs=120.2

Q ss_pred             cccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHH
Q psy1596         147 EADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRK  226 (375)
Q Consensus       147 ~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~  226 (375)
                      +.|.|++.+        .++.+.+++++|++                       ..++|++||.|..++..+.       
T Consensus        65 e~yag~~s~--------~~lE~~va~~~G~~-----------------------~av~v~sGT~Al~ll~~l~-------  106 (450)
T TIGR02618        65 EAYAGSRNF--------YHLERTVRELYGFK-----------------------YVVPTHQGRGAENLLSQIA-------  106 (450)
T ss_pred             hhhcCCCcH--------HHHHHHHHHHHCCC-----------------------eEEEcCCHHHHHHHHHHhC-------
Confidence            457777666        78888899999987                       3799999999955432111       


Q ss_pred             hhccCCcchhhhhcCceEEEecCCCchHHHHH-HHHcCCeEEEEecC----------CCCCcCHHHHHHHHHHhhhcCCc
Q psy1596         227 YQQSHPELEHAEINSRLVAYCSDQAHSSVEKA-GLIGLVKMRYIESD----------DKLSLRGDKLIEAIERDKKKHLI  295 (375)
Q Consensus       227 ~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~d----------~~g~md~e~Le~aI~~~~~~g~~  295 (375)
                                  +.++.+|  +..+|++-.++ ..+.|..++-++.+          .+|.||+++|+++|++... ...
T Consensus       107 ------------l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~~~  171 (450)
T TIGR02618       107 ------------IKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-DKI  171 (450)
T ss_pred             ------------CCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-ccc
Confidence                        0133444  66888888887 46666666666443          3689999999999985322 123


Q ss_pred             cEEEEEEcCCCCc-ccc---ccHHHHHHHHHhcCCEEEEeccccc-Ccccc----hhhhh-----hhcC-CCcccEEEEc
Q psy1596         296 PFFVCGTLGTTGA-CAF---DNLEELGPICEKEGLWLHVDAAYAG-SSFIC----PEFRK-----WLAG-VEYANSIAFN  360 (375)
Q Consensus       296 p~~Vv~t~GtT~t-Gav---Dpl~eI~~ia~~~~iwlHVDaA~gg-~~~~~----~~~~~-----~~~g-ie~aDSi~~d  360 (375)
                      + +|+++..++.. |..   +++++|.++|++||+++|.|||+.. .+++.    +.+..     ..+. ...+|+++++
T Consensus       172 ~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S  250 (450)
T TIGR02618       172 P-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMS  250 (450)
T ss_pred             C-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEe
Confidence            3 45555555544 666   7899999999999999999999988 44442    11211     1111 3468999999


Q ss_pred             CcccCCCCCccee
Q psy1596         361 PSKWLMVHFDCTA  373 (375)
Q Consensus       361 ~HK~l~~P~~~g~  373 (375)
                      +||-.++|.|.-+
T Consensus       251 ~~Kd~~~~~GG~l  263 (450)
T TIGR02618       251 GKKDCLVNIGGFL  263 (450)
T ss_pred             eccCCCCCCceEE
Confidence            9999999996543

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.38  E-value=4.3e-11  Score=121.07  Aligned_cols=167  Identities=11%  Similarity=0.045  Sum_probs=123.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++.+.+|+++.+|.+.                   ++ ...++|+|+++++..++.+..+              
T Consensus        78 ~G~~~LR~aia~~l~~~~g~~~-------------------~~~~~I~it~Ga~~al~~~~~~l~~--------------  124 (405)
T PRK06207         78 RGDADIRELLAARLAAFTGAPV-------------------DAADELIITPGTQGALFLAVAATVA--------------  124 (405)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCCEEEeCCcHHHHHHHHHHhcC--------------
Confidence            4566777899999999999863                   33 5689999999998777665422              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-----CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-----DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-----~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                           ++..|++...++......+...|.+++.|+++     +++.+|+++|++++++.      +.+|+.+.++|+||.
T Consensus       125 -----~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~  193 (405)
T PRK06207        125 -----RGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAG------VRVFLFSNPNNPAGV  193 (405)
T ss_pred             -----CCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhc------CeEEEECCCCCCCCc
Confidence                 34578899999999888888888899999875     35789999999998653      337888889999999


Q ss_pred             cc---cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC-ccc--EEEEcCcccCCCC
Q psy1596         311 FD---NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-YAN--SIAFNPSKWLMVH  368 (375)
Q Consensus       311 vD---pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-~aD--Si~~d~HK~l~~P  368 (375)
                      +-   .+++|+++|+++|+||++|.+|+-...-...+.. +..+. ..|  .+.-++.|.++.|
T Consensus       194 ~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~lp  256 (405)
T PRK06207        194 VYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTH-LRALPIDPENVITIMGPSKTESLS  256 (405)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCc-hhcCCCCcCcEEEEecchhhccCc
Confidence            85   4888999999999999999999875321100000 11110 011  4667889988756

>PRK12414 putative aminotransferase; Provisional

Probab=99.38  E-value=9.6e-12  Score=124.71  Aligned_cols=168  Identities=11%  Similarity=0.049  Sum_probs=123.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+++++|.+.+                  .....++|+||++++..++.+...               
T Consensus        66 ~G~~~lr~~ia~~l~~~~g~~~~------------------~~~~i~it~g~~~al~~~~~~l~~---------------  112 (384)
T PRK12414         66 AGIAALREALAEKTERLYGARYD------------------PASEVTVIASASEGLYAAISALVH---------------  112 (384)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCC------------------CCCcEEEECChHHHHHHHHHHhcC---------------
Confidence            45677778999999999998631                  123589999999998776654321               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                          ++..|++++.+|......++..|.+++.||.+ +++.+|++.|++++++.      +.+|+.+.++++||.+   +
T Consensus       113 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~~s~~  182 (384)
T PRK12414        113 ----PGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPR------TRMIIVNTPHNPSATVFSAA  182 (384)
T ss_pred             ----CCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcCCCHH
Confidence                34578889999988888888778899999987 46789999999988542      4467777899999997   7


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccc-h--hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFIC-P--EFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~-~--~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ++++|+++|+++|+|+++|++|.-...-. +  .... +.++..--.+.-++.|.++.|
T Consensus       183 ~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~-~~~~~~~~i~~~SfSK~~~~p  240 (384)
T PRK12414        183 DLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMAR-HRELAERSVIVSSFGKSYHVT  240 (384)
T ss_pred             HHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCccc-CcCccCcEEEEecccccccCc
Confidence            89999999999999999999998543210 0  0111 111111125777899987644

>PRK07777 aminotransferase; Validated

Probab=99.38  E-value=1.4e-11  Score=123.47  Aligned_cols=168  Identities=11%  Similarity=0.010  Sum_probs=123.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++.+.+|+.+.+|++.                   .+. ..++|+|||+++..++.+...              
T Consensus        61 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~~i~~t~G~~~al~~~~~~~~~--------------  107 (387)
T PRK07777         61 PGIPELRAAIAAQRRRRYGLEY-------------------DPDTEVLVTVGATEAIAAAVLGLVE--------------  107 (387)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEeCCcHHHHHHHHHHhcC--------------
Confidence            4567777888889988888863                   222 588999999998776653321              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC---CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK---LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~---g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-  311 (375)
                           ++..|++....|.++..++.+.+.+++.++.+++   +.+|+++|++++.+.      +.+|+.+.++++||.+ 
T Consensus       108 -----~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~  176 (387)
T PRK07777        108 -----PGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPR------TRALIVNSPHNPTGTVL  176 (387)
T ss_pred             -----CCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcc------cEEEEEcCCCCCCCccC
Confidence                 2346888889998888888888888888988653   579999999988542      3467777888999987 


Q ss_pred             --ccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCCCcccEEEEcCcccCCCC
Q psy1596         312 --DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gie~aDSi~~d~HK~l~~P  368 (375)
                        +++++|+++|+++++++++|.+|+....-...+..  .+.+....+.+..+++|.++.|
T Consensus       177 ~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~  237 (387)
T PRK07777        177 TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVT  237 (387)
T ss_pred             CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCc
Confidence              56999999999999999999999764321110000  1122233467889999998755

>PLN02368 alanine transaminase

Probab=99.38  E-value=1.4e-11  Score=124.98  Aligned_cols=145  Identities=14%  Similarity=0.098  Sum_probs=115.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++++.+|+.+..|++.                   ++...++|+|++++...++.+...               
T Consensus       107 ~G~~~LR~aia~~~~~~~g~~~-------------------~~~~I~it~Ga~~al~~~~~~l~~---------------  152 (407)
T PLN02368        107 RGLPGVRKEVAEFIERRDGYPS-------------------DPELIFLTDGASKGVMQILNAVIR---------------  152 (407)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEcccHHHHHHHHHHHHcC---------------
Confidence            3556777888999988888763                   334689999999998777765431               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                         .++..|++.+.++..+...+.+.|.+++.||+++  ++.+|+++|++++++...++..+.+++.+.++|+||.+   
T Consensus       153 ---~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~  229 (407)
T PLN02368        153 ---GEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSE  229 (407)
T ss_pred             ---CCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCH
Confidence               0345788999999999999988888999999864  47899999999997643333345678888899999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +.+++|+++|++||+||++|.+|+-..
T Consensus       230 e~l~~l~~~a~~~~~~II~DE~Y~~l~  256 (407)
T PLN02368        230 ANLREILKFCYQERLVLLGDEVYQQNI  256 (407)
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccc
Confidence            668888899999999999999998754

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.37  E-value=1.3e-11  Score=126.44  Aligned_cols=146  Identities=10%  Similarity=0.054  Sum_probs=111.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++|+.|+..++.+...                   ++.
T Consensus        72 ~~le~~la~l~g~~-----------------------~~v~fsSG~~Ai~~al~~ll~-------------------~Gd  109 (437)
T PRK05613         72 EALENRIASLEGGV-----------------------HAVAFASGQAAETAAILNLAG-------------------AGD  109 (437)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence            77888899998765                       368888888888776654311                   345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+.....    ...|.+++.++ +.   .|+++|+++|++.+      .+|+....++++|.+-||++|++
T Consensus       110 ~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~---~d~e~l~~~l~~~t------k~V~~e~~~Np~~~v~di~~I~~  179 (437)
T PRK05613        110 HIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-NP---DDPESWQAAVQPNT------KAFFGETFANPQADVLDIPAVAE  179 (437)
T ss_pred             EEEECCCccHHHHHHHHHHHHhcCeEEEEEC-CC---CCHHHHHHhCCccC------eEEEEECCCCCCCcccCHHHHHH
Confidence            7899999999885433    23567888887 32   28999999987643      36667778889999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|+++|+.++||++++.+....|.    -.|   ||.+++++|||++.+
T Consensus       180 la~~~gi~livD~t~a~g~~~~p~----~~G---aDivv~S~~K~l~G~  221 (437)
T PRK05613        180 VAHRNQVPLIVDNTIATAALVRPL----ELG---ADVVVASLTKFYTGN  221 (437)
T ss_pred             HHHHcCCeEEEECCCccccccChH----HhC---CCEEEeeccceecCC
Confidence            999999999999999887654332    224   699999999998654

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.37  E-value=1.4e-11  Score=123.08  Aligned_cols=146  Identities=14%  Similarity=0.100  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++|++|+..++.+...                   ++.
T Consensus        43 ~~le~~la~l~g~~-----------------------~a~~~~sG~~Ai~~~l~~l~~-------------------~gd   80 (369)
T cd00614          43 DALEKKLAALEGGE-----------------------AALAFSSGMAAISTVLLALLK-------------------AGD   80 (369)
T ss_pred             HHHHHHHHHHHCCC-----------------------CEEEEcCHHHHHHHHHHHHcC-------------------CCC
Confidence            77888899988865                       368999999999998876532                   245


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....+    ...+.+++.++.+     |+++|++++++.      +.+|+...+++++|.+.|+++|++
T Consensus        81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~  149 (369)
T cd00614          81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD-----DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAE  149 (369)
T ss_pred             EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHH
Confidence            7888988998776543    3456778888764     588999888542      457888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|++++||++|+.+....|    .-.   .+|.++.+++|+++.+-
T Consensus       150 la~~~g~~livD~t~~~~~~~~~----~~~---g~Divv~S~tK~l~g~~  192 (369)
T cd00614         150 LAHEHGALLVVDNTFATPYLQRP----LEL---GADIVVHSATKYIGGHS  192 (369)
T ss_pred             HHHHcCCEEEEECCCcchhcCCh----hhh---CCcEEEeccceeccCCC
Confidence            99999999999999988654222    111   36999999999998654

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.36  E-value=1.9e-11  Score=122.10  Aligned_cols=162  Identities=11%  Similarity=0.045  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++++++++|.+.                     ...++|+|+|+++..++.+...                   ++.
T Consensus        69 ~~lr~~ia~~l~~~~---------------------~~v~~~~g~t~al~~~~~~~~~-------------------~gd  108 (380)
T PRK06225         69 PELRELILKDLGLDD---------------------DEALITAGATESLYLVMRAFLS-------------------PGD  108 (380)
T ss_pred             HHHHHHHHHhcCCCC---------------------CcEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence            667888889888762                     3689999999998888765421                   234


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC---CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~---~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI  317 (375)
                      .|++++.++......+...|.+++.+|++.   ++.+|+++|++++.+.      +.+|+.+.++++||.+   +++++|
T Consensus       109 ~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~i  182 (380)
T PRK06225        109 NAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDEN------TRLIYLIDPLNPLGSSYTEEEIKEF  182 (380)
T ss_pred             EEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCC------ceEEEEeCCCCCCCcCCCHHHHHHH
Confidence            678888888887777777788899998742   4689999999988643      3367777888999986   679999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +++|+++|+++++|++|+....-.+.... +.  .....+..+++|+++.| .-+|.+
T Consensus       183 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~--~~~~i~~~s~SK~~g~~G~RiG~i  237 (380)
T PRK06225        183 AEIARDNDAFLLHDCTYRDFAREHTLAAE-YA--PEHTVTSYSFSKIFGMAGLRIGAV  237 (380)
T ss_pred             HHHHHHCCcEEEEehhHHHHhccCCchhh-cC--CCCEEEEeechhhcCCccceeEEE
Confidence            99999999999999998643210010000 11  12244556888998644 235654

>PLN02656 tyrosine transaminase

Probab=99.36  E-value=2.4e-11  Score=122.95  Aligned_cols=138  Identities=8%  Similarity=0.080  Sum_probs=109.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+..|.+.                   ++...++|+|+++++..++.+..+               
T Consensus        73 ~G~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~---------------  118 (409)
T PLN02656         73 VGLPQARRAIAEYLSRDLPYKL-------------------SLDDVFITSGCTQAIDVALSMLAR---------------  118 (409)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCC-------------------CcccEEEeCChHHHHHHHHHHHhC---------------
Confidence            3556677888888888777653                   345689999999998777765422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.+|..+...+.+.+.+++.+|++  +++.+|+++|++++++.      +.+|+.+.++++||.+   
T Consensus       119 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~s~  188 (409)
T PLN02656        119 ----PGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQN------TVALVIINPGNPCGNVYSY  188 (409)
T ss_pred             ----CCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccC------ceEEEEECCCCCCCCCCCH
Confidence                34578899999988877777788899999984  35689999999988543      3467777899999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +++++|+++|+++++|+++|++|+...
T Consensus       189 ~~~~~i~~~a~~~~~~ii~De~y~~~~  215 (409)
T PLN02656        189 QHLKKIAETAEKLKILVIADEVYGHLA  215 (409)
T ss_pred             HHHHHHHHHHHHcCCEEEEehhhhhcc
Confidence            789999999999999999999998653

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.36  E-value=1.8e-11  Score=126.59  Aligned_cols=144  Identities=17%  Similarity=0.101  Sum_probs=116.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+..|++.                   ++...++|+|+++++..++.+...               
T Consensus       115 ~G~~~LR~aia~~~~~~~g~~~-------------------~~~~I~it~Ga~~al~~~~~~l~~---------------  160 (481)
T PTZ00377        115 AGYPFVRKAVAAFIERRDGVPK-------------------DPSDIFLTDGASSGIKLLLQLLIG---------------  160 (481)
T ss_pred             cCCHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEcCCHHHHHHHHHHHhcc---------------
Confidence            4667777888999988888774                   345689999999998888765531               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-  313 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-  313 (375)
                         .+++.|++...++.++...+.+.|.+++.||+++  ++.+|+++|++++++..+++..+.+|+.+.++|+||.+-+ 
T Consensus       161 ---~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~  237 (481)
T PTZ00377        161 ---DPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTR  237 (481)
T ss_pred             ---CCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCH
Confidence               0345799999999999999988888999999863  4689999999999865444434656777789999999855 


Q ss_pred             --HHHHHHHHHhcCCEEEEecccccC
Q psy1596         314 --LEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       314 --l~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                        +++|+++|++|++||++|.+|+-.
T Consensus       238 e~~~~i~~~a~~~~~~iI~De~Y~~l  263 (481)
T PTZ00377        238 DVMEEIIKFCYEKGIVLMADEVYQEN  263 (481)
T ss_pred             HHHHHHHHHHHHCCCEEEEehhhHhh
Confidence              899999999999999999999864

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.36  E-value=1.3e-11  Score=125.99  Aligned_cols=177  Identities=12%  Similarity=0.072  Sum_probs=121.2

Q ss_pred             cccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHH
Q psy1596         143 VVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTE  222 (375)
Q Consensus       143 ~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~  222 (375)
                      -+..+.|.||+.+        .++.+.+++++|.+                       ..++|++||.|+.++..+..  
T Consensus        68 ~vGDd~Yagd~s~--------~~LE~~vAe~lG~e-----------------------~aV~v~sGTaAl~ll~~l~v--  114 (460)
T PRK13237         68 MIGDEAYAGSRNF--------YHLEETVQEYYGFK-----------------------HVVPTHQGRGAENLLSRIAI--  114 (460)
T ss_pred             hhcchhhcCCCcH--------HHHHHHHHHHHCCC-----------------------eEEEeCCHHHHHHHHHHhCC--
Confidence            3444567777666        77888888999987                       27999999999887432110  


Q ss_pred             HHHHhhccCCcchhhhhcCceEEEecCCCchHHHHH-HHHcCCeEEEEec----------CCCCCcCHHHHHHHHHHhhh
Q psy1596         223 AIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKA-GLIGLVKMRYIES----------DDKLSLRGDKLIEAIERDKK  291 (375)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~----------d~~g~md~e~Le~aI~~~~~  291 (375)
                                       .++.+|  +..+|.+-.++ ....|...+-+..          ...|.||+++|+++|++...
T Consensus       115 -----------------~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~  175 (460)
T PRK13237        115 -----------------KPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA  175 (460)
T ss_pred             -----------------CCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC
Confidence                             123343  78888888888 4566655544431          24689999999999985422


Q ss_pred             cCCccEEEEEEcCCCCcc-c---cccHHHHHHHHHhcCCEEEEecccccCcc-cc----hhhhhhh-----cC-CCcccE
Q psy1596         292 KHLIPFFVCGTLGTTGAC-A---FDNLEELGPICEKEGLWLHVDAAYAGSSF-IC----PEFRKWL-----AG-VEYANS  356 (375)
Q Consensus       292 ~g~~p~~Vv~t~GtT~tG-a---vDpl~eI~~ia~~~~iwlHVDaA~gg~~~-~~----~~~~~~~-----~g-ie~aDS  356 (375)
                      .  .+.+|+++..++..| .   .+++++|.++|++||+++|.|||+..+.. +.    +.|+..-     +. ...+|.
T Consensus       176 ~--~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~  253 (460)
T PRK13237        176 E--NIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADG  253 (460)
T ss_pred             C--ccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcE
Confidence            1  122455565566664 2   46899999999999999999999987643 22    2232211     11 246899


Q ss_pred             EEEcCcccCCCCCccee
Q psy1596         357 IAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       357 i~~d~HK~l~~P~~~g~  373 (375)
                      +++|+||.+.+|.|..+
T Consensus       254 ~t~S~~K~~~~~~GG~i  270 (460)
T PRK13237        254 CTMSGKKDCLVNIGGFL  270 (460)
T ss_pred             EEEeCCCCCCCCCceEE
Confidence            99999999999985443

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.36  E-value=2.6e-11  Score=120.74  Aligned_cols=163  Identities=12%  Similarity=-0.001  Sum_probs=118.6

Q ss_pred             hhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         155 VILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       155 ~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      ...|...+++++.+++++++|.+                       ..+++++|+++++.++.+..+             
T Consensus        72 ~~~g~~~l~~~l~~~l~~~~g~~-----------------------~~i~~~sG~~a~~~a~~~~~~-------------  115 (385)
T TIGR01825        72 TIAGTLRLHEELEEKLAKFKKTE-----------------------AALVFQSGFNTNQGVLSALLR-------------  115 (385)
T ss_pred             cccCCcHHHHHHHHHHHHHhCCC-----------------------cEEEECcHHHHHHHHHHHhCC-------------
Confidence            44567778899999999998865                       136666778898877665422             


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                            ++.+|++++..|.++..++.+.+.+++.++     .+|+++|++.+++...  ..+.+|+.....+.+|.+.|+
T Consensus       116 ------~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~  182 (385)
T TIGR01825       116 ------KGDIVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPL  182 (385)
T ss_pred             ------CCCEEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCH
Confidence                  345788999999999888887777666554     4799999998876432  124466666667889999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCC-CcccEEEEcCcccCCCC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGV-EYANSIAFNPSKWLMVH  368 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gi-e~aDSi~~d~HK~l~~P  368 (375)
                      ++|+++|++||+|+++|++|+.+.+-.   +....  .++ ...|.+..++||+++.+
T Consensus       183 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~~~  238 (385)
T TIGR01825       183 PEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHH--FGLEDKVDIQVGTLSKAIGVV  238 (385)
T ss_pred             HHHHHHHHHhCCEEEEECcccccCcCCCCCccHhh--cCCCcCCcEEEEeccHHhhcC
Confidence            999999999999999999997653310   00011  122 24688889999998754

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.36  E-value=1.4e-11  Score=125.26  Aligned_cols=164  Identities=12%  Similarity=-0.025  Sum_probs=113.7

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..++|+.+.+.+++++|.+.                      .-+++++||.||+.++.+...                 
T Consensus        72 ~~~lE~~~~~~la~l~g~~~----------------------alv~~~SG~~A~~~~l~al~~-----------------  112 (416)
T PRK13034         72 VDEVEALAIERAKQLFGCDY----------------------ANVQPHSGSQANGAVYLALLK-----------------  112 (416)
T ss_pred             HHHHHHHHHHHHHHHhCCCc----------------------eEEecCCcHHHHHHHHHHhcC-----------------
Confidence            33444444459999998761                      124568999999988876522                 


Q ss_pred             hcCceEEEecCCCchH-HHHHHHH--cCCeE--EEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         239 INSRLVAYCSDQAHSS-VEKAGLI--GLVKM--RYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~S-v~kaa~l--g~~~v--~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                        ++..|+++...|.+ +..+++.  .+...  +.++++ ..+.+|+++|++.++..     .|.+|+.+  .+.+|..-
T Consensus       113 --~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-----~~klVi~~--~~~~g~~~  183 (416)
T PRK13034        113 --PGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH-----KPKLIIAG--FSAYPREL  183 (416)
T ss_pred             --CCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhc-----CCeEEEEC--CCcccccc
Confidence              45689999999988 3334432  22222  344443 35679999999998652     14455443  34567777


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      |+++|.++|+++|++++||+||+.+....+.+   ...+..+|.++.++|||+..|.|..+
T Consensus       184 dl~~l~~la~~~g~~livD~Aha~G~~~~g~~---~~~~~~~Di~~~s~~K~l~g~~GG~v  241 (416)
T PRK13034        184 DFARFREIADEVGALLMVDMAHIAGLVAAGEH---PNPFPHAHVVTTTTHKTLRGPRGGMI  241 (416)
T ss_pred             CHHHHHHHHHHcCCEEEEeCcccccCcccCCC---CCCCCCceEEEEeCcccCCCCCCeEE
Confidence            99999999999999999999999987654321   12335689999999999988887544

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.35  E-value=2.8e-11  Score=120.97  Aligned_cols=156  Identities=16%  Similarity=0.142  Sum_probs=125.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ++..+++++.+|.+                       ..+.+++||.|+.+||++.-                  +.+++
T Consensus        37 ~~FE~~~ae~~G~k-----------------------~ava~~sgT~AL~laL~al~------------------ig~GD   75 (374)
T COG0399          37 RRFEQAFAEYLGVK-----------------------YAVAVSSGTAALHLALLALA------------------IGPGD   75 (374)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEecChHHHHHHHHHhcC------------------CCCCC
Confidence            77888999999987                       36999999999999997532                  12566


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+..+...+....|.+++.|.+| +.+.||++.||++|++.++      +|+..   ...|..-++++|.+||+
T Consensus        76 eVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tK------AIipV---hl~G~~~dm~~i~~la~  146 (374)
T COG0399          76 EVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTK------AIIPV---HLAGQPCDMDAIMALAK  146 (374)
T ss_pred             EEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCe------EEEEe---hhccCCCCHHHHHHHHH
Confidence            89999999999999999999999999998 4599999999999988643      55544   35677779999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhc-CCCcccEEEEcCcccCCCCCcceee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLA-GVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~-gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +||++++.|+|++.++.    |+.+.- .+..+-+++|-++|.+.+- ..|++
T Consensus       147 ~~~l~vIEDaAqa~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav  194 (374)
T COG0399         147 RHGLPVIEDAAQAHGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAV  194 (374)
T ss_pred             HcCCeEEEEcchhccCe----ecCcccccccceEEEEecCCCCcccc-CceEE
Confidence            99999999999999874    333322 3556788999999976543 55554

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.35  E-value=2.7e-11  Score=119.04  Aligned_cols=163  Identities=14%  Similarity=0.043  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++.+++++|.+.                     ...++|+|+|+++..++.+...                   ++.
T Consensus        57 ~~lr~~ia~~~~~~~---------------------~~i~~~~G~~~~l~~~~~~l~~-------------------~gd   96 (346)
T TIGR01141        57 AELKQALADYYGVDP---------------------EQILLGNGSDEIIELLIRAFLE-------------------PGD   96 (346)
T ss_pred             HHHHHHHHHHhCcCh---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence            467777888888651                     3578999999987666554321                   234


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++++.++..+...+...|.+++.+|.++++.+|+++|++++.+.      +.+|+.+.++++||.+-+++++.++|+.
T Consensus        97 ~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~l~~~  170 (346)
T TIGR01141        97 AVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDK------PKLVFLCSPNNPTGNLLSRSDIEAVLER  170 (346)
T ss_pred             EEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence            6888888877666667778889999999888999999999976432      3477788899999999999999999988


Q ss_pred             c--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         324 E--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       324 ~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +  ++++++|++|+..... +.........+ .+.+..+++|+++.| ..+|.+
T Consensus       171 ~~~~~~ii~D~~y~~~~~~-~~~~~~~~~~~-~~i~~~S~sK~~g~~G~r~G~~  222 (346)
T TIGR01141       171 TPEDALVVVDEAYGEFSGE-PSTLPLLAEYP-NLIVLRTLSKAFGLAGLRIGYA  222 (346)
T ss_pred             CCCCcEEEEECchhhhcCC-ccHHHHHhhCC-CEEEEehhhHhhhchhhhceee
Confidence            7  9999999999853211 01111122221 234567889998544 346655

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.35  E-value=2.5e-11  Score=122.39  Aligned_cols=147  Identities=14%  Similarity=0.025  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..++++||+.|+..++.+...                   ++.
T Consensus        56 ~~lE~~lA~l~g~~-----------------------~~l~~~sG~~Ai~~~l~~ll~-------------------~GD   93 (385)
T PRK08574         56 RPLEEALAKLEGGV-----------------------DALAFNSGMAAISTLFFSLLK-------------------AGD   93 (385)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence            77888899998865                       358899999999888765421                   345


Q ss_pred             EEEecCCCchHHHHHHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|+++...|.+....+..   .+.+++.+.      +|+++|+++|++.     .+.+|+...+++++|.+-|+++|+++
T Consensus        94 ~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~------~d~~~l~~~i~~~-----~tklV~ie~p~NPtG~v~dl~~I~~l  162 (385)
T PRK08574         94 RVVLPMEAYGTTLRLLKSLEKFGVKVVLAY------PSTEDIIEAIKEG-----RTKLVFIETMTNPTLKVIDVPEVAKA  162 (385)
T ss_pred             EEEEcCCCchhHHHHHHHhhccCcEEEEEC------CCHHHHHHhcCcc-----CceEEEEECCCCCCCEecCHHHHHHH
Confidence            788999999998877632   345555543      3688899888641     14477788899999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      |+++|+++++|++|+.+....|    +..   .+|.++.++||+++.|-+
T Consensus       163 a~~~gi~livD~t~a~~~~~~~----l~~---GaDivv~S~sK~l~g~~d  205 (385)
T PRK08574        163 AKELGAILVVDNTFATPLLYRP----LRH---GADFVVHSLTKYIAGHND  205 (385)
T ss_pred             HHHcCCEEEEECCCCccccCCh----hhh---CCcEEEeeCceeecCCCC
Confidence            9999999999999987754322    112   369999999999988765

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.35  E-value=8.5e-11  Score=118.77  Aligned_cols=196  Identities=11%  Similarity=-0.016  Sum_probs=131.6

Q ss_pred             cCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC
Q psy1596         121 YKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN  200 (375)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~  200 (375)
                      |.+-.+.+.+...+.+.+.....     ..+.+..+.+......++.+.+++++|.+                       
T Consensus        56 yl~l~~~p~v~~a~~~~~~~~~~-----~~~~s~~~~~~~~~~~~Le~~la~~~g~~-----------------------  107 (410)
T PRK13392         56 YLGMGQHPDVIGAMVDALDRYGA-----GAGGTRNISGTSHPHVLLERELADLHGKE-----------------------  107 (410)
T ss_pred             ccCCCCCHHHHHHHHHHHHHcCC-----CCchhhhcccChHHHHHHHHHHHHHhCCC-----------------------
Confidence            44444445555555555544221     11223333444444478889999999865                       


Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHH
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGD  280 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e  280 (375)
                      ..++.++|++||..++......                 .++.+|+++...|.|+..++.+.+.+++.++.+     |.+
T Consensus       108 ~~i~~~sG~~a~~~~i~~l~~~-----------------~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~  165 (410)
T PRK13392        108 SALLFTSGYVSNDAALSTLGKL-----------------LPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLA  165 (410)
T ss_pred             CEEEECcHHHHHHHHHHHHhcC-----------------CCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHH
Confidence            2577788899998887643210                 123478888889999998888888887777643     667


Q ss_pred             HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhh--hcC-CCcccEE
Q psy1596         281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAG-VEYANSI  357 (375)
Q Consensus       281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~g-ie~aDSi  357 (375)
                      .|++.+++...  ..+.+|+.+.+++++|.+-|+++|.++|+++|+++++|+||+.+.+ .+..+..  ..+ .+..|.+
T Consensus       166 ~l~~~l~~~~~--~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~~g~g~~~~~~~~~~~div  242 (410)
T PRK13392        166 DLEEQLASVDP--DRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY-GARGGGIAERDGLMDRIDMI  242 (410)
T ss_pred             HHHHHHHhccC--CCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc-CCCCCchhhhccCCCCCcEE
Confidence            78887765321  1355788899999999999999999999999999999999995432 1111110  112 2456888


Q ss_pred             EEcCcccCCCCC
Q psy1596         358 AFNPSKWLMVHF  369 (375)
Q Consensus       358 ~~d~HK~l~~P~  369 (375)
                      +.+++|+++.+-
T Consensus       243 ~~tlsK~~g~~G  254 (410)
T PRK13392        243 QGTLAKAFGCLG  254 (410)
T ss_pred             EEEChHhhhccc
Confidence            889999887653

>PRK07682 hypothetical protein; Validated

Probab=99.34  E-value=3e-11  Score=120.47  Aligned_cols=167  Identities=15%  Similarity=0.100  Sum_probs=123.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++++.+|+.+.+|.+.                   ++ ...++|+|+++++..++.+..+              
T Consensus        57 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~~i~~t~G~~~al~~~~~~l~~--------------  103 (378)
T PRK07682         57 AGLLELRQEIAKYLKKRFAVSY-------------------DPNDEIIVTVGASQALDVAMRAIIN--------------  103 (378)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEeCChHHHHHHHHHHhCC--------------
Confidence            4667788899999999888763                   22 3589999999998877654422              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                           ++..|++++.+|..+...+...+.+++.++.+  +++.+|+++|++++.+.      +.+|+.+.++++||.+  
T Consensus       104 -----~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~s  172 (378)
T PRK07682        104 -----PGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAK------TKAILLCSPNNPTGAVLN  172 (378)
T ss_pred             -----CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcc------cEEEEEECCCCCcCcCcC
Confidence                 34578899999998888887777888888874  46789999999988642      3466677899999987  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                       +.+++|+++|++|++++++|.+|+....-.+  .... +.+...-..+.-++.|.++.|
T Consensus       173 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~~~~  231 (378)
T PRK07682        173 KSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFAS-IKGMRERTILISGFSKGFAMT  231 (378)
T ss_pred             HHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhh-cccccCCEEEEecCcccccCh
Confidence             4699999999999999999999987542110  0111 112212246677889998754

>PLN00175 aminotransferase family protein; Provisional

Probab=99.34  E-value=6.2e-11  Score=120.29  Aligned_cols=167  Identities=13%  Similarity=0.113  Sum_probs=123.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++.+.+|+.+..|++.                   ++. ..++|+|+++++..++.+..+              
T Consensus        91 ~G~~~Lr~aia~~~~~~~g~~~-------------------~~~~~I~vt~G~~~al~~~~~~l~~--------------  137 (413)
T PLN00175         91 FGVPELNSAIAERFKKDTGLVV-------------------DPEKEVTVTSGCTEAIAATILGLIN--------------  137 (413)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCCEEEeCCHHHHHHHHHHHhCC--------------
Confidence            3667778889999998888763                   222 578999999998776654321              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                           ++..|++.+..|..+...++..|.+++.|+.+ +++.+|+++|++++...      +.+|+.+.++++||.+   
T Consensus       138 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~------~k~i~i~~p~NPtG~~~s~  206 (413)
T PLN00175        138 -----PGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSK------TRAILINTPHNPTGKMFTR  206 (413)
T ss_pred             -----CCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcC------ceEEEecCCCCCCCcCCCH
Confidence                 34578889999999988888888999999986 45789999999998643      3367778899999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCCCcccEEEEcCcccCCCC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +.+++|+++|++|++|+++|.+|..... .+....  .+.+...-..+..++.|.++.|
T Consensus       207 ~~l~~l~~~a~~~~~~ii~De~Y~~l~~-~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~  264 (413)
T PLN00175        207 EELELIASLCKENDVLAFTDEVYDKLAF-EGDHISMASLPGMYERTVTMNSLGKTFSLT  264 (413)
T ss_pred             HHHHHHHHHHHHcCcEEEEecccCcccc-CCcccChhhCCCCcCcEEEEecchhhccCc
Confidence            5688899999999999999999987542 111100  0112111234557889988644

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.34  E-value=2.3e-11  Score=129.92  Aligned_cols=165  Identities=12%  Similarity=0.111  Sum_probs=128.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .+..+..|++||.+         .             .-.+|.|.|.+|..++.++..                   ++.
T Consensus       198 ~eAe~~aA~~fgAd---------~-------------tyfvvNGTS~~n~av~~a~~~-------------------~Gd  236 (713)
T PRK15399        198 LEAEEYIARTFGAE---------Q-------------SYIVTNGTSTSNKIVGMYAAP-------------------AGS  236 (713)
T ss_pred             HHHHHHHHHHhCCC---------c-------------EEEEeCChHHHHHHHHHHhcC-------------------CCC
Confidence            67888999999987         2             236677778889888877643                   456


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC--C---CCcCH-----HHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD--K---LSLRG-----DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~---g~md~-----e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                      .|+++..+|-|+..++.+.|..++.+++..  .   |.+++     +.++++|++.... ..|..+++|.+ |..|.+-+
T Consensus       237 ~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd  314 (713)
T PRK15399        237 TLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYN  314 (713)
T ss_pred             EEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeC
Confidence            899999999999999999999999887642  2   34555     9999999876432 35788999987 88999999


Q ss_pred             HHHHHHHHHhcCCEE-EEecccccCcccchhhhhh--hcCCCcccEE---EEcCcccCCCCCcceee
Q psy1596         314 LEELGPICEKEGLWL-HVDAAYAGSSFICPEFRKW--LAGVEYANSI---AFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       314 l~eI~~ia~~~~iwl-HVDaA~gg~~~~~~~~~~~--~~gie~aDSi---~~d~HK~l~~P~~~g~l  374 (375)
                      +++|+++|   |+.+ |||.|||+...|.|.++..  +.+...+|.+   +-|.||.|.+-..++++
T Consensus       315 ~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~i  378 (713)
T PRK15399        315 TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLI  378 (713)
T ss_pred             HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheee
Confidence            99999999   6665 8999999998888765422  2222247888   99999999877766654

>PRK08960 hypothetical protein; Provisional

Probab=99.34  E-value=2.7e-11  Score=121.37  Aligned_cols=165  Identities=12%  Similarity=0.027  Sum_probs=119.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+..|++.                   ++...++|+|+++++..++.+...               
T Consensus        69 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~it~G~~~al~~~~~~~~~---------------  114 (387)
T PRK08960         69 RGLPALREAIAGFYAQRYGVDV-------------------DPERILVTPGGSGALLLASSLLVD---------------  114 (387)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------ChhhEEEccCcHHHHHHHHHHhcC---------------
Confidence            4667777888888888878763                   345689999999998776654321               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD--  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD--  312 (375)
                          ++..|++++.+|.+....+...+.+++.||+++  ++.+|+++|++++++.      ..+|+.+.++++||.+-  
T Consensus       115 ----~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~~~  184 (387)
T PRK08960        115 ----PGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNAD------TVGALVASPANPTGTLLSR  184 (387)
T ss_pred             ----CCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCcc------ceEEEEECCCCCCCcCcCH
Confidence                345789999999999998887788899999864  3579999999988653      23667777999999974  


Q ss_pred             -cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         313 -NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                       .+++|+++|+++|+|+++|.+|..... ...... +..+..--.+.-+++|.++.
T Consensus       185 ~~~~~l~~~~~~~~~~li~De~Y~~~~~-~~~~~~-~~~~~~~vi~~~S~SK~~g~  238 (387)
T PRK08960        185 DELAALSQALRARGGHLVVDEIYHGLTY-GVDAAS-VLEVDDDAFVLNSFSKYFGM  238 (387)
T ss_pred             HHHHHHHHHHHHcCCEEEEEcccccccc-CCCCCC-hhhccCCEEEEeecccccCC
Confidence             567788889999999999999976432 111111 11221112456789998753

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.33  E-value=2.5e-11  Score=122.08  Aligned_cols=147  Identities=12%  Similarity=0.071  Sum_probs=111.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++.|.+                       ..++++||++|+..++.+...                   ++.
T Consensus        53 ~~lE~~lA~l~g~~-----------------------~~~~~~sG~~Ai~~al~all~-------------------~GD   90 (377)
T TIGR01324        53 FALQDAMCELEGGA-----------------------GCYLYPSGLAAVTNSILAFVK-------------------AGD   90 (377)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECcHHHHHHHHHHHhcC-------------------CCC
Confidence            66778888887755                       378999999999988865421                   345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+.+....+    ...+.+++.++.+     +.++|+++|++.      +.+|+.+.+++++|.+.||++|++
T Consensus        91 ~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~-----~~e~l~~~i~~~------tklV~lesp~Np~g~~~dl~~I~~  159 (377)
T TIGR01324        91 HVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL-----IGEDIATLIQPN------TKVLFLEAPSSITFEIQDIPAIAK  159 (377)
T ss_pred             EEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCCcHHHHHHHHH
Confidence            7888888886665533    2345666666432     237788887643      448899999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|+|++||++|+.+...-|    ...   .+|.+..+.|||++.+-+
T Consensus       160 la~~~g~~livD~t~a~g~~~~p----l~~---gaDivv~S~tK~l~G~~d  203 (377)
T TIGR01324       160 AARNPGIVIMIDNTWAAGLLFKP----LEH---GVDISIQAGTKYLVGHSD  203 (377)
T ss_pred             HHHHcCCEEEEECCCccccccCc----ccc---CceEEEecCceeccCCCC
Confidence            99999999999999998865432    112   469999999999988765

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.33  E-value=3e-11  Score=121.97  Aligned_cols=147  Identities=11%  Similarity=0.027  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++|+.|+..++.+...                   ++.
T Consensus        62 ~~le~~lA~l~g~~-----------------------~av~~~sG~~Ai~~~l~al~~-------------------~Gd   99 (391)
T TIGR01328        62 SNLEGRIAFLEGTE-----------------------AAVATSSGMGAIAATLLTILK-------------------AGD   99 (391)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            67888899999876                       268999999998877655421                   244


Q ss_pred             EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....    +...|.+++.++.+     |+++++++|.+.      +.+|+...+++++|.+-|+++|++
T Consensus       100 ~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~-----d~e~l~~~i~~~------tklV~le~p~Np~G~v~dl~~I~~  168 (391)
T TIGR01328       100 HLISDECLYGCTFALLEHALTKFGIQVDFINMA-----IPEEVKAHIKDN------TKIVYFETPANPTMKLIDMERVCR  168 (391)
T ss_pred             EEEEecCcchHHHHHHHHHHhcCCeEEEEECCC-----CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHH
Confidence            688888877544333    33456778877764     789999988653      347888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|++++||+||+.+....|    ..   ..+|.++.+++|+++.+-+
T Consensus       169 la~~~gi~livD~a~a~~~~~~~----~~---~g~Divv~S~sK~lgg~g~  212 (391)
T TIGR01328       169 DAHSQGVKVIVDNTFATPMLTNP----VA---LGVDVVVHSATKYIGGHGD  212 (391)
T ss_pred             HHHHcCCEEEEECCCchhccCCc----hh---cCCCEEEccccccccCCCC
Confidence            99999999999999987543211    11   2479999999999987765

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.33  E-value=5.1e-11  Score=117.82  Aligned_cols=169  Identities=15%  Similarity=0.113  Sum_probs=121.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++++.+|+.+..|++.                   ++. ..++|+|++++...++.+..+.          +  
T Consensus        36 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~Iiit~Gs~~ai~~~~~~~~~~----------g--   84 (350)
T TIGR03537        36 LGTKALREAISGWFERRFGVKL-------------------DPDAQVLPSAGSKEAIFHFPLVFIDP----------E--   84 (350)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEcCChHHHHHHHHHHHcCC----------C--
Confidence            4566777889999988888763                   333 6899999999987766544220          0  


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-C-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-D-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                          .++..|+++..++..+..++...|.+++.||.+ + ++.+|+++|++++.+.      +.+|+++.++++||.+-+
T Consensus        85 ----~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~~  154 (350)
T TIGR03537        85 ----EDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEE------TKIVWINYPHNPTGATAP  154 (350)
T ss_pred             ----CCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhc------cEEEEEeCCCCCcCcccC
Confidence                012478899999999999999889999999986 3 4568999999998753      346777789999998755


Q ss_pred             ---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc-cEEEEcCcccCCCC
Q psy1596         314 ---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA-NSIAFNPSKWLMVH  368 (375)
Q Consensus       314 ---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a-DSi~~d~HK~l~~P  368 (375)
                         +++|+++|+++|+++++|.+|+-...-.+.. . ......- .-+..+++|.++.|
T Consensus       155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~-~-~~~~~~~~~i~~~s~SK~~g~~  211 (350)
T TIGR03537       155 RSYLKETIAMCREHGIILCSDECYTEIYFGEPPH-S-ALEVGIENVLAFHSLSKRSGMT  211 (350)
T ss_pred             HHHHHHHHHHHHHcCcEEEEeccccccccCCCCC-c-hhhcCcCCEEEEeecccccCCc
Confidence               8999999999999999999998542211100 0 0111111 23444899987654

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.33  E-value=1.8e-11  Score=130.74  Aligned_cols=164  Identities=10%  Similarity=0.098  Sum_probs=127.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .+..+..|++||.+         .             .-.+|.|.|.+|..++.++..                   ++.
T Consensus       198 ~eAe~~AA~~fgAd---------~-------------tyfvvNGTS~~n~av~~a~~~-------------------~Gd  236 (714)
T PRK15400        198 KEAEEYIARVFNAD---------R-------------SYMVTNGTSTANKIVGMYSAP-------------------AGS  236 (714)
T ss_pred             HHHHHHHHHHhCCC---------c-------------EEEEeCchHHHHHHHHHHhcC-------------------CCC
Confidence            67889999999987         2             235667778888888776543                   356


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC--C---CCcC-----HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD--K---LSLR-----GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~---g~md-----~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                      .|+++..+|-|+..|+.+.|..++.++++.  .   |.++     ++.++++|++.... ..|+.+++|.+ |..|.+-+
T Consensus       237 ~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~p-TYdG~~yd  314 (714)
T PRK15400        237 TVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLYN  314 (714)
T ss_pred             EEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECC-CCccEecC
Confidence            899999999999999999999999987642  2   2345     89999999875432 35778888887 88999999


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC-Ccc---c--EEEEcCcccCCCCCccee
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV-EYA---N--SIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi-e~a---D--Si~~d~HK~l~~P~~~g~  373 (375)
                      +++|+++|+.++  +|||.|||+...|.|.++.. .++ ..+   |  .++-|.||.|.+-..+++
T Consensus       315 ~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~-sam~~ga~~~~~i~vtQStHKtL~alTQaS~  377 (714)
T PRK15400        315 TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASM  377 (714)
T ss_pred             HHHHHHHhCCCC--EEEEccchhhhccCcccCCc-ChhhcCCCCCCceEEEEchhhcccchhHHhH
Confidence            999999999887  79999999998888876421 122 234   5  899999999876555544

>PRK07337 aminotransferase; Validated

Probab=99.33  E-value=3.3e-11  Score=120.67  Aligned_cols=165  Identities=15%  Similarity=0.078  Sum_probs=120.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+..|.+.                   ++...++|+|++++...++.+..+               
T Consensus        67 ~g~~~lr~~ia~~~~~~~~~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~---------------  112 (388)
T PRK07337         67 LGLAPLREAIAAWYARRFGLDV-------------------APERIVVTAGASAALLLACLALVE---------------  112 (388)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------ChHhEEEecCcHHHHHHHHHHhcC---------------
Confidence            4567777888899988888763                   334588999999997766654321               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.+|.+....+...+.+++.+|.++  ++.+|+++|++.+.+.      +.+|+.+.++++||.+   
T Consensus       113 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~  182 (388)
T PRK07337        113 ----RGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGER------TRGVLLASPSNPTGTSIAP  182 (388)
T ss_pred             ----CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCcc------ceEEEEECCCCCCCcCcCH
Confidence                345799999999999888877778899999863  5789999999988643      3366778899999997   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEE-EcCcccCCCC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIA-FNPSKWLMVH  368 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~-~d~HK~l~~P  368 (375)
                      +++++|+++|+++++|+++|.+|..... .+...... .+ ..+.|+ .+++|.++.|
T Consensus       183 ~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~-~~-~~~vi~~~S~SK~~~~~  237 (388)
T PRK07337        183 DELRRIVEAVRARGGFTIVDEIYQGLSY-DAAPVSAL-SL-GDDVITINSFSKYFNMT  237 (388)
T ss_pred             HHHHHHHHHHHHCCCEEEEecccccccc-CCCCcChh-hc-cCCEEEEEechhhcCCc
Confidence            4588899999999999999999986432 11100111 11 124554 4899988544

>PLN02187 rooty/superroot1

Probab=99.32  E-value=6.1e-11  Score=122.26  Aligned_cols=138  Identities=9%  Similarity=0.080  Sum_probs=110.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+.+|++.                   ++...++|+|+++++..++.+..+               
T Consensus       108 ~G~~~lR~aiA~~~~~~~~~~~-------------------~~~~I~it~G~~~al~~~~~~l~~---------------  153 (462)
T PLN02187        108 AGILPARRAVADYMNRDLPHKL-------------------TPEDIFLTAGCNQGIEIVFESLAR---------------  153 (462)
T ss_pred             CChHHHHHHHHHHHHHhcCCCC-------------------CcccEEEeCCHHHHHHHHHHHhcC---------------
Confidence            4566777888888888777663                   445689999999998887765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.++..+...+...|.+++.++..  +++.+|+++|++++++.      +.+|+.+.++++||.+   
T Consensus       154 ----pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~------~~~v~i~nP~NPTG~v~s~  223 (462)
T PLN02187        154 ----PNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADEN------TVAMVVINPNNPCGNVYSH  223 (462)
T ss_pred             ----CCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCC------cEEEEEeCCCCCCCCccCH
Confidence                34578899999988888888888899999873  56889999999887543      3477888899999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +.+++|+++|+++|+||++|.+|+-..
T Consensus       224 e~l~~i~~~a~~~~i~iI~DE~Y~~l~  250 (462)
T PLN02187        224 DHLKKVAETARKLGIMVISDEVYDRTI  250 (462)
T ss_pred             HHHHHHHHHHHHCCCEEEEeccccccc
Confidence            458899999999999999999998743

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.32  E-value=5.4e-11  Score=119.55  Aligned_cols=172  Identities=14%  Similarity=0.045  Sum_probs=122.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+..|++.+                  .....++|+|+|+++..++.+...               
T Consensus        67 ~g~~~lr~~ia~~~~~~~~~~~~------------------~~~~i~it~G~~~al~~~~~~~~~---------------  113 (391)
T PRK07309         67 AGLLELRQAAADFVKEKYNLDYA------------------PENEILVTIGATEALSASLTAILE---------------  113 (391)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCC------------------CCCcEEEeCChHHHHHHHHHHhcC---------------
Confidence            35667778888898887787521                  124689999999998887665421               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                          ++..|++...+|..+...++..|.+++.+|.++ ++.+|+++|++++++..+   .+.+|+.+.++|+||.+   +
T Consensus       114 ----~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~---~~~~i~l~~P~NPtG~~~s~~  186 (391)
T PRK07309        114 ----PGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGD---KLKAVILNYPANPTGVTYSRE  186 (391)
T ss_pred             ----CCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCC---CeEEEEEECCCCCCCcCcCHH
Confidence                244688888999988888888888999999865 467999999999875321   24577778889999986   5


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ++++|+++|++||+++++|++|+....-.+.......-...--.+.-+++|.++.|
T Consensus       187 ~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~  242 (391)
T PRK07309        187 QIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMT  242 (391)
T ss_pred             HHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCc
Confidence            69999999999999999999998654211100000000111125667899987655

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.32  E-value=4.7e-11  Score=120.57  Aligned_cols=147  Identities=12%  Similarity=0.086  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++.|.+                       ..++|+||++|+..++.+...                   ++.
T Consensus        56 ~~Le~~lA~leg~e-----------------------~ivvt~gg~~Ai~~~l~all~-------------------~Gd   93 (388)
T PRK08861         56 GLLEQTLSELESGK-----------------------GAVVTNCGTSALNLWVSALLG-------------------PDD   93 (388)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHHcC-------------------CCC
Confidence            67888899988754                       479999999999888765421                   345


Q ss_pred             EEEecCCCchHHHHHH-H---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG-L---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa-~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++..+|.+..+.+ .   ..+.+++.++.     .|++++++++++.      +.+|+++.+++++|.+-|+++|++
T Consensus        94 ~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-----~d~e~l~~~i~~~------tklV~lesP~NPtG~v~dl~~I~~  162 (388)
T PRK08861         94 LIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-----SDAAALDAALAKK------PKLILLETPSNPLVRVVDIAELCQ  162 (388)
T ss_pred             EEEEcCCchHHHHHHHHHHHhcCCeEEEEECC-----CCHHHHHHhcCcC------CeEEEEECCCCCCCcccCHHHHHH
Confidence            7888888887665543 2   23456666642     5889999888653      448888899999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|++++||.+|+.+....|    .-.   .||.++.++|||++.|-+
T Consensus       163 la~~~gi~vIvDea~~~~~~~~p----l~~---GaDivv~S~tK~l~G~~d  206 (388)
T PRK08861        163 KAKAVGALVAVDNTFLTPVLQKP----LEL---GADFVIHSTTKYINGHSD  206 (388)
T ss_pred             HHHHcCCEEEEECCccccccCCC----ccc---CCCEEEeecceeccCCCc
Confidence            99999999999999987654322    111   479999999999998876

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.32  E-value=1.7e-10  Score=118.71  Aligned_cols=197  Identities=14%  Similarity=0.033  Sum_probs=140.7

Q ss_pred             hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596         128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT  207 (375)
Q Consensus       128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG  207 (375)
                      +++.....+.+++-.     ...+.+..+.|+..+++++.+.|++++|.+                       ..++.++
T Consensus       119 p~v~~a~~~ai~~yG-----~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e-----------------------~all~sS  170 (476)
T PLN02955        119 PTISNAAANAAKEYG-----MGPKGSALICGYTTYHRLLESSLADLKKKE-----------------------DCLVCPT  170 (476)
T ss_pred             HHHHHHHHHHHHHcC-----CCCCCcCccccChHHHHHHHHHHHHHHCCC-----------------------cEEEECC
Confidence            455666666665543     244567788999999999999999999987                       2589999


Q ss_pred             hHHHHHHHHHHHHHHH--HHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHc----CCeEEEEecCCCCCcCHHH
Q psy1596         208 ASESTLICLLAGRTEA--IRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG----LVKMRYIESDDKLSLRGDK  281 (375)
Q Consensus       208 GT~Anl~AL~aar~~~--~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg----~~~v~~Vp~d~~g~md~e~  281 (375)
                      |..||+.++.+.....  .....  .+     ...++..|++.+..|.|+..++++.    +.+++.++.+     |+++
T Consensus       171 Gy~AN~~~i~aL~~~~~~~~~~~--~~-----~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~  238 (476)
T PLN02955        171 GFAANMAAMVAIGSVASLLAASG--KP-----LKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYH  238 (476)
T ss_pred             hHHHHHHHHHHHhhccccccccc--cc-----cCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHH
Confidence            9999998886642100  00000  00     0013457899999999999999886    4677777765     8999


Q ss_pred             HHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhh--hcCC-CcccEEE
Q psy1596         282 LIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAGV-EYANSIA  358 (375)
Q Consensus       282 Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gi-e~aDSi~  358 (375)
                      |++++++...+   ..+||...-.++.|.+-|+++|.++|++||++|+||.||+.+.+ -+.-+..  ..|+ ...|.++
T Consensus       239 Le~~L~~~~~~---~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~-G~~G~G~~e~~g~~~di~ii~  314 (476)
T PLN02955        239 LNSLLSSCKMK---RKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVC-GENGGGVAEEFNCEADVDLCV  314 (476)
T ss_pred             HHHHHHhCCCC---ceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCcee-cCCCCcHHHHhCCCCCCcEEE
Confidence            99999875432   33555555577889999999999999999999999999998754 2211111  1122 3579999


Q ss_pred             EcCcccCCCC
Q psy1596         359 FNPSKWLMVH  368 (375)
Q Consensus       359 ~d~HK~l~~P  368 (375)
                      .++-|.++..
T Consensus       315 ~TLsKA~G~~  324 (476)
T PLN02955        315 GTLSKAAGCH  324 (476)
T ss_pred             EeCccchhcc
Confidence            9999987643

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.32  E-value=6.5e-11  Score=117.05  Aligned_cols=156  Identities=15%  Similarity=0.066  Sum_probs=109.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE-eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF-QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf-tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      .++++.+++++|.+.                     ...++ |+|+++++..++.+...                   ++
T Consensus        72 ~~lr~~ia~~~~~~~---------------------~~i~~~~~Ga~~~i~~~~~~~~~-------------------~g  111 (361)
T PRK00950         72 PELREALSKYTGVPV---------------------ENIIVGGDGMDEVIDTLMRTFID-------------------PG  111 (361)
T ss_pred             HHHHHHHHHHhCCCH---------------------HHEEEeCCCHHHHHHHHHHHhcC-------------------CC
Confidence            566777788888762                     24567 45666665555443211                   23


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      ..|++++.++..+...++..|.+++.+|.++++.+|+++|+++++..      +.+|+.+.++++||.+-++++|.++|+
T Consensus       112 d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~  185 (361)
T PRK00950        112 DEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEK------TKVIFLCTPNNPTGNLIPEEDIRKILE  185 (361)
T ss_pred             CEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccC------CCEEEEeCCCCCCCCCcCHHHHHHHHH
Confidence            46888888777777777778889999998888899999999988542      336777789999999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ++|+++++|++|+...  ...........+. -.+.-++.|.++.|
T Consensus       186 ~~~~~li~De~y~~~~--~~~~~~~~~~~~~-vi~~~S~SK~~g~~  228 (361)
T PRK00950        186 STDALVFVDEAYVEFA--EYDYTPLALEYDN-LIIGRTFSKVFGLA  228 (361)
T ss_pred             HCCcEEEEECchhhhC--ccchHHHHHhcCC-EEEEEeehHhhcCc
Confidence            9999999999997643  1112222222111 12345888987654

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.31  E-value=2.4e-11  Score=129.88  Aligned_cols=168  Identities=14%  Similarity=0.032  Sum_probs=127.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .+..+..+++||.+         .             .-.+|.|.|.+|..++.++..                   ++.
T Consensus       177 ~eAq~~AA~~fgAd---------~-------------tyFlvNGTS~gn~a~i~a~~~-------------------~Gd  215 (720)
T PRK13578        177 KDAQKHAAKVFNAD---------K-------------TYFVLNGTSASNKVVTNALLT-------------------PGD  215 (720)
T ss_pred             HHHHHHHHHHhCCC---------c-------------eEEEeCChhHHHHHHHHHhcC-------------------CCC
Confidence            68899999999987         2             236677778888888877653                   356


Q ss_pred             EEEecCCCchHHHHH-HHHcCCeEEEEecC--CC---CCcCHHH-----HHHHHHHh-h--hcCCcc-EEEEEEcCCCCc
Q psy1596         244 VAYCSDQAHSSVEKA-GLIGLVKMRYIESD--DK---LSLRGDK-----LIEAIERD-K--KKHLIP-FFVCGTLGTTGA  308 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~d--~~---g~md~e~-----Le~aI~~~-~--~~g~~p-~~Vv~t~GtT~t  308 (375)
                      .|++...+|-|+..+ +.+.|..++.++++  +.   |.++++.     |+++|++. .  ++...| .++++|.+ |..
T Consensus       216 ~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYd  294 (720)
T PRK13578        216 LVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYD  294 (720)
T ss_pred             EEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCc
Confidence            899999999999996 68899999988764  22   3456544     99999875 1  122345 57788876 788


Q ss_pred             cccccHHHHHHH-HHhcCCEEEEecccccCcccchhhhhhhc-CC-Cccc----EEEEcCcccCCCCCcceee
Q psy1596         309 CAFDNLEELGPI-CEKEGLWLHVDAAYAGSSFICPEFRKWLA-GV-EYAN----SIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       309 GavDpl~eI~~i-a~~~~iwlHVDaA~gg~~~~~~~~~~~~~-gi-e~aD----Si~~d~HK~l~~P~~~g~l  374 (375)
                      |.+-++++|+++ ++.++ .||||.|||+...|.|.|+.+-. .+ ..+|    .++-|.||.|.+=..++++
T Consensus       295 G~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~L  366 (720)
T PRK13578        295 GTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQI  366 (720)
T ss_pred             ceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhh
Confidence            999999999998 68888 99999999999988886544211 12 3589    9999999998765555543

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.31  E-value=5.4e-11  Score=119.80  Aligned_cols=138  Identities=9%  Similarity=0.066  Sum_probs=110.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++.+.+|+.+..|++.                   ++ ...++|+|++++...++.+..+              
T Consensus        69 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~I~it~G~~~al~~~~~~~~~--------------  115 (399)
T PRK07681         69 SGIQEFHEAVTEYYNNTHNVIL-------------------NADKEVLLLMGSQDGLVHLPMVYAN--------------  115 (399)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CCCCeEEECCCcHHHHHHHHHHhCC--------------
Confidence            5777788899999998888763                   33 4688899999987776654322              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                           ++..|++++.++..+...+...|.+++.||++++  +.+|+++|++++...      +.+|+.+.++++||.+-+
T Consensus       116 -----~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~~~s  184 (399)
T PRK07681        116 -----PGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADK------AKMMILNFPGNPVPAMAH  184 (399)
T ss_pred             -----CCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCcCcCCC
Confidence                 3457899999999998888888899999998743  578999999888542      347778888999999854


Q ss_pred             ---HHHHHHHHHhcCCEEEEecccccCc
Q psy1596         314 ---LEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       314 ---l~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                         +++|+++|+++|+||++|.+|+...
T Consensus       185 ~~~~~~i~~~a~~~~~~iI~De~y~~~~  212 (399)
T PRK07681        185 EDFFKEVIAFAKKHNIIVVHDFAYAEFY  212 (399)
T ss_pred             HHHHHHHHHHHHHcCeEEEEeccchhhe
Confidence               8889999999999999999998653

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.31  E-value=4.3e-11  Score=121.83  Aligned_cols=145  Identities=12%  Similarity=0.096  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..+++++|+.|+..++.+...                   ++.
T Consensus        60 ~~le~~lA~l~g~~-----------------------~~v~~~sG~~Ai~~al~~l~~-------------------~Gd   97 (418)
T TIGR01326        60 DVLEQRIAALEGGV-----------------------AALAVASGQAAITYAILNLAQ-------------------AGD   97 (418)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEEccHHHHHHHHHHHHhC-------------------CCC
Confidence            67888899998865                       369999999999888876532                   234


Q ss_pred             EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+...    .+...|.+++.++.+     |+++|+++|++.      +.+|++..+++++|.+-|+++|++
T Consensus        98 ~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~~~------t~~V~le~p~NPtg~v~dl~~I~~  166 (418)
T TIGR01326        98 NIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD-----DPEEFEKAIDEN------TKAVFAETIGNPAINVPDIEAIAE  166 (418)
T ss_pred             EEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHH
Confidence            67788877754433    334567788888753     889999988653      347777888999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|+++|++++||++|+.+....|    ..   ..+|.++.+++|+++.+
T Consensus       167 la~~~~i~livD~t~~~~~~~~~----l~---~g~Divv~S~sK~l~g~  208 (418)
T TIGR01326       167 VAHAHGVPLIVDNTFATPYLCRP----ID---HGADIVVHSATKYIGGH  208 (418)
T ss_pred             HHHHcCCEEEEECCCchhhcCCc----hh---cCCeEEEECccccccCC
Confidence            99999999999999986533222    11   13799999999998754

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PLN02483 serine palmitoyltransferase

Probab=99.31  E-value=6.3e-11  Score=122.98  Aligned_cols=168  Identities=14%  Similarity=0.033  Sum_probs=119.5

Q ss_pred             CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596         152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH  231 (375)
Q Consensus       152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~  231 (375)
                      .++...|+.....++.+.+++++|.+                       ..++.++|+.+|+.++.+...          
T Consensus       137 ~sr~~~g~~~~~~ele~~lA~~~g~~-----------------------~ai~~~~G~~an~~~i~al~~----------  183 (489)
T PLN02483        137 SSRVDGGTTKLHRELEELVARFVGKP-----------------------AAIVFGMGYATNSTIIPALIG----------  183 (489)
T ss_pred             ccccccCCcHHHHHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHhCC----------
Confidence            44555666677788999999999966                       146667788888865544321          


Q ss_pred             CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcC-------CccEEEEEEcC
Q psy1596         232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKH-------LIPFFVCGTLG  304 (375)
Q Consensus       232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g-------~~p~~Vv~t~G  304 (375)
                               ++..|++++..|.|+..++++.|.+++.++.+     |+++|++.+++....+       ....+|+...-
T Consensus       184 ---------~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v  249 (489)
T PLN02483        184 ---------KGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGI  249 (489)
T ss_pred             ---------CCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCC
Confidence                     34579999999999999999999999999965     6788888887533211       11123444334


Q ss_pred             CCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC--CcccEEEEcCcccCCC
Q psy1596         305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV--EYANSIAFNPSKWLMV  367 (375)
Q Consensus       305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi--e~aDSi~~d~HK~l~~  367 (375)
                      .+++|.+.++++|+++|++||+++++|+||+.+.. -+..+.  ...++  ..+|.+..+++|.++.
T Consensus       250 ~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~  315 (489)
T PLN02483        250 YSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGVDPADVDIMMGTFTKSFGS  315 (489)
T ss_pred             CCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCCCcccCcEEEEecchhccc
Confidence            47889999999999999999999999999986542 111000  01122  3569999999998865

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.31  E-value=5.6e-11  Score=119.86  Aligned_cols=147  Identities=13%  Similarity=0.058  Sum_probs=112.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++.|.+                       .++++++|++|+..++.+...                   ++.
T Consensus        64 ~~Le~~lA~~~g~~-----------------------~~i~~~sG~~Ai~~~l~all~-------------------~Gd  101 (388)
T PRK07811         64 TALEEQLAALEGGA-----------------------YGRAFSSGMAATDCLLRAVLR-------------------PGD  101 (388)
T ss_pred             HHHHHHHHHHhCCC-----------------------ceEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence            67788899988876                       247778899988888766532                   345


Q ss_pred             EEEecCCCchHHHHHH-HH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG-LI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa-~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....+ .+   .+.+++.++.     .|+++|+++|+++      +.+|+++.+++++|.+.|+++|++
T Consensus       102 ~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~-----~d~e~l~~~i~~~------tklV~ie~p~NPtg~~~dl~~I~~  170 (388)
T PRK07811        102 HIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL-----SDLDAVRAAITPR------TKLIWVETPTNPLLSITDIAALAE  170 (388)
T ss_pred             EEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC-----CCHHHHHHhcCcC------CeEEEEECCCCCcceecCHHHHHH
Confidence            7888999998665543 22   2455555553     4899999998653      348888899999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|+++++|++|+.+....|    ...   .+|.++.+++|+++.|-+
T Consensus       171 la~~~gi~lIvD~a~a~~~~~~p----~~~---gaDivv~S~sK~l~g~~~  214 (388)
T PRK07811        171 LAHDAGAKVVVDNTFASPYLQQP----LAL---GADVVVHSTTKYIGGHSD  214 (388)
T ss_pred             HHHHcCCEEEEECCCCccccCCc----hhh---CCcEEEecCceeecCCCC
Confidence            99999999999999987654222    111   479999999999997754

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.31  E-value=1.6e-10  Score=116.46  Aligned_cols=192  Identities=11%  Similarity=-0.012  Sum_probs=132.8

Q ss_pred             CCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE
Q psy1596         125 SPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF  204 (375)
Q Consensus       125 ~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf  204 (375)
                      ...+++...+.+.+.+.+.     ..+.+....|......++.+.+++++|.+                       ..++
T Consensus        59 ~~~p~v~~a~~~~~~~~~~-----~~~~s~~~~g~~~~~~~Le~~la~~~g~~-----------------------~~l~  110 (402)
T TIGR01821        59 GQHPEVLQAMHETLDKYGA-----GAGGTRNISGTNIPHVELEAELADLHGKE-----------------------SALV  110 (402)
T ss_pred             CCCHHHHHHHHHHHHHcCC-----CCcchhhhhCCcHHHHHHHHHHHHHhCCC-----------------------eEEE
Confidence            3345555666555554321     11224444565666688999999999855                       2588


Q ss_pred             eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHH
Q psy1596         205 QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIE  284 (375)
Q Consensus       205 tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~  284 (375)
                      +++|++||..++.+++..                 .++.+|+++...|.|+..++.+.+..++.++.     .|+++|++
T Consensus       111 ~~sG~~an~~ai~~l~~~-----------------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~  168 (402)
T TIGR01821       111 FTSGYVANDATLATLAKI-----------------IPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEK  168 (402)
T ss_pred             ECchHHHHHHHHHHhhCC-----------------CCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHH
Confidence            888999999998776531                 02346777778899999988877777666654     37899999


Q ss_pred             HHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC-CcccEEEEcC
Q psy1596         285 AIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV-EYANSIAFNP  361 (375)
Q Consensus       285 aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi-e~aDSi~~d~  361 (375)
                      .++....  ..+.+|+....++++|.+.|+++|.++|+++|++++||+||+.+.+ .+....  ...++ +..|.+...+
T Consensus       169 ~l~~~~~--~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~-g~~g~g~~~~~~~~~~~div~~t~  245 (402)
T TIGR01821       169 LLQSVDP--NRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY-GPRGGGIAERDGLMHRIDIIEGTL  245 (402)
T ss_pred             HHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-CCCCCccchhccCCCCCeEEEEec
Confidence            8874321  1255788888999999999999999999999999999999985432 121111  01122 3468887899


Q ss_pred             cccCCCCC
Q psy1596         362 SKWLMVHF  369 (375)
Q Consensus       362 HK~l~~P~  369 (375)
                      .|.++.+-
T Consensus       246 sKa~g~~G  253 (402)
T TIGR01821       246 AKAFGVVG  253 (402)
T ss_pred             hhhhccCC
Confidence            99987543

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.31  E-value=5.6e-11  Score=121.34  Aligned_cols=138  Identities=7%  Similarity=0.056  Sum_probs=109.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+++.+-.|++.                   ++...++|+|+|+++.+++.+..+               
T Consensus        94 ~G~~~lr~aia~~~~~~~~~~~-------------------~~~~v~it~G~~~al~l~~~~l~~---------------  139 (430)
T PLN00145         94 VGLLPARRAIAEYLSRDLPYEL-------------------STDDIYLTAGCAQAIEIIMSVLAQ---------------  139 (430)
T ss_pred             ccCHHHHHHHHHHHhhccCCCC-------------------ChhhEEEeCCHHHHHHHHHHHhcC---------------
Confidence            3566677777777777666653                   345689999999998887765421               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-  313 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-  313 (375)
                          ++..|++++.++..+...+.+.+.+++.+++  ++++.+|+++|++++++.      +.+++.+.++++||.+-+ 
T Consensus       140 ----~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~P~NPtG~v~~~  209 (430)
T PLN00145        140 ----PGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADEN------TVAMVIINPNNPCGSVYSY  209 (430)
T ss_pred             ----CCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcC------ceEEEEeCCCCCCCCCCCH
Confidence                3457899999998888888888888888876  356889999999988653      347888889999999865 


Q ss_pred             --HHHHHHHHHhcCCEEEEecccccCc
Q psy1596         314 --LEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       314 --l~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                        +++|+++|+++|+++++|.+|+...
T Consensus       210 ~~l~~i~~~a~~~~i~ii~De~Y~~~~  236 (430)
T PLN00145        210 EHLAKIAETARKLGILVIADEVYDHLT  236 (430)
T ss_pred             HHHHHHHHHHHHcCCEEEEeccchhhc
Confidence              8889999999999999999998643

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.31  E-value=5.2e-11  Score=119.71  Aligned_cols=173  Identities=13%  Similarity=0.059  Sum_probs=122.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++++.+|+.+.+|.+.                   ++. ..++|+|+++++..++.+..+              
T Consensus        73 ~G~~~lr~aia~~~~~~~~~~~-------------------~~~~~i~vt~G~~~al~~~~~~~~~--------------  119 (394)
T PRK05942         73 EGTASFRQAITDWYHRRYGVEL-------------------DPDSEALPLLGSKEGLTHLALAYVN--------------  119 (394)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCc-------------------CCCCeEEEccChHHHHHHHHHHhCC--------------
Confidence            4666788899999998888763                   223 367789999998777654321              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                           ++..|++++.++..+...+...|.+++.||.+.  ++.+|+++|++++.+.      +.+|+.+.++++||.+-+
T Consensus       120 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~P~NPtG~~~s  188 (394)
T PRK05942        120 -----PGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQ------AKILYFNYPSNPTTATAP  188 (394)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcccc------ceEEEEcCCCCCCCCcCC
Confidence                 345799999999988888777788999999863  4579999999988642      447777788999999855


Q ss_pred             ---HHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         314 ---LEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       314 ---l~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                         +++|+++|+++++|+++|++|+-...-.   +.... +.+.....-..-++.|.++ ...-+|.+
T Consensus       189 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~-~~~~~~~~i~~~SfSK~~~~~GlRiG~i  255 (394)
T PRK05942        189 REFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLE-IPGAKDIGVEFHTLSKTYNMAGWRVGFV  255 (394)
T ss_pred             HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhh-CCCccccEEEEecchhccCChhhheeee
Confidence               8899999999999999999998643210   00100 1111112234567779664 33446654

>PRK04311 selenocysteine synthase; Provisional

Probab=99.31  E-value=4.2e-11  Score=123.42  Aligned_cols=158  Identities=11%  Similarity=0.035  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.+++++|.+                       ..+++++|+.|+..++.+. .                   ++.
T Consensus       130 ~~~e~~lA~l~Gae-----------------------~a~vv~sgtaAl~l~l~~l-~-------------------~Gd  166 (464)
T PRK04311        130 RALAALLCALTGAE-----------------------DALVVNNNAAAVLLALNAL-A-------------------AGK  166 (464)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHh-C-------------------CCC
Confidence            57889999999876                       2688999999988777432 1                   234


Q ss_pred             EEEecCCCchHH------HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC--cc--cccc
Q psy1596         244 VAYCSDQAHSSV------EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG--AC--AFDN  313 (375)
Q Consensus       244 vV~~S~~aH~Sv------~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~--tG--avDp  313 (375)
                      .|++|+..|+++      ...+...|.+++.|+++  ...++++++++|.+++      .+|+.+..++.  +|  .+-|
T Consensus       167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~~~T------klV~~vh~sN~~i~G~~~~~d  238 (464)
T PRK04311        167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAINENT------ALLLKVHTSNYRIEGFTKEVS  238 (464)
T ss_pred             EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcCccC------eEEEEEcCCCccccccCCcCC
Confidence            788898877743      22344567888888764  3468999999997653      36666666664  45  5679


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCc----c---cchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSS----F---ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~----~---~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|++||+++++|++.|...    .   -.|.....+.  ..||.+++++|||++.|. +|+++
T Consensus       239 l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~--~GaDiv~fSg~K~LgGp~-~G~i~  304 (464)
T PRK04311        239 LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLA--AGVDLVTFSGDKLLGGPQ-AGIIV  304 (464)
T ss_pred             HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHh--cCCcEEEecCcccccCCc-eEEEE
Confidence            9999999999999999999654321    0   1122222111  147999999999999995 78763

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.31  E-value=4.8e-11  Score=120.63  Aligned_cols=147  Identities=9%  Similarity=0.062  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.++++.|.+                       .+++++|||+|+..++.+...                   ++.
T Consensus        68 ~~Le~~lA~l~g~~-----------------------~~l~~~sgt~Ai~~~l~al~~-------------------~GD  105 (394)
T PRK07050         68 LALAQRLAEIEGGR-----------------------HALLQPSGLAAISLVYFGLVK-------------------AGD  105 (394)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeccHHHHHHHHHHHHhC-------------------CCC
Confidence            67888899988754                       479999999999988876522                   346


Q ss_pred             EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|.+....    +...|.+++.++.+     +.++|+++|++.      +.+|+.+.+++.+|.+.++++|++
T Consensus       106 ~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~-----~~~~l~~~i~~~------tklV~le~p~Np~~~~~di~~I~~  174 (394)
T PRK07050        106 DVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL-----IGAGIADLIQPN------TRLIWLEAPGSVTMEVPDVPAITA  174 (394)
T ss_pred             EEEEecCCcccHHHHHHHHHHhcCeEEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCccHhhHHHHHH
Confidence            799999999876653    34457778777643     457788887543      447888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|+++++|+||+.+...-|    +..|   +|.++.+++|++...-+
T Consensus       175 ia~~~gi~livD~a~a~~~~~~~----l~~G---aDi~v~S~tK~~~g~~~  218 (394)
T PRK07050        175 AARARGVVTAIDNTYSAGLAFKP----FEHG---VDISVQALTKYQSGGSD  218 (394)
T ss_pred             HHHHcCCEEEEECCcccccccCH----HHcC---CeEEEEECCceecCCCC
Confidence            99999999999999988754322    2223   69999999999865543

>PLN02242 methionine gamma-lyase

Probab=99.31  E-value=5.8e-11  Score=121.00  Aligned_cols=147  Identities=13%  Similarity=0.087  Sum_probs=112.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..++|+||++|+..++.+...                   ++.
T Consensus        79 ~~LE~~lA~l~g~~-----------------------~~l~~~sG~~Ai~~al~al~~-------------------~GD  116 (418)
T PLN02242         79 LNLGRQMAALEGTE-----------------------AAYCTASGMSAISSVLLQLCS-------------------SGG  116 (418)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEEccHHHHHHHHHHHHhC-------------------CCC
Confidence            78889999998876                       258999999999988876532                   345


Q ss_pred             EEEecCCCchHHHHHH-----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG-----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa-----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      .|+++...+......+     +..+.+++.++.+     |+++|+++|++.     .+.+|+.+.+++++|.+.|+++|+
T Consensus       117 ~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~-----d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~  186 (418)
T PLN02242        117 HVVASNTLYGGTHALLAHFLPRKCNITTTFVDIT-----DLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELA  186 (418)
T ss_pred             EEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCC-----CHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHH
Confidence            7888888776665544     2345566656542     899999988642     144788889999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      ++|+++|++++||.+|+.. .+.+.  .  .|   +|.+..+++|+++.+-+
T Consensus       187 ~la~~~gi~livDea~~~~-~~~~~--~--~g---~divv~S~SK~l~g~g~  230 (418)
T PLN02242        187 RIAHEKGVTVVVDNTFAPM-VLSPA--R--LG---ADVVVHSISKFISGGAD  230 (418)
T ss_pred             HHHHHhCCEEEEECCCCcc-CCCHH--H--cC---CcEEEEeCccccCCCCC
Confidence            9999999999999999643 23221  1  13   69999999999877654

>PLN02509 cystathionine beta-lyase

Probab=99.31  E-value=3.6e-11  Score=123.85  Aligned_cols=152  Identities=11%  Similarity=0.079  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ..+++.++++++.|-+                       ..+++++|+.++ .++....                   .+
T Consensus       134 t~~aLE~~lA~leg~e-----------------------~ai~~~SG~aAi-~~il~ll-------------------~~  170 (464)
T PLN02509        134 TRDALESLLAKLDKAD-----------------------RAFCFTSGMAAL-SAVTHLI-------------------KN  170 (464)
T ss_pred             HHHHHHHHHHHHhCCC-----------------------EEEEeCcHHHHH-HHHHHHh-------------------CC
Confidence            3488899999987754                       357778887654 3333221                   13


Q ss_pred             ceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      +..|++++..|.+..+.+    ...|.+++.++.     .|+++|+++|.+.      +.+|+++.+++++|.+.||++|
T Consensus       171 GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~-----~d~e~l~~ai~~~------TklV~lesPsNPtG~i~Dl~~I  239 (464)
T PLN02509        171 GEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT-----TNLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKI  239 (464)
T ss_pred             CCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC-----CCHHHHHHhCCcC------CeEEEEECCCCCCCCHHHHHHH
Confidence            457889999998877543    345777777764     3788999888543      3488889999999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +++|+++|++++||+||+.+....|    .  + ..+|.+++++|||+..|-+  +|++
T Consensus       240 ~~lAk~~g~~lIVD~A~a~~~~~~p----l--~-~gaDivv~S~tK~l~G~gdv~gG~v  291 (464)
T PLN02509        240 AEMAHAQGALVLVDNSIMSPVLSRP----L--E-LGADIVMHSATKFIAGHSDVMAGVL  291 (464)
T ss_pred             HHHHHHcCCEEEEECCccccccCCh----h--h-cCCcEEEecCcccccCCCccceeEE
Confidence            9999999999999999987754222    1  1 2479999999999998876  6654

>PRK07550 hypothetical protein; Provisional

Probab=99.30  E-value=8.4e-11  Score=117.72  Aligned_cols=173  Identities=10%  Similarity=-0.036  Sum_probs=121.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+++.+..|...                   .+...++|+|+++++..++.+...               
T Consensus        67 ~G~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~---------------  112 (386)
T PRK07550         67 EGLPELREAYAAHYSRLYGAAI-------------------SPEQVHITSGCNQAFWAAMVTLAG---------------  112 (386)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CcceEEEecCcHHHHHHHHHHhcC---------------
Confidence            4677788888889988888763                   335688899999998776655422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD--  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD--  312 (375)
                          ++..|++++.++......++..|.+++.|+.++  .+.+|+++|++++++.      +.+|+.+.++++||.+-  
T Consensus       113 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~P~NPtG~~~~~  182 (386)
T PRK07550        113 ----AGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPR------TRAIALVTPNNPTGVVYPP  182 (386)
T ss_pred             ----CCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhccc------CcEEEEeCCCCCCCcccCH
Confidence                345789999988887777788889999999963  4668999999999753      33566677899999874  


Q ss_pred             -cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC-cc-cEEEEcCcccCCCC-Cccee
Q psy1596         313 -NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-YA-NSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-~a-DSi~~d~HK~l~~P-~~~g~  373 (375)
                       .+++|+++|+++|+++++|++|+....-.......+...+ .. ..+..+++|.++.| ..+|.
T Consensus       183 ~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~  247 (386)
T PRK07550        183 ELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGA  247 (386)
T ss_pred             HHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEe
Confidence             5889999999999999999999864210000000111100 11 23467999988644 33444

>PLN02231 alanine transaminase

Probab=99.30  E-value=6.1e-11  Score=124.30  Aligned_cols=145  Identities=14%  Similarity=0.101  Sum_probs=118.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+..|++.                   ++...++|+|+++++..++.+...               
T Consensus       168 ~G~~~lReaIA~~~~~r~g~~~-------------------~pe~I~iT~Ga~~ai~~~~~~l~~---------------  213 (534)
T PLN02231        168 QGIKGLRDAIAAGIEARDGFPA-------------------DPNDIFLTDGASPAVHMMMQLLIR---------------  213 (534)
T ss_pred             CCcHHHHHHHHHHHHhccCCCC-------------------CcccEEEeCCHHHHHHHHHHHhcc---------------
Confidence            5777888888999988878774                   445789999999998887766532               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                         .++..|++...++..+..++.+.+.+++.++.++  ++.+|+++|++++++...++..+.+|+.+.++|+||.+   
T Consensus       214 ---~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~  290 (534)
T PLN02231        214 ---SEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAE  290 (534)
T ss_pred             ---CCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCH
Confidence               0245788999999999888888888999999874  47899999999998765555456677778889999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +.+++|+++|++||+||++|.+|.-..
T Consensus       291 e~l~~Iv~~a~~~~l~lI~DEvY~~l~  317 (534)
T PLN02231        291 ENQRDIVEFCKQEGLVLLADEVYQENV  317 (534)
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcc
Confidence            678899999999999999999998753

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.30  E-value=2.9e-11  Score=119.19  Aligned_cols=174  Identities=20%  Similarity=0.179  Sum_probs=122.7

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |...+++.+.+|+.+--|++.                   +....+++++|+.+++..+......               
T Consensus        45 g~~~lr~~ia~~~~~~~~~~~-------------------~~~~~i~~~~G~~~~~~~~~~~~~~---------------   90 (363)
T PF00155_consen   45 GYPELREAIADFLGRRYGVPV-------------------DPEANILVTSGAQAALFLLLRLLKI---------------   90 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHT-------------------TGGEGEEEESHHHHHHHHHHHHHHS---------------
T ss_pred             hhHHHHHHHHHHhhhccCccc-------------------ccceEEEEecccccchhhhhhcccc---------------
Confidence            566666777777775555552                   2221456666666665555443310               


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                        .++..|++.+..|..+...++..+.+++.+|.+  +++.+|+++|++.+++...++..+.+|+.+.++++||.+   +
T Consensus        91 --~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~  168 (363)
T PF00155_consen   91 --NPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLE  168 (363)
T ss_dssp             --STTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HH
T ss_pred             --cccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccc
Confidence              134579999999999999999888889999864  788999999999999866555335678888899999987   5


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhh---hhhhcCCCcccEEEEcCcccCCCC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEF---RKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~---~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      .+.+|+++|++||+|+++|.+|+....-.+.+   ...+..- .---+.-++.|.++.|
T Consensus       169 ~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~  226 (363)
T PF00155_consen  169 ELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDED-DNVIVVGSLSKSFGLP  226 (363)
T ss_dssp             HHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTT-STEEEEEESTTTTTSG
T ss_pred             cccchhhhhcccccceeeeeceeccccCCCccCccccccccc-ccceeeeecccccccc
Confidence            66677777999999999999999976543221   1112211 1136888999987655

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.30  E-value=7.6e-11  Score=118.77  Aligned_cols=147  Identities=9%  Similarity=0.049  Sum_probs=109.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..+++++|+.++..++.+...                   ++.
T Consensus        64 ~~Le~~lA~l~G~~-----------------------~al~~~sG~~Ai~~~l~al~~-------------------~Gd  101 (386)
T PRK06767         64 KLFEERMAVLEGGE-----------------------EALAFGSGMAAISATLIGFLK-------------------AGD  101 (386)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            77888999998865                       258889999887776654321                   345


Q ss_pred             EEEecCCCchHHHHHHH-H---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL-I---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~-l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....+. +   .+.++..++.     .|+++++++|++.      +.+|++..+++++|.+-|+++|++
T Consensus       102 ~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~-----~d~~~l~~~i~~~------tklV~lesp~NptG~v~dl~~I~~  170 (386)
T PRK06767        102 HIICSNGLYGCTYGFLEVLEEKFMITHSFCDM-----ETEADIENKIRPN------TKLIFVETPINPTMKLIDLKQVIR  170 (386)
T ss_pred             EEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC-----CCHHHHHHhhCcC------ceEEEEeCCCCCCceecCHHHHHH
Confidence            78888888877666543 2   2344444433     3889999988643      347888899999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|++++||+||+.+....|    ..   ..+|.++.+++|++..+-+
T Consensus       171 la~~~g~~vivD~a~a~~~~~~p----l~---~g~Div~~S~sK~l~g~g~  214 (386)
T PRK06767        171 VAKRNGLLVIVDNTFCSPYLQRP----LE---LGCDAVVHSATKYIGGHGD  214 (386)
T ss_pred             HHHHcCCEEEEECCCcccccCCc----hh---cCCcEEEecCcceecCCCC
Confidence            99999999999999976543222    11   2469999999999987754

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.30  E-value=2.1e-10  Score=115.81  Aligned_cols=190  Identities=8%  Similarity=-0.010  Sum_probs=128.8

Q ss_pred             hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596         128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT  207 (375)
Q Consensus       128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG  207 (375)
                      +++.....+.+++-.+     ..+.++.+-|+.....++.+.+++++|.+                       ..++.++
T Consensus        15 ~~~~~~~~~a~~~~g~-----~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-----------------------~al~~~s   66 (392)
T PLN03227         15 PTLRQTALESLSHYGC-----GSCGPRGFYGTIDAHLELEQCMAEFLGTE-----------------------SAILYSD   66 (392)
T ss_pred             HHHHHHHHHHHHHhCC-----CCcccccccCChHHHHHHHHHHHHHhCCC-----------------------cEEEecC
Confidence            4556666666655321     12233334555556688889999999876                       2588888


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596         208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE  287 (375)
Q Consensus       208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~  287 (375)
                      |+.+|..++.+...                   ++..|++++..|.|+..++.+.+.+++.++.+     |++++++.++
T Consensus        67 G~~a~~~~i~~l~~-------------------~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-----d~~~l~~~~~  122 (392)
T PLN03227         67 GASTTSSTVAAFAK-------------------RGDLLVVDRGVNEALLVGVSLSRANVRWFRHN-----DMKDLRRVLE  122 (392)
T ss_pred             cHHHHHHHHHHhCC-------------------CCCEEEEeccccHHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHH
Confidence            88888866655321                   45689999999999999988877788777764     4566666554


Q ss_pred             Hhhh--------cCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhh-hcCCCccc
Q psy1596         288 RDKK--------KHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKW-LAGVEYAN  355 (375)
Q Consensus       288 ~~~~--------~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~-~~gie~aD  355 (375)
                      ....        ....+.+|++....+++|.+-|+++|.++|++||+++++|.+|+.+..--   .-..+. +.....+|
T Consensus       123 ~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~D  202 (392)
T PLN03227        123 QVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAE  202 (392)
T ss_pred             HhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCce
Confidence            3221        11235567777777889999999999999999999999999998543210   001110 11124579


Q ss_pred             EEEEcCcccCCCCCc
Q psy1596         356 SIAFNPSKWLMVHFD  370 (375)
Q Consensus       356 Si~~d~HK~l~~P~~  370 (375)
                      .++.+.+|.++ |.+
T Consensus       203 iv~~slsk~~g-~~g  216 (392)
T PLN03227        203 IVTFSLENAFG-SVG  216 (392)
T ss_pred             EEEeechhhhh-ccC
Confidence            99999999865 443

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.30  E-value=6.3e-11  Score=118.19  Aligned_cols=147  Identities=14%  Similarity=0.103  Sum_probs=109.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ++..+.+++++|.+                       .++.+++||.|+.+|+.+..-                  .++.
T Consensus        28 ~~fE~~~a~~~g~~-----------------------~~~~~~sgt~Al~~al~~l~~------------------~~gd   66 (363)
T PF01041_consen   28 EEFEKEFAEYFGVK-----------------------YAVAVSSGTSALHLALRALGL------------------GPGD   66 (363)
T ss_dssp             HHHHHHHHHHHTSS-----------------------EEEEESSHHHHHHHHHHHTTG------------------GTTS
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCChhHHHHHHHHhcCC------------------CcCc
Confidence            77888889998876                       479999999999999887321                  2456


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+..+...++...|.+++.+++| +++.||+++|+++|++.++      +|+++   ...|...++++|.++|+
T Consensus        67 eVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~------ai~~~---h~~G~~~d~~~i~~~~~  137 (363)
T PF01041_consen   67 EVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTK------AILVV---HLFGNPADMDAIRAIAR  137 (363)
T ss_dssp             EEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HHHHHHHHH
T ss_pred             eEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCcc------EEEEe---cCCCCcccHHHHHHHHH
Confidence            89999999999999999999999999998 7899999999999997753      56655   46788889999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccC
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWL  365 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l  365 (375)
                      ++|++++.|+|++.++..    +...-| ...|..++|+|  |.+
T Consensus       138 ~~~i~lIeD~a~a~g~~~----~g~~~G-~~gd~~~fSf~~~K~i  177 (363)
T PF01041_consen  138 KHGIPLIEDAAQAFGARY----KGRPVG-SFGDIAIFSFHPTKII  177 (363)
T ss_dssp             HTT-EEEEE-TTTTT-EE----TTEETT-SSSSEEEEESSTTSSS
T ss_pred             HcCCcEEEccccccCcee----CCEecc-CCCCceEecCCCCCCC
Confidence            999999999999998643    222222 23477777765  766

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.30  E-value=7e-11  Score=120.67  Aligned_cols=147  Identities=12%  Similarity=0.035  Sum_probs=114.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.++++.|.+                       ..+++++|+.|+..++.+...                   ++.
T Consensus        66 ~~le~~lA~l~g~~-----------------------~al~~~SG~~Ai~~al~all~-------------------pGd  103 (427)
T PRK05994         66 AVLEERVAALEGGT-----------------------AALAVASGHAAQFLVFHTLLQ-------------------PGD  103 (427)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHHHHHhC-------------------CCC
Confidence            66788889988765                       268999999999988766532                   345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+..+..    ...+.+++.++.+     |+++|+++|++.      +.+|+++.+++++|.+-|+++|++
T Consensus       104 ~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~ai~~~------tklV~vesp~NptG~v~dl~~I~~  172 (427)
T PRK05994        104 EFIAARKLYGGSINQFGHAFKSFGWQVRWADAD-----DPASFERAITPR------TKAIFIESIANPGGTVTDIAAIAE  172 (427)
T ss_pred             EEEEecCcchhHHHHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHH
Confidence            7888888888665543    3356788887753     889999998653      447888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|++++||++|+.+...-|    ..   ..+|.++.++|||++.+-+
T Consensus       173 la~~~gi~livD~a~a~~~~~~p----l~---~gaDivv~S~tK~lgg~~~  216 (427)
T PRK05994        173 VAHRAGLPLIVDNTLASPYLIRP----IE---HGADIVVHSLTKFLGGHGN  216 (427)
T ss_pred             HHHHcCCEEEEECCccccccCCc----cc---cCCcEEEEcCccccCCCCC
Confidence            99999999999999987643222    11   1479999999999987653

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.29  E-value=6.6e-11  Score=119.94  Aligned_cols=151  Identities=12%  Similarity=0.003  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..+++++|+.|+..++.+..                   .++.
T Consensus        68 ~~le~~lA~l~g~~-----------------------~~i~~~sG~~Al~~~l~~ll-------------------~~Gd  105 (403)
T PRK07503         68 ALLEQRMASLEGGE-----------------------AAVALASGMGAITATLWTLL-------------------RPGD  105 (403)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHHHHHc-------------------CCCC
Confidence            77888899998876                       25888999998777765431                   1345


Q ss_pred             EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.....    .+...|.+++.++.+     |+++|+++|++.      +.+|+...+++++|.+-|+++|++
T Consensus       106 ~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~------tklV~le~p~NPtG~~~di~~I~~  174 (403)
T PRK07503        106 EVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-----DPAALKAAISDK------TRMVYFETPANPNMRLVDIAAVAE  174 (403)
T ss_pred             EEEEccCccchHHHHHHHHHhhCCEEEEEeCCC-----CHHHHHHhcCcc------CcEEEEeCCCCCCCeeeCHHHHHH
Confidence            78888887754333    233456777777764     789999988653      347777889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|+++|+++++|++|+.+....|    .  + -.+|.++.+++|+++.+-+  .|++
T Consensus       175 la~~~gi~lIvD~a~a~~~~~~~----l--~-~g~Di~v~S~tK~l~g~gd~~gG~v  224 (403)
T PRK07503        175 IAHGAGAKVVVDNTYCTPYLQRP----L--E-LGADLVVHSATKYLGGHGDITAGLV  224 (403)
T ss_pred             HHHHcCCEEEEECCCcccccCCc----h--h-hCCCEEEccccccccCCCceeEEEE
Confidence            99999999999999987533211    1  1 1469999999999987654  5654

>PRK08363 alanine aminotransferase; Validated

Probab=99.29  E-value=5.9e-11  Score=119.39  Aligned_cols=172  Identities=9%  Similarity=-0.034  Sum_probs=120.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+..|...                   ++...++|+|+|+++..++.+..+               
T Consensus        70 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~it~G~~~al~~~~~~~~~---------------  115 (398)
T PRK08363         70 EGLPELREAIVKREKRKNGVDI-------------------TPDDVRVTAAVTEALQLIFGALLD---------------  115 (398)
T ss_pred             CCcHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEeCCHHHHHHHHHHHhCC---------------
Confidence            4566777888888877777653                   334689999999998887765422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEE-ecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYI-ESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD--  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~V-p~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD--  312 (375)
                          ++..|++++.+|.++...+...+.+++.+ +.+ +.+.+|+++|++++.+.      +.+|+.+.++++||.+-  
T Consensus       116 ----~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~  185 (398)
T PRK08363        116 ----PGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEK------TKAIAVINPNNPTGALYEK  185 (398)
T ss_pred             ----CCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcc------eEEEEEECCCCCCCcCcCH
Confidence                34578999999999988887767777777 454 34679999999988543      34677788999999874  


Q ss_pred             -cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc-cEE-EEcCcccC-CCCCcceee
Q psy1596         313 -NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA-NSI-AFNPSKWL-MVHFDCTAM  374 (375)
Q Consensus       313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a-DSi-~~d~HK~l-~~P~~~g~l  374 (375)
                       ++++|+++|+++|+++++|++|+.... .+.... ...+... ..+ .-+++|++ ....-+|.+
T Consensus       186 ~~~~~l~~~a~~~~~~li~Deay~~~~~-~~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~  249 (398)
T PRK08363        186 KTLKEILDIAGEHDLPVISDEIYDLMTY-EGKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYI  249 (398)
T ss_pred             HHHHHHHHHHHHcCeEEEEhhhhhhhcc-CCcccC-HHHcCcCCcEEEEecchhccCCccceEEEE
Confidence             499999999999999999999986432 111100 1111111 233 45899984 444555543

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.29  E-value=7.8e-11  Score=118.45  Aligned_cols=146  Identities=10%  Similarity=0.047  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++|++|+..++.+...                   ++.
T Consensus        57 ~~le~~la~l~g~~-----------------------~~~~~~sG~~Ai~~al~al~~-------------------~Gd   94 (380)
T TIGR01325        57 AAFEERIAALEGAE-----------------------RAVATATGMSAIQAALMTLLQ-------------------AGD   94 (380)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            67788899998875                       258899999999988865422                   234


Q ss_pred             EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+...    .+...+.+++.++.+     |+++|++++++.      +.+|+...+++++|.+.|+++|++
T Consensus        95 ~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~~i~~~------tklV~le~p~np~g~~~dl~~I~~  163 (380)
T TIGR01325        95 HVVASRSLFGSTVGFISEILPRFGIEVSFVDPT-----DLNAWEAAVKPN------TKLVFVETPSNPLGELVDIAALAE  163 (380)
T ss_pred             EEEEecCCcchHHHHHHHHHHHhCCEEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCCeeeCHHHHHH
Confidence            57777777755433    233456788888764     788998887543      447888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|++++||++|+.+....| .   -.   .+|.++.++||+++.+-
T Consensus       164 la~~~gi~livD~a~~~~~~~~p-l---~~---g~Divv~S~sK~l~g~g  206 (380)
T TIGR01325       164 LAHAIGALLVVDNVFATPVLQQP-L---KL---GADVVVYSATKHIDGQG  206 (380)
T ss_pred             HHHHcCCEEEEECCCcccccCCc-h---hh---CCCEEEeeccceecCCC
Confidence            99999999999999986543222 1   11   36999999999998763

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.29  E-value=1.4e-10  Score=117.39  Aligned_cols=142  Identities=13%  Similarity=0.090  Sum_probs=106.1

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |..++++.+.+|+.+.++.+.+             .|...++...++|+|+++++..++.+...                
T Consensus        76 G~~~Lr~aia~~~~~~~~~~~~-------------~~~~~~~~~i~it~G~~~al~~~~~~~~~----------------  126 (412)
T PTZ00433         76 GSPEAREAVATYWRNSFVHKES-------------LKSTIKKDNVVLCSGVSHAILMALTALCD----------------  126 (412)
T ss_pred             CcHHHHHHHHHHHHhhcccccc-------------ccCCCChhhEEEeCChHHHHHHHHHHhcC----------------
Confidence            3445557777777765542100             00000345689999999999887765432                


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                         ++..|+++..+|..+...+...|.+++.+|.+  +++.+|+++|++++++.      +.+|+.+.++++||.+   +
T Consensus       127 ---~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~NPtG~~~s~~  197 (412)
T PTZ00433        127 ---EGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDR------TKALIMTNPSNPCGSNFSRK  197 (412)
T ss_pred             ---CCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccC------ceEEEEeCCCCCCCcccCHH
Confidence               34578899999999988888888899999985  35789999999888653      3467788899999975   6


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      ++++|+++|+++|++|++|.+|...
T Consensus       198 ~~~~l~~~a~~~~~~ii~De~y~~~  222 (412)
T PTZ00433        198 HVEDIIRLCEELRLPLISDEIYAGM  222 (412)
T ss_pred             HHHHHHHHHHHcCCeEEEecccccc
Confidence            7888999999999999999999864

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.29  E-value=6.4e-11  Score=119.51  Aligned_cols=150  Identities=9%  Similarity=0.026  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++.|.+                       ..+++++|+.++..++. ...                   ++.
T Consensus        57 ~~le~~lA~l~g~~-----------------------~~v~~~sG~~ai~~~l~-~l~-------------------~Gd   93 (390)
T PRK08064         57 EALEDIIAELEGGT-----------------------KGFAFASGMAAISTAFL-LLS-------------------KGD   93 (390)
T ss_pred             HHHHHHHHHHhCCC-----------------------CeEEECCHHHHHHHHHH-HhC-------------------CCC
Confidence            77888999998865                       24777888877665553 111                   234


Q ss_pred             EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|.+....    +...|.+++.|+.+     |++++++++++.      +.+|+++.+++++|.+-|+++|.+
T Consensus        94 ~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~~~------tklV~l~~p~NptG~~~dl~~I~~  162 (390)
T PRK08064         94 HVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT-----NLEEVAQNIKPN------TKLFYVETPSNPLLKVTDIRGVVK  162 (390)
T ss_pred             EEEEccCccchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCcEeccHHHHHH
Confidence            688888888755543    33467788888864     788898888653      348888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|+++|++++||+||+.+....|.    -.   .+|.++.++|||++.|.+  .|++
T Consensus       163 la~~~g~~vvvD~a~~~~~~~~~~----~~---g~Divv~S~tK~~~G~~~~laG~~  212 (390)
T PRK08064        163 LAKAIGCLTFVDNTFLTPLLQKPL----DL---GADVVLHSATKFLAGHSDVLAGLA  212 (390)
T ss_pred             HHHHcCCEEEEECCCCcccccCch----hh---CCcEEEeecceeccCCccceeEEE
Confidence            999999999999999876543321    11   369999999999988876  4654

>PRK05939 hypothetical protein; Provisional

Probab=99.29  E-value=6.3e-11  Score=119.95  Aligned_cols=145  Identities=14%  Similarity=0.078  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.|+++.|..                       ..+.+++|+.|+..++.+...                   ++.
T Consensus        50 ~~lE~~la~leg~~-----------------------~~v~~ssG~~Ai~~~l~all~-------------------~Gd   87 (397)
T PRK05939         50 AALEAKITKMEGGV-----------------------GTVCFATGMAAIAAVFLTLLR-------------------AGD   87 (397)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHHcC-------------------CCC
Confidence            67788888887765                       257788888888777755421                   345


Q ss_pred             EEEecCCCchH---HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSS---VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~S---v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|++++..|.+   +.+.+...|.+++.++.+     |+++|+++|++.      +.+|+++.+++++|.+.|+++|+++
T Consensus        88 ~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-----d~e~l~~~l~~~------tklV~vesp~NptG~v~dl~~I~~l  156 (397)
T PRK05939         88 HLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-----DVQNVAAAIRPN------TRMVFVETIANPGTQVADLAGIGAL  156 (397)
T ss_pred             EEEECCCccccHHHHHHHHHhcCCEEEEECCC-----CHHHHHHhCCCC------CeEEEEECCCCCCCCHHhHHHHHHH
Confidence            68888887644   344454567788888763     889999998643      4478888999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      |+++|++++||++|+.+..+-|.    ..   .+|.+..++||+++.+
T Consensus       157 a~~~gi~livD~t~a~~~~~~~~----~~---gaDivv~S~sK~~~g~  197 (397)
T PRK05939        157 CRERGLLYVVDNTMTSPWLFRPK----DV---GASLVINSLSKYIAGH  197 (397)
T ss_pred             HHHcCCEEEEECCcccccccCcc----cc---CCEEEEecCeecccCC
Confidence            99999999999999876433221    11   4799999999999865

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.29  E-value=8.9e-11  Score=119.15  Aligned_cols=147  Identities=13%  Similarity=0.047  Sum_probs=109.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.++++.|.+                       ..+++++|++++.+++.+...                   ++.
T Consensus        63 ~~Le~~lA~l~g~~-----------------------~~v~~~sG~~Ai~~~l~all~-------------------pGD  100 (405)
T PRK08776         63 DLLGEALAELEGGA-----------------------GGVITATGMGAINLVLNALLQ-------------------PGD  100 (405)
T ss_pred             HHHHHHHHHHhCCC-----------------------ceEEEcCHHHHHHHHHHHHhC-------------------CCC
Confidence            67788899988765                       258899999887766654421                   345


Q ss_pred             EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++..++......    +...+.+++.++.     .|+++|++++++.      +.+|+++.+++++|.+.++++|++
T Consensus       101 ~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~-----~d~~~l~~~i~~~------tklV~l~~P~NPtG~v~dl~~I~~  169 (405)
T PRK08776        101 TLVVPHDAYGGSWRLFNALAKKGHFALITADL-----TDPRSLADALAQS------PKLVLIETPSNPLLRITDLRFVIE  169 (405)
T ss_pred             EEEEccCCchHHHHHHHHHHHhcCcEEEEECC-----CCHHHHHHhcCcC------CeEEEEECCCCCCCccCCHHHHHH
Confidence            678888888764332    2345667777654     4889999888643      447888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|++++||++|+.+....|    . .  ..+|.+..++||+++.|-+
T Consensus       170 la~~~gi~vIvD~a~a~~~~~~p----l-~--~gaDivv~S~tK~l~g~~~  213 (405)
T PRK08776        170 AAHKVGALTVVDNTFLSPALQKP----L-E--FGADLVLHSTTKYINGHSD  213 (405)
T ss_pred             HHHHcCCEEEEECCCcccccCCc----c-c--ccCCEEEecCceeecCCCC
Confidence            99999999999999987543222    1 1  1479999999999988754

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.29  E-value=1.3e-10  Score=117.26  Aligned_cols=114  Identities=11%  Similarity=0.137  Sum_probs=92.7

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCc
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSL  277 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~m  277 (375)
                      ...++|+|+|+++..++.+..+                   ++..|+++..++..+...+...+.+++.++.+  +++.+
T Consensus        97 ~~ii~t~G~t~al~~~~~~l~~-------------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  157 (403)
T TIGR01265        97 DDVVLTSGCSQAIEICIEALAN-------------------PGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEI  157 (403)
T ss_pred             HHEEEecChHHHHHHHHHHhCC-------------------CCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCcc
Confidence            4589999999999888776532                   23468899999988888777777888888874  45789


Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      |++++++++.+.      +.+|+.+.+++++|.+   +++++|+++|+++|+|+++|++|+...
T Consensus       158 d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~  215 (403)
T TIGR01265       158 DLDGLEALADEK------TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMV  215 (403)
T ss_pred             CHHHHHHHhCcC------ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccc
Confidence            999999988543      3367778889999988   469999999999999999999998754

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.29  E-value=2.2e-10  Score=115.20  Aligned_cols=172  Identities=13%  Similarity=0.027  Sum_probs=121.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+..+.+.                   ++...++|+|+++++..++.+...               
T Consensus        73 ~g~~~lr~~ia~~l~~~~~~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~---------------  118 (394)
T PRK06836         73 AGYPEVREAIAESLNRRFGTPL-------------------TADHIVMTCGAAGALNVALKAILN---------------  118 (394)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CcCcEEEeCChHHHHHHHHHHhcC---------------
Confidence            4566666777778777666542                   334689999999998776654321               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---  312 (375)
                          ++..|++++.++..+...+...+.+++.+|.+++ +.+|+++|++++++.      +.+|+++.++++||.+-   
T Consensus       119 ----~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~~  188 (394)
T PRK06836        119 ----PGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPK------TKAVIINSPNNPTGVVYSEE  188 (394)
T ss_pred             ----CCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcC------ceEEEEeCCCCCCCcCCCHH
Confidence                2457888999998888877777889999999766 789999999998653      34677788999999984   


Q ss_pred             cHHHHHHHHHh------cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596         313 NLEELGPICEK------EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       313 pl~eI~~ia~~------~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                      .+++|+++|++      ||+|+++|.+|+....-...........+ -..+..++.|.++.| .-+|.
T Consensus       189 ~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~pGlRiG~  255 (394)
T PRK06836        189 TLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYD-NSIVVYSFSKSLSLPGERIGY  255 (394)
T ss_pred             HHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccC-cEEEEecchhhccCcceeeEE
Confidence            57778888998      89999999999864321000001111122 246678899988644 34444

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.29  E-value=9.7e-11  Score=118.80  Aligned_cols=146  Identities=9%  Similarity=-0.045  Sum_probs=111.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.|+++.|.+                       ..+++++|+.|+..++.+...                   ++.
T Consensus        73 ~~le~~lA~l~g~~-----------------------~al~~~sG~~Ai~~~l~all~-------------------~Gd  110 (403)
T PRK07810         73 SMFEERLRLIEGAE-----------------------ACFATASGMSAVFTALGALLG-------------------AGD  110 (403)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECChHHHHHHHHHHHhC-------------------CCC
Confidence            67888899998865                       369999999999887765421                   345


Q ss_pred             EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.....    .+...|.+++.++.+     |+++|+++|++.+      .+|++..+++++|.+-|+++|++
T Consensus       111 ~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~ai~~~t------klV~~esp~Nptg~v~dl~~I~~  179 (403)
T PRK07810        111 RLVAARSLFGSCFVVCNEILPRWGVETVFVDGE-----DLSQWEEALSVPT------QAVFFETPSNPMQSLVDIAAVSE  179 (403)
T ss_pred             EEEEccCCcchHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcCc------eEEEEECCCCCCCeecCHHHHHH
Confidence            78888877644333    334457788888743     8999999987643      37888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|++++||++|+.+...-|    +-.   .+|.++.++||++..+-
T Consensus       180 la~~~g~~vivD~a~a~~~~~~~----~~~---gaDivv~S~tK~l~g~g  222 (403)
T PRK07810        180 LAHAAGAKVVLDNVFATPLLQRG----LPL---GADVVVYSGTKHIDGQG  222 (403)
T ss_pred             HHHHcCCEEEEECCCCccccCCh----hhc---CCcEEEccCCceecCCc
Confidence            99999999999999987654322    111   36999999999987643

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.29  E-value=8.6e-11  Score=120.18  Aligned_cols=146  Identities=10%  Similarity=0.044  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.++++.|.+                       ..++|+||+.|+..++.....                   ++.
T Consensus        67 ~~Le~~lA~leg~~-----------------------~al~~~sG~~Ai~~al~~ll~-------------------~GD  104 (431)
T PRK08248         67 DVFEKRIAALEGGI-----------------------GALAVSSGQAAITYSILNIAS-------------------AGD  104 (431)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            67788899988755                       369999999999888865422                   345


Q ss_pred             EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|......    +...|.+++.|+.     .|+++|+++|++.      +.+|+++.+++++|.+-|+++|++
T Consensus       105 ~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~-----~d~e~l~~ai~~~------tklV~l~sp~NPtG~v~di~~I~~  173 (431)
T PRK08248        105 EIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP-----SDPENFEAAITDK------TKALFAETIGNPKGDVLDIEAVAA  173 (431)
T ss_pred             EEEEccCchhhHHHHHHHHHHhCCEEEEEECC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHH
Confidence            788888887654443    3346778888876     3889999988643      347778889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|++++||++|+.+....| .   ..   .+|.++.++|||++.|-
T Consensus       174 la~~~gi~vIvD~t~a~~~~~~p-l---~~---gaDivv~S~tK~lgg~g  216 (431)
T PRK08248        174 IAHEHGIPLIVDNTFASPYLLRP-I---EH---GADIVVHSATKFIGGHG  216 (431)
T ss_pred             HHHHcCCEEEEeCCCCccccCCh-h---Hc---CCCEEEEcCccccCCCC
Confidence            99999999999999986543332 1   12   37999999999998774

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.29  E-value=6.1e-11  Score=121.91  Aligned_cols=158  Identities=11%  Similarity=0.005  Sum_probs=110.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.+++++|.+                       ..+++++|+.|++.++.+. .                   ++.
T Consensus       125 ~~le~~lA~l~gae-----------------------~alvv~sg~aAi~l~l~~l-~-------------------~Gd  161 (454)
T TIGR00474       125 SHVEGLLCELTGAE-----------------------DALVVNNNAAAVLLALNTL-A-------------------KGK  161 (454)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHh-C-------------------CcC
Confidence            77889999999986                       1477888999987777431 1                   234


Q ss_pred             EEEecCCCch------HHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC--cc--cccc
Q psy1596         244 VAYCSDQAHS------SVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG--AC--AFDN  313 (375)
Q Consensus       244 vV~~S~~aH~------Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~--tG--avDp  313 (375)
                      .|++|+..|.      ++...+...|.+++.++++  +..|+++++++|.+++      .+|+.+..++.  .|  .+-|
T Consensus       162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T------~lv~~~h~sN~~~~G~~~~~d  233 (454)
T TIGR00474       162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENT------ALLLKVHTSNYRIVGFTEEVS  233 (454)
T ss_pred             EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCC------EEEEEEccCcccccCCCCCCC
Confidence            7888887763      3333445568888888764  3468999999997653      35666666654  46  5789


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCc-------ccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSS-------FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~-------~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|+++|+.++||++.|...       .-.|.......  ..||.+++++|||++.|. +|+++
T Consensus       234 l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~--~GaDiv~fSg~K~LgGp~-~G~i~  299 (454)
T TIGR00474       234 IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIA--AGVDLVTFSGDKLLGGPQ-AGIIV  299 (454)
T ss_pred             HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhH--cCCCEEEecCccccCCCe-EEEEE
Confidence            9999999999999999998744310       01111111111  147999999999999995 67653

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.28  E-value=7.7e-11  Score=120.70  Aligned_cols=146  Identities=12%  Similarity=0.056  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++.|.+                       ..+++++|+.|+..++.+...                   ++.
T Consensus        72 ~~Le~~lA~l~g~~-----------------------~av~~sSG~aAi~~al~all~-------------------~Gd  109 (436)
T PRK07812         72 DVVEQRIAALEGGV-----------------------AALLLASGQAAETFAILNLAG-------------------AGD  109 (436)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEEccHHHHHHHHHHHHhC-------------------CCC
Confidence            67788899988876                       269999999998888865422                   345


Q ss_pred             EEEecCCCchHHHHHHH--H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL--I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~--l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....+.  +  .+.+++.++ +.   -|+++++++|++.      +.+|++...++++|.+-|+++|++
T Consensus       110 ~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~---~d~e~l~~ai~~~------tklV~ie~~sNp~G~v~Dl~~I~~  179 (436)
T PRK07812        110 HIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP---DDLDAWRAAVRPN------TKAFFAETISNPQIDVLDIPGVAE  179 (436)
T ss_pred             EEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC---CCHHHHHHhCCCC------CeEEEEECCCCCCCeecCHHHHHH
Confidence            67888888877665442  2  355666654 22   3899999888643      347888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|+++|++++||++++.+....|    ...   .+|.++.++|||++.+
T Consensus       180 la~~~gi~liVD~t~a~~~~~~p----l~~---GaDivv~S~tK~lgg~  221 (436)
T PRK07812        180 VAHEAGVPLIVDNTIATPYLIRP----LEH---GADIVVHSATKYLGGH  221 (436)
T ss_pred             HHHHcCCEEEEECCCcccccCCc----hhc---CCCEEEEecccccCCC
Confidence            99999999999999987654322    112   4799999999998754

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.28  E-value=7.3e-11  Score=119.48  Aligned_cols=146  Identities=14%  Similarity=0.019  Sum_probs=111.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..+++++|+.|+..++.+...                   ++.
T Consensus        67 ~~le~~lA~l~g~~-----------------------~~i~~ssG~~Ai~~~l~all~-------------------~GD  104 (398)
T PRK08249         67 QAFEEKVRILEGAE-----------------------AATAFSTGMAAISNTLYTFLK-------------------PGD  104 (398)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCChHHHHHHHHHHhcC-------------------CCC
Confidence            78889999998865                       258888999888877765421                   345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+.....    ...|.+++.++.     .|+++++++|++.      +.+|+++.+++++|.+-|+++|++
T Consensus       105 ~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~-----~d~e~l~~~i~~~------tklV~ie~p~NPtg~v~dl~~I~~  173 (398)
T PRK08249        105 RVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET-----GDHEQIEAEIAKG------CDLLYLETPTNPTLKIVDIERLAA  173 (398)
T ss_pred             EEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCccCCHHHHHH
Confidence            7899999998765543    234666665543     5899999998653      347888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|++++||++|+.+....|    ..   ..+|.++.+++|+++.+-
T Consensus       174 la~~~gi~livD~t~a~~~~~~~----l~---~~~Divv~S~sK~l~g~~  216 (398)
T PRK08249        174 AAKKVGALVVVDNTFATPINQNP----LA---LGADLVIHSATKFLSGHA  216 (398)
T ss_pred             HHHHcCCEEEEECCcCccccCCc----hh---hCCCEEeccCceecCCCC
Confidence            99999999999999986543221    11   147999999999988654

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.28  E-value=1e-10  Score=117.24  Aligned_cols=167  Identities=17%  Similarity=0.078  Sum_probs=121.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+..|++.                   ++...++|+|+++++..++.+...               
T Consensus        66 ~G~~~lr~~ia~~~~~~~~~~~-------------------~~~~i~it~G~~~al~~~~~~~~~---------------  111 (384)
T PRK06348         66 GGDVELIEEIIKYYSKNYDLSF-------------------KRNEIMATVGACHGMYLALQSILD---------------  111 (384)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------ChhhEEEcCChHHHHHHHHHHhcC---------------
Confidence            3556677888999988888763                   345689999999998877765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|+++..++.....++...+.+++.+|.+  +++.+|+++|++++++.      +.+|+.+.++++||.+   
T Consensus       112 ----~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~  181 (384)
T PRK06348        112 ----PGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSK------TKAIILNSPNNPTGAVFSK  181 (384)
T ss_pred             ----CCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcC------ccEEEEeCCCCCCCcCCCH
Confidence                34578899999999999888778888888863  45679999999988643      2356666799999987   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +.+++|+++|++++++|++|.+|+....-.+  .... +.+...-..+.-++.|.++.|
T Consensus       182 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~vi~~~SfSK~~~l~  239 (384)
T PRK06348        182 ETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMAT-LAGMPERTITFGSFSKDFAMT  239 (384)
T ss_pred             HHHHHHHHHHHHCCeEEEEecccccceeCCCccchhh-cCCCcCcEEEEecchhccCCc
Confidence            5688999999999999999999987543111  0111 111111124556889988644

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.28  E-value=1.5e-10  Score=113.34  Aligned_cols=157  Identities=13%  Similarity=0.034  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .+..++.+.+++++|.+                       ..+++++|+++++.++.+...                   
T Consensus        61 ~~~~~l~~~la~~~~~~-----------------------~~i~~~~G~~~~~~~l~~~~~-------------------   98 (360)
T TIGR00858        61 PLHEELEEELAEWKGTE-----------------------AALLFSSGYLANVGVISALVG-------------------   98 (360)
T ss_pred             HHHHHHHHHHHHHhCCC-----------------------CEEEECchHHHHHHHHHHhCC-------------------
Confidence            33466778888887754                       247777778888766543321                   


Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      ++..|++++..|.+...++.+.+.+++.++.     +|++.|++.+++...  ..+.+|+.....+.+|.+.++++|.++
T Consensus        99 ~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~--~~~~~v~~~~~~~~~G~~~~~~~i~~l  171 (360)
T TIGR00858        99 KGDLILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNRG--ERRKLIVTDGVFSMDGDIAPLPQLVAL  171 (360)
T ss_pred             CCCEEEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHccc--CCCeEEEEeCCccCCCCCcCHHHHHHH
Confidence            3457889999999999998888888887763     689999999875321  123466666667889999999999999


Q ss_pred             HHhcCCEEEEecccccCcccch--hhhhhhcCC--CcccEEEEcCcccCCC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICP--EFRKWLAGV--EYANSIAFNPSKWLMV  367 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gi--e~aDSi~~d~HK~l~~  367 (375)
                      |+++|+++++|++|+.+..-..  .... ..++  ...|.+..++||+++.
T Consensus       172 ~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~~~~~i~i~s~sK~~~~  221 (360)
T TIGR00858       172 AERYGAWLMVDDAHGTGVLGEDGRGTLE-HFGLKPEPVDIQVGTLSKALGS  221 (360)
T ss_pred             HHHcCcEEEEECcccccCcCCCCCchHH-hcCCCccCCcEEEEechhhhhc
Confidence            9999999999999985432100  0011 1222  2458888999998865

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK07324 transaminase; Validated

Probab=99.28  E-value=5.4e-11  Score=119.01  Aligned_cols=142  Identities=13%  Similarity=-0.002  Sum_probs=103.6

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCc
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSL  277 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~m  277 (375)
                      ...++|+|+++++..++.+...                   ++..|+++..+|.++...++..|.+++.+|+++  ++.+
T Consensus        81 ~~vi~t~G~~~al~~~~~~l~~-------------------~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~  141 (373)
T PRK07324         81 ENILQTNGATGANFLVLYALVE-------------------PGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLP  141 (373)
T ss_pred             hhEEEcCChHHHHHHHHHHhCC-------------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCC
Confidence            3578999999999888765432                   345788899999998888888888999999864  3568


Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA  354 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a  354 (375)
                      |+++|++++.+.      +.+|+.+.++++||.+-+   +++|+++|+++|+++++|++|..... .+.........++ 
T Consensus       142 d~~~l~~~~~~~------~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~-~~~~~s~~~~~~~-  213 (373)
T PRK07324        142 DLDELRRLVRPN------TKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDE-DGSTPSIADLYEK-  213 (373)
T ss_pred             CHHHHHHhCCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccc-CCCCCChhhccCC-
Confidence            999999887543      347888899999998865   99999999999999999999976432 1111011111111 


Q ss_pred             cEEEEcCcccCCCC
Q psy1596         355 NSIAFNPSKWLMVH  368 (375)
Q Consensus       355 DSi~~d~HK~l~~P  368 (375)
                      .-..-++.|.++.|
T Consensus       214 ~I~~~s~SK~~~~~  227 (373)
T PRK07324        214 GISTNSMSKTYSLP  227 (373)
T ss_pred             EEEEecchhhcCCc
Confidence            13345888987644

>PRK05968 hypothetical protein; Provisional

Probab=99.28  E-value=1.1e-10  Score=117.77  Aligned_cols=150  Identities=12%  Similarity=0.113  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..+++++|+.|+..++.+...                   ++.
T Consensus        66 ~~le~~lA~l~g~~-----------------------~av~~~sG~~Ai~~al~al~~-------------------~Gd  103 (389)
T PRK05968         66 RAFEEMLAKLEGAE-----------------------DARGFASGMAAISSTVLSFVE-------------------PGD  103 (389)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            77888999998876                       247788899888877754321                   345


Q ss_pred             EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+...    .+...|.+++.++.+     |+++|++++. .      +.+|++..+++.++.+.|+++|++
T Consensus       104 ~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~-~------tklV~ie~pt~~~~~~~dl~~i~~  171 (389)
T PRK05968        104 RIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR-----DEEAVAKALP-G------AKLLYLESPTSWVFELQDVAALAA  171 (389)
T ss_pred             EEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC-----CHHHHHHhcc-c------CCEEEEECCCCCCCcHHHHHHHHH
Confidence            68888888876543    334457788887653     8899998873 2      236777888899999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|+++|+.++||++|+.+...-|    ...|   +|.++.++||++..|-+  .|++
T Consensus       172 la~~~gi~vivD~a~a~~~~~~p----~~~g---~Divv~S~tK~l~g~~~~~gG~i  221 (389)
T PRK05968        172 LAKRHGVVTMIDNSWASPVFQRP----ITLG---VDLVIHSASKYLGGHSDTVAGVV  221 (389)
T ss_pred             HHHHcCCEEEEECCCcchhccCc----hhcC---CcEEEeeccccccCCCCeEEEEE
Confidence            99999999999999987643222    1123   69999999999998754  5654

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.28  E-value=9.1e-11  Score=117.25  Aligned_cols=167  Identities=14%  Similarity=0.075  Sum_probs=118.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++.+.+|+++.+|.+.                   +.. ..++|+|+++++..++.+..+              
T Consensus        67 ~G~~~lr~~ia~~~~~~~~~~~-------------------~~~~~vi~t~G~~~~l~~~~~~~~~--------------  113 (383)
T TIGR03540        67 EGMLAYRQAVADWYKRRFGVEL-------------------DPETEVLSLIGSKEGIAHIPLAFVN--------------  113 (383)
T ss_pred             CCCHHHHHHHHHHHHHhhCCCC-------------------CCCCeEEECCCcHHHHHHHHHHhCC--------------
Confidence            3556777888999998888863                   222 467788889987776654321              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                           ++..|++++.++..+..+++..|.+++.||.++  ++.+|+++|++++.+.      +.+|+.+.++|+||.+-+
T Consensus       114 -----~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~~~~  182 (383)
T TIGR03540       114 -----PGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGAVAP  182 (383)
T ss_pred             -----CCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCccCC
Confidence                 345799999999888888888888999999863  3668999999988542      447777788999999855


Q ss_pred             ---HHHHHHHHHhcCCEEEEecccccCccc---chhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         314 ---LEELGPICEKEGLWLHVDAAYAGSSFI---CPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       314 ---l~eI~~ia~~~~iwlHVDaA~gg~~~~---~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                         +++|+++|++|++++++|.+|+-...-   .+.+.. +.+...-....-++.|.++.|
T Consensus       183 ~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~-~~~~~~~~i~~~SfSK~~g~~  242 (383)
T TIGR03540       183 LKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLE-VDGAKDVGIEFHSLSKTYNMT  242 (383)
T ss_pred             HHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCccc-CCCcccCEEEEEecccccCCc
Confidence               899999999999999999999753221   011111 111111234456777987543

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.28  E-value=8.9e-11  Score=118.84  Aligned_cols=146  Identities=11%  Similarity=0.033  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+.                       .+++++|+.++..++.+...                   ++.
T Consensus        68 ~~Le~~lA~l~G~~~-----------------------~~~~~sG~~Ai~~~l~~~l~-------------------~Gd  105 (398)
T PRK07504         68 DMFEKRMCALEGAED-----------------------ARATASGMAAVTAAILCQVK-------------------AGD  105 (398)
T ss_pred             HHHHHHHHHHhCCCe-----------------------eeEecCHHHHHHHHHHHHhC-------------------CCC
Confidence            678888999999872                       36788999998766654221                   345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...+.+.....    ...+.+++.++     .+|+++++++|++.      +.+|+++.+++++|.+-|+++|.+
T Consensus       106 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~~~------tklV~lesp~NptG~v~dl~~I~~  174 (398)
T PRK07504        106 HVVAARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVRPN------TKVFFLESPTNPTLEVIDIAAVAK  174 (398)
T ss_pred             EEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcCcC------ceEEEEECCCCCCcEecCHHHHHH
Confidence            7888888887765543    23466777764     27999999998653      448889999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|++++||++|+.+....|.    -.   .+|.++.++|||++.+-
T Consensus       175 la~~~gi~lvvD~a~a~~~~~~~~----~~---gaDivv~S~sK~l~g~g  217 (398)
T PRK07504        175 IANQAGAKLVVDNVFATPLFQKPL----EL---GAHIVVYSATKHIDGQG  217 (398)
T ss_pred             HHHHcCCEEEEECCccccccCCch----hh---CCCEEEeeccccccCCc
Confidence            999999999999999876443221    11   37999999999997653

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.27  E-value=4.4e-10  Score=113.27  Aligned_cols=190  Identities=13%  Similarity=0.030  Sum_probs=129.4

Q ss_pred             CchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe
Q psy1596         126 PFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ  205 (375)
Q Consensus       126 ~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft  205 (375)
                      +.+++...+.+.+.....     ..+.+..+.|......++.+.|++++|.+                       ..++.
T Consensus        61 ~~p~v~~a~~~~~~~~~~-----~~~~s~~~~g~~~~~~~l~~~la~~~g~~-----------------------~~~~~  112 (407)
T PRK09064         61 QHPKVIEAMIEALDRCGA-----GAGGTRNISGTNHYHVELERELADLHGKE-----------------------AALVF  112 (407)
T ss_pred             CCHHHHHHHHHHHHHcCC-----CCCCcCcCccCHHHHHHHHHHHHHHhCCC-----------------------cEEEE
Confidence            334555555555444322     11233444455555688889999998855                       24777


Q ss_pred             CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHH
Q psy1596         206 TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEA  285 (375)
Q Consensus       206 sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~a  285 (375)
                      ++|++||..++..++..                 .++.+|+.+...|.|+..++.+.+.+++.++.     .|+++|++.
T Consensus       113 ~sG~~an~~ai~~l~~~-----------------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~  170 (407)
T PRK09064        113 TSGYVSNDATLSTLAKL-----------------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEEL  170 (407)
T ss_pred             CcHHHHHHHHHHHHhCC-----------------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHH
Confidence            88999999888766431                 02346777888899998888877777766664     378999999


Q ss_pred             HHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC-CcccEEEEcCc
Q psy1596         286 IERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV-EYANSIAFNPS  362 (375)
Q Consensus       286 I~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi-e~aDSi~~d~H  362 (375)
                      ++....  ..+.+|+.+...+++|.+.|+++|.++|+++|++++||+||+.+.+ .+....  ...++ +..|.++.+++
T Consensus       171 l~~~~~--~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~-g~~g~g~~~~~~~~~~~div~~t~s  247 (407)
T PRK09064        171 LAAADP--DRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMY-GPRGGGIAERDGLMDRIDIIEGTLA  247 (407)
T ss_pred             HHhccC--CCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccccc-CCCCCChHHhcCCCCCCeEEEEecc
Confidence            874321  1255788888889999999999999999999999999999984421 111100  11222 35688888999


Q ss_pred             ccCCCC
Q psy1596         363 KWLMVH  368 (375)
Q Consensus       363 K~l~~P  368 (375)
                      |.++.+
T Consensus       248 Ka~g~~  253 (407)
T PRK09064        248 KAFGVM  253 (407)
T ss_pred             hhhhcc
Confidence            987643

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.27  E-value=1.4e-10  Score=117.39  Aligned_cols=147  Identities=11%  Similarity=0.081  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++.|.+                       ..++++||+.|+..++.+...                   ++.
T Consensus        67 ~~Le~~iA~~~g~~-----------------------~~l~~~sG~~Ai~~al~~ll~-------------------~Gd  104 (400)
T PRK06234         67 TEVENKLALLEGGE-----------------------AAVVAASGMGAISSSLWSALK-------------------AGD  104 (400)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHHHHHhC-------------------CCC
Confidence            67778888888754                       258999999998777654321                   345


Q ss_pred             EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....    +...|.+++.++.+     |+++|+++|++.      +.+|+.+.+++++|.+-|+++|++
T Consensus       105 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-----d~e~l~~~i~~~------tklI~iesP~NPtG~v~dl~~I~~  173 (400)
T PRK06234        105 HVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-----NLEEVRNALKAN------TKVVYLETPANPTLKVTDIKAISN  173 (400)
T ss_pred             EEEEecCccchHHHHHHHHHhhCCeEEEEECCC-----CHHHHHHHhccC------CeEEEEECCCCCCCCcCCHHHHHH
Confidence            788888887665443    34567788888753     899999998653      347888899999999999999999


Q ss_pred             HHHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++  |+++++|++|+.+....|.      +. .+|.++.+++|++..+-+
T Consensus       174 la~~~~~~i~livDea~~~~~~~~~l------~~-g~Divv~S~sK~l~g~g~  219 (400)
T PRK06234        174 IAHENNKECLVFVDNTFCTPYIQRPL------QL-GADVVVHSATKYLNGHGD  219 (400)
T ss_pred             HHHhcCCCCEEEEECCCCchhcCCch------hh-CCcEEEeeccccccCCCC
Confidence            99997  9999999999876442221      11 479999999999987653

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.27  E-value=7.4e-11  Score=121.56  Aligned_cols=188  Identities=14%  Similarity=0.015  Sum_probs=117.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHH-----HHHhhc--
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEA-----IRKYQQ--  229 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~-----~~~~~~--  229 (375)
                      ....++|..+++...++||.+.                      .-+=--+||.||+.+.++.....     +.+.+.  
T Consensus        91 ~~~d~ie~l~~~ra~~lf~a~~----------------------anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~  148 (493)
T PRK13580         91 QNVDTVEWEAAEHAKELFGAEH----------------------AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKT  148 (493)
T ss_pred             chHHHHHHHHHHHHHHHhCCCc----------------------ccccCCCcHHHHHHHHHHHhcccccCcchhcccccc
Confidence            3467888999999999999872                      11334578999998888766420     000000  


Q ss_pred             ----cCCcchhh-hhcCceEEEec---CCCchHHHHHHHHcC--CeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEE
Q psy1596         230 ----SHPELEHA-EINSRLVAYCS---DQAHSSVEKAGLIGL--VKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFF  298 (375)
Q Consensus       230 ----~~~~~~~~-~~~~~~vV~~S---~~aH~Sv~kaa~lg~--~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~  298 (375)
                          ...+|+.- ....+..|+.-   .-.|.+.-....+.+  .+.+..++| ++|.+|.++|++.+.+.+     | .
T Consensus       149 ~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~-----p-l  222 (493)
T PRK13580        149 VNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFK-----P-L  222 (493)
T ss_pred             ccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcC-----C-E
Confidence                00011100 00011233222   223333322222222  345556665 579999999999998653     4 4


Q ss_pred             EEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         299 VCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       299 Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++..++. +.+-|+++|+++|+++|.+++||+||+.+.+....+......+..+|.++.++||||+.|.| |++
T Consensus       223 vii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I  296 (493)
T PRK13580        223 ILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLV  296 (493)
T ss_pred             EEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEE
Confidence            555666555 55779999999999999999999999998764222211122345789999999999988997 443

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.27  E-value=1.7e-10  Score=116.39  Aligned_cols=144  Identities=17%  Similarity=0.179  Sum_probs=111.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++.+.+|+.+..|++.                   ... ..++|+|++++...++.+..+              
T Consensus        71 ~G~~~lR~~ia~~l~~~~~~~~-------------------~~~~~I~it~G~~~al~~~~~~l~~--------------  117 (403)
T PRK08636         71 KGIYKLRLAICNWYKRKYNVDL-------------------DPETEVVATMGSKEGYVHLVQAITN--------------  117 (403)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCeEEECCChHHHHHHHHHHhCC--------------
Confidence            5677788899999999888773                   233 488999999988777765432              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhc-CCccEEEEEEcCCCCcccc-
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKK-HLIPFFVCGTLGTTGACAF-  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~-g~~p~~Vv~t~GtT~tGav-  311 (375)
                           ++..|++.+.++..+...+...|.+++.||.+  +++.+|+++|.+.+++..++ +..+.+|+.+.++++||.+ 
T Consensus       118 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~  192 (403)
T PRK08636        118 -----PGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATV  192 (403)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccC
Confidence                 35689999999999888888888899999874  45789998775555443322 2235688888889999987 


Q ss_pred             --ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 --DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                        +.+++|+++|++|++||++|.+|+-..
T Consensus       193 s~~~~~~l~~~a~~~~~~II~De~Y~~l~  221 (403)
T PRK08636        193 EKSFYERLVALAKKERFYIISDIAYADIT  221 (403)
T ss_pred             CHHHHHHHHHHHHHcCcEEEEeccchhhc
Confidence              667889999999999999999998653

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.26  E-value=1.2e-10  Score=119.26  Aligned_cols=135  Identities=10%  Similarity=0.088  Sum_probs=105.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++|+|||+|++.++.++...+..+.          ++.++.
T Consensus        66 ~~fe~~lA~~~g~~-----------------------~~v~~~sGt~al~~aL~al~~~~~~~~----------~~~pGd  112 (438)
T PRK15407         66 DAFEKKLAEFLGVR-----------------------YALLVNSGSSANLLAFSALTSPKLGDR----------ALKPGD  112 (438)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHHhhcccccc----------CCCCCC
Confidence            66778888888875                       268999999999999887643221100          112456


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.+...++...|.+++.++++ +++.+|+++|+++|.+.      +.+|+++.   ..|...++++|.++|+
T Consensus       113 ~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~------tkaVi~~~---~~G~p~dl~~I~~la~  183 (438)
T PRK15407        113 EVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSPK------TKAIMIAH---TLGNPFDLAAVKAFCD  183 (438)
T ss_pred             EEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCcC------CeEEEEeC---CCCChhhHHHHHHHHH
Confidence            89999999999999988888899999886 57889999999998653      23555553   3567789999999999


Q ss_pred             hcCCEEEEecccccCccc
Q psy1596         323 KEGLWLHVDAAYAGSSFI  340 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~  340 (375)
                      ++|+++++|+||+.++..
T Consensus       184 ~~gi~vIeDaa~a~G~~~  201 (438)
T PRK15407        184 KHNLWLIEDNCDALGSTY  201 (438)
T ss_pred             HCCCEEEEECccchhhhc
Confidence            999999999999988754

>PLN02822 serine palmitoyltransferase

Probab=99.26  E-value=3.4e-10  Score=117.32  Aligned_cols=187  Identities=13%  Similarity=0.069  Sum_probs=127.8

Q ss_pred             chhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeC
Q psy1596         127 FQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQT  206 (375)
Q Consensus       127 ~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvfts  206 (375)
                      .+++...+.+.+++...     ....++.+-|+...+.++.+.|++++|.+                      ...++++
T Consensus       125 ~~~i~ea~~~al~~~G~-----g~~g~r~~yg~~~~~~~Lee~La~~~~~~----------------------~~i~~s~  177 (481)
T PLN02822        125 NEKIKESCTSALEKYGV-----GSCGPRGFYGTIDVHLDCETKIAKFLGTP----------------------DSILYSY  177 (481)
T ss_pred             CHHHHHHHHHHHHHhCC-----CCcccCccccCHHHHHHHHHHHHHHhCCC----------------------CEEEECC
Confidence            34455555555554322     11233445577777789999999999866                      2355665


Q ss_pred             ChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHH
Q psy1596         207 TASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAI  286 (375)
Q Consensus       207 GGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI  286 (375)
                      |++ ++..++.+...                   ++.+|++....|+++..++.+.+.+++.++.+     |.+.|++.+
T Consensus       178 G~~-a~~sai~a~~~-------------------~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l  232 (481)
T PLN02822        178 GLS-TIFSVIPAFCK-------------------KGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTL  232 (481)
T ss_pred             HHH-HHHHHHHHhCC-------------------CCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHH
Confidence            555 66555543211                   34578899999999999999988899999876     667788777


Q ss_pred             HHhhhc----CCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC--CcccEEE
Q psy1596         287 ERDKKK----HLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV--EYANSIA  358 (375)
Q Consensus       287 ~~~~~~----g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi--e~aDSi~  358 (375)
                      ++..+.    .....+|+.....+++|.+-|+++|+++|++||++|++|.+|+.+.+ -+..+.  ...++  +..|.++
T Consensus       233 ~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvl-G~~G~G~~e~~~v~~~~~dii~  311 (481)
T PLN02822        233 EKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVL-GKSGRGLSEHFGVPIEKIDIIT  311 (481)
T ss_pred             HHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCChHHHcCCCCCCCeEEE
Confidence            653322    11224777777778899999999999999999999999999985532 111110  11233  3679999


Q ss_pred             EcCcccCC
Q psy1596         359 FNPSKWLM  366 (375)
Q Consensus       359 ~d~HK~l~  366 (375)
                      .++.|.++
T Consensus       312 ~s~sKalg  319 (481)
T PLN02822        312 AAMGHALA  319 (481)
T ss_pred             ecchhhhh
Confidence            99999986

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.26  E-value=1.5e-10  Score=116.72  Aligned_cols=147  Identities=11%  Similarity=0.069  Sum_probs=111.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.++|+++.|.+                       ..++++||++++..++.+...                   ++.
T Consensus        55 ~~L~~~lA~l~g~~-----------------------~~i~~~sg~~Ai~~~l~~l~~-------------------~GD   92 (386)
T PRK08045         55 DVVQRALAELEGGA-----------------------GAVLTNTGMSAIHLVTTVFLK-------------------PGD   92 (386)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHHHHcC-------------------CCC
Confidence            78889999998743                       379999999988877764321                   345


Q ss_pred             EEEecCCCchHHHHHH-H---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG-L---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa-~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|.+....+ .   .++.++..++     ..|++++++++++.      +.+|+.+.+++++|.+-|+++|++
T Consensus        93 ~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-----~~d~e~l~~~l~~~------tklV~l~sP~NPtG~v~di~~I~~  161 (386)
T PRK08045         93 LLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-----QGDEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICH  161 (386)
T ss_pred             EEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-----CCCHHHHHHhcccC------CeEEEEECCCCCCCEecCHHHHHH
Confidence            7889999987655433 2   2444555553     26899999988653      347888899999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|++++||++|+.+....|    .-.   .+|.+..++|||++.+-+
T Consensus       162 ia~~~g~~vivDeay~~~~~~~p----l~~---gaDivv~S~tK~l~G~~d  205 (386)
T PRK08045        162 LAREAGAVSVVDNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSD  205 (386)
T ss_pred             HHHHcCCEEEEECCCCccccCCc----hhh---CCCEEEeecceeccCCCC
Confidence            99999999999999987754222    111   369999999999987765

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.26  E-value=9.1e-11  Score=122.44  Aligned_cols=137  Identities=9%  Similarity=-0.045  Sum_probs=105.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+..+...                   ++...++|+|+++++..++.+..+               
T Consensus       185 ~G~~~lReaia~~~~~~~~~~~-------------------~~~~I~it~G~~eal~~~~~~l~~---------------  230 (517)
T PRK13355        185 KGLFSARKAIMQYAQLKGLPNV-------------------DVDDIYTGNGVSELINLSMSALLD---------------  230 (517)
T ss_pred             cChHHHHHHHHHHHHhcCCCCC-------------------ChhHEEEeCcHHHHHHHHHHHhCC---------------
Confidence            3555666666666655432221                   334689999999998877765422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-  313 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-  313 (375)
                          ++..|++++.++..+...+.+.|.+++.+++++  ++.+|+++|++++.+.      +.+|+.+.++++||.+-+ 
T Consensus       231 ----~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~------~k~i~i~nP~NPTG~v~~~  300 (517)
T PRK13355        231 ----DGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSR------TKAIVIINPNNPTGALYPR  300 (517)
T ss_pred             ----CCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCcCH
Confidence                345789999999999988888888999998864  5789999999988643      347788889999999855 


Q ss_pred             --HHHHHHHHHhcCCEEEEecccccC
Q psy1596         314 --LEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       314 --l~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                        +++|+++|++|++||++|.+|.-.
T Consensus       301 ~~l~~i~~~a~~~~~~ii~DE~Y~~~  326 (517)
T PRK13355        301 EVLQQIVDIAREHQLIIFSDEIYDRL  326 (517)
T ss_pred             HHHHHHHHHHHHcCcEEEEehhhhhh
Confidence              899999999999999999999854

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.26  E-value=1.1e-10  Score=117.94  Aligned_cols=132  Identities=11%  Similarity=0.022  Sum_probs=101.3

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCC
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLS  276 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~  276 (375)
                      ..++++||++|+..++.+..+                   ++..|++++..|.+....+    ...|.+++.++.+    
T Consensus        78 ~~~~~~sG~~Ai~~~l~all~-------------------~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~----  134 (394)
T PRK09028         78 GTALYPSGAAAISNALLSFLK-------------------AGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM----  134 (394)
T ss_pred             cEEEECCHHHHHHHHHHHHhC-------------------CCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC----
Confidence            368999999999888765422                   3457888888886776543    1245666666543    


Q ss_pred             cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccE
Q psy1596         277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANS  356 (375)
Q Consensus       277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDS  356 (375)
                       +.+.|++++++.      +.+|+++.+++++|.+.||++|+++|+++|+|+.||++|+.+...-|.    -.   .||.
T Consensus       135 -~~e~l~~~l~~~------TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl----~~---GaDi  200 (394)
T PRK09028        135 -IGEGIRELIRPN------TKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPF----EM---GVDI  200 (394)
T ss_pred             -CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCcc----cc---CceE
Confidence             457788887543      448999999999999999999999999999999999999987543332    12   3799


Q ss_pred             EEEcCcccCCCCC
Q psy1596         357 IAFNPSKWLMVHF  369 (375)
Q Consensus       357 i~~d~HK~l~~P~  369 (375)
                      +..+.|||++.+-
T Consensus       201 vv~S~tK~l~Gh~  213 (394)
T PRK09028        201 SIQAATKYIVGHS  213 (394)
T ss_pred             EEEeCCeEecCCC
Confidence            9999999999883

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.25  E-value=1.7e-10  Score=116.74  Aligned_cols=150  Identities=9%  Similarity=0.020  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++-|-.                       ..+++++|+.|+..++.+...                   ++.
T Consensus        65 ~~le~~la~LEg~~-----------------------~a~~~~SGmaAi~~~~~~ll~-------------------~GD  102 (395)
T PRK08114         65 FSLQEAMCELEGGA-----------------------GCALYPCGAAAVANAILAFVE-------------------QGD  102 (395)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEEhHHHHHHHHHHHHHcC-------------------CCC
Confidence            66777888875433                       478889999998887765421                   345


Q ss_pred             EEEecCCCchHHHHHHH--H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL--I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~--l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+..+.+.  +  .|++++.++.     .|.+.++++|+++      +.+|.+...++++|.+-||++|++
T Consensus       103 ~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~-----~d~~~l~~~l~~~------TrlV~~EtpsNp~~~v~DI~~Ia~  171 (395)
T PRK08114        103 HVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP-----LIGADIAKLIQPN------TKVVFLESPGSITMEVHDVPAIVA  171 (395)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-----CCHHHHHHhcCCC------ceEEEEECCCCCCCEeecHHHHHH
Confidence            78899999988887652  2  4678888764     3788999998754      348999999999999999999999


Q ss_pred             HHHhcC--CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC--ccee
Q psy1596         320 ICEKEG--LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF--DCTA  373 (375)
Q Consensus       320 ia~~~~--iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~--~~g~  373 (375)
                      +|++++  +.++||++|+.+..+-|.    -.|   ||.+..+.|||++.+-  .+|+
T Consensus       172 ia~~~g~g~~lvVDnT~a~p~~~~pl----~~G---aDivv~S~tKyl~Ghsdv~~G~  222 (395)
T PRK08114        172 AVRSVNPDAVIMIDNTWAAGVLFKAL----DFG---IDISIQAGTKYLVGHSDAMIGT  222 (395)
T ss_pred             HHHHhCCCCEEEEECCCccccccCHH----HcC---CcEEEEcCcccccCCCcceeEE
Confidence            999984  999999999998654332    224   7999999999999995  4554

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.25  E-value=1.5e-10  Score=116.73  Aligned_cols=137  Identities=13%  Similarity=0.070  Sum_probs=105.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+++.+|.+.                   .+...++|+|+++|+..++.+...               
T Consensus        70 ~G~~~lr~~ia~~l~~~~g~~~-------------------~~~~i~~t~G~~~al~~~~~~~~~---------------  115 (402)
T PRK06107         70 NGTPALRKAIIAKLERRNGLHY-------------------ADNEITVGGGAKQAIFLALMATLE---------------  115 (402)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEeCCHHHHHHHHHHHhcC---------------
Confidence            4666777899999999888863                   334689999999998887754211               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.++.....++...+..++.++++  +++.+|+++|++++++.      +.+|+.+.++++||.+   
T Consensus       116 ----~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~  185 (402)
T PRK06107        116 ----AGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVYSR  185 (402)
T ss_pred             ----CCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCcCH
Confidence                34578898888777777776666677788874  34679999999988532      4467778899999976   


Q ss_pred             ccHHHHHHHHHhc-CCEEEEecccccC
Q psy1596         312 DNLEELGPICEKE-GLWLHVDAAYAGS  337 (375)
Q Consensus       312 Dpl~eI~~ia~~~-~iwlHVDaA~gg~  337 (375)
                      +.+++|+++|+++ ++++++|.+|+-.
T Consensus       186 ~~~~~l~~~a~~~~~~~iI~De~y~~l  212 (402)
T PRK06107        186 AELRALADVLLRHPHVLVLTDDIYDHI  212 (402)
T ss_pred             HHHHHHHHHHHHcCCeEEEEehhcccc
Confidence            5678889999998 9999999999753

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.25  E-value=1.9e-10  Score=118.85  Aligned_cols=145  Identities=14%  Similarity=0.102  Sum_probs=113.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++++.+|+.+.+|.+..         .        ++...++|+|+++++...+.+..+               
T Consensus        86 ~G~~~LR~aiA~~l~~~~~~~~~---------v--------~~~~Iiit~Ga~~al~~l~~~l~~---------------  133 (468)
T PLN02450         86 HGLPAFKNALAEFMSEIRGNKVT---------F--------DPNKLVLTAGATSANETLMFCLAE---------------  133 (468)
T ss_pred             CChHHHHHHHHHHHHHhhCCCCC---------c--------ChHHeEEccChHHHHHHHHHHhCC---------------
Confidence            46667778889999888775410         0        234578899999987766654432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                          ++..|++++..+..+...+. ..|.+++.||++  +++.+|+++|++++++..+++..+.+|+.+.++|+||.+  
T Consensus       134 ----pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s  209 (468)
T PLN02450        134 ----PGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTT  209 (468)
T ss_pred             ----CCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccC
Confidence                35579999999988888776 578899999984  567889999999998755555556678888899999988  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                       +.+++|.++|+++++|+++|.+|+..
T Consensus       210 ~e~l~~ll~~a~~~~~~iI~DE~Y~~~  236 (468)
T PLN02450        210 RTELNLLVDFITAKNIHLISDEIYSGT  236 (468)
T ss_pred             HHHHHHHHHHHHHCCcEEEEEcccccc
Confidence             56788899999999999999999864

>PRK08068 transaminase; Reviewed

Probab=99.24  E-value=1.7e-10  Score=115.65  Aligned_cols=168  Identities=11%  Similarity=0.030  Sum_probs=118.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++++.+|+.+.+|.+.                   ++. ..++|+||+++...++.+...              
T Consensus        70 ~g~~~lr~aia~~~~~~~g~~~-------------------~~~~~i~it~G~~~~l~~~~~~~~~--------------  116 (389)
T PRK08068         70 RGYPFLKEAAADFYKREYGVTL-------------------DPETEVAILFGGKAGLVELPQCLMN--------------  116 (389)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCccEEEcCCcHHHHHHHHHHhCC--------------
Confidence            4566777888888887778763                   333 578899999987776543221              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                           ++..|++.+.++..+..++...|.+++.||+++  ++.+|+++|++++.+.      +.+|+.+.++++||.+  
T Consensus       117 -----~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPTG~~~s  185 (389)
T PRK08068        117 -----PGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEK------AKLMYLNYPNNPTGAVAT  185 (389)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCCcCC
Confidence                 345789999999999888888889999999964  4678999999988542      3467777789999998  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc--CCCcccEEEEcCcccCCCC
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA--GVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~--gie~aDSi~~d~HK~l~~P  368 (375)
                       +.+++|+++|+++++++++|.||+-...-.......+.  +...-.-+.-++.|.++.|
T Consensus       186 ~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~  245 (389)
T PRK08068        186 KAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMA  245 (389)
T ss_pred             HHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCc
Confidence             45678888999999999999999753211000000111  1111124566889987543

>PLN02271 serine hydroxymethyltransferase

Probab=99.24  E-value=1.1e-10  Score=121.24  Aligned_cols=169  Identities=11%  Similarity=-0.054  Sum_probs=116.6

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      .+++|..+++...++||.+.        .          ..+.-|---+||.||+.++++..+                 
T Consensus       192 iD~iE~la~era~~lF~~~~--------~----------~~gaNVQp~SGs~AN~aV~~ALl~-----------------  236 (586)
T PLN02271        192 IDQIERLCCERALAAFGLDS--------E----------KWGVNVQPYSCTSANFAVYTGLLL-----------------  236 (586)
T ss_pred             HHHHHHHHHHHHHHHhCCcc--------c----------ccccceeeccHHHHHHHHHHHhcC-----------------
Confidence            45888999999999999872        0          011124445999999998876532                 


Q ss_pred             hcCceEEEecCC---CchHHHH------HHHHcCCeEEEEe--cC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCC
Q psy1596         239 INSRLVAYCSDQ---AHSSVEK------AGLIGLVKMRYIE--SD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT  306 (375)
Q Consensus       239 ~~~~~vV~~S~~---aH~Sv~k------aa~lg~~~v~~Vp--~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT  306 (375)
                        +++.|+..+.   .|.+...      .+...+..+..+|  +| ++|.+|.++|++...+.     .|.+|++..-+.
T Consensus       237 --PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~-----rPKLII~g~Say  309 (586)
T PLN02271        237 --PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDF-----RPKILICGGSSY  309 (586)
T ss_pred             --CCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhc-----CCeEEEECchhc
Confidence              3456766544   4555421      1223344455555  64 67999999999955432     266676643222


Q ss_pred             CccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         307 GACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       307 ~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .  ..-|+++|++||+++|++++||+||..+.+....+.   ..+.+||.++.+.||||..|.|..++
T Consensus       310 p--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~---sP~~~aDvvt~TTHKtLrGPrGG~I~  372 (586)
T PLN02271        310 P--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECV---NPFDYCDIVTSTTHKSLRGPRGGIIF  372 (586)
T ss_pred             c--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCC---CCCcCCcEEEeCCcccCCCCCceEEE
Confidence            2  667899999999999999999999999876443221   23456899999999999999994444

>PRK07683 aminotransferase A; Validated

Probab=99.24  E-value=4.8e-10  Score=112.53  Aligned_cols=167  Identities=13%  Similarity=0.108  Sum_probs=121.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++++.+|+.+..|++.                   ++. ..++|+|+++|+..++.+...              
T Consensus        65 ~g~~~lr~~ia~~l~~~~g~~~-------------------~~~~~I~~t~G~~~al~~~~~~l~~--------------  111 (387)
T PRK07683         65 AGLLELRKAACNFVKDKYDLHY-------------------SPESEIIVTIGASEAIDIAFRTILE--------------  111 (387)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEeCChHHHHHHHHHHhCC--------------
Confidence            4567778888888888778763                   233 689999999998877654321              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                           ++..|+++..++.....++...|.+++.++.++ ++.+|+++|++.+.+.      +.+|+.+.++++||.+   
T Consensus       112 -----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~i~i~~p~NPtG~~~s~  180 (387)
T PRK07683        112 -----PGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEK------TRCVVLPYPSNPTGVTLSK  180 (387)
T ss_pred             -----CCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCCH
Confidence                 235788899888888888887888999999864 5678899999987643      3467778899999997   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +++++|+++|+++|+++++|++|+....-.+  ..... .+...-.-+.-++.|.++.|
T Consensus       181 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~vi~~~s~SK~~~~p  238 (387)
T PRK07683        181 EELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHF-PEMREKTIVINGLSKSHSMT  238 (387)
T ss_pred             HHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhc-cCCcCCeEEEeeccccccCc
Confidence            5699999999999999999999987532111  01111 01111135567899998866

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.24  E-value=2.2e-10  Score=114.60  Aligned_cols=167  Identities=14%  Similarity=0.083  Sum_probs=117.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++.+.+|+.+.+|.+.                   ++. ..++|+|++++...++.+..+              
T Consensus        69 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~ii~t~G~~~~i~~~~~~~~~--------------  115 (385)
T PRK09276         69 EGMLEFRKAVADWYKRRFGVEL-------------------DPETEVISLIGSKEGIAHIPLAFVN--------------  115 (385)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEccCcHHHHHHHHHHhCC--------------
Confidence            3456677888899988888753                   222 367788999988776654322              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc-
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD-  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD-  312 (375)
                           ++..|++++.++..+...++..|.+++.+|.++  .+.+|++++++.+.+.      +.+|+.+.++|+||.+- 
T Consensus       116 -----~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~  184 (385)
T PRK09276        116 -----PGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKK------AKLMFINYPNNPTGAVAD  184 (385)
T ss_pred             -----CCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCCCCCCC
Confidence                 345788999999888888888888999999853  4668999998887532      34777778999999984 


Q ss_pred             --cHHHHHHHHHhcCCEEEEecccccCccc---chhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         313 --NLEELGPICEKEGLWLHVDAAYAGSSFI---CPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       313 --pl~eI~~ia~~~~iwlHVDaA~gg~~~~---~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                        .+++|+++|+++++|+++|.+|+....-   .+.... +.+...-..+.-++.|.++.|
T Consensus       185 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~~  244 (385)
T PRK09276        185 LEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLE-VPGAKDVGIEFHSLSKTYNMT  244 (385)
T ss_pred             HHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhc-cCCCcCCEEEEecchhhcCCc
Confidence              4789999999999999999999864321   111111 111111134456788987544

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.23  E-value=9.5e-10  Score=111.11  Aligned_cols=188  Identities=13%  Similarity=0.051  Sum_probs=128.0

Q ss_pred             hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596         128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT  207 (375)
Q Consensus       128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG  207 (375)
                      +++...+.+.+.+-..     ..+.+....++...+.++.+.|++++|.+                       ..++.++
T Consensus        62 p~v~~a~~~~~~~~~~-----~~~~s~~~~~~~~~~~~le~~la~~~g~~-----------------------~~~~~~S  113 (406)
T PRK13393         62 PAVLAAMHEALDTCGA-----GAGGTRNISGTNHYHVLLEAELADLHGKE-----------------------AALLFTS  113 (406)
T ss_pred             HHHHHHHHHHHHHcCC-----CCcccccccCChHHHHHHHHHHHHHhCCC-----------------------cEEEeCC
Confidence            4455555555544321     11224444455556688899999999865                       2577778


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596         208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE  287 (375)
Q Consensus       208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~  287 (375)
                      |++||..++.+....                 .++.+|+++...|.|+..++++.+.+++.++.     .|+++|++.++
T Consensus       114 G~~An~~ai~~l~~~-----------------~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~  171 (406)
T PRK13393        114 GYVSNWAALSTLGSR-----------------LPGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLS  171 (406)
T ss_pred             cHHHHHHHHHHhhcC-----------------CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHH
Confidence            889999988743211                 02347888889999999998887777777775     37888998886


Q ss_pred             HhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCC-CcccEEEEcCccc
Q psy1596         288 RDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGV-EYANSIAFNPSKW  364 (375)
Q Consensus       288 ~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi-e~aDSi~~d~HK~  364 (375)
                      ....  ..+.+|+....++++|.+.|+++|.++|+++|+++++|+||+.+.+ .+.-..  ...++ +..|.+.-++-|.
T Consensus       172 ~~~~--~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~~G~g~~~~~~~~~~~~i~~~tlsKa  248 (406)
T PRK13393        172 DLDP--HRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLY-GPRGGGIAEREGLADRLTIIEGTLAKA  248 (406)
T ss_pred             hccC--CCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCchhhhcCCCCCCeEEEEeCchh
Confidence            4321  1245777778889999999999999999999999999999985432 111110  01122 3357776788998


Q ss_pred             CCCC
Q psy1596         365 LMVH  368 (375)
Q Consensus       365 l~~P  368 (375)
                      ++.+
T Consensus       249 ~g~~  252 (406)
T PRK13393        249 FGVM  252 (406)
T ss_pred             hccc
Confidence            7754

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.23  E-value=7.1e-11  Score=119.68  Aligned_cols=185  Identities=15%  Similarity=0.116  Sum_probs=119.4

Q ss_pred             cccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHH
Q psy1596         145 VTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAI  224 (375)
Q Consensus       145 ~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~  224 (375)
                      ..+.|.+|+.+        .++.+.++++||++                       ..++|..|+.++.++..+......
T Consensus        66 GDD~Y~gdpSv--------~~Lee~vael~G~E-----------------------~alpthqGRgaE~Il~~~~~~~~g  114 (467)
T TIGR02617        66 GDEAYSGSRSY--------YALAESVKNIFGYQ-----------------------YTIPTHQGRGAEQIYIPVLIKKRE  114 (467)
T ss_pred             CCcccccCchH--------HHHHHHHHHHhCCc-----------------------eEEECCCCchHHHHHHHhhccccc
Confidence            44667777777        78899999999998                       268899999999888766543100


Q ss_pred             HHhhccCCcchhhhhcCceEEEecCCCchHHHHH-HHHcCCeEEEEec----------CCCCCcCHHHHHHHHHHhhhcC
Q psy1596         225 RKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKA-GLIGLVKMRYIES----------DDKLSLRGDKLIEAIERDKKKH  293 (375)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~----------d~~g~md~e~Le~aI~~~~~~g  293 (375)
                      .+..     +      .....+++...|+---++ +.++|..++.+++          ..+|.||+++|+++|++.-. .
T Consensus       115 ~e~g-----~------~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~  182 (467)
T TIGR02617       115 QEKG-----L------DRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-N  182 (467)
T ss_pred             cccc-----c------cccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-C
Confidence            0000     0      000013344445444344 4688888777643          23689999999999986422 1


Q ss_pred             CccEEEEEEcCCCC-ccc---cccHHHHHHHHHhcCCEEEEecccccC-cccch---------hhhhhhc-CCCcccEEE
Q psy1596         294 LIPFFVCGTLGTTG-ACA---FDNLEELGPICEKEGLWLHVDAAYAGS-SFICP---------EFRKWLA-GVEYANSIA  358 (375)
Q Consensus       294 ~~p~~Vv~t~GtT~-tGa---vDpl~eI~~ia~~~~iwlHVDaA~gg~-~~~~~---------~~~~~~~-gie~aDSi~  358 (375)
                      .++ ++..+..+|. -|.   .++|.++.++|++||+.+|+|||.-+. +.+..         ..+...+ -...+|+++
T Consensus       183 ~i~-~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt  261 (467)
T TIGR02617       183 NVP-YIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLA  261 (467)
T ss_pred             Cce-eeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEE
Confidence            233 3334433333 343   488999999999999999999998663 43211         1111111 125689999


Q ss_pred             EcCcccCCCCCccee
Q psy1596         359 FNPSKWLMVHFDCTA  373 (375)
Q Consensus       359 ~d~HK~l~~P~~~g~  373 (375)
                      +|+-|.+++|.|+-+
T Consensus       262 ~slsKglgApvGg~L  276 (467)
T TIGR02617       262 MSAKKDAMVPMGGLL  276 (467)
T ss_pred             EEcCCCCCCcccceE
Confidence            999999999998644

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>KOG0257|consensus

Probab=99.23  E-value=2e-10  Score=114.18  Aligned_cols=167  Identities=13%  Similarity=0.099  Sum_probs=127.6

Q ss_pred             CCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCc
Q psy1596         122 KPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNF  201 (375)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~  201 (375)
                      -++.+.|++.-+....+...- ...+-++     .-|+.++.+.+.+.+++++|....                  ....
T Consensus        40 fp~~~~P~fv~ea~~~~~~~~-~~~qYt~-----~~G~p~L~~aL~k~~se~~~~~~~------------------~~~e   95 (420)
T KOG0257|consen   40 FPDFPPPKFVTEAAKNAAKEP-STNQYTR-----GYGLPQLRKALAKAYSEFYGGLLD------------------PDDE   95 (420)
T ss_pred             CCCCCCcHHHHHHHHHHhccc-hhccccc-----cCCchHHHHHHHHHHHHHhccccC------------------Cccc
Confidence            456677776665554433321 1111111     135666678888888887776521                  3346


Q ss_pred             EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--------C
Q psy1596         202 ITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--------D  273 (375)
Q Consensus       202 GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--------~  273 (375)
                      .++|.|+.++.+.++++..+                   +++.|++-+....+.....++.|...+.||..        +
T Consensus        96 VlVT~GA~~ai~~~~~~l~~-------------------~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~  156 (420)
T KOG0257|consen   96 VLVTAGANEAISSALLGLLN-------------------PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSS  156 (420)
T ss_pred             EEEecCchHHHHHHHHHHcC-------------------CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCc
Confidence            89999999999998887654                   45688899999999999999988887877764        6


Q ss_pred             CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596         274 KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       274 ~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      ++.+|.+.||.+|.+.++      +|+.+.++|++|.+   ..|++|++||++||+|++.|.+|...
T Consensus       157 ~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~  217 (420)
T KOG0257|consen  157 DWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWL  217 (420)
T ss_pred             cccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHH
Confidence            789999999999988654      89999999999998   56899999999999999999999774

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.22  E-value=2.4e-10  Score=117.45  Aligned_cols=146  Identities=14%  Similarity=0.106  Sum_probs=115.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++++.+++.+.+|...         .+        ++...++|+|+|+++.+.+.+..+               
T Consensus        95 ~G~~~LR~aiA~~l~~~~~~~~---------~v--------~p~~Ivit~G~t~al~~l~~~l~~---------------  142 (447)
T PLN02607         95 HGLKSFRQAMASFMEQIRGGKA---------RF--------DPDRIVLTAGATAANELLTFILAD---------------  142 (447)
T ss_pred             cchHHHHHHHHHHHHHhcCCCC---------Cc--------CHHHeEEcCChHHHHHHHHHHhCC---------------
Confidence            5777788888999988877421         00        334688999999997766554322               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                          ++..|+++...+..+...+. ..+.+++.|+.+  +++.+|+++|++++++..+.|..+.+|+.+.++|++|.+  
T Consensus       143 ----pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s  218 (447)
T PLN02607        143 ----PGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQ  218 (447)
T ss_pred             ----CCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccC
Confidence                34578899999988888775 467888999886  346799999999998876667667778889999999987  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                       +.+++|.++|+++++++++|.+|+...
T Consensus       219 ~e~l~~l~~~~~~~~i~lI~DEiYa~~~  246 (447)
T PLN02607        219 RSVLEDILDFVVRKNIHLVSDEIYSGSV  246 (447)
T ss_pred             HHHHHHHHHHHHHCCCEEEEeccccccc
Confidence             458899999999999999999998754

>PRK09265 aminotransferase AlaT; Validated

Probab=99.22  E-value=2.2e-10  Score=115.52  Aligned_cols=114  Identities=15%  Similarity=-0.007  Sum_probs=91.5

Q ss_pred             CCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCC
Q psy1596         199 PNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLS  276 (375)
Q Consensus       199 ~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~  276 (375)
                      +...++|+|+++++..++.+...                   ++..|++++.+|..+..++...+.+++.++++.  ++.
T Consensus        95 ~~~i~~t~G~~~~l~~~~~~~~~-------------------~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~  155 (404)
T PRK09265         95 VDDIYIGNGVSELIVMAMQALLN-------------------NGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWF  155 (404)
T ss_pred             cccEEEeCChHHHHHHHHHHhCC-------------------CCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCC
Confidence            34688999999988777654321                   345788999999998888877777888888753  577


Q ss_pred             cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccC
Q psy1596         277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      +|+++|++++.+.      +.+|+.+.++++||.+-+   +++|+++|+++|+++++|.+|+..
T Consensus       156 ~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~  213 (404)
T PRK09265        156 PDLDDIRSKITPR------TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKI  213 (404)
T ss_pred             CCHHHHHHhcccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhc
Confidence            9999999988543      346777889999999866   999999999999999999999864

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.22  E-value=2.7e-10  Score=115.37  Aligned_cols=138  Identities=9%  Similarity=0.070  Sum_probs=109.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++++.+|+.+..|++.                   ++...++|+|+++++..++.+..+               
T Consensus        74 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~I~it~G~~~al~~~~~~l~~---------------  119 (409)
T PLN00143         74 GGILPARRAIADYLSNDLPYQL-------------------SPDDVYLTLGCKHAAEIIIKVLAR---------------  119 (409)
T ss_pred             CCCHHHHHHHHHHHHhhcCCCC-------------------CHhhEEEecChHHHHHHHHHHHcC---------------
Confidence            3566677888888888777763                   345688999999998887765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD--  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD--  312 (375)
                          ++..|+++..++..+...+...+.+++.++.+  +++.+|+++|++++++.      +..++.+.++|+||.+-  
T Consensus       120 ----~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~nP~NPTG~~~s~  189 (409)
T PLN00143        120 ----PEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADEN------TIAMVIINPGNPCGSVYSY  189 (409)
T ss_pred             ----CCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccC------CEEEEEECCCCCCCCccCH
Confidence                34578899999988888888888899999874  45689999999887543      33667777999999984  


Q ss_pred             -cHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         313 -NLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       313 -pl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                       .+++|+++|+++++++++|.+|....
T Consensus       190 ~~~~~l~~~a~~~~~~ii~De~Y~~l~  216 (409)
T PLN00143        190 EHLNKIAETARKLGILVIADEVYGHIV  216 (409)
T ss_pred             HHHHHHHHHHHHcCCeEEEEccccccc
Confidence             58888899999999999999998753

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.22  E-value=3.3e-10  Score=113.74  Aligned_cols=173  Identities=15%  Similarity=0.061  Sum_probs=117.9

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ....+.++.+.|++++|.+.                     ...+|++|||+||..++.++|...               
T Consensus        77 ~~~~~~~l~~~l~~~~~~~~---------------------~~v~~~~sgsea~~~al~~~~~~~---------------  120 (413)
T cd00610          77 YNEPAVELAELLLALTPEGL---------------------DKVFFVNSGTEAVEAALKLARAYT---------------  120 (413)
T ss_pred             CCHHHHHHHHHHHHhCCCCC---------------------CEEEEcCcHHHHHHHHHHHHHHHc---------------
Confidence            45566899999999988531                     257999999999999999987531               


Q ss_pred             hcCceEEEecCCCchHHHHHHHHcCC------------eEEEEecCC------CCCcCHHHHHHHHHHhhhcCCccEEEE
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDD------KLSLRGDKLIEAIERDKKKHLIPFFVC  300 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~------~g~md~e~Le~aI~~~~~~g~~p~~Vv  300 (375)
                       .++.+++.+..-|.+...++.+.+.            +++.+|.++      +...|+++|++++++.   +..+.+|+
T Consensus       121 -~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi  196 (413)
T cd00610         121 -GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVI  196 (413)
T ss_pred             -CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEE
Confidence             0123555666677777666554322            356777653      3445899999998753   12345666


Q ss_pred             EEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         301 GTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       301 ~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++-..+.+|.+-+    +++|.++|++||+++++|++|++.......+.....++ ..|.++++  |+++..+.+|.+
T Consensus       197 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~  271 (413)
T cd00610         197 VEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAV  271 (413)
T ss_pred             EccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEE
Confidence            6666667788766    99999999999999999999986422111111111233 35766665  999877777765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.21  E-value=3.1e-10  Score=114.32  Aligned_cols=147  Identities=11%  Similarity=0.093  Sum_probs=111.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++.|-+                       .+++|+||++|+..++.+...                   ++.
T Consensus        54 ~~le~~lA~l~g~~-----------------------~v~~~~gg~~Ai~~~l~all~-------------------~GD   91 (382)
T TIGR02080        54 DLLQQALAELEGGA-----------------------GAVVTNTGMSAIHLVTTALLG-------------------PDD   91 (382)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHHHHHcC-------------------CCC
Confidence            77888999988733                       378999999998887765422                   345


Q ss_pred             EEEecCCCchHHHHHH-HH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG-LI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa-~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....+ .+   ++.++..++.     .|+++|+++|++.      +.+|+.+.+++++|.+-|+++|++
T Consensus        92 ~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~-----~d~~~l~~ai~~~------tklV~l~~p~NPtG~~~dl~~I~~  160 (382)
T TIGR02080        92 LLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ-----GDEQALRAALAQK------PKLVLIETPSNPLLRVVDIAKICH  160 (382)
T ss_pred             EEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcC------ceEEEEECCCCCCCEecCHHHHHH
Confidence            7889999987665543 22   3445554432     3889999998653      447888899999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|+++.||.+|+.+....|    +..   .+|.++.+++||+..+-+
T Consensus       161 la~~~g~~vvvD~a~~~~~~~~p----l~~---gaDivv~S~sK~l~G~~~  204 (382)
T TIGR02080       161 LAKAVGAVVVVDNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSD  204 (382)
T ss_pred             HHHHcCCEEEEECCCcccccCCc----hhh---CCCEEEeecceeccCCCC
Confidence            99999999999999986643222    111   369999999999987765

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.21  E-value=2.3e-10  Score=115.02  Aligned_cols=141  Identities=11%  Similarity=0.123  Sum_probs=108.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .|..++++.+.+|+.+..|++ .                   ++ ...++|+|+++++..++.+..+.     +      
T Consensus        65 ~G~~~lr~~ia~~~~~~~g~~~~-------------------~~~~~i~it~G~~~al~~~~~~l~~~-----~------  114 (396)
T PRK09147         65 AGLPALREAIAAWLERRYGLPAL-------------------DPATQVLPVNGSREALFAFAQTVIDR-----D------  114 (396)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCcC-------------------CccceEEECCChHHHHHHHHHHHcCC-----C------
Confidence            355667788889998888875 3                   23 25778899999887766654320     0      


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-  311 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-  311 (375)
                           ..+..|+++..++..+..++...|.+++.||+++  ++.+|+++|++.+.+.      +.+++.+.++++||.+ 
T Consensus       115 -----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~~~  183 (396)
T PRK09147        115 -----GPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWAR------TQLLFVCSPGNPTGAVL  183 (396)
T ss_pred             -----CCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhc------cEEEEEcCCCCCcCccC
Confidence                 0145788999998888888888888999999863  3689999999887542      3466677899999988 


Q ss_pred             --ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 --DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                        +.+++|+++|++|++||++|.+|+-..
T Consensus       184 s~~~~~~l~~~a~~~~~~ii~De~y~~~~  212 (396)
T PRK09147        184 PLDDWKKLFALSDRYGFVIASDECYSEIY  212 (396)
T ss_pred             CHHHHHHHHHHHHHcCeEEEeeccccccc
Confidence              578899999999999999999998753

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.21  E-value=3.7e-10  Score=114.64  Aligned_cols=167  Identities=11%  Similarity=0.020  Sum_probs=121.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .|...+++.+.+|+.+..|++ .                   ++. ..++|+|+++++..++.+..+             
T Consensus        81 ~G~~~lr~aia~~~~~~~g~~~~-------------------~~~~~I~it~Gs~~al~~~~~~~~~-------------  128 (410)
T PRK06290         81 NGIQEFKEAAARYMEKVFGVKDI-------------------DPVTEVIHSIGSKPALAMLPSCFIN-------------  128 (410)
T ss_pred             CCcHHHHHHHHHHHHHHcCCCcC-------------------CCcceEEEccCHHHHHHHHHHHhCC-------------
Confidence            467788889999998888875 3                   233 588999999987666654322             


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                            ++..|++...++..+...++..|.+++.||.++  ++.+|+++|++++.+.      +.+|+.+.++++||.+-
T Consensus       129 ------~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~v~  196 (410)
T PRK06290        129 ------PGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGAVA  196 (410)
T ss_pred             ------CCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCcCC
Confidence                  345788899998888888888888999999874  4678999999888542      34777778999999984


Q ss_pred             c---HHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         313 N---LEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       313 p---l~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +   +++|+++|++|++||++|.+|+....-.  +.+.. +.+....+-+.-++.|.++.|
T Consensus       197 s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~-~~~~~~~~I~i~SfSK~~g~~  256 (410)
T PRK06290        197 TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLS-VPGAKEVGVEIHSLSKAYNMT  256 (410)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhc-CCCccccEEEEeechhhcCCc
Confidence            4   7888889999999999999998653211  01111 111123457778889987543

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.21  E-value=3.5e-10  Score=113.90  Aligned_cols=146  Identities=12%  Similarity=0.038  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.++++.|.+                       ..+++++|+.|+..++ .+..                   ++.
T Consensus        53 ~~Le~~la~l~g~~-----------------------~al~~~SG~~Al~~~l-~~l~-------------------pGd   89 (380)
T PRK06176         53 FALEELIADLEGGV-----------------------KGFAFASGLAGIHAVF-SLFQ-------------------SGD   89 (380)
T ss_pred             HHHHHHHHHHhCCC-----------------------CEEEECCHHHHHHHHH-HHcC-------------------CCC
Confidence            67888899998865                       2588888988775433 2211                   345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|.+....+    ...+.+++.++.     .|+++|+++++++      +.+|++..+++++|.+-|+++|++
T Consensus        90 ~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~-----~d~e~l~~ai~~~------t~lV~lesP~Nptg~~~di~~I~~  158 (380)
T PRK06176         90 HVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT-----SDLSQIKKAIKPN------TKALYLETPSNPLLKITDLAQCAS  158 (380)
T ss_pred             EEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC-----CCHHHHHHhcCcC------ceEEEEECCCCCCceecCHHHHHH
Confidence            7888888876655443    234667776664     3899999988653      447888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|++++||++|+......|    .  + -.+|.+++++||++..|-+
T Consensus       159 la~~~gi~vivD~t~a~~~~~~p----~--~-~gaDivv~S~tK~l~g~~d  202 (380)
T PRK06176        159 VAKDHGLLTIVDNTFATPYYQNP----L--L-LGADIVVHSGTKYLGGHSD  202 (380)
T ss_pred             HHHHcCCEEEEECCccccccCCc----c--c-cCCCEEEecCceeccCCcc
Confidence            99999999999999987533222    1  1 1479999999999988764

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.21  E-value=3.9e-10  Score=112.16  Aligned_cols=166  Identities=15%  Similarity=0.016  Sum_probs=121.7

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |...+++.+.+|+.+..|.+.                   ++...++|+|+++++..++.+..+                
T Consensus        66 g~~~lr~aia~~~~~~~~~~~-------------------~~~~I~it~G~~~~l~~~~~~~~~----------------  110 (368)
T PRK03317         66 DAVALRADLAAYLTAQTGVGL-------------------TVENVWAANGSNEILQQLLQAFGG----------------  110 (368)
T ss_pred             chHHHHHHHHHHhhhhccCCC-------------------ChhhEEECCCHHHHHHHHHHHhcC----------------
Confidence            456677888889888888763                   334688899999988777765432                


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                         ++..|++...++..+..++...+.+++.++.++++.+|+++|++++++..     +.+|+.+.++++||.+-+.+++
T Consensus       111 ---~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l  182 (368)
T PRK03317        111 ---PGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDV  182 (368)
T ss_pred             ---CCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHH
Confidence               34568889999988888888778888888877778899999999987431     2356677899999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccc-hhhhhhhcCCCcccEEE-EcCcccCCCC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGVEYANSIA-FNPSKWLMVH  368 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gie~aDSi~-~d~HK~l~~P  368 (375)
                      .++++..+++|++|.+|+....-. +........  .-+.+. -++.|.++.|
T Consensus       183 ~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~  233 (368)
T PRK03317        183 EAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFA  233 (368)
T ss_pred             HHHHHHCCceEEEeCCchhhcccCCcCHHHHHHh--CCCEEEEEechhhhccc
Confidence            999999999999999998753110 111111111  114443 4999987644

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.21  E-value=4.2e-10  Score=113.15  Aligned_cols=146  Identities=12%  Similarity=0.078  Sum_probs=108.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.++++.|.+                       ..+++++|+.++..++ ...                   .++.
T Consensus        53 ~~Le~~lA~l~g~~-----------------------~~~~~~sG~aai~~~~-~~l-------------------~~Gd   89 (377)
T PRK07671         53 AALEELIAVLEGGH-----------------------AGFAFGSGMAAITAVM-MLF-------------------SSGD   89 (377)
T ss_pred             HHHHHHHHHHhCCC-----------------------ceEEeCCHHHHHHHHH-HHh-------------------CCCC
Confidence            77888899998876                       2478888887654433 211                   1345


Q ss_pred             EEEecCCCchHHHHHH-H---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG-L---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa-~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+..+.+ .   ..|.+++.++.     .|+++|+++|++.      +.+|++..+++++|.+.|+++|++
T Consensus        90 ~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~-----~d~~~l~~ai~~~------tklV~le~P~NPtg~~~dl~~I~~  158 (377)
T PRK07671         90 HVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT-----SNLEEVEEAIRPN------TKAIYVETPTNPLLKITDIKKIST  158 (377)
T ss_pred             EEEECCCccchHHHHHHHHHhcCCeEEEEECC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHH
Confidence            7888888887554432 2   24667777764     3899999998654      347888899999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|++++||++|+......|    .-.   .+|.++.+++||++.|-+
T Consensus       159 la~~~g~~lvvD~a~~~~~~~~p----~~~---g~Divv~S~sK~l~G~~~  202 (377)
T PRK07671        159 IAKEKGLLTIVDNTFMTPYWQSP----ISL---GADIVLHSATKYLGGHSD  202 (377)
T ss_pred             HHHHcCCEEEEECCCCccccCCh----hhh---CCeEEEecCcccccCCcc
Confidence            99999999999999986533222    111   469999999999988754

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.20  E-value=5.6e-10  Score=114.02  Aligned_cols=146  Identities=11%  Similarity=-0.031  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|+++.|.+                       ..+++++|++|+..++.+...                   ++.
T Consensus        61 ~~Le~~lA~l~g~~-----------------------~~l~~ssG~~Ai~~al~al~~-------------------~Gd   98 (425)
T PRK06084         61 DVLEQRVAALEGGV-----------------------GALAVASGMAAITYAIQTIAE-------------------AGD   98 (425)
T ss_pred             HHHHHHHHHHhCCC-----------------------ceeEehhHHHHHHHHHHHHhC-------------------CCC
Confidence            67788889888754                       358999999998888876532                   234


Q ss_pred             EEEecCCCchHHHHHHH-H---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL-I---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~-l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...+......+. .   .+.++..++.     .|+++|+++|+++      +.+|++..+++++|.+-|+++|++
T Consensus        99 ~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~-----~d~e~le~ai~~~------tklV~lesp~NPtG~v~dl~~I~~  167 (425)
T PRK06084         99 NIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH-----DDIAALEALIDER------TKAVFCESIGNPAGNIIDIQALAD  167 (425)
T ss_pred             EEEEeCCCcchHHHHHHHhcccceeEEEEECC-----CCHHHHHHHhccC------CcEEEEeCCCCCCCeecCHHHHHH
Confidence            67777777665554432 2   2445555543     4899999999764      337777889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|++++||++|+.+....|    .-.   .+|.++.++|||++.+-
T Consensus       168 la~~~~i~vVvD~a~a~~~~~~p----~~~---gaDivv~S~tK~l~G~g  210 (425)
T PRK06084        168 AAHRHGVPLIVDNTVATPVLCRP----FEH---GADIVVHSLTKYIGGHG  210 (425)
T ss_pred             HHHHcCCEEEEECCCcccccCCh----hhc---CCCEEEECchhcccccc
Confidence            99999999999999997654322    111   37999999999998664

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.19  E-value=3.4e-10  Score=113.41  Aligned_cols=168  Identities=11%  Similarity=-0.010  Sum_probs=118.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++++.+|+.+..|++.                   ++. ..++|+|+++++..++.+...              
T Consensus        68 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~I~it~Gs~~al~~~~~~l~~--------------  114 (388)
T PRK07366         68 HGTLDFREAAAQWYEQRFGLAV-------------------DPETEVLPLIGSQEGTAHLPLAVLN--------------  114 (388)
T ss_pred             CCCHHHHHHHHHHHHHhhCCcC-------------------CCcCeEEECCCcHHHHHHHHHHhCC--------------
Confidence            4566777888899988888763                   333 477788999988776654322              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                           ++..|++.+.++..+...++..|.+++.||.++  .+.+|.+++++.+...      +.+|+.+.++++||.+  
T Consensus       115 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG~~~s  183 (388)
T PRK07366        115 -----PGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTTAIAP  183 (388)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCCccCC
Confidence                 345788999999999888888889999999864  3568888888776432      3466777799999998  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCc-cc--EEEEcCcccCCCC
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEY-AN--SIAFNPSKWLMVH  368 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~-aD--Si~~d~HK~l~~P  368 (375)
                       +.+++|+++|+++++||++|.+|+-...-.......+..+.. -+  .+.-++.|.++.|
T Consensus       184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~  244 (388)
T PRK07366        184 LSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMG  244 (388)
T ss_pred             HHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence             567788889999999999999998653211000001111211 12  2456899988644

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.19  E-value=1.2e-09  Score=108.21  Aligned_cols=157  Identities=15%  Similarity=0.035  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+++.+++.++.+                     +...++|+|+++++..++.+...                   ++.
T Consensus        62 ~~lr~~ia~~~~~~---------------------~~~i~it~G~~~~l~~~~~~l~~-------------------~gd  101 (351)
T PRK14807         62 EKLREELARYCSVV---------------------PTNIFVGNGSDEIIHLIMLAFIN-------------------KGD  101 (351)
T ss_pred             HHHHHHHHHHhCCC---------------------cccEEEecCHHHHHHHHHHHhcC-------------------CCC
Confidence            45566666667765                     23578999999987766654321                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++++.++..+...++..|.+++.|+.++++.+|+++|++++++.     .+.+|+.+.++++||.+-+.++|.++|++
T Consensus       102 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~  176 (351)
T PRK14807        102 VVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEK  176 (351)
T ss_pred             EEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence            6888888888777777888889999999888899999999998642     13467777899999999999999999999


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ++.++++|++|+...  .......+...+ --.+.-++.|.++.|
T Consensus       177 ~~~~~ivDe~y~~~~--~~~~~~~~~~~~-~vi~~~S~SK~~~~~  218 (351)
T PRK14807        177 SRGIVVVDEAYFEFY--GNTIVDVINEFE-NLIVLRTLSKAFGLA  218 (351)
T ss_pred             CCCEEEEeCcchhhc--ccchHHHhhhCC-CEEEEecchHhcccc
Confidence            899999999997532  111111111111 124567888988644

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.19  E-value=5.4e-10  Score=112.00  Aligned_cols=172  Identities=15%  Similarity=0.073  Sum_probs=112.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+++.+ .|.+.                   ++...++|+|||+++..++.+...               
T Consensus        66 ~g~~~lr~~ia~~~~~-~~~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~---------------  110 (397)
T PRK07568         66 QGIPELREAFAKYYKK-WGIDV-------------------EPDEILITNGGSEAILFAMMAICD---------------  110 (397)
T ss_pred             CCCHHHHHHHHHHHHH-hCCCC-------------------CcceEEEcCChHHHHHHHHHHhcC---------------
Confidence            3455555666666653 35442                   334688999999998877654321               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCC-C-cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc-
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKL-S-LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD-  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g-~-md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD-  312 (375)
                          ++..|++++..+..+...++..|.+++.|+.+ +++ . .++++|++++++.      +.+|+.+.++++||.+- 
T Consensus       111 ----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~  180 (397)
T PRK07568        111 ----PGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPK------TKAILISNPGNPTGVVYT  180 (397)
T ss_pred             ----CCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCcc------ceEEEEECCCCCCCccCC
Confidence                23467788877776666667778899999985 333 3 3579999888543      33677788999999874 


Q ss_pred             --cHHHHHHHHHhcCCEEEEecccccCcccchhhhhh--hcCCCcccEEEEcCcccCCC-CCccee
Q psy1596         313 --NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAGVEYANSIAFNPSKWLMV-HFDCTA  373 (375)
Q Consensus       313 --pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gie~aDSi~~d~HK~l~~-P~~~g~  373 (375)
                        ++++|+++|+++|+++++|.+|+....-.+.....  +.+...--.+.-+++|.++. -.-+|.
T Consensus       181 ~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~  246 (397)
T PRK07568        181 KEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGC  246 (397)
T ss_pred             HHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEE
Confidence              68999999999999999999998753211111111  11111111345588998764 333443

>PRK09148 aminotransferase; Validated

Probab=99.18  E-value=6e-10  Score=112.66  Aligned_cols=169  Identities=11%  Similarity=0.052  Sum_probs=118.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++.+.+|+.+.+|.+.                   .+. ..++|+|+++++..++.+...              
T Consensus        68 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~I~it~G~~~al~~~~~~l~~--------------  114 (405)
T PRK09148         68 KGIPGLRRAQAAYYARRFGVKL-------------------NPDTQVVATLGSKEGFANMAQAITA--------------  114 (405)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEcCChHHHHHHHHHHhcC--------------
Confidence            4666777888888888778763                   233 589999999998777655432              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN--  313 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp--  313 (375)
                           ++..|++++.++..+...+...|.+++.||+++++. +++.++++++....   .+.+|+.+.++++||.+-+  
T Consensus       115 -----~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~~~~---~~~~v~l~~P~NPtG~~~s~~  185 (405)
T PRK09148        115 -----PGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEE-FFPALERAVRHSIP---KPIALIVNYPSNPTAYVADLD  185 (405)
T ss_pred             -----CCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCC-CccCHHHHHhhccc---cceEEEEeCCCCCCCcCCCHH
Confidence                 345788999999888888877888999999865442 45667776654322   2568888889999999854  


Q ss_pred             -HHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         314 -LEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       314 -l~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                       +++|+++|+++++++++|.+|+....-.   +.... +.+......+.-++.|.++.|
T Consensus       186 ~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~-~~~~~~~~i~~~SfSK~~~~p  243 (405)
T PRK09148        186 FYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQ-VPGAKDVTVEFTSMSKTFSMA  243 (405)
T ss_pred             HHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhh-CCCccCcEEEEeccccccCCc
Confidence             5788999999999999999998643211   11111 111111123467899987644

>PRK06855 aminotransferase; Validated

Probab=99.18  E-value=1.1e-09  Score=111.83  Aligned_cols=167  Identities=12%  Similarity=-0.036  Sum_probs=115.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+..|++.                   ++...++|+|+++++..++. ..+               
T Consensus        73 ~G~~~LReaia~~~~~~~g~~~-------------------~~~~I~it~G~~~al~~~~~-l~~---------------  117 (433)
T PRK06855         73 KGVLETREFLAELNNKRGGAQI-------------------TPDDIIFFNGLGDAIAKIYG-LLR---------------  117 (433)
T ss_pred             CCCHHHHHHHHHHHHhccCCCC-------------------CHhHEEEcCcHHHHHHHHHH-hcC---------------
Confidence            5667777889999988878763                   33468899999999766652 211               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                          ++..|++.+.++.....+.. ..+.+++.||++  +++.+|+++|+++++...    .+.+++.+.++|+||.+  
T Consensus       118 ----~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NPTG~~~s  189 (433)
T PRK06855        118 ----REARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNPTGAVYP  189 (433)
T ss_pred             ----CCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCCCCcCCC
Confidence                34578889999887654433 457788888886  346799999999986321    13356667799999998  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                       +.+++|+++|++||+||++|.+|+....-.   +.+...... .+ -.+.-++.|.+.+|
T Consensus       190 ~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~-~~-~I~~~S~SK~~~~p  248 (433)
T PRK06855        190 KEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGD-VP-GIALKGISKELPWP  248 (433)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCc-CC-eEEEecCccccCCC
Confidence             567888899999999999999998753211   111221111 01 14557889987544

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.17  E-value=1.2e-09  Score=110.04  Aligned_cols=137  Identities=10%  Similarity=0.089  Sum_probs=102.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+ .|.+.                   ++...++|+|+++++..++.+...               
T Consensus        73 ~g~~~lr~aia~~~~~-~~~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~---------------  117 (401)
T TIGR01264        73 VGALSAREAIASYYHN-PDGPI-------------------EADDVVLCSGCSHAIEMCIAALAN---------------  117 (401)
T ss_pred             CCCHHHHHHHHHHHhh-cCCCC-------------------CHHHEEECcChHHHHHHHHHHhCC---------------
Confidence            3455566666677665 23332                   234578999999998877765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.++..+...+...|.+++.++.+  +++.+|++.|++++++.      +.+|+.+.++++||.+   
T Consensus       118 ----~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~  187 (401)
T TIGR01264       118 ----AGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEK------TAALIVNNPSNPCGSVFSR  187 (401)
T ss_pred             ----CCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccC------ceEEEEcCCCCCCCCCCCH
Confidence                23468888888888887788778888888875  35789999999988643      2366777899999988   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +++++|+++|+++|+++++|.+|....
T Consensus       188 ~~~~~l~~~a~~~~~~ii~De~y~~~~  214 (401)
T TIGR01264       188 QHLEEILAVAERQCLPIIADEIYGDMV  214 (401)
T ss_pred             HHHHHHHHHHHHCCCEEEEEhhhhhhc
Confidence            569999999999999999999998653

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.16  E-value=6.7e-10  Score=111.11  Aligned_cols=146  Identities=14%  Similarity=0.064  Sum_probs=109.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++.|.+                       ..++++||+.++..++ ....                   ++.
T Consensus        55 ~~le~~la~l~g~~-----------------------~~~~~~sG~~ai~~~~-~ll~-------------------~Gd   91 (366)
T PRK08247         55 GVLEQAIADLEGGD-----------------------QGFACSSGMAAIQLVM-SLFR-------------------SGD   91 (366)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEEcCHHHHHHHHH-HHhC-------------------CCC
Confidence            77888999999886                       1488999998876543 2211                   234


Q ss_pred             EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+.+...    .+...|.+++.++.     .|+++|+++|++.      +.+|+...+++++|.+.++++|++
T Consensus        92 ~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~-----~d~~~l~~~i~~~------tklv~le~P~NP~~~~~dl~~I~~  160 (366)
T PRK08247         92 ELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT-----ASLKAIEQAITPN------TKAIFIETPTNPLMQETDIAAIAK  160 (366)
T ss_pred             EEEEecCCcCcHHHHHHHHhhccCceEEEECC-----CCHHHHHHhcccC------ceEEEEECCCCCCCcHHHHHHHHH
Confidence            67788887765433    33345678887775     3899999998653      347888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|+++++|.+|+......|.    -   ..+|.++.+++|++..+-+
T Consensus       161 la~~~g~~lIvD~t~~~~~~~~p~----~---~g~di~i~S~sK~~~g~~d  204 (366)
T PRK08247        161 IAKKHGLLLIVDNTFYTPVLQRPL----E---EGADIVIHSATKYLGGHND  204 (366)
T ss_pred             HHHHcCCEEEEECCCccccccCch----h---cCCcEEEeecceeccCCCc
Confidence            999999999999999765443221    1   2479999999999986543

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.16  E-value=7.7e-10  Score=110.06  Aligned_cols=153  Identities=14%  Similarity=0.019  Sum_probs=107.0

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |...+++++.+++++++|.+.                     ...++++||+++|..++.+..+                
T Consensus        51 g~~~~~~~Le~~lA~~~g~~~---------------------e~ilv~~gg~~a~~~~~~al~~----------------   93 (346)
T TIGR03576        51 GPAIFEEKVQELGREHLGGPE---------------------EKILVFNRTSSAILATILALEP----------------   93 (346)
T ss_pred             CCHHHHHHHHHHHHHHcCCCc---------------------ceEEEECCHHHHHHHHHHHhCC----------------
Confidence            566888999999999999962                     2479999999999988876532                


Q ss_pred             hhcCceEEEe---cCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         238 EINSRLVAYC---SDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       238 ~~~~~~vV~~---S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                         ++..|++   +...|.|+..++++.+.+++.+       .|+++|+.    . .   .+.+|+.| |++++|.+   
T Consensus        94 ---~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~-------~~l~~l~~----~-~---~~~lIiit-g~s~~G~v~~~  154 (346)
T TIGR03576        94 ---PGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES-------DELSELKK----I-D---GTSLVVIT-GSTMDLKVVSE  154 (346)
T ss_pred             ---CCCEEEECCCCCCCchhHHHHHHHcCCEEecc-------CCHHHHhh----C-c---CceEEEEE-CCCCCCcccCH
Confidence               2334553   3679999999998887765332       14444322    1 1   13355555 67889998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccc-hhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      ++|++|+++|+++|+|++||.||+.+.... ........   .+|.+..+++|++..+.
T Consensus       155 ~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~---~~divv~s~SKalaG~r  210 (346)
T TIGR03576       155 EDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDL---GADLVVTSTDKLMDGPR  210 (346)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHc---CCcEEEeccchhccccc
Confidence            899999999999999999999999764321 11000011   25889999999764443

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PRK08175 aminotransferase; Validated

Probab=99.16  E-value=1.3e-09  Score=109.62  Aligned_cols=169  Identities=12%  Similarity=0.075  Sum_probs=118.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++.+.+|+.+..|++.                   ++. ..++|+|++++....+.+...              
T Consensus        67 ~G~~~lr~aia~~~~~~~g~~~-------------------~~~~~i~~t~G~~~~l~~~~~~~~~--------------  113 (395)
T PRK08175         67 RGIPRLRRAISRWYQDRYDVDI-------------------DPESEAIVTIGSKEGLAHLMLATLD--------------  113 (395)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEccCcHHHHHHHHHHhCC--------------
Confidence            4677788889999998888763                   233 578899998987665443221              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN--  313 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp--  313 (375)
                           ++..|++++.++......+...|.+++.||.++++ .++++|+++++....   .+.+|+.+.++++||.+-+  
T Consensus       114 -----~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~l~~~l~~~~~---~~~~v~i~~p~NPtG~~~~~~  184 (395)
T PRK08175        114 -----HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV-DFFNELERAIRESYP---KPKMMILGFPSNPTAQCVELE  184 (395)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCC-CcHHHHHHHHhhccC---CceEEEEeCCCCCCCCCCCHH
Confidence                 34578899999988888887778899999987543 468999998865211   2457777778999998744  


Q ss_pred             -HHHHHHHHHhcCCEEEEecccccCccc---chhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         314 -LEELGPICEKEGLWLHVDAAYAGSSFI---CPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       314 -l~eI~~ia~~~~iwlHVDaA~gg~~~~---~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                       +++|+++|+++|+++++|.+|+....-   .+.+.. +.+......++.++.|.++.|
T Consensus       185 ~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~p  242 (395)
T PRK08175        185 FFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQ-VPGAKDVAVEFFTLSKSYNMA  242 (395)
T ss_pred             HHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhc-CCCcccCEEEEeeccccccCc
Confidence             589999999999999999999764321   111111 111111123568999998655

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.14  E-value=1.6e-09  Score=107.18  Aligned_cols=154  Identities=12%  Similarity=0.062  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++++++.+|.+                    .....++|+|+++++..++.+..+                   ++.
T Consensus        66 ~~lr~~ia~~~~~~--------------------~~~~I~~t~G~~~~i~~~~~~~~~-------------------~gd  106 (356)
T PRK04870         66 AALKAALRAAMGVP--------------------AGADVLLGNGSDELIQLLALACAK-------------------PGA  106 (356)
T ss_pred             HHHHHHHHHHhCcC--------------------CCCcEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence            56677788888876                    212467888888877665544321                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++++.++..+...+...|.+++.+|.++++.+|+++|++++.+..     +.+|+.+.++|+||.+-+.+++.++++.
T Consensus       107 ~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~~~  181 (356)
T PRK04870        107 TVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHR-----PALVFLAYPNNPTGNLFDDADVERIIEA  181 (356)
T ss_pred             EEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHH
Confidence            78899999998888888889999999998888999999999986421     3367777899999999888888888777


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCccc
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKW  364 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~  364 (375)
                      .++++++|++|.....  ..+...+...++ --+.-++.|+
T Consensus       182 ~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~~~S~SK~  219 (356)
T PRK04870        182 APGLVVVDEAYQPFAG--DSWLPRLARFPN-LLVMRTVSKL  219 (356)
T ss_pred             CCCEEEEECCchhhcC--cchHHHHhhCCC-EEEEecchhh
Confidence            6899999999975421  111111222222 2467788894

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.14  E-value=1.9e-09  Score=106.33  Aligned_cols=152  Identities=12%  Similarity=-0.055  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++.+++.++.+                     +...++|+|+++++..++.+..+                   ++.
T Consensus        63 ~~lr~aia~~~~~~---------------------~~~I~it~G~~~al~~~~~~l~~-------------------~gd  102 (353)
T PRK05387         63 DALRQAIAAYYGLD---------------------PEQVFVGNGSDEVLAHAFLAFFN-------------------HDR  102 (353)
T ss_pred             HHHHHHHHHHhCCC---------------------HHHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence            46677777777765                     23589999999998887765532                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++++.+|..+...+...|.+++.+|.++++.+|+++|++    .      ..+|+.+.++|+||.+-+.+++.++++.
T Consensus       103 ~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~  172 (353)
T PRK05387        103 PLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR----P------NGGIIFPNPNAPTGIALPLAEIERILAA  172 (353)
T ss_pred             EEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh----c------CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence            78899998877776677778899999998889999999863    1      1257788899999999999999999987


Q ss_pred             c-CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         324 E-GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       324 ~-~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      + ++++++|.+|+-..-.  .........+ -..+..++.|.++.|
T Consensus       173 ~~~~~livDe~y~~~~~~--~~~~~~~~~~-~~i~~~S~SK~~~~~  215 (353)
T PRK05387        173 NPDSVVVIDEAYVDFGGE--SAIPLIDRYP-NLLVVQTFSKSRSLA  215 (353)
T ss_pred             CCCcEEEEeCcccccCCc--chHHHHhhCC-CEEEEEehhHhhcch
Confidence            6 9999999999643211  1111111111 246788999987644

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.14  E-value=1.3e-09  Score=111.56  Aligned_cols=148  Identities=13%  Similarity=0.088  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.++++.|-.                       ..+.+++|+.|+.+++.+...                   ++.
T Consensus        64 ~~lE~~la~leg~~-----------------------~av~~~SG~aAi~~al~all~-------------------~GD  101 (432)
T PRK06702         64 AAFEQKLAELEGGV-----------------------GAVATASGQAAIMLAVLNICS-------------------SGD  101 (432)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHhcC-------------------CCC
Confidence            67788888887765                       368999999999999876521                   345


Q ss_pred             EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...+.+....    +...|.+++.+.    ..+|+++|+++|++.+      .+|++..++++++.+-||++|++
T Consensus       102 ~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd----~~~d~~~l~~~I~~~T------k~I~~e~pgnP~~~v~Di~~I~~  171 (432)
T PRK06702        102 HLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN----PNLTADEIVALANDKT------KLVYAESLGNPAMNVLNFKEFSD  171 (432)
T ss_pred             EEEECCCchHHHHHHHHHHHHHCCCEEEEEC----CCCCHHHHHHhCCcCC------eEEEEEcCCCccccccCHHHHHH
Confidence            899999988766665    334567777774    3479999999997653      36777889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|+++.+|.+|+...+.-|    +-.|   ||-+.-|..||+...-+
T Consensus       172 iA~~~gi~livD~T~~tP~~~~p----l~~G---ADIvv~S~TKy~~Ghsd  215 (432)
T PRK06702        172 AAKELEVPFIVDNTLATPYLCQA----FEHG---ANIIVHSTTKYIDGHAS  215 (432)
T ss_pred             HHHHcCCEEEEECCCCchhhCCh----hhcC---CCEEEEccccccCCCcc
Confidence            99999999999999975433222    1223   79999999998776543

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.13  E-value=2e-09  Score=108.26  Aligned_cols=171  Identities=12%  Similarity=0.022  Sum_probs=117.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCc--EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNF--ITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~--GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .|..++++++.+|+.+.-+...                   ++..  +++|+|+++|+..++.+....            
T Consensus        69 ~G~~~lR~aia~~~~~~~~~~~-------------------~~~~i~v~iT~Ga~~al~~~~~~l~~~------------  117 (396)
T PRK09257         69 EGLAAYRQAVQELLFGADSPAL-------------------AAGRVATVQTPGGTGALRVGADFLKRA------------  117 (396)
T ss_pred             CCCHHHHHHHHHHhcCCCCccc-------------------ccCeEEEEecCCccHHHHHHHHHHHHh------------
Confidence            5666677777888765432211                   1223  489999999988876533210            


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec-C-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES-D-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-  311 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-  311 (375)
                           .++..|++.+.++..+...+...|.+++.+|. + +++.+|+++|++++++...   ...+++.+.++|+||.+ 
T Consensus       118 -----~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~---~~~~~i~~~p~NPTG~~~  189 (396)
T PRK09257        118 -----FPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPA---GDVVLLHGCCHNPTGADL  189 (396)
T ss_pred             -----CCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCC
Confidence                 13468999999999999999988999999997 3 4578999999999874211   13466667789999987 


Q ss_pred             --ccHHHHHHHHHhcCCEEEEecccccCccc-chhhhhh--hcCC-CcccEEEEcCcccCCC
Q psy1596         312 --DNLEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKW--LAGV-EYANSIAFNPSKWLMV  367 (375)
Q Consensus       312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~--~~gi-e~aDSi~~d~HK~l~~  367 (375)
                        +.+++|+++|++|++|+++|.+|.....- .+.....  +.+. +++ .+.-++.|.++.
T Consensus       190 s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~v-i~i~SfSK~~~~  250 (396)
T PRK09257        190 TPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLEL-LVASSFSKNFGL  250 (396)
T ss_pred             CHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcE-EEEEEcCCcCcc
Confidence              67888999999999999999999875421 0011110  1111 121 456789998765

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.13  E-value=2.1e-09  Score=106.63  Aligned_cols=155  Identities=13%  Similarity=0.080  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+++.+++.+|.+.                     ...++|+|+++++..++.+. .                   ++.
T Consensus        58 ~~lr~~ia~~~~~~~---------------------~~i~it~Ga~~~l~~~~~~l-~-------------------~g~   96 (356)
T PRK08056         58 RHLHQALARHHQVPA---------------------SWILAGNGETESIFAVVSGL-K-------------------PRR   96 (356)
T ss_pred             HHHHHHHHHHhCcCh---------------------hhEEECCCHHHHHHHHHHHh-C-------------------CCC
Confidence            567778888888762                     35788999999877665532 1                   122


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELG  318 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~  318 (375)
                      ++ +...++..+...++..|.+++.+|.++  ++.+| +++++.+.+      .+.+|+.+.++++||.+-+   +++|+
T Consensus        97 vi-v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~  168 (356)
T PRK08056         97 AM-IVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIA  168 (356)
T ss_pred             EE-EeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHH
Confidence            33 445666666677788888999999864  34455 344454432      1336777889999999866   88899


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ++|+++++|+++|++|.....-...+-..+... ....+..+++|+++.|
T Consensus       169 ~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~  217 (356)
T PRK08056        169 ERCKSLNIALILDEAFIDFIPDETGFIPQLADN-PHLWVLRSLTKFYAIP  217 (356)
T ss_pred             HHHHhcCCEEEEecchhccCCcchHHHHHhccC-CCEEEEEechhhccCc
Confidence            999999999999999976532111111112222 2356789999998844

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.13  E-value=8.9e-10  Score=110.66  Aligned_cols=142  Identities=13%  Similarity=0.102  Sum_probs=107.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++.+.+|+.+..|++.+         +        ++ ...++|+|++++...++.+..+.          +  
T Consensus        64 ~G~~~lr~aia~~~~~~~~~~~~---------~--------~~~~~i~it~Ga~~al~~~~~~l~~~----------g--  114 (393)
T TIGR03538        64 KGLPELRQAIARWLERRFDLPTG---------V--------DPERHVLPVNGTREALFAFAQAVINP----------G--  114 (393)
T ss_pred             CCCHHHHHHHHHHHHHhhCCccc---------C--------CCCceEEECCCcHHHHHHHHHHHcCC----------C--
Confidence            45667778888999888887610         0        22 24788999999987776654321          0  


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                           ....|++++.++..+...++..|.+++.||+++  ++.+|+++|++++.+.      +.+|+.+.++++||.+  
T Consensus       115 -----d~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPtG~~~s  183 (393)
T TIGR03538       115 -----QAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRR------CQLLFVCSPGNPTGAVLS  183 (393)
T ss_pred             -----CcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhc------ceEEEEeCCCCCcCcccC
Confidence                 112488888998888887888888999999853  3678999999988653      3366677899999988  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                       +.+++|+++|++|+++|++|.+|+-..
T Consensus       184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~  211 (393)
T TIGR03538       184 LDTLKKLIELADQYGFIIASDECYSELY  211 (393)
T ss_pred             HHHHHHHHHHHHHCCEEEEECcchhhcc
Confidence             458999999999999999999998643

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.12  E-value=2.9e-09  Score=107.01  Aligned_cols=160  Identities=14%  Similarity=0.050  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.++|++++|.+                    .....+|++||++||..|+.+++...                 ++.
T Consensus        88 ~~la~~l~~~~~~~--------------------~~~~v~~~~sgsea~~~al~~~~~~g-----------------~~~  130 (398)
T PRK03244         88 IALAERLVELLGAP--------------------EGGRVFFCNSGAEANEAAFKLARLTG-----------------RTK  130 (398)
T ss_pred             HHHHHHHHHhCCCC--------------------CCCEEEEeCchHHHHHHHHHHHHHHC-----------------CCe
Confidence            67889999988754                    22468999999999999999887620                 123


Q ss_pred             EEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                      +|.....-|.+...+..+.+.            ++..+|.     .|+++|++++.+      .+.+|++.-..+++|.+
T Consensus       131 ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~------~~~aviiep~~~~~G~~  199 (398)
T PRK03244        131 IVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDD------DTAAVFLEPIQGEAGVV  199 (398)
T ss_pred             EEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhcC------CeEEEEEecccCCCCCc
Confidence            455555556665555544332            2333332     378999988842      24466677677889998


Q ss_pred             cc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      -|    +++|.++|++||+++++|++|++.......+.....++ ..|.+++  .|+++..+..|.+
T Consensus       200 ~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~  263 (398)
T PRK03244        200 PPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGAC  263 (398)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEE
Confidence            66    99999999999999999999987432211111112344 4677766  5998865666654

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.12  E-value=2.2e-10  Score=114.06  Aligned_cols=158  Identities=11%  Similarity=-0.077  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC-hHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT-ASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG-GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ++-+++++.++++||.+                    .+...+||+| ||+++-.++......                .
T Consensus        44 ~~~~~~r~~l~~l~~~~--------------------~~~~vvf~~gs~T~a~~~~~~~l~~~----------------~   87 (355)
T cd00611          44 AIVNEAESDLRELLNIP--------------------DNYKVLFLQGGATGQFAAVPLNLLGD----------------K   87 (355)
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCceEEEEcCCchHHHHHHHHhcCCC----------------C
Confidence            33478899999999986                    3456899988 999977666543110                0


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCc-C-HHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSL-R-GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~m-d-~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      .+.++|+.....|.+..-+ +-.+.+++.++.+++|.. + ++..+..+.++      +.+|+++..+|.+|.+  ++  
T Consensus        88 ~~~~~i~~g~~~~~~~~~a-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~lV~~~h~~t~tG~~--~~--  156 (355)
T cd00611          88 GTADYVVTGAWSAKAAKEA-KRYGGVVVIVAAKEEGKYTKIPDVETWDLAPD------AAYVHYCSNETIHGVE--FD--  156 (355)
T ss_pred             CeEEEEECCHHHHHHHHHH-HhcCCCcEEEecccccCCCCCCCHhhcCCCCC------CCEEEEeCCcccccEE--cc--
Confidence            1345677776666664333 333578888887655433 4 23232333322      4489999999999997  22  


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                       ++++.+|+.+.|||+++.+....+- +       ..|.+..++||+++ |.|.|++|
T Consensus       157 -~i~~~~g~~~~VDa~qs~g~~~idv-~-------~~~~~~ss~~K~lG-P~G~g~l~  204 (355)
T cd00611         157 -EVPDTGGVPLVADMSSNILSRPIDV-S-------KFGVIYAGAQKNLG-PAGVTVVI  204 (355)
T ss_pred             -eecccCCCeEEEEccccccCCCCCH-H-------HhCEEEeecccccC-CCceEEEE
Confidence             4555699999999999999764321 1       12434455999765 99999985

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK03321 putative aminotransferase; Provisional

Probab=99.11  E-value=1.5e-09  Score=107.13  Aligned_cols=129  Identities=9%  Similarity=0.004  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++.+++++|.+                     +...++|+|+++++..++.+..                   .++.
T Consensus        60 ~~lr~~ia~~~~~~---------------------~~~I~~~~G~~~~l~~~~~~~~-------------------~~gd   99 (352)
T PRK03321         60 VELRAALAEHLGVP---------------------PEHVAVGCGSVALCQQLVQATA-------------------GPGD   99 (352)
T ss_pred             HHHHHHHHHHhCcC---------------------HHHEEECCCHHHHHHHHHHHhc-------------------CCCC
Confidence            55667777777765                     2357888888877665544321                   1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..+.......++..|.+++.+|.++++.+|++++++++++.      +.+|+.+.+++++|.+-+.++|.++|++
T Consensus       100 ~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~l~~l~~~  173 (352)
T PRK03321        100 EVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDR------TRLIFVCNPNNPTGTVVTPAELARFLDA  173 (352)
T ss_pred             EEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence            6778877766666666777889999999867889999999988642      3367777899999999999999999987


Q ss_pred             --cCCEEEEecccccCc
Q psy1596         324 --EGLWLHVDAAYAGSS  338 (375)
Q Consensus       324 --~~iwlHVDaA~gg~~  338 (375)
                        +++++++|++|+...
T Consensus       174 ~~~~~~ii~De~y~~~~  190 (352)
T PRK03321        174 VPADVLVVLDEAYVEYV  190 (352)
T ss_pred             CCCCeEEEEechHHHhc
Confidence              599999999998653

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.11  E-value=2.5e-09  Score=105.91  Aligned_cols=162  Identities=14%  Similarity=0.041  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++++++.+|.+.                     ...++|+|+++++..++.+..+                   ++.
T Consensus        67 ~~lr~~ia~~~~~~~---------------------~~i~~t~G~~~~l~~~~~~~~~-------------------~gd  106 (359)
T PRK03158         67 PELRTKVAKHLGVDE---------------------EQLLFGAGLDEVIQMISRALLN-------------------PGT  106 (359)
T ss_pred             HHHHHHHHHHhCCCH---------------------HHEEECCCHHHHHHHHHHHHhC-------------------CCC
Confidence            556777777777651                     3578999999987655443321                   245


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++++.++..+...+...|.+++.+|.+ ++.+|+++|++++++.      +.+|+.+.++++||.+-+.++|.++++.
T Consensus       107 ~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~l~~~~~~  179 (359)
T PRK03158        107 NTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAIDEQ------TKIVWICNPNNPTGTYVNHEELLSFLES  179 (359)
T ss_pred             EEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence            78899999988888888888899999997 6789999999887542      3366778899999999999999988887


Q ss_pred             --cCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596         324 --EGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       324 --~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                        +|+++++|.+|+....-.  +.....+... .-..+.-++.|.++.| .-+|.
T Consensus       180 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~  233 (359)
T PRK03158        180 VPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGY  233 (359)
T ss_pred             CCCCcEEEEECchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhheh
Confidence              599999999997654211  1110111111 1134556888987644 33343

>PRK09105 putative aminotransferase; Provisional

Probab=99.10  E-value=4.2e-09  Score=105.39  Aligned_cols=160  Identities=13%  Similarity=0.038  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++.+++.+|++.                     ...++|+|+++++..++.+..+                   ++.
T Consensus        81 ~~Lr~aia~~~~v~~---------------------e~I~it~Gs~~ai~~~~~~l~~-------------------~gd  120 (370)
T PRK09105         81 DDLRTLFAAQEGLPA---------------------DHVMAYAGSSEPLNYAVLAFTS-------------------PTA  120 (370)
T ss_pred             HHHHHHHHHHhCcCh---------------------hhEEEcCChHHHHHHHHHHHcC-------------------CCC
Confidence            456666777788762                     3588999999998877765422                   245


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++++.+|..+...++..|.+++.+|.++++.+|+++|++.. +.      +.+|+.+.++++||.+-+.++|.++++.
T Consensus       121 ~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~  193 (370)
T PRK09105        121 GLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAAD-PN------AGLIYICNPNNPTGTVTPRADIEWLLAN  193 (370)
T ss_pred             EEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcC-CC------CCEEEEeCCCCCCCcCcCHHHHHHHHHh
Confidence            7888999999998888888899999999888899999998752 11      3367778899999999888888777654


Q ss_pred             --cCCEEEEecccccCcccchhhhhhhcCCCcccEEEE-cCcccCCCC-Cccee
Q psy1596         324 --EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF-NPSKWLMVH-FDCTA  373 (375)
Q Consensus       324 --~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~-d~HK~l~~P-~~~g~  373 (375)
                        +++|+++|.+|.-+.. .+.......  ...+.+++ ++.|.++.| +-+|.
T Consensus       194 ~~~~~~lIvDEaY~~f~~-~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~  244 (370)
T PRK09105        194 KPAGSVLLVDEAYIHFSD-APSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGL  244 (370)
T ss_pred             CCCCcEEEEECchHHhcc-CcchHHHHh--hCCCEEEEecccHhhcCCccceee
Confidence              4899999999954321 111111111  12355665 677876533 22444

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.09  E-value=2.1e-09  Score=106.68  Aligned_cols=162  Identities=11%  Similarity=-0.036  Sum_probs=109.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.+++++|.+.                     ...++|+|+++++...+.+...                   ++.
T Consensus        70 ~~lr~~ia~~~~~~~---------------------~~i~~t~G~~~~l~~~~~~l~~-------------------~gd  109 (367)
T PRK02731         70 FELKAALAEKFGVDP---------------------ERIILGNGSDEILELLARAYLG-------------------PGD  109 (367)
T ss_pred             HHHHHHHHHHhCcCH---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence            456677777777751                     3468888888876554433211                   234


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++++.+|..+...+...|.+++.+|. +++.+|+++|++++++.      +.+|+.+.++++||.+-+.++|.++++.
T Consensus       110 ~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~  182 (367)
T PRK02731        110 EVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAG  182 (367)
T ss_pred             EEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHh
Confidence            7888888887777666777889999998 45779999999988632      4477778999999999999999999887


Q ss_pred             c--CCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         324 E--GLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       324 ~--~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      .  ++|+++|++|.....-.   +.. ..+..-++ ..+..++.|.++.| +.+|.+
T Consensus       183 ~~~~~~li~De~y~~~~~~~~~~~~~-~~~~~~~~-~i~~~S~SK~~g~~G~RiG~l  237 (367)
T PRK02731        183 VPPDVLVVLDEAYAEYVRRKDYEDGL-ELVAKFPN-VVVTRTFSKAYGLAGLRVGYG  237 (367)
T ss_pred             CCCCcEEEEECcHHHhccCcCcccHH-HHHhhcCC-EEEEeeehHhhcCcccceeee
Confidence            5  89999999997643211   111 11111111 23444778976533 455654

>PRK06460 hypothetical protein; Provisional

Probab=99.08  E-value=2.9e-09  Score=107.07  Aligned_cols=145  Identities=13%  Similarity=0.002  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++|++++..++.+...                   ++.
T Consensus        48 ~~L~~~lA~l~g~~-----------------------~~v~~~sG~~ai~~~l~al~~-------------------~Gd   85 (376)
T PRK06460         48 LELTKKIVELENAE-----------------------MGVAFSSGMGAISTTALALLK-------------------PGN   85 (376)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence            67788899998876                       146678888887776654321                   234


Q ss_pred             EEEecCCCc----hHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAH----SSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH----~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...+    ..+.+.+...|.+++.++.++     .+.+++++++      .+.+|++..+++++|.+-|+++|++
T Consensus        86 ~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~-----~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~  154 (376)
T PRK06460         86 SVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGS-----DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSK  154 (376)
T ss_pred             EEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCC-----HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHH
Confidence            666765433    333445566677888887642     2334443322      2458888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|+++|++++||++|+.+....    .+..   .+|.++.++||+++.+
T Consensus       155 la~~~g~~vivDea~~~~~~~~----~l~~---~~divv~S~sK~l~G~  196 (376)
T PRK06460        155 VCKENGSILIVDATFSTPINQK----PLEL---GADIVVHSASKFLAGH  196 (376)
T ss_pred             HHHHcCCEEEEECCcCccccCC----hhhc---CCCEEEeecceeccCC
Confidence            9999999999999998653211    1111   3699999999998643

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.08  E-value=1.4e-09  Score=108.91  Aligned_cols=149  Identities=13%  Similarity=0.073  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++.|-+                       .+++++||++|+..++. +..                   ++.
T Consensus        57 ~~le~~lA~leg~~-----------------------~~v~~~sG~aAi~~~l~-~l~-------------------~GD   93 (364)
T PRK07269         57 AKLEETLAAIESAD-----------------------YALATSSGMSAIVLAFS-VFP-------------------VGS   93 (364)
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHH-HhC-------------------CCC
Confidence            67778888887654                       47999999999887773 211                   234


Q ss_pred             EEEecCCCchHHHHHHHH--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLI--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      .|+++...+.....-...  ....   +..  .+.+|+++++++|++.      +.+|++..+++++|.+-|+++|+++|
T Consensus        94 ~VI~~~~~yg~~~~~~~~~~~~~~---~~~--~~~~d~~~l~~~i~~~------TklV~lesP~NPtg~~~di~~I~~la  162 (364)
T PRK07269         94 KVVAVRDLYGGSFRWFNQQEKEGR---FHF--TYANTEEELIAAIEED------TDIVYIETPTNPLMVEFDIEKVAKLA  162 (364)
T ss_pred             EEEEecCCcCchHHHHHHHHhcCc---EEE--EecCCHHHHHHhcCcC------ceEEEEECCCCCCCeeeCHHHHHHHH
Confidence            567776665433332211  1111   111  1236899999999754      34888999999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--cee
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTA  373 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~  373 (375)
                      +++|++++||.+|+......|    .  + ..+|.++.|+||++..+-+  .|+
T Consensus       163 ~~~gi~vvvD~t~~~~~~~~p----l--~-~gaDivv~S~tK~l~g~~d~~gG~  209 (364)
T PRK07269        163 HAKGAKVIVDNTFYSPIYQRP----I--E-LGADIVLHSATKYLSGHNDVLAGV  209 (364)
T ss_pred             HHcCCEEEEECCCcccccCCc----h--h-hCCcEEEecCceeccCCCcccceE
Confidence            999999999999876543222    1  1 1479999999999987776  454

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=99.07  E-value=3.2e-09  Score=105.31  Aligned_cols=156  Identities=13%  Similarity=0.044  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC-c
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS-R  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~-~  242 (375)
                      .++.+++++.+|++.                     ...++|+|+++++..++.+...                   + +
T Consensus        60 ~~l~~~~a~~~g~~~---------------------~~I~~~~Gs~e~i~~~~~~~~~-------------------~g~   99 (351)
T PRK01688         60 KAVIENYAAYAGVKP---------------------EQVLVSRGADEGIELLIRAFCE-------------------PGK   99 (351)
T ss_pred             HHHHHHHHHHhCCCH---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence            688899999999872                     3578999999998777655322                   2 2


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      ..|++++.+|..+...++..|.+++.||.++++.+|+++|+++++ .      +.+|+.+.++++||.+-+.++|.++++
T Consensus       100 ~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~-~------~~lv~l~nPnNPTG~~~~~~~l~~l~~  172 (351)
T PRK01688        100 DAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNLD-G------VKVVYVCSPNNPTGNLINPQDLRTLLE  172 (351)
T ss_pred             CEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhcc-C------CcEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence            468889999999888888888999999998889999999998873 2      336777899999999987777666655


Q ss_pred             hc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         323 KE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       323 ~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ..  +.++++|+||.-+... +.....+...+. =.+.-++.|+++.|
T Consensus       173 ~~~~~~~vivDEay~~f~~~-~s~~~~~~~~~n-~iv~rSfSK~~gla  218 (351)
T PRK01688        173 LTRGKAIVVADEAYIEFCPQ-ASLAGWLAEYPH-LVILRTLSKAFALA  218 (351)
T ss_pred             hCCCCcEEEEECchhhcCCC-CChHHHHhhCCC-EEEEecchHhhcCH
Confidence            32  6899999999765311 111112211111 13567888977633

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.07  E-value=3.6e-09  Score=106.90  Aligned_cols=173  Identities=10%  Similarity=0.010  Sum_probs=118.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEE--EeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFIT--FQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gv--ftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .|..++++++.+|+.+.-+.+.                   ++...+  .|.||++|...++.+.+.-.           
T Consensus        72 ~G~~~lR~aia~~~~~~~~~~~-------------------~~~~v~~~~t~G~~~al~~~~~~l~~~~-----------  121 (404)
T PTZ00376         72 EGLQSFIEAAQKLLFGEASYAL-------------------AEKRIATVQALSGTGALRLGFEFLKRFL-----------  121 (404)
T ss_pred             CCCHHHHHHHHHHhcCCCcccc-------------------ccCeEEEeeccCcchHHHHHHHHHHHhc-----------
Confidence            5666677777888755433221                   222445  48899999877665443211           


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-  311 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-  311 (375)
                           .++..|++.+.++..+...++..|.+++.||..  +++.+|++.+++++++...   ...+++.+.++|+||.+ 
T Consensus       122 -----~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~NPTG~~~  193 (404)
T PTZ00376        122 -----PAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHNPTGVDP  193 (404)
T ss_pred             -----CCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCC
Confidence                 135689999999999999999999999999983  4588999999999975321   13467778899999988 


Q ss_pred             --ccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCC-Ccc-c-EEEEcCcccCCCC
Q psy1596         312 --DNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGV-EYA-N-SIAFNPSKWLMVH  368 (375)
Q Consensus       312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gi-e~a-D-Si~~d~HK~l~~P  368 (375)
                        +.+++|+++|++|++|+++|.+|.....-..  .... ...+ +.. . .+.-++.|.+++|
T Consensus       194 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~~~  256 (404)
T PTZ00376        194 TEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYA-IRLFAERGVEFLVAQSFSKNMGLY  256 (404)
T ss_pred             CHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHH-HHHHHhcCCcEEEEEeCCCccccc
Confidence              6788889999999999999999986543110  1110 1111 111 2 4556889988754

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.06  E-value=3.7e-09  Score=105.45  Aligned_cols=157  Identities=13%  Similarity=0.049  Sum_probs=109.6

Q ss_pred             HHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceE
Q psy1596         165 KVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV  244 (375)
Q Consensus       165 ~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~v  244 (375)
                      .+++++++.+|.+.                     ...++|+|+++++...+.+...                   ++..
T Consensus        75 ~lr~~ia~~~~~~~---------------------~~i~~t~G~~~~l~~~~~~~~~-------------------~gd~  114 (371)
T PRK05166         75 ALREAIAARTGVPA---------------------DRIILGNGSEDLIAVICRAVLR-------------------PGDR  114 (371)
T ss_pred             HHHHHHHHHhCcCH---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCCE
Confidence            56677788888762                     3578999999987665544311                   3457


Q ss_pred             EEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh-
Q psy1596         245 AYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK-  323 (375)
Q Consensus       245 V~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~-  323 (375)
                      |++...++......++..|.+++.||.++++.+|+++|++++++.      +.+|+.+.++++||.+-+.+++.++++. 
T Consensus       115 vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~~  188 (371)
T PRK05166        115 VVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVARA------PRMLMFSNPSNPVGSWLTADQLARVLDAT  188 (371)
T ss_pred             EEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence            888999998888888888889999999888899999999988653      2367778999999999877766666653 


Q ss_pred             -cCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         324 -EGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       324 -~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                       .++++++|++|+-...-.  +.....+.....--.+.-++.|.++.
T Consensus       189 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l  235 (371)
T PRK05166        189 PPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGL  235 (371)
T ss_pred             CCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhc
Confidence             489999999998654100  11111111110011356688998763

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.05  E-value=2.5e-09  Score=108.81  Aligned_cols=138  Identities=14%  Similarity=0.007  Sum_probs=102.0

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHH
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGD  280 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e  280 (375)
                      ..++|+|+++++..++.+..+                   ++..|++.+.++..+...+...|.+++.||++++| +|++
T Consensus       143 ~Iiit~G~~~al~~~~~~l~~-------------------pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~  202 (431)
T PRK15481        143 EIDLTSGAIDAIERLLCAHLL-------------------PGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPE  202 (431)
T ss_pred             eEEEecCcHHHHHHHHHHhCC-------------------CCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHH
Confidence            588999999998877765432                   34578999999999999998888999999997765 9999


Q ss_pred             HHHHHHHHhhhcCCccEEEEEE-cCCCCccccccH---HHHHHHHHhc-CCEEEEecccccCcccchhhhhhhcCCCccc
Q psy1596         281 KLIEAIERDKKKHLIPFFVCGT-LGTTGACAFDNL---EELGPICEKE-GLWLHVDAAYAGSSFICPEFRKWLAGVEYAN  355 (375)
Q Consensus       281 ~Le~aI~~~~~~g~~p~~Vv~t-~GtT~tGavDpl---~eI~~ia~~~-~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD  355 (375)
                      +|++++++.      +.+++.+ .++++||.+-+.   ++|.++|+++ ++||++|.+|+-... .+ +...+.....--
T Consensus       203 ~l~~~~~~~------~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~-~~-~~~~~~~~~~~v  274 (431)
T PRK15481        203 KLERALAQG------ARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSS-SP-YHSVIPQTTQRW  274 (431)
T ss_pred             HHHHHHhcC------CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhcc-CC-CCCCCcCCCCCE
Confidence            999998642      3355555 789999998665   5999999999 999999999986531 11 111111110112


Q ss_pred             EEEEcCcccCC
Q psy1596         356 SIAFNPSKWLM  366 (375)
Q Consensus       356 Si~~d~HK~l~  366 (375)
                      .+.-++.|.++
T Consensus       275 i~~~SfSK~~~  285 (431)
T PRK15481        275 ALIRSVSKALG  285 (431)
T ss_pred             EEEeeeccccC
Confidence            46678899887

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.05  E-value=4.2e-09  Score=105.44  Aligned_cols=144  Identities=15%  Similarity=-0.008  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++.  .                      ...+++++|+.++..++.+...                   ++.
T Consensus        54 ~~Le~~lA~l~--~----------------------~~~v~~~sG~~Ai~~~l~all~-------------------~Gd   90 (366)
T PRK07582         54 RALEAALGELE--G----------------------AEALVFPSGMAAITAVLRALLR-------------------PGD   90 (366)
T ss_pred             HHHHHHHHHHc--C----------------------CCEEEECCHHHHHHHHHHHhcC-------------------CCC
Confidence            66777788876  2                      1368889999888776654311                   345


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|+.....+.    ..|.+++.|+.++++.        .+.+.      +.+|+...+++++|.+.|+++|++
T Consensus        91 ~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~--------~~~~~------t~lV~le~p~NPtg~v~di~~I~~  156 (366)
T PRK07582         91 TVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE--------AALAG------ADLVLAETPSNPGLDVCDLAALAA  156 (366)
T ss_pred             EEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH--------HhccC------ceEEEEECCCCCCCCccCHHHHHH
Confidence            78888888877766542    2467888888754321        11111      336777889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                      +|+++|++++||++|+.+....|     +. + .+|.++.++|||+..|-|+
T Consensus       157 ~a~~~g~~lvVD~t~~~~~~~~p-----~~-~-g~Divv~S~sK~l~G~~g~  201 (366)
T PRK07582        157 AAHAAGALLVVDNTTATPLGQRP-----LE-L-GADLVVASDTKALTGHSDL  201 (366)
T ss_pred             HHHHcCCEEEEECCCCCccccCc-----hh-c-CCcEEEecccccccCCCCe
Confidence            99999999999999964322222     11 1 3699999999999887763

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.04  E-value=5e-09  Score=102.99  Aligned_cols=153  Identities=12%  Similarity=-0.011  Sum_probs=108.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++++++++|.+.                     ...++|+|+++++..+. .+..                   ++ 
T Consensus        50 ~~lr~~la~~~~~~~---------------------~~i~~t~G~~~~i~~~~-~~l~-------------------~g-   87 (330)
T TIGR01140        50 DELRAAAAAYYGLPA---------------------ASVLPVNGAQEAIYLLP-RLLA-------------------PG-   87 (330)
T ss_pred             HHHHHHHHHHhCCCh---------------------hhEEECCCHHHHHHHHH-HHhC-------------------CC-
Confidence            677888899888751                     34678888888766532 2221                   23 


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~i  320 (375)
                      .|++.+.+|.++...+...|.+++.++       |++.|++++++       +.+|+.+.+++++|.+-+   +++|+++
T Consensus        88 ~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~~-------~~~v~i~~p~NPtG~~~~~~~~~~l~~~  153 (330)
T TIGR01140        88 RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALEE-------LDVLVLCNPNNPTGRLIPPETLLALAAR  153 (330)
T ss_pred             eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhccc-------CCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence            477778899998888887888888887       88999888732       226777889999999866   7778889


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      |+++|+++++|.+|+.... .+.+..... ...-+.+..+++|+++.| ..+|.+
T Consensus       154 a~~~~~~ii~De~y~~~~~-~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i  206 (330)
T TIGR01140       154 LRARGGWLVVDEAFIDFTP-DASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFV  206 (330)
T ss_pred             hHhcCCEEEEECcccccCC-ccchhhHhc-cCCCEEEEEecchhhcCchhhhhhe
Confidence            9999999999999986642 111222111 112357788999998755 445554

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.03  E-value=4.7e-09  Score=116.35  Aligned_cols=157  Identities=11%  Similarity=0.020  Sum_probs=109.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|+.+.-.+...++++|+|++.                     ....++.++|.+.-.++++.+...             
T Consensus       117 QG~Leal~~~Qt~la~LtG~~~---------------------anaSl~d~aTAa~ea~~~a~~~~~-------------  162 (954)
T PRK05367        117 QGRLEALLNFQTMVADLTGLEI---------------------ANASLLDEATAAAEAMALAKRVSK-------------  162 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCh---------------------hhccccccHHHHHHHHHHhhhhcc-------------
Confidence            5565555788899999999983                     345788888877554433332210             


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                         .++..|++++..|.+....++    -.|.+++.+|.+++  ++        .+      ..+.++.+. .+.+|.+.
T Consensus       163 ---~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~~--------~~------~~~~vlvq~-p~~~G~i~  222 (954)
T PRK05367        163 ---SKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--LD--------HD------DVFGVLLQY-PGTSGEVR  222 (954)
T ss_pred             ---CCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--CC--------cc------cEEEEEEec-CCCCeeec
Confidence               012479999999999887652    35789999987542  11        11      134555555 57899999


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCccc-chhhhhhhcCCCcccEEEEcCcccCCCCCc-----ceeeC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKWLAGVEYANSIAFNPSKWLMVHFD-----CTAMW  375 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~~~gie~aDSi~~d~HK~l~~P~~-----~g~l~  375 (375)
                      |+++|+++|+++|+++.||+.+.+..++ .|.      .+ .||.++.++|||+ +|.+     +|+|+
T Consensus       223 d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pg------e~-GaDi~vgs~qkfg-~P~g~GGP~aGfla  283 (954)
T PRK05367        223 DYTALIAAAHARGALVAVAADLLALTLLTPPG------EM-GADIAVGSAQRFG-VPMGFGGPHAAYFA  283 (954)
T ss_pred             cHHHHHHHHHHcCCEEEEEehhhhccCCCChh------hc-CCCEEEeeCcccC-CCCCCCCCCEEEEE
Confidence            9999999999999999999976333322 221      11 4799999999996 7777     77654

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.03  E-value=1.1e-08  Score=102.60  Aligned_cols=163  Identities=12%  Similarity=0.021  Sum_probs=121.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      -+++.+.|..+|+.+                    ...--+++++||.+.=.++.....                   ++
T Consensus        40 ~~~~~~~L~~v~~t~--------------------~~~~~ll~gsGt~amEAav~sl~~-------------------pg   80 (383)
T COG0075          40 MKEVLEKLRKVFGTE--------------------NGDVVLLSGSGTLAMEAAVASLVE-------------------PG   80 (383)
T ss_pred             HHHHHHHHHHHhcCC--------------------CCcEEEEcCCcHHHHHHHHHhccC-------------------CC
Confidence            378889999999876                    223356778888776555544322                   33


Q ss_pred             eEEEecCCCchH--HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         243 LVAYCSDQAHSS--VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       243 ~vV~~S~~aH~S--v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      ..|++....-++  +.+-+...+.+++.|..+..-.+|+++++++|+++..    ...|.+++.-|+||...|+++|+++
T Consensus        81 dkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~  156 (383)
T COG0075          81 DKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKA  156 (383)
T ss_pred             CeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHH
Confidence            455555555444  3334556677888888876677999999999985432    3489999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |++||..++||+.=+.+..-.   +..-.|+   |.+....+|.+.+|.|.|++
T Consensus       157 ~k~~g~l~iVDaVsS~Gg~~~---~vd~wgi---Dv~itgSQK~l~~PPGla~v  204 (383)
T COG0075         157 AKEHGALLIVDAVSSLGGEPL---KVDEWGI---DVAITGSQKALGAPPGLAFV  204 (383)
T ss_pred             HHHcCCEEEEEecccCCCccc---chhhcCc---cEEEecCchhccCCCcccee
Confidence            999999999999777654322   2112354   99999999999999999876

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.03  E-value=5.6e-09  Score=105.72  Aligned_cols=144  Identities=9%  Similarity=0.089  Sum_probs=108.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +.+.+.++.+-|-+                       ..+++++|+.|+..++.+..+                   ++.
T Consensus        67 ~~Le~~la~le~~~-----------------------~~v~~sSG~aAi~~~l~all~-------------------~GD  104 (395)
T PRK05967         67 DALCKAIDALEGSA-----------------------GTILVPSGLAAVTVPFLGFLS-------------------PGD  104 (395)
T ss_pred             HHHHHHHHHHhCCC-----------------------CEEEECcHHHHHHHHHHHhcC-------------------CCC
Confidence            66777787764432                       368888899988877765422                   456


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+.+....+    ...|.++..++.+     +.++|+++|++.      +.+|+++.++|+++.+.||++|++
T Consensus       105 ~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-----~~e~l~~al~~~------TklV~lesPsNP~l~v~dl~~I~~  173 (395)
T PRK05967        105 HALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-----IGAGIAKLMRPN------TKVVHTEAPGSNTFEMQDIPAIAE  173 (395)
T ss_pred             EEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHH
Confidence            8999999998877543    3356777777543     457788888654      348999999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      +|+++|++++||++|+.+...-|    +..|   ||-+.-+..|++..
T Consensus       174 la~~~g~~vvVD~t~a~p~~~~p----l~~G---aDivv~S~tKy~~G  214 (395)
T PRK05967        174 AAHRHGAIVMMDNTWATPLYFRP----LDFG---VDISIHAATKYPSG  214 (395)
T ss_pred             HHHHhCCEEEEECCccCceecCh----hHcC---CCEEEEecccccCC
Confidence            99999999999999987654322    2234   69999999998543

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.02  E-value=4.2e-09  Score=108.60  Aligned_cols=172  Identities=12%  Similarity=-0.003  Sum_probs=122.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+++....|+..                   .+...++|+|+++|+.+.+.+..+               
T Consensus       132 ~G~~~LR~~ia~~l~~~~g~~~-------------------~~~~IiiT~G~q~al~l~~~~l~~---------------  177 (459)
T COG1167         132 AGLPELREAIAAYLLARRGISC-------------------EPEQIVITSGAQQALDLLLRLLLD---------------  177 (459)
T ss_pred             CCcHHHHHHHHHHHHHhcCCcc-------------------CcCeEEEeCCHHHHHHHHHHHhCC---------------
Confidence            5666677888888887788874                   344789999999987765544322               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---cc
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DN  313 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dp  313 (375)
                          +++.|++.+.+|+....+....|.+++.||+|++| ||+++|+++++...    +-++.+.-...++||.+   +.
T Consensus       178 ----pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G-~~~e~le~~~~~~~----~k~~y~~P~~qNPtG~tms~~r  248 (459)
T COG1167         178 ----PGDTVLVEDPTYPGALQALEALGARVIPVPVDEDG-IDPEALEEALAQWK----PKAVYVTPTFQNPTGVTMSLER  248 (459)
T ss_pred             ----CCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCC-CCHHHHHHHHhhcC----CcEEEECCCCCCCCCCccCHHH
Confidence                46789999999999999999999999999999777 99999999998752    11233333345677776   66


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCcccchh---hhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSSFICPE---FRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~---~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      -++|.++|++||+||+-|..|+-...-.+.   .+.+.. -++ =...-++.|.+..-.-+|.
T Consensus       249 R~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~-~~r-Viy~gSFSK~l~PglRlG~  309 (459)
T COG1167         249 RKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDA-PGR-VIYLGSFSKTLAPGLRLGY  309 (459)
T ss_pred             HHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCC-CCC-EEEEeeehhhcccccceee
Confidence            789999999999999999999886543111   111111 001 1244567787765555554

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.02  E-value=8.8e-09  Score=103.39  Aligned_cols=156  Identities=13%  Similarity=0.044  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++.+++.+|.+.                     ...++|+|+++++..++.+..+                   ++.
T Consensus        89 ~~lr~~ia~~~~~~~---------------------~~I~~t~Ga~~~i~~~~~~~~~-------------------~gd  128 (380)
T PLN03026         89 RRLRAALAEDSGLES---------------------ENILVGCGADELIDLLMRCVLD-------------------PGD  128 (380)
T ss_pred             HHHHHHHHHHhCcCh---------------------hhEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence            567788888888762                     3578999999998776654321                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++++.++..+...++..|.+++.+|.++++.+|+++|+++++..     .+.+|+.+.++++||.+-+.+++.++++.
T Consensus       129 ~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~  203 (380)
T PLN03026        129 KIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILEL  203 (380)
T ss_pred             EEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhc
Confidence            7888888887777777778889999999878899999999988422     13477778899999999999999999986


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      . +|+++|.||.-...- ......+..- .-..+.-++.|.++.
T Consensus       204 ~-~~vi~DeaY~~~~~~-~~~~~~~~~~-~~viv~~SfSK~~gl  244 (380)
T PLN03026        204 P-ILVVLDEAYIEFSTQ-ESRMKWVKKY-DNLIVLRTFSKRAGL  244 (380)
T ss_pred             C-CEEEEECcchhhcCC-cchHHHHHhC-CCEEEEecchHhhcC
Confidence            5 999999999654211 1111111111 113567788998763

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.01  E-value=5.2e-09  Score=104.63  Aligned_cols=156  Identities=11%  Similarity=0.010  Sum_probs=105.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+++.+++.+|.+.                     ...++|+|+++++..++.+...                   ++.
T Consensus        67 ~~Lr~aia~~~~~~~---------------------~~I~vt~Gs~e~i~~~~~~l~~-------------------~gd  106 (366)
T PRK01533         67 TTLRQTIANKLHVKM---------------------EQVLCGSGLDEVIQIISRAVLK-------------------AGD  106 (366)
T ss_pred             HHHHHHHHHHhCCCc---------------------ceEEECCCHHHHHHHHHHHhcC-------------------CCC
Confidence            456666777777762                     3588999999998777665422                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH---H
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP---I  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~---i  320 (375)
                      .|++++.++..+...+...|.+++.||.+ ++.+|+++|++++++.      +.+|+.+.++++||.+-+.+++.+   +
T Consensus       107 ~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~~~------~~~v~i~~P~NPTG~~~~~~~l~~l~~~  179 (366)
T PRK01533        107 NIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVDND------TKIVWICNPNNPTGTYVNDRKLTQFIEG  179 (366)
T ss_pred             EEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhCcC------CcEEEEeCCCCCCCCCcCHHHHHHHHHh
Confidence            78899999999999888888999999986 4569999999988643      236777789999999966555555   4


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCc--ccEEEEcCcccCCCC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEY--ANSIAFNPSKWLMVH  368 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~--aDSi~~d~HK~l~~P  368 (375)
                      |++++ ++++|.+|.....- ......+..++.  --.+.-++.|.++.|
T Consensus       180 ~~~~~-~~iiDe~y~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~~l~  227 (366)
T PRK01533        180 ISENT-LIVIDEAYYEYVTA-KDFPETLPLLEKHKNILVLRTFSKAYGLA  227 (366)
T ss_pred             CCCCC-EEEEEccHHHhhcc-ccCcchhHHhccCCCEEEEeCchHHhcCh
Confidence            55555 67789999743211 000001111111  124567888987644

>KOG0630|consensus

Probab=98.98  E-value=1.2e-09  Score=110.07  Aligned_cols=129  Identities=22%  Similarity=0.314  Sum_probs=102.2

Q ss_pred             CceEEEecCCCchHHHH-HHH-HcC--CeEEEEec-C---CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         241 SRLVAYCSDQAHSSVEK-AGL-IGL--VKMRYIES-D---DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~k-aa~-lg~--~~v~~Vp~-d---~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                      ..+++|+|+..|.-... +|+ +|-  ..+..++- |   -.|+||...+++.|++|..+|++|.++++..|++.+|.+|
T Consensus       230 aaPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD  309 (838)
T KOG0630|consen  230 AAPTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND  309 (838)
T ss_pred             cCceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence            46799999999976554 565 443  23444442 2   2469999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHhcC-CEEEEecccccCcccchhhhhhhc-CCCcccEEEEcCcccCCCCCc
Q psy1596         313 NLEELGPICEKEG-LWLHVDAAYAGSSFICPEFRKWLA-GVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       313 pl~eI~~ia~~~~-iwlHVDaA~gg~~~~~~~~~~~~~-gie~aDSi~~d~HK~l~~P~~  370 (375)
                      .|-.|.+||++++ +|+|.-| +|..++.|.+....+- -.+..||++++.--||++|--
T Consensus       310 mi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSa  368 (838)
T KOG0630|consen  310 MILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSA  368 (838)
T ss_pred             HHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCC
Confidence            9999999999997 9999988 6777777755222211 125679999999999999853

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=98.97  E-value=7.9e-10  Score=110.49  Aligned_cols=147  Identities=10%  Similarity=-0.082  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +++.+.+++++|.+                    +....+|+ +|||.++-.++......                  +.
T Consensus        44 ~~~r~~l~~l~~~~--------------------~~~~v~f~~gs~T~a~~~~~~~l~~~------------------~~   85 (361)
T TIGR01366        44 GRVREGLAELFSLP--------------------DGYEVILGNGGATAFWDAATFGLIEK------------------KS   85 (361)
T ss_pred             HHHHHHHHHHhCCC--------------------CCceEEEECCchhHHHHHHHHhcccc------------------cc
Confidence            78899999999987                    33457786 55999987777543210                  11


Q ss_pred             eEEEecCCCchHHHH-HHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         243 LVAYCSDQAHSSVEK-AGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~k-aa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      .++  +.-.|.+-.. .+.+   .+ +++.++.+....++.     .+.+      .+.+|++|+.+|.+|.+.|+++| 
T Consensus        86 l~i--~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~-----~~~~------~~~lV~~~h~et~tG~~~pi~~I-  150 (361)
T TIGR01366        86 LHL--SFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEP-----QADP------GVDVIAWAHNETSTGVAVPVRRP-  150 (361)
T ss_pred             cEE--ecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCC-----ccCC------CCCEEEEcccCCccceecccccc-
Confidence            233  3333432222 2222   23 567777654443433     1222      25589999999999999999998 


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                        ++++|+.++||++++.+....+-        +.+|.+++++|||++.|-|.++
T Consensus       151 --~~~~g~~~iVDavqs~g~~~idv--------~~~D~~~~s~~K~lg~~~Gl~~  195 (361)
T TIGR01366       151 --EGSDDALVVIDATSGAGGLPVDI--------AETDVYYFAPQKNFASDGGLWL  195 (361)
T ss_pred             --cccCCCeEEEEcCccccCCCCCH--------HHCCEEEEEchhhcCCCCceEE
Confidence              58899999999999998764431        1269999999999998866555

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=98.96  E-value=3.2e-08  Score=97.66  Aligned_cols=152  Identities=11%  Similarity=-0.004  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+++++++.+|++                     +...++|+|+++++...+.+.                     ++.
T Consensus        58 ~~lr~~ia~~~~~~---------------------~~~I~~t~G~~~~l~~~~~~~---------------------~gd   95 (337)
T PRK03967         58 DPLREAIAEFYGLD---------------------AENIAVGNGSDELISYLVKLF---------------------EGK   95 (337)
T ss_pred             HHHHHHHHHHhCcC---------------------cceEEEcCCHHHHHHHHHHHh---------------------CCC
Confidence            45666777777765                     245789999999875443221                     124


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++...+..+...+...|.+++.|+.++++.+|++.|++++.+       ..+++.+.++++||.+-+.++|.++++ 
T Consensus        96 ~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~-------~~~v~~~~P~NPtG~~~~~~~l~~i~~-  167 (337)
T PRK03967         96 HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKAKN-------ASAVFICSPNNPTGNLQPEEEILKVLE-  167 (337)
T ss_pred             eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHh-
Confidence            688889998877777778888999999988889999999886421       225667889999999999999999995 


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +++++++|.+|+...-  ..+.......++ =-+..++.|.++.|
T Consensus       168 ~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~l~S~SK~~~l~  209 (337)
T PRK03967        168 TGKPVVLDEAYAEFSG--KSLIGLIDEYPN-LILLRTFSKAFGLA  209 (337)
T ss_pred             cCCEEEEECchhhhcc--cchHHHHhhCCC-EEEEecchHhhcch
Confidence            7999999999986421  111111111111 13557899987744

>KOG0256|consensus

Probab=98.96  E-value=1e-08  Score=101.77  Aligned_cols=177  Identities=15%  Similarity=0.130  Sum_probs=137.2

Q ss_pred             hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      +.|...+++++.+.|.+.-|-+.         .|        ++...++|.|+|.+|-+.+.+..+              
T Consensus       120 y~Gl~~frqa~A~Fm~~~r~~~v---------~f--------dP~~~Vv~~G~T~ane~l~fcLad--------------  168 (471)
T KOG0256|consen  120 YHGLPSFRQAVAEFMERARGNRV---------KF--------DPERVVVTNGATSANETLMFCLAD--------------  168 (471)
T ss_pred             ccCchHHHHHHHHHHHHHhCCCC---------cc--------CccceEEecccchhhHHHHHHhcC--------------
Confidence            46777788899999999877763         33        566789999999998765554332              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-  311 (375)
                           |+...+++..-+..+.+-++ ..|+++++|.++  +++++++++||+++.+.++.|.+..-|+.|-++++.|.+ 
T Consensus       169 -----pgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~  243 (471)
T KOG0256|consen  169 -----PGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTL  243 (471)
T ss_pred             -----CCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCcc
Confidence                 45678888888888888775 578899888874  578999999999999999999999999999999999998 


Q ss_pred             --ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc---CCC-cccE--EEEcCcccCCCC
Q psy1596         312 --DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA---GVE-YANS--IAFNPSKWLMVH  368 (375)
Q Consensus       312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~---gie-~aDS--i~~d~HK~l~~P  368 (375)
                        +.+..+.+.+.++||.+++|..|++...-.++++..+.   ..+ .-|.  |.++..|=++.|
T Consensus       244 ~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~Glp  308 (471)
T KOG0256|consen  244 SPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLP  308 (471)
T ss_pred             CHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCC
Confidence              45777778889999999999999998754444432211   111 2233  678888888877

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=98.96  E-value=3.4e-09  Score=105.55  Aligned_cols=155  Identities=10%  Similarity=-0.098  Sum_probs=106.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC-hHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT-ASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG-GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ++-+++++.|+++||.|                    .....+|++| ||+|+-.++......       .         
T Consensus        37 ~~~~~~~~~l~~l~~~~--------------------~~~~v~~~~gsgT~a~ea~~~nl~~~-------~---------   80 (349)
T TIGR01364        37 AVANEAESDLRELLNIP--------------------DNYEVLFLQGGATGQFAAVPLNLLAE-------G---------   80 (349)
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCceEEEEcCCchHHHHHHHHhcCCC-------C---------
Confidence            33478899999999986                    2345677766 999877766543210       0         


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCC----CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKL----SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLE  315 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g----~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~  315 (375)
                      .+.+++..+...|....-+-+++.  +..+..++.+    ..|++.++.  .+      .+.+|..|...|.||...+  
T Consensus        81 ~~~l~i~~G~fg~r~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~--  148 (349)
T TIGR01364        81 KVADYIVTGAWSKKAAKEAKKYGV--VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR--  148 (349)
T ss_pred             CeEEEEECCHHHHHHHHHHHHhCC--cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc--
Confidence            123466677777777555555654  5556654333    345554441  11      2558999999999999865  


Q ss_pred             HHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                         ++++.+++.++||++.+.+....+ .+       ..|.+++++||+++ |.|.|++|
T Consensus       149 ---~l~~~~~~l~iVDavss~g~~~id-~~-------~~d~~~~ssqK~lg-P~Glg~l~  196 (349)
T TIGR01364       149 ---ELPDVKNAPLVADMSSNILSRPID-VS-------KFGLIYAGAQKNIG-PAGLTVVI  196 (349)
T ss_pred             ---eecccCCCeEEEEccccccCccCC-HH-------HccEEEEecccccC-CCceEEEE
Confidence               667778999999999999876432 11       23799999999986 99999875

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=98.95  E-value=2.1e-09  Score=107.44  Aligned_cols=157  Identities=11%  Similarity=-0.075  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ++-+++.+.|+++||.|                    .....+|++|++.+.+.|...-.-.      .+         .
T Consensus        48 ~~~~~~~~~l~~l~~~~--------------------~~~~v~~~~gsgt~~~Ea~~~nl~~------~g---------~   92 (360)
T PRK05355         48 AVAEEAEADLRELLNIP--------------------DNYKVLFLQGGASLQFAMVPMNLLG------GG---------K   92 (360)
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCcEEEEEcCCchHHHHHHHHhcCC------CC---------C
Confidence            34478999999999986                    2345677766666655554332110      00         1


Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHH-HHHHhhhcCCccEEEEEEcCCCCccccc-cHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIE-AIERDKKKHLIPFFVCGTLGTTGACAFD-NLEEL  317 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~-aI~~~~~~g~~p~~Vv~t~GtT~tGavD-pl~eI  317 (375)
                      +.+++..+...|.+.+-+-+++. . ..++.+. .+..+..++++ +|+++      +.+|..|...|.||... ||++|
T Consensus        93 ~~l~i~~G~fg~r~~~~a~~~g~-~-~~~~~~~~~g~~~~~~~~~~~l~~~------~~~V~~th~eTstGv~~~~i~~i  164 (360)
T PRK05355         93 KADYVDTGSWSKKAIKEAKKYGE-V-NVAASSEDDGFTYIPPLDEWQLSDD------AAYVHYTSNETIDGTEFHELPDT  164 (360)
T ss_pred             eEEEEECCHHHHHHHHHHHHhCC-c-eEEecccccCCCCCCChhhccCCCC------CCEEEEccCCCcceEecCccccc
Confidence            23567778888888665556663 3 5555543 56666666666 56432      45899999999999996 78777


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                            +|+.++||++.+.+....+-     +   ..|.++++.||+++ |.|.|++|
T Consensus       165 ------~g~l~vVDavss~g~~~idv-----~---~~d~~~~ssqK~lg-P~Glg~l~  207 (360)
T PRK05355        165 ------GDVPLVADMSSDILSRPIDV-----S---KFGLIYAGAQKNIG-PAGLTIVI  207 (360)
T ss_pred             ------CCCcEEEEcCccccCccCCH-----H---HccEEEEecccccc-CCceEEEE
Confidence                  89999999999998764321     1   23799999999876 99999885

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.95  E-value=3.7e-09  Score=105.37  Aligned_cols=168  Identities=18%  Similarity=0.095  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChH-HHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTAS-ESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT-~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++..+-+.+|++                    +....++++.+| ++..+++.+.|.+  +               ..
T Consensus        59 n~l~~d~~~~~G~~--------------------~~~~~~~vP~atgm~l~l~l~~l~~r--~---------------~a  101 (389)
T PF05889_consen   59 NSLVLDALRLAGLR--------------------SVKSCFVVPMATGMSLTLCLLALRMR--P---------------KA  101 (389)
T ss_dssp             HHHHHHHHHHTTHT--------------------THCEEEEESS-HHHHHHHHHHHHHHH--C---------------T-
T ss_pred             HHHHHHHHHHcCCc--------------------cccceEEEecccccHHHHHHHHHhcc--c---------------CC
Confidence            55555566668887                    334567788887 5666777777622  1               12


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-ccHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DNLEELG  318 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dpl~eI~  318 (375)
                      ..|+.+...|+|-.||+...|.+++.||.   .+.-..|.+++|++|++.   |..+.+++.|.-+-..+-. |++.+|+
T Consensus       102 ~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~Ia  178 (389)
T PF05889_consen  102 KYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIA  178 (389)
T ss_dssp             -EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHH
T ss_pred             ceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHH
Confidence            36889999999999999999999999985   344567789999999654   3346778888766667766 6699999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhc---CCCcccEEEEcCcccCCCCCcceee
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLA---GVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~---gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +||++||++..|.+|||.-.-.   +.+++.   -..+.|.+.-+.-|-+.+|.|-+++
T Consensus       179 kiC~~~~IPhlvNnAYgvQ~~~---~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~  234 (389)
T PF05889_consen  179 KICKEYDIPHLVNNAYGVQSSK---CMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIM  234 (389)
T ss_dssp             HHHHHHT--EEEEGTTTTT-HH---HHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEE
T ss_pred             HHHHHcCCceEEccchhhhHHH---HHHHHHHHHhcCCcceeeeecCCCEEecCCCcEE
Confidence            9999999999999999995321   111111   1236788888888888888776553

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=98.95  E-value=1.2e-08  Score=101.13  Aligned_cols=153  Identities=12%  Similarity=-0.016  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc-
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR-  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~-  242 (375)
                      .++.+.+++.+|.+.                     ...++|+|+++++..++.+...                   ++ 
T Consensus        63 ~~Lr~aia~~~~~~~---------------------~~I~it~Gs~~~i~~~~~~~~~-------------------~g~  102 (354)
T PRK04635         63 PELINAYSAYAGVAP---------------------EQILTSRGADEAIELLIRAFCE-------------------PGQ  102 (354)
T ss_pred             HHHHHHHHHHhCcCH---------------------HHEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence            566777778788762                     3589999999998777654321                   22 


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      ..|++.+.++..+...++..|.+++.||.++++.+|++.+++ + .      .+.+|+.+.++++||.+-+.+++.++++
T Consensus       103 d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~  174 (354)
T PRK04635        103 DSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIE  174 (354)
T ss_pred             CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHH
Confidence            468888898888888788888899999998788999998873 3 1      1347778899999999999999999887


Q ss_pred             hc-CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         323 KE-GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       323 ~~-~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      .. ++++++|+||.-.... ..........+.. .+.-+++|+++
T Consensus       175 ~~~~~~vivDeay~~~~~~-~s~~~~~~~~~~~-iv~~S~SK~~~  217 (354)
T PRK04635        175 MTPDAIVVVDEAYIEFCPE-YSVADLLASYPNL-VVLRTLSKAFA  217 (354)
T ss_pred             hCCCcEEEEeCchHhhccC-cchHHHHhhCCCE-EEEechHHHhh
Confidence            63 6999999999764311 0111111111111 35678999876

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=98.95  E-value=2.6e-08  Score=100.26  Aligned_cols=159  Identities=13%  Similarity=0.082  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|++++|.+                       ..+|+++||+||..|+.++|.....+ + +.+.      .+..
T Consensus        86 ~~l~~~l~~~~~~~-----------------------~~~~~~SGs~A~e~al~~a~~~~~~~-~-g~~~------~~~~  134 (401)
T PRK00854         86 APLYEELAALTGSH-----------------------KVLPMNSGAEAVETAIKAVRKWGYEV-K-GVPE------GQAE  134 (401)
T ss_pred             HHHHHHHHhhCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHHHHhc-c-CCCC------CCce
Confidence            67778888887654                       47999999999999999998642110 0 0000      0123


Q ss_pred             EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                      +|..+..-|-+..-+..+++            ..++.+|.     .|+++|+++|.+.      +.+|+.....+++|.+
T Consensus       135 vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~------~~aii~e~~~~~~G~~  203 (401)
T PRK00854        135 IIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAITPN------TVAFLVEPIQGEAGVI  203 (401)
T ss_pred             EEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCC------eEEEEEccccCCCCCc
Confidence            56666666776554443321            12334442     4889999988642      4478888888999998


Q ss_pred             cc----HHHHHHHHHhcCCEEEEecccccCcccchh-hhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPE-FRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~-~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      -|    +++|+++|++||+++++|++|.+... .+. +.....++ .+|.++++  |++..-
T Consensus       204 ~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg  261 (401)
T PRK00854        204 IPPAGYFTRVRELCTANNVTLILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGG  261 (401)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCC
Confidence            65    99999999999999999999985322 221 11112343 35877775  887644

>PLN02672 methionine S-methyltransferase

Probab=98.94  E-value=2.4e-08  Score=111.24  Aligned_cols=134  Identities=19%  Similarity=0.241  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ++...+.+|+++..|++.                   ++ ...++|+|+++++..++.+..+                  
T Consensus       734 dlr~aLa~~la~~~Gv~~-------------------d~~e~IIvt~Gs~elL~lll~aLl~------------------  776 (1082)
T PLN02672        734 DPRPSILQFIKSNYGFPT-------------------DSCTEFVYGDTSLALFNKLVLCCVQ------------------  776 (1082)
T ss_pred             HHHHHHHHHHHHHhCcCC-------------------CCCCEEEEeCCHHHHHHHHHHHHcC------------------
Confidence            345899999999999983                   22 2456666655555455443322                  


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC-CCcccc---cc
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT-TGACAF---DN  313 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt-T~tGav---Dp  313 (375)
                       ++..|++...++..+..++.+.|.+++.||++  +++.+|.+.|++++++...    + +|+.+.++ |+||.+   +.
T Consensus       777 -pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~----~-~I~L~nPnhNPTG~v~S~ee  850 (1082)
T PLN02672        777 -EGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKK----P-WVYISGPTINPTGLLYSNSE  850 (1082)
T ss_pred             -CCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC----C-EEEEECcCCCCcCccCCHHH
Confidence             34578899999999999999889999999986  3688999999999854211    2 57777776 999998   67


Q ss_pred             HHHHHHHHHhcCCEEEEecccccC
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      +++|+++|++||++|++|.+|+..
T Consensus       851 Le~Llela~k~di~VIsDEaYsdL  874 (1082)
T PLN02672        851 IEEILSVCAKYGARVIIDTSFSGL  874 (1082)
T ss_pred             HHHHHHHHHHcCCEEEEeCCCCcc
Confidence            889999999999999999999854

>PRK05839 hypothetical protein; Provisional

Probab=98.94  E-value=1e-08  Score=102.60  Aligned_cols=135  Identities=10%  Similarity=-0.004  Sum_probs=100.1

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |...+++.+.+|+++..|.+.                   ++...++|+|++++....+.+....               
T Consensus        61 G~~~lr~aia~~l~~~~g~~~-------------------~~~~I~it~G~~~al~~~~~~~~~~---------------  106 (374)
T PRK05839         61 GEESLREAQRGFFKRRFKIEL-------------------KENELIPTFGTREVLFNFPQFVLFD---------------  106 (374)
T ss_pred             CCHHHHHHHHHHHHHHhCCCC-------------------CcceEEEecCcHHHHHHHHHHHhcC---------------
Confidence            455677888899999888763                   3456888999998876655443210               


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                        .++..|+++..++..+...+...|.+++.||.+++  +.+|.++.  .++ .      +.+|+.+.++|+||.+   +
T Consensus       107 --~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~~-~------~k~v~i~nP~NPTG~~~s~~  175 (374)
T PRK05839        107 --KQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--ELQ-E------VDLVILNSPNNPTGRTLSLE  175 (374)
T ss_pred             --CCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hhc-c------ccEEEEeCCCCCcCcccCHH
Confidence              02357889999999999998888899999998643  55554433  221 1      3366777899999987   6


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      .+++|+++|+++|+||++|.+|+-.
T Consensus       176 ~l~~i~~~~~~~~~~ii~DE~Y~~~  200 (374)
T PRK05839        176 ELIEWVKLALKHDFILINDECYSEI  200 (374)
T ss_pred             HHHHHHHHHHHcCCEEEeccchhhc
Confidence            6888889999999999999999864

>PRK07908 hypothetical protein; Provisional

Probab=98.94  E-value=3e-08  Score=97.96  Aligned_cols=154  Identities=16%  Similarity=0.081  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+++++++.+|.+.                     ...++|+|+++++..++. . .                   ++ 
T Consensus        61 ~~lr~aia~~~~~~~---------------------~~I~it~Ga~~al~~~~~-l-~-------------------~~-   97 (349)
T PRK07908         61 RRARAAVAARHGRTP---------------------DEVLLLAGAAEGFALLAR-L-R-------------------PR-   97 (349)
T ss_pred             HHHHHHHHHHhCcCh---------------------hhEEECCCHHHHHHHHHh-c-C-------------------CC-
Confidence            566777777778762                     358999999999876554 1 1                   12 


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .+++...+.......++..|.+++.+|.++++.+|+++++    +.      +.+++.+.++++||.+-+.++|.++|++
T Consensus        98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l~----~~------~~~i~l~np~NPTG~~~~~~~l~~l~~~  167 (349)
T PRK07908         98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAVP----DD------ADLVVIGNPTNPTSVLHPAEQLLALRRP  167 (349)
T ss_pred             eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHhc----cC------CCEEEEcCCCCCCCCCcCHHHHHHHHhc
Confidence            2344567776667777778889999999877889998653    11      3367778899999999999999999975


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEE-cCcccCC-CCCcceee
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF-NPSKWLM-VHFDCTAM  374 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~-d~HK~l~-~P~~~g~l  374 (375)
                       +.++++|++|+-... . .. ..+.....-+.+.+ +++|.++ ...-+|.+
T Consensus       168 -~~~iIvDe~y~~~~~-~-~~-~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~  216 (349)
T PRK07908        168 -GRILVVDEAFADAVP-G-EP-ESLAGDDLPGVLVLRSLTKTWSLAGLRVGYA  216 (349)
T ss_pred             -CCEEEEECcchhhcc-C-Cc-cccccccCCCEEEEeecccccCCccceeeee
Confidence             889999999975321 1 10 01111222356777 8999775 33445654

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=98.93  E-value=3.1e-08  Score=103.54  Aligned_cols=145  Identities=10%  Similarity=0.066  Sum_probs=101.1

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHc--CCeEEEEecCC--C--
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG--LVKMRYIESDD--K--  274 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg--~~~v~~Vp~d~--~--  274 (375)
                      ..++|+||++++..++.+.....+              +.+++.|++....+..+...+.+.  +.+++.|+.++  +  
T Consensus       157 ~V~it~Gat~al~~~~~~l~~~~l--------------l~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g  222 (521)
T TIGR03801       157 DLFAVEGGTAAMCYIFDSLKANEL--------------LKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDG  222 (521)
T ss_pred             eEEEeCCHHHHHHHHHHHHhHhhc--------------CCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccc
Confidence            688999999998887765322111              124568999999999988887764  56777887742  2  


Q ss_pred             ---CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhc--CCEEEEecccccCcccchhhhh
Q psy1596         275 ---LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKE--GLWLHVDAAYAGSSFICPEFRK  346 (375)
Q Consensus       275 ---g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~--~iwlHVDaA~gg~~~~~~~~~~  346 (375)
                         +++|.++|++++++.      +.+|+++.++|+||.+   +.+++|+++|+++  ++||++|.+|+-...   .+..
T Consensus       223 ~~~~~~d~~~l~~~~~~~------~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s  293 (521)
T TIGR03801       223 THTWQYPDKELEKLRDPS------IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRS  293 (521)
T ss_pred             cccCCCCHHHHHHhcCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccc
Confidence               789999999876543      3377777899999998   4588889999987  999999999986431   1111


Q ss_pred             hhcCCCcccEEEEcCcccCCCC
Q psy1596         347 WLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       347 ~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ...-...--.+.-++.|.+++|
T Consensus       294 l~~~~~~~vI~v~SfSK~fg~~  315 (521)
T TIGR03801       294 LFAELPYNTIGVYSFSKYFGAT  315 (521)
T ss_pred             hhhhCCCCEEEEEcchhhccCc
Confidence            1111111124556888977543

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK08637 hypothetical protein; Provisional

Probab=98.92  E-value=5.4e-08  Score=97.76  Aligned_cols=143  Identities=10%  Similarity=-0.043  Sum_probs=101.0

Q ss_pred             cchhHHHHHHHHHHHHHcC-CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENA-TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG-~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++.+.+++.+.-+ +..        +          +....++|+|+++++.+.+.+..+              
T Consensus        44 ~G~~~lr~~ia~~~~~~~~~~~~--------~----------~~~~I~it~G~~~al~~~~~~l~~--------------   91 (388)
T PRK08637         44 QGIPELRDLWQEKMLRENPSLSG--------K----------KMSLPIVTNALTHGLSLVADLFVD--------------   91 (388)
T ss_pred             CCCHHHHHHHHHHHhccCccccc--------c----------ccceeeEccchHHHHHHHHHHhcC--------------
Confidence            4566666666667665432 110        0          113468899999988776654322              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHH-HHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAG-LIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa-~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                           ++..|++...++..+...+ ...|.+++.||.+ +++.+|+++|+++++.....  ...+++.+.++++||.+  
T Consensus        92 -----~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~--~~~~~~~~~P~NPTG~~~s  164 (388)
T PRK08637         92 -----QGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNK--GKVIVILNFPNNPTGYTPT  164 (388)
T ss_pred             -----CCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccC--CCEEEEEeCCCCCCCCCCC
Confidence                 3457899999998888875 4678899999983 55679999999998721111  13456667789999987  


Q ss_pred             -ccHHHHHHHHHh-----cCCEEEEecccccCc
Q psy1596         312 -DNLEELGPICEK-----EGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 -Dpl~eI~~ia~~-----~~iwlHVDaA~gg~~  338 (375)
                       +.+++|+++|++     +++||++|.+|....
T Consensus       165 ~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~  197 (388)
T PRK08637        165 EKEATAIVEAIKELADAGTKVVAVVDDAYFGLF  197 (388)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEecccchhcc
Confidence             668888888775     899999999998653

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=98.92  E-value=7.6e-08  Score=95.59  Aligned_cols=138  Identities=14%  Similarity=0.105  Sum_probs=95.0

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCc
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSL  277 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~m  277 (375)
                      ...++|+|+++++..++.+. .                   + ..|++.+.++..+...+...|.+++.+|.++  ++.+
T Consensus        72 ~~i~it~Ga~~~l~~~~~~~-~-------------------~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  130 (354)
T PRK06358         72 ENVILGNGATELIFNIVKVT-K-------------------P-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAA  130 (354)
T ss_pred             hhEEECCCHHHHHHHHHHHh-C-------------------C-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCc
Confidence            45899999999987666532 1                   1 2477888888888888888888999999864  3578


Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA  354 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a  354 (375)
                      | +++.+.+.+.      +.+|+.+.++++||.+-   .+.+|+++|+++++|+++|.+|.-...- +.....+..+...
T Consensus       131 d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~-~~~~~~~~~~~~~  202 (354)
T PRK06358        131 N-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEE-NETISMINYLENF  202 (354)
T ss_pred             c-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCC-ccchhHHHhccCC
Confidence            8 5555555321      34677788999999884   5889999999999999999999765421 1100111111111


Q ss_pred             c--EEEEcCcccCC
Q psy1596         355 N--SIAFNPSKWLM  366 (375)
Q Consensus       355 D--Si~~d~HK~l~  366 (375)
                      +  -+.-++.|.++
T Consensus       203 ~~vi~~~S~SK~~g  216 (354)
T PRK06358        203 KNLIIIRAFTKFFA  216 (354)
T ss_pred             CCEEEEEechhhcc
Confidence            1  34568889876

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=98.90  E-value=4.3e-08  Score=98.80  Aligned_cols=165  Identities=16%  Similarity=0.079  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|+++.+.+                       ..+|+++||+||..|+.++|.......+. ..       .++.
T Consensus        85 ~~l~~~l~~~~~~~-----------------------~~~~~~SGseA~e~Alk~a~~~~~~~~g~-~~-------~r~~  133 (396)
T PRK04073         85 GPWYEKVAKLTGKD-----------------------MVLPMNTGAEAVETAIKAARRWAYDVKGV-EP-------NKAE  133 (396)
T ss_pred             HHHHHHHHhcCCCC-----------------------eEEEcCChHHHHHHHHHHHHHHhhhccCC-CC-------CCCE
Confidence            56777787776543                       46899999999999999998752110000 00       0123


Q ss_pred             EEEecCCCchHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                      +|.+...-|-+..-++.+.+..            +..+|.+     |+++|++++++.      +.+|+++...+++|.+
T Consensus       134 ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~~~------~~~viiep~~~~~G~~  202 (396)
T PRK04073        134 IIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAAITPN------TAAFLVEPIQGEAGIN  202 (396)
T ss_pred             EEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC-----CHHHHHHhcccC------eEEEEEcCccCCCCCc
Confidence            5555566776666665543311            2333322     789999888532      4477788787889987


Q ss_pred             cc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596         312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                      -|    +++|.++|++||+++++|++|.+....-..+.....++ ..|.+++  .|.++.+ +..|.
T Consensus       203 ~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~  266 (396)
T PRK04073        203 IPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISC  266 (396)
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceE
Confidence            44    89999999999999999999987432111111112233 3687776  5987765 44444

>PRK09275 aspartate aminotransferase; Provisional

Probab=98.89  E-value=4.1e-08  Score=102.72  Aligned_cols=145  Identities=10%  Similarity=0.088  Sum_probs=99.8

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC--CeEEEEecC--CCCC
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL--VKMRYIESD--DKLS  276 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~--~~v~~Vp~d--~~g~  276 (375)
                      ..++|+||++++..++.+.....+              +.+++.|++....+..+...+.+.+  .+++.++.+  +++.
T Consensus       163 ~I~vT~Ga~~al~~~~~aL~~~~l--------------l~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~  228 (527)
T PRK09275        163 DLFAVEGGTAAMCYIFDSLKENGL--------------LKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQ  228 (527)
T ss_pred             eEEEeCCHHHHHHHHHHHHhhhhc--------------CCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCC
Confidence            689999999998888775332111              1245689999999999988887754  455666654  4588


Q ss_pred             cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHh--cCCEEEEecccccCcccchhhhhhhcCC
Q psy1596         277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEK--EGLWLHVDAAYAGSSFICPEFRKWLAGV  351 (375)
Q Consensus       277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~--~~iwlHVDaA~gg~~~~~~~~~~~~~gi  351 (375)
                      +|+++|++++++.      +.+|+++.++|+||.+   +.+++|+++|++  +++||++|.+|+-...   .+.....-+
T Consensus       229 ~d~~~l~~~~~~~------tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~  299 (527)
T PRK09275        229 YPDSELEKLRDPS------IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVL  299 (527)
T ss_pred             CCHHHHHhhcCCC------CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhC
Confidence            9999999977543      3477788899999998   458888999965  5999999999987531   111111111


Q ss_pred             CcccEEEEcCcccCCCC
Q psy1596         352 EYANSIAFNPSKWLMVH  368 (375)
Q Consensus       352 e~aDSi~~d~HK~l~~P  368 (375)
                      ..--.+.-++.|.+++|
T Consensus       300 ~~~~I~v~SfSK~f~mt  316 (527)
T PRK09275        300 PYNTILVYSFSKYFGAT  316 (527)
T ss_pred             CCCEEEEeehhhhccCc
Confidence            11123455778876543

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=98.89  E-value=8.1e-08  Score=96.46  Aligned_cols=167  Identities=13%  Similarity=0.047  Sum_probs=107.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.+++++|.+                       ..+|+++||+||..|+..+|.....+.+.  +      ..+..
T Consensus        76 ~~~~~~l~~~~~~~-----------------------~~~~~~SGs~A~e~al~~~~~~~~~~~~~--~------~~~~~  124 (400)
T PTZ00125         76 GLAEKYITDLFGYD-----------------------KVLPMNSGAEAGETALKFARKWGYEVKGI--P------ENQAK  124 (400)
T ss_pred             HHHHHHHHhCCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHHHHhccCC--C------CCCCe
Confidence            66777777776654                       36899999999999999998642111000  0      00233


Q ss_pred             EEEecCCCchHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                      ++.....-|-+...++.+.+..            +..++.     .|+++|+++++..     .+.+|++.-..+++|.+
T Consensus       125 vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~-----~~~~v~~ep~~~~~G~~  194 (400)
T PTZ00125        125 IIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY-----NDVEALEKLLQDP-----NVAAFIVEPIQGEAGVI  194 (400)
T ss_pred             EEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC-----CCHHHHHHHhCCC-----CeEEEEEcCccCCCCCc
Confidence            5666666777776666543321            122222     3899999998621     24466666667788987


Q ss_pred             cc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC-cceee
Q psy1596         312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF-DCTAM  374 (375)
Q Consensus       312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~-~~g~l  374 (375)
                      -+    +++|.++|++||+++++|++|.+.......+.....++ ..|.++++  |++..++ ..|++
T Consensus       195 ~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v  259 (400)
T PTZ00125        195 VPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAV  259 (400)
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEE
Confidence            66    99999999999999999999975322111111112344 35888775  9988665 56644

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=98.88  E-value=1.1e-07  Score=95.89  Aligned_cols=164  Identities=13%  Similarity=0.023  Sum_probs=104.8

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+.|++++|.+                       ..+|+++|++||..|+..+|.....+.+.         ...
T Consensus        80 ~~~~l~~~l~~~~~~~-----------------------~~~~~~SGs~A~e~ai~~a~~~~~~~~~~---------~~~  127 (401)
T TIGR01885        80 VFGEFAEYVTKLFGYD-----------------------KVLPMNTGAEAVETAIKLARKWGYKVKGI---------PEN  127 (401)
T ss_pred             HHHHHHHHHHhhcCCC-----------------------EEEEeCccHHHHHHHHHHHHHHhhhhcCC---------CCC
Confidence            3477888888888765                       36899999999999999998753211000         012


Q ss_pred             ceEEEecCCC-chHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596         242 RLVAYCSDQA-HSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA  308 (375)
Q Consensus       242 ~~vV~~S~~a-H~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t  308 (375)
                      +.+|++.+.+ |-+..-++.+.+.            .+..+|.+     |+++|+++|++..   ....+|+.....+++
T Consensus       128 ~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~avi~E~v~~~~  199 (401)
T TIGR01885       128 QAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDHG---PNVCAFIVEPIQGEA  199 (401)
T ss_pred             CCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHHhcC---CCEEEEEEeCccCCC
Confidence            3466666666 5565666555321            23344432     7899999996531   223455555455567


Q ss_pred             ccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         309 CAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       309 GavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      |.+-+    +++|.++|++||+++++|++|.+.......+.....++ ..|.++++  |.+...
T Consensus       200 G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g  260 (401)
T TIGR01885       200 GVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGG  260 (401)
T ss_pred             CCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCC
Confidence            88765    99999999999999999999865322111111112233 46888875  987643

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=98.88  E-value=3.2e-08  Score=98.22  Aligned_cols=128  Identities=11%  Similarity=0.048  Sum_probs=94.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++++.+|+.+..|.+ .                   ++...++|+|++++...++.+..-              
T Consensus        56 ~G~~~lr~~ia~~~~~~~~~~~~-------------------~~~~I~it~G~~~~i~~~~~~l~~--------------  102 (357)
T TIGR03539        56 WGTPELREAIVDWLERRRGVPGL-------------------DPTAVLPVIGTKELVAWLPTLLGL--------------  102 (357)
T ss_pred             cCCHHHHHHHHHHHHHhcCCCCC-------------------CcCeEEEccChHHHHHHHHHHHcC--------------
Confidence            466777789999999888875 3                   345688899999987665443210              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                          .++..|++++.+|.++..++...|.+++.++       |++.|+.    .     .+.+|+.+.++++||.+   +
T Consensus       103 ----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l~~----~-----~~~~v~~~~p~NPtG~~~~~~  162 (357)
T TIGR03539       103 ----GPGDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTELDP----V-----GPDLIWLNSPGNPTGRVLSVD  162 (357)
T ss_pred             ----CCCCEEEECCCCcHHHHHHHHhcCCEEeccC-------ChhhcCc----c-----CccEEEEeCCCCCcCccCCHH
Confidence                1345788999999999888877777776663       2333321    1     24467777899999986   4


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      .+++|+++|+++|+|+++|.+|+..
T Consensus       163 ~~~~i~~~a~~~~~~ii~De~y~~~  187 (357)
T TIGR03539       163 ELRAIVAWARERGAVVASDECYLEL  187 (357)
T ss_pred             HHHHHHHHHHHcCeEEEEecchhhh
Confidence            6888999999999999999999753

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK06434 cystathionine gamma-lyase; Validated

Probab=98.88  E-value=4e-08  Score=99.22  Aligned_cols=148  Identities=13%  Similarity=0.084  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++.|.+                       ..+.+++|+.|+.+++.+...                   ++.
T Consensus        67 ~~lE~~la~leg~~-----------------------~av~~sSG~aAi~~al~all~-------------------~GD  104 (384)
T PRK06434         67 QAFEEKYAVLENAE-----------------------HALSFSSGMGAITSAILSLIK-------------------KGK  104 (384)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence            66777788888765                       368999999998888865421                   345


Q ss_pred             EEEecCCCchHHH----HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVE----KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~----kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...+....    ..+...|.+++.+++++...++       ++.+     .+.+|+....++.++.+.||++|++
T Consensus       105 ~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~-------l~~~-----~tklv~~e~~snpt~~v~Di~~I~~  172 (384)
T PRK06434        105 RILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD-------FDPS-----NYDLIYAESITNPTLKVPDIKNVSS  172 (384)
T ss_pred             EEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee-------ecCC-----CeeEEEEEcCCCCCceeecHHHHHH
Confidence            6777765322222    3334467888888876422222       1111     1447888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|++++  +.||++++.....-|     + + ..+|.+++|+||++..+-+  .|++
T Consensus       173 la~~~~--lvVD~t~~s~~~~~p-----l-~-~gaDivv~S~tK~i~G~~d~~gG~v  220 (384)
T PRK06434        173 FCHEND--VIVDATFASPYNQNP-----L-D-LGADVVIHSATKYISGHSDVVMGVA  220 (384)
T ss_pred             HHHHcC--eEEECCCCCcccCCc-----h-h-cCCCEEEeecccccCCCCCceEEEE
Confidence            999998  567999976533211     1 1 1479999999999988776  5554

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=98.87  E-value=6.6e-08  Score=96.69  Aligned_cols=169  Identities=15%  Similarity=0.040  Sum_probs=111.5

Q ss_pred             chhHHHHHHHHHHHHHcC--CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         158 DRDKYSSKVLDFVSKENA--TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG--~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      |...+++.+.+|+.+..|  ++.                   ++...++|+|+++++..++.+....             
T Consensus        67 G~~~Lr~aia~~~~~~~~~~~~v-------------------~~~~I~it~Ga~~al~~~~~~~~~~-------------  114 (374)
T PRK02610         67 GHEALKQAIAEYVNESAAGSSQI-------------------TPANISVGNGSDELIRSLLIATCLG-------------  114 (374)
T ss_pred             chHHHHHHHHHHhCccccccCCC-------------------CHHHEEEcCChHHHHHHHHHHHcCC-------------
Confidence            556666777777776542  332                   3345889999999876655443210             


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                           ++..|++.+.++..+...++..|.+++.++.++ ++.+|+++|++++++...  ..+.+|+.+.++++||.+-+.
T Consensus       115 -----g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~--~~~k~i~l~~P~NPTG~~~s~  187 (374)
T PRK02610        115 -----GEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQN--PPVRVVFVVHPNSPTGNPLTA  187 (374)
T ss_pred             -----CCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcC--CCceEEEEeCCCCCCCCCCCH
Confidence                 112688899999999988888899999999865 478999999999865211  124577777899999999665


Q ss_pred             HHHHHHHH-hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         315 EELGPICE-KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       315 ~eI~~ia~-~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +++..+.+ .+++||++|.+|.-..... .... +..... =-+.-++.|.++.|
T Consensus       188 ~~l~~l~~~~~~~~iI~De~Y~~~~~~~-~~~~-~~~~~~-~ivi~SfSK~~g~~  239 (374)
T PRK02610        188 AELEWLRSLPEDILVVIDEAYFEFSQTT-LVGE-LAQHPN-WVILRTFSKAFRLA  239 (374)
T ss_pred             HHHHHHHhccCCcEEEEeccccccCccc-hHHH-HhcCCC-EEEEEecchhccCc
Confidence            55555442 1489999999997643211 1111 111111 13567889988544

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=98.86  E-value=3.8e-08  Score=97.82  Aligned_cols=159  Identities=9%  Similarity=0.021  Sum_probs=106.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++.+.+|+.+..|.+ .                   ++...++|+|+++++..++.+..-              
T Consensus        62 ~G~~~lr~~ia~~l~~~~~~~~~-------------------~~~~I~it~G~~~~i~~~~~~l~~--------------  108 (364)
T PRK07865         62 AGTPELREAIVGWLARRRGVTGL-------------------DPAAVLPVIGSKELVAWLPTLLGL--------------  108 (364)
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCC-------------------CcccEEEccChHHHHHHHHHHHcC--------------
Confidence            456677789999999888875 3                   345688999999987664443210              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                          .++..|++++.+|.++..++...|.+++.++       +.+++++         ..+.+|+.+.++++||.+   +
T Consensus       109 ----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-------~~~~l~~---------~~~~~v~~~~p~NPtG~~~~~~  168 (364)
T PRK07865        109 ----GPGDVVVIPELAYPTYEVGARLAGATVVRAD-------SLTELGP---------QRPALIWLNSPSNPTGRVLGVD  168 (364)
T ss_pred             ----CCCCEEEECCCCcccHHHHHHhcCCEEEecC-------ChhhCCc---------ccceEEEEcCCCCCCCccCCHH
Confidence                1345788999999999988887787777764       2233321         124567777899999976   6


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhh---hhhhcCCC-cccEEEEcCcccCCCC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEF---RKWLAGVE-YANSIAFNPSKWLMVH  368 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~---~~~~~gie-~aDSi~~d~HK~l~~P  368 (375)
                      .+++|+++|+++|+|+++|.+|+....-.+..   .....+.. .-..++-++.|.++.|
T Consensus       169 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~  228 (364)
T PRK07865        169 HLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLA  228 (364)
T ss_pred             HHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCC
Confidence            68899999999999999999998643211000   00000100 1135677899987543

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=98.86  E-value=6.2e-08  Score=96.32  Aligned_cols=170  Identities=14%  Similarity=0.033  Sum_probs=101.7

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+++++++|.+                       ..+++.||++++..++.+++..... .+.          .+
T Consensus        70 ~~~~l~~~la~~~g~~-----------------------~~~~~~sg~~a~~~a~~~~~~~~~~-~~~----------~~  115 (379)
T TIGR00707        70 PQEELAEKLVEHSGAD-----------------------RVFFCNSGAEANEAALKLARKYTGD-KGK----------EK  115 (379)
T ss_pred             HHHHHHHHHHhhCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHHhhc-cCC----------CC
Confidence            3478899999998865                       3789999999999999887643210 000          01


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeE---EEEecCCCCCc----CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKM---RYIESDDKLSL----RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v---~~Vp~d~~g~m----d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                      +.+++.+..-|.+...+...++...   ...+...+...    |+++|++.+.+.      +.+|+.+..++.+|.+   
T Consensus       116 ~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~p~~~~~g~~~~~  189 (379)
T TIGR00707       116 KKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDE------TAAVIVEPIQGEGGVNPAS  189 (379)
T ss_pred             CeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhC------eeEEEEEccccCCCCccCC
Confidence            2244444444555444443332211   11222222222    899999988653      3356666555555643   


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                       +++++|.++|+++++++++|++|.+.............++ ..|.++  +.|.++..+..|.+
T Consensus       190 ~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~  250 (379)
T TIGR00707       190 AEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGAT  250 (379)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEE
Confidence             4699999999999999999999975422111011111232 246554  58999865666654

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK07505 hypothetical protein; Provisional

Probab=98.85  E-value=8.3e-08  Score=96.88  Aligned_cols=161  Identities=16%  Similarity=0.057  Sum_probs=106.5

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .+...++.+.|++++|..                        .+++++|++||..++..++.....   .          
T Consensus        90 ~~~~~~l~~~la~~~~~~------------------------~~~~~sG~~a~~~ai~~~~~~~~~---~----------  132 (402)
T PRK07505         90 SQILKDLEEALSELFGAS------------------------VLTFTSCSAAHLGILPLLASGHLT---G----------  132 (402)
T ss_pred             hHHHHHHHHHHHHHhCCC------------------------EEEECChHHHHHHHHHHHHhcccC---C----------
Confidence            344578889999988753                        477778899999888766532100   0          


Q ss_pred             cCceEEEecCCCchHHHHH--HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKA--GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~ka--a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      .++.+|+.+...|.|+...  ....+.+++.+|.+     |+++|++++++.      +.+++++.+.+.+|.+.++++|
T Consensus       133 ~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~-----d~~~l~~~~~~~------~~~~vl~~p~~~~G~~~~~~~i  201 (402)
T PRK07505        133 GVPPHMVFDKNAHASLNILKGICADETEVETIDHN-----DLDALEDICKTN------KTVAYVADGVYSMGGIAPVKEL  201 (402)
T ss_pred             CCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC-----CHHHHHHHHhcC------CCEEEEEecccccCCcCCHHHH
Confidence            0223667778999987542  22234577788763     889999988643      2367777888999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcc--cchhhhhhhcCC--CcccEEEEcCcccCCCC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSF--ICPEFRKWLAGV--EYANSIAFNPSKWLMVH  368 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~--~~~~~~~~~~gi--e~aDSi~~d~HK~l~~P  368 (375)
                      .++|++++++|++|++|+.+.+  ....+.....++  ....-++.++-|.++.+
T Consensus       202 ~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~  256 (402)
T PRK07505        202 LRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS  256 (402)
T ss_pred             HHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc
Confidence            9999999999999999853211  111111111122  12234455888987654

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=98.84  E-value=6.3e-08  Score=100.58  Aligned_cols=164  Identities=13%  Similarity=0.051  Sum_probs=123.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+..++.||.+.                      .-.++.|.|.||...+.+...                   ++.
T Consensus        73 ~eAqe~aA~~fgAd~----------------------tyFvvNGTS~ank~vi~a~~~-------------------~GD  111 (557)
T COG1982          73 KEAQELAARVFGADH----------------------TYFVVNGTSTANKAVINAVLT-------------------PGD  111 (557)
T ss_pred             HHHHHHHHHHhCCCc----------------------eEEEECCccHHHHHHHHhhcC-------------------CCC
Confidence            788999999999882                      124555666777777665543                   456


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEec--CC----CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIES--DD----KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~----~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      .|++....|-|+..++.+.|...+.+..  |+    -|.++.+.+++++.+.....   .++++|.+ |..|.+-++++|
T Consensus       112 ~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnp-TYdGv~~n~~~i  187 (557)
T COG1982         112 KVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNP-TYDGVCYNLRKI  187 (557)
T ss_pred             EEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecC-ccceEeecHHHH
Confidence            8999999999999998888887777765  33    26799999999987654321   36677765 788999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .+.+.++++|+.+|.|++...-+++..-... --..+|.++-|.||.+.+=..+|.
T Consensus       188 ~~~~~~~~a~v~~deah~~~~~~~~~l~~~~-~~~~~~~~tqS~HK~l~alSQaS~  242 (557)
T COG1982         188 VELLHHYGAWVLYDEAHPAHFDFSPMLPESA-LNGGADFVTQSTHKLLAALSQASM  242 (557)
T ss_pred             HHHHhhcCceEEhhhcCcccccccccCcchh-hhcCceEEEechhhhhhhhhhhHH
Confidence            9999999999999999999766554322211 012479999999999876544443

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=98.83  E-value=9.4e-08  Score=94.46  Aligned_cols=133  Identities=11%  Similarity=0.079  Sum_probs=105.9

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      +-+++.+|.++-.++..                   .+.+.+|++|---++.+++.+...                   +
T Consensus        65 ~~~ai~~w~~~r~~~~i-------------------~~e~i~~~p~VVpgi~~~I~~~T~-------------------~  106 (388)
T COG1168          65 LYAAIAHWFKQRHQWEI-------------------KPEWIVFVPGVVPGISLAIRALTK-------------------P  106 (388)
T ss_pred             HHHHHHHHHHHhcCCCC-------------------CcceEEEcCcchHhHHHHHHHhCc-------------------C
Confidence            44899999999999984                   345677877766666555544322                   3


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLE  315 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~  315 (375)
                      +..|++....++.+.++....+.++...|.   |..+.||.++||+++.+..     +.+.+.+.+.|++|.|   |.|.
T Consensus       107 gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~Grvwt~eeL~  181 (388)
T COG1168         107 GDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTGRVWTKEELR  181 (388)
T ss_pred             CCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCCccccHHHHH
Confidence            456888889999999999999989988886   3456789999999998653     3367778899999998   8899


Q ss_pred             HHHHHHHhcCCEEEEecccccC
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      +|++||++||+.++.|..|+=.
T Consensus       182 ~i~elc~kh~v~VISDEIHaDl  203 (388)
T COG1168         182 KIAELCLRHGVRVISDEIHADL  203 (388)
T ss_pred             HHHHHHHHcCCEEEeecccccc
Confidence            9999999999999999987654

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=98.83  E-value=9e-08  Score=95.58  Aligned_cols=157  Identities=10%  Similarity=-0.076  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+++.+++.+|++.                     ...++|+|+++++..++.+..+                   ++.
T Consensus        70 ~~Lr~~ia~~~~~~~---------------------~~I~it~G~~~~l~~~~~~~~~-------------------~gd  109 (369)
T PRK08153         70 HDLRHALAAHHGVAP---------------------ENIMVGEGIDGLLGLIVRLYVE-------------------PGD  109 (369)
T ss_pred             HHHHHHHHHHhCCCH---------------------HHEEEcCCHHHHHHHHHHHhcC-------------------CCC
Confidence            455666666667751                     3578888888877665554322                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++.+.+|..+...+...+.+++.||.++++ +|+++|++.+....     +.+|+.+.++++||.+-+.+++.++++.
T Consensus       110 ~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~-~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~~~  183 (369)
T PRK08153        110 PVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR-EDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFIEA  183 (369)
T ss_pred             EEEECCCcchHHHHHHHHcCCeEEEeeCCCCC-CCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence            78899999999988877777899999986664 89998887765321     3366667899999999887777777664


Q ss_pred             c--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         324 E--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       324 ~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      .  ++||++|.+|+-...- ..... +.....--.+.-++.|.++.|
T Consensus       184 ~~~~~~lI~DE~y~~~~~~-~~~~~-~~~~~~~~i~~~SfSK~~g~~  228 (369)
T PRK08153        184 LPETTLLVLDEAYCETAPA-GAAPP-IDTDDPNVIRMRTFSKAYGLA  228 (369)
T ss_pred             CCCCcEEEEeCchhhhcCc-ccchh-hhhcCCCEEEEecchHhccCc
Confidence            3  8999999999764321 00111 111111124566889987644

>PRK08354 putative aminotransferase; Provisional

Probab=98.81  E-value=4.6e-08  Score=95.36  Aligned_cols=142  Identities=15%  Similarity=0.021  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+++++.+|..                        .++|+|+++++...+....                    ++.
T Consensus        43 ~~l~~~ia~~~~~~------------------------I~vt~G~~~al~~~~~~~~--------------------~gd   78 (311)
T PRK08354         43 EWLEEEFSKLFGEP------------------------IVITAGITEALYLIGILAL--------------------RDR   78 (311)
T ss_pred             HHHHHHHHHHHCCC------------------------EEECCCHHHHHHHHHHhhC--------------------CCC
Confidence            45677888887633                        6899999999765443211                    234


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~i  320 (375)
                      .|++.+.++..+.++++..|.+++.++      +|++.|++++++       +.+++.+.++++||.+   +.+++|+++
T Consensus        79 ~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~  145 (311)
T PRK08354         79 KVIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDA  145 (311)
T ss_pred             eEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHH
Confidence            788999999999999988888886653      688999887752       2257778899999998   457778888


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      |+++|+|+++|.+|+....- .  .. .. -+ ---+.-++.|.+++|
T Consensus       146 a~~~~~~li~De~y~~f~~~-~--~~-~~-~~-~vi~~~S~SK~~~l~  187 (311)
T PRK08354        146 VEDRNALLILDEAFIDFVKK-P--ES-PE-GE-NIIKLRTFTKSYGLP  187 (311)
T ss_pred             hhhcCcEEEEeCcchhcccc-c--cc-cC-CC-cEEEEeccHhhcCCc
Confidence            99999999999999775321 1  00 00 01 123456778988754

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=98.81  E-value=4.5e-08  Score=98.91  Aligned_cols=164  Identities=13%  Similarity=0.064  Sum_probs=102.5

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcE--EEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFI--TFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~G--vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      ..++|.-+++.++++||.+.                    ..+.  +=.-+||.||+.++.+..+               
T Consensus        64 id~iE~la~~ra~~lF~~~~--------------------~~w~anvqp~SGs~An~av~~aLl~---------------  108 (399)
T PF00464_consen   64 IDEIEELAIERAKELFGAEP--------------------KEWYANVQPHSGSQANLAVYMALLK---------------  108 (399)
T ss_dssp             HHHHHHHHHHHHHHHHT-ST--------------------TTEEEE---SSHHHHHHHHHHHHT----------------
T ss_pred             hhHHHHHHHHHHHHHhCCCc--------------------ccceEEeecCCchHHHHHHHHHHHh---------------
Confidence            56788899999999999982                    1222  2346899999888877654               


Q ss_pred             hhhcCceEEEec---CCCchHHHHHHH------Hc-CCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC
Q psy1596         237 AEINSRLVAYCS---DQAHSSVEKAGL------IG-LVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT  305 (375)
Q Consensus       237 ~~~~~~~vV~~S---~~aH~Sv~kaa~------lg-~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt  305 (375)
                          +++.|+.-   .-.|.|.-....      .+ ..+++..++| +++.+|.+++++.+++.+     |.+|++-  .
T Consensus       109 ----pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~k-----PklIi~G--~  177 (399)
T PF00464_consen  109 ----PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHK-----PKLIICG--A  177 (399)
T ss_dssp             ----TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH-------SEEEEE---
T ss_pred             ----hcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcC-----CCEEEEC--c
Confidence                22333322   234555433221      11 2467778887 789999999999998763     6565543  3


Q ss_pred             CCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596         306 TGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       306 T~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                      +..--.-|++++.+||++.|.+|++|+||-++.+....+..   .+++||.++.+.||.|..|-+.
T Consensus       178 S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~---P~~~ADvvt~sThKtl~GPrgg  240 (399)
T PF00464_consen  178 SSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPN---PFPYADVVTGSTHKTLRGPRGG  240 (399)
T ss_dssp             SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS-----GCCTSSEEEEESSGGG-SSS-E
T ss_pred             hhccCccCHHHHHHHHHhcCcEEEecccccccceehheecC---ccccceEEEeeccccccccCce
Confidence            44444567899999999999999999999877554433322   3567999999999999999874

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=98.80  E-value=2.9e-08  Score=98.41  Aligned_cols=166  Identities=13%  Similarity=0.024  Sum_probs=119.2

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      -.+++|..+++...+|||.+..                      -+=-.+||+||+.+..+..+                
T Consensus        69 ~VD~vE~laierak~LFga~~a----------------------nVQPhSGs~AN~av~~All~----------------  110 (413)
T COG0112          69 YVDEVEELAIERAKKLFGAEYA----------------------NVQPHSGSQANQAVYLALLQ----------------  110 (413)
T ss_pred             eHHHHHHHHHHHHHHHhCCCcc----------------------ccCCCCchHHHHHHHHHHcC----------------
Confidence            3577889999999999998731                      13345789999998877644                


Q ss_pred             hhcCceEEEecCC---CchHHHHHHHHcC--CeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         238 EINSRLVAYCSDQ---AHSSVEKAGLIGL--VKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       238 ~~~~~~vV~~S~~---aH~Sv~kaa~lg~--~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                         |++.|+.-+.   .|-+--....+.|  .+++..++| +++.+|.|++++.+.+.+     |.+|+  +|.+..--.
T Consensus       111 ---pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~k-----PK~ii--~G~SaY~r~  180 (413)
T COG0112         111 ---PGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVK-----PKLII--AGGSAYSRP  180 (413)
T ss_pred             ---CCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhC-----CCEEE--ECccccccc
Confidence               2334443333   3433332222333  356666777 679999999999998764     66554  466777777


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      -|++++.+||++.|.+|.+|.||-++.+..-.+.   ..+++||.++.+.||+|..|-|.=+|
T Consensus       181 id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p---~P~~~AdvVTtTTHKTlrGPrGG~Il  240 (413)
T COG0112         181 IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHP---NPLPHADVVTTTTHKTLRGPRGGIIL  240 (413)
T ss_pred             cCHHHHHHHHHHhCceEEehHHHHHHHHhcccCC---CCCCccceEeCCcccCCCCCCceEEE
Confidence            8899999999999999999999977754433222   35778999999999999999875443

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=98.79  E-value=1.8e-07  Score=94.58  Aligned_cols=163  Identities=13%  Similarity=0.045  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++.+.|+++++.+                       ...|+++||+||..|+.+||.....+.+   .       .+.
T Consensus        79 ~~~la~~L~~~~~~~-----------------------~~~f~~SGseA~e~Alk~ar~~~~~~~~---~-------~r~  125 (397)
T TIGR03246        79 VLRLAKKLVDATFAD-----------------------KVFFCNSGAEANEAALKLARRYALDKHG---A-------DKS  125 (397)
T ss_pred             HHHHHHHHHhhCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHHHHhcCC---C-------CCC
Confidence            367777888876533                       4799999999999999999875322100   0       123


Q ss_pred             eEEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                      .+|.....-|-+..-++.+.+.            .+..+|.+     |+++|+++|.+.      +.+|+..-.....|.
T Consensus       126 ~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~aavi~Epi~~~~G~  194 (397)
T TIGR03246       126 EIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN-----DLAAAKALISDK------TCAVIVEPIQGEGGV  194 (397)
T ss_pred             EEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC-----CHHHHHHHhccC------eEEEEEecccCCCCC
Confidence            3566666778776655555432            23334432     789999988532      345666644444553


Q ss_pred             ----cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         311 ----FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       311 ----vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                          .+.+++|.++|++||+++++|.+|.|....-.-+.....++ ..|.+++  -|.++.-+..|
T Consensus       195 ~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~lggG~pig  257 (397)
T TIGR03246       195 VPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKALGGGFPIG  257 (397)
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhhhCCccee
Confidence                36699999999999999999999865422111111112244 4687764  67664333344

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PLN02397 aspartate transaminase

Probab=98.79  E-value=9.3e-08  Score=97.48  Aligned_cols=95  Identities=15%  Similarity=0.123  Sum_probs=79.1

Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEec-C-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIES-D-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLE  315 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~  315 (375)
                      +++.|++++.++......+.+.|.+++.||. + +++.+|++.+++.+++..   .+..+++.+.++|+||.+   +.++
T Consensus       141 pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPTG~v~s~e~l~  217 (423)
T PLN02397        141 PGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPTGVDPTPEQWE  217 (423)
T ss_pred             CCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHH
Confidence            3457999999999999999998999999987 3 357899999998886431   124577778899999998   6788


Q ss_pred             HHHHHHHhcCCEEEEecccccCc
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +|+++|++||+|+++|.+|....
T Consensus       218 ~i~~~a~~~~~~vI~De~Y~~l~  240 (423)
T PLN02397        218 QISDLIKSKNHLPFFDSAYQGFA  240 (423)
T ss_pred             HHHHHHHhCCcEEEEecccCCcc
Confidence            89999999999999999998764

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=98.79  E-value=9.2e-08  Score=96.77  Aligned_cols=162  Identities=14%  Similarity=0.032  Sum_probs=105.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+..|++.                   ++...++|+|++++... +....                
T Consensus        76 ~G~~~LR~aia~~~~~~~g~~~-------------------~~~~I~it~Ga~~al~~-l~~~~----------------  119 (409)
T PRK07590         76 QGYDFLREKIAENDYQARGCDI-------------------SADEIFISDGAKCDTGN-ILDIF----------------  119 (409)
T ss_pred             CCCHHHHHHHHHHHHHhcCCcC-------------------ChhhEEECCCHHHHHHH-HHHhc----------------
Confidence            4566677888888887777763                   34467888888888654 22211                


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCe-----------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVK-----------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT  305 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~-----------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt  305 (375)
                         .++..|++.+.++..+...+...|.+           ++.||+++++.+.++ +++         ..+.+|+.+.++
T Consensus       120 ---~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~~~---------~~~k~i~l~nP~  186 (409)
T PRK07590        120 ---GPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPE-LPE---------EKVDIIYLCFPN  186 (409)
T ss_pred             ---CCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCccc-Ccc---------cCceEEEEeCCC
Confidence               13457889999999998888776654           888998644333332 111         124466667899


Q ss_pred             CCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcc-c-EE-EEcCcccCCCC
Q psy1596         306 TGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYA-N-SI-AFNPSKWLMVH  368 (375)
Q Consensus       306 T~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~a-D-Si-~~d~HK~l~~P  368 (375)
                      ++||.+   +.+++|+++|++|++||++|.+|+-...- ...-..+..+... + .| .-++.|.++.|
T Consensus       187 NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~~~p  254 (409)
T PRK07590        187 NPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISD-PSLPHSIYEIEGARECAIEFRSFSKTAGFT  254 (409)
T ss_pred             CCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccC-CCCCcchhhCCCcccceEEEecCccccCCc
Confidence            999988   56788889999999999999999864321 1000111122111 2 33 45899988644

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=98.76  E-value=1.3e-07  Score=105.07  Aligned_cols=159  Identities=6%  Similarity=-0.074  Sum_probs=109.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|+.+.-.+...++++|+|++.                     ....++.++|.+.-.++++.+...             
T Consensus       144 QG~lqal~~~Qt~ia~LtG~~~---------------------anaSL~d~aTAaaea~~~a~~~~~-------------  189 (993)
T PLN02414        144 QGRLESLLNYQTMITDLTGLPM---------------------SNASLLDEGTAAAEAMAMCNNILK-------------  189 (993)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCh---------------------hhEeecCChHHHHHHHHHHHhccc-------------
Confidence            5555555788899999999983                     357889999987655544432210             


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                         .++..|++++..|.+....++    -.|.+++.+|.++.   +      ...+      ..+.++... .+.+|.+.
T Consensus       190 ---g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~~------~v~~vlvq~-P~~~G~v~  250 (993)
T PLN02414        190 ---GKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSSG------DVCGVLVQY-PATDGEVL  250 (993)
T ss_pred             ---CCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cccC------ceEEEEEec-CCCCeEEc
Confidence               023479999999999988763    24778888887431   1      0111      133444443 46799999


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc-----ceeeC
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD-----CTAMW  375 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~-----~g~l~  375 (375)
                      |+++|+++|+++|+.+.| +|...+.........    + .||.++.++|||+ +|.|     +|+|+
T Consensus       251 dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge----~-GADi~vgsgqKwg-~P~G~GGP~aGfla  311 (993)
T PLN02414        251 DYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGE----W-GADIVVGSAQRFG-VPMGYGGPHAAFLA  311 (993)
T ss_pred             CHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhh----c-cCcEEEECCCccc-cCCCCCCCCeeEEE
Confidence            999999999999999999 888776544421111    1 4799999999997 6766     56653

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=98.76  E-value=4.7e-07  Score=89.76  Aligned_cols=145  Identities=12%  Similarity=0.020  Sum_probs=95.7

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCc
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSL  277 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~m  277 (375)
                      ...++|+|+++++..++.+..+                   ++..|++.+.++......+.+.+.+++.+|.+  +++.+
T Consensus        83 ~~I~it~G~~~al~~~~~~~~~-------------------~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~  143 (357)
T PRK14809         83 EQVWLANGGDGALDYLARAMLD-------------------PGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQ  143 (357)
T ss_pred             ceEEECCCHHHHHHHHHHHhcC-------------------CCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCc
Confidence            3578999999988766654322                   34578888888877777777778888888874  35678


Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc--CCEEEEecccccCcccchhhhhhhcCCCccc
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYAN  355 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD  355 (375)
                      |.+++++.+. .      +.+|+.+.++++||.+-+.+++.++++..  +++|++|.+|+.... .+.....+..  .-.
T Consensus       144 ~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~-~~~~~~~~~~--~~~  213 (357)
T PRK14809        144 TADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAE-RPSAVALVEE--RDD  213 (357)
T ss_pred             CHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccC-CchhHHHHhh--CCC
Confidence            8888777642 1      23677778999999997777776666543  789999999986532 1111111111  112


Q ss_pred             E-EEEcCcccCCCC-Cccee
Q psy1596         356 S-IAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       356 S-i~~d~HK~l~~P-~~~g~  373 (375)
                      . +.-++.|.++.| +-+|.
T Consensus       214 vi~~~SfSK~~~~~GlRiG~  233 (357)
T PRK14809        214 VAVLRTFSKAYGLAGLRLGY  233 (357)
T ss_pred             EEEEecchhHhcCcchhhee
Confidence            2 345888988644 33443

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=98.75  E-value=3.5e-07  Score=91.25  Aligned_cols=158  Identities=10%  Similarity=-0.034  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc-
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR-  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~-  242 (375)
                      ..+++.+++.+|.+.                     ...++|+|+++++..++.+...                   ++ 
T Consensus        62 ~~lr~~ia~~~~~~~---------------------~~I~~t~G~~~~l~~~~~~~~~-------------------~g~  101 (364)
T PRK04781         62 PGLRSALAALYGCAP---------------------EQLLIGRGSDEAIDLLVRALCV-------------------PGR  101 (364)
T ss_pred             HHHHHHHHHHhCcCh---------------------HHEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence            566777788888762                     3578999999998776654321                   22 


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecC--C-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESD--D-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      ..|++++..+..+...++..|.+++.||.+  + .+.+|++++++.+...     .+.+|+++.++++||.+-+.+++.+
T Consensus       102 ~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~  176 (364)
T PRK04781        102 DAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIER  176 (364)
T ss_pred             CeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHH
Confidence            467888888766666667788899999974  2 3468999886655321     1346677789999999988887777


Q ss_pred             HHHh--cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEK--EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~--~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +++.  +++|+++|.+|+-... .+.........++ =.+.-++.|.++.|
T Consensus       177 l~~~~~~~~~iI~Deay~~f~~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~  225 (364)
T PRK04781        177 ALQALQGKALVVVDEAYGEFSD-VPSAVGLLARYDN-LAVLRTLSKAHALA  225 (364)
T ss_pred             HHHhCCCCcEEEEeCcchhhcC-CcchHHHHhhCCC-EEEEecChhhcccc
Confidence            7764  4899999999986532 1111111111111 14567888977644

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=98.73  E-value=1.9e-07  Score=93.64  Aligned_cols=170  Identities=16%  Similarity=0.088  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      .+.++.+.|+++.+.+                       ..+|++|||+||..|+.++|.....+ +  ..       .+
T Consensus        74 ~~~~la~~l~~~~~~~-----------------------~v~~~~sGseA~~~al~~ar~~~~~~-G--~~-------~r  120 (389)
T PRK01278         74 EQERLAERLVENSFAD-----------------------KVFFTNSGAEAVECAIKTARRYHYGK-G--HP-------ER  120 (389)
T ss_pred             HHHHHHHHHHhhCCCC-----------------------EEEEcCCcHHHHHHHHHHHHHHHHhc-C--CC-------CC
Confidence            3467777888775432                       47999999999999999998753221 0  00       01


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEE---EecCCCCC----cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc----
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRY---IESDDKLS----LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA----  310 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~---Vp~d~~g~----md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa----  310 (375)
                      +.+|.....-|.+..-+..+++.....   .|..++..    .|+++|+++|+++      +.+|+.+-..+.+|.    
T Consensus       121 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~  194 (389)
T PRK01278        121 YRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAP  194 (389)
T ss_pred             CEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCC
Confidence            234555555565555554444322111   12112222    5899999998642      345666644445552    


Q ss_pred             cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         311 FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       311 vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      -+.+++|.++|++||+++++|.+|.+......-+.....++ ..|.++  +.|.+..-+..|.
T Consensus       195 ~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~l~~G~~ig~  254 (389)
T PRK01278        195 DEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGV-TPDIMA--VAKGIGGGFPLGA  254 (389)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCC-CCCEEE--EehhccCCcceEE
Confidence            26899999999999999999999986532111001111233 246554  4687753333443

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=98.73  E-value=1.9e-07  Score=91.82  Aligned_cols=151  Identities=11%  Similarity=0.004  Sum_probs=103.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++.+|.+.                     ...++|+|+++++..++.. ..                   ++.
T Consensus        43 ~~lr~~ia~~~~~~~---------------------~~I~it~Gs~~~l~~~~~~-~~-------------------~~~   81 (332)
T PRK06425         43 TDIEDQIKIYTQGLK---------------------IKVLIGPGLTHFIYRLLSY-IN-------------------VGN   81 (332)
T ss_pred             HHHHHHHHHHhCCCc---------------------ceEEECCCHHHHHHHHHHH-hC-------------------CCc
Confidence            778888999999872                     3478899999987766532 11                   222


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~i  320 (375)
                      ++ +.+.++..+...++..|.+++.||.++ ..+|.+.+++    .     .+.+|+.+.++++||.+   +.+++|+++
T Consensus        82 vv-~~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~  150 (332)
T PRK06425         82 II-IVEPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN----Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEI  150 (332)
T ss_pred             EE-EeCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh----c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHH
Confidence            44 448899999999999999999999875 4456655542    1     13467777899999997   557788888


Q ss_pred             HHhcCCEEEEecccccCcccc-hhhhhhhcCCCcccE-EEEcCcccCCCC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGVEYANS-IAFNPSKWLMVH  368 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gie~aDS-i~~d~HK~l~~P  368 (375)
                      |+++++||++|.+|+-...-. +........-  -.. +.-++.|.++.|
T Consensus       151 a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~--~~vi~~~SfSK~~~l~  198 (332)
T PRK06425        151 CRKKGALLFIDEAFIDFVPNRAEEDVLLNRSY--GNVIIGRSLTKILGIP  198 (332)
T ss_pred             HHHcCCEEEEecchhccccccchhHHHHhccC--CCEEEEeecHHhcCCc
Confidence            999999999999998653211 1111111111  123 445889987744

>PRK07049 methionine gamma-lyase; Validated

Probab=98.73  E-value=6.9e-07  Score=91.46  Aligned_cols=150  Identities=13%  Similarity=-0.001  Sum_probs=109.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++.|.+                       ..++++||+.|+..++.+..+                   ++.
T Consensus        86 ~~Le~~lA~leg~~-----------------------~~iv~~sG~~Ai~~~l~al~~-------------------~Gd  123 (427)
T PRK07049         86 EIVEDRLAVYEGAE-----------------------SAALFSSGMSAIATTLLAFVR-------------------PGD  123 (427)
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEEccHHHHHHHHHHHHhC-------------------CCC
Confidence            67778888887744                       378999999997777655432                   345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+......+    ...|.+++.++.    ..|.++|+++|++..++. .+.+|++..++|++|.+-++++|.+
T Consensus       124 ~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~----~~d~~~l~~~l~~~~~~~-~tklv~lesP~NPtg~v~d~~~l~~  198 (427)
T PRK07049        124 VILHSQPLYGGTETLLAKTFRNFGVGAVGFAD----GLSEAAIGAAAEAAAAKG-RVSLILIETPANPTNSLVDVAAVRR  198 (427)
T ss_pred             EEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC----CCCHHHHHHHHHhhccCC-CceEEEEECCCCCCCcccCHHHHHH
Confidence            7888888887776653    234666666652    257889998887543222 2557888899999999999999999


Q ss_pred             HHHh------cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         320 ICEK------EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       320 ia~~------~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      ++++      ++++++||.+|.......|    +..   .+|-+.-++.|.++.
T Consensus       199 la~~~~~~~~~~~~vvvDety~~~~~~~p----l~~---g~divv~S~SK~~gG  245 (427)
T PRK07049        199 VADAIEARQGHRPIIACDNTLLGPVFQKP----LEH---GADLSVYSLTKYVGG  245 (427)
T ss_pred             HHHHhhhcccCCCEEEEECCccccccCCc----ccc---CCCEEEEcCceeecC
Confidence            9987      8999999999877543222    111   369999999999884

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=98.73  E-value=3.5e-07  Score=91.20  Aligned_cols=161  Identities=14%  Similarity=0.109  Sum_probs=100.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .+++.++.+++++..+.+                       ..+|+++|++||..|+..+|...                
T Consensus        70 ~~~~~~la~~l~~~~~~~-----------------------~~~~~~sG~~a~~~A~~~a~~~~----------------  110 (377)
T PRK02936         70 NSLQEEVASLLAENSAGD-----------------------LVFFCNSGAEANEAALKLARKHT----------------  110 (377)
T ss_pred             CHHHHHHHHHHHhcCCCC-----------------------EEEEeCCcHHHHHHHHHHHHHhc----------------
Confidence            445577777777765432                       47999999999999999887531                


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG  307 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~  307 (375)
                      .++.++.....-|-+..-++.+.+.            .+..+|.+     |+++|++.+.+.      +.+|+.....+.
T Consensus       111 g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~------~~~ii~e~i~~~  179 (377)
T PRK02936        111 GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN-----DIKALKEVMNEE------VAAVMLEVVQGE  179 (377)
T ss_pred             CCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC-----CHHHHHHhccCC------eEEEEEecccCC
Confidence            0123566666778776666544332            11223322     789999988543      335666555555


Q ss_pred             cccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         308 ACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       308 tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .|.+    +.+++|.++|++||+++++|.+|.+.......+.....++ ..|.++  +.|.+..-+..|.
T Consensus       180 ~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ig~  246 (377)
T PRK02936        180 GGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGL-DPDIVT--VAKGLGNGIPVGA  246 (377)
T ss_pred             CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCC-CCcEEE--EcccccCCCccEE
Confidence            5554    4599999999999999999999976422110011011233 246554  6898774334443

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=98.73  E-value=2.4e-07  Score=92.75  Aligned_cols=172  Identities=12%  Similarity=0.042  Sum_probs=101.6

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ...+.++.++|+++.|.+                       ..+||+||++|+..|+.+++..... ..          .
T Consensus        80 ~~~~~~la~~l~~~~~~~-----------------------~v~~~~gg~eA~~~al~~a~~~~~~-~~----------~  125 (396)
T PRK02627         80 IEPQEELAEKLVELSGMD-----------------------KVFFCNSGAEANEAAIKLARKYGHK-KG----------I  125 (396)
T ss_pred             CHHHHHHHHHHHhhcCCC-----------------------EEEECCCcHHHHHHHHHHHHHHhcc-cC----------C
Confidence            445578889999886654                       4799999999999999998864211 00          0


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEE---EEecCCCC----CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc--
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMR---YIESDDKL----SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA--  310 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~---~Vp~d~~g----~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa--  310 (375)
                      .+..++.....-|-...-+..+.+....   ..+..++.    .-|+++|++++.+.      +.+|+.+...+++|.  
T Consensus       126 ~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~  199 (396)
T PRK02627        126 EKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNP  199 (396)
T ss_pred             CCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCcc
Confidence            0122444445556444444444432211   11211111    12899999988432      345666555556662  


Q ss_pred             --cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         311 --FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       311 --vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                        -+.+++|.++|++||++|++|.+|++.............++ ..|.+++  -|.++..+..|.+
T Consensus       200 ~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~~~~G~rig~~  262 (396)
T PRK02627        200 ADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGI-EPDIMTL--AKGLGGGVPIGAV  262 (396)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCC-CCCEEEE--cchhhCCcccEEE
Confidence              25699999999999999999999986422110000001233 3466654  5887754555543

>KOG0259|consensus

Probab=98.72  E-value=1.7e-07  Score=92.43  Aligned_cols=117  Identities=9%  Similarity=0.164  Sum_probs=95.9

Q ss_pred             CCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCC
Q psy1596         198 PPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKL  275 (375)
Q Consensus       198 ~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g  275 (375)
                      ...+.++|+|.++|+-+++.+.-+                   ++.-|+++.....-..--+...+.++|....  +.++
T Consensus       125 ~a~DV~ltsGC~qAIe~~i~~LA~-------------------p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~w  185 (447)
T KOG0259|consen  125 TADDVVLTSGCSQAIELAISSLAN-------------------PGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDW  185 (447)
T ss_pred             CcCceEEeccchHHHHHHHHHhcC-------------------CCCceecCCCCCchHHHhhhhcCceeEeecccCcccc
Confidence            446789999999999888765422                   3446889988866555556777888887764  6899


Q ss_pred             CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596         276 SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       276 ~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                      ++|++.+|.++++.+      ++++++-+++++|.|   +.|++|+++|+|+++.++.|..|+-...
T Consensus       186 eIDL~~veal~DENT------~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vf  246 (447)
T KOG0259|consen  186 EIDLDGVEALADENT------VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVF  246 (447)
T ss_pred             eechHHHHHhhccCe------eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeec
Confidence            999999999998874      478888899999988   8999999999999999999999987543

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=98.71  E-value=3.5e-07  Score=92.60  Aligned_cols=154  Identities=12%  Similarity=0.040  Sum_probs=97.7

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEE---EEecCCCC--
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMR---YIESDDKL--  275 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~---~Vp~d~~g--  275 (375)
                      ..+|+++||+||..|+..+|.... +.+   +       .++.+|.....-|-+..-++.+.+....   ..|.....  
T Consensus        95 ~v~f~~SGseA~e~Aik~ar~~~~-~~~---~-------~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~  163 (395)
T PRK03715         95 KVFFANSGAEANEGAIKLARKWGR-KHK---N-------GAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPK  163 (395)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHhh-ccC---C-------CCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCcee
Confidence            479999999999999999986421 000   0       1233566677788888777766543211   11111111  


Q ss_pred             --CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc
Q psy1596         276 --SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA  349 (375)
Q Consensus       276 --~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~  349 (375)
                        .-|+++|++++++.      ..+|++.-...+.|.+-+    +++|.++|++||+++++|.++.|....-.-+.....
T Consensus       164 ~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~  237 (395)
T PRK03715        164 AELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELS  237 (395)
T ss_pred             eCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhc
Confidence              24788999888532      346666655566677755    999999999999999999999874332211111123


Q ss_pred             CCCcccEEEEcCcccCCCCCcceee
Q psy1596         350 GVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       350 gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++ ..|.+++.  |.++..++.|++
T Consensus       238 gv-~PDi~t~g--K~lg~G~p~~av  259 (395)
T PRK03715        238 GI-EPDIMTLG--KGIGGGVPLAAL  259 (395)
T ss_pred             CC-CCceeeeh--hhhhCCcceEEE
Confidence            55 47887774  877764555543

>KOG2040|consensus

Probab=98.71  E-value=2.1e-07  Score=96.71  Aligned_cols=172  Identities=15%  Similarity=0.116  Sum_probs=132.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|.+++-.++..||+++.|++.                       ..|+ .+|.++-..+|++.|.+...+ ++      
T Consensus       578 qGY~~lf~~Le~~Lc~iTG~D~-----------------------~s~QPNsGA~GEYaGL~~IRaY~~~k-ge------  627 (1001)
T KOG2040|consen  578 QGYQQLFTELEKDLCEITGFDS-----------------------FSLQPNSGAQGEYAGLRVIRAYLESK-GE------  627 (1001)
T ss_pred             hhHHHHHHHHHHHhheeecccc-----------------------eeecCCCCcccchhhHHHHHHHHHhc-cC------
Confidence            5677777899999999999982                       2333 245566777888877764321 11      


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-ccH
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DNL  314 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dpl  314 (375)
                          ..+-+.+++-.+|-.....+.+.|.+++.|.++.+|.+|..+|++..++...+   -.++.+|.++|. |.+ ..|
T Consensus       628 ----~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~---Laa~MvTYPST~-GvfE~~i  699 (1001)
T KOG2040|consen  628 ----GHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDN---LAALMVTYPSTH-GVFEEGI  699 (1001)
T ss_pred             ----CcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhh---hheeEEeccccc-ccccccH
Confidence                23558899999999999999999999999999999999999999998876543   457889999874 555 679


Q ss_pred             HHHHHHHHhcCCEEEEecccccC-cccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGS-SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~-~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      ++++++.++||--+..|||---. .-+|.      .|--.+|..-++.||++.+|.|.|
T Consensus       700 ~d~cd~iHehGGQVYlDGANMNAqVGlc~------pGd~GaDV~HLNLHKTFcIPHGGG  752 (1001)
T KOG2040|consen  700 DDICDIIHEHGGQVYLDGANMNAQVGLCR------PGDIGADVCHLNLHKTFCIPHGGG  752 (1001)
T ss_pred             HHHHHHHHhcCCEEEecCCCccceecccC------CccccccceeecccceeeecCCCC
Confidence            99999999999999999985322 11221      122257999999999999999876

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=98.71  E-value=5.7e-07  Score=89.33  Aligned_cols=140  Identities=14%  Similarity=-0.045  Sum_probs=94.4

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCC---
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLS---  276 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~---  276 (375)
                      ...++|+|+++++..++.+. .                   ++..|++.+.++..+...+...|.+++.||.++++.   
T Consensus        75 ~~I~it~G~~~~i~~~~~~l-~-------------------~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  134 (360)
T PRK07392         75 EWILPGNGAAELLTWAGREL-A-------------------QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPG  134 (360)
T ss_pred             hhEEECCCHHHHHHHHHHHh-C-------------------CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcc
Confidence            35788999998877665432 1                   123688899999999999988889999999875443   


Q ss_pred             --cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCC
Q psy1596         277 --LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVE  352 (375)
Q Consensus       277 --md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie  352 (375)
                        .+++.+++...       .+.+++.+.++++||.+-+.++|.++++++++ +++|.+|.....-.  +.....+..-+
T Consensus       135 ~~~~~~~~~~~~~-------~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~  206 (360)
T PRK07392        135 LTLRLQTLPPQLT-------PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYP  206 (360)
T ss_pred             cccCHHHHHHhcc-------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCC
Confidence              34555443321       24477778899999999999999999999985 67799998754210  01111111111


Q ss_pred             cccEEEEcCcccCCCC
Q psy1596         353 YANSIAFNPSKWLMVH  368 (375)
Q Consensus       353 ~aDSi~~d~HK~l~~P  368 (375)
                      .+ .+.-++.|.++.|
T Consensus       207 ~v-i~i~S~SK~~~l~  221 (360)
T PRK07392        207 NL-IILRSLTKFYSLP  221 (360)
T ss_pred             CE-EEEEechhhhcCC
Confidence            11 3455889988744

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=98.69  E-value=1e-07  Score=96.32  Aligned_cols=139  Identities=14%  Similarity=0.107  Sum_probs=94.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++.+.+|+.+..|.+.                   ++...++|+|+++++..++.+.....     ..      
T Consensus        74 ~G~~~LR~aia~~~~~~~g~~v-------------------~~~~I~it~Ga~~al~~~~~~l~~~~-----~~------  123 (416)
T PRK09440         74 QGKDELIEALAALLNERYGWNI-------------------SPQNIALTNGSQSAFFYLFNLFAGRR-----AD------  123 (416)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------ChhhEEEccChHHHHHHHHHHHhccc-----cC------
Confidence            3556777888999988888763                   33468899999998777665443210     00      


Q ss_pred             hhhcCceEEEe-cCCCchHHHHHHHHcC----CeEEEEecCC---CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596         237 AEINSRLVAYC-SDQAHSSVEKAGLIGL----VKMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA  308 (375)
Q Consensus       237 ~~~~~~~vV~~-S~~aH~Sv~kaa~lg~----~~v~~Vp~d~---~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t  308 (375)
                         .++..|++ .+.++..+...+...+    ..++.+++++   ++.+|+++|+  +..      .+.+++.+.++++|
T Consensus       124 ---~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~P~NPT  192 (416)
T PRK09440        124 ---GSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSRPTNPT  192 (416)
T ss_pred             ---CCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEecCCCCC
Confidence               02345667 5777777766554222    2223334433   3579999997  221      24577788899999


Q ss_pred             ccc---ccHHHHHHHHHhcCCEEEEeccccc
Q psy1596         309 CAF---DNLEELGPICEKEGLWLHVDAAYAG  336 (375)
Q Consensus       309 Gav---Dpl~eI~~ia~~~~iwlHVDaA~gg  336 (375)
                      |.+   +.+++|+++|+++++|+++|.+|+-
T Consensus       193 G~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~  223 (416)
T PRK09440        193 GNVLTDEELEKLDALARQHNIPLLIDNAYGP  223 (416)
T ss_pred             CccCCHHHHHHHHHHHHHcCCcEEEeCCccc
Confidence            998   5588899999999999999999974

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=98.67  E-value=9.3e-07  Score=89.34  Aligned_cols=130  Identities=12%  Similarity=0.118  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++.+.|+++.+.+                       ...|+++||+||..|+..+|.......+          ..++
T Consensus        84 ~~~l~~~l~~~~~~~-----------------------~~~~~~sGseA~e~a~klar~~~~~~~~----------~~~~  130 (403)
T PRK05093         84 ALRLAKKLIDATFAE-----------------------RVFFANSGAEANEAAFKLARRYACDRHG----------PEKT  130 (403)
T ss_pred             HHHHHHHHHhhCCCC-----------------------EEEEeCchHHHHHHHHHHHHHHHhhcCC----------CCCC
Confidence            357778888876443                       4689999999999999999875421100          0123


Q ss_pred             eEEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                      .+|.....-|-+..-+..+++            .++..+|.+     |+++|++.+.+.      +.+|+.. +...+|.
T Consensus       131 ~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~aaiiie-p~~~~gg  198 (403)
T PRK05093        131 EIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN-----DLAAVKAVIDDH------TCAVVVE-PIQGEGG  198 (403)
T ss_pred             eEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-----CHHHHHHHhcCC------eEEEEEe-cccCCCC
Confidence            466677777877665544322            123334332     789999888532      3456655 4455543


Q ss_pred             -c----ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596         311 -F----DNLEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       311 -v----Dpl~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                       +    +.+++|.++|++||+++++|.+|.+.
T Consensus       199 ~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~  230 (403)
T PRK05093        199 VIPATPEFLQGLRELCDQHNALLIFDEVQTGM  230 (403)
T ss_pred             CccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence             3    45999999999999999999999864

>PLN02624 ornithine-delta-aminotransferase

Probab=98.66  E-value=1.4e-06  Score=90.33  Aligned_cols=168  Identities=14%  Similarity=0.055  Sum_probs=103.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|++++|++                       ..+|+++||+||-.|+..||.....+.+.  +.      .+..
T Consensus       120 ~~la~~L~~~~~~~-----------------------~~~f~~SGseA~e~AlklAr~~~~~~~g~--~~------~~~~  168 (474)
T PLN02624        120 PEFAEYLTSMFGYD-----------------------MVLPMNTGAEGVETAIKLARKWGYEKKGI--PK------NEAI  168 (474)
T ss_pred             HHHHHHHHhhcCCC-----------------------eEEEeCChHHHHHHHHHHHHHHHHhhcCC--CC------CCcE
Confidence            66778888887654                       36899999999999999998752211000  00      0112


Q ss_pred             EEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                      +|.....-|-...-+..+.+.            .+..+|.+     |++.|+++++..   +....+|++.-..+++|.+
T Consensus       169 ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~~~iaaiiiEpv~~~~G~v  240 (474)
T PLN02624        169 IVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG-----DLDALEKIFEED---GDRIAAFLFEPIQGEAGVV  240 (474)
T ss_pred             EEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC-----CHHHHHHHHHhC---CCCEEEEEECCccCCCCCc
Confidence            333433344333333322211            12334332     789999998642   2235577777777788987


Q ss_pred             cc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596         312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                      -|    |++|.++|++||+++++|++|.|.......+.....++ ..|.++++  |.++.. +.+|.
T Consensus       241 ~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~ls--K~lggG~~piga  304 (474)
T PLN02624        241 IPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEV-RPDVVILG--KALGGGVIPVSA  304 (474)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCC-CCCEEEec--ccccCCCCccee
Confidence            65    99999999999999999999986432111111112344 46888875  877655 34444

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=98.65  E-value=8.7e-07  Score=89.61  Aligned_cols=145  Identities=14%  Similarity=0.111  Sum_probs=108.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++-|-.                       ..+++++|..|+..++.+...                   ++.
T Consensus        58 ~~le~~la~Le~g~-----------------------~a~~~~SGmaAi~~~l~~ll~-------------------~Gd   95 (386)
T PF01053_consen   58 RALEQRLAALEGGE-----------------------DALLFSSGMAAISAALLALLK-------------------PGD   95 (386)
T ss_dssp             HHHHHHHHHHHT-S-----------------------EEEEESSHHHHHHHHHHHHS--------------------TTB
T ss_pred             HHHHHHHHHhhccc-----------------------ceeeccchHHHHHHHHHhhcc-------------------cCC
Confidence            67778888886544                       468899999998887776532                   245


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...+....+-+.    -.++++..++.     -|+++|++++++.      +.+|.+..+++++..+-||++|++
T Consensus        96 ~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-----~d~~~l~~~l~~~------t~~v~~EspsNP~l~v~Dl~~i~~  164 (386)
T PF01053_consen   96 HIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-----TDLEALEAALRPN------TKLVFLESPSNPTLEVPDLEAIAK  164 (386)
T ss_dssp             EEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-----TSHHHHHHHHCTT------EEEEEEESSBTTTTB---HHHHHH
T ss_pred             ceEecCCccCcchhhhhhhhcccCcEEEEeCc-----hhHHHHHhhcccc------ceEEEEEcCCCcccccccHHHHHH
Confidence            68888887777666553    25778887765     3899999999874      448999999999999999999999


Q ss_pred             HHHhcC-CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEKEG-LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~~-iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|+++| +.+.||..++.+...-|    +-.|   ||-+.-|..|++...
T Consensus       165 ~a~~~g~~~~vVDnT~atp~~~~p----L~~G---aDivv~S~TKyl~Gh  207 (386)
T PF01053_consen  165 LAKEHGDILVVVDNTFATPYNQNP----LELG---ADIVVHSATKYLSGH  207 (386)
T ss_dssp             HHHHTTT-EEEEECTTTHTTTC-G----GGGT----SEEEEETTTTTTTS
T ss_pred             HHHHhCCceEEeeccccceeeecc----CcCC---ceEEEeeccccccCC
Confidence            999998 99999999999855433    2224   799999999998644

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=98.59  E-value=8.9e-07  Score=88.49  Aligned_cols=147  Identities=12%  Similarity=0.031  Sum_probs=91.2

Q ss_pred             EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEE------EEecCCCC
Q psy1596         202 ITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMR------YIESDDKL  275 (375)
Q Consensus       202 GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~------~Vp~d~~g  275 (375)
                      .+|++|||+||..|+..+|...                .++.+|.....-|-+...++.+.+.+..      .++.....
T Consensus        87 ~~~~~SGseA~~~Al~~ar~~~----------------~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (375)
T PRK04260         87 AFFCNSGAEANEAAIKIARKAT----------------GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA  150 (375)
T ss_pred             EEEcCccHHHHHHHHHHHHHhc----------------CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe
Confidence            6899999999999999998641                0123555667779887777655432111      01100001


Q ss_pred             -CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc----cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcC
Q psy1596         276 -SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD----NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAG  350 (375)
Q Consensus       276 -~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD----pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~g  350 (375)
                       ..|+++|++++.+.      ..+|+.....+++|.+-    .+++|.++|+++|+++++|++|.+......-+.....+
T Consensus       151 ~~~dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~  224 (375)
T PRK04260        151 IFNDLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYG  224 (375)
T ss_pred             CCCCHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhC
Confidence             24889999887532      34666666666777763    49999999999999999999997643211111111224


Q ss_pred             CCcccEEEEcCcccCCCCCccee
Q psy1596         351 VEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       351 ie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      + .-|.+  ++.|.+..-+..|.
T Consensus       225 ~-~pdi~--t~sK~l~~G~~ig~  244 (375)
T PRK04260        225 I-EPDIF--TLAKGLANGVPVGA  244 (375)
T ss_pred             C-CCCEE--EecccccCCcceEE
Confidence            3 34644  57897763233443

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=98.57  E-value=1.8e-06  Score=87.52  Aligned_cols=162  Identities=15%  Similarity=0.092  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|+++++.+                       ..+|+++||+||-.|+.+||.....+..   .       .+..
T Consensus        84 ~~la~~l~~~~~~~-----------------------~v~~~~sGseA~e~Alk~ar~~~~~~~~---~-------~r~~  130 (406)
T PRK12381         84 LRLAKKLIDATFAD-----------------------RVFFCNSGAEANEAALKLARKYAHDRYG---S-------HKSG  130 (406)
T ss_pred             HHHHHHHHhhCCCC-----------------------eEEEcCCcHHHHHHHHHHHHHHHhhcCC---C-------CCCe
Confidence            56777888876433                       4799999999999999999875321100   0       1223


Q ss_pred             EEEecCCCchHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc-
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA-  310 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa-  310 (375)
                      ++.....-|-+..-++.+++..            +..+|.     -|+++|++.+++.      +.+|+.. +...+|. 
T Consensus       131 ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~------~aaviiE-Pv~~~gg~  198 (406)
T PRK12381        131 IVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNSASALIDDQ------TCAVIVE-PIQGEGGV  198 (406)
T ss_pred             EEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-----CCHHHHHHhccCC------eeEEEEe-CCcCCCCC
Confidence            5555666676665454554421            222332     3789999888532      3355554 5555553 


Q ss_pred             ----cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         311 ----FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       311 ----vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                          .+.+++|.++|++||+++++|.+|.+....-.-+.....++ ..|.++  .-|.++.-+..|.
T Consensus       199 ~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v-~pDi~t--~sK~l~gG~~ig~  262 (406)
T PRK12381        199 IPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDVLT--TAKALGGGFPIGA  262 (406)
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCC-CCCEEE--ehhhhhCCCceEE
Confidence                47899999999999999999999966432111111112244 357654  4687754344443

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.57  E-value=1.6e-06  Score=88.33  Aligned_cols=156  Identities=11%  Similarity=0.056  Sum_probs=95.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|+.+.--+...+++++.|+|..                     ..-+..++|.+-=.++++.|...             
T Consensus       106 QG~Lq~lfe~Qs~i~eLTGmdva---------------------NaSlyd~atA~aEa~~ma~r~~~-------------  151 (429)
T PF02347_consen  106 QGRLQALFEYQSMICELTGMDVA---------------------NASLYDGATAAAEAMLMAVRATK-------------  151 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSEE----------------------SEBSSCCHHHHHHHHHHHHHHT-------------
T ss_pred             HHHHHHHHHHHHHHHHhhCCCcc---------------------CCCCCChhHHHHHHHHHHHHhcc-------------
Confidence            56666667889999999999830                     11233444433222222233211             


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                         .++-.|++++..|......++    ..+.+++.+|.++++..|        .+      ....|+++.++ ..|.++
T Consensus       152 ---~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~~------~~a~v~vq~Pn-~~G~~e  213 (429)
T PF02347_consen  152 ---RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------DD------DTAAVMVQNPN-TFGVFE  213 (429)
T ss_dssp             ---T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------ST------TEEEEEEESS--TTSB--
T ss_pred             ---cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------cc------CeEEEEeecCC-CCceEe
Confidence               012379999999998887654    257789999998888887        22      25689999885 579998


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCc--ccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSS--FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~--~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      ++++|+++++++|..+++ +|--.+.  +-.|.  .  -   .||-+ +.-||.+++|.+.|.
T Consensus       214 d~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pg--e--~---GADI~-vg~~Q~fg~p~~~GG  267 (429)
T PF02347_consen  214 DIKEIADIAHAAGALVIV-GADPNALGGLKSPG--E--Y---GADIV-VGEHQTFGIPMGFGG  267 (429)
T ss_dssp             THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GG--G--G---T-SEE-EECCTTTT---CCC-
T ss_pred             eHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChh--h--c---CccEE-eeCCCCCcccCCCCC
Confidence            899999999999999887 7654332  22232  1  1   37988 777999999998873

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>KOG1359|consensus

Probab=98.54  E-value=3.4e-07  Score=87.81  Aligned_cols=162  Identities=13%  Similarity=-0.003  Sum_probs=119.1

Q ss_pred             CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596         152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH  231 (375)
Q Consensus       152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~  231 (375)
                      ...+.+|++.+++.+...++++-|-+                       +-++.+++-.||.-++.+..+          
T Consensus       103 svrfIcGtq~iHk~LE~kiAqfh~rE-----------------------D~ilypscfdANag~feail~----------  149 (417)
T KOG1359|consen  103 SVRFICGTQDIHKLLESKIAQFHGRE-----------------------DTILYPSCFDANAGAFEAILT----------  149 (417)
T ss_pred             ceeEEecchHHHHHHHHHHHHHhCCC-----------------------ceEEeccccccchHHHHHhcC----------
Confidence            45678999999999999999987665                       247777777787666655432          


Q ss_pred             CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC-CCCccc
Q psy1596         232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG-TTGACA  310 (375)
Q Consensus       232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGa  310 (375)
                               +...|+..+..|.|+..+.+|..         ..+.+|+-.||..+.+.-+.   -+-+|+|-| .++.|.
T Consensus       150 ---------pedAvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~---r~klv~TDg~FSMDGd  208 (417)
T KOG1359|consen  150 ---------PEDAVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKM---RLKLVVTDGVFSMDGD  208 (417)
T ss_pred             ---------hhhhhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhh---eEEEEEecceeccCCC
Confidence                     34568888999999999988765         45667888898877654433   224555554 557799


Q ss_pred             cccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         311 FDNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       311 vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      +.|+++|+.++++||..+.+|.+|+-+.+=.  ......+.-..++|-+.-..-|.++.
T Consensus       209 iaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg  267 (417)
T KOG1359|consen  209 IAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG  267 (417)
T ss_pred             cccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC
Confidence            9999999999999999999999999874311  01122222234689888888888774

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=98.54  E-value=2e-06  Score=86.83  Aligned_cols=109  Identities=16%  Similarity=0.083  Sum_probs=78.2

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC-----------eEEE
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV-----------KMRY  268 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~-----------~v~~  268 (375)
                      ...++|+|++++... +.....                   ++..|++...++..+...++..|.           +++.
T Consensus        96 d~I~it~Ga~~al~~-l~~l~~-------------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  155 (402)
T TIGR03542        96 EEIFISDGAKCDVFR-LQSLFG-------------------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITY  155 (402)
T ss_pred             HHEEECCCcHHHHHH-HHHhcC-------------------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEE
Confidence            457888888888765 222111                   234688899999988888887777           8888


Q ss_pred             EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596         269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      ||.++++.++++. ++   .     ..+.+|+.+.++++||.+   +.+++|+++|++++++|++|.+|+-.
T Consensus       156 v~~~~~~~~~~~~-~~---~-----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~  218 (402)
T TIGR03542       156 LPCTKENNFIPDL-PE---E-----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAF  218 (402)
T ss_pred             eecchhhCCCCCc-cc---c-----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhh
Confidence            9886433333331 11   0     113467777899999998   45889999999999999999999864

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=98.52  E-value=4.6e-06  Score=83.52  Aligned_cols=130  Identities=15%  Similarity=0.074  Sum_probs=100.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++.+|..                    +....++..|+++.+-..+.+.+.                   ++.
T Consensus        60 ~~l~~a~a~~~~~~--------------------~~~~V~~gnGsde~i~~l~~~~~~-------------------~gd  100 (356)
T COG0079          60 RELRAALAEYYGVV--------------------DPENVLVGNGSDELIELLVRAFVE-------------------PGD  100 (356)
T ss_pred             HHHHHHHHHHhCCC--------------------CcceEEEcCChHHHHHHHHHHhhc-------------------CCC
Confidence            67788888888832                    123345566666766555544432                   234


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..+.......++..|.+++.||.++ +++|++++.+++.++      +-+|+.+.++++||..-+.++|.++++.
T Consensus       101 ~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~------~~lv~i~nPNNPTG~~~~~~~l~~l~~~  173 (356)
T COG0079         101 TVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDK------TKLVFLCNPNNPTGTLLPREELRALLEA  173 (356)
T ss_pred             EEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence            788899998888888999999999999988 999999999999873      3388888999999999777777777765


Q ss_pred             c--CCEEEEecccccCcc
Q psy1596         324 E--GLWLHVDAAYAGSSF  339 (375)
Q Consensus       324 ~--~iwlHVDaA~gg~~~  339 (375)
                      .  +.++.||.||.=+.-
T Consensus       174 ~~~~~~vVvDEAY~eF~~  191 (356)
T COG0079         174 LPEGGLVVIDEAYIEFSP  191 (356)
T ss_pred             CCCCcEEEEeCchhhcCC
Confidence            4  889999999977543

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=98.51  E-value=2.6e-06  Score=84.06  Aligned_cols=131  Identities=15%  Similarity=0.017  Sum_probs=94.3

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG  279 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~  279 (375)
                      ...++|+|+++++..++.+. +                      .|++.+.++..+..++.+.|.+++.+|.++++.++.
T Consensus        77 ~~i~it~Ga~~~i~~~~~~~-d----------------------~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  133 (335)
T PRK14808         77 NNVSVGNGADEIIYVMMLMF-D----------------------RSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPE  133 (335)
T ss_pred             ceEEEcCCHHHHHHHHHHHh-C----------------------cEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCCh
Confidence            46889999999988776542 1                      367788999999999999999999999988887664


Q ss_pred             HHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEE
Q psy1596         280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF  359 (375)
Q Consensus       280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~  359 (375)
                      ..    +.       ...+|+.+.++|+||.+-+.+++.+++ ++++||++|.+|.-..-  ..+...+...++ =.+.-
T Consensus       134 ~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~--~~~~~~~~~~~~-vi~~~  198 (335)
T PRK14808        134 VN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHG--ESYVDLLKKYEN-LAVIR  198 (335)
T ss_pred             hH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcC--CchHHHHHhCCC-EEEEE
Confidence            32    11       123777888999999999999999998 58999999999976421  111111222211 13556


Q ss_pred             cCcccCCCC
Q psy1596         360 NPSKWLMVH  368 (375)
Q Consensus       360 d~HK~l~~P  368 (375)
                      ++.|.++.|
T Consensus       199 S~SK~~~l~  207 (335)
T PRK14808        199 TFSKAFSLA  207 (335)
T ss_pred             echhhccCc
Confidence            889987744

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=98.48  E-value=3e-06  Score=83.76  Aligned_cols=131  Identities=14%  Similarity=0.105  Sum_probs=98.2

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCc---hHHHH-HHHHcCCeEEEEecCCCC
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAH---SSVEK-AGLIGLVKMRYIESDDKL  275 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH---~Sv~k-aa~lg~~~v~~Vp~d~~g  275 (375)
                      ..++-+++|..|..+|+.....                   +++.|+.|..-+   +.... ...-.|++++.|..+   
T Consensus        78 ~aa~a~aSG~AA~~~ai~~la~-------------------aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~---  135 (426)
T COG2873          78 VAALAVASGQAAITYAILNLAG-------------------AGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD---  135 (426)
T ss_pred             hhhhhhccchHHHHHHHHHhcc-------------------CCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC---
Confidence            3467788999999888875432                   234555554433   22222 234567889988765   


Q ss_pred             CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCccc
Q psy1596         276 SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYAN  355 (375)
Q Consensus       276 ~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD  355 (375)
                        |++.++++|+++++      +|.+..-.++.+.|-||+.|++||+++++.++||-.++...++-|.    -.   .||
T Consensus       136 --d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~----~h---GAD  200 (426)
T COG2873         136 --DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPI----EH---GAD  200 (426)
T ss_pred             --CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecchh----hc---CCC
Confidence              79999999999876      5666666689999999999999999999999999999998554331    22   379


Q ss_pred             EEEEcCcccCCC
Q psy1596         356 SIAFNPSKWLMV  367 (375)
Q Consensus       356 Si~~d~HK~l~~  367 (375)
                      -|+=|..||++.
T Consensus       201 IVvHS~TK~igG  212 (426)
T COG2873         201 IVVHSATKYIGG  212 (426)
T ss_pred             EEEEeecccccC
Confidence            999999999874

>KOG1360|consensus

Probab=98.46  E-value=3e-06  Score=84.27  Aligned_cols=192  Identities=16%  Similarity=0.106  Sum_probs=132.1

Q ss_pred             cCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC
Q psy1596         121 YKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN  200 (375)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~  200 (375)
                      |-....-|+++..+.+-|.+..     .-.|..+.+.|+...+..+.+.|++|-+-+         .             
T Consensus       181 YLgms~Hp~V~~A~~~tl~~hG-----~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~---------a-------------  233 (570)
T KOG1360|consen  181 YLGMSRHPEVLDAMHDTLDRHG-----AGAGGTRNISGHSKHHVRLEAELADLHQKE---------A-------------  233 (570)
T ss_pred             cccccCChHHHHHHHHHHHHcC-----CCcCCccccCCCCchhhhHHHHHHHHhcCc---------c-------------
Confidence            3333344556666655555532     123455667888888899999999986655         2             


Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHH
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGD  280 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e  280 (375)
                       .++-++.-.||-..|...-.                 ..|+.+||..+..|.|+..+.+-.+..-.....+     |++
T Consensus       234 -ALlFsSCfVANDstLftLak-----------------~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHN-----D~~  290 (570)
T KOG1360|consen  234 -ALLFSSCFVANDSTLFTLAK-----------------KLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHN-----DLD  290 (570)
T ss_pred             -eeeeeeeeeccchHHHHHHH-----------------HCCCcEEeccccchHHHHHHhhhcCCcceeeccC-----CHH
Confidence             23333334444433332211                 1356789999999999999998887765566665     899


Q ss_pred             HHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhh---hhhhcCC-CcccE
Q psy1596         281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEF---RKWLAGV-EYANS  356 (375)
Q Consensus       281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~---~~~~~gi-e~aDS  356 (375)
                      +|++.+++...  ..|.+|......++.|+|-||+||++++++||..-.+|..|+.+.+ -|.-   ... +|+ .+.|.
T Consensus       291 hL~~lL~~~~~--svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlY-G~rGaGvger-dGvm~kvDi  366 (570)
T KOG1360|consen  291 HLEQLLQSSPK--SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLY-GPRGAGVGER-DGVMHKVDI  366 (570)
T ss_pred             HHHHHHHhCCC--CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccc-cCCCCCcccc-CCcchhhhh
Confidence            99999987543  4688899888899999999999999999999999999999887643 1110   001 233 56788


Q ss_pred             EEEcCcccCC
Q psy1596         357 IAFNPSKWLM  366 (375)
Q Consensus       357 i~~d~HK~l~  366 (375)
                      |+=..-|.++
T Consensus       367 IsGTLgKafG  376 (570)
T KOG1360|consen  367 ISGTLGKAFG  376 (570)
T ss_pred             cccchhhhcc
Confidence            8877777543

>KOG1357|consensus

Probab=98.43  E-value=4.4e-07  Score=91.27  Aligned_cols=141  Identities=11%  Similarity=0.051  Sum_probs=105.2

Q ss_pred             CchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccC
Q psy1596         152 NSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSH  231 (375)
Q Consensus       152 d~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~  231 (375)
                      .+....|+.+.++++.+-.++++|.+.                      ..+|..| -..|-+.+-+.            
T Consensus       173 ss~~e~G~~~~hkelE~l~A~f~g~e~----------------------a~vF~mG-f~TNs~~~p~l------------  217 (519)
T KOG1357|consen  173 SSRHEAGTTEEHKELEELVARFLGVED----------------------AIVFSMG-FATNSMNIPSL------------  217 (519)
T ss_pred             ccchhcccHHHHHHHHHHHHHhcCCcc----------------------eEEEecc-ccccccCccee------------
Confidence            345568999999999999999999982                      2344333 22221111111            


Q ss_pred             CcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCC-------ccEEEEEEcC
Q psy1596         232 PELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHL-------IPFFVCGTLG  304 (375)
Q Consensus       232 ~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~-------~p~~Vv~t~G  304 (375)
                             +.++..|+..+..|.|+.-+|++.|+.+|....+     |+..||+.|++....|.       .-++|+.-.-
T Consensus       218 -------~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegi  285 (519)
T KOG1357|consen  218 -------LGKGSLIISDELNHASLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGI  285 (519)
T ss_pred             -------ecCCcceeeccccchheeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccc
Confidence                   1134568888999999999999999999999987     78889999987654432       1234444445


Q ss_pred             CCCccccccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596         305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                      .++.|.++++.++..++++|..+||+|+||.++++
T Consensus       286 ysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~  320 (519)
T KOG1357|consen  286 YSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAM  320 (519)
T ss_pred             eeccCeecccHHHHHhhccccEEEEeecccccccc
Confidence            56889999999999999999999999999999875

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=98.42  E-value=2.9e-06  Score=83.45  Aligned_cols=127  Identities=9%  Similarity=-0.041  Sum_probs=87.9

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHH
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGD  280 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e  280 (375)
                      ..++|+|+++++..++.+                     .++..|++.+.++..+...++..|.+++.||.+        
T Consensus        66 ~I~it~Gs~~al~~~~~~---------------------~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~--------  116 (330)
T PRK05664         66 QLLPVAGSQAAIQALPRL---------------------RAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA--------  116 (330)
T ss_pred             CEEECcCHHHHHHHHHHc---------------------cCCCEEEEcCCChHHHHHHHHHcCCeEEEechh--------
Confidence            378899999987654321                     124578899999999999999888899988863        


Q ss_pred             HHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCccc--
Q psy1596         281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYAN--  355 (375)
Q Consensus       281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD--  355 (375)
                      ++++++++       +.+++.+.++++||.+   +.+++|+++|+++++|+++|.+|....-. +...    .+..-|  
T Consensus       117 ~~~~~~~~-------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~-~s~~----~~~~~~~v  184 (330)
T PRK05664        117 EVEAALDS-------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ-HSLA----ACAHRPGL  184 (330)
T ss_pred             hHhhhhcC-------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc-cccc----ccccCCCE
Confidence            35555531       2256777899999988   45777777889999999999999654210 1111    111112  


Q ss_pred             EEEEcCcccCCCC
Q psy1596         356 SIAFNPSKWLMVH  368 (375)
Q Consensus       356 Si~~d~HK~l~~P  368 (375)
                      .+.-++.|.++.|
T Consensus       185 i~~~SfSK~~gl~  197 (330)
T PRK05664        185 IVLRSFGKFFGLA  197 (330)
T ss_pred             EEEeeccccccCC
Confidence            4677889988644

>KOG2862|consensus

Probab=98.40  E-value=6.2e-06  Score=79.83  Aligned_cols=123  Identities=16%  Similarity=0.097  Sum_probs=92.3

Q ss_pred             CceEEEecCCCchHHHHH--HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-HHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKA--GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-LEEL  317 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~ka--a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-l~eI  317 (375)
                      |++.+++-...-.+-.-+  ++--|.++..|+.+-......+.+++.+++.     .|.+|++|.|.|.||..+| ++.+
T Consensus        91 Pgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh-----~p~~vfv~hgdsSTgV~q~~~~~~  165 (385)
T KOG2862|consen   91 PGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQH-----KPKAVFVTHGDSSTGVLQDLLAIS  165 (385)
T ss_pred             CCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhc-----CCceEEEEecCccccccchHHHHH
Confidence            344454444443433332  2334678888888877789999999999875     3779999999999999988 7778


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .++|++|+..|.||+.-..+..   ++...-.|   +|..-.-..|-+++|.|.|++
T Consensus       166 g~lc~k~~~lllVD~VaSlggt---~F~mDewg---VDvaytgSQKaL~aP~GLsii  216 (385)
T KOG2862|consen  166 GELCHKHEALLLVDTVASLGGT---EFEMDEWG---VDVAYTGSQKALGAPAGLSII  216 (385)
T ss_pred             HHHhhcCCeEEEEechhhcCCc---cceehhhc---ccEEEecchhhcCCCCCccee
Confidence            8999999999999997666543   22222234   499999999999999998874

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.38  E-value=9.6e-06  Score=82.71  Aligned_cols=158  Identities=16%  Similarity=0.060  Sum_probs=88.3

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~  268 (375)
                      ...|+++|||||-.|+..||.....+ +.  .       .++.+|.....-|-...-+..+.+.            .+..
T Consensus       104 ~v~f~~sGseA~e~A~klar~~~~~~-~~--~-------~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~  173 (423)
T PRK05964        104 HVFFSDSGSVAVEVALKMALQYWRNR-GE--P-------GRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVT  173 (423)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEE
Confidence            47999999999999999999753221 00  0       0122444444445433333332211            1233


Q ss_pred             EecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccc
Q psy1596         269 IESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFIC  341 (375)
Q Consensus       269 Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~  341 (375)
                      +|..  +....+.++|++.|++..   ..+.+|++.- .....|.+    +.+++|.++|++||+.+++|.++.+....-
T Consensus       174 ~~~~~~d~~~~~~~~l~~~l~~~~---~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G  250 (423)
T PRK05964        174 APFPPDGYEQATLDALEALLEKHA---GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG  250 (423)
T ss_pred             eCCCcchhHHHHHHHHHHHHHhCC---CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc
Confidence            3332  111223788888886432   1233444432 13334433    559999999999999999999997643211


Q ss_pred             hhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         342 PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       342 ~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      .-+.....++ ..|.++++  |+++.. ++.|++
T Consensus       251 ~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av  281 (423)
T PRK05964        251 TLFACEQAGV-SPDIMCLS--KGLTGGYLPLAAT  281 (423)
T ss_pred             chhHHHhcCC-CCCeeeee--hhhhcCcccceEE
Confidence            1111112344 46877765  998665 355543

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=98.37  E-value=1.6e-05  Score=81.26  Aligned_cols=172  Identities=12%  Similarity=-0.007  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      +.+.++.+.|++++. +                    .....+|+++||+||..|+..||...                .
T Consensus        86 ~~~~~la~~L~~~~~-~--------------------~~~~v~f~~SGseA~e~AlklAr~~t----------------g  128 (433)
T PRK08117         86 ESILKLAEELAEITP-G--------------------GLDCFFFSNSGAEAIEGALKLAKHVT----------------K  128 (433)
T ss_pred             HHHHHHHHHHHHhCC-C--------------------CCCEEEEeCcHHHHHHHHHHHHHHhc----------------C
Confidence            334778888888762 1                    11247899999999999999998742                0


Q ss_pred             CceEEEecCCCchHHHHHHHHcC-------------CeEEEEecCCCCC------------cCHHHHHHHHHHhhhcCCc
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDDKLS------------LRGDKLIEAIERDKKKHLI  295 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~~g~------------md~e~Le~aI~~~~~~g~~  295 (375)
                      ++.+|.....-|-+..-++.+.+             ..+..+|..+.++            -|.++|++.+++... +..
T Consensus       129 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~  207 (433)
T PRK08117        129 RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVT-PEE  207 (433)
T ss_pred             CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccC-CCc
Confidence            12355566666766655543221             1233444322221            156677777764211 123


Q ss_pred             cEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596         296 PFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       296 p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                      +.+|++.--..+.|.+-+    +++|.++|++||+.+++|.+|+|....-.-+.....++ ..|.  +.+-|.++.-+..
T Consensus       208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi--~t~sK~lg~G~pi  284 (433)
T PRK08117        208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDI--MTIAKGIASGLPL  284 (433)
T ss_pred             EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCE--eehhhhccCCCcc
Confidence            445555544455677766    99999999999999999999997432111110011233 2464  4667887643444


Q ss_pred             ee
Q psy1596         372 TA  373 (375)
Q Consensus       372 g~  373 (375)
                      |+
T Consensus       285 ga  286 (433)
T PRK08117        285 SA  286 (433)
T ss_pred             ee
Confidence            44

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=98.34  E-value=4.5e-05  Score=77.97  Aligned_cols=153  Identities=15%  Similarity=0.095  Sum_probs=87.6

Q ss_pred             EEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596         202 ITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY  268 (375)
Q Consensus       202 Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~  268 (375)
                      ..|+ ++|||||-.|+..||... .               ++.+|.....-|-...-++.+.+            ..+..
T Consensus       105 ~~f~~~sGseA~e~AlklAr~~t-g---------------r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~  168 (425)
T PRK09264        105 VQFTGPTGTNAVEAALKLARKVT-G---------------RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTR  168 (425)
T ss_pred             EEEeCCCHHHHHHHHHHHHHHhc-C---------------CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEE
Confidence            4564 799999999999999752 0               12233344444543333332211            13455


Q ss_pred             EecCCCC--C-cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccc
Q psy1596         269 IESDDKL--S-LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFIC  341 (375)
Q Consensus       269 Vp~d~~g--~-md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~  341 (375)
                      +|.....  . -|+++|++.+++.......+.+|++.--....|.+    +.+++|.++|++||+++++|.++.|....-
T Consensus       169 ~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG  248 (425)
T PRK09264        169 MPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG  248 (425)
T ss_pred             eCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc
Confidence            5543211  1 26788898886532111124455555433444543    579999999999999999999998753222


Q ss_pred             hhhhhhhcCCCcccEEEEcCcccCCC-CCccee
Q psy1596         342 PEFRKWLAGVEYANSIAFNPSKWLMV-HFDCTA  373 (375)
Q Consensus       342 ~~~~~~~~gie~aDSi~~d~HK~l~~-P~~~g~  373 (375)
                      ..+.....++ ..|.++++  |.++. -+.+|+
T Consensus       249 ~~~~~~~~~v-~PDi~t~~--K~l~~~G~piga  278 (425)
T PRK09264        249 TFFSFERAGI-TPDIVTLS--KSISGYGLPMAL  278 (425)
T ss_pred             HHHHHhhcCC-CCCEEEec--cccCCCccceEE
Confidence            1111112344 46888775  97653 333444

>PRK12403 putative aminotransferase; Provisional

Probab=98.34  E-value=2.4e-05  Score=80.90  Aligned_cols=171  Identities=14%  Similarity=0.027  Sum_probs=100.2

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ....+.++.+.|+++++-+                     -...+|+++||+||-.|+..||...... +.         
T Consensus        96 ~~~~~~~lae~L~~~~p~~---------------------~~~v~f~~SGseA~e~AiklAr~~~~~~-g~---------  144 (460)
T PRK12403         96 THPAVIELSELLFSLLPGH---------------------YSHAIYTNSGSEANEVLIRTVRRYWQVL-GK---------  144 (460)
T ss_pred             CCHHHHHHHHHHHHhCCCC---------------------cCEEEEeCCcHHHHHHHHHHHHHHHHhh-CC---------
Confidence            3444577888888887522                     1247999999999999999999753211 00         


Q ss_pred             hcCceEEEe-cCCCchHHHHHHHHcCCe-----------EEEEecCCCC----Cc--------CHHHHHHHHHHhhhcCC
Q psy1596         239 INSRLVAYC-SDQAHSSVEKAGLIGLVK-----------MRYIESDDKL----SL--------RGDKLIEAIERDKKKHL  294 (375)
Q Consensus       239 ~~~~~vV~~-S~~aH~Sv~kaa~lg~~~-----------v~~Vp~d~~g----~m--------d~e~Le~aI~~~~~~g~  294 (375)
                       ..+.+|++ ...-|-+..-++.+.+..           +..+|....+    .+        +.+.|++.+.+...  .
T Consensus       145 -~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~--~  221 (460)
T PRK12403        145 -PQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGA--E  221 (460)
T ss_pred             -CCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCC--C
Confidence             01223332 333477766665554322           2333321100    01        13556666643211  1


Q ss_pred             ccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         295 IPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       295 ~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      .+.+|++.--....|.+-+    +++|.++|++||+.|++|.+++|......-+.....|++ .|-++  .-|.++
T Consensus       222 ~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~-PDiv~--~gK~lg  294 (460)
T PRK12403        222 NVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFE-PDTLS--IAKGLT  294 (460)
T ss_pred             ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCC-CCeEE--Eccccc
Confidence            2445555444445566666    999999999999999999999876443322222223563 68887  578766

>KOG0258|consensus

Probab=98.33  E-value=7.2e-06  Score=81.40  Aligned_cols=143  Identities=17%  Similarity=0.168  Sum_probs=103.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..-+++.|.+.+.+-=|.|.                   ++....+|+|+|.|...-|......              
T Consensus       113 qGv~~vR~~VA~~I~rRDG~p~-------------------~p~dI~LT~GAS~ai~~il~l~~~~--------------  159 (475)
T KOG0258|consen  113 QGVPGVRKHVAEFIERRDGIPA-------------------DPEDIFLTTGASPAIRSILSLLIAG--------------  159 (475)
T ss_pred             cCChhHHHHHHHHHHhccCCCC-------------------CHHHeeecCCCcHHHHHHHHHHhcC--------------
Confidence            3444556778888888777663                   5667899999999977666554331              


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH-HcCCe-EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVK-MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~-v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++.-|+++-.-+.-....+. +++.. ...+.-..+|.+|+++|++.+++.+ ++..|.++|+.-+-++||.+   
T Consensus       160 ----~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~  234 (475)
T KOG0258|consen  160 ----KKTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSE  234 (475)
T ss_pred             ----CCCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcH
Confidence                23346665544433333333 44433 2344445689999999999999887 78888888888888999988   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      ..|++|..+|.++++.|..|..|=-.
T Consensus       235 e~ie~i~~fa~~~~l~llaDEVYQ~N  260 (475)
T KOG0258|consen  235 ENIEGIICFAAEEGLVLLADEVYQDN  260 (475)
T ss_pred             HHHHHHHHHHHHcCeEEechHHHHhh
Confidence            78999999999999999999987544

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=98.33  E-value=5.9e-06  Score=81.76  Aligned_cols=145  Identities=11%  Similarity=-0.066  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+++++.+|++                    ++...++|+|+++++.. +..+..                   ++.
T Consensus        56 ~~L~~~ia~~~~~~--------------------~~~~I~i~~Gs~e~i~~-l~~~~~-------------------~g~   95 (339)
T PRK06959         56 DGLAACAARYYGAP--------------------DAAHVLPVAGSQAAIRA-LPALLP-------------------RGR   95 (339)
T ss_pred             HHHHHHHHHHhCCC--------------------CcccEEECcCHHHHHHH-HHHhcC-------------------CCe
Confidence            57889999999997                    33467888888888653 221111                   223


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~i  320 (375)
                       |++.+.++..+..+++..|.+++.||.++      +.+.+    .      ..+++.+.++|+||.+-+   +.+|++.
T Consensus        96 -v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~~~~----~------~~~v~l~nPnNPTG~~~s~~~l~~l~~~  158 (339)
T PRK06959         96 -VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DTLPA----A------LTHLIVVNPNNPTAERLPAARLLRWHAQ  158 (339)
T ss_pred             -EEEcCCCcHHHHHHHHHCCCEEEeecccc------hhccc----c------CCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence             56688898888888888888888888753      22211    1      125777789999999855   4455555


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      |++++.|+++|.+|.-.... +...... .-+. =.+.-++.|.++.|
T Consensus       159 ~~~~~~~vI~DEay~~~~~~-~s~~~~~-~~~~-vi~l~SfSK~~gl~  203 (339)
T PRK06959        159 LAARGGTLIVDEAFADTLPA-ASLAAHT-DRPG-LVVLRSVGKFFGLA  203 (339)
T ss_pred             HHHcCCEEEEECCCccCCCc-ccchhcc-CCCC-EEEEecChhhcCCc
Confidence            67889999999999875321 2111111 1111 13566889987644

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=98.33  E-value=2.9e-05  Score=81.21  Aligned_cols=152  Identities=11%  Similarity=0.007  Sum_probs=90.8

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCe------------EEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVK------------MRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~------------v~~  268 (375)
                      ...|+++||+||-.|+.+||.+.... +.  +       .++.+|.....-|-+..-++.+.+..            +..
T Consensus       153 ~v~f~~SGsEA~e~AlKlAr~~~~~~-g~--~-------~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~  222 (504)
T PLN02760        153 KVFFTNSGSEANDTQVKLVWYYNNAL-GR--P-------NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLH  222 (504)
T ss_pred             EEEEeCChHHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEE
Confidence            47899999999999999998753110 00  0       02346667777787766665544321            222


Q ss_pred             EecCCCCC-------------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596         269 IESDDKLS-------------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD  331 (375)
Q Consensus       269 Vp~d~~g~-------------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD  331 (375)
                      ++....++             ...++|++.|.+..  +..+.+|++.--....|.+-|    +++|.++|++||+.|++|
T Consensus       223 ~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~D  300 (504)
T PLN02760        223 TDCPHYWRFHLPGETEEEFSTRLADNLENLILKEG--PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIAD  300 (504)
T ss_pred             eCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEec
Confidence            33211111             11245777765321  123445554443345577777    999999999999999999


Q ss_pred             cccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      .++.|.....+-+.....|+ ..|.+++  -|.++.
T Consensus       301 EV~TGfGRtG~~~a~e~~gv-~PDivtl--gK~lgg  333 (504)
T PLN02760        301 EVICAFGRLGTMFGCDKYNI-KPDLVSL--AKALSS  333 (504)
T ss_pred             chhhCCcccchhhHHHhcCC-CCcEEEe--cccccC
Confidence            99966544333222223466 3787666  677653

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=98.29  E-value=4.8e-05  Score=78.28  Aligned_cols=172  Identities=11%  Similarity=-0.008  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++.+.|.+++.-+                    ......|+.+|||||-.|+..||... .               ++
T Consensus        99 ~~~lAe~L~~~~p~~--------------------~~~~v~f~~SGsEA~e~AlklAr~~t-g---------------r~  142 (441)
T PRK05769         99 AVELAERLVEIAPGG--------------------FEKKVFFTNSGTESNEAAIKIARYHT-G---------------RK  142 (441)
T ss_pred             HHHHHHHHHHhCCCC--------------------CCCEEEECCchHHHHHHHHHHHHHHh-C---------------CC
Confidence            367778888776321                    11257899999999999999999752 0               12


Q ss_pred             eEEEecCCCchHHHHHHHHcC-------------CeEEEEecCCCCC-----cC--------HHHHHHHHHHhhhcCCcc
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDDKLS-----LR--------GDKLIEAIERDKKKHLIP  296 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~~g~-----md--------~e~Le~aI~~~~~~g~~p  296 (375)
                      .+|.....-|-...-++.+.+             ..+..+|..+..+     -|        .+.|++.+.+....+..+
T Consensus       143 ~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~i  222 (441)
T PRK05769        143 YIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEV  222 (441)
T ss_pred             eEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCce
Confidence            234444444544433333321             1233444321111     11        233555332211112234


Q ss_pred             EEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         297 FFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       297 ~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      .+|++.--....|.+-|    +++|.++|++||+.+++|.++.|....-.-+.....|+ ..|-++++  |.++.-++.|
T Consensus       223 aavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~g  299 (441)
T PRK05769        223 AAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGLPLG  299 (441)
T ss_pred             EEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEEc--ccccCCcccE
Confidence            45555544445677767    99999999999999999999987432211111111244 35888764  7666444455


Q ss_pred             e
Q psy1596         373 A  373 (375)
Q Consensus       373 ~  373 (375)
                      +
T Consensus       300 a  300 (441)
T PRK05769        300 A  300 (441)
T ss_pred             E
Confidence            4

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=98.27  E-value=5.1e-05  Score=77.67  Aligned_cols=145  Identities=12%  Similarity=0.013  Sum_probs=89.8

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC----------------
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV----------------  264 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~----------------  264 (375)
                      ...|+++|||||-.|+..||....                ++.+|.....-|-...-++.+.+.                
T Consensus       111 ~v~f~~sGseA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~  174 (428)
T PRK12389        111 KVRFVNSGTEAVMTTIRVARAYTG----------------RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKS  174 (428)
T ss_pred             EEEEeCCHHHHHHHHHHHHHHhhC----------------CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCc
Confidence            478999999999999999997521                122444444455443333333221                


Q ss_pred             ---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccC
Q psy1596         265 ---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       265 ---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                         .+..+|.+     |+++|++.+++..   ..+.+|+..---...|.+-|    +++|.++|++||+.+++|.++.|+
T Consensus       175 ~~~~~~~~~~~-----d~~~l~~~l~~~~---~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~  246 (428)
T PRK12389        175 IAQEVITVPFN-----DIEALKEALDKWG---DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF  246 (428)
T ss_pred             ccCceEEcCCC-----CHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence               12222221     7899999987432   22455665544455677777    999999999999999999999886


Q ss_pred             cccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         338 SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       338 ~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                       ...........|+ ..|-+++  -|.++.-++.|+
T Consensus       247 -Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~a  278 (428)
T PRK12389        247 -RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGA  278 (428)
T ss_pred             -ccCcchhhHHhCC-CCCeeee--chhhcCCCceeE
Confidence             3321111112355 4787655  676654344443

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.27  E-value=1.4e-05  Score=88.23  Aligned_cols=154  Identities=10%  Similarity=0.042  Sum_probs=99.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|+.+.--+...++++|.|++.                     ...-+..++|.+.= |+..++... .           
T Consensus       105 QG~Le~l~e~Qt~i~eLtGm~~---------------------aNaSl~d~atA~aE-a~~~a~~~~-~-----------  150 (939)
T TIGR00461       105 QGRLEALLNFQTVVSDLTGLPV---------------------ANASLLDEGTAAAE-AMALSFNVS-K-----------  150 (939)
T ss_pred             hHHHHHHHHHHHHHHHHHCCCh---------------------hhhhccchhhHHHH-HHHHHHHhh-c-----------
Confidence            5555555788899999999993                     12345555565432 333232110 0           


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                         .++..|++++..|......++    ..|.+++.++        +++|++.+  +      .+.|+++.+ +..|.+.
T Consensus       151 ---~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~--~------~~~v~~q~P-n~~G~ie  210 (939)
T TIGR00461       151 ---KKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV--D------VFGCLLQYP-ATDGSIL  210 (939)
T ss_pred             ---CCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC--C------EEEEEEECC-CCCeEEe
Confidence               012469999999988776543    4567777763        34565554  2      346777776 5689999


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCccc-chhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      |+++|++++++.|.++.+++=.-+..++ .|.  .  -   .||.+ +..||-+++|.+-|
T Consensus       211 d~~~i~~~~h~~gal~~~~ad~~al~ll~~Pg--e--~---GaDi~-vg~~q~fg~p~g~G  263 (939)
T TIGR00461       211 DYKQLIDALHSHKSLVSVAADLMALTLLTPPG--H--Y---GADIV-LGSSQRFGVPMGYG  263 (939)
T ss_pred             cHHHHHHHHHHcCCEEEEEechHHhCCcCCHH--H--c---CCcEE-eeCCCccCCCCCCC
Confidence            9999999999999999996543333222 221  1  1   47988 77777778887765

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>KOG0053|consensus

Probab=98.24  E-value=1.8e-05  Score=79.78  Aligned_cols=144  Identities=11%  Similarity=0.076  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.++++-|.+                       ..+..++|..|...++.....                   .+.
T Consensus        80 ~~le~~iaal~ga~-----------------------~~l~fsSGmaA~~~al~~L~~-------------------~g~  117 (409)
T KOG0053|consen   80 DVLESGIAALEGAA-----------------------HALLFSSGMAAITVALLHLLP-------------------AGD  117 (409)
T ss_pred             HHHHHHHHHHhCCc-----------------------eEEEecccHHHHHHHHHHhcC-------------------CCC
Confidence            56777788887665                       367788888788777765442                   233


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++....+.-..+-+    ...|+....+.++     |++.+++++++.      ..+|..-.++++++.+-||++|++
T Consensus       118 ~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-----~~~~~~~~i~~~------t~~V~~ESPsNPll~v~DI~~l~~  186 (409)
T KOG0053|consen  118 HIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-----DLKKILKAIKEN------TKAVFLESPSNPLLKVPDIEKLAR  186 (409)
T ss_pred             cEEEeCCCcccHHHHHHHHHHHhCceeeeechh-----hHHHHHHhhccC------ceEEEEECCCCCccccccHHHHHH
Confidence            5666655554444333    2345566666654     677888888774      348999999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCc-ccEEEEcCcccCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEY-ANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~-aDSi~~d~HK~l~~P  368 (375)
                      +|+++|+.+.||..++.+...-        .+.. ||-++=|..||++.-
T Consensus       187 la~~~g~~vvVDnTf~~p~~~~--------pL~lGADIV~hSaTKyi~Gh  228 (409)
T KOG0053|consen  187 LAHKYGFLVVVDNTFGSPYNQD--------PLPLGADIVVHSATKYIGGH  228 (409)
T ss_pred             HHhhCCCEEEEeCCcCcccccC--------hhhcCCCEEEEeeeeeecCC
Confidence            9999999999999999984322        2333 899999999998754

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=98.23  E-value=3.9e-05  Score=78.04  Aligned_cols=145  Identities=14%  Similarity=-0.006  Sum_probs=83.2

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHH--cCC--------------
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLI--GLV--------------  264 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~l--g~~--------------  264 (375)
                      ..+|+.|||+|+..|+..||... .               ++.+|.....-|-...-...+  .+.              
T Consensus       106 ~v~~~~sGseA~e~Alk~ar~~~-g---------------r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (423)
T TIGR00713       106 MVRFVNSGTEATMSAVRLARGYT-G---------------RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPED  169 (423)
T ss_pred             EEEEeCCHHHHHHHHHHHHHHhh-C---------------CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcc
Confidence            47999999999999999998752 0               122333333344332222211  000              


Q ss_pred             ---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccC
Q psy1596         265 ---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       265 ---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                         .+..+|.     -|+++|+++|++..   ..+.+|+..---.++|.+-+    +++|.++|++||+++++|.+|.+.
T Consensus       170 ~~~~~~~~~~-----~d~~~l~~~i~~~~---~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~  241 (423)
T TIGR00713       170 FAKLTLVLPY-----NDLEALEEVFEEYG---EEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF  241 (423)
T ss_pred             cccceEEeCC-----CCHHHHHHHHHHcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccc
Confidence               1222221     28999999997421   12345555422223687754    899999999999999999999775


Q ss_pred             cccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         338 SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       338 ~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                       ..-........++ ..|.+  .+-|.+..-+..|+
T Consensus       242 -r~g~~~~~~~~~~-~pDi~--t~sK~l~~G~pig~  273 (423)
T TIGR00713       242 -RVALGGAQEYFGV-EPDLT--TLGKIIGGGLPVGA  273 (423)
T ss_pred             -ccCcchhHHHhCC-Ccchh--hhhhhhcCCCceee
Confidence             3211111112233 24643  46787763333343

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=98.23  E-value=9e-05  Score=75.52  Aligned_cols=154  Identities=15%  Similarity=0.081  Sum_probs=88.0

Q ss_pred             EEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596         202 ITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY  268 (375)
Q Consensus       202 Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~  268 (375)
                      ..|+ ++|||||-.|+..||... .               ++.+|-....-|-...-+..+.+            ..+..
T Consensus       101 ~~f~~~sGseA~e~AlklAr~~t-g---------------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~  164 (412)
T TIGR02407       101 VQFPGPTGTNAVESALKLARKVT-G---------------RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSR  164 (412)
T ss_pred             EEEeCCCchHHHHHHHHHHhhhc-C---------------CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEE
Confidence            4564 899999999999999742 0               12234444444544433333221            12344


Q ss_pred             EecCCCCC---cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc----cccHHHHHHHHHhcCCEEEEecccccCcccc
Q psy1596         269 IESDDKLS---LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA----FDNLEELGPICEKEGLWLHVDAAYAGSSFIC  341 (375)
Q Consensus       269 Vp~d~~g~---md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa----vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~  341 (375)
                      +|..+...   -+++.|++.+++.......+.+|++.---...|.    -+-+++|.++|++||++|++|..+.|....-
T Consensus       165 ~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG  244 (412)
T TIGR02407       165 MPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG  244 (412)
T ss_pred             CCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence            55422111   2467788888643211112345554433334454    3669999999999999999999998654322


Q ss_pred             hhhhhhhcCCCcccEEEEcCcccCCC-CCcceee
Q psy1596         342 PEFRKWLAGVEYANSIAFNPSKWLMV-HFDCTAM  374 (375)
Q Consensus       342 ~~~~~~~~gie~aDSi~~d~HK~l~~-P~~~g~l  374 (375)
                      ..+.....++ ..|-++++  |+++. -+..|++
T Consensus       245 ~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav  275 (412)
T TIGR02407       245 TFFSFEPAGI-EPDIVCLS--KSISGYGLPLALT  275 (412)
T ss_pred             hhHHhcccCC-CCCEEEec--hhccCCccceeEE
Confidence            2222222345 46877765  99764 4445554

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=98.22  E-value=7.7e-05  Score=76.83  Aligned_cols=146  Identities=14%  Similarity=0.036  Sum_probs=89.8

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~  268 (375)
                      ...|+.+|||||-.|+..||.....+             .+..+|.....-|-...-+..+.+.            .++.
T Consensus       136 ~v~f~~SGsEA~e~AlklAr~~t~~~-------------gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~  202 (442)
T TIGR03372       136 YSFFCNSGTESVEAALKLAKAYQSPR-------------GKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHH  202 (442)
T ss_pred             EEEEeCCchHHHHHHHHHHHHHHhhc-------------CCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEE
Confidence            47899999999999999999753210             0112344444445444333333221            2334


Q ss_pred             EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhh
Q psy1596         269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEF  344 (375)
Q Consensus       269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~  344 (375)
                      +|.+     |.+.+++.+++....+....+|++.-.....|.+-|    +++|.++|++||+.+++|.++.|....-.-+
T Consensus       203 ~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~  277 (442)
T TIGR03372       203 VAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMF  277 (442)
T ss_pred             eCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccch
Confidence            4432     678888888654333334556665554455677766    9999999999999999999997643222111


Q ss_pred             hhhhcCCCcccEEEEcCcccCCC
Q psy1596         345 RKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       345 ~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      .....|+ ..|.++  .-|.++.
T Consensus       278 a~e~~gv-~PDivt--~gK~lg~  297 (442)
T TIGR03372       278 ACEHEGV-QPDILC--LAKALGG  297 (442)
T ss_pred             hhhhcCC-CCCeee--ehhhhcC
Confidence            1122355 478776  5787763

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=98.20  E-value=4.5e-05  Score=78.00  Aligned_cols=115  Identities=13%  Similarity=0.053  Sum_probs=74.0

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEE-
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMR-  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~-  267 (375)
                      ...|+.|||+||..|+..+|... .               ++.+|.....-|-...-+..+.+            ...+ 
T Consensus       108 ~v~~~~sGseA~e~Aik~a~~~~-g---------------~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~  171 (426)
T PRK00062        108 MVRMVNSGTEATMSAIRLARGYT-G---------------RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPED  171 (426)
T ss_pred             EEEEecCHHHHHHHHHHHHHHHh-C---------------CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcc
Confidence            47899999999999999998742 0               12244455555654322222110            0000 


Q ss_pred             ----EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccC
Q psy1596         268 ----YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       268 ----~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                          .+.. +.  -|+++|++.+++..   ....+|++.-...+.|.+-+    +++|.++|++||+++++|.+|.|.
T Consensus       172 ~~~~~~~~-~~--~d~~~l~~~i~~~~---~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~  243 (426)
T PRK00062        172 FAKHTLTA-PY--NDLEAVEELFEEYG---DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF  243 (426)
T ss_pred             cccceEEc-CC--CCHHHHHHHHHhCC---CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc
Confidence                0111 11  27899999987532   12445666644556788866    999999999999999999999865

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=98.19  E-value=6.5e-05  Score=77.70  Aligned_cols=145  Identities=14%  Similarity=0.045  Sum_probs=89.1

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecC-CCchHHHHHHHHcCC------------eEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSD-QAHSSVEKAGLIGLV------------KMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~-~aH~Sv~kaa~lg~~------------~v~  267 (375)
                      ...|+.+|||||-.|+..||.....+              .+..|++.+ .-|-...-++.+.+.            .+.
T Consensus       143 ~v~f~~SGsEAve~AlklAr~~t~~~--------------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~  208 (459)
T PRK11522        143 YSFFCNSGTESVEAALKLAKAYQSPR--------------GKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFR  208 (459)
T ss_pred             EEEEeCCchHHHHHHHHHHHHHhccC--------------CCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCc
Confidence            47899999999999999999753110              022344443 344333333333221            122


Q ss_pred             EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchh
Q psy1596         268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPE  343 (375)
Q Consensus       268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~  343 (375)
                      .+|.+     |.++|++++++....+..+.+|++.-.....|.+-|    ++++.++|++||+.+++|.++.|....-.-
T Consensus       209 ~~~~~-----d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~  283 (459)
T PRK11522        209 HVPFG-----NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKM  283 (459)
T ss_pred             ccCCC-----CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchh
Confidence            23321     678999999764333334556666655556677766    999999999999999999999764322211


Q ss_pred             hhhhhcCCCcccEEEEcCcccCCC
Q psy1596         344 FRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       344 ~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      +.....|+ ..|-+++  -|.++.
T Consensus       284 ~a~e~~gv-~PDivt~--gK~lgg  304 (459)
T PRK11522        284 FACEHENV-QPDILCL--AKALGG  304 (459)
T ss_pred             hhhhccCC-CCCEEEe--chhhhC
Confidence            11112355 4687755  687764

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=98.18  E-value=3.9e-05  Score=77.05  Aligned_cols=156  Identities=13%  Similarity=0.026  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|++++|++                       ..+|+++||+|+-.|+.+||....                ++.
T Consensus        69 ~~la~~l~~~~~~~-----------------------~v~~~~SGseA~e~Alklar~~~g----------------r~~  109 (364)
T PRK04013         69 EEMLEELSKWVNYE-----------------------YVYMGNSGTEAVEAALKFARLYTG----------------RKE  109 (364)
T ss_pred             HHHHHHHHhhcCCC-----------------------EEEEeCchHHHHHHHHHHHHHHhC----------------CCE
Confidence            56677777776654                       379999999999999999987520                122


Q ss_pred             EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                      +|..+..-|-+..-+..+.+            ..+..+|.+     |++++++.+.+.      +.+|++.--....|.+
T Consensus       110 Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~i~~~------~aAvivEpi~g~gG~~  178 (364)
T PRK04013        110 IIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN-----DVEAAKEAITKE------TAAVIFEPIQGEGGIV  178 (364)
T ss_pred             EEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC-----CHHHHHHHhcCC------cEEEEEcCCcCCCCCc
Confidence            44444444544333333211            112333322     678888888532      3355554433333443


Q ss_pred             -cc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         312 -DN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       312 -Dp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                       -|   +++|.++|++||+.++.|.++.|. ..-.-+.....++ ..|.+++  -|.++.-++.|+
T Consensus       179 ~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a  240 (364)
T PRK04013        179 PAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSL  240 (364)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCC-CCCEEEe--cccccCCceeEE
Confidence             23   999999999999999999999875 3322222222355 4787777  666544344443

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=98.17  E-value=0.00014  Score=72.24  Aligned_cols=175  Identities=16%  Similarity=0.090  Sum_probs=101.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.++|.++++-.                     .....|+.+||+||-.|+..||.+...+...          .++.
T Consensus        62 ~~la~~L~~~~p~~---------------------~~~v~f~~sGseAve~Alkla~~~~~~~~~~----------~r~~  110 (339)
T PF00202_consen   62 AELAEKLAELFPGG---------------------LDRVFFANSGSEAVEAALKLARQYHNKRAYT----------GRRK  110 (339)
T ss_dssp             HHHHHHHHHHSSTT---------------------EEEEEEESSHHHHHHHHHHHHHHHHHHTHHH----------TTTE
T ss_pred             hhhhhhhhhccccc---------------------cceeeeccCchHHHHHHHHHhhccccccccc----------CCce
Confidence            68888999988322                     1357999999999999999999432211110          1122


Q ss_pred             EEEecCCCchHHHHHHHHc------------CCeEEEEecCCCCC-----cCHHHHHHHHHHhhhcCCccEEEEEEcCCC
Q psy1596         244 VAYCSDQAHSSVEKAGLIG------------LVKMRYIESDDKLS-----LRGDKLIEAIERDKKKHLIPFFVCGTLGTT  306 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg------------~~~v~~Vp~d~~g~-----md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT  306 (375)
                      ++-....-|-...-+..+.            ...+..+|..+...     -..+.+++.+.+....  ...+|++.-...
T Consensus       111 il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~iaavivEPi~g  188 (339)
T PF00202_consen  111 ILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNAD--EIAAVIVEPIQG  188 (339)
T ss_dssp             EEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGG--GEEEEEEESSBT
T ss_pred             EEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCC--cEEEEEEecccc
Confidence            3444444454333333321            12457777642111     0112244444432221  234555555444


Q ss_pred             Ccccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         307 GACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       307 ~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ..|.+    +=+++|.++|++||+.+++|..+.|.....+-+.....|+ ..|.+++.  |.+..-++.|++
T Consensus       189 ~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav  257 (339)
T PF00202_consen  189 EGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAV  257 (339)
T ss_dssp             TTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEE
T ss_pred             ccCccccccchhhehcccccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccc
Confidence            55654    3489999999999999999999998654333222223455 57999997  776655666554

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.12  E-value=5e-05  Score=76.38  Aligned_cols=160  Identities=17%  Similarity=0.121  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHcC-CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENA-TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG-~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      .++.++|+++.+ .+                       ..+|+.||||||=.|+..||.+...      +       .+.
T Consensus        87 ~~la~~L~~~s~~~d-----------------------~vff~NSGaEA~EaAiKlARk~~~~------~-------~k~  130 (404)
T COG4992          87 AELAEKLVELSPFAD-----------------------RVFFCNSGAEANEAALKLARKYTGD------P-------EKS  130 (404)
T ss_pred             HHHHHHHHhhCcccc-----------------------EEEEcCCcHHHHHHHHHHHHHHcCC------C-------CCc
Confidence            788888888876 33                       4789999999999999999986420      0       011


Q ss_pred             eEEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                      -+|.+...=|--..-++.+++            ..++.||-+     |+++|+++|++++.      +|++-----+.|.
T Consensus       131 ~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~~~ta------AvivEPIQGEgGV  199 (404)
T COG4992         131 KIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAAIDEDTA------AVIVEPIQGEGGV  199 (404)
T ss_pred             EEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-----CHHHHHHHhccCeE------EEEEecccCCCCC
Confidence            234444444422222221111            135566654     89999999998643      5555543345555


Q ss_pred             c----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         311 F----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       311 v----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +    +=++++.++|++||+.++.|..+.|....-.-+.....|+ ..|-+++  -|.|+.-++.|+
T Consensus       200 ~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV-~PDI~tl--aK~LgGG~PigA  263 (404)
T COG4992         200 IPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGV-EPDILTL--AKALGGGFPIGA  263 (404)
T ss_pred             CCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCC-CCCEEEe--eccccCCcccee
Confidence            4    4489999999999999999999998654332222223355 4677766  455554455554

>PRK06541 hypothetical protein; Provisional

Probab=98.12  E-value=0.00021  Score=73.99  Aligned_cols=152  Identities=16%  Similarity=0.053  Sum_probs=86.1

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~  268 (375)
                      ...|+++||||+-.|+..||...... +.  +       .+..+|.....-|-...-+..+.+            ..+..
T Consensus       114 ~v~f~~sGseAve~AlklAr~~~~~~-g~--~-------~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~  183 (460)
T PRK06541        114 RVFFTTGGSEAVESAWKLAKQYFKLT-GK--P-------GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFR  183 (460)
T ss_pred             EEEEcCCcHHHHHHHHHHHHHHHHhc-CC--C-------CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEE
Confidence            57899999999999999999753210 00  0       012234444444544333332211            12333


Q ss_pred             EecCCCCC-----cC--------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596         269 IESDDKLS-----LR--------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD  331 (375)
Q Consensus       269 Vp~d~~g~-----md--------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD  331 (375)
                      +|.....+     -+        ++.|++++++.  ....+.+|+..--....|.+-+    +++|.++|++||+.+++|
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D  261 (460)
T PRK06541        184 VPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSD  261 (460)
T ss_pred             eCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence            44322111     12        35677777542  1122444444433556677777    999999999999999999


Q ss_pred             cccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      .++.|.......+.....|+ ..|.++  .-|.++.
T Consensus       262 EV~tGfGR~G~~~a~~~~gv-~PDivt--~gK~l~~  294 (460)
T PRK06541        262 EVICAFGRLGEMFGCERFGY-VPDIIT--CAKGITS  294 (460)
T ss_pred             chhhCCCcCchhhhhhhcCC-CCCEEE--ecccccC
Confidence            99955433322222222355 468776  5787664

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.11  E-value=6e-05  Score=75.66  Aligned_cols=148  Identities=18%  Similarity=0.064  Sum_probs=99.0

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG  279 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~  279 (375)
                      ..++++.+.+.|.+..+.+.-+..             ..+.++. -.+. ..|.++...++++|.+++.|-+  .++-..
T Consensus        84 ea~~ivnnn~aAVll~~~al~~~~-------------EvVis~g-~lV~-gg~~~v~d~~~~aG~~l~EvG~--tn~t~~  146 (395)
T COG1921          84 EAAAIVNNNAAAVLLTLNALAEGK-------------EVVVSRG-ELVE-GGAFRVPDIIRLAGAKLVEVGT--TNRTHL  146 (395)
T ss_pred             hheeeECCcHHHHHHHHhhhccCC-------------eEEEEcc-cccc-CCCCChhHHHHHcCCEEEEecc--cCcCCH
Confidence            357778777777666655432210             0000111 1233 6899999999999998877754  456788


Q ss_pred             HHHHHHHHHhhhcCCccEEEEEEcCCC--CccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEE
Q psy1596         280 DKLIEAIERDKKKHLIPFFVCGTLGTT--GACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSI  357 (375)
Q Consensus       280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT--~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi  357 (375)
                      .+++.+|.+.++      ++.-+..++  .+|. =+++++++||+++|++++||+|-|.-.-..|..+..++  ..||-+
T Consensus       147 ~d~~~AIne~ta------~llkV~s~~~~f~~~-l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV  217 (395)
T COG1921         147 KDYELAINENTA------LLLKVHSSNYGFTGM-LSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLV  217 (395)
T ss_pred             HHHHHHhccCCe------eEEEEeecccccccc-ccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEE
Confidence            999999988765      444444332  2222 35788999999999999999987764332333343332  247999


Q ss_pred             EEcCcccCCCCCcceee
Q psy1596         358 AFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       358 ~~d~HK~l~~P~~~g~l  374 (375)
                      ++|+||.|+.|. +|++
T Consensus       218 ~~SgdKllgGPq-aGii  233 (395)
T COG1921         218 SFSGDKLLGGPQ-AGII  233 (395)
T ss_pred             EEecchhcCCCc-cceE
Confidence            999999999998 6654

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=98.10  E-value=0.00018  Score=74.08  Aligned_cols=169  Identities=15%  Similarity=0.017  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|.++++.+                     .....|+.+|||||-.|+..||....                ++.
T Consensus        87 ~~la~~L~~~~p~~---------------------~~~v~f~~sGsEAve~AlklAr~~tg----------------r~~  129 (443)
T PRK08360         87 LLLAEKLIEIAPGD---------------------NPKVSFGLSGSDANDGAIKFARAYTK----------------RRK  129 (443)
T ss_pred             HHHHHHHHHhCCCC---------------------CCEEEEcCCHHHHHHHHHHHHHHhcC----------------CCe
Confidence            56777777776432                     12579999999999999999987520                112


Q ss_pred             EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCC------------cCHHHHHHHHHHhhhcCCccEEE
Q psy1596         244 VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLS------------LRGDKLIEAIERDKKKHLIPFFV  299 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~V  299 (375)
                      ++-....-|-...-+..+.+            ..+..+|..+..+            -+.+.+++++++... +..+.+|
T Consensus       130 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~iAAv  208 (443)
T PRK08360        130 ILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVY-AEGVAAL  208 (443)
T ss_pred             EEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccC-CCCeEEE
Confidence            33333334433333322221            1234444322111            123456666654211 2235566


Q ss_pred             EEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         300 CGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       300 v~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      ++.--.+++|.+-+    +++|.++|++||+++++|.+|.+......-+.....++ ..|.+++  -|.++.-+..|+
T Consensus       209 i~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~piga  283 (443)
T PRK08360        209 FAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISA  283 (443)
T ss_pred             EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEE
Confidence            66544456776633    99999999999999999999987533221111111244 3576766  888775444444

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=98.10  E-value=0.00033  Score=71.48  Aligned_cols=153  Identities=11%  Similarity=-0.050  Sum_probs=86.4

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~  267 (375)
                      ...|+++|||||-.|+..||....                ++.+|.....-|-...-++.+.+             ..+.
T Consensus        96 ~v~f~~sGseA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~  159 (420)
T TIGR00700        96 KSVFFNSGAEAVENAVKIARSYTG----------------RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVY  159 (420)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHhcC----------------CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcE
Confidence            579999999999999999987520                12244444455544433333321             1223


Q ss_pred             EEecCCCCC-------c----CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q psy1596         268 YIESDDKLS-------L----RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDA  332 (375)
Q Consensus       268 ~Vp~d~~g~-------m----d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDa  332 (375)
                      .+|.....+       .    +++.+++.+..... +....+|++.--...+|.+-+    +++|.++|++||++|++|.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DE  238 (420)
T TIGR00700       160 RAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVG-ANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADE  238 (420)
T ss_pred             EeCCCccccccccccchhHHHHHHHHHHHHHhhcC-CCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEe
Confidence            343311111       1    24567776642211 223455555544444565533    9999999999999999999


Q ss_pred             ccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         333 AYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       333 A~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +|.+......-+.....++ ..|.++  .-|.+..-+..|.
T Consensus       239 V~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~  276 (420)
T TIGR00700       239 VQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSG  276 (420)
T ss_pred             cccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEE
Confidence            9987643221111111233 467665  5787764444444

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06062 hypothetical protein; Provisional

Probab=98.09  E-value=0.00029  Score=72.70  Aligned_cols=146  Identities=15%  Similarity=0.022  Sum_probs=87.1

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC-----------eEEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV-----------KMRYI  269 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~-----------~v~~V  269 (375)
                      ...|+++|||||-.|+..||....                ++.+|.....-|-...-++.+.+.           .+..+
T Consensus       114 ~v~f~~SGsEAve~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~  177 (451)
T PRK06062        114 KVFFTNGGADANEHAVRMARLHTG----------------RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHF  177 (451)
T ss_pred             EEEEcCChHHHHHHHHHHHHHhhC----------------CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEe
Confidence            579999999999999999997520                122344444445444434333221           12233


Q ss_pred             ecCCCCC------cC-------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q psy1596         270 ESDDKLS------LR-------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDA  332 (375)
Q Consensus       270 p~d~~g~------md-------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDa  332 (375)
                      +.....+      -|       ++.|+++|+...  +..+.+|++.---...|.+-|    +++|.++|++||+.+++|.
T Consensus       178 ~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DE  255 (451)
T PRK06062        178 FGPFLYRSEFHATTEEEECERALAHLERVIELEG--PSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADE  255 (451)
T ss_pred             CCCCccccccCCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeec
Confidence            2211111      12       577888875321  122445555443345577777    9999999999999999999


Q ss_pred             ccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         333 AYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       333 A~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      ++.|......-+.....|+ ..|.+++  -|.++.
T Consensus       256 V~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lgg  287 (451)
T PRK06062        256 VMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNS  287 (451)
T ss_pred             cccCCCcCcHHHHHHhcCC-CCCeeee--chhhhc
Confidence            9998644332222223466 5787765  677664

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=98.09  E-value=0.00036  Score=71.89  Aligned_cols=153  Identities=15%  Similarity=0.044  Sum_probs=84.7

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~  267 (375)
                      ...|+++|||||-.|+..||....                ++.+|.....-|-...-++.+.+             ..+.
T Consensus       105 ~v~f~~SGseA~e~AiklAr~~tg----------------r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~  168 (445)
T PRK08593        105 RVTFGLSGSDANDGIIKFARAYTG----------------RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFV  168 (445)
T ss_pred             EEEECCchHHHHHHHHHHHHHhhC----------------CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcE
Confidence            578999999999999999987520                12244445555655444443322             1234


Q ss_pred             EEecCCCCC-----cCH-------HHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596         268 YIESDDKLS-----LRG-------DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD  331 (375)
Q Consensus       268 ~Vp~d~~g~-----md~-------e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD  331 (375)
                      .+|..+..+     -+.       +++++.+++... +....+|++.-.....|.+-+    +++|.++|++||+.+++|
T Consensus       169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~D  247 (445)
T PRK08593        169 HIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLP-ADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVD  247 (445)
T ss_pred             EeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcC-CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence            454322211     122       334444432111 112445555544445566655    999999999999999999


Q ss_pred             cccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .++.|....-..+.....|+ ..|.+++  -|.++.-++.|+
T Consensus       248 Ev~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~ga  286 (445)
T PRK08593        248 DIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSA  286 (445)
T ss_pred             chhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEE
Confidence            99966432211111111254 4687765  566543233333

>PLN00144 acetylornithine transaminase

Probab=98.08  E-value=0.00012  Score=73.77  Aligned_cols=157  Identities=14%  Similarity=0.083  Sum_probs=86.5

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~  268 (375)
                      ...|+++|||||-.|+..||.....+......+   ....+..++.....-|-...-+..+.+.            .+..
T Consensus        74 ~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~---~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~  150 (382)
T PLN00144         74 RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDP---AASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTF  150 (382)
T ss_pred             eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccc---cccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEE
Confidence            478999999999999999997532110000000   0000122444454555444434333221            1233


Q ss_pred             EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--cc--HHHHHHHHHhcCCEEEEecccccCcccchhh
Q psy1596         269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--DN--LEELGPICEKEGLWLHVDAAYAGSSFICPEF  344 (375)
Q Consensus       269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--Dp--l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~  344 (375)
                      +|.+     |+++|++.++..     .+.+|++.--.++.|.+  ++  +++|.++|++||+++++|.+|.+......-+
T Consensus       151 ~~~~-----d~~~l~~~~~~~-----~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~  220 (382)
T PLN00144        151 VEYG-----NLEAARKLIQKG-----KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLW  220 (382)
T ss_pred             eCCC-----CHHHHHHhcCCC-----CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHh
Confidence            3322     789999888421     24444444222332322  45  9999999999999999999998764322111


Q ss_pred             hhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         345 RKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       345 ~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .....++ ..|  .+.+-|.+..-+..|+
T Consensus       221 ~~~~~~~-~PD--i~t~sK~l~~G~pig~  246 (382)
T PLN00144        221 AHEAYGV-EPD--IMTLAKPLAGGLPIGA  246 (382)
T ss_pred             hhhhcCC-CCC--EEEecccccCCcceEE
Confidence            1112344 357  4455787764444444

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=98.06  E-value=0.0002  Score=74.45  Aligned_cols=164  Identities=13%  Similarity=0.015  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ..+.++.+.|++.+..                      -....|+.+||||+..|+..||....                
T Consensus       139 ~~~~~lAe~l~~~~p~----------------------~~~v~f~~SGsEA~e~AlklAR~~tg----------------  180 (474)
T PLN02482        139 LLENVLAEMVIDAVPS----------------------VEMVRFVNSGTEACMGVLRLARAYTG----------------  180 (474)
T ss_pred             HHHHHHHHHHHHhCCC----------------------CCEEEEeCChHHHHHHHHHHHHHhcC----------------
Confidence            3446777888887521                      12478999999999999999997521                


Q ss_pred             CceEEEecCCCchHHHHHH-H-Hc-----------CC------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEE
Q psy1596         241 SRLVAYCSDQAHSSVEKAG-L-IG-----------LV------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCG  301 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa-~-lg-----------~~------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~  301 (375)
                      ++.+|-....-|-...-.. . ..           +.      .+..+|.+     |+++|++.+++..   ..+.+|+.
T Consensus       181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~~---~~iAavI~  252 (474)
T PLN02482        181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKLFEANK---GEIAAVIL  252 (474)
T ss_pred             CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHHHHhCC---CceEEEEE
Confidence            1112323333333211100 0 00           00      12233322     7899999987532   22445555


Q ss_pred             EcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         302 TLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       302 t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .---.+.|.+-|    +++|.++|++||+.+++|.++.|. ...........|+ ..|-+++  -|.++.-++.|++
T Consensus       253 Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav  325 (474)
T PLN02482        253 EPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAY  325 (474)
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEE
Confidence            544445566654    668999999999999999999765 3322221222355 4787666  7877654555543

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=98.06  E-value=0.00034  Score=71.52  Aligned_cols=152  Identities=12%  Similarity=-0.015  Sum_probs=85.7

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~  267 (375)
                      ..+|+++|||||-.|+..||... +               ++.+|.....-|-...-++.+.+             ..+.
T Consensus       103 ~~~f~~sGseA~e~AlklAr~~t-g---------------r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~  166 (421)
T PRK09792        103 KTAFFTTGAEAVENAVKIARAHT-G---------------RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVY  166 (421)
T ss_pred             eEEEeCChHHHHHHHHHHHHHhc-C---------------CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcE
Confidence            47899999999999999999641 0               11233344444533332322211             1233


Q ss_pred             EEec--CCCCCcC----HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-cc---HHHHHHHHHhcCCEEEEecccccC
Q psy1596         268 YIES--DDKLSLR----GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DN---LEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       268 ~Vp~--d~~g~md----~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dp---l~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      .+|.  +..+ ++    .+.|++.+++... ...+.+|++.-...++|.+ -|   +++|.++|++||+++++|..+.+.
T Consensus       167 ~v~~p~~~~~-~~~~~~~~~l~~~~~~~~~-~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~  244 (421)
T PRK09792        167 HVPYPSDLHG-ISTQDSLDAIERLFKSDIE-AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGF  244 (421)
T ss_pred             EcCCCccccc-ccHHHHHHHHHHHHHhccC-CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence            3443  2222 22    4677777764211 1224456655544555643 24   999999999999999999999886


Q ss_pred             cccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         338 SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       338 ~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .....-+.....++ ..|-+  ..-|.+..-+..|.
T Consensus       245 gr~G~~~a~~~~~~-~pDi~--t~gK~l~~G~piga  277 (421)
T PRK09792        245 ARTGKLFAMDHYAD-KPDLM--TMAKSLAGGMPLSG  277 (421)
T ss_pred             CCCCchhHHHhcCC-CCcEE--EeehhhcCCCceEE
Confidence            43221111111132 45754  44788765444544

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=98.06  E-value=0.00052  Score=70.59  Aligned_cols=173  Identities=12%  Similarity=-0.001  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+.|++++...                    ......|+++||+||-.|+..||... .               +
T Consensus       100 ~~~~la~~l~~~~p~~--------------------~~~~v~f~~sGseA~e~AlklAr~~t-g---------------r  143 (443)
T PRK06058        100 GYVAVAEQLNRLTPGD--------------------HEKRSALFNSGAEAVENAVKIARSYT-G---------------R  143 (443)
T ss_pred             HHHHHHHHHHHhCCCC--------------------CCCEEEEeCCcHHHHHHHHHHHHHhh-C---------------C
Confidence            3367788888876422                    11257899999999999999998752 0               1


Q ss_pred             ceEEEecCCCchHHHHHHHHcC-------------CeEEEEecCCCCC------cCH-HHHHHHHH---HhhhcCCccEE
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDDKLS------LRG-DKLIEAIE---RDKKKHLIPFF  298 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~~g~------md~-e~Le~aI~---~~~~~g~~p~~  298 (375)
                      +.+|.....-|-...-++.+.+             ..+..+|....++      .+. +.+++.++   +... +..+.+
T Consensus       144 ~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~iAa  222 (443)
T PRK06058        144 QAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG-ADNLAA  222 (443)
T ss_pred             CeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC-CCceEE
Confidence            2244444445555444443322             1223333211111      111 22222222   1111 122445


Q ss_pred             EEEEcCCCCccccc----cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         299 VCGTLGTTGACAFD----NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       299 Vv~t~GtT~tGavD----pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |++.-.....|.+-    -+++|.++|++||+.+++|..+.|....-..+.....|+ ..|-+++.  |.++.-++.|++
T Consensus       223 vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av  299 (443)
T PRK06058        223 VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAV  299 (443)
T ss_pred             EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEE
Confidence            55443322334443    399999999999999999999987643222221222355 46888884  887654555543

>KOG0634|consensus

Probab=98.05  E-value=4.6e-05  Score=76.69  Aligned_cols=117  Identities=14%  Similarity=0.022  Sum_probs=93.4

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG  279 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~  279 (375)
                      ...++|+|.|.+...++..+.++                   +..|++.+.+..+...+++-.|++++.|+.|++| |++
T Consensus       125 wdiiit~G~t~~l~~~l~~~~N~-------------------gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~G-i~p  184 (472)
T KOG0634|consen  125 WDIIITNGNTDGLFKVLRTLINR-------------------GDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDG-IDP  184 (472)
T ss_pred             ceEEEecCCchHHHHHHHHhhcC-------------------CCceEEecccchHHHHhccccCceEEeccccCCC-CCH
Confidence            46899999999999999888763                   3579999999888888887666888888888877 999


Q ss_pred             HHHHHHHHHhhhc--C-CccEEEEEEc--CCCCcccc---ccHHHHHHHHHhcCCEEEEecccccC
Q psy1596         280 DKLIEAIERDKKK--H-LIPFFVCGTL--GTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       280 e~Le~aI~~~~~~--g-~~p~~Vv~t~--GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                      |.|++.++.....  + ..|. |..|.  |.++||..   ..-++|.+|||+|++.++.|.-|..-
T Consensus       185 E~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L  249 (472)
T KOG0634|consen  185 ESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL  249 (472)
T ss_pred             HHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence            9999999864432  1 2343 44444  66788865   66789999999999999999999774

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=98.05  E-value=0.00027  Score=72.17  Aligned_cols=168  Identities=11%  Similarity=0.004  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.++|+++.+.+                    .....+|+++|++|+-.|+..||....                ++.
T Consensus        87 ~~la~~l~~~~~~~--------------------~~~~~~f~~sGsea~e~Alklar~~~~----------------r~~  130 (425)
T PRK08088         87 LELCEKMNQKVPGD--------------------FAKKTLLVTTGSEAVENAVKIARAATK----------------RSG  130 (425)
T ss_pred             HHHHHHHHHhCCCC--------------------CCCEEEEeCCcHHHHHHHHHHHHHHhC----------------CCe
Confidence            57778888876543                    113578999999999999999987420                123


Q ss_pred             EEEecCCCchHHHHHHHHcCC-------------eEEE--EecCCCCCcC----HHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLV-------------KMRY--IESDDKLSLR----GDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~-------------~v~~--Vp~d~~g~md----~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                      +|.++..-|-+..-+..+++.             .+..  +|.+.++ ++    +++|+++++... .+..+.+|+..-.
T Consensus       131 iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi  208 (425)
T PRK08088        131 VIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDA-APEDIAAIIIEPV  208 (425)
T ss_pred             EEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhcc-CCCceEEEEECcc
Confidence            555566666655554444321             0111  2322221 23    456888775321 1223445554443


Q ss_pred             CCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhh-hhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         305 TTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFR-KWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       305 tT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~-~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      ....|.+    +.+++|.++|++||+++++|.+|++.... .... ....++ ..|-  .++-|.+..-+..|.
T Consensus       209 ~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~-g~~~~~~~~~~-~pdi--~s~sK~l~~G~rig~  278 (425)
T PRK08088        209 QGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRT-GTLFAMEQMGV-AADL--TTFAKSIAGGFPLAG  278 (425)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-cchhHHhhcCC-CCCE--EEEeccccCCCccee
Confidence            3344544    44999999999999999999999974321 1111 001232 2453  455788764444444

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=98.01  E-value=0.00021  Score=72.36  Aligned_cols=133  Identities=15%  Similarity=0.104  Sum_probs=99.8

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH-H---HcCCeEEEEecCCCCC
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG-L---IGLVKMRYIESDDKLS  276 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa-~---lg~~~v~~Vp~d~~g~  276 (375)
                      .++.+++|..|+..++++...                   +++.|++++..+....+-+ .   -.++++..+..     
T Consensus        80 ~~~afsSGmaAI~~~~l~ll~-------------------~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~-----  135 (396)
T COG0626          80 DAFAFSSGMAAISTALLALLK-------------------AGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP-----  135 (396)
T ss_pred             cEEEecCcHHHHHHHHHHhcC-------------------CCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC-----
Confidence            478899998888887665432                   2457888887776665544 2   25667776654     


Q ss_pred             cCHHHHHHHHHH-hhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCccc
Q psy1596         277 LRGDKLIEAIER-DKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYAN  355 (375)
Q Consensus       277 md~e~Le~aI~~-~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD  355 (375)
                      .|.+++++++.+ .      +.+|..-.++|++..+-||++|+++|+++|+.+.||..|+.+.+.-|    +..|   ||
T Consensus       136 ~~~~~~~~~~~~~~------tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~P----L~~G---aD  202 (396)
T COG0626         136 GDDEALEAAIKEPN------TKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRP----LELG---AD  202 (396)
T ss_pred             CChHHHHHHhcccC------ceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccCh----hhcC---CC
Confidence            355667777664 3      45899999999999999999999999999999999999999865432    2233   79


Q ss_pred             EEEEcCcccCCCCCc
Q psy1596         356 SIAFNPSKWLMVHFD  370 (375)
Q Consensus       356 Si~~d~HK~l~~P~~  370 (375)
                      -+.=+.-|.++.--+
T Consensus       203 IVvhSaTKyl~GHsD  217 (396)
T COG0626         203 IVVHSATKYLGGHSD  217 (396)
T ss_pred             EEEEeccccccCCcc
Confidence            999999999876543

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=98.00  E-value=0.00034  Score=71.28  Aligned_cols=149  Identities=15%  Similarity=0.136  Sum_probs=83.4

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce-EEEecCCCchHHHHHHHHcCC------------eEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL-VAYCSDQAHSSVEKAGLIGLV------------KMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~-vV~~S~~aH~Sv~kaa~lg~~------------~v~  267 (375)
                      ...|+++|||||-.|+..||.....+ + + +       ..+. ++.....-|-...-++.+.+.            .++
T Consensus       100 ~v~f~~sGseA~e~AlklAr~~~~~~-g-~-~-------~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~  169 (408)
T PRK04612        100 KVFLCNSGTEANEAAIKLVRKWASSQ-G-R-P-------ADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFR  169 (408)
T ss_pred             EEEEcCchHHHHHHHHHHHHHHHHhh-C-C-C-------CCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCce
Confidence            57999999999999999999764211 0 0 0       0122 344444445444434333221            112


Q ss_pred             EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-c----cHHHHHHHHHhcCCEEEEecccccCcccch
Q psy1596         268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-D----NLEELGPICEKEGLWLHVDAAYAGSSFICP  342 (375)
Q Consensus       268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-D----pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~  342 (375)
                      .+|.     -|+++|+++++..     .+ ..+...+...+|.+ .    -+++|.++|++||+++++|.+|.+....-.
T Consensus       170 ~~~~-----~d~~~l~~~~~~~-----~~-aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~  238 (408)
T PRK04612        170 YVDF-----NDVEALEAAMAGG-----DV-AAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT  238 (408)
T ss_pred             EcCC-----CCHHHHHHhhCCC-----CE-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc
Confidence            2222     2788999888421     23 34444444445543 2    399999999999999999999987433111


Q ss_pred             hhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         343 EFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       343 ~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      -+.....++ ..|.+++  -|.++.-+..|.
T Consensus       239 ~~a~~~~~~-~pdi~t~--~K~l~~G~piga  266 (408)
T PRK04612        239 LFAHWQEQV-TPDIVTL--AKALGGGFPIGA  266 (408)
T ss_pred             hhhhhhcCC-CCCEEEE--cchhcCCCceEE
Confidence            111111122 2455555  677654333443

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=98.00  E-value=0.00065  Score=69.80  Aligned_cols=151  Identities=13%  Similarity=-0.022  Sum_probs=98.8

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeE
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKM  266 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v  266 (375)
                      .-.+|+.+||+||=.|+..||....                +..+|-....-|-...-++.+.+             ..+
T Consensus       118 ~~~~f~~sGaeA~E~AiKiAr~~Tg----------------r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v  181 (447)
T COG0160         118 KKVFFGNSGAEAVEAAIKIARAYTG----------------RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGV  181 (447)
T ss_pred             CeEEecCCcHHHHHHHHHHHHHHhC----------------CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCe
Confidence            3478999999999999999998641                12244445555655555543321             136


Q ss_pred             EEEecCCCC------------CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc----cHHHHHHHHHhcCCEEEE
Q psy1596         267 RYIESDDKL------------SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD----NLEELGPICEKEGLWLHV  330 (375)
Q Consensus       267 ~~Vp~d~~g------------~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD----pl~eI~~ia~~~~iwlHV  330 (375)
                      ..+|-...+            .-..+.++++|......+..|.++++---..+.|.+.    =++++.++|++||+.|++
T Consensus       182 ~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~  261 (447)
T COG0160         182 YHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIA  261 (447)
T ss_pred             EEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence            777753222            2234556666666555555677788776666777764    389999999999999999


Q ss_pred             ecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         331 DAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       331 DaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      |..+.|....-.-+..-..|+ ..|-||++  |-++.-+
T Consensus       262 DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~G~  297 (447)
T COG0160         262 DEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGGGL  297 (447)
T ss_pred             eccccCCCccccchhhhhcCC-CCCEEEec--ccccCCC
Confidence            999999765443333334465 57888875  5444433

>PLN02452 phosphoserine transaminase

Probab=97.99  E-value=0.00017  Score=72.46  Aligned_cols=152  Identities=14%  Similarity=-0.046  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      -+++.+.|.++++.|.                   +..-.+++.|||.+.-.+++.....                  .+
T Consensus        54 ~~~~~~~L~~l~~~p~-------------------~y~v~~l~Gsgt~~~ea~~~nl~~~------------------~~   96 (365)
T PLN02452         54 IQKAEADLRELLDIPD-------------------NYEVLFLQGGASTQFAAIPLNLCKP------------------GD   96 (365)
T ss_pred             HHHHHHHHHHHhCCCC-------------------CceEEEEeCccHHHHHHHHHhcCCC------------------CC
Confidence            3788999999999982                   2122455577777765555443210                  01


Q ss_pred             eEEEecCCCchH---HHHHHHHcCCeEEEEecCCC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc-cccHHH
Q psy1596         243 LVAYCSDQAHSS---VEKAGLIGLVKMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA-FDNLEE  316 (375)
Q Consensus       243 ~vV~~S~~aH~S---v~kaa~lg~~~v~~Vp~d~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa-vDpl~e  316 (375)
                      .+.|+. ...++   ...|.+++...++....+.+  ...+++++    +.+.    .+..|..|...|.+|. +.|+++
T Consensus        97 ~~l~~~-~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~~v~~~hnETstGv~~~~~~~  167 (365)
T PLN02452         97 KADFVV-TGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELTP----DAKFVHICANETIHGVEFKDYPD  167 (365)
T ss_pred             eEEEEE-CCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCCC----CCcEEEECCCCCCCcEecCcccc
Confidence            133332 33333   33344566533333211111  13566654    2111    2458999999999999 588888


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +.+      +.+.||++.+.+....+- .       ..|.+..+.||.++ |.|.|+++
T Consensus       168 i~~------~~lvVDa~Ss~g~~pidv-~-------~~~v~~~saqK~lG-P~Gl~~v~  211 (365)
T PLN02452        168 VGN------VPLVADMSSNFLSKPVDV-S-------KYGVIYAGAQKNVG-PSGVTIVI  211 (365)
T ss_pred             cCC------CeEEEECCccccCcccCH-H-------HcCEEEEecccccC-CCCeEEEE
Confidence            753      799999999888754321 1       12334479999875 99999874

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=97.96  E-value=0.00054  Score=70.02  Aligned_cols=153  Identities=14%  Similarity=-0.014  Sum_probs=83.2

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC-------------eEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV-------------KMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~-------------~v~  267 (375)
                      ...|+++|||||-.|+..||....                ++.+|-....-|-...-++.+.+.             .+.
T Consensus       103 ~~~f~~sGseA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~  166 (421)
T PRK06777        103 KTAFFTTGAEAVENAVKIARAYTG----------------RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIF  166 (421)
T ss_pred             eEEEeCCcHHHHHHHHHHHHHhhC----------------CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcE
Confidence            578999999999999999987521                112333444445443333333221             122


Q ss_pred             EEecCCCC-----CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc-c---ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         268 YIESDDKL-----SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA-F---DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       268 ~Vp~d~~g-----~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa-v---Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      .+|..+..     .-+++.|++.+++.. .+..+.+|+..-.....|. +   +-+++|.++|++||+++++|.+|.+..
T Consensus       167 ~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g  245 (421)
T PRK06777        167 HALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFA  245 (421)
T ss_pred             EcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCc
Confidence            23321111     123567788775421 1112344444433333443 2   449999999999999999999998753


Q ss_pred             ccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         339 FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       339 ~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      ..-.-+.....++ ..|.++  .-|.+..-+..|.
T Consensus       246 r~g~~~~~~~~~~-~pDiv~--~sK~l~~G~piga  277 (421)
T PRK06777        246 RTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISA  277 (421)
T ss_pred             cCCchhhhhhcCC-CCCEEe--eehhhcCCCceEE
Confidence            3211111111233 357554  5787653344443

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=97.95  E-value=0.00077  Score=69.05  Aligned_cols=153  Identities=14%  Similarity=0.020  Sum_probs=82.4

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~  267 (375)
                      ...|+++|||||-.|+..||....                ++.++.....-|-...-+..+.+             ..+.
T Consensus       103 ~v~f~~SGseA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~  166 (425)
T PRK07495        103 KTIFVTTGAEAVENAVKIARAATG----------------RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVY  166 (425)
T ss_pred             EEEECCchHHHHHHHHHHHHHhhC----------------CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeE
Confidence            579999999999999999987420                11234344444533322222211             1234


Q ss_pred             EEecCC-CCCcC----HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         268 YIESDD-KLSLR----GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       268 ~Vp~d~-~g~md----~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      .+|... ...++    .++|++.+++... +..+.+|++.-.....|.+    +-+++|.++|++||+++++|.+|.+..
T Consensus       167 ~~~~~~~~~g~~~~~~~~~l~~~~~~~~~-~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g  245 (425)
T PRK07495        167 HVPFPVELHGVSVEQSLAALDKLFKADVD-PQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFA  245 (425)
T ss_pred             EecCCcccccccHHHHHHHHHHHHHhccC-CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCC
Confidence            455422 11133    3445666643111 1224445544333334533    459999999999999999999998753


Q ss_pred             ccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         339 FICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       339 ~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      ..-.-+.....++ ..|-+++  -|.++.-+..|+
T Consensus       246 r~G~~~a~~~~gv-~pDi~tl--sK~l~~G~piga  277 (425)
T PRK07495        246 RTGKLFAMEHHEV-AADLTTM--AKGLAGGFPLAA  277 (425)
T ss_pred             cCCCceeecccCC-CCCEEee--hhhhcCCccceE
Confidence            2211000111133 3565555  677654444444

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=97.95  E-value=6.6e-06  Score=81.81  Aligned_cols=106  Identities=16%  Similarity=0.090  Sum_probs=34.2

Q ss_pred             HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC-----ccccccHHHHHHHHHhcCCEEEEe
Q psy1596         257 KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG-----ACAFDNLEELGPICEKEGLWLHVD  331 (375)
Q Consensus       257 kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~-----tGavDpl~eI~~ia~~~~iwlHVD  331 (375)
                      ..++.+|.+++.|-+.  .+-.+++.+++|.++++      ++.-...|+.     ++. -+++++++++++|++++++|
T Consensus       106 ~vm~~sGa~lvEVGtt--N~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~-~~~~el~~la~~~~lp~i~D  176 (367)
T PF03841_consen  106 DVMRQSGARLVEVGTT--NRTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGE-VSLEELAELAKEHGLPVIVD  176 (367)
T ss_dssp             ----------------------------------------------------------------HHHHHHHHHT--EEEE
T ss_pred             cccccccccccccccc--ccccccccccccccccc------cccccccccccccccccc-ccHHHHHHHHhhcCCcEEEE
Confidence            3345677888877654  35677889999998765      4444444443     233 37999999999999999999


Q ss_pred             cccccCccc-------chhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         332 AAYAGSSFI-------CPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       332 aA~gg~~~~-------~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+-|...-+       -|..+..++  ..+|-++||+.|.++.|. +|++
T Consensus       177 lgsG~l~dl~~~gl~~Ep~v~~~~~--~GaDlV~fSGdKlLGGPQ-aGiI  223 (367)
T PF03841_consen  177 LGSGLLVDLSPYGLPDEPTVQEYLA--AGADLVTFSGDKLLGGPQ-AGII  223 (367)
T ss_dssp             -TTHHHHHHHTT----------CCC--CT-SEEEEETTSSSSS-S--EEE
T ss_pred             CCCCCCcCcccccCccccHHHHHhh--cCCCEEEEECCCcCCCCC-eEEE
Confidence            866543211       122222111  358999999999999998 6875

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>PRK07481 hypothetical protein; Provisional

Probab=97.95  E-value=0.0011  Score=68.43  Aligned_cols=172  Identities=12%  Similarity=0.005  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++.+.|.++++-+                    .-....|+++||||+-.|+..||.....+ +.  +       .++
T Consensus        88 ~~~lae~L~~~~~~~--------------------~~~~v~f~~sGsEAve~AlklAr~~~~~~-g~--~-------~r~  137 (449)
T PRK07481         88 AIELSYELIDMFAPE--------------------GMRRVFFSSGGSDSVETALKLARQYWKVR-GQ--P-------ERT  137 (449)
T ss_pred             HHHHHHHHHHhcCCC--------------------CCCEEEEcCchHHHHHHHHHHHHHHHHhc-CC--C-------CCc
Confidence            367788888876422                    11357899999999999999999754211 00  0       012


Q ss_pred             eEEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCC-----cCHHHHHHHHHHh----h--hcCCccEEE
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLS-----LRGDKLIEAIERD----K--KKHLIPFFV  299 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~-----md~e~Le~aI~~~----~--~~g~~p~~V  299 (375)
                      .+|.....-|-...-++.+.+            ..+..++.....+     -|++++++.+.+.    .  ..+..+.+|
T Consensus       138 ~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAv  217 (449)
T PRK07481        138 KFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAF  217 (449)
T ss_pred             EEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            234444444543332222211            1123333221111     2455544333211    1  112234555


Q ss_pred             EEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         300 CGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       300 v~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      ++.--....|.+-+    +++|.++|++||+.++.|..+.|....-.-+.....|+ ..|.+++  -|.+..
T Consensus       218 iiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~g  286 (449)
T PRK07481        218 IAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKGITS  286 (449)
T ss_pred             EEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eecccC
Confidence            55544344455433    99999999999999999999887643322111222355 4788887  676553

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=97.94  E-value=0.00025  Score=72.84  Aligned_cols=162  Identities=10%  Similarity=-0.071  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++.+.|.++++..                     .....|+.+||||+-.|+..||....                ++
T Consensus        95 ~~~la~~L~~~~~~~---------------------~~~v~f~~SGsEA~e~AiklAr~~tg----------------r~  137 (433)
T PRK00615         95 EILFAEELFSYLGLE---------------------DHKIRFVSSGTEATMTAVRLARGITG----------------RS  137 (433)
T ss_pred             HHHHHHHHHHhCCCC---------------------cCEEEEeCchHHHHHHHHHHHHHhhC----------------CC
Confidence            367778888876432                     13579999999999999999997521                11


Q ss_pred             eEEEecCCCchHH---HHHHHHcCC----------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc
Q psy1596         243 LVAYCSDQAHSSV---EKAGLIGLV----------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL  303 (375)
Q Consensus       243 ~vV~~S~~aH~Sv---~kaa~lg~~----------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~  303 (375)
                      .++-....-|-..   ..+..+.+.                ....+|.     -|+++|++.+++..   ..+.+|+..-
T Consensus       138 ~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~---~~~aavI~Ep  209 (433)
T PRK00615        138 IIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-----NDFQIFQTVMNSLG---HRVAGVIFEP  209 (433)
T ss_pred             EEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-----CCHHHHHHHHHhcC---CceEEEEECC
Confidence            1333333333321   111111110                0111111     27899999987532   2244555554


Q ss_pred             CCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         304 GTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       304 GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      ...+.|.+-|    +++|.++|++||+.+++|.++.|. ..-........++ ..|.++  .-|.++.-++.|+
T Consensus       210 v~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~--~gK~lggG~p~~a  279 (433)
T PRK00615        210 ICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITV--YGKILGGGLPAAA  279 (433)
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEE--EcccccCCcceee
Confidence            4455576655    569999999999999999999654 3222221222355 478776  4787764343443

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=97.91  E-value=0.00079  Score=69.27  Aligned_cols=152  Identities=13%  Similarity=0.009  Sum_probs=83.1

Q ss_pred             EEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEEEe
Q psy1596         203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRYIE  270 (375)
Q Consensus       203 vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp  270 (375)
                      +++++|||||-.|+..||....                ++.+|.....-|-...-+..+.+            ..+..+|
T Consensus       106 f~~~sGsEA~e~AlklAr~~tg----------------r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~  169 (442)
T TIGR00709       106 FPGPSGADAVEAAIKLAKTYTG----------------RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMP  169 (442)
T ss_pred             EeCCCHHHHHHHHHHHHHHhcC----------------CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeC
Confidence            4458999999999999997520                12245555555655444443322            1233444


Q ss_pred             cCCCCCc--------CHHH----HHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEeccc
Q psy1596         271 SDDKLSL--------RGDK----LIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAAY  334 (375)
Q Consensus       271 ~d~~g~m--------d~e~----Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~  334 (375)
                      ..+..+.        +.+.    +++.++........+.+|++.-.....|.+    +-+++|.++|++||++++.|..+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~  249 (442)
T TIGR00709       170 YPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQ  249 (442)
T ss_pred             CCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence            3222222        2233    333332111111123444444333334443    45999999999999999999999


Q ss_pred             ccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         335 AGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       335 gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .|....-.-+.....|+ ..|.+++  -|.++.-++.|+
T Consensus       250 tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Piga  285 (442)
T TIGR00709       250 AGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAV  285 (442)
T ss_pred             cCCCCCCchhHHHHcCC-CCcEEEE--cccccCCcccEE
Confidence            87644322122112355 4788885  676654444444

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=97.90  E-value=0.0011  Score=68.44  Aligned_cols=150  Identities=17%  Similarity=0.110  Sum_probs=84.2

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce-EEEecCCCchHHHHHHHHcC------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL-VAYCSDQAHSSVEKAGLIGL------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~-vV~~S~~aH~Sv~kaa~lg~------------~~v~  267 (375)
                      ...|+++|||||-.|+..||.....+ +.          ..+. +|.....-|-...-++.+.+            ..+.
T Consensus       108 ~v~f~~sGseA~e~AlklAr~~~~~~-g~----------~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~  176 (442)
T PRK13360        108 HVFFTNSGSESVDTALKIALAYHRAR-GE----------GSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVD  176 (442)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHHHhc-CC----------CCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCE
Confidence            47899999999999999999753211 00          0122 33334444433222222211            1223


Q ss_pred             EEecCCC-CC--c----------CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEE
Q psy1596         268 YIESDDK-LS--L----------RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHV  330 (375)
Q Consensus       268 ~Vp~d~~-g~--m----------d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHV  330 (375)
                      .+|...+ .+  .          ..++|+++++...  +..+.+|++---..+.|.+-|    +++|.++|++||+.+++
T Consensus       177 ~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~  254 (442)
T PRK13360        177 HLPHTLDLARNAFSKGQPEHGAELADELERLVTLHD--ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIF  254 (442)
T ss_pred             EeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcC--CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence            3443211 00  1          2467888876321  123445555544455677777    99999999999999999


Q ss_pred             ecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         331 DAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       331 DaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      |.++.|....-.-+.....|+ ..|.+++  -|.++
T Consensus       255 DEv~tG~GrtG~~~a~~~~gv-~PDivt~--gK~l~  287 (442)
T PRK13360        255 DEVITGFGRLGAPFAAQYFGV-TPDLLTC--AKGLT  287 (442)
T ss_pred             echhhCCCCCccchhhhhcCC-CCceeee--eeccc
Confidence            999955422221111112355 3687655  78764

>PRK06149 hypothetical protein; Provisional

Probab=97.90  E-value=0.00052  Score=77.24  Aligned_cols=154  Identities=12%  Similarity=-0.006  Sum_probs=88.7

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHc-----------C--CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG-----------L--VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg-----------~--~~v~  267 (375)
                      ...|+++|||||-.|+..||....                ++.+|.....-|-...-+..+.           .  ..+.
T Consensus       643 ~v~f~~SGsEA~e~AlklAr~~tg----------------r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~  706 (972)
T PRK06149        643 TVFLVNSGSEANDLAIRLAWAASG----------------RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVH  706 (972)
T ss_pred             EEEEeCCchHHHHHHHHHHHHhcC----------------CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeE
Confidence            479999999999999999987520                1234555555563222221110           0  1133


Q ss_pred             EEecCCCCC--c---C-----HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecc
Q psy1596         268 YIESDDKLS--L---R-----GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAA  333 (375)
Q Consensus       268 ~Vp~d~~g~--m---d-----~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA  333 (375)
                      .++..+.++  .   +     .+++++.++...+.+..+.+|++.---...|.+-+    +++|.++|++||+.+++|.+
T Consensus       707 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV  786 (972)
T PRK06149        707 PVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEV  786 (972)
T ss_pred             EeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEee
Confidence            343322111  1   2     35666666543333444555655543345577766    99999999999999999999


Q ss_pred             cccCcccchhh-hhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         334 YAGSSFICPEF-RKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       334 ~gg~~~~~~~~-~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +.|....-..+ .....|+ ..|-+++  -|.++.-++.|+
T Consensus       787 ~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~a  824 (972)
T PRK06149        787 QVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGA  824 (972)
T ss_pred             hhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEE
Confidence            95543322111 1111355 4788866  677664344444

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=97.89  E-value=0.00064  Score=70.39  Aligned_cols=164  Identities=15%  Similarity=0.058  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      +.+.++.+.|+++++-+                     .....|++|||+|+-.|+..||... .               
T Consensus       113 ~~~~~lae~L~~~~p~~---------------------~~~v~f~~sGseAve~AlklAr~~t-g---------------  155 (459)
T PRK06082        113 ETAIECAEKLTEIAGGE---------------------LNRVLFAPGGTSAIGMALKLARHIT-G---------------  155 (459)
T ss_pred             HHHHHHHHHHHHhCCCC---------------------CCEEEECCCcHHHHHHHHHHHHHhc-C---------------
Confidence            34467788888876422                     1357999999999999999998641 0               


Q ss_pred             CceEEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCC-----cC------HHHHHHHHHHhhhcCCccE
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLS-----LR------GDKLIEAIERDKKKHLIPF  297 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~-----md------~e~Le~aI~~~~~~g~~p~  297 (375)
                      ++.+|.....-|-...-++.+.+.            .+..+|.....+     .|      ++.|++.|++.   + ...
T Consensus       156 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---~-~vA  231 (459)
T PRK06082        156 NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE---G-GIG  231 (459)
T ss_pred             CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC---C-CEE
Confidence            122455555566555445444321            123344211111     11      35577777531   2 233


Q ss_pred             EEEEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         298 FVCGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       298 ~Vv~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|++.-.....+.+-|   +++|.++|++||+.+++|.++.|....-.-+.....|+ ..|.++  .-|.++.-
T Consensus       232 avIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~gG  302 (459)
T PRK06082        232 AFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLGGG  302 (459)
T ss_pred             EEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--ecccccCC
Confidence            4444332222122333   99999999999999999999987543322222222365 578887  47876643

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=97.86  E-value=0.0013  Score=67.75  Aligned_cols=150  Identities=19%  Similarity=0.113  Sum_probs=83.1

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~  268 (375)
                      ...|+++|||||-.|+..||.....+ +.  +       .+.-+|.....-|-...-+..+.+            ..+..
T Consensus       111 ~v~f~~sGseAve~AlklAr~~~~~~-g~--~-------~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~  180 (445)
T PRK09221        111 HVFFTNSGSESVDTALKIALAYHRAR-GQ--G-------TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDH  180 (445)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeE
Confidence            47899999999999999999754211 00  0       011234444444533222222211            11233


Q ss_pred             EecCC---C--CC--------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596         269 IESDD---K--LS--------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD  331 (375)
Q Consensus       269 Vp~d~---~--g~--------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD  331 (375)
                      +|...   .  +.        -..++|++.++....  ..+.+|++.-.....|.+-|    +++|.++|++||+.+++|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D  258 (445)
T PRK09221        181 LPHTLDLPENAFSKGQPEHGAELADDLERLVALHDA--STIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFD  258 (445)
T ss_pred             eCCCccccccccCCChHHHHHHHHHHHHHHHHhcCC--CcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence            33211   0  00        113577777764211  23456666655556688777    999999999999999999


Q ss_pred             cccccCcccchhhhhhhcCCCcccEEEEcCcccC
Q psy1596         332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWL  365 (375)
Q Consensus       332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l  365 (375)
                      .++.|....-.-+.....++ ..|.+++  -|.+
T Consensus       259 EV~tG~GRtG~~~~~~~~gv-~PDi~~~--gK~l  289 (445)
T PRK09221        259 EVITGFGRLGAAFAAERFGV-TPDIITF--AKGL  289 (445)
T ss_pred             ehhhCCCcCchhhHHHhcCC-CCCEEEe--cccc
Confidence            99966432211111112344 3586665  4554

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=97.83  E-value=0.002  Score=66.73  Aligned_cols=153  Identities=13%  Similarity=0.055  Sum_probs=85.1

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE-ecCCCchHHHHHHHHcC-------------CeE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY-CSDQAHSSVEKAGLIGL-------------VKM  266 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~-------------~~v  266 (375)
                      ...|+.+|||||-.|+..||...                 .+..|+ ....-|-...-+..+.+             ..+
T Consensus       115 ~v~f~~SGsEA~e~AlklAr~~t-----------------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~  177 (457)
T PRK05639        115 KVLFGLSGSDAVDMAIKVSKFST-----------------RRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNV  177 (457)
T ss_pred             EEEEeCchHHHHHHHHHHHHHhc-----------------CCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCc
Confidence            57999999999999999999642                 122343 34444544433333321             124


Q ss_pred             EEEecCCCCC--------cCHH--------HHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCC
Q psy1596         267 RYIESDDKLS--------LRGD--------KLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGL  326 (375)
Q Consensus       267 ~~Vp~d~~g~--------md~e--------~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~i  326 (375)
                      ..+|..+..+        -|.+        .|++.|......+....+|++.--....|.+    +=+++|.++|++||+
T Consensus       178 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~  257 (457)
T PRK05639        178 VWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGI  257 (457)
T ss_pred             eEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence            4555432111        1233        3444332211112234455554333334544    349999999999999


Q ss_pred             EEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         327 WLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       327 wlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .+++|.++.|....-.-+.....|+ ..|-+++  -|.++.-++.|+
T Consensus       258 llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~a  301 (457)
T PRK05639        258 LLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGLSG  301 (457)
T ss_pred             EEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCccee
Confidence            9999999987533222112222366 4798884  788764455443

>PRK06105 aminotransferase; Provisional

Probab=97.82  E-value=0.0015  Score=67.75  Aligned_cols=168  Identities=11%  Similarity=0.026  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++.+.|++++.-+                     -....|+.+|||||-.|+..||.....+ +.  .       .++
T Consensus        94 ~~~lae~L~~~~p~~---------------------~~~v~f~~SGseAve~AlKlar~~~~~~-g~--t-------~r~  142 (460)
T PRK06105         94 VIDLAEKLVAMAPVP---------------------MSKVFFTNSGSEANDTVVKLVWYYNNAL-GR--P-------EKK  142 (460)
T ss_pred             HHHHHHHHHHhCCCC---------------------CCEEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCc
Confidence            366778888876322                     1347899999999999999998643111 00  0       012


Q ss_pred             eEEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCc-------------CHHHHHHHHHHhhhcCCccE
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSL-------------RGDKLIEAIERDKKKHLIPF  297 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~m-------------d~e~Le~aI~~~~~~g~~p~  297 (375)
                      .+|.....-|-...-+..+.+.            .+..+|.....+.             ..++|+++|....  ...+.
T Consensus       143 ~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iA  220 (460)
T PRK06105        143 KIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEG--PDTIA  220 (460)
T ss_pred             EEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcC--CCceE
Confidence            3444455556554444333221            1223332111111             2356777775321  12344


Q ss_pred             EEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         298 FVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       298 ~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      +|++---....|.+-+    +++|.++|++||+.+++|.++.|....-.-+.....++ ..|.+++  -|.++
T Consensus       221 avIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~--gK~lg  290 (460)
T PRK06105        221 AFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVM--SKQLS  290 (460)
T ss_pred             EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeee--ecccc
Confidence            5555543444566655    99999999999999999999966533322222222355 3787766  56654

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=97.81  E-value=9e-05  Score=72.39  Aligned_cols=161  Identities=14%  Similarity=0.003  Sum_probs=107.3

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ...+-+.+.+.|+.++|...                      +-+...++|..|+.-++.+--+.               
T Consensus        74 W~~lp~~lgdklApLiGA~~----------------------~Evvv~dtts~nl~k~L~aalr~---------------  116 (407)
T COG3844          74 WFDLPERLGDKLAPLIGARA----------------------GEVVVTDTTSINLFKVLAAALRP---------------  116 (407)
T ss_pred             hhhchhHHHHHhhhhhcCCC----------------------CceEEeCCcchHHHHHHHHHhcc---------------
Confidence            33444788899999999862                      22555666667776555543221               


Q ss_pred             hcCceEEEecCCCc-hHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         239 INSRLVAYCSDQAH-SSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       239 ~~~~~vV~~S~~aH-~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                       ..+..|++|+-.- .+=...+. +..++..+-.+-.+.+.|+++++++..+.+      +|+.+..+.-||..-++.+|
T Consensus       117 -~~~r~vIv~E~~~fpTdly~a~-g~~~~~~~~~~~~~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~ai  188 (407)
T COG3844         117 -QEGRRVIVSEGDNFPTDLYIAE-GLADLLGIGYDLEGVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAI  188 (407)
T ss_pred             -CCCceEEeecCCCCCcchhhhc-chhhhhcccccceeeeChHHHHHhhccceE------EEEeccccccccceeeHHHH
Confidence             1122455665443 22222221 111112222344566788999999998854      78888888889999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      ..+++++|+.+.=|=||+++++...-     .. ..||+-+.+.||+|..-.|
T Consensus       189 T~~AH~~galv~wDLAHsaGavp~~L-----h~-~gaDfaigcsyKYLNgGPG  235 (407)
T COG3844         189 TALAHQHGALVGWDLAHSAGAVPVDL-----HA-AGADFAIGCSYKYLNGGPG  235 (407)
T ss_pred             HHHHHhcCceEEeehhcccCCcceee-----cc-cCCCeeeeeeceeccCCCC
Confidence            99999999999999999999865421     11 2579999999999875443

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=97.79  E-value=0.00016  Score=72.86  Aligned_cols=153  Identities=10%  Similarity=-0.111  Sum_probs=103.1

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      +-.++.+.|.++|+.|.                   +..-.++++|||.+.=.++......                  +
T Consensus        40 i~~e~~~~L~~l~~~~~-------------------~~~v~~l~GsGT~a~Eaa~~nl~~~------------------~   82 (374)
T TIGR01365        40 KLAEAIKKTREMLGVPA-------------------DYLIGIVPASDTGAVEMALWSMLGC------------------R   82 (374)
T ss_pred             HHHHHHHHHHHHhCCCC-------------------CcEEEEECCchHHHHHHHHHHcCCC------------------C
Confidence            34788999999999872                   2223566888888766655543210                  1


Q ss_pred             ceEEEecCCCchHHH---HHHHHcCC-eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         242 RLVAYCSDQAHSSVE---KAGLIGLV-KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~---kaa~lg~~-~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      +..+++..  .++-.   +.++..+. ++..+..+-.-.+|+++++.    . +      .|++|+.-|.||...|+++|
T Consensus        83 g~~vLv~g--~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~----~-~------~v~~vhnETSTGv~npv~~i  149 (374)
T TIGR01365        83 GVDVLAWE--SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF----K-N------DVVFTWNGTTSGVRVPNGDF  149 (374)
T ss_pred             CCeEEEEC--HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC----C-C------CEEEecCCCchheecccccc
Confidence            22333332  33333   44444455 46777665555689998872    1 1      26789999999999999877


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++.+  ++..+.||+.=+.++...+     ++   .+|.+..+..|.|+.|-|.|++
T Consensus       150 ~~~~--~~~lliVDavSs~g~~~l~-----~d---~iDv~~tgsQK~L~~ppGls~v  196 (374)
T TIGR01365       150 IPAD--REGLTICDATSAAFAQDLD-----YH---KLDVVTFSWQKVLGGEGAHGML  196 (374)
T ss_pred             cccc--CCCcEEEEccchhcCCCCC-----hh---HCcEEEEechhccCCCCceEEE
Confidence            6432  4899999998777655332     12   2699999999999999999876

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=97.78  E-value=0.00096  Score=67.36  Aligned_cols=179  Identities=15%  Similarity=0.070  Sum_probs=113.9

Q ss_pred             cccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCch
Q psy1596         107 TTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLD  186 (375)
Q Consensus       107 ~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~  186 (375)
                      -||+|.|    .|.|||..|-.+                           .|+.+.--+....+++|.|++..       
T Consensus        97 ile~pew----yTaYTPYQpEIS---------------------------QGrLqaLfefQtlv~dLTGm~VA-------  138 (450)
T COG0403          97 ILENPEW----YTAYTPYQPEIS---------------------------QGRLEALFEFQTLVADLTGLDVA-------  138 (450)
T ss_pred             hhcCccc----cccCCCCchhhh---------------------------hHHHHHHHHHHHHHHHHhCCCcc-------
Confidence            4889988    788888766544                           33333335566789999999842       


Q ss_pred             hhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHH--H--c
Q psy1596         187 KELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL--I--G  262 (375)
Q Consensus       187 ~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~--l--g  262 (375)
                                    +.-+--+||.+ -.|+..++....               .++-.+++++..|......++  .  .
T Consensus       139 --------------NASm~DeaTAa-AEAm~ma~r~~k---------------~k~~~~~V~~~vhpqt~~Vl~Tra~~~  188 (450)
T COG0403         139 --------------NASMLDEATAA-AEAMLMAKRVTK---------------KKRNKFLVPKDVHPQTLDVLRTRAEGL  188 (450)
T ss_pred             --------------cchhhhhHHHH-HHHHHHHHHhhc---------------CcCceEEecCCCCHHHHHHHHhhcccC
Confidence                          12233344433 233333322110               013479999999999988875  2  3


Q ss_pred             CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecc-cccCcccc
Q psy1596         263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAA-YAGSSFIC  341 (375)
Q Consensus       263 ~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA-~gg~~~~~  341 (375)
                      |.++..++.+     |.++|+++ +. .    -.+.|++..+++.-+.+.++.+|.+.+++++..+.|=+= .+.+.+-.
T Consensus       189 g~~i~~~~~~-----d~~~l~~~-~~-~----~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~p  257 (450)
T COG0403         189 GIEIEVVDAD-----DLDDLESA-DD-G----DVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKP  257 (450)
T ss_pred             ceEEEEeccc-----hhhhhhhc-cc-c----CeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCC
Confidence            4666666665     78888887 32 1    156899999975444788899999999999987665331 22222212


Q ss_pred             hhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         342 PEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       342 ~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      |       |=-.||-+.=|..-+ ++|++=|
T Consensus       258 P-------Ge~GADIvvG~~Qrf-GvPmgfG  280 (450)
T COG0403         258 P-------GEFGADIVVGSAQRF-GVPMGFG  280 (450)
T ss_pred             c-------cccCCceEEecCccc-CCCcCCC
Confidence            2       112489999999985 6788765

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=97.77  E-value=0.00067  Score=69.57  Aligned_cols=138  Identities=17%  Similarity=0.078  Sum_probs=76.2

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEec-CCCchHHHHHH----HHc-CC------eEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCS-DQAHSSVEKAG----LIG-LV------KMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S-~~aH~Sv~kaa----~lg-~~------~v~~  268 (375)
                      ...|+++|||||-.|+..||....                 +..|+.. ...+.+.....    ... +.      .+..
T Consensus       106 ~v~f~~sGseA~e~AlklAr~~tg-----------------r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~  168 (431)
T PRK06209        106 MVKFCKNGSDATSAAVRLARAYTG-----------------RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVT  168 (431)
T ss_pred             eEEEecCHHHHHHHHHHHHHHHhC-----------------CCeEEEeccCccccccccccccCCCCCCCChhHhccccc
Confidence            478999999999999999997521                 1123221 11111111100    010 10      1112


Q ss_pred             EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhh
Q psy1596         269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWL  348 (375)
Q Consensus       269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~  348 (375)
                      ++.     -|+++|++++++..   ..+.+|++.-.....+..+.+++|.++|++||+.+++|.++.|......-... .
T Consensus       169 ~~~-----~d~~~l~~~l~~~~---~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~-~  239 (431)
T PRK06209        169 FRY-----NDIASLEALFEDHP---GRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK-L  239 (431)
T ss_pred             cCC-----CCHHHHHHHHHhCC---CCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH-H
Confidence            221     27899999997521   12334444332223444566999999999999999999998665321100111 1


Q ss_pred             cCCCcccEEEEcCcccCCC
Q psy1596         349 AGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       349 ~gie~aDSi~~d~HK~l~~  367 (375)
                      .++ ..|-+++  -|.++.
T Consensus       240 ~gv-~PDi~t~--gK~lgg  255 (431)
T PRK06209        240 YGI-VPDLSCF--GKALGN  255 (431)
T ss_pred             hCC-Ccceeee--hhhhcC
Confidence            244 3576554  566654

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=97.76  E-value=0.0021  Score=66.49  Aligned_cols=150  Identities=15%  Similarity=0.053  Sum_probs=83.9

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~  268 (375)
                      ...|+++||+||-.|+..||.....+...          .+..+|.....-|-...-+..+.+            ..+..
T Consensus       116 ~v~f~~sGseAve~AlKlA~~~~~~rg~~----------~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~  185 (453)
T PRK06943        116 HAFFASDGASAVEIALKMSFHAWRNRGRG----------DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHV  185 (453)
T ss_pred             EEEEeCCCHHHHHHHHHHHHHHHHHhCCC----------CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEE
Confidence            57999999999999999998754221000          012234444444543322322221            12233


Q ss_pred             EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEcC-CCCcccc----ccHHHHHHHHHhcCCEEEEe
Q psy1596         269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTLG-TTGACAF----DNLEELGPICEKEGLWLHVD  331 (375)
Q Consensus       269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGav----Dpl~eI~~ia~~~~iwlHVD  331 (375)
                      +|.....+            -++++|+++|+..   +..+.+|++.-. ....|.+    +=+++|.++|++||+.+++|
T Consensus       186 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~D  262 (453)
T PRK06943        186 VASPDARGARPGETAADVAARALADVRRLFAER---AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIAD  262 (453)
T ss_pred             ECCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEee
Confidence            44321111            1246777777532   223445555421 2334543    45999999999999999999


Q ss_pred             cccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      ..+.|......-+.....|+ ..|-+++  -|.+.
T Consensus       263 EV~TG~GRtG~~fa~~~~gv-~PDivt~--gKgl~  294 (453)
T PRK06943        263 EIAVGCGRTGTFFACEQAGV-WPDFLCL--SKGIS  294 (453)
T ss_pred             chhhCCCCCcchhHHHhCCC-CCCeEee--ehhhc
Confidence            99987644322222222355 4788888  56544

>PRK07678 aminotransferase; Validated

Probab=97.76  E-value=0.002  Score=66.60  Aligned_cols=167  Identities=16%  Similarity=0.076  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|.++++..                      ....|+.+|||||-.|+..||.....+ +.  +       .++.
T Consensus        92 ~~lae~l~~~~~~~----------------------~~v~f~~sGseA~e~AlklAr~~t~~~-g~--~-------~r~~  139 (451)
T PRK07678         92 IKLAEKLNEWLGGE----------------------YVIFFSNSGSEANETAFKIARQYHAQK-GE--P-------HRYK  139 (451)
T ss_pred             HHHHHHHHHhCCCC----------------------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCcE
Confidence            66777777776432                      247899999999999999999754211 00  0       0122


Q ss_pred             EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCc---------CH---HHHHHHHHHhhhcCCccEEE
Q psy1596         244 VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSL---------RG---DKLIEAIERDKKKHLIPFFV  299 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~m---------d~---e~Le~aI~~~~~~g~~p~~V  299 (375)
                      +|-....-|-...-++.+.+            ..+..+|..+..+.         |.   +.+++.|+..  .+..+.+|
T Consensus       140 ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAv  217 (451)
T PRK07678        140 FISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAV  217 (451)
T ss_pred             EEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEE
Confidence            33334444543333332221            12333443221211         12   2356666522  12234455


Q ss_pred             EEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         300 CGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       300 v~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      ++.--....|.+-+    ++++.++|++||+.|++|..+.|+...-.-+.....|+ ..|.+++  -|.++.
T Consensus       218 i~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lgg  286 (451)
T PRK07678        218 IMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITS  286 (451)
T ss_pred             EEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--eccccc
Confidence            55433334455533    99999999999999999999976543221111112466 4798877  676553

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=97.74  E-value=0.0019  Score=66.21  Aligned_cols=150  Identities=15%  Similarity=0.036  Sum_probs=81.6

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC-------------eEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV-------------KMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~-------------~v~  267 (375)
                      ...|+.+||+|+-.|+..||.....+ +.  +       .+..+|..+..-|-...-+..+.+.             ...
T Consensus       107 ~v~f~~sGseA~e~AlklAr~~~~~~-~~--~-------~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~  176 (427)
T TIGR00508       107 CVFLADSGSVAVEVALKMALQYWQAK-GE--K-------NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQI  176 (427)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHHHhh-CC--C-------CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCe
Confidence            57999999999999999999864221 00  0       0122455555556443333322221             111


Q ss_pred             EEecC-CCC-----CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc-----ccccHHHHHHHHHhcCCEEEEeccccc
Q psy1596         268 YIESD-DKL-----SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC-----AFDNLEELGPICEKEGLWLHVDAAYAG  336 (375)
Q Consensus       268 ~Vp~d-~~g-----~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG-----avDpl~eI~~ia~~~~iwlHVDaA~gg  336 (375)
                      .+|.. ...     .-|.+++++.+++..   ....+|++---....|     ..+.+++|.++|++||+.+++|.++.|
T Consensus       177 ~~~~p~~~~~~~~~~~~~~~l~~~l~~~~---~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG  253 (427)
T TIGR00508       177 FAPAPQNRFDEEWNEEAITPLAKLMELHS---DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATG  253 (427)
T ss_pred             EcCCCCccccchhHHHHHHHHHHHHHhcC---CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence            22211 001     114677788876431   1233444332113333     348899999999999999999999865


Q ss_pred             CcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         337 SSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       337 ~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      ......-+.....++ ..|.+++  -|.+.
T Consensus       254 ~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~  280 (427)
T TIGR00508       254 FGRTGKLFACEHAGV-VPDILCV--GKALT  280 (427)
T ss_pred             CCcCCccchhhhcCC-CCCEEEe--chhhh
Confidence            322111111112244 4676764  77664

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK07046 aminotransferase; Validated

Probab=97.73  E-value=0.00094  Score=69.05  Aligned_cols=157  Identities=15%  Similarity=0.092  Sum_probs=93.9

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .+.+.++.+.|+++++++                       ...|+.+||||+..|+..||....               
T Consensus       114 ~~~~~~lAe~l~~~~~~~-----------------------~v~F~nSGtEA~e~AlrlAR~~TG---------------  155 (453)
T PRK07046        114 SEDAAWVGEELARRFGLP-----------------------YWQVATTATDANRFVLRWARAVTG---------------  155 (453)
T ss_pred             CHHHHHHHHHHHHHhCCC-----------------------EEEEECCHHHHHHHHHHHHHHhhC---------------
Confidence            345577888888887543                       368999999999999999997521               


Q ss_pred             cCceEEEecCCCchHHHHHH-H-Hc----------CC------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEE
Q psy1596         240 NSRLVAYCSDQAHSSVEKAG-L-IG----------LV------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCG  301 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa-~-lg----------~~------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~  301 (375)
                       ++.++-....-|-...-.. . ..          +.      .+..+|-+     |++.|++.+..    + ...+|++
T Consensus       156 -r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~----~-~vAavi~  224 (453)
T PRK07046        156 -RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-----DLAALEAALAD----G-DVAAVLA  224 (453)
T ss_pred             -CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-----CHHHHHHHhCC----C-CeEEEEE
Confidence             1113333333343211111 0 00          10      12222221     78999998842    1 2345554


Q ss_pred             EcCCCCcccccc----HHHHHHHHHhcCCEEEEecccc----cCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         302 TLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYA----GSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       302 t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~g----g~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .--....|.+-|    +++|.++|++||+.+++|..+.    .+. .    .. ..|+ ..|-+++  -|.++.-+++|+
T Consensus       225 EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg-~----~~-~~gv-~PDi~t~--gK~lggG~Pi~a  295 (453)
T PRK07046        225 EPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGG-Y----TR-AHGL-EPDFLVV--GKPIAGGVPCAV  295 (453)
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcc-h----hH-HhCC-Cccceee--hhhhcCCCccee
Confidence            433333455533    8999999999999999999984    221 1    11 1255 4788775  677665566665


Q ss_pred             e
Q psy1596         374 M  374 (375)
Q Consensus       374 l  374 (375)
                      +
T Consensus       296 v  296 (453)
T PRK07046        296 Y  296 (453)
T ss_pred             e
Confidence            3

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=97.72  E-value=0.00023  Score=70.38  Aligned_cols=126  Identities=18%  Similarity=0.253  Sum_probs=90.2

Q ss_pred             EEEecCCCchHHHHHH-HHcCCeEEEEecCC----------CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc---
Q psy1596         244 VAYCSDQAHSSVEKAG-LIGLVKMRYIESDD----------KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC---  309 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa-~lg~~~v~~Vp~d~----------~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG---  309 (375)
                      +..+....|+-.-++- ...|..++-|++++          .|.+|++.|++.|++.-.. .+|.++.....++..|   
T Consensus       125 ~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~-nvp~I~~tiT~NsagGQpV  203 (471)
T COG3033         125 KMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD-NVPYIVLTITNNSAGGQPV  203 (471)
T ss_pred             cccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc-cCcEEEEEEeccccCCCcc
Confidence            4556678888888875 45555566665532          3779999999999875443 4576555555555555   


Q ss_pred             ccccHHHHHHHHHhcCCEEEEeccccc-Ccccc----hhhhhh-----h-cCCCcccEEEEcCcccCCCCCc
Q psy1596         310 AFDNLEELGPICEKEGLWLHVDAAYAG-SSFIC----PEFRKW-----L-AGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       310 avDpl~eI~~ia~~~~iwlHVDaA~gg-~~~~~----~~~~~~-----~-~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      ++++++++.+||++|++.+..|+|.-+ .+.+.    |.|+++     . .-+.+||-++.|+-|=.++++|
T Consensus       204 Sm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG  275 (471)
T COG3033         204 SMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG  275 (471)
T ss_pred             hHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc
Confidence            469999999999999999999998654 44443    334432     1 1235799999999999999886

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=97.71  E-value=0.0029  Score=65.63  Aligned_cols=150  Identities=15%  Similarity=0.034  Sum_probs=85.4

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~  268 (375)
                      ...|+++|||||-.|+..||.....+-..          .+..+|.....-|-...-+..+.+.            .+..
T Consensus       109 ~v~f~~sGsEAve~AlKlAr~~~~~~g~t----------~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~  178 (466)
T PRK07030        109 RCFYADNGSSAIEVALKMSFHYWRNRGKP----------RKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIK  178 (466)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHHHHhCCC----------CCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEE
Confidence            57999999999999999998753221000          0122444444455444344333221            1233


Q ss_pred             EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCcccc----ccHHHHHHHHHhcCCEEEEe
Q psy1596         269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGACAF----DNLEELGPICEKEGLWLHVD  331 (375)
Q Consensus       269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tGav----Dpl~eI~~ia~~~~iwlHVD  331 (375)
                      +|.....+            -+++.|++.|++.   +....+|++.- .-...|.+    +=+++|.++|++||+.+++|
T Consensus       179 ~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~---~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~D  255 (466)
T PRK07030        179 VPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH---HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHD  255 (466)
T ss_pred             cCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence            43221111            1246677777632   22344555543 12333544    45999999999999999999


Q ss_pred             cccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      ..+.|......-+.....|+ ..|.+++  -|.+.
T Consensus       256 EV~TGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~  287 (466)
T PRK07030        256 EIAVGFGRTGTMFACEQAGI-RPDFLCL--SKALT  287 (466)
T ss_pred             ehhhCcCccccchHHHhcCC-CCCEEee--ehhcc
Confidence            99887644332222223366 4788888  56544

>PRK07036 hypothetical protein; Provisional

Probab=97.70  E-value=0.0052  Score=63.76  Aligned_cols=152  Identities=13%  Similarity=0.036  Sum_probs=83.6

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~  268 (375)
                      ...|+++|||||-.|+..||.....+ +.  .       .+..+|.....-|-...-+..+.+            ..+..
T Consensus       114 ~v~f~~sGseAve~AlklAr~~~~~~-g~--t-------~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~  183 (466)
T PRK07036        114 HVFLTTGGSTAVDSALRFVHYYFNVR-GR--P-------AKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHH  183 (466)
T ss_pred             EEEEeCCchHHHHHHHHHHHHHHHhc-CC--C-------CccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEE
Confidence            57999999999999999998753211 00  0       012233344444543322222221            11333


Q ss_pred             EecCCC----CCcC--------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q psy1596         269 IESDDK----LSLR--------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDA  332 (375)
Q Consensus       269 Vp~d~~----g~md--------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDa  332 (375)
                      +|....    ..+.        .+.+++.|...  .+..+.+|++.-.....|.+-|    +++|.++|++||+.+++|.
T Consensus       184 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DE  261 (466)
T PRK07036        184 LSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL--GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDE  261 (466)
T ss_pred             ecCCcccccccCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEee
Confidence            433111    1111        23455555431  1223556666654445566655    9999999999999999999


Q ss_pred             ccccCcccchhhhhh-hcCCCcccEEEEcCcccCCC
Q psy1596         333 AYAGSSFICPEFRKW-LAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       333 A~gg~~~~~~~~~~~-~~gie~aDSi~~d~HK~l~~  367 (375)
                      .+.|......-+... ..|+ ..|.+++  -|.++.
T Consensus       262 V~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~g  294 (466)
T PRK07036        262 VVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLTS  294 (466)
T ss_pred             chhCCCcCchhhhhhhhcCC-CCCEEEE--cccccc
Confidence            997753332111111 2355 4688777  676654

>PRK07480 putative aminotransferase; Validated

Probab=97.68  E-value=0.00098  Score=68.96  Aligned_cols=169  Identities=15%  Similarity=0.066  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ..+.++.+.|+++++-+                     -....|+++|||||-.|+..||.....+ +.          .
T Consensus        94 ~~~~~lae~L~~~~p~~---------------------~~~v~f~~SGseA~e~AlklAr~~~~~~-g~----------~  141 (456)
T PRK07480         94 PPAIELAAKLAEVAPPG---------------------FNHVFFTNSGSEANDTVLRMVRHYWALK-GK----------P  141 (456)
T ss_pred             HHHHHHHHHHHHhCCCC---------------------cCEEEEeCCcHHHHHHHHHHHHHHHHhc-CC----------C
Confidence            33467778888876321                     1257899999999999999999753211 00          0


Q ss_pred             CceEEE-ecCCCchHHHHHHHHcCC------------eEEEEecCCCCC----cC--------HHHHHHHHHHhhhcCCc
Q psy1596         241 SRLVAY-CSDQAHSSVEKAGLIGLV------------KMRYIESDDKLS----LR--------GDKLIEAIERDKKKHLI  295 (375)
Q Consensus       241 ~~~vV~-~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~----md--------~e~Le~aI~~~~~~g~~  295 (375)
                      .+..|+ ....-|-...-+..+++.            .+..++....++    .+        .++|++.+.+..  +..
T Consensus       142 ~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~  219 (456)
T PRK07480        142 QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELG--ADN  219 (456)
T ss_pred             CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCc
Confidence            122333 334445433333333221            122233111000    11        255655554321  122


Q ss_pred             cEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         296 PFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       296 p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      +.+|++.--....|.+-+    +++|.++|++||+.+++|..+.|......-+.....|+ ..|-+++  -|.+.
T Consensus       220 vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~  291 (456)
T PRK07480        220 VAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLT  291 (456)
T ss_pred             EEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhc
Confidence            445554433334466544    99999999999999999999976543322222222355 4787766  67654

>PRK07482 hypothetical protein; Provisional

Probab=97.67  E-value=0.0019  Score=66.93  Aligned_cols=151  Identities=12%  Similarity=-0.023  Sum_probs=83.7

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE-ecCCCchHHHHHHHHcC------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY-CSDQAHSSVEKAGLIGL------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~------------~~v~  267 (375)
                      ...|+.+||||+-.|+..||.....+ +.          ..+..|+ ....-|-...-+..+.+            ..+.
T Consensus       113 ~v~f~~sGSEAve~AlKlAr~~~~~~-g~----------~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~  181 (461)
T PRK07482        113 KVYYGLSGSDANETQIKLVWYYNNVL-GR----------PEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVL  181 (461)
T ss_pred             EEEEeCchHHHHHHHHHHHHHHHHhc-CC----------CCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCE
Confidence            47899999999999999999753211 00          0122333 33334432221211111            1223


Q ss_pred             EEecCCCCC-------------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEE
Q psy1596         268 YIESDDKLS-------------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHV  330 (375)
Q Consensus       268 ~Vp~d~~g~-------------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHV  330 (375)
                      .++.....+             -+.++|++.+.+..  +..+.+|++.--....|.+    +=+++|.++|++||+.+++
T Consensus       182 ~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~  259 (461)
T PRK07482        182 HTEAPHYYRRADAGMSEEQFSAYCADELEELILAEG--PDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIA  259 (461)
T ss_pred             EcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC--CCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEE
Confidence            333211111             14577787775321  1224455544322233444    3489999999999999999


Q ss_pred             ecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         331 DAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       331 DaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      |..+.|+.....-+.....|+ ..|-+++  -|.+..
T Consensus       260 DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~g  293 (461)
T PRK07482        260 DEVVTGFGRLGSMFGSDHYGI-EPDLITV--AKGLTS  293 (461)
T ss_pred             eccccCCCcCcchhhHHhcCC-CCCEEEE--cccccc
Confidence            999988754433222223466 4888887  576643

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=97.66  E-value=0.0022  Score=66.10  Aligned_cols=171  Identities=11%  Similarity=-0.010  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++.+.|.+++.-+                    ......|+++|||||-.|+..||....                ++
T Consensus        99 ~~~la~~L~~~~p~~--------------------~~~~v~f~~sGseA~e~AlklAr~~tg----------------r~  142 (451)
T PRK06918         99 YIELAEKLAALAPGS--------------------FDKKVLFLNSGAEAVENAVKIARKYTK----------------RQ  142 (451)
T ss_pred             HHHHHHHHHHhCCCC--------------------CCCEEEEcCCcHHHHHHHHHHHHHHhC----------------CC
Confidence            367777888876322                    112579999999999999999997521                11


Q ss_pred             eEEEecCCCchHHHHHHHHcC-------------CeEEEEecCCCC----CcC--------HHHHHHHHHHhhhcCCccE
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDDKL----SLR--------GDKLIEAIERDKKKHLIPF  297 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~~g----~md--------~e~Le~aI~~~~~~g~~p~  297 (375)
                      .+|-....-|-...-++.+.+             ..+..+|.....    .+.        .+.+++.+.... .+..+.
T Consensus       143 ~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iA  221 (451)
T PRK06918        143 GIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIA  221 (451)
T ss_pred             cEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceE
Confidence            233333334433333332221             113333321100    111        123444442211 122244


Q ss_pred             EEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         298 FVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       298 ~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +|++.--....|.+    +-+++|.++|++||++|+.|..|.+.......+.....++ ..|.+  ..-|.+..-+..|.
T Consensus       222 avi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pig~  298 (451)
T PRK06918        222 AVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLI--TVSKSLGAGVPISG  298 (451)
T ss_pred             EEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEE--eeehhhcCCCccEE
Confidence            44444322233443    3499999999999999999999987643211111111132 35744  45787765454454

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=97.65  E-value=0.0035  Score=65.20  Aligned_cols=150  Identities=15%  Similarity=0.077  Sum_probs=84.5

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~  268 (375)
                      ...|+++|||||-.|+..||.....+ +.  .       .+..+|.....-|-...-++.+.+.            .+..
T Consensus       131 ~v~f~~sGSEAvE~AlKlAr~~~~~~-g~--~-------~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~  200 (472)
T PRK08742        131 KVFYADNGSAGVEVALKMAFHYFHNR-GE--H-------RRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLF  200 (472)
T ss_pred             EEEEeCCchHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEE
Confidence            57999999999999999999864321 10  0       0122444444445443333333211            2333


Q ss_pred             EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCcccc----ccHHHHHHHHHhcCCEEEEe
Q psy1596         269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGACAF----DNLEELGPICEKEGLWLHVD  331 (375)
Q Consensus       269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tGav----Dpl~eI~~ia~~~~iwlHVD  331 (375)
                      +|..+..+            -+++.|+++++..   +..+.+|++.- -....|.+    +=++++.++|++||+.|++|
T Consensus       201 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~D  277 (472)
T PRK08742        201 APSPDAYLAEPGQSAEDYALQAADALQALFEQS---PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIAD  277 (472)
T ss_pred             eCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence            44321111            1356677777532   12344454442 12333543    44999999999999999999


Q ss_pred             cccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      ..+.|....-.-+.....|+ ..|-+++  -|.++
T Consensus       278 EV~TGfGRtG~~~a~e~~gv-~PDiv~~--gKgl~  309 (472)
T PRK08742        278 EIATGFGRTGTLFACEQAGV-MPDLLCL--SKGLT  309 (472)
T ss_pred             chhhCCCCCccchHHHhcCC-CCCEEEE--ccccc
Confidence            99887643322222222355 4788888  56654

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=97.65  E-value=0.0037  Score=64.73  Aligned_cols=150  Identities=13%  Similarity=0.059  Sum_probs=84.2

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~  268 (375)
                      ...|+.+|||||-.|+..||.....+ +.  .       .++.+|.....-|-...-++.+.+.            .+..
T Consensus       118 ~v~f~~SGseAve~AlklAr~~~~~~-g~--t-------gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~  187 (460)
T PRK06916        118 KVFYSDSGATAVEIAIKMAFQYWQNK-GK--P-------KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIK  187 (460)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHHHhc-CC--C-------CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEE
Confidence            57999999999999999999753221 00  0       0122444454556544444444321            1233


Q ss_pred             EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEc-CCCCcccc----ccHHHHHHHHHhcCCEEEEe
Q psy1596         269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTL-GTTGACAF----DNLEELGPICEKEGLWLHVD  331 (375)
Q Consensus       269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~-GtT~tGav----Dpl~eI~~ia~~~~iwlHVD  331 (375)
                      +|....++            -++++|++.|+..   +..+.+|++.- .....|.+    +=+++|.++|++||+.+++|
T Consensus       188 ~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~D  264 (460)
T PRK06916        188 MPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK---HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITD  264 (460)
T ss_pred             eCCCcccccccCCChHHHHHHHHHHHHHHHHhC---CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEee
Confidence            43211111            1356677777532   22344555543 12333544    44899999999999999999


Q ss_pred             cccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         332 AAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       332 aA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      ..+.|......-+.....|+ ..|-+++  -|.++
T Consensus       265 EV~TG~GRtG~~~a~~~~gv-~PDiv~~--gK~l~  296 (460)
T PRK06916        265 EVATGFGRTGKMFACEHENV-TPDIMTA--GKGLT  296 (460)
T ss_pred             chhhCCCcCchhhHHHhcCC-CCCeeee--ehhhh
Confidence            99877533322222222355 4787776  56544

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=97.65  E-value=0.00066  Score=68.22  Aligned_cols=150  Identities=11%  Similarity=-0.097  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEE-EeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFIT-FQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gv-ftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +++.+.|+++|+.|.                    ....+ +++|||.+.-.+++.....                 ..+
T Consensus        52 ~~~~~~Lr~Ll~~P~--------------------~y~Vlfl~GggT~~~ea~~~Nll~~-----------------g~~   94 (364)
T PRK12462         52 AQAEADLRDLLGIPD--------------------EYGVVFLQGGSSLQFSMIPMNFSRP-----------------GAA   94 (364)
T ss_pred             HHHHHHHHHHhCCCC--------------------CCeEEEEeccHHHHHHHHHHHcCCC-----------------CCc
Confidence            788999999999982                    23344 4556777765555433210                 011


Q ss_pred             -e-EEEecCCCchHHHHHHHHcCCeEEEEec----CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         243 -L-VAYCSDQAHSSVEKAGLIGLVKMRYIES----DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       243 -~-vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~----d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                       . ++.....++-....|.+++.  +..+..    +-....+++.+  .+.++      ..+|..|...|.+|..-|   
T Consensus        95 ~~~~~~tG~fg~r~~~ea~~~g~--v~~~~~~~~~~~~~~p~~~~~--~~~~d------~~~v~~t~NETstGv~~~---  161 (364)
T PRK12462         95 APEYVTTGYWSRKAIGEASRVAA--MRVVWDGAASGYRTLPSLAEL--DWDAR------APFRHYVSNETVEGLQFP---  161 (364)
T ss_pred             EEEEEeCCHHHHHHHHHHHhcCC--ceEecCcCCCCCCcCCCHHHh--ccCCC------CcEEEEccCCCCceEecC---
Confidence             1 23333444444455556664  443332    11123455554  11112      347999999999998765   


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                        ++.+.++..++||+.=+.+....+        +++.|.+.....|.++ |-|.+++
T Consensus       162 --~~~~~~~~llvvD~sS~~~s~pid--------~~~~dvi~agsQKnlg-P~Gltvv  208 (364)
T PRK12462        162 --DAAGLPDSPLIADMSSDFMSRPFD--------VEAYGMVYAHAQKNLG-PAGVTVA  208 (364)
T ss_pred             --cccccCCCeEEEEcCchhhCCCCC--------hHHccEEEeeccccCC-CCceEEE
Confidence              333446899999997766544221        2334999999999998 8898876

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=97.64  E-value=0.0015  Score=66.51  Aligned_cols=167  Identities=14%  Similarity=0.056  Sum_probs=104.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      -...++|.++.+.+.++++.-                      ...-|+++||||++.|+++||....            
T Consensus        89 g~Pte~Ei~~Aell~~~~p~~----------------------e~vrfvnSGTEAtmsAiRlARa~Tg------------  134 (432)
T COG0001          89 GAPTELEVELAELLIERVPSI----------------------EKVRFVNSGTEATMSAIRLARAYTG------------  134 (432)
T ss_pred             CCCCHHHHHHHHHHHHhcCcc----------------------cEEEEecchhHHHHHHHHHHHHhhC------------
Confidence            334456677778888876542                      2468999999999999999998631            


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH-Hc------------C------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccE
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL-IG------------L------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPF  297 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg------------~------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~  297 (375)
                          ++.+|-....-|-+.+.... .+            |      ..++.+|-+     |+++|++++++...   ...
T Consensus       135 ----R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~g~---~IA  202 (432)
T COG0001         135 ----RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAFEEYGD---DIA  202 (432)
T ss_pred             ----CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHHHHHcCC---cEE
Confidence                12345555555655444431 11            1      134555554     99999999987522   244


Q ss_pred             EEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         298 FVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       298 ~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +|++----.+.|.|-|    +++|.++|+++|..|+.|....|+-.-.-- ....-|| ..|..++  -|-++.-+++|+
T Consensus       203 aVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gG-aq~~~gi-~PDlttl--GKiIGGGlP~ga  278 (432)
T COG0001         203 AVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGG-AQGYYGV-EPDLTTL--GKIIGGGLPIGA  278 (432)
T ss_pred             EEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcc-cccccCc-Ccchhhh--hhhhcCCcceee
Confidence            6666555566777754    888999999999999999998775332111 1112233 2454443  455555555554

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=97.62  E-value=0.0018  Score=66.52  Aligned_cols=165  Identities=11%  Similarity=0.016  Sum_probs=89.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|+++++-+                     -....|+.+|||||-.|+..||.....+ +.          .++-
T Consensus        89 ~~la~~L~~~~p~~---------------------~~~v~f~~SGsEAve~AlklAr~~~~~~-g~----------~r~k  136 (428)
T PRK07986         89 IELCRKLVAMTPQP---------------------LECVFLADSGSVAVEVAMKMALQYWQAK-GE----------PRQR  136 (428)
T ss_pred             HHHHHHHHhhCCCC---------------------cCEEEEeCCcHHHHHHHHHHHHHHHHhc-CC----------CCcE
Confidence            66777787775321                     1357899999999999999999753211 00          0122


Q ss_pred             EEEecCCCchHHHHHHHHcC-------------CeEEEEecCC-C----C-CcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         244 VAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDD-K----L-SLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~-~----g-~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                      +|.....-|-...-+..+.+             ..+..+|.-. .    + .-|.++|++.|++.   +....+|+..-.
T Consensus       137 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi  213 (428)
T PRK07986        137 FLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPI  213 (428)
T ss_pred             EEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEech
Confidence            34444444543322222211             1122333211 1    0 12567888888642   112334444321


Q ss_pred             -CCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         305 -TTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       305 -tT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                       ....|.+    +.+++|.++|++||+.+++|.++.|....-.-+.....|+ ..|.++  .-|.++
T Consensus       214 ~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t--~gK~l~  277 (428)
T PRK07986        214 VQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILC--LGKALT  277 (428)
T ss_pred             hcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEE--echhhh
Confidence             2233332    4599999999999999999999866422111111112344 367776  467654

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=97.62  E-value=0.0032  Score=65.36  Aligned_cols=154  Identities=16%  Similarity=0.089  Sum_probs=87.5

Q ss_pred             EEEe-CChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596         202 ITFQ-TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY  268 (375)
Q Consensus       202 Gvft-sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~  268 (375)
                      .+|+ ++|||||-.|+..||....                ++.+|.....-|-...-++.+.+            ..+..
T Consensus       129 v~f~~~SGSEAve~AlklAr~~tg----------------r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~  192 (464)
T PRK06938        129 IQFCGPTGTDAVEAALKLVKTATG----------------RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQF  192 (464)
T ss_pred             EEEeCCCcHHHHHHHHHHHHHhhC----------------CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEE
Confidence            4565 6999999999999997420                12244444444544333333211            12345


Q ss_pred             EecCCCCC------------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEec
Q psy1596         269 IESDDKLS------------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDA  332 (375)
Q Consensus       269 Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDa  332 (375)
                      +|.....+            .+.+.|++.+++.......+.+|++.---...|.+    +=++++.++|++||+.+++|.
T Consensus       193 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DE  272 (464)
T PRK06938        193 LPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDE  272 (464)
T ss_pred             eCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence            55422211            23677888886422111124445444322233444    348999999999999999999


Q ss_pred             ccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         333 AYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       333 A~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+.|....-.-+.....|+ ..|-+++  -|.++.-++.|++
T Consensus       273 V~tGfGRtG~~~a~e~~gv-~PDiv~~--gKglggG~PlsAv  311 (464)
T PRK06938        273 IQSGFGRTGKMFAFEHAGI-IPDVVVL--SKAIGGSLPLAVV  311 (464)
T ss_pred             cccCCCcCcHHHHHHhcCC-CCCEEEe--eccccCCCceEEE
Confidence            9987644332222222355 4788888  5665544445543

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=97.61  E-value=0.0038  Score=63.91  Aligned_cols=146  Identities=13%  Similarity=0.061  Sum_probs=78.4

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce-EEEecCCCchHHHHHHHHcC-------------CeE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL-VAYCSDQAHSSVEKAGLIGL-------------VKM  266 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~-vV~~S~~aH~Sv~kaa~lg~-------------~~v  266 (375)
                      ...|+++|||||-.|+..||.....+ +.          ..+. +|.....-|-...-++.+.+             ..+
T Consensus       102 ~v~f~~SGseA~e~AlklAr~~~~~~-g~----------~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~  170 (422)
T PRK05630        102 HVFYSDSGSVSVEVAIKMALQYSKGQ-GH----------PERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQ  170 (422)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHHHhc-CC----------CCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCC
Confidence            47899999999999999999864221 00          0122 44455555543333332211             122


Q ss_pred             EEEecCCCCCcCH-------HHHHHHHHHhhhcCCccEEEEEEcC-CCCccc----cccHHHHHHHHHhcCCEEEEeccc
Q psy1596         267 RYIESDDKLSLRG-------DKLIEAIERDKKKHLIPFFVCGTLG-TTGACA----FDNLEELGPICEKEGLWLHVDAAY  334 (375)
Q Consensus       267 ~~Vp~d~~g~md~-------e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGa----vDpl~eI~~ia~~~~iwlHVDaA~  334 (375)
                      ..+|.......+.       +.+++.+..      ...+|++.-. ....|.    -+.+++|.++|++||+.+++|.++
T Consensus       171 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~  244 (422)
T PRK05630        171 IFAPAPPVRGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA  244 (422)
T ss_pred             eEcCCCcccCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce
Confidence            3333221111122       233444432      1334444421 222343    367999999999999999999998


Q ss_pred             ccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         335 AGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       335 gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      .|....-.-+.....++ ..|.+++  -|.+.
T Consensus       245 tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~  273 (422)
T PRK05630        245 TGFGRTGELFATLAAGV-TPDIMCV--GKALT  273 (422)
T ss_pred             eCCCcCchhhHHHhcCC-CCCeeee--echhh
Confidence            76533211111112344 4677765  68763

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=97.58  E-value=0.005  Score=63.78  Aligned_cols=151  Identities=15%  Similarity=0.043  Sum_probs=82.1

Q ss_pred             EEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE-ecCCCchHHHHHHHHcC------------CeEEEE
Q psy1596         203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY-CSDQAHSSVEKAGLIGL------------VKMRYI  269 (375)
Q Consensus       203 vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~------------~~v~~V  269 (375)
                      +++++|||||-.|+..||...                 .+..|+ ....-|-...-++.+.+            ..+..+
T Consensus       125 f~~~SGsEAve~AlklAr~~t-----------------gr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~  187 (459)
T PRK06931        125 FTGPSGADAVEAAIKLAKTYT-----------------GRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFM  187 (459)
T ss_pred             EeCCCcHHHHHHHHHHHHHhc-----------------CCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEe
Confidence            445899999999999999752                 122343 33344433333333321            123444


Q ss_pred             ecCCCCC--------cCHHHHHHHHHHhhh----cCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEecc
Q psy1596         270 ESDDKLS--------LRGDKLIEAIERDKK----KHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAA  333 (375)
Q Consensus       270 p~d~~g~--------md~e~Le~aI~~~~~----~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA  333 (375)
                      |..+..+        -+.+++++.+++...    .+..+.+|++.-.-...|.+    +=+++|.++|++||+.+++|..
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV  267 (459)
T PRK06931        188 PYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEV  267 (459)
T ss_pred             CCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence            4322111        134555444443322    11224444443322333443    3399999999999999999999


Q ss_pred             cccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         334 YAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       334 ~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +.|....-.-+.....|+ ..|-+++  -|.++.-++.|+
T Consensus       268 ~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~a  304 (459)
T PRK06931        268 QAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAV  304 (459)
T ss_pred             hhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcceee
Confidence            987644332222222355 4788887  565544344444

>PRK06917 hypothetical protein; Provisional

Probab=97.57  E-value=0.0067  Score=62.62  Aligned_cols=167  Identities=15%  Similarity=0.014  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|++++.-.                     .....|+++||||+-.|+..||.+...+..           ..+.
T Consensus        77 ~~lae~L~~~~p~~---------------------~~~v~f~~sGsEAve~AlklAr~~~~~rg~-----------t~r~  124 (447)
T PRK06917         77 EKLAKKLSDLSPGD---------------------LNWSFFVNSGSEANETAMKIAIQHFQERGI-----------QGKH  124 (447)
T ss_pred             HHHHHHHHHhCCCC---------------------CCEEEEeCChHHHHHHHHHHHHHHHHhcCC-----------CCCC
Confidence            66777887776321                     135789999999999999999975422100           1122


Q ss_pred             EEE-ecCCCchHHHHHHHHcCC------------eEEEEecCCCCC------------cCHHHHHHHHHHhhhcCCccEE
Q psy1596         244 VAY-CSDQAHSSVEKAGLIGLV------------KMRYIESDDKLS------------LRGDKLIEAIERDKKKHLIPFF  298 (375)
Q Consensus       244 vV~-~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~------------md~e~Le~aI~~~~~~g~~p~~  298 (375)
                      .|+ ....-|-...-++.+.+.            .+..+|.....+            -+.+.|++++++...  ..+.+
T Consensus       125 ~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~--~~iAA  202 (447)
T PRK06917        125 KILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGA--EHIAA  202 (447)
T ss_pred             EEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC--CceEE
Confidence            343 333444333333333221            112222111111            024566777753211  12445


Q ss_pred             EEEEcCCCCcc-cc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         299 VCGTLGTTGAC-AF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       299 Vv~t~GtT~tG-av----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      |++.--....| .+    +=+++|.++|++||+.+++|.++.|....-.-+.....++ ..|-+++  -|.++.
T Consensus       203 vi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~  273 (447)
T PRK06917        203 FIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGA  273 (447)
T ss_pred             EEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhcc
Confidence            55543222223 32    4489999999999999999999987533322221122355 3687766  677654

>KOG3843|consensus

Probab=97.57  E-value=0.00021  Score=68.16  Aligned_cols=122  Identities=21%  Similarity=0.104  Sum_probs=89.7

Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc---cccHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA---FDNLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa---vDpl~eI  317 (375)
                      .|+-.....-|-.|...-.|.+.+.|..   .+.-+-|++++++.|++.-     |-+|.+..-||..-+   -|++++|
T Consensus       105 yiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g-----~dcilci~sttscfapr~pd~leai  179 (432)
T KOG3843|consen  105 YIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELG-----EDCILCIHSTTSCFAPRSPDNLEAI  179 (432)
T ss_pred             EEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhC-----CceEEEEeecccccCCCCCchHHHH
Confidence            4555666777777877767777666653   2456778999999998753     335666666666543   4999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhh---hcCCCcccEEEEcCcccCCCCCccee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKW---LAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~---~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +.||..|+++-+|.-|||.-.   .+.-++   -....+.|.++-+..|.+.+|.|..+
T Consensus       180 aaica~~diphivnnayglqs---ee~i~~iaa~~~~grida~vqsldknf~vpvggai  235 (432)
T KOG3843|consen  180 AAICAAHDIPHIVNNAYGLQS---EECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAI  235 (432)
T ss_pred             HHHHHccCchhhhccccccch---HHHHHHHHHHhhhccHHHHHHHhhhcceeecchhH
Confidence            999999999999999999863   222222   22356889999999999999998654

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=97.55  E-value=0.0044  Score=64.34  Aligned_cols=160  Identities=11%  Similarity=-0.027  Sum_probs=87.5

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhc-----cCC---cchh--hhhcCc-eEEEecCCCchHHHHHHHHcCC-----
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQ-----SHP---ELEH--AEINSR-LVAYCSDQAHSSVEKAGLIGLV-----  264 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~-----~~~---~~~~--~~~~~~-~vV~~S~~aH~Sv~kaa~lg~~-----  264 (375)
                      ...|+++|||||-.|+..||.+.....+.     .+.   ++-.  ....++ .+|-....-|-...-+..+.+.     
T Consensus       124 ~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~  203 (464)
T TIGR00699       124 QVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHK  203 (464)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence            47999999999999999999754211000     000   0000  000012 2444444556555545444321     


Q ss_pred             ------eEEEEecCC-CCC-------------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHH
Q psy1596         265 ------KMRYIESDD-KLS-------------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPI  320 (375)
Q Consensus       265 ------~v~~Vp~d~-~g~-------------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~i  320 (375)
                            ....+|... .+.             -+++.|+++|++.   +..+.+|++.--....|.+-+    +++|.++
T Consensus       204 ~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~l  280 (464)
T TIGR00699       204 LDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI  280 (464)
T ss_pred             cCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence                  111222211 000             1356677777532   122455665544445576766    9999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCC-cccEEEEcCcccC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-YANSIAFNPSKWL  365 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-~aDSi~~d~HK~l  365 (375)
                      |++||+.|++|.++.|....-.-+.....|++ ..|-+++  -|.+
T Consensus       281 c~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~l  324 (464)
T TIGR00699       281 TKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKF  324 (464)
T ss_pred             HHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhh
Confidence            99999999999998775432221222233564 5788776  5655

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK07483 hypothetical protein; Provisional

Probab=97.54  E-value=0.0086  Score=61.75  Aligned_cols=150  Identities=17%  Similarity=0.091  Sum_probs=80.4

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE-ecCCCchHHHHHHHHcC------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY-CSDQAHSSVEKAGLIGL------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~------------~~v~  267 (375)
                      ...|+++|||||-.|+..||.....+ +  .        ..+..|+ ....-|-...-+..+.+            ..+.
T Consensus        92 ~v~f~~sGsEAve~AlklAr~~~~~~-g--~--------~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~  160 (443)
T PRK07483         92 HVYFVSGGSEAVEAALKLARQYFVEI-G--Q--------PQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAH  160 (443)
T ss_pred             EEEEcCCcHHHHHHHHHHHHHHHHhc-C--C--------CCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCE
Confidence            47899999999999999999753211 0  0        0122333 34444543333332221            1123


Q ss_pred             EEecCCCCCc-------------CHHHHHHHHHHhhhcCCccEEEEEEcCCC-Ccccccc----HHHHHHHHHhcCCEEE
Q psy1596         268 YIESDDKLSL-------------RGDKLIEAIERDKKKHLIPFFVCGTLGTT-GACAFDN----LEELGPICEKEGLWLH  329 (375)
Q Consensus       268 ~Vp~d~~g~m-------------d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT-~tGavDp----l~eI~~ia~~~~iwlH  329 (375)
                      .+|....++-             .+++|++++.+..  ...+.+|++.--.. ..|.+-+    +++|.++|++||+.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI  238 (443)
T PRK07483        161 HVSPCYAYREQRAGESDEAYGQRLADELEAKILELG--PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLI  238 (443)
T ss_pred             EeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC--CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEE
Confidence            3332111111             1256666664311  11233444432211 2244432    9999999999999999


Q ss_pred             EecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         330 VDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       330 VDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      +|..+.|....-.-+.....|+ ..|-+++  -|.+.
T Consensus       239 ~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~  272 (443)
T PRK07483        239 LDEVMCGMGRTGTLFACEEDGV-APDLVTI--AKGLG  272 (443)
T ss_pred             EecceeCcccCcHHHHHhhcCC-CCCeeee--hhhhc
Confidence            9999987644322222222355 4787777  56655

>PRK06148 hypothetical protein; Provisional

Probab=97.53  E-value=0.0045  Score=70.11  Aligned_cols=155  Identities=15%  Similarity=0.051  Sum_probs=86.4

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHc----------C--CeEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG----------L--VKMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg----------~--~~v~~  268 (375)
                      ...|+.+|||||-.|+..||....                ++.+|.....-|-...-+..+.          +  ..+..
T Consensus       682 ~v~f~nSGsEA~e~AlklAr~~tG----------------r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~  745 (1013)
T PRK06148        682 VAFFVNSGSEANSLALRLARAHTG----------------QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEV  745 (1013)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHhcC----------------CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceE
Confidence            468999999999999999997521                1123333333342222221111          0  12222


Q ss_pred             EecCCCC--Cc---C-------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEec
Q psy1596         269 IESDDKL--SL---R-------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDA  332 (375)
Q Consensus       269 Vp~d~~g--~m---d-------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDa  332 (375)
                      ++..+.+  ..   +       .+.++++|+.....+..+.+|++----...|.+-+    +++|.++|++||+.+++|.
T Consensus       746 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DE  825 (1013)
T PRK06148        746 AEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADE  825 (1013)
T ss_pred             cCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence            2211111  11   1       24577777543223334556665543334465544    9999999999999999999


Q ss_pred             ccccCcccch-hhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         333 AYAGSSFICP-EFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       333 A~gg~~~~~~-~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+.|...... -+.....|+ ..|-+++  -|.++.-++.|++
T Consensus       826 VqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav  865 (1013)
T PRK06148        826 VQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAV  865 (1013)
T ss_pred             cccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEE
Confidence            9976543322 111122355 4788877  6776654555543

>PRK05965 hypothetical protein; Provisional

Probab=97.52  E-value=0.011  Score=61.26  Aligned_cols=151  Identities=13%  Similarity=0.013  Sum_probs=83.2

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~  268 (375)
                      ...|+++|||||-.|+..||.....+ +.  +       .++.+|.....-|-...-+..+.+            ..+..
T Consensus       109 ~v~f~~sGSEAve~AlKlAr~~~~~~-g~--~-------~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~  178 (459)
T PRK05965        109 HVYFTLGGSDAVDSAVRFIRHYWNAT-GR--P-------SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHK  178 (459)
T ss_pred             EEEEeCChhHHHHHHHHHHHHHHHhc-CC--C-------CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEE
Confidence            57999999999999999999864211 00  0       012234444444543332322211            11233


Q ss_pred             EecCCCCC----cC--------HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEec
Q psy1596         269 IESDDKLS----LR--------GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDA  332 (375)
Q Consensus       269 Vp~d~~g~----md--------~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDa  332 (375)
                      +|.....+    -|        +++|++.|++...  ..+.+|++.--....|.+    +=+++|.++|++||+.|++|.
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DE  256 (459)
T PRK05965        179 IPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGA--DNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADE  256 (459)
T ss_pred             cCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC--CceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence            43211111    13        2567777754211  224455554332333443    458999999999999999999


Q ss_pred             ccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         333 AYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       333 A~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      .+.|+.....-+.....|+ ..|-+++  -|.+.
T Consensus       257 V~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~  287 (459)
T PRK05965        257 VITGFGRTGPLFACEAEGV-VPDLMTV--AKGLT  287 (459)
T ss_pred             hhccCccCchhhhHhhcCC-CCCeEEe--chhhc
Confidence            9988744332222222355 4788887  45544

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=97.44  E-value=0.0031  Score=64.74  Aligned_cols=152  Identities=14%  Similarity=0.013  Sum_probs=81.8

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~  267 (375)
                      ...|+.+||+||-.|+..||.....+.+   +       .++.+|.....-|-...-+..+.+             ..+.
T Consensus       106 ~v~f~~sGseAve~AlklAr~~~~~~g~---~-------~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~  175 (429)
T PRK06173        106 KIFFADSGSVAVEVAMKMALQYQQAKGE---V-------QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQY  175 (429)
T ss_pred             EEEEeCCchHHHHHHHHHHHHHHHHhCC---C-------CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCe
Confidence            5799999999999999999975322100   0       012233444444533222222211             1123


Q ss_pred             EEecCCC------CCcCHHHHHHHHHHhhhcCCccEEEEEEcC-CCCcccc----ccHHHHHHHHHhcCCEEEEeccccc
Q psy1596         268 YIESDDK------LSLRGDKLIEAIERDKKKHLIPFFVCGTLG-TTGACAF----DNLEELGPICEKEGLWLHVDAAYAG  336 (375)
Q Consensus       268 ~Vp~d~~------g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg  336 (375)
                      .+|....      ..-+.+.|++.|+..   +..+.+|++.-. ....|.+    +=+++|.++|++||+.+++|.++.|
T Consensus       176 ~~~~p~~~~~~~~~~~~l~~l~~~i~~~---~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG  252 (429)
T PRK06173        176 FLPQPSIKFGEEWNDEAIEPLQDLLEQK---GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATG  252 (429)
T ss_pred             EeCCCCcccchhHHHHHHHHHHHHHHhC---CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcC
Confidence            3332110      012466777888632   223444444432 2333443    4599999999999999999999966


Q ss_pred             CcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         337 SSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       337 ~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ....-.-+.....|+ ..|.++  .-|.++.-
T Consensus       253 ~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG  281 (429)
T PRK06173        253 FGRTGKLFALEHAGV-VPDIMC--IGKALTGG  281 (429)
T ss_pred             CCcCCcchHHHhcCC-CCCEEE--eehhhhCC
Confidence            422211111112355 478777  57776433

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=97.35  E-value=0.0035  Score=64.28  Aligned_cols=152  Identities=12%  Similarity=0.022  Sum_probs=80.0

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCe-EE----------EE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVK-MR----------YI  269 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~-v~----------~V  269 (375)
                      ...|+.+|||||-.|+..||....++.+..+...    -.++.+|-....-|-...-++.+.+.. .+          .+
T Consensus       105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~----~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~  180 (431)
T TIGR03251       105 HLFFIEGGALAVENALKTAFDWKSRHNQARGIPA----ALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRI  180 (431)
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCC----CCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccC
Confidence            4789999999999999999975311000000000    001224444444454444443332211 00          01


Q ss_pred             ec-------CCCC-C-------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEE
Q psy1596         270 ES-------DDKL-S-------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLHV  330 (375)
Q Consensus       270 p~-------d~~g-~-------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHV  330 (375)
                      +.       +... .       -+++++++.++.   .+..+.+|++.--....|.+    +-+++|.++|++||+.|++
T Consensus       181 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~  257 (431)
T TIGR03251       181 DNPKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIF  257 (431)
T ss_pred             CCCcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence            10       0000 0       123444555542   12345666666544445554    6799999999999999999


Q ss_pred             ecccccCcccchhhhhhhcCCCcccEEEEc
Q psy1596         331 DAAYAGSSFICPEFRKWLAGVEYANSIAFN  360 (375)
Q Consensus       331 DaA~gg~~~~~~~~~~~~~gie~aDSi~~d  360 (375)
                      |.++.|....-.-+.....|+ ..|.+++.
T Consensus       258 DEV~tG~GrtG~~~a~~~~gv-~PDi~~~g  286 (431)
T TIGR03251       258 DEVQTGVGLTGTAWAYQQLGV-QPDIVAFG  286 (431)
T ss_pred             ecchhccCccchHHHHHhcCC-CCCEEEec
Confidence            999987543211111112344 47877764

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PRK12566 glycine dehydrogenase; Provisional

Probab=97.23  E-value=0.0044  Score=68.86  Aligned_cols=103  Identities=12%  Similarity=-0.045  Sum_probs=68.2

Q ss_pred             eEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ..+++|+..|......++    ..|.+++.           ++|++.+.++      .+.|+++.++ ..|.|.|+++|+
T Consensus       169 ~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~~~------~~~v~vq~P~-~~G~i~d~~~i~  230 (954)
T PRK12566        169 NRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAAHA------VFGALLQYPD-THGEIRDLRPLI  230 (954)
T ss_pred             CEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCCCC------EEEEEEECCC-CceEEccHHHHH
Confidence            368999999988776653    23445443           3344433222      5678888874 689999999999


Q ss_pred             HHHHhcCCEEEEecccccC--cccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         319 PICEKEGLWLHVDAAYAGS--SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~--~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      +++++.|..+. +++--.+  .+-.|       |=-.||-+ +.-++-+++|++-|
T Consensus       231 ~~~h~~gal~~-~~~d~laL~ll~~P-------ge~GADI~-vG~~Q~fGvp~~~G  277 (954)
T PRK12566        231 DQLHGQQALAC-VAADLLSLLVLTPP-------GELGADVV-LGSTQRFGVPMGYG  277 (954)
T ss_pred             HHHHHcCCEEE-EEeCHHHHhCCCCh-------hhcCCcEE-eeCCCcCCCCCCCC
Confidence            99999998744 5543332  22222       11147877 77788889998866

>PRK08297 L-lysine aminotransferase; Provisional

Probab=97.15  E-value=0.0096  Score=61.41  Aligned_cols=156  Identities=13%  Similarity=0.024  Sum_probs=82.1

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCe-E----------EE
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVK-M----------RY  268 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~-v----------~~  268 (375)
                      ....|+++|||||-.|+..||.+...+....+...  .  .++.+|-....-|-...-+..+.+.. .          ..
T Consensus       111 ~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~--~--~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~  186 (443)
T PRK08297        111 PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDP--A--LGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPR  186 (443)
T ss_pred             CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCC--C--CCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccc
Confidence            35799999999999999999875321100000000  0  01224444444454444343333210 0          01


Q ss_pred             EecC-CCC---C-----------cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEE
Q psy1596         269 IESD-DKL---S-----------LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPICEKEGLWLH  329 (375)
Q Consensus       269 Vp~d-~~g---~-----------md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlH  329 (375)
                      +|.. ..+   .           -+++++++.|.+.   +..+.+|++.---...|.+    +-+++|.++|++||+.++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI  263 (443)
T PRK08297        187 IDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERH---PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLI  263 (443)
T ss_pred             cCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhC---CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence            1110 000   0           0234556666532   2235566655433344554    779999999999999999


Q ss_pred             EecccccCcccchhhhhhhcCCCcccEEEEcCcccC
Q psy1596         330 VDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWL  365 (375)
Q Consensus       330 VDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l  365 (375)
                      +|..+.|....-.-+.....++ ..|-+++  -|.+
T Consensus       264 ~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l  296 (443)
T PRK08297        264 FDEVQTGVGLTGTAWAYQQLGV-RPDIVAF--GKKT  296 (443)
T ss_pred             EechhhccCccchHHHHHhcCC-CCCEEEe--cccc
Confidence            9999977533211111112244 4687775  6654

>KOG1358|consensus

Probab=97.01  E-value=0.003  Score=63.23  Aligned_cols=117  Identities=8%  Similarity=0.044  Sum_probs=84.7

Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhh----hcCC---ccEEEEEEcCCCCccccccH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDK----KKHL---IPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~----~~g~---~p~~Vv~t~GtT~tGavDpl  314 (375)
                      ++++++.+..+..+.++.++..-.++....+     |++.||+.+.+..    ++.+   .-.+||+..-.-++|.+-|+
T Consensus       178 GDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl  252 (467)
T KOG1358|consen  178 GDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPL  252 (467)
T ss_pred             CcEEEEehhhhHHHHHHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCccccc
Confidence            5689999999999999999988888888765     7788887774422    2222   13467777777889999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccch--h-hhhhhcCCCcccEEEEcCcc
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICP--E-FRKWLAGVEYANSIAFNPSK  363 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~-~~~~~~gie~aDSi~~d~HK  363 (375)
                      .+|.++..||...+++|..|..+.+-.-  . -.|.--+++..|-++.+.--
T Consensus       253 ~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~  304 (467)
T KOG1358|consen  253 PEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMET  304 (467)
T ss_pred             HHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccc
Confidence            9999999999999999999988754210  0 01111234556777666543

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=96.92  E-value=0.036  Score=57.10  Aligned_cols=143  Identities=15%  Similarity=0.044  Sum_probs=81.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|+++..-.                    +=....||+|||+|+=+|+..++++...+-+           ..+-
T Consensus        90 ~~LA~~L~~~aP~~--------------------~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~-----------p~r~  138 (449)
T COG0161          90 IELAEKLAELAPEG--------------------GLDHVFFTDSGSEAVETALKMALQYWRARGQ-----------PQRK  138 (449)
T ss_pred             HHHHHHHHHhCCCC--------------------CccEEEEeCCchHHHHHHHHHHHHHHHhcCC-----------Ccce
Confidence            66777788876511                    1135799999999999999999987644211           1122


Q ss_pred             EEEec-CCCchHHHHHHHHcC-------------CeEEEEecCC------CCCcC------HHHHHHHHHHhhhcCCccE
Q psy1596         244 VAYCS-DQAHSSVEKAGLIGL-------------VKMRYIESDD------KLSLR------GDKLIEAIERDKKKHLIPF  297 (375)
Q Consensus       244 vV~~S-~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~------~g~md------~e~Le~aI~~~~~~g~~p~  297 (375)
                      .++.= ..-|-+..-++.+++             ..+..+|.-.      .+.-+      .++||+.|.+.-.  ....
T Consensus       139 ~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~--~~IA  216 (449)
T COG0161         139 KFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGP--ETIA  216 (449)
T ss_pred             EEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCc--ccEE
Confidence            23333 333544444444433             1122333211      11122      4566666665321  1233


Q ss_pred             EEEEEcCCCC-cccc----ccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596         298 FVCGTLGTTG-ACAF----DNLEELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       298 ~Vv~t~GtT~-tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                      ++++-----. .|.+    .=++++.+||++||+.|+.|..-.|+..
T Consensus       217 AfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGR  263 (449)
T COG0161         217 AFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGR  263 (449)
T ss_pred             EEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCc
Confidence            3333321112 3333    2399999999999999999998877654

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=96.76  E-value=0.0091  Score=58.12  Aligned_cols=89  Identities=16%  Similarity=0.164  Sum_probs=61.8

Q ss_pred             CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcc--cchhhhhhhc
Q psy1596         275 LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSF--ICPEFRKWLA  349 (375)
Q Consensus       275 g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~--~~~~~~~~~~  349 (375)
                      +++|.++|+--  +.      .-+|+++-+|++||.|   +.+..|.++|++||+++++|-|||-..-  +..+......
T Consensus       167 Y~vDF~~l~i~--e~------~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~  238 (417)
T COG3977         167 YHVDFEHLHIG--ES------TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWN  238 (417)
T ss_pred             eccCHHHcccc--cc------cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCC
Confidence            56787777532  22      3389999999999998   6788888999999999999999998642  1111111111


Q ss_pred             CCCcccEEEEcCcccCCCCCcceee
Q psy1596         350 GVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       350 gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .   ---.|+|..|.++----||++
T Consensus       239 ~---NiilC~SLSK~GLPG~R~GIi  260 (417)
T COG3977         239 E---NIILCMSLSKLGLPGSRCGII  260 (417)
T ss_pred             C---CEEEEeehhhcCCCCcceeEE
Confidence            1   134688999977655667764

>KOG2467|consensus

Probab=96.72  E-value=0.0094  Score=59.37  Aligned_cols=171  Identities=14%  Similarity=0.044  Sum_probs=107.9

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEe--CChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQ--TTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvft--sGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .+++|.-+.+.--++||++                    +..|||-+  -+||-||+..-.+..... .    +      
T Consensus        84 ID~iE~LCq~RALeaF~ld--------------------p~kWGVNVQp~SGSPANfavYtall~Ph-~----R------  132 (477)
T KOG2467|consen   84 IDQIELLCQKRALEAFGLD--------------------PEKWGVNVQPYSGSPANFAVYTALLKPH-E----R------  132 (477)
T ss_pred             HHHHHHHHHHHHHHHhCCC--------------------HHHCceeeccCCCCchhhHHHhhhcCCC-C----e------
Confidence            4566777888888999998                    23445543  488999987665543211 0    0      


Q ss_pred             hhhcCceEEEecCCCchHHHHH---HHHcCC----eEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKA---GLIGLV----KMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA  308 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~ka---a~lg~~----~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t  308 (375)
                           -+-+-.++-.|.|---.   -.+...    +-.+..+| ..|-+|-|.||+.-...     +|.++|  +|++..
T Consensus       133 -----iMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f-----rPk~ii--aG~SaY  200 (477)
T KOG2467|consen  133 -----IMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLF-----RPKLII--AGTSAY  200 (477)
T ss_pred             -----eeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhc-----CCcEEE--eccccc
Confidence                 01122333344332111   011111    11122344 57899999999876543     365554  466777


Q ss_pred             cccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         309 CAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       309 GavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      .-.-|...+.+||.+.|.+|.+|-||-.+.....   ..-..+|+||-|+...||.|-.|-+.=+||
T Consensus       201 ~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~---vipsPFey~DiVTTTTHKsLRGPRg~mIFy  264 (477)
T KOG2467|consen  201 SRLIDYARFRKIADKVGAYLMADMAHISGLVAAG---VIPSPFEYCDIVTTTTHKSLRGPRGAMIFY  264 (477)
T ss_pred             hhhccHHHHHHHHHhcCceeehhhhhHHHHHhcc---cCCCcccccceeeccccccccCCcceeEEE
Confidence            7777899999999999999999999855432111   011246899999999999999998765554

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=96.71  E-value=0.021  Score=57.48  Aligned_cols=147  Identities=10%  Similarity=0.001  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      -++.+.+++++|.+.                      .-++..|-|.-|++--..++....+-.+. ..-|..   .++.
T Consensus        72 pe~r~l~a~llgv~~----------------------~~viv~gNSSL~lM~d~i~~a~~~G~~~~-~~PW~~---~~~v  125 (425)
T PF12897_consen   72 PEARELFAELLGVPP----------------------ENVIVGGNSSLNLMHDTISRAMLHGVPGS-ETPWCK---EEKV  125 (425)
T ss_dssp             HHHHHHHHHHHTS-G----------------------GGEEE-SS-HHHHHHHHHHHHHHH--TT--SS-GGG---SS--
T ss_pred             HHHHHHHHHHhCCCH----------------------HHEEEeccchHHHHHHHHHHHHhcCCCCC-CCCchh---ccCc
Confidence            678999999999983                      12555555555555444444433221111 011211   2456


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~i  320 (375)
                      ..+|+...+---..-+...|.+.+.||.+++| .|+|.+|+.+.+|..-  +-+.+|.+ -+|++|.+   +-+++++.+
T Consensus       126 KfLCPvPGYDRHFai~E~~Giemi~VpM~~dG-PDmD~Ve~LV~~D~sv--KGiWcVP~-ySNPtG~tySde~vrrlA~m  201 (425)
T PF12897_consen  126 KFLCPVPGYDRHFAITEHFGIEMIPVPMTEDG-PDMDMVEELVAEDPSV--KGIWCVPK-YSNPTGITYSDEVVRRLAAM  201 (425)
T ss_dssp             EEEEEES--HHHHHHHHHCT-EEEEEEEETTE-E-HHHHHHHTHTSTTE--EEEEE-SS-S-TTT-----HHHHHHHHHS
T ss_pred             eEEecCCCchHHHHHHHhhCcEEEecCCCCCC-CCHHHHHHHHhcCCcc--ceEEeCCC-ccCCCCccCCHHHHHHHhcC
Confidence            78999888666666667789999999998888 8999999999876542  11244444 46888887   446666666


Q ss_pred             -HHhcCCEEEEecccccCccc
Q psy1596         321 -CEKEGLWLHVDAAYAGSSFI  340 (375)
Q Consensus       321 -a~~~~iwlHVDaA~gg~~~~  340 (375)
                       ....++.|.=|-||+...+.
T Consensus       202 ~~AA~DFRI~WDNAY~vHhL~  222 (425)
T PF12897_consen  202 KTAAPDFRIFWDNAYAVHHLY  222 (425)
T ss_dssp             --SSTT-EEEEE-TTTT-BSS
T ss_pred             CcCCcCeEEEeecCceEeecc
Confidence             34579999999999998774

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>KOG0633|consensus

Probab=96.61  E-value=0.0064  Score=58.13  Aligned_cols=90  Identities=18%  Similarity=0.062  Sum_probs=69.3

Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+.-..+++-..-.+.+.++.++.+|.+.++.||+|++-+.++.+.+    +.++.+|.+.+++|++-..+.|-+|.+-
T Consensus       113 KIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~----iK~~F~tSPgNPtg~~ik~~di~KiLe~  188 (375)
T KOG0633|consen  113 KILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSK----IKCIFLTSPGNPTGSIIKEDDILKILEM  188 (375)
T ss_pred             ceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhcccc----ceEEEEcCCCCCCcccccHHHHHHHHhC
Confidence            455444543222223457788999999999999999999999988754    6789999999999999777777777765


Q ss_pred             c-CCEEEEecccccC
Q psy1596         324 E-GLWLHVDAAYAGS  337 (375)
Q Consensus       324 ~-~iwlHVDaA~gg~  337 (375)
                      - |..+.||.||--+
T Consensus       189 p~nglVVvDEAYidF  203 (375)
T KOG0633|consen  189 PDNGLVVVDEAYIDF  203 (375)
T ss_pred             CCCcEEEEeeeeEee
Confidence            3 7889999998543

>KOG1401|consensus

Probab=96.34  E-value=0.12  Score=52.19  Aligned_cols=127  Identities=17%  Similarity=0.088  Sum_probs=79.0

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCC------------eEE
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLV------------KMR  267 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~  267 (375)
                      ....|..+||+||-.||..||.....+.    +.   +   +--+|..-..-|--..-++...+.            .+.
T Consensus       117 ~rvff~nsGTeAne~ALK~Ark~~~~~~----~~---~---~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~  186 (433)
T KOG1401|consen  117 ERVFFCNSGTEANETALKFARKFTGKKH----PE---K---KTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVV  186 (433)
T ss_pred             cEEEEecCCcHHHHHHHHHHHHhhcccC----Cc---c---ceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCcee
Confidence            4588999999999999999997542211    10   0   112455555555433333332111            112


Q ss_pred             EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--cc--HHHHHHHHHhcCCEEEEecccccCcccchh
Q psy1596         268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--DN--LEELGPICEKEGLWLHVDAAYAGSSFICPE  343 (375)
Q Consensus       268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--Dp--l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~  343 (375)
                      ..+.     -|+.+|++.++.....   ..+|++--..-.-|.+  ||  +..|..+|+++++.|+-|..+.|.....+.
T Consensus       187 ~~~y-----nd~t~l~k~~~~h~~~---IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~  258 (433)
T KOG1401|consen  187 TAEY-----NDSTALEKLFESHKGE---IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYG  258 (433)
T ss_pred             eccc-----CCHHHHHHHHHhCCCc---eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchH
Confidence            2222     2689999999875421   4456666555455544  44  788999999999999999999886555443


Q ss_pred             h
Q psy1596         344 F  344 (375)
Q Consensus       344 ~  344 (375)
                      .
T Consensus       259 ~  259 (433)
T KOG1401|consen  259 W  259 (433)
T ss_pred             H
Confidence            3

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=96.06  E-value=0.22  Score=50.02  Aligned_cols=149  Identities=11%  Similarity=0.037  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE---eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF---QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf---tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      +.+.+-.++.||.+         +              .++   -.+||-|+.++|.....                   
T Consensus        57 d~le~iyA~vfgaE---------~--------------ALVRpq~vSGTHAi~~~Lfg~Lr-------------------   94 (403)
T PF06838_consen   57 DKLERIYADVFGAE---------D--------------ALVRPQFVSGTHAIALALFGVLR-------------------   94 (403)
T ss_dssp             HHHHHHHHHHCT-S---------E--------------EEEETTS-SHHHHHHHHHHHH---------------------
T ss_pred             HHHHHHHHHHhCch---------h--------------hhhcccccchHHHHHHHHHhcCC-------------------
Confidence            45556688999887         1              222   14789999888876543                   


Q ss_pred             Cce-EEEecCCCchHHHHHHHH----------cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc--CCC-
Q psy1596         241 SRL-VAYCSDQAHSSVEKAGLI----------GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL--GTT-  306 (375)
Q Consensus       241 ~~~-vV~~S~~aH~Sv~kaa~l----------g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~--GtT-  306 (375)
                      |++ .++++..-+-.+.+..-+          .|++.+.||..++|.+|.+.++++|++.++      +|...=  |-+ 
T Consensus        95 pGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk------~v~IQRSrGYs~  168 (403)
T PF06838_consen   95 PGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPNTK------MVLIQRSRGYSW  168 (403)
T ss_dssp             TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEE------EEEEE-S-TTSS
T ss_pred             CCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhccCce------EEEEecCCCCCC
Confidence            223 344555556666666522          256789999999999999999999986543      444332  222 


Q ss_pred             -CccccccHHHHHHHHHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         307 -GACAFDNLEELGPICEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       307 -~tGavDpl~eI~~ia~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                       ..=.++.|++++++.|+.  ++++.||-+||=+.-...   ..--   .||-+.=|.=|..+
T Consensus       169 R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~E---P~~v---GADl~aGSLIKNpG  225 (403)
T PF06838_consen  169 RPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQE---PTEV---GADLMAGSLIKNPG  225 (403)
T ss_dssp             S----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS----GGGG---T-SEEEEETTSGGG
T ss_pred             CCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccC---cccc---chhheeccceeCCC
Confidence             223568899999988875  789999999998642211   1112   47999999998754

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>KOG1404|consensus

Probab=95.95  E-value=0.039  Score=55.45  Aligned_cols=121  Identities=12%  Similarity=-0.018  Sum_probs=71.8

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec---------
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES---------  271 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---------  271 (375)
                      ...|+++|||||=+||+.||.+...                -..|-....-|-+-.-++-+.+...++-+.         
T Consensus       111 ~vfF~nsGsEANelal~mar~Yt~~----------------~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~  174 (442)
T KOG1404|consen  111 VVFFVNSGSEANELALKMARLYTGN----------------LDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHH  174 (442)
T ss_pred             EEEEecCCchHHHHHHHHHHHhcCC----------------ceEEEeeccccCCchhhcccccCCcccccCCCCCCcccc
Confidence            4799999999999999999986311                123333444454444444443322221111         


Q ss_pred             ----C--------CC----CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEe
Q psy1596         272 ----D--------DK----LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVD  331 (375)
Q Consensus       272 ----d--------~~----g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVD  331 (375)
                          |        ++    +.--.+.|+..|..+....  +.+.++..-....|.+.+    +++..++|+++|..++.|
T Consensus       175 ~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~--vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaD  252 (442)
T KOG1404|consen  175 TMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPET--VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIAD  252 (442)
T ss_pred             cCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCc--eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEeh
Confidence                1        00    0001244555555554432  334444433334477764    899999999999999999


Q ss_pred             cccccCcc
Q psy1596         332 AAYAGSSF  339 (375)
Q Consensus       332 aA~gg~~~  339 (375)
                      .++.|...
T Consensus       253 EVqtGfGR  260 (442)
T KOG1404|consen  253 EVQTGFGR  260 (442)
T ss_pred             hhhhcccc
Confidence            99988654

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=95.74  E-value=0.59  Score=51.95  Aligned_cols=80  Identities=10%  Similarity=0.004  Sum_probs=46.8

Q ss_pred             HHHHHHHHHhh--hcCCccEEEEEEcC-CCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC
Q psy1596         280 DKLIEAIERDK--KKHLIPFFVCGTLG-TTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE  352 (375)
Q Consensus       280 e~Le~aI~~~~--~~g~~p~~Vv~t~G-tT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie  352 (375)
                      +.|++.|++..  +.+....+|++.-. ....|.+    +=+++|.++|++||+.|+.|..+.|+...-..+.....|+ 
T Consensus       567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv-  645 (817)
T PLN02974        567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC-  645 (817)
T ss_pred             HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence            45666665421  11223444444321 1223444    3389999999999999999999998755433322223344 


Q ss_pred             cccEEEEc
Q psy1596         353 YANSIAFN  360 (375)
Q Consensus       353 ~aDSi~~d  360 (375)
                      ..|.+++.
T Consensus       646 ~PDIi~~g  653 (817)
T PLN02974        646 KPDIACYA  653 (817)
T ss_pred             CCCEEeec
Confidence            36776664

>KOG1402|consensus

Probab=95.00  E-value=0.13  Score=50.86  Aligned_cols=132  Identities=17%  Similarity=0.170  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      -+..+.+.++||++.                       .+=+.+|.||+=+|+..||.+.....          ++..+.
T Consensus       104 ~~f~~~vt~lf~~~k-----------------------vlpmnTGaEa~Eta~KLaR~wgy~~K----------~ip~nk  150 (427)
T KOG1402|consen  104 GEFAEYVTKLFGYDK-----------------------VLPMNTGAEAVETACKLARKWGYRKK----------NIPKNK  150 (427)
T ss_pred             HHHHHHHHHhcCcce-----------------------eeecccchhHHHHHHHHHHHHHHhhc----------cCCccc
Confidence            566788999999982                       23466779999999999996532211          011011


Q ss_pred             --EEEecCCCch-------------HHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596         244 --VAYCSDQAHS-------------SVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA  308 (375)
Q Consensus       244 --vV~~S~~aH~-------------Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t  308 (375)
                        ++.+-..-|-             |..+---+.-..+..||-+     |.++|+.+++...   ..-|+|=...|  +.
T Consensus       151 a~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~l~~~~---vaaFivEPIQG--Ea  220 (427)
T KOG1402|consen  151 AKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEALEVALKSPN---VAAFIVEPIQG--EA  220 (427)
T ss_pred             eeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-----CHHHHHHHhcCCC---eeEEEeecccc--cc
Confidence              1111112221             2211110111125566654     8899999998631   12233333333  56


Q ss_pred             cccc----cHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         309 CAFD----NLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       309 GavD----pl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      |.+-    -|++..++|.+||+.++.|..+.|-+
T Consensus       221 GVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~  254 (427)
T KOG1402|consen  221 GVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLA  254 (427)
T ss_pred             ceEeCCchhHHHHHHHHHhhcEEEEehhhhhccc
Confidence            6662    39999999999999999999998854

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=93.67  E-value=3.7  Score=41.56  Aligned_cols=146  Identities=12%  Similarity=-0.004  Sum_probs=94.4

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec-C-CCCCc
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES-D-DKLSL  277 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d-~~g~m  277 (375)
                      ..++=|.|||-|+-++.-.....                 .++..|++|+++......-..-.|.++..-|- | +...+
T Consensus        95 v~t~Qt~GGTGAL~~~A~fl~~~-----------------~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~  157 (396)
T COG1448          95 VATVQTLGGTGALRVAADFLARF-----------------FPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGL  157 (396)
T ss_pred             HhheecCCcchHHHHHHHHHHHh-----------------CCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccc
Confidence            45678899999987665443321                 13446999999865444333456778887775 3 34459


Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccchh----hhhhhcC
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICPE----FRKWLAG  350 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~----~~~~~~g  350 (375)
                      |.+.+-..|++..+ |.  +++.=-+..|+||.-   +..++|+++.++.++.-.+|=||=|++-=..+    .|.....
T Consensus       158 df~~mla~L~~a~~-~~--vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~  234 (396)
T COG1448         158 DFDGMLADLKTAPE-GS--VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEV  234 (396)
T ss_pred             cHHHHHHHHHhCCC-CC--EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHh
Confidence            99999888887543 22  233333356788864   67889999999999999999999776432221    1222222


Q ss_pred             CCcccEEEEcCcccCC
Q psy1596         351 VEYANSIAFNPSKWLM  366 (375)
Q Consensus       351 ie~aDSi~~d~HK~l~  366 (375)
                      .. -=.++.|+.|.++
T Consensus       235 ~~-~~lva~S~SKnfg  249 (396)
T COG1448         235 GP-ELLVASSFSKNFG  249 (396)
T ss_pred             CC-cEEEEehhhhhhh
Confidence            11 1457778888654

>KOG1405|consensus

Probab=91.33  E-value=0.64  Score=46.52  Aligned_cols=83  Identities=16%  Similarity=0.118  Sum_probs=53.5

Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEc----CCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC-
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTL----GTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-  352 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~----GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-  352 (375)
                      .++.+|+.|.+..++......+++.-    |.-..++-|=+..+.+|+++|++-++||..+-|+...-.-+.|-..+++ 
T Consensus       254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~  333 (484)
T KOG1405|consen  254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS  333 (484)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence            45678888887765544444444433    3333445577999999999999999999999776543222222222332 


Q ss_pred             cccEEEEc
Q psy1596         353 YANSIAFN  360 (375)
Q Consensus       353 ~aDSi~~d  360 (375)
                      -+|.+||+
T Consensus       334 PpD~vTFS  341 (484)
T KOG1405|consen  334 PPDVVTFS  341 (484)
T ss_pred             Cccceehh
Confidence            26777776

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=90.43  E-value=0.66  Score=41.04  Aligned_cols=46  Identities=9%  Similarity=0.212  Sum_probs=35.2

Q ss_pred             cchhHHHHHHHHHHHHHcC--CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHH
Q psy1596         157 LDRDKYSSKVLDFVSKENA--TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRT  221 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG--~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~  221 (375)
                      .|..++++++.+|+.+.+|  .+.                   ++...++|+|++.++..++.+..+
T Consensus        92 ~G~~~lR~AiA~~l~~~~g~~v~~-------------------~pd~Ivvt~Ga~~al~~l~~~l~d  139 (153)
T PLN02994         92 HGLANFRKAIANFMAEARGGRVKF-------------------DADMIVLSAGATAANEIIMFCIAD  139 (153)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCcc-------------------chhheEEcCCHHHHHHHHHHHHcC
Confidence            4677788999999999988  332                   334689999999998877766543

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=90.17  E-value=3.3  Score=40.77  Aligned_cols=88  Identities=14%  Similarity=0.154  Sum_probs=61.5

Q ss_pred             EEEecCCCchHHHHHHHH----------cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCC-----Cc
Q psy1596         244 VAYCSDQAHSSVEKAGLI----------GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT-----GA  308 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~l----------g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT-----~t  308 (375)
                      .+++...-+-.+++..-+          .++.-+.||...+|++|.+.++.+|++.++       ++..--+.     +.
T Consensus       110 ll~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~~tk-------li~IQRS~GY~~RpS  182 (416)
T COG4100         110 LLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISDRTK-------LIGIQRSKGYAWRPS  182 (416)
T ss_pred             EEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcCccce-------EEEEEeccCcCCCCc
Confidence            355555555666665422          245678889888999999999999987653       33332222     23


Q ss_pred             cccccHHHHHHHHHhc--CCEEEEecccccCc
Q psy1596         309 CAFDNLEELGPICEKE--GLWLHVDAAYAGSS  338 (375)
Q Consensus       309 GavDpl~eI~~ia~~~--~iwlHVDaA~gg~~  338 (375)
                      =.+++|+++..+.|+-  |+.+.||-+||-+.
T Consensus       183 ~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFv  214 (416)
T COG4100         183 LSIAEIEEMITFVKEINPNVIVFVDNCYGEFV  214 (416)
T ss_pred             ccHHHHHHHHHHHHhcCCCEEEEEeccchhhh
Confidence            4578899999888875  68999999999863

>KOG2040|consensus

Probab=86.31  E-value=13  Score=40.30  Aligned_cols=108  Identities=11%  Similarity=-0.027  Sum_probs=61.0

Q ss_pred             EEEecCCCchHHHHHHH--HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL--IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~--lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      .++++...|.-....++  -.+..+. |.+     .|+   +++-...    .....|++..+.| .|.+-+.+++++.+
T Consensus       207 k~vvd~~~hpqtlsV~~TRa~~~~i~-v~~-----~~~---~~~~~s~----~~v~gvlvQYP~t-~G~i~d~~el~~~a  272 (1001)
T KOG2040|consen  207 KFVVDSNCHPQTLSVVKTRAKGFGIK-VVV-----SDI---KEADYSS----KDVSGVLVQYPDT-EGSVLDFDELVELA  272 (1001)
T ss_pred             eEEecCCCCcchhhhhhcccccccee-EEe-----cCH---HHhhccc----cceeEEEEEcCCC-CCcccCHHHHHHHh
Confidence            47889999987766654  2232332 211     122   1211111    1245788888865 58999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      ++.+..+.+---.-+-.++-|-      |==.||-..=+... +++|.|-|
T Consensus       273 ~~~~s~vv~atDLLaLtiLrpP------gefGaDIavGSsQR-FGVPlGYG  316 (1001)
T KOG2040|consen  273 HANGSLVVMATDLLALTILRPP------GEFGADIAVGSSQR-FGVPLGYG  316 (1001)
T ss_pred             hccCceEEEeehhhHHHccCCh------hhcCceeeeccccc-cCccccCC
Confidence            9988765432111111111110      11136877777777 46898865

>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]

Probab=82.70  E-value=22  Score=35.09  Aligned_cols=120  Identities=13%  Similarity=0.038  Sum_probs=72.2

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCC
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLS  276 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~  276 (375)
                      .-++|-||.+||.+...+|..+++.               =+.+.++-...-.-..++-    .+.|..++.++...+..
T Consensus        65 dTlvT~GgiQSNh~r~tAavA~~lG---------------l~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~  129 (323)
T COG2515          65 DTLVTYGGIQSNHVRQTAAVAAKLG---------------LKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIG  129 (323)
T ss_pred             cEEEEecccchhHHHHHHHHHHhcC---------------CcEEEEEeccccccccccchhhhhhcCceEEEecCCCChh
Confidence            4699999999999877777654321               1345555444410011111    24577888887655553


Q ss_pred             cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc---cccccHHHHHHHHHh-cCCEEEEecccccC
Q psy1596         277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA---CAFDNLEELGPICEK-EGLWLHVDAAYAGS  337 (375)
Q Consensus       277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t---GavDpl~eI~~ia~~-~~iwlHVDaA~gg~  337 (375)
                      ++. .+++..++-+++|.+|+ |+.--|++..   |-++=..||..-+++ ..+-..|.++=+++
T Consensus       130 ~~~-~~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~g  192 (323)
T COG2515         130 INA-SAEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSGG  192 (323)
T ss_pred             hch-hhHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCcc
Confidence            332 23333344445677885 5666677774   556777888888887 56666777765554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	375
4e1o_A	481	Human Histidine Decarboxylase Complex With Histidin		2e-66
3rbf_A	480	Crystal Structure Of Human Aromatic L-Amino Acid De		1e-60
1js3_A	486	Crystal Structure Of Dopa Decarboxylase In Complex		3e-60
3rch_A	480	Crystal Structure Of Human Aromatic L-Amino Acid De		5e-60
3k40_A	475	Crystal Structure Of Drosophila 3,4-Dihydroxyphenyl		2e-51
3vp6_A	511	Structural Characterization Of Glutamic Acid Decarb		4e-19
2jis_A	515	Human Cysteine Sulfinic Acid Decarboxylase (Csad) I		5e-19
2okj_A	504	The X-Ray Crystal Structure Of The 67kda Isoform Of		5e-19
2okk_A	497	The X-Ray Crystal Structure Of The 65kda Isoform Of		2e-17
2qma_A	497	Crystal Structure Of Glutamate Decarboxylase Domain		1e-11
3f9t_A	397	Crystal Structure Of L-tyrosine Decarboxylase Mfna		6e-04

>pdb|4E1O|A Chain A, Human Histidine Decarboxylase Complex With Histidine Methyl Ester (Hme) Length = 481

Iteration: 1
 Score =  249 bits (636), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 111/173 (64%), Positives = 136/173 (78%)
Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q+T SESTLI LLA R   I + + S P+ + + +N+RLVAY SDQAHSSVEKAGLI 
Sbjct: 149 VLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLIS 208
Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LVKM+++  DD  SLRG+ L +AIE DK++ L+P FVC TLGTTG CAFD L ELGPIC 
Sbjct: 209 LVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDXLSELGPICA 268
Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +EGLWLH+DAAYAG++F+CPEFR +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct: 269 REGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 321

>pdb|3RBF|A Chain A, Crystal Structure Of Human Aromatic L-Amino Acid Decarboxylase (Aadc) In The Apo Form Length = 480

Iteration: 1
 Score =  229 bits (585), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/173 (62%), Positives = 131/173 (75%)
Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q +ASE+TL+ LLA RT+ I + Q + PEL  A I  +LVAY SDQAHSSVE+AGLIG
Sbjct: 143 VIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEKLVAYSSDQAHSSVERAGLIG 202
Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK++ I SD   ++R   L EA+ERDK   LIPFF+  TLGTT  C+FDNL E+GPIC 
Sbjct: 203 GVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFMVATLGTTTCCSFDNLLEVGPICN 262
Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           KE +WLHVDAAYAGS+FICPEFR  L GVE+A+S  FNP KWL+V+FDC+AMW
Sbjct: 263 KEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315

>pdb|1JS3|A Chain A, Crystal Structure Of Dopa Decarboxylase In Complex With The Inhibitor Carbidopa Length = 486

Iteration: 1
 Score =  228 bits (582), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 106/173 (61%), Positives = 131/173 (75%)
Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q +ASE+TL+ LLA RT+ +R+ Q + P L    +  +LVAY SDQAHSSVE+AGLIG
Sbjct: 143 VIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIG 202
Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK++ I SD K ++R   L EA+ERDK   LIPFFV  TLGTT  C+FDNL E+GPIC 
Sbjct: 203 GVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH 262
Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +E +WLHVDAAYAGS+FICPEFR  L GVE+A+S  FNP KWL+V+FDC+AMW
Sbjct: 263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315

>pdb|3RCH|A Chain A, Crystal Structure Of Human Aromatic L-Amino Acid Decarboxylase (Aadc) In The Open Conformation With Llp And Plp Bound To Chain-A And Chain- B Respectively Length = 480

Iteration: 1
 Score =  228 bits (580), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 107/173 (61%), Positives = 130/173 (75%)
Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q +ASE+TL+ LLA RT+ I + Q + PEL  A I  +LVAY SDQAHSSVE+AGLIG
Sbjct: 143 VIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEKLVAYSSDQAHSSVERAGLIG 202
Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK++ I SD   ++R   L EA+ERDK   LIPFF+  TLGTT  C+FDNL E+GPIC 
Sbjct: 203 GVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFMVATLGTTTCCSFDNLLEVGPICN 262
Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           KE +WLHVDAAYAGS+FICPEFR  L GVE+A+S  FNP  WL+V+FDC+AMW
Sbjct: 263 KEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHXWLLVNFDCSAMW 315

>pdb|3K40|A Chain A, Crystal Structure Of Drosophila 3,4-Dihydroxyphenylalanine Decarboxylase Length = 475

Iteration: 1
 Score =  199 bits (507), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 92/173 (53%), Positives = 127/173 (73%), Gaps = 1/173 (0%)
Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q TASESTL+ LL  + + +++ ++ HPE +   I  +LV YCSDQAHSSVE+AGL+G
Sbjct: 143 VIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLG 202
Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK+R ++S++   +RG  L +AIE+D  + LIPF+   TLGTT +CAFD L+E GP+  
Sbjct: 203 GVKLRSVQSENH-RMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGN 261
Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           K  LW+HVDAAYAGS+FICPE+R  + G+E A+S  FNP  W++V+FDC+AMW
Sbjct: 262 KHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHXWMLVNFDCSAMW 314

>pdb|3VP6|A Chain A, Structural Characterization Of Glutamic Acid Decarboxylase; Insights Into The Mechanism Of Autoinactivation Length = 511

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Query: 242 RLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFF 298
           +LV + S+Q+H S++KAG     G   +  I+ +++  +        I   K+K  +PF+
Sbjct: 192 KLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFY 251
Query: 299 VCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIA 358
           V  T GTT   AFD ++E+  ICEK  LWLHVDAA+ G   +  + R  L G+E ANS+ 
Sbjct: 252 VNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVT 311
Query: 359 FNPSKWLMVHFDCTAM 374
           +NP   + V   C+A+
Sbjct: 312 WNPHXMMGVLLQCSAI 327

>pdb|2JIS|A Chain A, Human Cysteine Sulfinic Acid Decarboxylase (Csad) In Complex With Plp. Length = 515

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 229 QSHPELEHAEINSR--LVAYCSDQAHSSVEK-AGLIGLV--KMRYIESDDKLSLRGDKLI 283
           Q +P+ +   + +   L  + S + H S++K A  +GL    +R +++D++  +  + L 
Sbjct: 188 QRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLE 247
Query: 284 EAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPE 343
             I   + +  +PF V  T GTT   AFD LE +  +C++ GLWLHVDAA+ GS  +   
Sbjct: 248 RQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQT 307
Query: 344 FRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374
            R  L G++ A+S+A+NP K L     C+A+
Sbjct: 308 HRHLLDGIQRADSVAWNPHKLLAAGLQCSAL 338

>pdb|2OKJ|A Chain A, The X-Ray Crystal Structure Of The 67kda Isoform Of Glutamic Acid Decarboxylase (Gad67) Length = 504

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Query: 242 RLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFF 298
           +LV + S+Q+H S++KAG     G   +  I+ +++  +        I   K+K  +PF+
Sbjct: 189 KLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFY 248
Query: 299 VCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIA 358
           V  T GTT   AFD ++E+  ICEK  LWLHVDAA+ G   +  + R  L G+E ANS+ 
Sbjct: 249 VNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVT 308
Query: 359 FNPSKWLMVHFDCTAM 374
           +NP   + V   C+A+
Sbjct: 309 WNPHXMMGVLLQCSAI 324

>pdb|2OKK|A Chain A, The X-Ray Crystal Structure Of The 65kda Isoform Of Glutamic Acid Decarboxylase (Gad65) Length = 497

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 242 RLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFF 298
           RL+A+ S+ +H S++K      IG   +  I+ D++  +    L   I   K+K  +PF 
Sbjct: 185 RLIAFTSEHSHFSLKKGAAALGIGTDSVILIKCDERGKMIPSDLERRILEAKQKGFVPFL 244
Query: 299 VCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIA 358
           V  T GTT   AFD L  +  IC+K  +W+HVDAA+ G   +  + +  L+GVE ANS+ 
Sbjct: 245 VSATAGTTVYGAFDPLLAVADICKKYKIWMHVDAAWGGGLLMSRKHKWKLSGVERANSVT 304
Query: 359 FNPSKWLMVHFDCTAM 374
           +NP   + V   C+A+
Sbjct: 305 WNPHXMMGVPLQCSAL 320

>pdb|2QMA|A Chain A, Crystal Structure Of Glutamate Decarboxylase Domain Of Diaminobutyrate-Pyruvate Transaminase And L-2,4-Diaminobutyrate Decarboxylase From Vibrio Parahaemolyticus Length = 497

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 242 RLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFF 298
           +L   CS ++H +V+K+     +G   +  ++++   +    KL E I + K + LIPF 
Sbjct: 202 KLRIVCSKKSHFTVQKSASWXGLGEKAVXTVDANADGTXDITKLDEVIAQAKAEGLIPFA 261
Query: 299 VCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIA 358
           + GT GTT   A D+L+ +     K   W HVD AY G + I    +  L GVE A+SI+
Sbjct: 262 IVGTAGTTDHGAIDDLDFIADXAVKHDXWXHVDGAYGG-ALILSSHKSRLKGVERAHSIS 320
Query: 359 FNPSKWLMVHFDCTAM 374
            +  K       C A+
Sbjct: 321 VDFHKLFYQTISCGAL 336

>pdb|3F9T|A Chain A, Crystal Structure Of L-tyrosine Decarboxylase Mfna (ec 4.1.1.25) (np_247014.1) From Methanococcus Jannaschii At 2.11 A Resolution Length = 397

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 299 VCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAG--SSFICPEFRKWLAGVEY--- 353
           + G  GTT     DN+EEL  I ++  +++HVDAA+ G    F+  +++K   GV Y   
Sbjct: 175 IIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKK--KGVNYKFD 232
Query: 354 ----ANSIAFNPSK 363
                +SI  +P K
Sbjct: 233 FSLGVDSITIDPHK 246

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	375
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	2e-87
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	4e-11
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	2e-86
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	2e-10
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	5e-83
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	7e-11
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	3e-80
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	3e-11
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	3e-79
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	5e-11
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	5e-78
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	5e-13
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	5e-22
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	6e-21
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	8e-21
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	5e-19
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	2e-15
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	6e-12
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	1e-09
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	5e-09

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens} Length = 481

 Score =  271 bits (694), Expect = 2e-87
 Identities = 111/173 (64%), Positives = 136/173 (78%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q+T SESTLI LLA R   I + + S P+ + + +N+RLVAY SDQAHSSVEKAGLI 
Sbjct: 149 VLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLIS 208

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
           LVKM+++  DD  SLRG+ L +AIE DK++ L+P FVC TLGTTG CAFD L ELGPIC 
Sbjct: 209 LVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICA 268

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +EGLWLH+DAAYAG++F+CPEFR +L G+EYA+S  FNPSKW+MVHFDCT  W
Sbjct: 269 REGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 321

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens} Length = 481

 Score = 63.2 bits (154), Expect = 4e-11
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 2   PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELI----THWQSPYMHAYFPALNSYP 57
            V P + P        E+   + D           +I     HWQSP+MHAY+PAL S+P
Sbjct: 33  RVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMHAYYPALTSWP 92

Query: 58  SLLGDMLSDAINCLGFTWVR 77
           SLLGDML+DAINCLGFTW  
Sbjct: 93  SLLGDMLADAINCLGFTWAS 112

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A* Length = 486

 Score =  268 bits (688), Expect = 2e-86
 Identities = 106/173 (61%), Positives = 131/173 (75%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q +ASE+TL+ LLA RT+ +R+ Q + P L    +  +LVAY SDQAHSSVE+AGLIG
Sbjct: 143 VIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK++ I SD K ++R   L EA+ERDK   LIPFFV  TLGTT  C+FDNL E+GPIC 
Sbjct: 203 GVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH 262

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +E +WLHVDAAYAGS+FICPEFR  L GVE+A+S  FNP KWL+V+FDC+AMW
Sbjct: 263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A* Length = 486

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 4/49 (8%)

Query: 31  LRHFAELI----THWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTW 75
           L+   ++I    THW SPY  AYFP  +SYP++L DML  AI C+GF+W
Sbjct: 57  LQDVEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSW 105

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} Length = 475

 Score =  260 bits (665), Expect = 5e-83
 Identities = 92/173 (53%), Positives = 126/173 (72%), Gaps = 1/173 (0%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q TASESTL+ LL  + + +++ ++ HPE +   I  +LV YCSDQAHSSVE+AGL+G
Sbjct: 143 VIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK+R ++  +   +RG  L +AIE+D  + LIPF+   TLGTT +CAFD L+E GP+  
Sbjct: 203 GVKLRSVQ-SENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGN 261

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           K  LW+HVDAAYAGS+FICPE+R  + G+E A+S  FNP KW++V+FDC+AMW
Sbjct: 262 KHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW 314

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} Length = 475

 Score = 62.4 bits (152), Expect = 7e-11
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 2   PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELI----THWQSPYMHAYFPALNSYP 57
            V+P++ P   +    +      +     ++    +I    THW SP  HAYFP  NSYP
Sbjct: 28  RVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYFPTANSYP 87

Query: 58  SLLGDMLSDAINCLGFTW 75
           +++ DMLS AI C+GFTW
Sbjct: 88  AIVADMLSGAIACIGFTW 105

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A* Length = 504

 Score =  253 bits (649), Expect = 3e-80
 Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL-- 260
            F    + S +  ++A R +   + +      +      +LV + S+Q+H S++KAG   
Sbjct: 155 IFSPGGAISNMYSIMAARYKYFPEVKT-----KGMAAVPKLVLFTSEQSHYSIKKAGAAL 209

Query: 261 -IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP 319
             G   +  I+ +++  +        I   K+K  +PF+V  T GTT   AFD ++E+  
Sbjct: 210 GFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIAD 269

Query: 320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           ICEK  LWLHVDAA+ G   +  + R  L G+E ANS+ +NP K + V   C+A+ 
Sbjct: 270 ICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAIL 325

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A* Length = 504

 Score = 63.5 bits (155), Expect = 3e-11
 Identities = 11/78 (14%), Positives = 20/78 (25%), Gaps = 15/78 (19%)

Query: 1   MPVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELI---THWQSPYMHAYFPALNSYP 57
           M      + +  E+ +Q             L    + +        P             
Sbjct: 59  MEGFNLELSDHPESLEQ------------ILVDCRDTLKYGVRTGHPRFFNQLSTGLDII 106

Query: 58  SLLGDMLSDAINCLGFTW 75
            L G+ L+   N   FT+
Sbjct: 107 GLAGEWLTSTANTNMFTY 124

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens} Length = 515

 Score =  251 bits (642), Expect = 3e-79
 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 10/187 (5%)

Query: 192 IFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQA 251
           + G+        F    S S +  +   R +     +Q             L  + S + 
Sbjct: 160 LVGW--SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQ-----RGLRTLPPLALFTSKEC 212

Query: 252 HSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA 308
           H S++K      +G   +R +++D++  +  + L   I   + +  +PF V  T GTT  
Sbjct: 213 HYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVL 272

Query: 309 CAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH 368
            AFD LE +  +C++ GLWLHVDAA+ GS  +    R  L G++ A+S+A+NP K L   
Sbjct: 273 GAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAG 332

Query: 369 FDCTAMW 375
             C+A+ 
Sbjct: 333 LQCSALL 339

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens} Length = 515

 Score = 63.2 bits (154), Expect = 5e-11
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 11/75 (14%)

Query: 2   PVVPKLIPNQGETSKQ-ENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLL 60
            ++   + +QGE+ KQ     R        +R+          P       +     +L 
Sbjct: 76  QLLDLELRSQGESQKQILERCRA------VIRY----SVKTGHPRFFNQLFSGLDPHALA 125

Query: 61  GDMLSDAINCLGFTW 75
           G ++++++N   +T+
Sbjct: 126 GRIITESLNTSQYTY 140

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus} Length = 497

 Score =  247 bits (633), Expect = 5e-78
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 8/189 (4%)

Query: 192 IFGFLRPPNFI-TFQTTASESTLICLLAGRTEAIRKYQQSHP-ELEHAEINSRLVAYCSD 249
            +           F +  ++S  + L+  R     K       +L   +   +L   CS 
Sbjct: 152 KYDL--SEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSK 209

Query: 250 QAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT 306
           ++H +V+K+     +G   +  ++++   ++   KL E I + K + LIPF + GT GTT
Sbjct: 210 KSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTT 269

Query: 307 GACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM 366
              A D+L+ +  +  K  +W+HVD AY G + I    +  L GVE A+SI+ +  K   
Sbjct: 270 DHGAIDDLDFIADMAVKHDMWMHVDGAYGG-ALILSSHKSRLKGVERAHSISVDFHKLFY 328

Query: 367 VHFDCTAMW 375
               C A+ 
Sbjct: 329 QTISCGALL 337

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus} Length = 497

 Score = 69.3 bits (170), Expect = 5e-13
 Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 5/79 (6%)

Query: 2   PVVPKLIPNQGETSKQENDLRNSDVGFY-YLRHFAELI----THWQSPYMHAYFPALNSY 56
                + P   E +    DL N +      +   AEL+       Q P   A+       
Sbjct: 54  APYSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCIAHLHTPPLM 113

Query: 57  PSLLGDMLSDAINCLGFTW 75
           P++  + +  A+N    +W
Sbjct: 114 PAVAAEAMIAALNQSMDSW 132

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A* Length = 514

 Score = 96.1 bits (239), Expect = 5e-22
 Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 23/173 (13%)

Query: 206 TTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVK 265
           T  S  T   LLA +    R + ++   +   E            AH++ +KA     +K
Sbjct: 164 TVTSGGTESLLLAMK--TYRDWARATKGITAPEA------VVPVSAHAAFDKAAQYFGIK 215

Query: 266 MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEG 325
           +     D         + EAI  +         V G+         D + E+  +  + G
Sbjct: 216 LVRTPLDADYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHG 269

Query: 326 LWLHVDAAYAGSSFICP-------EFRKWLAGVEYANSIAFNPSKWLMVHFDC 371
           +  HVDA   G  FI P           +   +E   S++ +  K+       
Sbjct: 270 IGCHVDACLGG--FILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGT 320

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae} Length = 497

 Score = 93.0 bits (231), Expect = 6e-21
 Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 28/182 (15%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
           T  +  +ES L+  L+ +  A+     + PE+                AH+  +KA    
Sbjct: 130 TTTSGGTESLLLACLSAKMYALHHRGITEPEI-----------IAPVTAHAGFDKAAYYF 178

Query: 263 LVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321
            +K+R++E D     +   K+ + I ++         + G+         D++E LG I 
Sbjct: 179 GMKLRHVELDPTTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIA 232

Query: 322 EKEGLWLHVDAAYAGSSFICP--------EFRKWLAGVEYANSIAFNPSKWLMVHFDCTA 373
           +K  L LHVD+      FI                  V    SI+ +  K+       + 
Sbjct: 233 QKYKLPLHVDSCLGS--FIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSV 290

Query: 374 MW 375
           + 
Sbjct: 291 IM 292

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9 Length = 456

 Score = 92.4 bits (229), Expect = 8e-21
 Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 23/174 (13%)

Query: 201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL 260
             T  +T   S  +CL A R +                            +H S  KA  
Sbjct: 153 IATPISTGM-SISLCLSAARKKYGSNV-----------------VIYPYASHKSPIKAVS 194

Query: 261 ---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL 317
              + +  +  +   D++ +  + +  AI+++ +    P  V  TL        D++ E+
Sbjct: 195 FVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPC-VLSTLTFFPPRNSDDIVEI 253

Query: 318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC 371
             ICE   +   ++ AYA  +    E  K  A     +++  +  K L+     
Sbjct: 254 AKICENYDIPHIINGAYAIQNNYYLEKLK-KAFKYRVDAVVSSSDKNLLTPIGG 306

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii} Length = 397

 Score = 86.6 bits (215), Expect = 5e-19
 Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 22/168 (13%)

Query: 209 SESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRY 268
           +E+ L+ L   +     K ++   + EH +I           AH S EK   +  ++  Y
Sbjct: 96  TEANLMALRCIKNIWREKRRKGLSKNEHPKI------IVPITAHFSFEKGREMMDLEYIY 149

Query: 269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWL 328
               +  ++    + +A+E           + G  GTT     DN+EEL  I ++  +++
Sbjct: 150 APIKEDYTIDEKFVKDAVEDYD-----VDGIIGIAGTTELGTIDNIEELSKIAKENNIYI 204

Query: 329 HVDAAYAGSSFICP--EFRKWLAGVEY-------ANSIAFNPSKWLMV 367
           HVDAA+ G   + P  + +    GV Y        +SI  +P K    
Sbjct: 205 HVDAAFGG--LVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHC 250

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana} Length = 502

 Score = 76.6 bits (188), Expect = 2e-15
 Identities = 26/171 (15%), Positives = 61/171 (35%), Gaps = 20/171 (11%)

Query: 209 SESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRY 268
           SE+ ++  LA + +   K +     ++   I                EK      V+++ 
Sbjct: 127 SEAIMLAGLAFKRKWQNKRKAEGKPVDKPNI------VTGANVQVCWEKFARYFEVELKE 180

Query: 269 IESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEG-- 325
           ++       +   + ++ ++ +         V   LG+T    F++++ L  +  ++   
Sbjct: 181 VKLSEGYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKE 234

Query: 326 ----LWLHVDAAYAGSSFICPEFR-KWLAGVEYANSIAFNPSKWLMVHFDC 371
                 +HVDAA  G          +W   +    SI  +  K+ +V+   
Sbjct: 235 TGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGI 285

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A* Length = 452

 Score = 65.7 bits (160), Expect = 6e-12
 Identities = 28/169 (16%), Positives = 60/169 (35%), Gaps = 25/169 (14%)

Query: 209 SESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRY 268
           SE+ ++  +A +    ++ + +    +   +                 K      V++R 
Sbjct: 113 SEACMLGGMAMKWRWRKRMEAAGKPTDKPNL-------VCGPVQICWHKFARYWDVELRE 165

Query: 269 IESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE--- 324
           I     +L +   ++IEA + +         V  T G T    ++  + L    +K    
Sbjct: 166 IPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQAD 219

Query: 325 ---GLWLHVDAAYAGSSFICPEFR---KWLAGVEYANSIAFNPSKWLMV 367
               + +H+DAA  G  F+ P       W   +    SI+ +  K+ + 
Sbjct: 220 TGIDIDMHIDAASGG--FLAPFVAPDIVWDFRLPRVKSISASGHKFGLA 266

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A* Length = 450

 Score = 58.5 bits (141), Expect = 1e-09
 Identities = 35/189 (18%), Positives = 61/189 (32%), Gaps = 21/189 (11%)

Query: 182 TPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241
           T SL   ++ + G     +          S  +C L                L H    +
Sbjct: 100 TNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLT---------------LRHKRPKA 144

Query: 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFF 298
           + + +       S  K+ +    +   IE+    D+L      +   I+    +H++   
Sbjct: 145 KYIIW-PRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILC-- 201

Query: 299 VCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIA 358
           +  T         D LEEL  IC    +   V+ AY   S  C    +  A V   ++  
Sbjct: 202 LHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFV 261

Query: 359 FNPSKWLMV 367
            +  K  MV
Sbjct: 262 QSLDKNFMV 270

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens} Length = 501

 Score = 56.6 bits (136), Expect = 5e-09
 Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 21/189 (11%)

Query: 182 TPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS 241
           T SL  +++ + G     N          S  +C L  R               H    +
Sbjct: 118 TNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLR---------------HKRPKA 162

Query: 242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFF 298
           + + +       S  K+ +    +   IE+    D+L      +   ++      ++   
Sbjct: 163 KYIIW-PRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCIL--C 219

Query: 299 VCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIA 358
           +  T         D LEEL  IC    +   V+ AY   S  C    +  A V   ++  
Sbjct: 220 IHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFV 279

Query: 359 FNPSKWLMV 367
            +  K  MV
Sbjct: 280 QSLDKNFMV 288

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	375
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	100.0
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	100.0
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	100.0
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	100.0
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	100.0
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	100.0
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	100.0
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	100.0
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.98
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.97
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.96
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.96
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.95
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.93
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.86
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.85
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.82
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.81
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.81
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.78
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.78
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.78
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.77
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.77
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.77
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.77
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.77
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.76
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.76
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.76
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.76
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.75
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.75
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.75
1svv_A	359	Threonine aldolase; structural genomics, structura	99.75
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.75
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.74
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.74
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.73
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.73
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.72
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.71
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.71
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.71
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.7
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.7
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.7
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.69
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.69
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.68
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.68
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.68
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.67
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.66
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.66
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.66
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.65
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.65
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.65
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.64
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.64
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.64
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.63
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.63
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.63
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.62
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.62
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.62
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.62
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.62
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.62
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.62
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.62
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.62
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.62
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.62
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.61
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.61
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.61
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.61
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.61
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.61
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.6
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.6
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.6
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.6
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.6
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.6
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.6
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.59
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.59
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.59
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.59
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.58
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.58
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.58
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.58
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.58
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.57
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.57
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.57
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.57
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.56
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.56
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.56
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.56
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.56
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.56
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.56
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.56
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.56
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.56
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.55
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.55
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.55
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.55
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.55
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.55
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.54
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.54
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.54
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.54
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.54
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.54
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.54
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.53
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.53
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.53
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.53
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.53
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.53
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.53
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.53
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.53
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.52
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.52
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.52
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.51
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.51
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.5
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.5
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.5
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.5
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.49
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.49
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.48
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.47
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.46
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.46
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.46
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.46
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.46
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.45
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.45
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.45
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.45
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.45
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.44
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.44
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.44
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.44
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.44
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.43
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.43
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.43
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.43
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.42
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.42
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.41
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.41
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.41
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.4
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.4
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.4
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.4
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.4
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.39
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.39
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.39
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.38
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.37
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.37
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.37
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.37
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.36
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.34
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.33
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.32
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.32
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.29
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.28
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.28
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.28
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	98.93
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.26
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.24
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.24
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.23
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.21
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.2
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.2
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.18
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.17
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.17
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.16
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.15
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.14
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.14
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.14
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.14
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.13
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.13
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.13
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.13
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.12
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.12
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.11
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.1
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.09
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.09
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.07
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.05
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.01
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	98.95
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	98.94
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	98.93
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	98.69
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	98.58
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	98.55
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	98.52
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	97.85
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	98.19
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	98.07
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	97.97
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	97.7

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.2e-53  Score=431.39  Aligned_cols=277  Identities=55%  Similarity=0.991  Sum_probs=249.3

Q ss_pred             CCCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhh
Q psy1596           2 PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYL   81 (375)
Q Consensus         2 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (375)
                      +.+|..+|++|+++++  +  ++++    .+.++|+.++|+||||++|++++.++|++++|++++++|++++.|..+   
T Consensus        45 ~~~~~~~p~~~~~~~~--~--~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~---  113 (481)
T 4e1o_A           45 AQLPESAPEDPDSWDS--I--FGDI----ERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASS---  113 (481)
T ss_dssp             GGSCSSCCSSCCCHHH--H--HHHH----HHHTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSTTTC---
T ss_pred             HhcCCCCCCCCCCHHH--H--HHHH----HHHHhcCCCCCCCCCeeEeCCCCCCHHHHHHHHHHHHhCcccCCcCCC---
Confidence            3578899999999999  9  9999    888999999999999999999999999999999999999999999988   


Q ss_pred             hhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhH
Q psy1596          82 RHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDK  161 (375)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~  161 (375)
                                           |++++||                                                    
T Consensus       114 ---------------------p~~~~lE----------------------------------------------------  120 (481)
T 4e1o_A          114 ---------------------PACTELE----------------------------------------------------  120 (481)
T ss_dssp             ---------------------HHHHHHH----------------------------------------------------
T ss_pred             ---------------------cHHHHHH----------------------------------------------------
Confidence                                 9999999                                                    


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                        +++++|+++++|+|         ..+++..+  ...++|+||+|||+||++|++++|++...+.+..++++.+.++.+
T Consensus       121 --~~v~~~l~~l~g~~---------~~~~~~~~--~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~  187 (481)
T 4e1o_A          121 --MNVMDWLAKMLGLP---------EHFLHHHP--SSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA  187 (481)
T ss_dssp             --HHHHHHHHHHHTCC---------GGGCTTCT--TCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred             --HHHHHHHHHHhCCC---------hhhhcccc--CCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence              99999999999998         22211000  023579999999999999999999987765544444444445567


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      +++||+|+.+|+|+.+++++++.+++.||+|++|+||+++|+++|+++.++|..|++|+++.|+|.+|.+|||++|+++|
T Consensus       188 ~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la  267 (481)
T 4e1o_A          188 RLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPIC  267 (481)
T ss_dssp             TEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred             CeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999888888899999999999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++||+|+|||||||++++++++++..+.|++++||+++|+||||++|++||++|
T Consensus       268 ~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~  321 (481)
T 4e1o_A          268 AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW  321 (481)
T ss_dssp             HHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             HHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEE
Confidence            999999999999999999999999988999999999999999999999999975

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=100.00  E-value=1.1e-52  Score=429.33  Aligned_cols=275  Identities=48%  Similarity=0.891  Sum_probs=247.8

Q ss_pred             CCCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhh
Q psy1596           2 PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYL   81 (375)
Q Consensus         2 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (375)
                      +.+|..+|++|+++++  +  ++++    .+.++|+.++|+||+|++|++++.+++++++|++++++|++++.|..+   
T Consensus        40 ~~~~~~~p~~~~~~~~--~--~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~---  108 (475)
T 3k40_A           40 PLIPDAAPEKPEKWQD--V--MQDI----ERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIAS---  108 (475)
T ss_dssp             GGSCSSCCSSCCCHHH--H--HHHH----HHHTGGGCCCTTCTTBCCSSCCCCCHHHHHHHHHHHHHCCCSSSCCCC---
T ss_pred             HhcCCCCCCCCCCHHH--H--HHHH----HHHHhccCCCCCCcCceeeCCCCCcHHHHHHHHHHHHhCccccCccCC---
Confidence            3578899999999999  9  9999    888999999999999999999999999999999999999999999988   


Q ss_pred             hhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhH
Q psy1596          82 RHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDK  161 (375)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~  161 (375)
                                           |++++||                                                    
T Consensus       109 ---------------------p~~~~lE----------------------------------------------------  115 (475)
T 3k40_A          109 ---------------------PACTELE----------------------------------------------------  115 (475)
T ss_dssp             ---------------------HHHHHHH----------------------------------------------------
T ss_pred             ---------------------cHHHHHH----------------------------------------------------
Confidence                                 9999999                                                    


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                        +++++|+++++|+|         ..++++.+   ..++|+||+|||+||++|++++|++...+.+..++++.+.++.+
T Consensus       116 --~~v~~~l~~~~g~~---------~~~~~~~~---~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~  181 (475)
T 3k40_A          116 --VVMMDWLGKMLELP---------AEFLACSG---GKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILG  181 (475)
T ss_dssp             --HHHHHHHHHHTTCC---------GGGCGGGT---SSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHH
T ss_pred             --HHHHHHHHHHhCCC---------chhccccC---CCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccC
Confidence              99999999999999         33322111   34579999999999999999999987665444444444444556


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      +++||+|+.+|+|+.+++++.|.+++.||+|++| ||+++|+++|++++++|..|++|+++.|+|.+|.+|||++|+++|
T Consensus       182 ~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la  260 (475)
T 3k40_A          182 KLVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVG  260 (475)
T ss_dssp             HEEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred             CeEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHH
Confidence            7899999999999999999989999999999999 999999999999888888899999999999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++||+|+|||||||++++++++++..+.|++++||+++|+|||+++|++||++|
T Consensus       261 ~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~  314 (475)
T 3k40_A          261 NKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW  314 (475)
T ss_dssp             HHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             HHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEE
Confidence            999999999999999988899988888899999999999999999999999875

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=100.00  E-value=4.2e-47  Score=386.91  Aligned_cols=275  Identities=51%  Similarity=0.910  Sum_probs=236.2

Q ss_pred             CCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhh
Q psy1596           3 VVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLR   82 (375)
Q Consensus         3 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (375)
                      .+|..+|++|++.++  +  ++++    .+.+.|+.++|+||+|++|++++.+++++++|++++++|++.+.|..+    
T Consensus        41 ~~~~~~p~~~~~~~~--~--~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~----  108 (486)
T 1js3_A           41 LIPATAPQEPDTFED--I--LQDV----EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAAS----  108 (486)
T ss_dssp             GSCSSCCSSCCCHHH--H--HHHH----HHTTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGC----
T ss_pred             hccccCCCCCCCHHH--H--HHHH----HHHHhcCCCCCCCCCceEeCCCCCCHHHHHHHHHHHHhCcCccccccC----
Confidence            477888999999888  8  8888    788899999999999999999999999999999999999999999888    


Q ss_pred             hhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHH
Q psy1596          83 HQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKY  162 (375)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~l  162 (375)
                                          |..+++|                                                     
T Consensus       109 --------------------~~~~~le-----------------------------------------------------  115 (486)
T 1js3_A          109 --------------------PACTELE-----------------------------------------------------  115 (486)
T ss_dssp             --------------------HHHHHHH-----------------------------------------------------
T ss_pred             --------------------hhHHHHH-----------------------------------------------------
Confidence                                9999999                                                     


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                       +++++|+++++|++.         .+....+   ...+|+||+|||+||++|++++|++...+.+..++++.+.+..++
T Consensus       116 -~~~~~~la~l~g~~~---------~~~~~~~---~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~  182 (486)
T 1js3_A          116 -TVMMDWLGKMLQLPE---------AFLAGEA---GEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEK  182 (486)
T ss_dssp             -HHHHHHHHHHTTCCG---------GGCCTTT---CSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred             -HHHHHHHHHHhCCCc---------hhcccCC---CCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCC
Confidence             999999999999982         1110000   135799999999999999999987643322111011111111124


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .+||+|+.+|+|+.+++++.|.+++.||+|++|+||+++|+++|++++++|.+|++|+++.|+|++|.+||+++|+++|+
T Consensus       183 ~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~  262 (486)
T 1js3_A          183 LVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH  262 (486)
T ss_dssp             EEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred             EEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence            57999999999999999988889999999999999999999999999888988999999999999999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +||+|+|||+|||++.+.+|+++..+.|++.+||+++|+|||+++|++||+++
T Consensus       263 ~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~  315 (486)
T 1js3_A          263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW  315 (486)
T ss_dssp             HTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             HcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEE
Confidence            99999999999999988888888888888899999999999999999999875

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=100.00  E-value=1.1e-46  Score=388.52  Aligned_cols=261  Identities=25%  Similarity=0.335  Sum_probs=233.2

Q ss_pred             CCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhh
Q psy1596           4 VPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRH   83 (375)
Q Consensus         4 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (375)
                      ++..+|++|+++++  +  ++++    .+ +++..++|+||+|++|++++.+++++++|++++++|++.+.|..+     
T Consensus        65 ~~~~~p~~~~~~~~--~--~~~~----~~-~~~~~~~~~~p~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~-----  130 (511)
T 3vp6_A           65 FNLELSDHPESLEQ--I--LVDC----RD-TLKYGVRTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIA-----  130 (511)
T ss_dssp             BCCCCCSSCCCHHH--H--HHHH----HH-HHHTSCCTTSTTEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTC-----
T ss_pred             CCCCCCCCCCCHHH--H--HHHH----HH-HhhccCCCCCCCceEeecCCCcHHHHHHHHHHHHhccCCCCcccC-----
Confidence            78899999999999  9  8888    54 445567899999999999999999999999999999999999888     


Q ss_pred             hhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHH
Q psy1596          84 QNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYS  163 (375)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le  163 (375)
                                         |+++++|                                                      
T Consensus       131 -------------------p~~~~le------------------------------------------------------  137 (511)
T 3vp6_A          131 -------------------PVFVLME------------------------------------------------------  137 (511)
T ss_dssp             -------------------HHHHHHH------------------------------------------------------
T ss_pred             -------------------chHHHHH------------------------------------------------------
Confidence                               9999999                                                      


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++|+++++|++.                   +..+|+||+|||+||++|+.++|++...+.+..+  ..   ..++.
T Consensus       138 ~~~~~~l~~~~g~~~-------------------~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G--~~---~~~~~  193 (511)
T 3vp6_A          138 QITLKKMREIVGWSS-------------------KDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG--MA---AVPKL  193 (511)
T ss_dssp             HHHHHHHHHHHTCCS-------------------SSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC--GG---GSCCE
T ss_pred             HHHHHHHHHHhCCCC-------------------CCCceEECCchHHHHHHHHHHHHHHhhhhhhhcC--cc---cCCCe
Confidence            999999999999983                   3468999999999999999999986422111111  00   02467


Q ss_pred             EEEecCCCchHHHHHHHHcCC---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLV---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      +||+|+.+|+|+.+++++.|.   +++.||+|++|+||+++|+++|+++.++|..|++|+++.|+|++|.+|||++|+++
T Consensus       194 ~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~i  273 (511)
T 3vp6_A          194 VLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADI  273 (511)
T ss_dssp             EEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHH
T ss_pred             EEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHH
Confidence            899999999999999987665   89999999999999999999999988888889999999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |++||+|+|||+|||++++++|+++..+.|+++|||+++|+|||+++|++||++|
T Consensus       274 a~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~  328 (511)
T 3vp6_A          274 CEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAIL  328 (511)
T ss_dssp             HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred             HHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEE
Confidence            9999999999999999999999999999999999999999999999999999875

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=100.00  E-value=2.1e-43  Score=361.74  Aligned_cols=261  Identities=25%  Similarity=0.335  Sum_probs=226.9

Q ss_pred             CCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhh
Q psy1596           4 VPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRH   83 (375)
Q Consensus         4 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (375)
                      +|..+|++|++.++  +  ++++    .+ +++..+++.||+|++|++++.+++++++|++++++|++.++|..+     
T Consensus        62 ~~~~~p~~~~~~~~--~--~~~~----~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~-----  127 (504)
T 2okj_A           62 FNLELSDHPESLEQ--I--LVDC----RD-TLKYGVRTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIA-----  127 (504)
T ss_dssp             BCCCCCSSCCCHHH--H--HHHH----HH-HHHTSCCTTCTTEESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTC-----
T ss_pred             cCCCCCCCCCCHHH--H--HHHH----HH-HhhccCCCCCCCEEEEccCCCCHHHHHHHHHHHhhccCCCchhhC-----
Confidence            78899999999988  8  8887    44 445566666999999999999999999999999999999999888     


Q ss_pred             hhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHH
Q psy1596          84 QNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYS  163 (375)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le  163 (375)
                                         |+++++|                                                      
T Consensus       128 -------------------~~~~~le------------------------------------------------------  134 (504)
T 2okj_A          128 -------------------PVFVLME------------------------------------------------------  134 (504)
T ss_dssp             -------------------HHHHHHH------------------------------------------------------
T ss_pred             -------------------hHHHHHH------------------------------------------------------
Confidence                               9999999                                                      


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++|+++++|++.                   +...|+||+|||+||++++.++|++..+..+..+  ..   ..++.
T Consensus       135 ~~~~~~la~~~g~~~-------------------~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G--~~---~~~~~  190 (504)
T 2okj_A          135 QITLKKMREIVGWSS-------------------KDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG--MA---AVPKL  190 (504)
T ss_dssp             HHHHHHHHHHHTCCS-------------------SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC--GG---GSCCE
T ss_pred             HHHHHHHHHHhCCCC-------------------CCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcC--cc---ccCCe
Confidence            999999999999982                   2467999999999999999999875321111000  00   01245


Q ss_pred             EEEecCCCchHHHHHHHHcCC---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLV---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      +|++|+.+|+|+.+++.+.+.   +++.||++++|+||+++|+++|+++.++|..|++|+++.|+|++|.+||+++|+++
T Consensus       191 ~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~l  270 (504)
T 2okj_A          191 VLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADI  270 (504)
T ss_dssp             EEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHH
T ss_pred             EEEECCcchHHHHHHHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHH
Confidence            899999999999999976544   89999999899999999999999888778789999999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |++||+|+|||+||+++.+.+++++..+.|++.+||+++|+|||+++|++||++|
T Consensus       271 a~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~  325 (504)
T 2okj_A          271 CEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAIL  325 (504)
T ss_dssp             HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred             HHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEE
Confidence            9999999999999999998888888888888899999999999999999999875

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=100.00  E-value=8.3e-43  Score=356.75  Aligned_cols=260  Identities=23%  Similarity=0.333  Sum_probs=226.4

Q ss_pred             CCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhhhc
Q psy1596           7 LIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNR   86 (375)
Q Consensus         7 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (375)
                      .+|++|+++++  +  ++++    .+.+++++++|+||+|++|++++..+++++++++..++|++.+.|..+        
T Consensus        72 ~~p~~~~~~~~--~--~~~~----~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~--------  135 (497)
T 2qma_A           72 DLDNKNAPLKS--V--IDDV----AELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQA--------  135 (497)
T ss_dssp             CSSSCCCCHHH--H--HHHH----HHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGC--------
T ss_pred             CCCCCCCCHHH--H--HHHH----HHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhC--------
Confidence            47999999988  8  8888    788999999999999999999999999999999999999999999888        


Q ss_pred             cccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHH
Q psy1596          87 RCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKV  166 (375)
Q Consensus        87 ~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v  166 (375)
                                      |+++++|                                                      +++
T Consensus       136 ----------------~~~~~le------------------------------------------------------~~~  145 (497)
T 2qma_A          136 ----------------SSATYVE------------------------------------------------------QKV  145 (497)
T ss_dssp             ----------------HHHHHHH------------------------------------------------------HHH
T ss_pred             ----------------hHHHHHH------------------------------------------------------HHH
Confidence                            9999999                                                      999


Q ss_pred             HHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc---Cce
Q psy1596         167 LDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN---SRL  243 (375)
Q Consensus       167 ~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~---~~~  243 (375)
                      ++|+++++|++                    ....++||+|||+||+++++++|++...+...  ++....|..   ++.
T Consensus       146 ~~~la~~~g~~--------------------~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~--~~~~~~G~~~~~g~~  203 (497)
T 2qma_A          146 VNWLCDKYDLS--------------------EKADGIFTSGGTQSNQMGLMLARDWIADKLSG--HSIQKLGLPDYADKL  203 (497)
T ss_dssp             HHHHHHHTTCC--------------------TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHC--CCHHHHCSCGGGGGE
T ss_pred             HHHHHHHhCCC--------------------CCCCeEEcCCchHHHHHHHHHHHHHHHHhhcc--cchhhcccccccCCe
Confidence            99999999997                    33579999999999999999998764421100  000000111   244


Q ss_pred             EEEecCCCchHHHHHHHHcCC---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLV---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      +|++++.+|+|+.+++.+.+.   +++.||++++++||+++|+++|+++.++|.+|++|+++.|+|++|.+||+++|+++
T Consensus       204 ~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l  283 (497)
T 2qma_A          204 RIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADM  283 (497)
T ss_dssp             EEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHH
T ss_pred             EEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHH
Confidence            899999999999999976543   79999999999999999999999887777778899999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |++||+|+|||+||+++...++ ++..+.+++.+||+++|+|||+++|++||++|
T Consensus       284 ~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~  337 (497)
T 2qma_A          284 AVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISCGALL  337 (497)
T ss_dssp             HHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEEE
T ss_pred             HHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcceEEEE
Confidence            9999999999999999987776 77777888899999999999999999999875

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=100.00  E-value=9.4e-42  Score=350.92  Aligned_cols=259  Identities=24%  Similarity=0.351  Sum_probs=225.0

Q ss_pred             CCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhh
Q psy1596           4 VPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRH   83 (375)
Q Consensus         4 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (375)
                      ++..+|++|++.++  +  ++++    .+ +++..+++.||+|++|++++..+.++++|++++++|++.++|..+     
T Consensus        78 ~~~~~p~~~~~~~~--~--~~~~----~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s-----  143 (515)
T 2jis_A           78 LDLELRSQGESQKQ--I--LERC----RA-VIRYSVKTGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIA-----  143 (515)
T ss_dssp             HCCCCCSSCCCHHH--H--HHHH----HH-HHHHSCCTTSTTEESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTC-----
T ss_pred             cccCCCCCCCCHHH--H--HHHH----HH-HhcCCCCCCCCCeEEEeeCCCCHHHHHHHHHHHHhccCCCchhhc-----
Confidence            46789999999888  8  7777    44 555666667999999999999999999999999999999999888     


Q ss_pred             hhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHH
Q psy1596          84 QNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYS  163 (375)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le  163 (375)
                                         |.++++|                                                      
T Consensus       144 -------------------~~~~~le------------------------------------------------------  150 (515)
T 2jis_A          144 -------------------PVFVLME------------------------------------------------------  150 (515)
T ss_dssp             -------------------HHHHHHH------------------------------------------------------
T ss_pred             -------------------hHHHHHH------------------------------------------------------
Confidence                               9899999                                                      


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++|+++++|++.                     ..++||+|||+||++|+.++|++..+..+..+.     ...+++
T Consensus       151 ~~~~~~la~l~g~~~---------------------~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~-----~~~~~~  204 (515)
T 2jis_A          151 EEVLRKLRALVGWSS---------------------GDGIFCPGGSISNMYAVNLARYQRYPDCKQRGL-----RTLPPL  204 (515)
T ss_dssp             HHHHHHHHHHHTCSS---------------------CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG-----GGSCCE
T ss_pred             HHHHHHHHHHhCCCC---------------------CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCc-----cccCCe
Confidence            999999999999972                     469999999999999999998753211110000     001355


Q ss_pred             EEEecCCCchHHHHHHHHcCC---eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLV---KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~---~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      +|++|+.+|+|+.+++.+.+.   +++.||++++|+||+++|+++|+++.++|..|++|+++.|+|.+|.+||+++|+++
T Consensus       205 ~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~l  284 (515)
T 2jis_A          205 ALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADV  284 (515)
T ss_dssp             EEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHH
T ss_pred             EEEECCCccHHHHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHH
Confidence            899999999999999987555   89999999899999999999999887778779999999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|+|+|||+||+++.+.+++++..+.|++.+||+++|+|||+++|++||++|
T Consensus       285 a~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~  339 (515)
T 2jis_A          285 CQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALL  339 (515)
T ss_dssp             HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred             HHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEE
Confidence            9999999999999999999888888888888899999999999999999999875

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=100.00  E-value=5.6e-35  Score=294.85  Aligned_cols=251  Identities=14%  Similarity=0.094  Sum_probs=201.8

Q ss_pred             CCCCCCCCCCCCCcccccccccccchhhhHhhh-hcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhh
Q psy1596           2 PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHF-AELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEY   80 (375)
Q Consensus         2 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (375)
                      .+++..+|++|++.++  +  ++++    .+.+ .++.++|+||+|++.   .  .+..++|+++.++|++...|..+  
T Consensus        12 ~~~~~~lp~~g~~~~~--v--~~~~----~~~~~~~~~~~~~~~~f~~~---~--~~~~v~e~~~~a~~~~~~~~~~~--   76 (452)
T 2dgk_A           12 IAESKRFPLHEMRDDV--A--FQII----NDELYLDGNARQNLATFCQT---W--DDENVHKLMDLSINKNWIDKEEY--   76 (452)
T ss_dssp             ---CCSCCCSCCCHHH--H--HHHH----HHHGGGSCCCTTBCSCCSCC---C--CCHHHHHHHHHTTTCBTTCTTTC--
T ss_pred             hccCCCCCCCCCCHHH--H--HHHH----HHHhcCCCCCccCCCCeeCC---C--chHHHHHHHHHHhccCCCChhhC--
Confidence            4567889999999988  8  8888    6666 688999999999872   1  22468999999999998888877  


Q ss_pred             hhhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchh
Q psy1596          81 LRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRD  160 (375)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~  160 (375)
                                            |...++|                                                   
T Consensus        77 ----------------------~~~~~l~---------------------------------------------------   83 (452)
T 2dgk_A           77 ----------------------PQSAAID---------------------------------------------------   83 (452)
T ss_dssp             ----------------------HHHHHHH---------------------------------------------------
T ss_pred             ----------------------hhHHHHH---------------------------------------------------
Confidence                                  8888888                                                   


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCC--CCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRP--PNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~--~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                         +++++|+++++|++.+                  .  ...+++|+|||+||++++++++++...+.+..+..     
T Consensus        84 ---~~~~~~la~l~g~~~~------------------~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~-----  137 (452)
T 2dgk_A           84 ---LRCVNMVADLWHAPAP------------------KNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKP-----  137 (452)
T ss_dssp             ---HHHHHHHHHHTTCCCC------------------TTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCC-----
T ss_pred             ---HHHHHHHHHHhCCCcc------------------cccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCC-----
Confidence               9999999999999831                  1  23699999999999999999887543221111000     


Q ss_pred             hcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                       ..++.|++++ +|+++.+++++.|.+++.||+++ +++||+++|+++|+++      +.+|+++.|+|++|.++|+++|
T Consensus       138 -~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I  209 (452)
T 2dgk_A          138 -TDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPL  209 (452)
T ss_dssp             -CSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHH
T ss_pred             -CCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHH
Confidence             0134788899 99999999998889999999986 7999999999999653      5689999999999999999999


Q ss_pred             HHHHHhc------CCEEEEecccccCcc--cchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKE------GLWLHVDAAYAGSSF--ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~------~iwlHVDaA~gg~~~--~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++      |+|+|||+||+++..  +.+..+..+ .++.+||+++|+|||+++|++||+++
T Consensus       210 ~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~  274 (452)
T 2dgk_A          210 HDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHKFGLAPLGCGWVI  274 (452)
T ss_dssp             HHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEE
T ss_pred             HHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc-CCCCCcEEEECcccccCCCCCeEEEE
Confidence            9999996      999999999999764  233322222 25679999999999999999999874

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.98  E-value=1.6e-31  Score=274.60  Aligned_cols=254  Identities=13%  Similarity=0.136  Sum_probs=200.7

Q ss_pred             CCCCC-CCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCce-eecCCCCChHHHHHHHHHHhhccccccchhhh
Q psy1596           2 PVVPK-LIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMH-AYFPALNSYPSLLGDMLSDAINCLGFTWVRTE   79 (375)
Q Consensus         2 ~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (375)
                      +.+|. .+|++|++.++  +  ++++    .+.+.    ...||+++ +.|. ...++..+.+++..++|++...|..+ 
T Consensus        25 ~~lp~~~~p~~~~~~~~--~--~~~~----~~~i~----l~gnp~~~l~s~~-t~~~~~~v~~~l~~~~~~~~~~~~~~-   90 (502)
T 3hbx_A           25 TSLPRFKMPENSIPKEA--A--YQII----NDELM----LDGNPRLNLASFV-TTWMEPECDKLIMSSINKNYVDMDEY-   90 (502)
T ss_dssp             SCCCSSSCCSSCCCHHH--H--HHHH----HHHGG----GSCCGGGBTTCCS-CCCCCHHHHHHHHHTTTCBTTCTTTC-
T ss_pred             hhccCCCCCCCCCCHHH--H--HHHH----HHHhc----cCCCCCceecccc-CCCCCHHHHHHHHHHhccCCCChhcC-
Confidence            45777 89999999888  7  6666    44432    34688853 3222 22344568999999999999889777 


Q ss_pred             hhhhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcch
Q psy1596          80 YLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDR  159 (375)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~  159 (375)
                                             |.++++|                                                  
T Consensus        91 -----------------------p~~~~le--------------------------------------------------   97 (502)
T 3hbx_A           91 -----------------------PVTTELQ--------------------------------------------------   97 (502)
T ss_dssp             -----------------------HHHHHHH--------------------------------------------------
T ss_pred             -----------------------hhHHHHH--------------------------------------------------
Confidence                                   8888888                                                  


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                          +++++|+++++|++.+.      +          ....|++|+|||+||++++++++.++..+.+..+.+      
T Consensus        98 ----~~~~~~la~l~g~~~~~------~----------~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~------  151 (502)
T 3hbx_A           98 ----NRCVNMIAHLFNAPLEE------A----------ETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP------  151 (502)
T ss_dssp             ----HHHHHHHHHHTTCCCCS------S----------CCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCC------
T ss_pred             ----HHHHHHHHHHhCCCccc------c----------cCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCC------
Confidence                99999999999998210      0          235689999999999999999887654433221111      


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ..++.|++++.+|+|+.+++++.|.+++.||++++ |+||+++|+++|+++      |.+|+++.|+|++|.++|+++|+
T Consensus       152 ~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~  225 (502)
T 3hbx_A          152 VDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLN  225 (502)
T ss_dssp             CSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHH
T ss_pred             CCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHH
Confidence            12348999999999999999998999999999765 999999999999764      56899999999999999999999


Q ss_pred             HHHHhc------CCEEEEecccccCcc--cchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKE------GLWLHVDAAYAGSSF--ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~------~iwlHVDaA~gg~~~--~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++      |+|+|||+||++++.  +++.++..+ .++.+|++++++|||+++|.+||+++
T Consensus       226 ~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~-~~~~~D~v~~s~hK~l~~p~g~G~~~  289 (502)
T 3hbx_A          226 DLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVI  289 (502)
T ss_dssp             HHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEE
T ss_pred             HHHHHhhhccCCCCeEEEECCccchhhhhhCccccccc-CCCCceEEEECcccccCCCCCeEEEE
Confidence            999999      999999999998753  344444333 25689999999999999999999764

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.97  E-value=3e-32  Score=276.55  Aligned_cols=235  Identities=15%  Similarity=0.063  Sum_probs=179.0

Q ss_pred             CCCCCCCCCcccccccccccchhhhHhhhhcccccCC-----------------CCCceeecCCCCChHHHHHHHHHHhh
Q psy1596           6 KLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQ-----------------SPYMHAYFPALNSYPSLLGDMLSDAI   68 (375)
Q Consensus         6 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~p~~~~~~~~~~~~~~~~~~~~~~~~   68 (375)
                      ..+|++|-+-++  +  ...+    .+.-.-..++|.                 .||||||+++.    +++||++++  
T Consensus        21 ~~~p~~g~~~~~--i--~~~l----~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~--   86 (450)
T 3bc8_A           21 GKCPEDGWDEST--L--ELFL----HELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV--   86 (450)
T ss_dssp             CCCCSSCCCHHH--H--HHHH----HHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC---------
T ss_pred             ccCCccCCCHHH--H--HHHH----HHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh--
Confidence            368999977666  5  3333    222222344552                 37999999987    778899988  


Q ss_pred             ccccccchhhhhhhhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccc
Q psy1596          69 NCLGFTWVRTEYLRHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEA  148 (375)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  148 (375)
                        +. .|..+                        |+...+|                                       
T Consensus        87 --~~-~~~~~------------------------~~~~~~e---------------------------------------  100 (450)
T 3bc8_A           87 --QP-KAAGS------------------------SLLNKIT---------------------------------------  100 (450)
T ss_dssp             --CC-SBHHH------------------------HHHHHHH---------------------------------------
T ss_pred             --Cc-cccCC------------------------cHHHHHH---------------------------------------
Confidence              33 88888                        9888899                                       


Q ss_pred             cCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChH-HHHHHHHHHHHHHHHHHh
Q psy1596         149 DKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTAS-ESTLICLLAGRTEAIRKY  227 (375)
Q Consensus       149 ~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT-~Anl~AL~aar~~~~~~~  227 (375)
                                     +.++.|+.+++|+|                    ...++++++|+| +++.++|.++|....   
T Consensus       101 ---------------~~~~~~~~~~lGlp--------------------~~~~~~lV~GaT~~~~a~~L~aar~~~~---  142 (450)
T 3bc8_A          101 ---------------NSLVLNVIKLAGVH--------------------SVASCFVVPMATGMSLTLCFLTLRHKRP---  142 (450)
T ss_dssp             ---------------HHHHHHHHHHHTCT--------------------TCCEEEEESSCHHHHHHHHHHHHHHHCT---
T ss_pred             ---------------HHHHHHHHHhCCCC--------------------CCceEEEECCHHHHHHHHHHHHcchhhc---
Confidence                           99999999999999                    456789999998 778888888887310   


Q ss_pred             hccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         228 QQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       228 ~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                                   +...|+++..+|.|+.||+.+.|..++.|+.   ++.++||+++|+++|+++...  .+++|+.|.+
T Consensus       143 -------------~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~--~~~~Vv~t~t  207 (450)
T 3bc8_A          143 -------------KAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPE--HILCLHSTTA  207 (450)
T ss_dssp             -------------TCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGG--GEEEEEEESS
T ss_pred             -------------CCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCC--CEEEEEEECC
Confidence                         1235677788999999999998887777754   678999999999999987522  3678888888


Q ss_pred             CCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC--CcccEEEEcCcccCCCCCcceeeC
Q psy1596         305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV--EYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi--e~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++.+|.+|||++|+++|++||+|+|||+|||+...+.++.-  ..++  ++||+++.|+|||+++|++|++++
T Consensus       208 ~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~--~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~  278 (450)
T 3bc8_A          208 CFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLI--QQGARVGRIDAFVQSLDKNFMVPVGGAIIA  278 (450)
T ss_dssp             CCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHH--HHHHHHSCCCEEEEEHHHHHSCCSSCEEEE
T ss_pred             cCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHH--HHHhcccCCCEEEECCccCCCchhccEEEE
Confidence            77788999999999999999999999999999765433211  1233  679999999999999999999874

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.96  E-value=5.2e-29  Score=255.32  Aligned_cols=247  Identities=16%  Similarity=0.115  Sum_probs=202.2

Q ss_pred             CCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecC-CCCChHHHHHHHHHHhhccccccchhhhhhhhh
Q psy1596           6 KLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFP-ALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQ   84 (375)
Q Consensus         6 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (375)
                      ..+|++|++.++  +  ++++    .+.+.+..++|.+|+|++++. +....+..+.+.+....+.+.+.|...      
T Consensus        69 ~~lp~~g~~~~~--i--~~~l----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  134 (514)
T 3mad_A           69 ARLPRAGLPRAE--I--LAEI----AAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLW------  134 (514)
T ss_dssp             SSCCSSCCCHHH--H--HHHH----HHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTC------
T ss_pred             CCCCCCCCCHHH--H--HHHH----HHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccC------
Confidence            567888888777  7  7777    666678889999999999975 446677889999999999888887666      


Q ss_pred             hccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHH
Q psy1596          85 NRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSS  164 (375)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~  164 (375)
                                        |...++|                                                      .
T Consensus       135 ------------------p~~~~le------------------------------------------------------~  142 (514)
T 3mad_A          135 ------------------PSTAKFE------------------------------------------------------A  142 (514)
T ss_dssp             ------------------HHHHHHH------------------------------------------------------H
T ss_pred             ------------------hHHHHHH------------------------------------------------------H
Confidence                              7777777                                                      8


Q ss_pred             HHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceE
Q psy1596         165 KVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV  244 (375)
Q Consensus       165 ~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~v  244 (375)
                      ++.+|+++++|++.+.                 +...|++|+|||+||..++.+++.....+.+           .+++.
T Consensus       143 ~l~~~la~~~g~~~~~-----------------~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g-----------~~~d~  194 (514)
T 3mad_A          143 EVVAMTAHMLGGDAAG-----------------GTVCGTVTSGGTESLLLAMKTYRDWARATKG-----------ITAPE  194 (514)
T ss_dssp             HHHHHHHHHTTGGGGT-----------------SCCEEEEESSHHHHHHHHHHHHHHHHHHHHC-----------CSSCE
T ss_pred             HHHHHHHHHcCCCCcc-----------------CCcceEEcCcHHHHHHHHHHHHHHHhhhhcC-----------CCCCe
Confidence            9999999999987200                 2345799999999999999999875422110           13468


Q ss_pred             EEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhc
Q psy1596         245 AYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKE  324 (375)
Q Consensus       245 V~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~  324 (375)
                      |+++..+|.++.++++..|.+++.||++++|++|+++|+++|+++      +.+|+++.+++++|.++|+++|+++|++|
T Consensus       195 Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~  268 (514)
T 3mad_A          195 AVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEH  268 (514)
T ss_dssp             EEEETTSCTHHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHH
T ss_pred             EEEeCccchHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHh
Confidence            999999999999999888889999999999999999999999653      56899999999999999999999999999


Q ss_pred             CCEEEEecccccCccc--------chhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         325 GLWLHVDAAYAGSSFI--------CPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       325 ~iwlHVDaA~gg~~~~--------~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+|||+|+||+++...        .+.++...   ..+|++++++|||++.|+++|+++
T Consensus       269 ~i~livDea~~~~~~~~~~~~g~~~~~~~~~~---~g~d~~~~s~~K~l~~~~~~g~~~  324 (514)
T 3mad_A          269 GIGCHVDACLGGFILPWAERLGYPVPPFDFRL---EGVTSVSADTHKYGYGAKGTSVIL  324 (514)
T ss_dssp             TCEEEEECTTTTTTHHHHHHTTCCCCCCSTTS---TTCCEEEECTTTTTCCCSSCEEEE
T ss_pred             CCeEEEecccccccchhHHhcCCCCCcccccC---CCCcEEEECchhccCCCCCeEEEE
Confidence            9999999999987642        11222222   346999999999999999999873

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.9e-29  Score=256.90  Aligned_cols=247  Identities=17%  Similarity=0.133  Sum_probs=193.4

Q ss_pred             CCCCCCCCCCCcccccccccccchhhhHhhhh-cccccCCCCCceeecCCCC-ChHHHHHHHHHHhhccccccchhhhhh
Q psy1596           4 VPKLIPNQGETSKQENDLRNSDVGFYYLRHFA-ELITHWQSPYMHAYFPALN-SYPSLLGDMLSDAINCLGFTWVRTEYL   81 (375)
Q Consensus         4 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (375)
                      ....+|++|.+.++  +  ++++    .+... |..++|.||+|++++..+. ....++.+.+....+.+.+.|..+   
T Consensus        34 ~~~~lp~~g~~~~~--i--~~~l----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  102 (497)
T 3mc6_A           34 NFPQLPSNGIPQDD--V--IEEL----NKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVF---  102 (497)
T ss_dssp             CCSSCCSSCCCHHH--H--HHHH----HHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTC---
T ss_pred             cccCCCCCCCCHHH--H--HHHH----HHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccC---
Confidence            45678999988877  7  6666    44433 3678999999999965443 334444455544444466666655   


Q ss_pred             hhhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhH
Q psy1596          82 RHQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDK  161 (375)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~  161 (375)
                                           |...++|                                                    
T Consensus       103 ---------------------~~~~~l~----------------------------------------------------  109 (497)
T 3mc6_A          103 ---------------------PAVRKME----------------------------------------------------  109 (497)
T ss_dssp             ---------------------HHHHHHH----------------------------------------------------
T ss_pred             ---------------------hHHHHHH----------------------------------------------------
Confidence                                 7667777                                                    


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                        +++.+|+++++|++.                   +...+++|+|||+||.+++.++|++...+.     +      .+
T Consensus       110 --~~~~~~la~~~g~~~-------------------~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~-----g------~~  157 (497)
T 3mc6_A          110 --SEVVSMVLRMFNAPS-------------------DTGCGTTTSGGTESLLLACLSAKMYALHHR-----G------IT  157 (497)
T ss_dssp             --HHHHHHHHHHTTCCT-------------------TTCCEEEESSHHHHHHHHHHHHHHHHHHHS-----C------CS
T ss_pred             --HHHHHHHHHHhCCCC-------------------CCCeEEEcCcHHHHHHHHHHHHHHHHHhcC-----C------CC
Confidence              999999999999982                   345799999999999999999987543211     0      12


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      ++.|+++..+|.++.+++.+.|.+++.||+++ ++++|+++|+++|+++      +.+|+++.+++++|.++|+++|+++
T Consensus       158 ~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~l  231 (497)
T 3mc6_A          158 EPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKI  231 (497)
T ss_dssp             SCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTH
T ss_pred             CceEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHH
Confidence            35899999999999999998899999999987 8999999999998643      6699999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCccc---------chhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFI---------CPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~---------~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |++||+|+|||+||+++...         .|.++...   ..+|++++++|||+++|.++|+++
T Consensus       232 a~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~---~g~d~~~~s~~K~l~~~~~~g~~~  292 (497)
T 3mc6_A          232 AQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRV---PGVTSISCDTHKYGFAPKGSSVIM  292 (497)
T ss_dssp             HHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTS---TTCCEEEEETTTTTCCCSSCEEEE
T ss_pred             HHHhCCEEEEECcchhhhhhhhhhhcccCCccccccC---CCCcEEEECchhhcCCCCCceeEE
Confidence            99999999999999976432         11222222   346999999999999999999863

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.95  E-value=9.9e-28  Score=242.92  Aligned_cols=170  Identities=19%  Similarity=0.187  Sum_probs=139.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChH-HHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTAS-ESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT-~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +++++|+++++|.+                    ..  ++||+||| ++|+.++.+++...                 ++
T Consensus       136 ~~~~~~la~~~g~~--------------------~~--~~~t~g~te~a~~~al~~~~~~~-----------------~~  176 (456)
T 2z67_A          136 NKILESFFKQLGLN--------------------VH--AIATPISTGMSISLCLSAARKKY-----------------GS  176 (456)
T ss_dssp             HHHHHHHHHHTTCC--------------------CE--EEEESSCHHHHHHHHHHHHHHHH-----------------CC
T ss_pred             HHHHHHHHHHcCCC--------------------CC--EEEeCcHHHHHHHHHHHHHHHhc-----------------CC
Confidence            99999999999998                    32  89999999 57777888765421                 12


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      ..|+++..+|.|+.++++..|.+++.|+.   +++|++|+++|+++|+++..++ .+++|+.+.++|++|.++|+++|++
T Consensus       177 ~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~  255 (456)
T 2z67_A          177 NVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAK  255 (456)
T ss_dssp             CEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHH
Confidence            35777778999999999888888888876   7789999999999994332122 3678889999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcc-cchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSF-ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~-~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|+++|+|+|||+||++.+. ..|.....+.+  .+|++++|+|||+++|.++|+++
T Consensus       256 la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~~~p~g~G~l~  310 (456)
T 2z67_A          256 ICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNLLTPIGGGLVY  310 (456)
T ss_dssp             HHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHHCCCSSCEEEE
T ss_pred             HHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCcCCCCCeEEEE
Confidence            99999999999999998765 44443333443  58999999999999999999875

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.93  E-value=9.4e-25  Score=212.11  Aligned_cols=246  Identities=15%  Similarity=0.122  Sum_probs=183.3

Q ss_pred             CCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhhhc
Q psy1596           7 LIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQNR   86 (375)
Q Consensus         7 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (375)
                      .+|+.|.+.++  +  ++++     +.+.+...+|.+|+|+++.+....+ . +.+.+..++..+...+...        
T Consensus         4 ~lp~~~~~~~~--~--~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~-~-v~~a~~~~~~~~~~~~~~~--------   64 (397)
T 3f9t_A            4 NMQEKGVSEKE--I--LEEL-----KKYRSLDLKYEDGNIFGSMCSNVLP-I-TRKIVDIFLETNLGDPGLF--------   64 (397)
T ss_dssp             SCCSSCCCHHH--H--HHHH-----HHHHTTSCCGGGTCBCSCSCCCCCT-H-HHHHHHHHTTCCTTSGGGB--------
T ss_pred             cCCCCCCCHHH--H--HHHH-----HHhhccCCCCCCCCeEEEecCCCcH-H-HHHHHHHHHhhcCCCcccC--------
Confidence            57888888877  7  6665     4566788899999999998776544 3 3455655555432222111        


Q ss_pred             cccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHH
Q psy1596          87 RCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKV  166 (375)
Q Consensus        87 ~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v  166 (375)
                                      |...+++                                                      .++
T Consensus        65 ----------------~~~~~~~------------------------------------------------------~~l   74 (397)
T 3f9t_A           65 ----------------KGTKLLE------------------------------------------------------EKA   74 (397)
T ss_dssp             ----------------HHHHHHH------------------------------------------------------HHH
T ss_pred             ----------------hhHHHHH------------------------------------------------------HHH
Confidence                            2233333                                                      899


Q ss_pred             HHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE
Q psy1596         167 LDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY  246 (375)
Q Consensus       167 ~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~  246 (375)
                      .+|+++++|.+.                     ..+++|+|||+|+..++.+++.....+.....      +..++..|+
T Consensus        75 ~~~la~~~~~~~---------------------~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~------~~~~gd~vl  127 (397)
T 3f9t_A           75 VALLGSLLNNKD---------------------AYGHIVSGGTEANLMALRCIKNIWREKRRKGL------SKNEHPKII  127 (397)
T ss_dssp             HHHHHHHTTCTT---------------------CEEEEESCHHHHHHHHHHHHHHHHHHHHHTTC------CCCSSCEEE
T ss_pred             HHHHHHHhCCCC---------------------CCEEEecCcHHHHHHHHHHHHHHHHhhhhhcc------cCCCCeEEE
Confidence            999999999872                     36899999999999999998765322111000      012356899


Q ss_pred             ecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCC
Q psy1596         247 CSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGL  326 (375)
Q Consensus       247 ~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~i  326 (375)
                      +++.+|.++.+++...|.+++.||.++++.+|+++|+++|++.     .+.+|+++.+++++|.++|+++|.++|++||+
T Consensus       128 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~  202 (397)
T 3f9t_A          128 VPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNI  202 (397)
T ss_dssp             EETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTC
T ss_pred             ECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCC
Confidence            9999999999999888889999999999999999999999872     14478888899999999999999999999999


Q ss_pred             EEEEecccccCcccchhhhh-------hh-cCCCcccEEEEcCcccCCCCCcceee
Q psy1596         327 WLHVDAAYAGSSFICPEFRK-------WL-AGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       327 wlHVDaA~gg~~~~~~~~~~-------~~-~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+|+|+||+++.+.......       .+ ... .+|++++++||+++.|.++|++
T Consensus       203 ~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~  257 (397)
T 3f9t_A          203 YIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGI  257 (397)
T ss_dssp             EEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEE
T ss_pred             eEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEE
Confidence            99999999986542110000       00 011 4699999999999999999876

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.86  E-value=3e-21  Score=195.27  Aligned_cols=172  Identities=17%  Similarity=0.064  Sum_probs=131.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+||+++ |+|                    .....+++.|+|.+++.+++++..+..               ....
T Consensus       120 ~l~ld~L~~~-G~~--------------------~~~~~flVnGsTgg~lamilaa~r~~r---------------pg~d  163 (501)
T 3hl2_A          120 SLVLDIIKLA-GVH--------------------TVANCFVVPMATGMSLTLCFLTLRHKR---------------PKAK  163 (501)
T ss_dssp             HHHHHHHHHT-TCT--------------------TCCEEEEESSCHHHHHHHHHHHHHHHC---------------TTCC
T ss_pred             HHHHHHHHHc-CCC--------------------CCCcEEEECcHHHHHHHHHHHHcCccc---------------CCCC
Confidence            6789999998 999                    456788999999777766666544210               0124


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC-ccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG-ACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~-tGavDpl~eI~~  319 (375)
                      .|+++..+|.|+.+|+.+.|.+++.|+.   ++...+|+++||++|++...   ..+++|++..++. .+.+|||++|++
T Consensus       164 ~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga---~~i~~V~~Ttt~y~p~~~ddI~eIae  240 (501)
T 3hl2_A          164 YIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGP---DCILCIHSTTSCFAPRVPDRLEELAV  240 (501)
T ss_dssp             EEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCG---GGEEEEEEECSCCTTBCCCCHHHHHH
T ss_pred             EEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCC---CcEEEEEecCCCCCCcccccHHHHHH
Confidence            6888999999999999999999998876   45689999999999998621   2334444433333 457799999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +|++||+|+|||+|||+...+.++.-...-.+.+||.++.|+||++++|++++++
T Consensus       241 Ich~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii  295 (501)
T 3hl2_A          241 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAII  295 (501)
T ss_dssp             HHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEE
T ss_pred             HHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEE
Confidence            9999999999999999987555432211111235899999999999999998875

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.85  E-value=1.9e-20  Score=190.38  Aligned_cols=175  Identities=14%  Similarity=0.079  Sum_probs=138.4

Q ss_pred             hcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         156 ILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       156 ~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      ..|..+++.++.+|+++++|++                    .  ..++|+|||+|+..|++++|.....+ +.      
T Consensus       102 ~~g~~~l~~~l~~~la~~~g~~--------------------~--~~~~~~ggt~a~~~al~~~~~~~~~~-Gd------  152 (474)
T 1wyu_B          102 AQGALRLMWELGEYLKALTGMD--------------------A--ITLEPAAGAHGELTGILIIRAYHEDR-GE------  152 (474)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTCS--------------------E--EECCCSSHHHHHHHHHHHHHHHHHHT-TC------
T ss_pred             ChHHHHHHHHHHHHHHHHHCCC--------------------c--eeecChHHHHHHHHHHHHHHHHHHhc-CC------
Confidence            4677788899999999999987                    1  35688999999999999887643211 00      


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-ccH
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DNL  314 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dpl  314 (375)
                         ..++..|++++.+|.++.+++...|.+++.||++++|++|+++|+++|+++      +.+|+++.++ .+|.+ +++
T Consensus       153 ---~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~~------t~~v~~~~pn-~~G~~~~~l  222 (474)
T 1wyu_B          153 ---GRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELGPH------VAALMLTNPN-TLGLFERRI  222 (474)
T ss_dssp             ---TTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTT------EEEEEECSSC-TTSCCCTTH
T ss_pred             ---ccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCCC------ceEEEEECCC-CCcccCCCH
Confidence               012347889999999999999888899999999989999999999999654      3467777775 59999 899


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC-----cceee
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF-----DCTAM  374 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~-----~~g~l  374 (375)
                      ++|+++|+++|+|+|+|+||+.+..  ...+....   .+|++++|+||+++.|+     ++|++
T Consensus       223 ~~i~~l~~~~g~~li~Dea~~~~~~--g~~~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~  282 (474)
T 1wyu_B          223 LEISRLCKEAGVQLYYDGANLNAIM--GWARPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPV  282 (474)
T ss_dssp             HHHHHHHHHHTCEEEEEGGGGGGTT--TTCCHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCE
T ss_pred             HHHHHHHHHcCCEEEEeCchhhhhc--cCCCcccC---CCcEEEEeCccccccCCCCCCCCeEEE
Confidence            9999999999999999999976542  11111111   36999999999999997     47765

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.82  E-value=1.1e-19  Score=178.15  Aligned_cols=162  Identities=14%  Similarity=0.035  Sum_probs=133.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                    .....++|+|||+++..++.+...                   ++.
T Consensus        49 ~~~~~~la~~~~~~--------------------~~~~v~~~~sgt~al~~~~~~~~~-------------------~gd   89 (411)
T 3nnk_A           49 NEVMALYRGVFRTE--------------------NRWTMLVDGTSRAGIEAILVSAIR-------------------PGD   89 (411)
T ss_dssp             HHHHHHHHHHHTCC--------------------CSEEEEEESCHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC--------------------CCcEEEECCCcHHHHHHHHHHhcC-------------------CCC
Confidence            78899999999987                    223478899999999988876522                   345


Q ss_pred             EEEecCCCchH--HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         244 VAYCSDQAHSS--VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       244 vV~~S~~aH~S--v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      .|++++.+|++  +..++...+.+++.||.++++.+|+++|+++|++.     .+.+|+++.++|++|.+.|+++|+++|
T Consensus        90 ~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~  164 (411)
T 3nnk_A           90 KVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRI-----RPRLLLTVQGDTSTTMLQPLAELGEIC  164 (411)
T ss_dssp             EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHH
T ss_pred             EEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhC-----CCeEEEEeCCCCCcceeccHHHHHHHH
Confidence            78899999988  77777788889999999989999999999999863     145888899999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++||+|+|+|+|++.+..... ..    . ..+|.+++++|||++.|.++|+++
T Consensus       165 ~~~~~~li~Dea~~~~~~~~~-~~----~-~~~d~~~~s~~K~l~~~~g~g~~~  212 (411)
T 3nnk_A          165 RRYDALFYTDATASLGGNPLE-TD----V-WGLDAVSAGMQKCLGGPSGTSPIT  212 (411)
T ss_dssp             HHHTCEEEEECTTTBTTBCCC-TT----T-TTCSEEECCSTTTTCCCSSEEEEE
T ss_pred             HHcCCEEEEECCcccCCcccc-hh----c-cCCcEEEecCccccCCCCceEEEE
Confidence            999999999999987654221 11    1 136999999999999999998864

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.81  E-value=3.5e-19  Score=174.95  Aligned_cols=164  Identities=13%  Similarity=0.055  Sum_probs=133.0

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      +..++.+++++++|.+                    .....++|+|||+++..++.+...                   +
T Consensus        45 ~~~~l~~~la~~~g~~--------------------~~~~~~~~~s~t~al~~~~~~l~~-------------------~   85 (416)
T 3isl_A           45 IMNETMEMLRELFQTK--------------------NRWAYPIDGTSRAGIEAVLASVIE-------------------P   85 (416)
T ss_dssp             HHHHHHHHHHHHTTCC--------------------CSEEEEEESCHHHHHHHHHHHHCC-------------------T
T ss_pred             HHHHHHHHHHHHhCCC--------------------CCcEEEecCcHHHHHHHHHHHhcC-------------------C
Confidence            3488999999999987                    222234889999999888775421                   3


Q ss_pred             ceEEEecCCCchH--HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         242 RLVAYCSDQAHSS--VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       242 ~~vV~~S~~aH~S--v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      +..|++++.+|++  +.+++...|.+++.||.++++.+|+++|+++|++..     +.+|+++.++|++|.+.|+++|++
T Consensus        86 gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~  160 (416)
T 3isl_A           86 EDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVK-----PKIVAMVHGETSTGRIHPLKAIGE  160 (416)
T ss_dssp             TCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCHHHHH
T ss_pred             CCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCC-----CcEEEEEccCCCCceecCHHHHHH
Confidence            4578899999998  667777888899999999999999999999998531     458889999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|++||+++|+|++|+.+....+ .    .. ..+|.+++++|||++.|.++|+++
T Consensus       161 l~~~~~~~li~D~a~~~~~~~~~-~----~~-~~~d~~~~s~~K~l~g~~g~g~~~  210 (416)
T 3isl_A          161 ACRTEDALFIVDAVATIGGCEVK-V----DE-WKIDAAIGGTQKCLSVPSGMAPIT  210 (416)
T ss_dssp             HHHHTTCEEEEECTTTTTTSCCC-T----TT-TTCSEEECCSSSTTCCCSSEEEEE
T ss_pred             HHHHcCCEEEEECCccccCCCcc-h----hh-cCCCEEEecCccccCCCCCeEEEE
Confidence            99999999999999987654221 1    11 136999999999999999999864

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.81  E-value=4.1e-19  Score=172.47  Aligned_cols=167  Identities=11%  Similarity=-0.015  Sum_probs=136.7

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ..+++++.+++++++|.+                    +....++|+|||+|+..++.+...                  
T Consensus        52 ~~~~~~~~~~la~~~g~~--------------------~~~~v~~~~g~t~a~~~~~~~l~~------------------   93 (386)
T 2dr1_A           52 RKVHMDTVERLREFLEVE--------------------KGEVLLVPSSGTGIMEASIRNGVS------------------   93 (386)
T ss_dssp             HHHHHHHHHHHHHHHTCS--------------------SSEEEEESSCHHHHHHHHHHHHSC------------------
T ss_pred             HHHHHHHHHHHHHHhCCC--------------------CCcEEEEeCChHHHHHHHHHHhhc------------------
Confidence            456689999999999986                    223578999999999998876522                  


Q ss_pred             cCceEEEecCCCchH--HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         240 NSRLVAYCSDQAHSS--VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       240 ~~~~vV~~S~~aH~S--v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                       ++..|++++.+|.+  +..++...|.+++.+|.+.++.+|+++|+++|++..    .+.+|+++.++|++|.+.|+++|
T Consensus        94 -~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i  168 (386)
T 2dr1_A           94 -KGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNP----DVEAVTITYNETSTGVLNPLPEL  168 (386)
T ss_dssp             -TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHH
T ss_pred             -CCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCC----CCcEEEEEeecCCcchhCCHHHH
Confidence             24578899999998  777777788899999998889999999999997521    25578888899999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|+++|+|+||+.+....+     +... .+|.++.++||+++.|.++|+++
T Consensus       169 ~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s~sK~~~~~~g~G~~~  220 (386)
T 2dr1_A          169 AKVAKEHDKLVFVDAVSAMGGADIK-----FDKW-GLDVVFSSSQKAFGVPPGLAIGA  220 (386)
T ss_dssp             HHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEEEETTSTTCCCSSCEEEE
T ss_pred             HHHHHHcCCeEEEEccccccCcccc-----cccc-CCcEEEEeccccccCCCceEEEE
Confidence            9999999999999999997754211     1111 46999999999999998888763

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.78  E-value=1.5e-18  Score=168.56  Aligned_cols=162  Identities=9%  Similarity=0.020  Sum_probs=130.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                    .....++|+|||+++..++.+...                   ++.
T Consensus        59 ~~l~~~la~~~~~~--------------------~~~~v~~~~gg~~al~~~~~~~~~-------------------~gd   99 (393)
T 3kgw_A           59 EEIKQGIQYVFQTR--------------------NPLTLVVSGSGHCAMETALFNLLE-------------------PGD   99 (393)
T ss_dssp             HHHHHHHHHHHTCC--------------------CSEEEEESCCTTTHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC--------------------CCcEEEEeCCcHHHHHHHHHhcCC-------------------CCC
Confidence            78899999999987                    333578999999999888876522                   345


Q ss_pred             EEEecCCCchHH--HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         244 VAYCSDQAHSSV--EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       244 vV~~S~~aH~Sv--~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      .|+++..+|++.  ...+...|.+++.+|.++++.+|+++|+++|++..     +.+|+++.++|++|.+.|+++|.++|
T Consensus       100 ~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~  174 (393)
T 3kgw_A          100 SFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHK-----PVLLFLVHGESSTGVVQPLDGFGELC  174 (393)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHH
T ss_pred             EEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCC-----CcEEEEeccCCcchhhccHHHHHHHH
Confidence            677888888643  55667778899999999889999999999998731     44788888999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++||+|+++|++|+.+.....     ... ..+|.+++++||+++.|.|+|+++
T Consensus       175 ~~~~~~li~De~~~~g~~~~~-----~~~-~~~d~~~~s~sK~~~~~~g~g~~~  222 (393)
T 3kgw_A          175 HRYQCLLLVDSVASLGGVPIY-----MDQ-QGIDIMYSSSQKVLNAPPGISLIS  222 (393)
T ss_dssp             HHTTCEEEEECTTTTTTSCCC-----TTT-TTCCEEEEESSSTTCCCSSCEEEE
T ss_pred             HHcCCEEEEECCccccCcccc-----hhh-cCCCEEEecCcccccCCCceeEEE
Confidence            999999999999985533221     011 136999999999999999988763

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.78  E-value=1.4e-18  Score=166.16  Aligned_cols=165  Identities=10%  Similarity=0.013  Sum_probs=131.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .....++++++++++|.+.                   +....++|+|||+|+..++.+.+.                  
T Consensus        32 ~~~~~~l~~~la~~~g~~~-------------------~~~~v~~t~g~t~a~~~~~~~~~~------------------   74 (353)
T 2yrr_A           32 LRVNRAIQERLAALFDPGE-------------------GALVAALAGSGSLGMEAGLANLDR------------------   74 (353)
T ss_dssp             HHHHHHHHHHHHHHHCCCT-------------------TCEEEEESSCHHHHHHHHHHTCSC------------------
T ss_pred             HHHHHHHHHHHHHHhCCCC-------------------CCceEEEcCCcHHHHHHHHHHhcC------------------
Confidence            3445889999999999862                   234589999999999888765421                  


Q ss_pred             cCceEEEecCCCchHH--HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         240 NSRLVAYCSDQAHSSV--EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv--~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                         ..|++++.+|++.  .+.+...|.+++.||.++++.+|+++|+++|++.     .+.+|+.+.+++++|.+.|+++|
T Consensus        75 ---d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~i  146 (353)
T 2yrr_A           75 ---GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNPAEAI  146 (353)
T ss_dssp             ---CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECCHHHH
T ss_pred             ---CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecCHHHH
Confidence               2477888899885  3445667889999999988999999999999862     14478889999999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      .++|+++|+|+|+|++|+.+....+ ... .    .+|.+++++|||++.|.|+|+++
T Consensus       147 ~~l~~~~~~~li~D~a~~~~~~~~~-~~~-~----~~d~~~~s~~K~~~~~~g~G~~~  198 (353)
T 2yrr_A          147 GALAKEAGALFFLDAVTTLGMLPFS-MRA-M----GVDYAFTGSQKCLSAPPGLAPIA  198 (353)
T ss_dssp             HHHHHHHTCEEEEECTTTTTTSCCC-HHH-H----TCSEEECCTTSTTCCCSSCEEEE
T ss_pred             HHHHHHcCCeEEEEcCccccccccc-ccc-c----CceEEEecCcccccCCCceEEEE
Confidence            9999999999999999976543221 111 1    25999999999999999998763

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.78  E-value=1.4e-18  Score=168.34  Aligned_cols=166  Identities=7%  Similarity=-0.114  Sum_probs=132.6

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ..+..++.+++++++|.+.                   +....++|+|||+++. ++.+..                   
T Consensus        34 ~~~~~~~~~~la~~~~~~~-------------------~~~~v~~~~g~t~al~-~~~~~~-------------------   74 (384)
T 3zrp_A           34 VEALAYSLKGLRYVMGASK-------------------NYQPLIIPGGGTSAME-SVTSLL-------------------   74 (384)
T ss_dssp             HHHHHHHHHHHHHHHTCCT-------------------TSEEEEEESCHHHHHH-HGGGGC-------------------
T ss_pred             HHHHHHHHHHHHHHhCCCC-------------------CCcEEEEcCCcHHHHH-HHHhhc-------------------
Confidence            4455889999999999872                   2246899999999998 775432                   


Q ss_pred             cCceEEEecCCCchH--HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         240 NSRLVAYCSDQAHSS--VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       240 ~~~~vV~~S~~aH~S--v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      .++..|++++..|++  +...+...|.+++.||.++++.+|+++|+++|++..     +.+|+++.+++++|.+.|+++|
T Consensus        75 ~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i  149 (384)
T 3zrp_A           75 KPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSE-----YKLVALTHVETSTGVREPVKDV  149 (384)
T ss_dssp             CTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSC-----EEEEEEESEETTTTEECCHHHH
T ss_pred             CCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCC-----CcEEEEeCCCCCCceECcHHHH
Confidence            134578888889977  444455678899999999899999999999998731     5588888999999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      .++|++||+|+++|++|+.+....+     +.. ..+|.+++++||+++.|.|+|+++
T Consensus       150 ~~l~~~~~~~li~D~a~~~~~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~g~~~  201 (384)
T 3zrp_A          150 INKIRKYVELIVVDGVSSVGAEEVK-----AEE-WNVDVYLTASQKALGSAAGLGLLL  201 (384)
T ss_dssp             HHHHGGGEEEEEEECTTTTTTSCCC-----TTT-TTCSEEEEETTSTTCCCSSEEEEE
T ss_pred             HHHHHhcCCEEEEECcccccCcccc-----ccc-cCCCEEEecCcccccCCCceEEEE
Confidence            9999999999999999987654221     111 136999999999999899988764

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.77  E-value=2.8e-18  Score=167.76  Aligned_cols=167  Identities=14%  Similarity=0.005  Sum_probs=136.3

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ...+.+++.+++++++|.+                    .....++|+|||+|+..++.++..                 
T Consensus        65 ~~~~~~~~~~~la~~~g~~--------------------~~~~v~~t~g~t~al~~~~~~~~~-----------------  107 (393)
T 1vjo_A           65 FLALMDEIQSLLRYVWQTE--------------------NPLTIAVSGTGTAAMEATIANAVE-----------------  107 (393)
T ss_dssp             HHHHHHHHHHHHHHHHTCC--------------------CSCEEEESSCHHHHHHHHHHHHCC-----------------
T ss_pred             HHHHHHHHHHHHHHHhCCC--------------------CCcEEEEeCchHHHHHHHHHhccC-----------------
Confidence            3456689999999999986                    112589999999999998877632                 


Q ss_pred             hcCceEEEecCCCchH--HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         239 INSRLVAYCSDQAHSS--VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~S--v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                        ++..|++++.+|.+  +..++...|.+++.||.++++.+|+++|+++|++.     .+.+|+.+.+++++|.+.|+++
T Consensus       108 --~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~l~~  180 (393)
T 1vjo_A          108 --PGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETH-----RPAILALVHAETSTGARQPLEG  180 (393)
T ss_dssp             --TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTT
T ss_pred             --CCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhC-----CceEEEEeccCCCcceeccHHH
Confidence              23478899999998  88888888889999999888999999999999863     1347888899999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |.++|+++|+++++|++|+.+.... .    +.. ..+|.++.++||+++.|.++|+++
T Consensus       181 i~~l~~~~~~~li~Dea~~~g~~~~-~----~~~-~~~di~~~s~sK~l~~~~~~G~l~  233 (393)
T 1vjo_A          181 VGELCREFGTLLLVDTVTSLGGVPI-F----LDA-WGVDLAYSCSQKGLGCSPGASPFT  233 (393)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTSCC-C----TTT-TTCSEEECCSSSTTCSCSSCEEEE
T ss_pred             HHHHHHHcCCEEEEECCccccCcCC-c----ccc-cCccEEEEcCcccccCCCceEEEE
Confidence            9999999999999999999653211 1    111 246999999999999999888763

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.77  E-value=3.2e-18  Score=165.11  Aligned_cols=168  Identities=14%  Similarity=0.158  Sum_probs=135.4

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      +...+.+++.+++++++|.+.                     ...++|+|||+++..++.+......             
T Consensus        40 ~~~~~~~~~~~~la~~~~~~~---------------------~~i~~~~g~~~a~~~~~~~~~~~~~-------------   85 (382)
T 4hvk_A           40 KAREAVQEAREKVAKLVNGGG---------------------GTVVFTSGATEANNLAIIGYAMRNA-------------   85 (382)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTT---------------------EEEEEESSHHHHHHHHHHHHHHHHG-------------
T ss_pred             HHHHHHHHHHHHHHHHcCCCc---------------------CeEEEECCchHHHHHHHHHhhhhhc-------------
Confidence            445666899999999999862                     3589999999999998887653210             


Q ss_pred             hhcCceEEEecCCCchHHHHHHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                        .++..|+++..+|.++..++..   .|.+++.||+++++.+|+++|+++|++.      +.+|+.+.++|++|.+.|+
T Consensus        86 --~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~  157 (382)
T 4hvk_A           86 --RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPV  157 (382)
T ss_dssp             --GGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCH
T ss_pred             --CCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccC------ceEEEEECCCCCceeeCCH
Confidence              1345799999999999998753   5789999999999999999999998643      4588889999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|.++|++||+ +|+|+||+.+....+ ...  .+   +|.+++++||++ .|.|+|++|
T Consensus       158 ~~i~~l~~~~~~-li~D~a~~~~~~~~~-~~~--~~---~d~~~~s~~K~~-g~~g~g~~~  210 (382)
T 4hvk_A          158 EEISEVLAGKAA-LHIDATASVGQIEVD-VEK--IG---ADMLTISSNDIY-GPKGVGALW  210 (382)
T ss_dssp             HHHHHHHSSSSE-EEEECTTTBTTBCCC-HHH--HT---CSEEEEESGGGT-SCTTCEEEE
T ss_pred             HHHHHHHHHcCE-EEEEhHHhcCCCCCC-chh--cC---CCEEEEeHHHhc-CCCceEEEE
Confidence            999999999999 999999987754322 111  12   599999999974 577888764

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.77  E-value=6.3e-18  Score=163.47  Aligned_cols=163  Identities=13%  Similarity=0.093  Sum_probs=135.5

Q ss_pred             HHHHHH-HHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDF-VSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~w-La~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      .++.++ +++++|.+                       ..++|+|||+|+..++.++..                   ++
T Consensus        56 ~~l~~~~la~~~~~~-----------------------~v~~~~g~t~a~~~~~~~~~~-------------------~g   93 (371)
T 2e7j_A           56 HDFIHNQLPKFLGCD-----------------------VARVTNGAREAKFAVMHSLAK-------------------KD   93 (371)
T ss_dssp             HHHHHTHHHHHTTSS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TT
T ss_pred             HHHHHHHHHHHcCCC-----------------------EEEEeCChHHHHHHHHHHHhC-------------------CC
Confidence            788899 99998754                       479999999999998887632                   34


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEe--cCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIE--SDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp--~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      ..|++++.+|.++..++...|.+++.+|  .++++.+|+++|+++|++...+ ..+.+|+.+.+++++|.+.|+++|.++
T Consensus        94 d~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~  172 (371)
T 2e7j_A           94 AWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKV  172 (371)
T ss_dssp             CEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             CEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHH
Confidence            5799999999999999888888999999  8888999999999999864321 236688999999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|+|+++|+||+.+.... .... .    .+|.++.++||+++.|.++|+++
T Consensus       173 ~~~~~~~li~D~a~~~~~~~~-~~~~-~----~~di~~~s~sK~~~~~~~~G~~~  221 (371)
T 2e7j_A          173 CSEYDVPLLVNGAYAIGRMPV-SLKE-I----GADFIVGSGHKSMAASGPIGVMG  221 (371)
T ss_dssp             HHTTTCCEEEECTTTBTTBCC-CHHH-H----TCSEEEEEHHHHSSCCSSCEEEE
T ss_pred             HHHcCCeEEEECccccCCCCC-Chhh-c----CCCEEEecCCcCCCCCCCcEEEE
Confidence            999999999999999875421 1111 1    25999999999999999888863

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.77  E-value=6.1e-18  Score=165.02  Aligned_cols=165  Identities=13%  Similarity=0.006  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++++++++++|.+.                     ...++|+|||+++..++.++..                   
T Consensus        42 ~~~~~l~~~la~~~g~~~---------------------~~v~~t~g~t~a~~~~~~~~~~-------------------   81 (392)
T 2z9v_A           42 LLYEKVVDKAQKAMRLSN---------------------KPVILHGEPVLGLEAAAASLIS-------------------   81 (392)
T ss_dssp             HHHHHHHHHHHHHTTCSS---------------------CCEEESSCTHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHHHHhCCCC---------------------CEEEEeCCchHHHHHHHHHhcC-------------------
Confidence            344788999999999861                     3589999999999998876521                   


Q ss_pred             CceEEEecCCCchHHH--HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVE--KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~--kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ++..|++++.+|++..  +.+...|.+++.+|+++++.+|+++|+++|++..    .+.+|+.+.++++||.+.|+++|.
T Consensus        82 ~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~  157 (392)
T 2z9v_A           82 PDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHP----EITVVSVCHHDTPSGTINPIDAIG  157 (392)
T ss_dssp             TTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCT----TCCEEEEESEEGGGTEECCHHHHH
T ss_pred             CCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCC----CCcEEEEeccCCCCceeccHHHHH
Confidence            2346889999998873  2233457789999998888999999999997521    245788899999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|+|+|+|+||+.+....+ .+.    . .+|.++.++|||++.|.|+|+++
T Consensus       158 ~l~~~~~~~li~D~a~~~g~~~~~-~~~----~-~~d~~~~s~sK~~~~~~g~G~l~  208 (392)
T 2z9v_A          158 ALVSAHGAYLIVDAVSSFGGMKTH-PED----C-KADIYVTGPNKCLGAPPGLTMMG  208 (392)
T ss_dssp             HHHHHTTCEEEEECTTTBTTBSCC-GGG----G-TCSEEEECSSSTTCCCSCCEEEE
T ss_pred             HHHHHcCCeEEEEcccccCCcccc-ccc----c-cceEEEecCcccccCCCceeEEE
Confidence            999999999999999987644221 111    1 36999999999999999988763

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.77  E-value=5e-18  Score=164.58  Aligned_cols=167  Identities=13%  Similarity=0.132  Sum_probs=133.1

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ......++.+++++++|.+.                     ..+++|+|||+|+..++.+.+....              
T Consensus        41 ~~~~~~~l~~~la~~~g~~~---------------------~~v~~~~g~t~a~~~~~~~l~~~~~--------------   85 (382)
T 4eb5_A           41 AREAVQEAREKVAKLVNGGG---------------------GTVVFTSGATEANNLAIIGYAMRNA--------------   85 (382)
T ss_dssp             HHHHHHHHHHHHHHHHTCTT---------------------EEEEEESSHHHHHHHHHHHHHHHHG--------------
T ss_pred             HHHHHHHHHHHHHHHhCCCC---------------------CeEEEcCchHHHHHHHHHHHHhhcc--------------
Confidence            34555889999999999861                     3589999999999999988763210              


Q ss_pred             hcCceEEEecCCCchHHHHHHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHH
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLE  315 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~  315 (375)
                       .++..|++++.+|.++..++..   .|.+++.||+++++.+|+++|+++|+++      +.+|+.+.+++++|.+.|++
T Consensus        86 -~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~  158 (382)
T 4eb5_A           86 -RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVE  158 (382)
T ss_dssp             -GGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHH
T ss_pred             -CCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCC------CeEEEEeccCCCccccCCHH
Confidence             0245789999999999888753   5789999999888999999999998642      45788899999999999999


Q ss_pred             HHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|.++|+++|+| |+|+||+.+.... .....     .+|.++.++||+ +.|.|+|+++
T Consensus       159 ~i~~l~~~~~~~-i~D~a~~~g~~~~-~~~~~-----~~di~~~s~sK~-~g~~g~G~~~  210 (382)
T 4eb5_A          159 EISEVLAGKAAL-HIDATASVGQIEV-DVEKI-----GADMLTISSNDI-YGPKGVGALW  210 (382)
T ss_dssp             HHHHHHTTSSEE-EEECTTTBTTBCC-CHHHH-----TCSEEEEETGGG-TCCSSCEEEE
T ss_pred             HHHHHHHHCCCE-EEEcchhcCCccc-Ccccc-----CCCEEEeehHHh-cCCCceEEEE
Confidence            999999999999 9999999654321 11111     359999999998 5577888763

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.76  E-value=6.1e-18  Score=165.09  Aligned_cols=165  Identities=15%  Similarity=0.050  Sum_probs=130.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.+++++++|.+                    .....++|+|||+|+..++.++..                   
T Consensus        52 ~~~~~l~~~la~~~g~~--------------------~~~~i~~~~g~t~a~~~~~~~~~~-------------------   92 (393)
T 2huf_A           52 KIMDDIKEGVRYLFQTN--------------------NIATFCLSASGHGGMEATLCNLLE-------------------   92 (393)
T ss_dssp             HHHHHHHHHHHHHHTCC--------------------CSEEEEESSCHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCcEEEEcCcHHHHHHHHHHHHhC-------------------
Confidence            34478999999999986                    222578999999999998876521                   


Q ss_pred             CceEEEecCCCchHHH--HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVE--KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~--kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ++..|++++.+|++..  +.+...|.+++.+|.++++.+|+++|+++|++.     .+.+|+++.++|++|.+.|+++|+
T Consensus        93 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~  167 (393)
T 2huf_A           93 DGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQGLEGVG  167 (393)
T ss_dssp             TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHH
T ss_pred             CCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCCHHHHH
Confidence            2347888999998843  223446789999999888899999999999762     134788889999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|+++|+|+|++.+....+     +... .+|.+++++|||++.|.|+|+++
T Consensus       168 ~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~sK~l~g~~G~G~~~  218 (393)
T 2huf_A          168 ALCHQHNCLLIVDTVASLGGAPMF-----MDRW-EIDAMYTGSQKVLGAPPGITPVS  218 (393)
T ss_dssp             HHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEECCSSSTTCCCSSCEEEE
T ss_pred             HHHHHcCCEEEEEcccccCCCCcc-----hhhc-CccEEEECCCcccccCCCeEEEE
Confidence            999999999999999987643211     1111 36999999999998899988763

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.76  E-value=8.1e-18  Score=166.06  Aligned_cols=169  Identities=14%  Similarity=0.156  Sum_probs=136.6

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      +......++.+++++++|.+.                     ...+||+|||+|+..++.++++...             
T Consensus        65 ~~~~~~~~l~~~la~~~~~~~---------------------~~v~~~~ggt~a~~~a~~~l~~~~~-------------  110 (423)
T 3lvm_A           65 QAEEAVDIARNQIADLVGADP---------------------REIVFTSGATESDNLAIKGAANFYQ-------------  110 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCG---------------------GGEEEESSHHHHHHHHHHHHHHHHT-------------
T ss_pred             HHHHHHHHHHHHHHHHcCCCC---------------------CeEEEeCChHHHHHHHHHHHHHhhc-------------
Confidence            445566889999999999862                     3589999999999999987765321             


Q ss_pred             hhcCceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                        .++..|+++..+|.++..++.   ..+.+++.+|.++++.+|+++|+++|+++      +.+|+++.+++++|.+.|+
T Consensus       111 --~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l  182 (423)
T 3lvm_A          111 --KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDD------TILVSIMHVNNEIGVVQDI  182 (423)
T ss_dssp             --TTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCH
T ss_pred             --cCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCC------cEEEEEeCCCCCCccccCH
Confidence              134579999999999988874   35889999999999999999999998653      5588888899999999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|+++|++|++|+||+++.....     .... .+|.+++++||+ +.|.++|+++
T Consensus       183 ~~i~~l~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~sK~-~g~~g~G~~~  236 (423)
T 3lvm_A          183 AAIGEMCRARGIIYHVDATQSVGKLPID-----LSQL-KVDLMSFSGHKI-YGPKGIGALY  236 (423)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTS-CCSEEEEESTTT-TSCSSCEEEE
T ss_pred             HHHHHHHHHcCCEEEEEhhhhcCCCCcC-----hhhc-CCCEEEechHHh-cCCCCeEEEE
Confidence            9999999999999999999998754221     1111 369999999995 5688888763

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.76  E-value=9.9e-18  Score=162.66  Aligned_cols=168  Identities=8%  Similarity=-0.081  Sum_probs=126.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .+++++++++++....                 .+....+||+|||+++..++.+....    .            .++.
T Consensus        41 ~~~~~~l~~~~~~~~~-----------------~~~~~v~~~~g~t~al~~~~~~~~~~----~------------~~gd   87 (385)
T 2bkw_A           41 QRVLKNTRAVFKSAAA-----------------SKSQPFVLAGSGTLGWDIFASNFILS----K------------APNK   87 (385)
T ss_dssp             HHHHHHHHHHTTCCGG-----------------GTCEEEEEESCTTHHHHHHHHHHSCT----T------------CSCC
T ss_pred             HHHHHHHHHHhCCCCC-----------------CCCceEEEcCchHHHHHHHHHHHhcc----C------------CCCC
Confidence            5678888888886510                 02346899999999999988765310    0            0233


Q ss_pred             EEEecCC--CchHHHHHHHHcCCeEEEEec-CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQ--AHSSVEKAGLIGLVKMRYIES-DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~--aH~Sv~kaa~lg~~~v~~Vp~-d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|++.+.  .|.++.+++...|.+++.||+ ++++.+|+++|+++|++.     .+.+|+++.+++++|.+.|+++|+++
T Consensus        88 ~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~l~~i~~~  162 (385)
T 2bkw_A           88 NVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQN-----SYGAVTVTHVDTSTAVLSDLKAISQA  162 (385)
T ss_dssp             EEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECCHHHHHHH
T ss_pred             eEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcC-----CCCEEEEEccCCCcCeEcCHHHHHHH
Confidence            4544433  345555666777889999999 888999999999999762     14478888999999999999999999


Q ss_pred             HHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++  |+++|+|+||+.+....+     +... .+|.+++++|||++.|.|+|+++
T Consensus       163 ~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~G~G~~~  213 (385)
T 2bkw_A          163 IKQTSPETFFVVDAVCSIGCEEFE-----FDEW-GVDFALTASQKAIGAPAGLSISL  213 (385)
T ss_dssp             HHHHCTTSEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSCEEEEE
T ss_pred             HHhhCCCCEEEEECccccCCcccc-----cccc-CceEEEecCccccccCCcceEEE
Confidence            9999  999999999987643211     1111 36999999999999999988763

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.76  E-value=8.6e-18  Score=164.21  Aligned_cols=161  Identities=17%  Similarity=0.057  Sum_probs=129.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+.                    ....++|+|||+++..++.+...                   ++.
T Consensus        54 ~~l~~~la~~~~~~~--------------------~~~v~~~~g~t~al~~~~~~~~~-------------------~gd   94 (396)
T 2ch1_A           54 DEVKDGLRYIFQTEN--------------------RATMCVSGSAHAGMEAMLSNLLE-------------------EGD   94 (396)
T ss_dssp             HHHHHHHHHHHTCCC--------------------SCEEEESSCHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCCC--------------------CcEEEECCcHHHHHHHHHHHhcC-------------------CCC
Confidence            788999999999872                    12578999999999988876522                   234


Q ss_pred             EEEecCCCchHHH--HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVE--KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       244 vV~~S~~aH~Sv~--kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      .|++++.+|.+..  +.+...|.+++.||.++++.+|+++|+++|++..     +.+|+++.++|++|.+.|+++|.++|
T Consensus        95 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~  169 (396)
T 2ch1_A           95 RVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQ-----PKCLFLTHGDSSSGLLQPLEGVGQIC  169 (396)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHH
T ss_pred             eEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCCceecCHHHHHHHH
Confidence            7889999999874  3556778899999998889999999999998631     34788889999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +++|+++++|+||+.+....+     +... .+|.++.++||+++.|.++|++
T Consensus       170 ~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~  216 (396)
T 2ch1_A          170 HQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITPI  216 (396)
T ss_dssp             HHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEEE
T ss_pred             HHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCCeEEE
Confidence            999999999999996533211     1111 3699999999999999998876

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.75  E-value=6.6e-18  Score=165.22  Aligned_cols=167  Identities=16%  Similarity=0.114  Sum_probs=134.7

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ...+.+++.+++++++|.+.                     ...++|+|||+|+..++.+.+.....             
T Consensus        61 ~~~~~~~l~~~la~~~~~~~---------------------~~v~~~~g~t~al~~~~~~l~~~~~~-------------  106 (400)
T 3vax_A           61 AKRGVERAREYLASTVSAEP---------------------DELIFTSGATESNNIALLGLAPYGER-------------  106 (400)
T ss_dssp             HHHHHHHHHHHHHHHTTCCG---------------------GGEEEESCHHHHHHHHHHTTHHHHHH-------------
T ss_pred             HHHHHHHHHHHHHHHcCCCC---------------------CcEEEeCCHHHHHHHHHHHHHHhhcc-------------
Confidence            34555889999999999861                     35899999999999998877532111             


Q ss_pred             hcCce-EEEecCCCchHHHHHHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         239 INSRL-VAYCSDQAHSSVEKAGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       239 ~~~~~-vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                        ++. .|+++..+|.++..++..   .|.+++.||.++++.+|+++|+++|++.      +.+|+++.+++++|.+.|+
T Consensus       107 --~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l  178 (400)
T 3vax_A          107 --TGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRPD------TLLVSLMHVNNETGVIQPV  178 (400)
T ss_dssp             --HTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCTT------EEEEECCSBCTTTCBBCCH
T ss_pred             --CCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCCC------ceEEEEECCCCCceeeCcH
Confidence              245 788999999999887643   5789999999999999999999998643      5588888999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|.++|+++|+++++|++|+.+....     .+..+  +|.++.++||+ +.|.|+|+++
T Consensus       179 ~~i~~la~~~~~~li~D~a~~~~~~~~-----~~~~~--~d~~~~s~~K~-~g~~g~g~~~  231 (400)
T 3vax_A          179 AELAQQLRATPTYLHVDAAQGYGKVPG-----DLTTP--IDMISISGHKI-GAPKGVGALV  231 (400)
T ss_dssp             HHHHHHHTTSSCEEEEECTTTTTTSGG-----GGGSC--CSEEEEETGGG-TSCSSCEEEE
T ss_pred             HHHHHHHHhcCCEEEEEhhhhcCCCCc-----Chhhc--CcEEEEeHHHh-CCCCceEEEE
Confidence            999999999999999999998765321     12233  79999999995 5688888764

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.75  E-value=1.8e-17  Score=160.51  Aligned_cols=166  Identities=17%  Similarity=0.159  Sum_probs=131.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .....++.+++++++|.+.                     ...++|+|||+++..++.+++...   .            
T Consensus        43 ~~~~~~l~~~la~~~g~~~---------------------~~v~~~~g~t~a~~~~~~~~~~~~---~------------   86 (384)
T 1eg5_A           43 NLHMEKAREKVAKVLGVSP---------------------SEIFFTSCATESINWILKTVAETF---E------------   86 (384)
T ss_dssp             HHHHHHHHHHHHHHHTSCG---------------------GGEEEESCHHHHHHHHHHHHHHHT---T------------
T ss_pred             HHHHHHHHHHHHHHcCCCC---------------------CeEEEECCHHHHHHHHHHhhhhhc---c------------
Confidence            3444788999999999761                     358999999999999988876310   0            


Q ss_pred             cCceEEEecCCCchHHHHHH---HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAG---LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa---~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      .++..|++++.+|.++..++   ...|.+++.||.++++.+|+++|+++|+++      +.+|+++.+++++|.+.|+++
T Consensus        87 ~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~  160 (384)
T 1eg5_A           87 KRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDED------TFLVSIMAANNEVGTIQPVED  160 (384)
T ss_dssp             TTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHH
T ss_pred             CCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCCC------CeEEEEECCCCCcccccCHHH
Confidence            12457899999999998776   456889999999888999999999998642      557888899999999999999


Q ss_pred             HHHHHHhcC--CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         317 LGPICEKEG--LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~--iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |.++|+++|  +++++|+||+.+.... .    +..+ .+|.+++++||++ .|.|+|++
T Consensus       161 i~~l~~~~~~~~~li~Dea~~~~~~~~-~----~~~~-~~di~~~s~sK~~-g~~G~G~~  213 (384)
T 1eg5_A          161 VTRIVKKKNKETLVHVDAVQTIGKIPF-S----LEKL-EVDYASFSAHKFH-GPKGVGIT  213 (384)
T ss_dssp             HHHHHHHHCTTCEEEEECTTTTTTSCC-C----CTTT-CCSEEEEEGGGGT-SCTTCEEE
T ss_pred             HHHHHHhcCCceEEEEEhhhhcCCccc-C----chhc-CCCEEEecHHHhc-CCCceEEE
Confidence            999999999  9999999998543211 1    1122 3799999999985 56677875

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.75  E-value=1.6e-18  Score=166.53  Aligned_cols=171  Identities=17%  Similarity=0.170  Sum_probs=126.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ..++.++.+|+++++| +.                     ...+||+|||+|+..++.+++.                  
T Consensus        42 ~~~~~~l~~~la~~~g-~~---------------------~~v~~~~~gt~a~~~al~~~~~------------------   81 (356)
T 1v72_A           42 DELTAQVKRKFCEIFE-RD---------------------VEVFLVPTGTAANALCLSAMTP------------------   81 (356)
T ss_dssp             SHHHHHHHHHHHHHHT-SC---------------------CEEEEESCHHHHHHHHHHTSCC------------------
T ss_pred             chHHHHHHHHHHHHhC-CC---------------------CcEEEeCCccHHHHHHHHHhcC------------------
Confidence            3445889999999998 41                     2479999999999998876542                  


Q ss_pred             cCceEEEecCCCchHHHHH--HHHc--CCeEEEEecCCCCCcCHHHHHH-HHHHhh-hcCCccEEEEEEcCCCCccc---
Q psy1596         240 NSRLVAYCSDQAHSSVEKA--GLIG--LVKMRYIESDDKLSLRGDKLIE-AIERDK-KKHLIPFFVCGTLGTTGACA---  310 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~ka--a~lg--~~~v~~Vp~d~~g~md~e~Le~-aI~~~~-~~g~~p~~Vv~t~GtT~tGa---  310 (375)
                       ++..|+++..+|++...+  +...  |.+++.||.+ ++.+|+++|++ +|++.. ..+..+.+|+++.++ ++|.   
T Consensus        82 -~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~~~  158 (356)
T 1v72_A           82 -PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSIYT  158 (356)
T ss_dssp             -TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCCCC
T ss_pred             -CCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCccCC
Confidence             345788999999998876  6544  7889999885 57899999999 886421 122246677777765 5999   


Q ss_pred             cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596         311 FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV-EYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       311 vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi-e~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+++++|+++|++||+|+|+|++|+.+............++ ..+|.+++++||+ +.|.|+|++
T Consensus       159 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~  222 (356)
T 1v72_A          159 LDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIV  222 (356)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEE
T ss_pred             HHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEE
Confidence            78899999999999999999999986432111101111112 2579999999999 669988776

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.75  E-value=6.2e-18  Score=162.26  Aligned_cols=175  Identities=17%  Similarity=0.178  Sum_probs=131.7

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |...+++++.+|+++++|.+                     ....++|+|||+|+..++.+++.                
T Consensus        46 g~~~~~~~~~~~l~~~~g~~---------------------~~~v~~~~g~t~a~~~~~~~~~~----------------   88 (359)
T 1svv_A           46 GQDSHCAKAARLIGELLERP---------------------DADVHFISGGTQTNLIACSLALR----------------   88 (359)
T ss_dssp             TCSHHHHHHHHHHHHHHTCT---------------------TSEEEEESCHHHHHHHHHHHHCC----------------
T ss_pred             cccHHHHHHHHHHHHHhCCC---------------------CccEEEeCCchHHHHHHHHHHhC----------------
Confidence            44567799999999999965                     24589999999999999887643                


Q ss_pred             hhcCceEEEecCCCchHHHHH--HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhh-hcCCccEEEEEEcCCCCcccccc-
Q psy1596         238 EINSRLVAYCSDQAHSSVEKA--GLIGLVKMRYIESDDKLSLRGDKLIEAIERDK-KKHLIPFFVCGTLGTTGACAFDN-  313 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~ka--a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~-~~g~~p~~Vv~t~GtT~tGavDp-  313 (375)
                         ++..|++++.+|.++..+  +...|.+++.+|.+ ++.+|+++|++++++.. +.+..+.+|+++.+ +++|.+.| 
T Consensus        89 ---~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~  163 (359)
T 1svv_A           89 ---PWEAVIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTK  163 (359)
T ss_dssp             ---TTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCH
T ss_pred             ---CCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCH
Confidence               245799999999999884  66778899999986 78899999999998652 22334667777777 67999876 


Q ss_pred             --HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC-CcccEEEEcCcccCCCCCcceeeC
Q psy1596         314 --LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV-EYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       314 --l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi-e~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                        +++|+++|++||+|+|+|++|+++..-........-++ ..+|++++++||++ .|.++|+++
T Consensus       164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~~~g~l~  227 (359)
T 1svv_A          164 QELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAG-GMFGEALII  227 (359)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSSCEEEEE
T ss_pred             HHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCC-CCCceEEEE
Confidence              99999999999999999999944321110000000000 14699999999985 488888763

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.75  E-value=1.4e-17  Score=159.93  Aligned_cols=165  Identities=10%  Similarity=0.021  Sum_probs=128.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++++++++|.+.                   +....++|+|||+|+..++.+++..                  .+.
T Consensus        40 ~~l~~~la~~~g~~~-------------------~~~~v~~~~g~t~a~~~~~~~~~~~------------------gd~   82 (366)
T 1m32_A           40 EQIRQQLTALATASE-------------------GYTSVLLQGSGSYAVEAVLGSALGP------------------QDK   82 (366)
T ss_dssp             HHHHHHHHHHHCSSS-------------------SEEEEEEESCHHHHHHHHHHHSCCT------------------TCC
T ss_pred             HHHHHHHHHHhCCCC-------------------cCcEEEEecChHHHHHHHHHHhcCC------------------CCe
Confidence            778899999999431                   1235899999999999988776420                  122


Q ss_pred             EEEecCCCchH-HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSS-VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~S-v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      +++.+...|.+ +..++...|.+++.+|.++++.+|+++|+++|++..    .+.+|+.+.+++++|.+.|+++|.++|+
T Consensus        83 vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~  158 (366)
T 1m32_A           83 VLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAH  158 (366)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHH
T ss_pred             EEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHH
Confidence            56666788876 455566667889999998889999999999998642    1447778888899999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +||+|+|+|+||+.+....+     +... .+|.++.++|||++.|.|+|+++
T Consensus       159 ~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~~K~~~~~~g~G~~~  205 (366)
T 1m32_A          159 RYGKTYIVDAMSSFGGIPMD-----IAAL-HIDYLISSANKCIQGVPGFAFVI  205 (366)
T ss_dssp             HHTCEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSSEEEEE
T ss_pred             HcCCEEEEECCccccCcCcc-----cccc-CccEEEecCcccccCCCceEEEE
Confidence            99999999999987643211     1111 36999999999998899988763

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.74  E-value=9.2e-18  Score=160.92  Aligned_cols=160  Identities=9%  Similarity=-0.081  Sum_probs=127.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++++++++++|.+.                     ...++|+|||+|+..++.+...                   
T Consensus        34 ~~~~~l~~~la~~~g~~~---------------------~~i~~~~g~t~a~~~~~~~~~~-------------------   73 (352)
T 1iug_A           34 EVFLKARGLLREAFRTEG---------------------EVLILTGSGTLAMEALVKNLFA-------------------   73 (352)
T ss_dssp             HHHHHHHHHHHHHHTCSS---------------------EEEEEESCHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHHHHhCCCC---------------------ceEEEcCchHHHHHHHHHhccC-------------------
Confidence            344789999999999861                     3589999999999998876532                   


Q ss_pred             CceEEEecCCCchHHH--HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVE--KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~--kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ++..|++++.+|++..  +.+...|.+++.||.++++.+|+++|++   +      .+.+|+.+.++|++|.+.|+++|.
T Consensus        74 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~------~~~~v~~~~~~nptG~~~~l~~i~  144 (352)
T 1iug_A           74 PGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK---E------GYAGLLLVHSETSTGALADLPALA  144 (352)
T ss_dssp             TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC---S------SCSEEEEESEETTTTEECCHHHHH
T ss_pred             CCCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc---c------CCcEEEEEEecCCcceecCHHHHH
Confidence            2357889999999976  2334467899999998888999998876   1      245788899999999999999999


Q ss_pred             HHHHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++  |+|+|+|+||+.+....+ ...    . .+|.++.++|||++.|.|+|+++
T Consensus       145 ~l~~~~~~~~~li~D~a~~~~~~~~~-~~~----~-~~d~~~~s~~K~~~~~~g~G~~~  197 (352)
T 1iug_A          145 RAFKEKNPEGLVGADMVTSLLVGEVA-LEA----M-GVDAAASGSQKGLMCPPGLGFVA  197 (352)
T ss_dssp             HHHHHHCTTCEEEEECTTTBTTBCCC-SGG----G-TCSEEEEESSSTTCCCSCEEEEE
T ss_pred             HHHHhhCCCCEEEEECCccccCccee-ccc----c-CeeEEEecCcccccCCCceeEEE
Confidence            999999  999999999986543221 111    1 36999999999999999988764

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.74  E-value=4.3e-18  Score=163.59  Aligned_cols=157  Identities=11%  Similarity=-0.034  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      +.+++.+++++++|.+                    ++...++|+|||+++..++.+...                   +
T Consensus        44 ~~~~~~~~la~~~g~~--------------------~~~~v~~~~g~t~al~~~~~~l~~-------------------~   84 (362)
T 3ffr_A           44 VYKTASDNLKTLLELP--------------------SNYEVLFLASATEIWERIIQNCVE-------------------K   84 (362)
T ss_dssp             HHHHHHHHHHHHTTCC--------------------TTEEEEEESCHHHHHHHHHHHHCS-------------------S
T ss_pred             HHHHHHHHHHHHhCCC--------------------CCcEEEEeCCchHHHHHHHHhccC-------------------C
Confidence            3388999999999987                    335689999999999888876431                   2


Q ss_pred             ceEEEecCCCchHH--HHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         242 RLVAYCSDQAHSSV--EKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv--~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                        .+++....|++.  ...+...|.+++.|+.++++.+|+++|+  +.+      .+.+|+.+.++|++|.+.|+++|++
T Consensus        85 --~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~------~~~~v~~~~~~nptG~~~~l~~i~~  154 (362)
T 3ffr_A           85 --KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VPA------DAEIICLTHNETSSGVSMPVEDINT  154 (362)
T ss_dssp             --EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CCT------TCCEEEEESEETTTTEECCHHHHTT
T ss_pred             --cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--ccC------CccEEEEEcCCCCcceeCCHHHHHH
Confidence              345555666662  2344566889999999888999999998  322      2558888899999999999999999


Q ss_pred             HHHhc-CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         320 ICEKE-GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       320 ia~~~-~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|++| |+|+|+|+||+.+....        .+..+|.++.++|||++.|.|+|+++
T Consensus       155 la~~~p~~~li~D~a~~~~~~~~--------~~~~~d~~~~s~~K~~~~~~G~g~~~  203 (362)
T 3ffr_A          155 FRDKNKDALIFVDAVSSLPYPKF--------DWTKIDSVFFSVQKCFGLPAGLGVWI  203 (362)
T ss_dssp             SGGGSTTSEEEEECTTTTTSSCC--------CTTSCSEEEEETTSTTCCCSCCEEEE
T ss_pred             HHHhCCCCEEEEecccccCCccc--------ChhHCcEEEEecccccCCCCceEEEE
Confidence            99999 99999999998765321        12237999999999999899988763

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.73  E-value=3.7e-17  Score=160.42  Aligned_cols=165  Identities=12%  Similarity=0.103  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      ..++.+++++++|.+                    +....++|+|||+|+..++.+++...   .            .++
T Consensus        74 ~~~l~~~la~~~~~~--------------------~~~~v~~~~g~t~a~~~~~~~~~~~~---~------------~~g  118 (420)
T 1t3i_A           74 YEAVRNKVAKFINAR--------------------SPREIVYTRNATEAINLVAYSWGMNN---L------------KAG  118 (420)
T ss_dssp             HHHHHHHHHHHTTCS--------------------CGGGEEEESSHHHHHHHHHHHTHHHH---C------------CTT
T ss_pred             HHHHHHHHHHHcCCC--------------------CCCeEEEcCChHHHHHHHHHHhhhcc---c------------CCC
Confidence            377889999999983                    12358999999999999988874210   0            134


Q ss_pred             eEEEecCCCchH----HHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         243 LVAYCSDQAHSS----VEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       243 ~vV~~S~~aH~S----v~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ..|++++.+|.+    +...+...|.+++.||.++++.+|+++|+++|+++      +.+|+.+.+++++|.+.|+++|.
T Consensus       119 d~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~  192 (420)
T 1t3i_A          119 DEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEIA  192 (420)
T ss_dssp             CEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHH
T ss_pred             CEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCC------ceEEEEeCCcccccCcCCHHHHH
Confidence            578899999998    45555666789999999988999999999998642      55888899999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|+|+++|+||+.+.... ..+..  +   +|.++.++|| ++.|.|+|+++
T Consensus       193 ~l~~~~~~~li~D~a~~~~~~~~-~~~~~--~---~di~~~s~sK-~~~~~g~G~~~  242 (420)
T 1t3i_A          193 QLAHQAGAKVLVDACQSAPHYPL-DVQLI--D---CDWLVASGHK-MCAPTGIGFLY  242 (420)
T ss_dssp             HHHHHTTCEEEEECTTTTTTSCC-CHHHH--T---CSEEEEEGGG-TTSCTTCEEEE
T ss_pred             HHHHHcCCEEEEEhhhccCCccC-chhhc--C---CCEEEEehhh-hcCCCceEEEE
Confidence            99999999999999999875421 22221  2   5999999999 55688888763

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.73  E-value=3e-17  Score=159.25  Aligned_cols=164  Identities=12%  Similarity=0.071  Sum_probs=126.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEE-EeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFIT-FQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gv-ftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .+.+++.+|+++++|.+                    .....+ +|+|||+++..++.+...                  
T Consensus        52 ~~~~~~~~~la~~~g~~--------------------~~~~~i~~~~ggt~al~~~~~~~~~------------------   93 (376)
T 3f0h_A           52 STMLENEKFMLEYAKAP--------------------EGSKAVFMTCSSTGSMEAVVMNCFT------------------   93 (376)
T ss_dssp             HHHHHHHHHHHHHHTCC--------------------TTCEEEEESSCHHHHHHHHHHHHCC------------------
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCceEEEEcCChhHHHHHHHHhccC------------------
Confidence            45578999999999998                    222344 488999999988876532                  


Q ss_pred             cCceEEEecCCCchHHH--HHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         240 NSRLVAYCSDQAHSSVE--KAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~--kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                       ++..|+++...+++..  ..+...+.+++.++.+.++.+|+++|+++++++      +.+|+.+.++|++|.+.|+++|
T Consensus        94 -~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~------~~~v~~~~~~nptG~~~~l~~i  166 (376)
T 3f0h_A           94 -KKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQN------FTGLLVNVDETSTAVLYDTMMI  166 (376)
T ss_dssp             -TTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSC------CCEEEEESEETTTTEECCHHHH
T ss_pred             -CCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccC------ceEEEEecccCCcceecCHHHH
Confidence             2345667766665533  234566889999999888999999999876432      4578888889999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|++||+++++|++++++....+ +..  .+   +|.+++++||+++.|.|+|+++
T Consensus       167 ~~l~~~~~~~li~D~~~~~~~~~~~-~~~--~~---~d~~~~s~~K~l~~~~G~g~~~  218 (376)
T 3f0h_A          167 GEFCKKNNMFFVCDCVSAFLADPFN-MNE--CG---ADVMITGSQKVLACPPGISVIV  218 (376)
T ss_dssp             HHHHHHTTCEEEEECTTTTTTSCCC-HHH--HT---CSEEEEETTTTTCCCSSCEEEE
T ss_pred             HHHHHHcCCEEEEEcCccccCcccc-ccc--cC---ccEEEecCcccccCCCceEEEE
Confidence            9999999999999999998754321 111  13   5999999999999888888763

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.72  E-value=6.8e-17  Score=160.28  Aligned_cols=182  Identities=12%  Similarity=0.061  Sum_probs=132.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHH-hhccCCc-chh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRK-YQQSHPE-LEH  236 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~-~~~~~~~-~~~  236 (375)
                      ...+..++++++++++|.+.                     ...+||+|||+++..++.++....... .+.+..- ...
T Consensus        59 ~~~~~~~l~~~la~~~g~~~---------------------~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~  117 (432)
T 3a9z_A           59 AKDIINTARASLAKMIGGKP---------------------QDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQIS  117 (432)
T ss_dssp             HHHHHHHHHHHHHHHHTCCG---------------------GGEEEESCHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHHHHHHcCCCc---------------------CeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccc
Confidence            34455789999999999861                     358999999999999988875321110 0000000 000


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                      ..-.....|+++..+|.|+.+++.    ..|.+++.||.++ ++.+|+++|+++|++.      +.+|+++.+++++|.+
T Consensus       118 p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~  191 (432)
T 3a9z_A          118 PEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPT------TCLVTIMLANNETGVI  191 (432)
T ss_dssp             ----CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTT------EEEEECCSBCTTTCBB
T ss_pred             cccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCC------ceEEEEECcccCcccc
Confidence            000112478999999999988763    2578999999875 7899999999988642      5588889999999999


Q ss_pred             ccHHHHHHHHHhcC----------CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         312 DNLEELGPICEKEG----------LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       312 Dpl~eI~~ia~~~~----------iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      .|+++|.++|++++          +|+|+|+||+.+.... ....  .   .+|.+++++|||++ |. +|+++
T Consensus       192 ~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~-~~~~--~---~~d~~~~s~~K~~g-~~-~G~~~  257 (432)
T 3a9z_A          192 MPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRV-DVED--L---GVDFLTIVGHKFYG-PR-IGALY  257 (432)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCC-CHHH--H---CCSEEEEEGGGTTC-CS-CEEEE
T ss_pred             cCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCccc-Chhh--c---CCCEEEEehhHhcC-Cc-ceEEE
Confidence            99999999999999          9999999998764321 1221  1   36999999999875 66 88763

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.71  E-value=4.6e-17  Score=159.75  Aligned_cols=164  Identities=12%  Similarity=0.039  Sum_probs=127.5

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .....++.+++++++|.+.                     ...+||+|||+++..++.+....                .
T Consensus        68 ~~~~~~l~~~la~~~g~~~---------------------~~v~~~~g~t~al~~~~~~l~~~----------------~  110 (406)
T 3cai_A           68 AAVLDAAREAVADLVNADP---------------------GGVVLGADRAVLLSLLAEASSSR----------------A  110 (406)
T ss_dssp             HHHHHHHHHHHHHHHTCCG---------------------GGEEEESCHHHHHHHHHHHTGGG----------------G
T ss_pred             HHHHHHHHHHHHHHhCCCC---------------------CeEEEeCChHHHHHHHHHHHhhc----------------c
Confidence            3444789999999999861                     35899999999987776543110                0


Q ss_pred             cCceEEEecCCCchHHHHHHHH----cCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLI----GLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~l----g~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                      .++..|+++..+|.++..++..    .|.+++.||.+ +++.+|+++|+++|+++      +.+|+++.+++++|.+.|+
T Consensus       111 ~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l  184 (406)
T 3cai_A          111 GLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKS------TRLVAVNSASGTLGGVTDL  184 (406)
T ss_dssp             BTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCTT------EEEEEEESBCTTTCBBCCC
T ss_pred             CCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCCC------ceEEEEeCCcCCccccCCH
Confidence            1345788999999998776642    57799999998 78999999999998643      5588889999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce-ee
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT-AM  374 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g-~l  374 (375)
                      ++|.++|+++|+++|+|+||+.+....+ ... . +   +|.+++++|||++ |. +| ++
T Consensus       185 ~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~-~-~---~d~~~~s~~K~~g-~~-~G~~~  237 (406)
T 3cai_A          185 RAMTKLVHDVGALVVVDHSAAAPYRLLD-IRE-T-D---ADVVTVNAHAWGG-PP-IGAMV  237 (406)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTCCCC-HHH-H-C---CSEEEEEGGGGTS-CS-CEEEE
T ss_pred             HHHHHHHHHcCCEEEEEcccccCCCCCC-chh-c-C---CCEEEeehhhhcC-CC-cCeEE
Confidence            9999999999999999999987654222 221 1 3   5999999999875 65 77 65

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.71  E-value=2.6e-16  Score=158.55  Aligned_cols=166  Identities=10%  Similarity=0.016  Sum_probs=128.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+|+++++|.+.                     ...+||+|+|+++..++.+....          +      .++.
T Consensus       114 ~~l~~~la~~~g~~~---------------------~~v~~t~g~t~al~~~~~~~~~~----------~------~~~~  156 (465)
T 3e9k_A          114 ESIVGLMKDIVGANE---------------------KEIALMNALTVNLHLLMLSFFKP----------T------PKRY  156 (465)
T ss_dssp             HHHHGGGHHHHTCCG---------------------GGEEECSCHHHHHHHHHHHHCCC----------C------SSSC
T ss_pred             HHHHHHHHHHcCCCc---------------------CCEEEECCHHHHHHHHHHHhccc----------c------CCCC
Confidence            678999999999872                     35899999999988877665320          0      1245


Q ss_pred             EEEecCCCchHHHH----HHHHcCCe-----EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVK-----MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~-----v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                      .|+++..+|.+...    .++..|.+     +..+|.++++.+|+++|+++|++...   .+.+|+.+..++.+|.+.|+
T Consensus       157 ~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~---~~~lv~~~~~~n~tG~~~~l  233 (465)
T 3e9k_A          157 KILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGD---SIAVILFSGVHFYTGQHFNI  233 (465)
T ss_dssp             EEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGG---GEEEEEEESBCTTTCBBCCH
T ss_pred             EEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCC---CeEEEEEeCcccCcceeecH
Confidence            79999999988655    34445554     34557778899999999999985421   25688999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC-CCCcceeeC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM-VHFDCTAMW  375 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l~  375 (375)
                      ++|.++|+++|+++|+|+||+.+..... ...  .   .+|.+++++||++. .|.++|++|
T Consensus       234 ~~i~~la~~~g~~vi~D~a~~~g~~~~~-~~~--~---~~D~~~~s~~K~l~~gp~~~g~l~  289 (465)
T 3e9k_A          234 PAITKAGQAKGCYVGFDLAHAVGNVELY-LHD--W---GVDFACWCSYKYLNAGAGGIAGAF  289 (465)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTSCCC-HHH--H---TCCEEEECSSSTTCCCTTCCCEEE
T ss_pred             HHHHHHHHHcCCEEEEEhhhhcCCcCCc-hhh--c---CCCEEEECcccccccCCCceEEEE
Confidence            9999999999999999999998865432 111  1   36999999999994 788888764

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.71  E-value=6.7e-17  Score=157.65  Aligned_cols=167  Identities=13%  Similarity=0.012  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.+++++++|.+                    +....+||+|||+|+..++.+++...   .            .
T Consensus        67 ~~~~~l~~~la~~~~~~--------------------~~~~v~~~~g~t~a~~~~~~~~~~~~---~------------~  111 (406)
T 1kmj_A           67 EKMENVRKRASLFINAR--------------------SAEELVFVRGTTEGINLVANSWGNSN---V------------R  111 (406)
T ss_dssp             HHHHHHHHHHHHHTTCS--------------------CGGGEEEESSHHHHHHHHHHHTHHHH---C------------C
T ss_pred             HHHHHHHHHHHHHcCCC--------------------CCCeEEEeCChhHHHHHHHHHhhhhc---C------------C
Confidence            33478899999999983                    12358999999999999998875321   0            1


Q ss_pred             CceEEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      ++..|++++.+|.+...+    +...|.+++.+|.++++.+|+++|+++|+++      +.+|+.+.+++++|.+.|+++
T Consensus       112 ~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~  185 (406)
T 1kmj_A          112 AGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAE  185 (406)
T ss_dssp             TTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHH
T ss_pred             CCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccC------CeEEEEeCCCccccCcCCHHH
Confidence            345788999999876543    4556789999999888999999999998642      558888999999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|++||+++++|++|+.+.... .... .    .+|.++.++||++ .|.|+|+++
T Consensus       186 i~~l~~~~~~~li~D~~~~~g~~~~-~~~~-~----~~d~~~~s~~K~~-g~~G~G~~~  237 (406)
T 1kmj_A          186 MITLAHQHGAKVLVDGAQAVMHHPV-DVQA-L----DCDFYVFSGHKLY-GPTGIGILY  237 (406)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTSCC-CHHH-H----TCSEEEEEGGGTT-SCTTCEEEE
T ss_pred             HHHHHHHcCCEEEEEchhhcCCCCC-cccc-c----CCCEEEEEchhcc-CCCCcEEEE
Confidence            9999999999999999999875422 1221 1    2699999999977 677788763

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.70  E-value=1.3e-16  Score=171.76  Aligned_cols=168  Identities=17%  Similarity=0.133  Sum_probs=130.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ....+.+++++|.+                      ...++++|+|+||..++.+...                   ++.
T Consensus       208 ~~~ee~la~l~G~d----------------------~~i~~~~Gtt~a~~~~i~al~~-------------------~GD  246 (755)
T 2vyc_A          208 GESEKYAARVFGAD----------------------RSWSVVVGTSGSNRTIMQACMT-------------------DND  246 (755)
T ss_dssp             HHHHHHHHHHHTCS----------------------EEEEESSHHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC----------------------ceEEECCcHHHHHHHHHHHhcC-------------------CCC
Confidence            67778888988876                      1345666667888888876532                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCC-----CCc-----CHHHHHHHHHHh--h--hcCCccEEEEEEcCCCCcc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-----LSL-----RGDKLIEAIERD--K--KKHLIPFFVCGTLGTTGAC  309 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-----g~m-----d~e~Le~aI~~~--~--~~g~~p~~Vv~t~GtT~tG  309 (375)
                      .|+++..+|.|+..++.+.|.+++.++.+.+     |.+     |+++|+++|++.  +  +++..|.+|+++.+ |.+|
T Consensus       247 ~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G  325 (755)
T 2vyc_A          247 VVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDG  325 (755)
T ss_dssp             EEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTS
T ss_pred             EEEECCCchHHHHHHHHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCc
Confidence            8999999999999999888889999987532     346     999999999863  2  24556667888877 6899


Q ss_pred             ccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCc--ccE------EEEcCcccCCCCCcceee
Q psy1596         310 AFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEY--ANS------IAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       310 avDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~--aDS------i~~d~HK~l~~P~~~g~l  374 (375)
                      .+.|+++|+++|+++|+++|||+||++...+.+.++.. ..+..  +|.      ++.++||++..|.++|++
T Consensus       326 ~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~-~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i  397 (755)
T 2vyc_A          326 VCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADH-YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYI  397 (755)
T ss_dssp             EEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTS-SSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEE
T ss_pred             eecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCCc-chhcCCcCCccCCCeEEEECccccccCcCCeeee
Confidence            99999999999999999999999998765555543211 11122  687      999999999998888876

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.70  E-value=7.3e-17  Score=156.20  Aligned_cols=158  Identities=11%  Similarity=-0.014  Sum_probs=122.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++|+|||+|+..++.+++.+                ..++.
T Consensus        35 ~~l~~~la~~~~~~-----------------------~v~~~~ggt~al~~~~~~~~~~----------------~~~gd   75 (375)
T 2fnu_A           35 LLFEEALCEFLGVK-----------------------HALVFNSATSALLTLYRNFSEF----------------SADRN   75 (375)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHSSCC----------------CTTSC
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHhccc----------------CCCCC
Confidence            67888899988865                       4799999999999988775310                01345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..+|.++..++...|.+++.+++++++.+|+++|+++|+++      +.+|+.+..   +|.+.|+++|.++|++
T Consensus        76 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~l~~i~~l~~~  146 (375)
T 2fnu_A           76 EIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINER------TKAIVSVDY---AGKSVEVESVQKLCKK  146 (375)
T ss_dssp             EEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTT------EEEEEEECG---GGCCCCHHHHHHHHHH
T ss_pred             EEEECCCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcC------ceEEEEeCC---cCCccCHHHHHHHHHH
Confidence            7999999999999999888889999999888899999999888643      335555544   8999999999999999


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +|+++|+|+||+.+.....  + .+.....++..++++||+++ | |+|.+
T Consensus       147 ~~~~li~D~a~~~~~~~~~--~-~~~~~~~i~~~s~s~~K~~~-~-g~g~~  192 (375)
T 2fnu_A          147 HSLSFLSDSSHALGSEYQN--K-KVGGFALASVFSFHAIKPIT-T-AEGGA  192 (375)
T ss_dssp             HTCEEEEECTTCTTCEETT--E-ETTSSSSEEEEECCTTSSSC-C-SSCEE
T ss_pred             cCCEEEEECccccCCeECC--e-eccccCCeEEEeCCCCCCcc-c-cCceE
Confidence            9999999999988754321  1 12222246788899999984 5 67754

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.70  E-value=9.1e-17  Score=156.96  Aligned_cols=174  Identities=9%  Similarity=0.052  Sum_probs=133.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+.+|.+.                   +....++|+|||+++..++.+...               
T Consensus        67 ~g~~~l~~~la~~~~~~~g~~~-------------------~~~~v~~~~g~~~a~~~~~~~~~~---------------  112 (388)
T 1j32_A           67 AGEPRLREAIAQKLQRDNGLCY-------------------GADNILVTNGGKQSIFNLMLAMIE---------------  112 (388)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEcCCHHHHHHHHHHHhcC---------------
Confidence            4567788999999999989863                   234689999999999998876532               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.+|.++..+++..|.+++.+|.++  ++.+|+++|+++|+++      +.+|+.+.+++++|.+   
T Consensus       113 ----~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~  182 (388)
T 1j32_A          113 ----PGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVYTP  182 (388)
T ss_dssp             ----TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCCH
Confidence                235788999999999999888888999999874  6789999999998642      4477778899999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +++++|+++|+++|+++++|++|+.+..-..   .+..........|.+..++||+++.| +.+|++
T Consensus       183 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~  249 (388)
T 1j32_A          183 DEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFL  249 (388)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEE
Confidence            6799999999999999999999988643110   11111000113589999999998634 236765

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.69  E-value=6.1e-16  Score=151.58  Aligned_cols=174  Identities=10%  Similarity=-0.012  Sum_probs=133.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++++.+|+++.+|.+.                   ++ ...++|+|||+++..++.+...              
T Consensus        78 ~g~~~l~~~l~~~l~~~~g~~~-------------------~~~~~i~~~~g~~~a~~~~~~~l~~--------------  124 (407)
T 3nra_A           78 RGDLGIRDLLAPRLAAFTGAPV-------------------DARDGLIITPGTQGALFLAVAATVA--------------  124 (407)
T ss_dssp             TCCHHHHHHHHHHHHHHHTSCC-------------------CTTTSEEEESHHHHHHHHHHHTTCC--------------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCcEEEeCCcHHHHHHHHHHhCC--------------
Confidence            3567788999999999999863                   22 4689999999999988765421              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec------CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES------DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC  309 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~------d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG  309 (375)
                           ++..|+++..+|.++..+++..+.+++.+|.      ++++.+|+++|+++|++.      +.+|+.+.+++++|
T Consensus       125 -----~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG  193 (407)
T 3nra_A          125 -----RGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAG  193 (407)
T ss_dssp             -----TTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTC
T ss_pred             -----CCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCC
Confidence                 3457899999999999999888899999998      478899999999999763      34777788899999


Q ss_pred             cccc---HHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         310 AFDN---LEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       310 avDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      .+-+   +++|+++|++||+++++|+||+.+..-..   .+..........+.+..++||+++.| ..+|++
T Consensus       194 ~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~  265 (407)
T 3nra_A          194 VVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVA  265 (407)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEE
T ss_pred             cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEE
Confidence            9977   99999999999999999999998543211   11111001123468888999998743 455554

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.69  E-value=1.1e-15  Score=152.34  Aligned_cols=166  Identities=14%  Similarity=-0.020  Sum_probs=126.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|....+.++.+++++++|.+                       ..+++++||++|..++.+...               
T Consensus       105 ~G~~~~~~~l~~~la~~~g~~-----------------------~~i~~~sGs~a~~~al~~l~~---------------  146 (427)
T 2w8t_A          105 NGTFHDHMEVEQALRDFYGTT-----------------------GAIVFSTGYMANLGIISTLAG---------------  146 (427)
T ss_dssp             TCCCHHHHHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHHSC---------------
T ss_pred             cCCcHHHHHHHHHHHHHhCCC-----------------------ceEEecCcHHHHHHHHHHhcC---------------
Confidence            344455588889999999876                       368899999999887765421               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                          ++..|+++...|.++..++++.+.+++.+|.     +|+++|+++|++...  ..+.+|+.+...+++|.+.|+++
T Consensus       147 ----~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~  215 (427)
T 2w8t_A          147 ----KGEYVILDADSHASIYDGCQQGNAEIVRFRH-----NSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKE  215 (427)
T ss_dssp             ----TTCEEEEETTCCHHHHHHHHHSCSEEEEECT-----TCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHH
T ss_pred             ----CCCEEEECCcccHHHHHHHHHcCCeeEEeCC-----CCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHH
Confidence                3457899999999999999888888888873     699999999976321  13567888888899999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhh--hcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAGV-EYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gi-e~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++|++||+++++|+||+++.+- +..+..  ..++ ..+|.+..++||+++ +.| |++
T Consensus       216 l~~l~~~~g~~li~Dea~~~~~~~-~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~g-G~v  273 (427)
T 2w8t_A          216 MVAVAKKHGAMVLVDEAHSMGFFG-PNGRGVYEAQGLEGQIDFVVGTFSKSVG-TVG-GFV  273 (427)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTSS-TTSCCHHHHTTCTTCCSEEEEESSSTTC-SCC-EEE
T ss_pred             HHHHHHHcCCEEEEECCccccccC-CCCCchHhhcCCCcCCcEEEecchhhhc-cCC-CEE
Confidence            999999999999999999987542 111111  1233 357999999999987 334 554

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.68  E-value=2.1e-16  Score=153.50  Aligned_cols=163  Identities=13%  Similarity=0.073  Sum_probs=130.1

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+.+++++|.+.                     ...++|+|||+++..++.+.+.                  .+
T Consensus        60 ~~~~l~~~la~~~g~~~---------------------~~v~~~~g~t~a~~~~~~~~~~------------------~~  100 (390)
T 1elu_A           60 LIAQLRQALAETFNVDP---------------------NTITITDNVTTGCDIVLWGLDW------------------HQ  100 (390)
T ss_dssp             HHHHHHHHHHHHTTSCG---------------------GGEEEESSHHHHHHHHHHHSCC------------------CT
T ss_pred             HHHHHHHHHHHHcCCCH---------------------HHEEEeCChHHHHHHHHhCCCC------------------CC
Confidence            33788899999998761                     3589999999999988876521                  12


Q ss_pred             ceEEEecCCCchHHHHH----HHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHH
Q psy1596         242 RLVAYCSDQAHSSVEKA----GLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLE  315 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~  315 (375)
                      +..|+++..+|.+...+    +...|.+++.+|.+  +++.+|+++|+++|+++      +.+|+.+.+++++|.+.|++
T Consensus       101 gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~  174 (390)
T 1elu_A          101 GDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLA  174 (390)
T ss_dssp             TCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHH
T ss_pred             CCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHH
Confidence            45788999999997765    34567899999986  67889999999988642      45788899999999999999


Q ss_pred             HHHHHHH----hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         316 ELGPICE----KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       316 eI~~ia~----~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|.++|+    ++|+++++|+||+.+.....     +.. ..+|.++.++|||++.|.++|+++
T Consensus       175 ~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~G~~~  232 (390)
T 1elu_A          175 EIMAVCRRHQGNYPVRVLVDGAQSAGSLPLD-----FSR-LEVDYYAFTGHKWFAGPAGVGGLY  232 (390)
T ss_dssp             HHHHHHHHCCSSSCCEEEEECTTTBTTBCCC-----TTT-SCCSEEEEESSSTTCCCTTCEEEE
T ss_pred             HHHHHHhhhhhhcCcEEEEEcccccCCcCCC-----hhh-cCCCEEEccccccccCCCceEEEE
Confidence            9999999    99999999999987643211     111 146999999999999999998763

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.68  E-value=1.2e-15  Score=148.92  Aligned_cols=169  Identities=9%  Similarity=-0.065  Sum_probs=130.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|......++.+++++++|.+                       ..+++++||+++..++.+...               
T Consensus        84 ~g~~~~~~~l~~~la~~~~~~-----------------------~~i~~~sGt~a~~~~l~~~~~---------------  125 (399)
T 3tqx_A           84 CGTQTIHKELEKDISEFLGTD-----------------------DTILYSSCFDANGGLFETLLG---------------  125 (399)
T ss_dssp             CCCBHHHHHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHTTHHHHCC---------------
T ss_pred             ccCchHHHHHHHHHHHHHCCC-----------------------cEEEECchHHHHHHHHHHhcC---------------
Confidence            455555688999999999876                       257888899999887755421               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                          ++..|+++..+|.++..++.+.+.+++.+|.     +|+++|+++|++....+..+.+|+.+.+++++|.+.|+++
T Consensus       126 ----~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~  196 (399)
T 3tqx_A          126 ----PEDAIISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKS  196 (399)
T ss_dssp             ----TTCEEEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHH
T ss_pred             ----CCCEEEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHH
Confidence                3458999999999999999988889998886     5788999999876554445778999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhh--hhhcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFR--KWLAGV-EYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~--~~~~gi-e~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |.++|+++|+++|+|++|+.+.. .+..+  ....++ ...|.++.++||+++.+.+ |++
T Consensus       197 i~~l~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~  255 (399)
T 3tqx_A          197 ICDLADKYNALVMVDDSHAVGFI-GENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYT  255 (399)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTS-STTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEE
T ss_pred             HHHHHHHcCCEEEEECCcccccc-CCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEE
Confidence            99999999999999999975432 11100  111232 4579999999999984544 554

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.68  E-value=4e-16  Score=151.81  Aligned_cols=173  Identities=10%  Similarity=0.027  Sum_probs=132.1

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..++++++.+|+++.+|++.                   +....++|+|||+++..++.+...                 
T Consensus        64 ~~~l~~~la~~l~~~~g~~~-------------------~~~~i~~~~g~~~a~~~~~~~l~~-----------------  107 (391)
T 3dzz_A           64 PAEYYKAVADWEEIEHRARP-------------------KEDWCVFASGVVPAISAMVRQFTS-----------------  107 (391)
T ss_dssp             CHHHHHHHHHHHHHHHSCCC-------------------CGGGEEEESCHHHHHHHHHHHHSC-----------------
T ss_pred             CHHHHHHHHHHHHHHhCCCC-------------------CHHHEEECCCHHHHHHHHHHHhCC-----------------
Confidence            35677899999999999763                   335689999999999988876522                 


Q ss_pred             hcCceEEEecCCCchHHHHHHHHcCCeEEEEecC---CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD---DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d---~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                        ++..|+++..+|.++..++...+.+++.+|.+   .++.+|+++|+++|++.     .+.+|+++.+++++|.+   +
T Consensus       108 --~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~~~~~~  180 (391)
T 3dzz_A          108 --PGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGYAWSEE  180 (391)
T ss_dssp             --TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTBCCCHH
T ss_pred             --CCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCcccCHH
Confidence              34579999999999999998888899999984   33459999999999632     24577788899999999   8


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc-CCCccc--EEEEcCcccCC-CCCcceee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA-GVEYAN--SIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~-gie~aD--Si~~d~HK~l~-~P~~~g~l  374 (375)
                      ++++|+++|++||+++|+|++|+.+............ +.+..|  .++.++||+++ ....+|++
T Consensus       181 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~  246 (391)
T 3dzz_A          181 EVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACA  246 (391)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEE
T ss_pred             HHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEE
Confidence            9999999999999999999999876432111111111 112256  88999999986 44556654

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.67  E-value=4.5e-17  Score=164.55  Aligned_cols=158  Identities=14%  Similarity=-0.021  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++ +|.+                      ...++|+|||+||..++.++..                   ++.
T Consensus        60 ~~~~~~la~-~g~~----------------------~~v~~~~G~t~a~~~~~~a~~~-------------------~gd   97 (446)
T 2x3l_A           60 LKSMKQVEK-HSDY----------------------DGYFLVNGTTSGILSVIQSFSQ-------------------KKG   97 (446)
T ss_dssp             HHHHHHHCS-CTTE----------------------EEEEESSHHHHHHHHHHHTTTT-------------------SSS
T ss_pred             HHHHHHHHh-cCCC----------------------ceEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence            788999999 8875                      2468899999999999877632                   345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEec--CCC----CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIES--DDK----LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~----g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      .|+++..+|.|+..++.+.|.+++.++.  +++    +.+|+++|   +..+      +.+|+++. .|.+|.+.|+++|
T Consensus        98 ~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I  167 (446)
T 2x3l_A           98 DILMARNVHKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEV  167 (446)
T ss_dssp             CEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHH
T ss_pred             EEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHH
Confidence            7999999999999999888888999988  665    67899888   2222      44777777 5669999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|+|+|+|+||++...+.+. ....... .+|.++.++||+++.+.++|+++
T Consensus       168 ~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~-g~Di~~~S~~K~l~~~~g~g~l~  223 (446)
T 2x3l_A          168 IKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNY-QADYVVQSFHKTLPALTMGSVLY  223 (446)
T ss_dssp             HHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGG-TCSEEEECHHHHSSSCTTCEEEE
T ss_pred             HHHHHhcCCeEEEcchhhhhhccCCC-CCChHHc-CCCEEEECCccccccccccEEEE
Confidence            99999999999999999983323221 0001111 36999999999999999999863

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.66  E-value=1.5e-16  Score=155.05  Aligned_cols=156  Identities=17%  Similarity=0.060  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       .+++|+|||+|+..++.+++.                  .++.
T Consensus        39 ~~l~~~la~~~~~~-----------------------~~i~~~sgt~al~~~l~~l~~------------------~~gd   77 (373)
T 3frk_A           39 KKFEQEFADYCNVN-----------------------YCIGCGNGLDALHLILKGYDI------------------GFGD   77 (373)
T ss_dssp             HHHHHHHHHHHTSS-----------------------EEEEESCHHHHHHHHHHHTTC------------------CTTC
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHcCC------------------CCcC
Confidence            67788888888865                       479999999999988876521                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..+++..|.+++.++++ +++.+|+++|+++|+++      +.+|+   .++++|.+.|+++|.++|+
T Consensus        78 ~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~~~l~~i~~l~~  148 (373)
T 3frk_A           78 EVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEK------TKAII---AVHLYGQPADMDEIKRIAK  148 (373)
T ss_dssp             EEEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTT------EEEEE---EECCTTCCCCHHHHHHHHH
T ss_pred             EEEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCC------CeEEE---EECCCcCcccHHHHHHHHH
Confidence            79999999999999998888899999987 67899999999988653      33555   4578999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEc--CcccCCCCCcceee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFN--PSKWLMVHFDCTAM  374 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d--~HK~l~~P~~~g~l  374 (375)
                      ++|+++|+|+||+.+..+...  .  .+ ..+|.++++  +||+++.+...|++
T Consensus       149 ~~~~~li~D~a~~~g~~~~~~--~--~~-~~~d~~~~S~~~~K~l~~~g~gg~~  197 (373)
T 3frk_A          149 KYNLKLIEDAAQAHGSLYKGM--K--VG-SLGDAAGFSFYPAKNLGSLGDGGAV  197 (373)
T ss_dssp             HHTCEEEEECTTCTTCEETTE--E--TT-SSSSEEEEECCTTSSSCCSSSCEEE
T ss_pred             HcCCEEEEECCcccCCEECCE--e--cc-ccccEEEEeCcCCCccCccceeEEE
Confidence            999999999999987653221  1  12 124777777  77998763345543

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.66  E-value=5.9e-16  Score=151.20  Aligned_cols=173  Identities=15%  Similarity=0.069  Sum_probs=132.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCc-EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNF-ITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~-GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++.+.+|+.+.+|.+.                   +... .++|+|||+++..++.+...              
T Consensus        63 ~g~~~l~~~la~~~~~~~g~~~-------------------~~~~~v~~~~g~~~a~~~~~~~~~~--------------  109 (389)
T 1gd9_A           63 IGLLELREAIAEKLKKQNGIEA-------------------DPKTEIMVLLGANQAFLMGLSAFLK--------------  109 (389)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCC-------------------CTTTSEEEESSTTHHHHHHHTTTCC--------------
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CCCCeEEEcCChHHHHHHHHHHhCC--------------
Confidence            3567788899999998889753                   3346 89999999999988765421              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc-
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD-  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD-  312 (375)
                           ++..|++++.+|.++..+++..|.+++.+|.++  ++.+|+++|+++++++      +.+|+.+.+++++|.+- 
T Consensus       110 -----~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~  178 (389)
T 1gd9_A          110 -----DGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGAVLT  178 (389)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCC
T ss_pred             -----CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCCC
Confidence                 245789999999999999888788999999874  5689999999998642      44677788899999884 


Q ss_pred             --cHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         313 --NLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       313 --pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                        ++++|+++|++||+++++|++|+.+..-..   .+.. +.+....|.+..++||+++.| +.+|++
T Consensus       179 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~  245 (389)
T 1gd9_A          179 KKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIAS-LDGMFERTITVNGFSKTFAMTGWRLGFV  245 (389)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGG-STTCGGGEEEEEESTTTTTCGGGCCEEE
T ss_pred             HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhh-ccCCCCCEEEEecChhhcCCcccceEEE
Confidence              699999999999999999999998754211   1111 123345789999999998644 335654

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.66  E-value=1.7e-15  Score=148.59  Aligned_cols=166  Identities=14%  Similarity=0.003  Sum_probs=129.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+.+++.+++++++|.+                       ..++|+|||+|+..++.++..               
T Consensus        84 ~g~~~~~~~l~~~la~~~g~~-----------------------~v~~~~ggt~a~~~~~~~~~~---------------  125 (398)
T 3a2b_A           84 NGTLDIHVELEEKLSAYVGKE-----------------------AAILFSTGFQSNLGPLSCLMG---------------  125 (398)
T ss_dssp             TCCCHHHHHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHSSC---------------
T ss_pred             cCCcHHHHHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC---------------
Confidence            455667789999999998865                       479999999999998876532               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                          ++..|++++.+|.++..++...|.+++.+|.     +|+++|++++++... + .+.+|+.+..++++|.+.|+++
T Consensus       126 ----~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~-~-~~~~v~~~~~~nptG~~~~~~~  194 (398)
T 3a2b_A          126 ----RNDYILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPE-D-SAKLICTDGIFSMEGDIVNLPE  194 (398)
T ss_dssp             ----TTCEEEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCS-S-SCEEEEEESBCTTTCCBCCHHH
T ss_pred             ----CCCEEEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhcc-C-CceEEEEeCCCCCCCCccCHHH
Confidence                3457999999999999999888889999886     689999999976321 1 2557888888899999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCccc-c-hhhhhhhcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFI-C-PEFRKWLAGV-EYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~-~-~~~~~~~~gi-e~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |.++|+++|+++++|++|+.+..- . ..... ..++ +++|.++.++||+++ |.| |++
T Consensus       195 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~~~di~~~s~sK~~~-~~G-G~~  252 (398)
T 3a2b_A          195 LTSIANEFDAAVMVDDAHSLGVIGHKGAGTAS-HFGLNDDVDLIMGTFSKSLA-SLG-GFV  252 (398)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTSSGGGCCHHH-HHTCGGGCSEEEEESSSTTC-SSC-EEE
T ss_pred             HHHHHHHcCcEEEEECCCcccccCCCCCchHh-hcCCCcCCeEEEeccccccc-CCC-cEE
Confidence            999999999999999999866421 0 11111 1133 246999999999987 656 654

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.65  E-value=1.4e-15  Score=149.44  Aligned_cols=173  Identities=8%  Similarity=-0.020  Sum_probs=133.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .+..++++++.+|+.+.+|.+.                   ++...++|+|||+++..++.+...               
T Consensus        78 ~g~~~lr~~la~~~~~~~g~~~-------------------~~~~v~~~~g~t~al~~~~~~l~~---------------  123 (389)
T 1o4s_A           78 RGIYELREGIAKRIGERYKKDI-------------------SPDQVVVTNGAKQALFNAFMALLD---------------  123 (389)
T ss_dssp             TCCHHHHHHHHHHHHHHHTCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CHHHEEEecCHHHHHHHHHHHhCC---------------
Confidence            4567788899999988888763                   234689999999999988876521               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.+|.++..+++..|.+++.+|.++  ++.+|+++|+++|++.      +.+|+.+.+++++|.+   
T Consensus       124 ----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~  193 (389)
T 1o4s_A          124 ----PGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVVYRR  193 (389)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCCCCH
Confidence                245788999999999999888888999999874  5789999999988642      4467778889999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +++++|+++|+++|+++++|++|+.+..-.  +.... +.+....|.++.++||+++.| +.+|++
T Consensus       194 ~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~l  258 (389)
T 1o4s_A          194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMTGWRVGYL  258 (389)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCGGGCCEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCcccceEEE
Confidence            459999999999999999999999865311  11222 222235699999999998633 236665

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.65  E-value=1.3e-15  Score=148.99  Aligned_cols=157  Identities=12%  Similarity=0.059  Sum_probs=121.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++||+|+..++.+.+-                  .++.
T Consensus        41 ~~l~~~la~~~~~~-----------------------~~i~~~sGt~al~~~l~~l~~------------------~~gd   79 (388)
T 1b9h_A           41 NSFEREFAAHHGAA-----------------------HALAVTNGTHALELALQVMGV------------------GPGT   79 (388)
T ss_dssp             HHHHHHHHHHTTCS-----------------------EEEEESCHHHHHHHHHHHTTC------------------CTTC
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHcCC------------------CCcC
Confidence            67778888888865                       247777789999988876521                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..++...|.+++.+++++ ++.+|+++|+++|+++      +.+|+   +++.+|.+.++++|+++|+
T Consensus        80 ~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~la~  150 (388)
T 1b9h_A           80 EVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPR------TKVIM---PVHMAGLMADMDALAKISA  150 (388)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHH
T ss_pred             EEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcC------ceEEE---EeCCccCcCCHHHHHHHHH
Confidence            789999999999999988888999999976 4899999999998642      33444   7788999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++|+++|+|+||+.+......  . +..+..++..+++.||++..+. .|++
T Consensus       151 ~~~~~li~D~a~~~g~~~~~~--~-~~~~~~i~~~S~s~~K~l~g~~-~G~~  198 (388)
T 1b9h_A          151 DTGVPLLQDAAHAHGARWQGK--R-VGELDSIATFSFQNGKLMTAGE-GGAV  198 (388)
T ss_dssp             HHTCCBCEECTTCTTCEETTE--E-GGGSSSCEEEECCTTSSSCSSS-CEEE
T ss_pred             HcCCEEEEecchhcCCccCCe--e-cccccceEEEEccCCCcccCCC-eEEE
Confidence            999999999999976543211  1 1112246899999999987654 4554

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.65  E-value=6.9e-16  Score=149.72  Aligned_cols=156  Identities=13%  Similarity=0.069  Sum_probs=123.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       .+++|+|||+|+..++.+++.                  .++.
T Consensus        41 ~~l~~~la~~~~~~-----------------------~~~~~~~gt~a~~~~~~~~~~------------------~~gd   79 (374)
T 3uwc_A           41 EKFEKRFAALHNAP-----------------------HAIGVGTGTDALAMSFKMLNI------------------GAGD   79 (374)
T ss_dssp             HHHHHHHHHHTTCS-----------------------EEEEESCHHHHHHHHHHHTTC------------------CTTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHcCC------------------CCCC
Confidence            67788888888765                       479999999999888776521                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..+|.++..+++..|.+++.++.++++.+|+++|+++++++      +.+|+   .++++|.+.|+++|+++|++
T Consensus        80 ~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~---~~n~~G~~~~~~~i~~~~~~  150 (374)
T 3uwc_A           80 EVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITDK------TKAIM---PVHYTGNIADMPALAKIAKK  150 (374)
T ss_dssp             EEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHH
T ss_pred             EEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCC------ceEEE---EeCCcCCcCCHHHHHHHHHH
Confidence            7899999999999999888899999999888999999999988653      33444   67899999999999999999


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccCCCCCcceee
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWLMVHFDCTAM  374 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l~~P~~~g~l  374 (375)
                      +|+++|+|+||+.+..+...  .  .+ ..+|.+++++|  |+++.+-.+|++
T Consensus       151 ~~~~li~D~~~~~g~~~~~~--~--~~-~~~d~~~~s~~~~K~l~~~g~~g~~  198 (374)
T 3uwc_A          151 HNLHIVEDACQTILGRINDK--F--VG-SWGQFACFSLHPLKNLNVWSDAGVI  198 (374)
T ss_dssp             TTCEEEEECTTCTTCEETTE--E--TT-SSSSEEEEECSSSSSSCCSSCCEEE
T ss_pred             cCCEEEEeCCCccCceeCCe--e--cc-ccccEEEEeCCCCCcCCccceeEEE
Confidence            99999999999987553221  1  11 13599999988  998763335543

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.64  E-value=8.2e-16  Score=150.73  Aligned_cols=156  Identities=8%  Similarity=-0.032  Sum_probs=121.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       .+++|+|||+|+..++.+++-                  .++.
T Consensus        59 ~~l~~~la~~~~~~-----------------------~~i~~~~gt~al~~~l~~~~~------------------~~gd   97 (391)
T 3dr4_A           59 VEFEKAFADYCGVK-----------------------HAIACNNGTTALHLALVAMGI------------------GPGD   97 (391)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHTC------------------CTTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHcCC------------------CCcC
Confidence            67778888888765                       479999999999988876521                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..++...|.+++.++++ +++.+|+++|+++++++      +.+|+   .++++|.+.|+++|+++|+
T Consensus        98 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~---~~n~tG~~~~~~~i~~l~~  168 (391)
T 3dr4_A           98 EVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPR------TKAIM---PVHLYGQICDMDPILEVAR  168 (391)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHH
T ss_pred             EEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCC------ceEEE---EECCCCChhhHHHHHHHHH
Confidence            79999999999999998888999999998 67899999999988643      33444   3578999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      ++|+++++|+||+.+....+..   ...+..++.+++++||++..+. .|+
T Consensus       169 ~~~~~li~D~a~~~g~~~~~~~---~~~~~di~~~S~s~~K~l~~g~-gg~  215 (391)
T 3dr4_A          169 RHNLLVIEDAAEAVGATYRGKK---SGSLGDCATFSFFGNAIITTGE-GGM  215 (391)
T ss_dssp             HTTCEEEEECTTCTTCEETTEE---TTSSSSEEEEECBTTSSSCCBS-CEE
T ss_pred             HcCCEEEEECcccccceECCee---ecccCCEEEEECCCCCcCCcCC-eEE
Confidence            9999999999999765543221   1122246777777999997644 444

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.64  E-value=3.1e-15  Score=147.71  Aligned_cols=154  Identities=10%  Similarity=0.057  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.+++++++|.+                       ..+++++||+|+..++.+...                   
T Consensus        64 ~~~~~l~~~la~~~g~~-----------------------~~i~~~sG~~a~~~~l~~~~~-------------------  101 (398)
T 2rfv_A           64 PTTDALEKKLAVLERGE-----------------------AGLATASGISAITTTLLTLCQ-------------------  101 (398)
T ss_dssp             HHHHHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------
T ss_pred             hHHHHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------
Confidence            33478899999999865                       368889999999988876532                   


Q ss_pred             CceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      ++..|++++.+|.++..++    ...|.+++.+|.+     |+++|+++|+++      +.+|+++.+++++|.+.|+++
T Consensus       102 ~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~  170 (398)
T 2rfv_A          102 QGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIET  170 (398)
T ss_dssp             TTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHH
T ss_pred             CCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHH
Confidence            2457899999999998876    5678889999875     899999988643      458888999999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      |+++|+++|+++|+|++|+.+....+.  .  .   .+|.++.++||+++.|.+  +|++
T Consensus       171 i~~l~~~~~~~li~De~~~~~~~~~~~--~--~---~~di~~~s~sK~~~~~g~~~~G~~  223 (398)
T 2rfv_A          171 VAGIAHQQGALLVVDNTFMSPYCQQPL--Q--L---GADIVVHSVTKYINGHGDVIGGII  223 (398)
T ss_dssp             HHHHHHHTTCEEEEECTTTCTTTCCGG--G--G---TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred             HHHHHHHcCCEEEEECCCcccccCCch--h--h---CCcEEEEeCcccccCCCCceEEEE
Confidence            999999999999999999977543221  1  1   369999999999988876  5765

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.64  E-value=2.7e-15  Score=147.85  Aligned_cols=161  Identities=16%  Similarity=0.078  Sum_probs=125.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++|+|||+|+..++.+.+.                  .++.
T Consensus        35 ~~l~~~la~~~~~~-----------------------~v~~~~ggt~al~~~~~~l~~------------------~~gd   73 (394)
T 1o69_A           35 NRFEQSVKDYSKSE-----------------------NALALNSATAALHLALRVAGV------------------KQDD   73 (394)
T ss_dssp             HHHHHHHHHHHCCS-----------------------EEEEESCHHHHHHHHHHHTTC------------------CTTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHcCC------------------CCCC
Confidence            67778888888765                       479999999999998876521                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..+|.++..++...|.+++.+|+++++.+|+++|+++|++..   ..+.+|+++.   ++|..+++++|.++|++
T Consensus        74 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~  147 (394)
T 1o69_A           74 IVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKE  147 (394)
T ss_dssp             EEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHH
T ss_pred             EEEECCCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHH
Confidence            79999999999999998888899999998889999999999997621   0133555553   78999999999999999


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|+++++|+||+.+..+...  . ...+..+|.++++.||.+. |.++|+++
T Consensus       148 ~~~~li~Dea~~~g~~~~~~--~-~~~~~~~~~~s~s~~K~l~-~~~~G~~~  195 (394)
T 1o69_A          148 NDIVLIEDAAEALGSFYKNK--A-LGTFGEFGVYSYNGNKIIT-TSGGGMLI  195 (394)
T ss_dssp             TTCEEEEECTTCTTCEETTE--E-TTSSSSEEEEECCTTSSSC-CSSCEEEE
T ss_pred             cCCEEEEECcCcccceeCCc--c-cccccCcEEEEEeCCccCC-CCCceEEE
Confidence            99999999999954433211  1 1112357999999999765 77888763

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.63  E-value=1.1e-15  Score=151.43  Aligned_cols=163  Identities=12%  Similarity=0.109  Sum_probs=125.1

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |...+.+++.+++++++|.+                       ..+++++||+|+..++.+.+-                
T Consensus        39 g~~~l~~~l~~~la~~~g~~-----------------------~~i~~~~gt~al~~~~~~~~~----------------   79 (418)
T 2c81_A           39 GEESMERKFAKAFADFNGVP-----------------------YCVPTTSGSTALMLALEALGI----------------   79 (418)
T ss_dssp             SSCCHHHHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHTTC----------------
T ss_pred             CCHHHHHHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHcCC----------------
Confidence            33444578889999999876                       368999999999988876521                


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                        .++..|+++..+|.++..++...|.+++.+++++ ++.+|+++|+++|+++      +.+|+.   ++.+|.+.++++
T Consensus        80 --~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~---~~~~G~~~~~~~  148 (418)
T 2c81_A           80 --GEGDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDK------TKAIIP---VHLFGSMANMDE  148 (418)
T ss_dssp             --CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTT------EEEECC---BCCTTCCCCHHH
T ss_pred             --CCcCEEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCC------CeEEEE---eCCcCCcccHHH
Confidence              1345789999999999999988888999999975 7899999999988643      334544   357899999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |.++|+++|+++|+|+||+.+..+..  +. +..+..++.+++++||+++.. .+|++
T Consensus       149 i~~~~~~~~~~li~D~a~~~~~~~~~--~~-~~~~~~~~~~s~s~~K~~~~g-~~g~~  202 (418)
T 2c81_A          149 INEIAQEHNLFVIEDCAQSHGSVWNN--QR-AGTIGDIGAFSCQQGKVLTAG-EGGII  202 (418)
T ss_dssp             HHHHHHHTTCEEEEECTTCTTCEETT--EE-TTSSSSEEEEECCTTSSSCSS-SCEEE
T ss_pred             HHHHHHHCCCEEEEECcccccCccCC--Ee-cccccceEEEeccCCcccCCC-CeEEE
Confidence            99999999999999999998863221  11 112234677788889998763 55543

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.63  E-value=3.8e-15  Score=146.52  Aligned_cols=163  Identities=15%  Similarity=0.087  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.+++++++|.+.                     ...+||+|||+++..++.+++...... +   +        
T Consensus        71 ~~~~~l~~~la~~~g~~~---------------------~~v~~~~g~t~al~~al~~~~~~~~~~-~---~--------  117 (416)
T 1qz9_A           71 DLSERLGNRLATLIGARD---------------------GEVVVTDTTSINLFKVLSAALRVQATR-S---P--------  117 (416)
T ss_dssp             GHHHHHHHHHHTTTTCCT---------------------TSEEECSCHHHHHHHHHHHHHHHHHHH-S---T--------
T ss_pred             HHHHHHHHHHHHHcCCCc---------------------ccEEEeCChhHHHHHHHHhhccccccc-C---C--------
Confidence            444789999999999861                     357899999999877877765311000 0   0        


Q ss_pred             CceEEEecCCCchHHHHHHH----Hc--CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGL----IG--LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~----lg--~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                      .+.+|+++...|.++..++.    ..  |.+++.||.       +++|+++|+++      +.+|+.+.+++++|.+.|+
T Consensus       118 gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l  184 (416)
T 1qz9_A          118 ERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAIDQD------TAVVMLTHVNYKTGYMHDM  184 (416)
T ss_dssp             TCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCSTT------EEEEEEESBCTTTCBBCCH
T ss_pred             CCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhCCC------ceEEEEeccccCcccccCH
Confidence            12367888899998877642    23  778888876       67888887532      5688999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc-eeeC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC-TAMW  375 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~-g~l~  375 (375)
                      ++|.++|+++|+|+|+|+||+.+....+ ....     .+|.+++++||+++.+.++ |+++
T Consensus       185 ~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~-----~~d~~~~s~~K~l~~g~~~~g~l~  240 (416)
T 1qz9_A          185 QALTALSHECGALAIWDLAHSAGAVPVD-LHQA-----GADYAIGCTYKYLNGGPGSQAFVW  240 (416)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSCCC-HHHH-----TCSEEEECSSSTTCCCTTCCCEEE
T ss_pred             HHHHHHHHHcCCEEEEEccccccCcCCC-hhhc-----CCCEEEecCcccCCCCCCCeEEEE
Confidence            9999999999999999999987644221 2211     2699999999998877887 8763

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.63  E-value=6.1e-15  Score=144.85  Aligned_cols=177  Identities=17%  Similarity=0.020  Sum_probs=129.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .+..++++.+.+|+.+.+|++.                   +....++|+|||+|+..++.+++.               
T Consensus        75 ~~~~~l~~~la~~~~~~~g~~~-------------------~~~~v~~t~g~t~a~~~~~~~~~~---------------  120 (407)
T 2zc0_A           75 NGIPELREELAAFLKKYDHLEV-------------------SPENIVITIGGTGALDLLGRVLID---------------  120 (407)
T ss_dssp             TCCHHHHHHHHHHHHHHSCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHHHHHhcCCCC-------------------CcceEEEecCHHHHHHHHHHHhcC---------------
Confidence            3566777888888888889753                   234689999999999998877632               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEE-EEEcCCCCccccccHH
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFV-CGTLGTTGACAFDNLE  315 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~V-v~t~GtT~tGavDpl~  315 (375)
                          ++..|+++..+|.++..++...|.+++.+|.++++ +|+++|+++|++....+..+.+| +...+++++|.+.|++
T Consensus       121 ----~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~  195 (407)
T 2zc0_A          121 ----PGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSME  195 (407)
T ss_dssp             ----TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHH
T ss_pred             ----CCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHH
Confidence                23478899999999999888888899999987766 99999999998432222224454 4567789999997776


Q ss_pred             ---HHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         316 ---ELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       316 ---eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                         +|+++|++||+++|+|++|+.+..-..   .+...  +....+.+..++||+++..+.+|++
T Consensus       196 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~G~r~G~~  258 (407)
T 2zc0_A          196 RRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKAL--DNEGRVIVAGTLSKVLGTGFRIGWI  258 (407)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGG--CSSCCEEEEEESTTTTCTTSCCEEE
T ss_pred             HHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhc--CCCCCEEEEcccccccCCCcceEEE
Confidence               999999999999999999998643111   11111  1112245677889999833346765

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.62  E-value=9.7e-16  Score=151.49  Aligned_cols=172  Identities=15%  Similarity=0.083  Sum_probs=131.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .+..++++++.+|+.+.+|++.                   +....++|+|||+|+..++.+...               
T Consensus        79 ~g~~~l~~~la~~~~~~~g~~~-------------------~~~~v~~~~g~t~a~~~~~~~~~~---------------  124 (409)
T 2gb3_A           79 AGIWELREAFASYYKRRQRVDV-------------------KPENVLVTNGGSEAILFSFAVIAN---------------  124 (409)
T ss_dssp             TCCHHHHHHHHHHHHHTSCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CHHHEEEeCCHHHHHHHHHHHhCC---------------
Confidence            4567788899999998888763                   335689999999999998876521               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.+|.++..++...|.+++.+|.++  ++.+ +++|+++|++.      +.+|+.+.+++++|.+   
T Consensus       125 ----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~  193 (409)
T 2gb3_A          125 ----PGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNPTGVVYGK  193 (409)
T ss_dssp             ----TTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCCCCCCcCH
Confidence                245789999999999999888888999999874  4455 88888887542      4577778889999987   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +++++|+++|+++|+++++|++|+.+..-. .....+.++...|.++.++||+++.| +.+|++
T Consensus       194 ~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~  256 (409)
T 2gb3_A          194 DEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCL  256 (409)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCCccceEEEE
Confidence            579999999999999999999999864311 11111334445799999999998643 236654

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.62  E-value=5.3e-15  Score=143.33  Aligned_cols=164  Identities=10%  Similarity=0.030  Sum_probs=125.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                    +....++|+|||+++..++.+...                   ++.
T Consensus        70 ~~l~~~la~~~g~~--------------------~~~~i~~~~g~t~a~~~~~~~~~~-------------------~gd  110 (367)
T 3euc_A           70 EALRAKLKEVMQVP--------------------AGMEVLLGNGSDEIISMLALAAAR-------------------PGA  110 (367)
T ss_dssp             HHHHHHHHHHHTCC--------------------TTCEEEEEEHHHHHHHHHHHHTCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC--------------------CcceEEEcCCHHHHHHHHHHHHcC-------------------CCC
Confidence            67788899999984                    234689999999999888765421                   245


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~i  320 (375)
                      .|+++..+|.++..+++..|.+++.+|.++++.+|+++|+++|++..     +.+|+++.+++++|.+   +++++|+++
T Consensus       111 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~~  185 (367)
T 3euc_A          111 KVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQ-----PAIVYLAYPNNPTGNLFDAADMEAIVRA  185 (367)
T ss_dssp             EEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHC-----CSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             EEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHh
Confidence            78899999999999888888899999999899999999999998731     3377778899999998   678999999


Q ss_pred             HHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         321 CEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       321 a~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |++|  |+++++|++|+....-.  ....+.. ...+.+..++||++.....+|.+
T Consensus       186 ~~~~~~~~~li~De~~~~~~~~~--~~~~~~~-~~~~i~~~s~sK~~~~G~r~G~~  238 (367)
T 3euc_A          186 AQGSVCRSLVVVDEAYQPFAQES--WMSRLTD-FGNLLVMRTVSKLGLAGIRLGYV  238 (367)
T ss_dssp             TBTTSCBCEEEEECTTCCSSSCC--SGGGGGT-CTTEEEEEECCCTTSCSCCEEEE
T ss_pred             hhhcCCCcEEEEeCcchhhcccc--hHHHHhh-CCCEEEEecchhhcccccCceee
Confidence            9999  99999999998753211  1111111 12357788999995444556654

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.62  E-value=2.1e-15  Score=147.34  Aligned_cols=173  Identities=9%  Similarity=0.007  Sum_probs=131.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++++.+|+.+.+|.+.                   ++. ..++|+|||+++..++.+...              
T Consensus        67 ~g~~~l~~~la~~l~~~~g~~~-------------------~~~~~v~~~~g~~~a~~~~~~~~~~--------------  113 (386)
T 1u08_A           67 TGVQALREAIAQKTERLYGYQP-------------------DADSDITVTAGATEALYAAITALVR--------------  113 (386)
T ss_dssp             TCCHHHHHHHHHHHHHHHSCCC-------------------CTTTTEEEESSHHHHHHHHHHHHCC--------------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCCCEEEcCChHHHHHHHHHHhCC--------------
Confidence            3567788999999999889763                   334 689999999999888876521              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD--  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD--  312 (375)
                           ++..|++++.+|.++..+++..+.+++.+|.++ ++.+|+++|+++|++.      +.+|+.+.+++++|.+-  
T Consensus       114 -----~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~  182 (386)
T 1u08_A          114 -----NGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSER------TRLVILNTPHNPSATVWQQ  182 (386)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             -----CCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhccc------CEEEEEeCCCCCCCccCCH
Confidence                 235788999999999998888888999999875 5789999999998532      45777788999999885  


Q ss_pred             -cHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         313 -NLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                       ++++|+++|+++|+|+++|++|+.+..-..   .+... .+....|.++.++||+++.| +.+|++
T Consensus       183 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~~  248 (386)
T 1u08_A          183 ADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAH-PQLRERAVAVSSFGKTYHMTGWKVGYC  248 (386)
T ss_dssp             HHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGS-HHHHTTEEEEEEHHHHTTCGGGCCEEE
T ss_pred             HHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcc-cCccCcEEEEecchhhcCCcccceEEE
Confidence             589999999999999999999987532110   11111 00123589999999998733 236654

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.62  E-value=2.4e-15  Score=148.27  Aligned_cols=170  Identities=10%  Similarity=-0.025  Sum_probs=131.5

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .+..++++.+.+|+.+..|++.                   +....++|+|||+|+..++.++..               
T Consensus        78 ~g~~~l~~~la~~l~~~~g~~~-------------------~~~~v~~t~g~~~al~~~~~~l~~---------------  123 (406)
T 1xi9_A           78 EGLPELRKAIVEREKRKNGVDI-------------------TPDDVRVTAAVTEALQLIFGALLD---------------  123 (406)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCcHHHHHHHHHHHHHhcCCCC-------------------CHHHEEEcCChHHHHHHHHHHhCC---------------
Confidence            4567788999999999888873                   335689999999999988876521               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.+|.++..++...|.+++.+|.++  ++.+|+++|+++|++.      +.+|+.+.+++++|.+   
T Consensus       124 ----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~  193 (406)
T 1xi9_A          124 ----PGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALYDK  193 (406)
T ss_dssp             ----TTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCcCH
Confidence                245789999999999999988888999999863  5679999999998642      4467778889999987   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcc-cEEEEcCcccCCCC-Ccceee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYA-NSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~a-DSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +++++|+++|+++|+|+++|++|+.+.. ..   .+..+ .  ... |.++.++||+++.| +.+|++
T Consensus       194 ~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~~~~~-~--~~~~~i~~~s~sK~~~~~G~r~G~~  257 (406)
T 1xi9_A          194 KTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHISPGSL-T--KDVPVIVMNGLSKVYFATGWRLGYM  257 (406)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCCHHHH-C--SSSCEEEEEESTTTTCCGGGCCEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHc-C--CCceEEEEeccccccCCCccEEEEE
Confidence            4599999999999999999999998653 21   11221 1  234 67888999998633 236654

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.62  E-value=3e-15  Score=148.94  Aligned_cols=150  Identities=16%  Similarity=0.116  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       ..++|+|||+|+..++.++..                   ++.
T Consensus        59 ~~l~~~la~~~g~~-----------------------~~~~~~~gt~a~~~al~~l~~-------------------~gd   96 (412)
T 2cb1_A           59 KALEERLKALEGAL-----------------------EAVVLASGQAATFAALLALLR-------------------PGD   96 (412)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHTTCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            78889999998865                       479999999999998876521                   245


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++..+|.++...+.    ..+.+++.++.|      +++|+++|+++      +.+|+++.+++++|.+.|+++|++
T Consensus        97 ~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~  164 (412)
T 2cb1_A           97 EVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE------PEAVREALSAK------TRAVFVETVANPALLVPDLEALAT  164 (412)
T ss_dssp             EEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS------HHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             EEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC------HHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHH
Confidence            78899999998887753    357788888763      88999888643      457888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccC-cccchhhhhhhcCCCcccEEEEcCcccCCCCCc-ceee
Q psy1596         320 ICEKEGLWLHVDAAYAGS-SFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD-CTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~-~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~-~g~l  374 (375)
                      +|+++|+++|+|++|+.+ ....+.    ..   .+|.++.++||+++.|.+ .|.+
T Consensus       165 l~~~~~~~li~D~~~~~~~~~~~~~----~~---~~di~~~S~~K~~~~~~~~~G~~  214 (412)
T 2cb1_A          165 LAEEAGVALVVDNTFGAAGALCRPL----AW---GAHVVVESLTKWASGHGSVLGGA  214 (412)
T ss_dssp             HHHHHTCEEEEECGGGTTTTSCCGG----GG---TCSEEEEETTTTTTCSSCCCCEE
T ss_pred             HHHHcCCEEEEECCCccccccCCcc----cc---CCeEEEECCcccccCCCCcEEEE
Confidence            999999999999999987 322221    11   369999999999998876 5543

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.62  E-value=1.5e-15  Score=148.04  Aligned_cols=156  Identities=13%  Similarity=0.038  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       .+++|+|||+|+..++.+++-                  .++.
T Consensus        38 ~~l~~~la~~~~~~-----------------------~~~~~~sGt~al~~al~~~~~------------------~~gd   76 (367)
T 3nyt_A           38 TELEDRLADFVGAK-----------------------YCISCANGTDALQIVQMALGV------------------GPGD   76 (367)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHTTC------------------CTTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHhCC------------------CCcC
Confidence            67778888888865                       479999999999998876531                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..++...|.+++.++++++ +.+|+++|+++|+++      +.+|+   .++.+|...++++|.++|+
T Consensus        77 ~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~~~~G~~~~~~~i~~la~  147 (367)
T 3nyt_A           77 EVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPR------TKAII---PVSLYGQCADFDAINAIAS  147 (367)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHH
T ss_pred             EEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcC------CcEEE---eeCCccChhhHHHHHHHHH
Confidence            7999999999999999888899999999865 899999999998543      33444   6678999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEc--CcccCCCCCcceee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFN--PSKWLMVHFDCTAM  374 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d--~HK~l~~P~~~g~l  374 (375)
                      ++|+++|+|+||+.+......  .  .+. ..|.++++  +||+++.+-..|++
T Consensus       148 ~~~~~li~D~a~~~g~~~~~~--~--~~~-~~di~~~Sf~~~K~l~~~g~gg~~  196 (367)
T 3nyt_A          148 KYGIPVIEDAAQSFGASYKGK--R--SCN-LSTVACTSFFPSAPLGCYGDGGAI  196 (367)
T ss_dssp             HTTCCBEEECTTTTTCEETTE--E--TTS-SSSEEEEECCTTSSSCCSSCCEEE
T ss_pred             HcCCEEEEECccccCCeECCe--e--ccC-CCCEEEEECCCCCcCCCcCceeEE
Confidence            999999999999876543221  1  111 12777777  69998763335543

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.62  E-value=1.3e-15  Score=150.52  Aligned_cols=173  Identities=10%  Similarity=0.012  Sum_probs=132.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++++.+|+.+.+|.+.                   +.. ..++|+|||+++..++.+...              
T Consensus        62 ~g~~~l~~~la~~~~~~~g~~~-------------------~~~~~v~~t~g~~~al~~~~~~~~~--------------  108 (411)
T 2o0r_A           62 PGSAPLRRAIAAQRRRHFGVDY-------------------DPETEVLVTVGATEAIAAAVLGLVE--------------  108 (411)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCC-------------------CTTTSEEEEEHHHHHHHHHHHHHCC--------------
T ss_pred             CCCHHHHHHHHHHHHHHcCCCC-------------------CCCceEEEeCCHHHHHHHHHHHhcC--------------
Confidence            3567788999999999989763                   233 689999999999988876532              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC---CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD---KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~---~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-  311 (375)
                           ++..|++++.+|.++..++...|.+++.+|.++   ++.+|+++|+++|++.      +.+|+.+.+++++|.+ 
T Consensus       109 -----~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~~~  177 (411)
T 2o0r_A          109 -----PGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGAVL  177 (411)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred             -----CCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCCCC
Confidence                 245789999999999998888888999999864   4679999999998632      4577778899999998 


Q ss_pred             --ccHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         312 --DNLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                        +++++|+++|+++|+++++|++|+.+..-.   +.+.. +.+....|.++.++||+++.| +.+|++
T Consensus       178 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~  245 (411)
T 2o0r_A          178 SATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAG-FDGMAERTITISSAAKMFNCTGWKIGWA  245 (411)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGG-STTTGGGEEEEEEHHHHTTCTTTCEEEE
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhh-ccCCCCCEEEEeechhhcCCccceEEEE
Confidence              457999999999999999999998764311   01111 111235699999999988633 236665

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.62  E-value=9.6e-15  Score=143.19  Aligned_cols=166  Identities=8%  Similarity=-0.088  Sum_probs=125.0

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .....++.+.+++++|.+                       ..+++++||+++..++.+...                  
T Consensus        89 ~~~~~~l~~~la~~~g~~-----------------------~~i~~~sGs~a~~~~~~~~~~------------------  127 (401)
T 1fc4_A           89 QDSHKELEQKLAAFLGME-----------------------DAILYSSCFDANGGLFETLLG------------------  127 (401)
T ss_dssp             BHHHHHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHTTHHHHCC------------------
T ss_pred             cHHHHHHHHHHHHHhCCC-----------------------cEEEeCChHHHHHHHHHHHcC------------------
Confidence            344478888899988875                       257888999999887765421                  


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                       ++..|+++...|.++..++...+.+++.+|.     +|+++|+++|++....+..+.+|+.+.+++++|.+.|+++|.+
T Consensus       128 -~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~  201 (401)
T 1fc4_A          128 -AEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCD  201 (401)
T ss_dssp             -TTCEEEEETTCCHHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHH
T ss_pred             -CCCEEEEcchhHHHHHHHHHHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHH
Confidence             3457889999999999988888888888873     5899999999864433323668888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCccc-c-hhhhhhhcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFI-C-PEFRKWLAGV-EYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~-~-~~~~~~~~gi-e~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +|+++|+++++|++|+.+... . ..+.. ..++ ..+|.++.++||+++.+.+ |++
T Consensus       202 l~~~~~~~li~De~~~~g~~~~~g~~~~~-~~~~~~~~di~~~s~sK~~~~~~g-G~~  257 (401)
T 1fc4_A          202 LADKYDALVMVDDSHAVGFVGENGRGSHE-YCDVMGRVDIITGTLGKALGGASG-GYT  257 (401)
T ss_dssp             HHHHTTEEEEEECTTTTTTSSTTSCCHHH-HTTCTTCCSEEEEESSSTTCSSSC-EEE
T ss_pred             HHHHcCCEEEEECcccccccCCCCCccHH-HcCCCcCCcEEEecchhhccCCCC-EEE
Confidence            999999999999999743321 1 11111 1222 2469999999999956665 654

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.62  E-value=9.2e-15  Score=146.54  Aligned_cols=166  Identities=14%  Similarity=0.088  Sum_probs=114.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       .++||+|||+||..++.+++.....               ++.
T Consensus        79 ~~l~~~la~~~~~~-----------------------~v~~t~ggt~A~~~al~~~~~~~~~---------------~Gd  120 (467)
T 1ax4_A           79 YDLKDKAKELFNYD-----------------------YIIPAHQGRGAENILFPVLLKYKQK---------------EGK  120 (467)
T ss_dssp             HHHHHHHHHHHCCC-----------------------EEEEESSHHHHHHHHHHHHHHHHHH---------------TTC
T ss_pred             HHHHHHHHHHcCCC-----------------------cEEEcCCcHHHHHHHHHHHHHhhcc---------------CCC
Confidence            56678888888765                       4799999999999999988753210               112


Q ss_pred             E---EEecCCCchHH-HHHHHHcCCeEEEEecC----------CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-
Q psy1596         244 V---AYCSDQAHSSV-EKAGLIGLVKMRYIESD----------DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-  308 (375)
Q Consensus       244 v---V~~S~~aH~Sv-~kaa~lg~~~v~~Vp~d----------~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-  308 (375)
                      .   |+++ ..|+.. ..++...+.+++.++.+          .++.+|+++|+++|++..  ...+.+|+++..++++ 
T Consensus       121 ~~~~viv~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~g  197 (467)
T 1ax4_A          121 AKNPVFIS-NFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAG  197 (467)
T ss_dssp             CSSCEEEE-SSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTT
T ss_pred             ccceEEEe-ccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCC
Confidence            2   6666 666444 55566777777766542          146899999999998642  0125578888888888 


Q ss_pred             ccc---ccHHHHHHHHHhcCCEEEEeccccc-CcccchhhhhhhcCC----------CcccEEEEcCcccCCCCCc
Q psy1596         309 CAF---DNLEELGPICEKEGLWLHVDAAYAG-SSFICPEFRKWLAGV----------EYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       309 Gav---Dpl~eI~~ia~~~~iwlHVDaA~gg-~~~~~~~~~~~~~gi----------e~aDSi~~d~HK~l~~P~~  370 (375)
                      |.+   +++++|+++|++||+|||+|++++. ++.+.++......++          +.+|++++++||+++.|.|
T Consensus       198 G~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G  273 (467)
T 1ax4_A          198 GQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG  273 (467)
T ss_dssp             SBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC
T ss_pred             ccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc
Confidence            664   7899999999999999999998765 222111000000111          2469999999999998865

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.62  E-value=1e-14  Score=140.41  Aligned_cols=167  Identities=12%  Similarity=-0.024  Sum_probs=126.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++++++++|.+.                     ...++|+|||+++..++.+...                   ++.
T Consensus        54 ~~l~~~la~~~~~~~---------------------~~i~~~~g~~~a~~~~~~~l~~-------------------~gd   93 (354)
T 3ly1_A           54 LMLGNKLAAHHQVEA---------------------PSILLTAGSSEGIRAAIEAYAS-------------------LEA   93 (354)
T ss_dssp             HHHHHHHHHHTTSCG---------------------GGEEEESHHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCCh---------------------HHEEEeCChHHHHHHHHHHHhC-------------------CCC
Confidence            678899999998751                     3589999999999888876432                   245


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..+|.++..+++..|.+++.+|.++++.+|+++|+++|++.    ..+.+|+++.+++++|.+-++++|.++++.
T Consensus        94 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~  169 (354)
T 3ly1_A           94 QLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTITPADVIEPWIAS  169 (354)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCCCCHHHHHHHHHT
T ss_pred             eEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence            7889999999999999888899999999888999999999999731    125577788999999999888888888777


Q ss_pred             --cCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         324 --EGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       324 --~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                        +|+++++|++|+.+..-..  ............+.+..++||+++ ....+|.+
T Consensus       170 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~  225 (354)
T 3ly1_A          170 KPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYA  225 (354)
T ss_dssp             CCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEE
T ss_pred             CCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheee
Confidence              9999999999987543110  111111111123678889999986 44556654

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.62  E-value=1.9e-15  Score=147.41  Aligned_cols=162  Identities=12%  Similarity=0.082  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+.                     ...++|+|||+++..++.++..                   ++.
T Consensus        64 ~~l~~~la~~~~~~~---------------------~~v~~~~g~~~a~~~~~~~~~~-------------------~gd  103 (381)
T 1v2d_A           64 PALREALAEEFAVEP---------------------ESVVVTSGATEALYVLLQSLVG-------------------PGD  103 (381)
T ss_dssp             HHHHHHHHHHHTSCG---------------------GGEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHhcCCCh---------------------hhEEEcCChHHHHHHHHHHhCC-------------------CCC
Confidence            566677777788751                     2489999999999998876532                   245


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC---CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---cHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD---DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---NLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d---~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---pl~eI  317 (375)
                      .|++++.+|.++..+++..|.+++.+|.+   +++.+|+++|++++++.      +.+|+++.+++++|.+-   ++++|
T Consensus       104 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i  177 (381)
T 1v2d_A          104 EVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR------TRALLLNTPMNPTGLVFGERELEAI  177 (381)
T ss_dssp             EEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             EEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcC------CEEEEECCCCCCCCCccCHHHHHHH
Confidence            78899999999999888888899999986   56889999999988532      45777788999999984   59999


Q ss_pred             HHHHHhcCCEEEEecccccCcc--cchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSF--ICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~--~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +++|+++|+++++|++|+.+..  ..+.....   ....|.++.++||+++.| +.+|++
T Consensus       178 ~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~---~~~~~~~~~s~sK~~~~~G~r~G~~  234 (381)
T 1v2d_A          178 ARLARAHDLFLISDEVYDELYYGERPRRLREF---APERTFTVGSAGKRLEATGYRVGWI  234 (381)
T ss_dssp             HHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH---CTTTEEEEEEHHHHTTCGGGCCEEE
T ss_pred             HHHHHHcCCEEEEEcCccccccCCCCCCHHHh---cCCCEEEEeechhhcCCcccceEEE
Confidence            9999999999999999987643  00111211   234699999999998644 236665

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.61  E-value=8.3e-15  Score=143.86  Aligned_cols=161  Identities=9%  Similarity=-0.011  Sum_probs=120.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ++.+++.+++++++|.+                      ...+||+|||+|+..++... .                   
T Consensus        35 ~~~~~~~~~l~~~~~~~----------------------~~v~~~~sgt~a~~~~~~~~-~-------------------   72 (379)
T 3ke3_A           35 EVMNDLLSNLKTVYNAE----------------------AAVIIPGSGTYGMEAVARQL-T-------------------   72 (379)
T ss_dssp             HHHHHHHHHHHHHHTCS----------------------EEEEEESCHHHHHHHHHHHH-C-------------------
T ss_pred             HHHHHHHHHHHHHhCCC----------------------CEEEEcCChhHHHHHHHHhC-C-------------------
Confidence            45578899999999876                      24688999999988865321 1                   


Q ss_pred             CceEEEecCCCchHHHH--HHH-Hc-CCeEEEEecCCC---------CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC
Q psy1596         241 SRLVAYCSDQAHSSVEK--AGL-IG-LVKMRYIESDDK---------LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG  307 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~k--aa~-lg-~~~v~~Vp~d~~---------g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~  307 (375)
                      ++..|++++..|++..-  .+. .+ +.+++.++.+..         +.+|+++|+++|++..     +.+|+++...|.
T Consensus        73 ~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~  147 (379)
T 3ke3_A           73 IDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK-----SAIVYAPHVETS  147 (379)
T ss_dssp             TTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----CSEEEEESEETT
T ss_pred             CCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----CcEEEEEeecCC
Confidence            23467777888877532  233 34 357888887432         3689999999996531     347888888999


Q ss_pred             cccccc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         308 ACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       308 tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|.+.|   +++|+++|++||+++|+|++++ +..... ...  .+   +|.+++++|||++.|.|+|+++
T Consensus       148 ~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~-~~~--~~---~d~~~~s~~K~l~~~~g~g~~~  211 (379)
T 3ke3_A          148 SGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLD-MKE--LG---IDVLISAPQKGWSSTPCAGLVM  211 (379)
T ss_dssp             TTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCC-HHH--HT---CSEEEECTTTTTCSCCCEEEEE
T ss_pred             CceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccc-ccc--cC---CCEEEecchhhcCCCCceEEEE
Confidence            999988   9999999999999999999998 433211 111  13   5999999999999999998874

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.61  E-value=1.7e-14  Score=140.41  Aligned_cols=171  Identities=14%  Similarity=0.018  Sum_probs=131.0

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .++++.+.+|+.+.+|++.                   +....++|+|||+++..++.+...                  
T Consensus        72 ~~l~~~la~~l~~~~g~~~-------------------~~~~v~~~~G~~~al~~~~~~l~~------------------  114 (369)
T 3cq5_A           72 VELRDELAAYITKQTGVAV-------------------TRDNLWAANGSNEILQQLLQAFGG------------------  114 (369)
T ss_dssp             HHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCS------------------
T ss_pred             HHHHHHHHHhhhhcccCCC-------------------ChHhEEECCChHHHHHHHHHHhcC------------------
Confidence            4777889999999888763                   234689999999998877765422                  


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                       ++..|++++.+|.++..++...|.+++.+|.++++.+|+++|++++++.     .+.+|+++.+++++|.+-|+++|.+
T Consensus       115 -~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~  188 (369)
T 3cq5_A          115 -PGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVER  188 (369)
T ss_dssp             -TTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred             -CCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHH
Confidence             2357889999999999988888889999999888899999999999762     1336777889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +|+.+++++++|++|+.+..- +............+.+..++||+++.| +.+|++
T Consensus       189 l~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  243 (369)
T 3cq5_A          189 IINVAPGIVIVDEAYAEFSPS-PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYF  243 (369)
T ss_dssp             HHHHCSSEEEEECTTGGGCCS-CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEE
T ss_pred             HHHhCCCEEEEECCchhhcCC-cchHHHHhhCCCCEEEEEechHhcCCcccceEEE
Confidence            999999999999999987531 111121122211458899999998744 235654

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.61  E-value=5e-15  Score=147.01  Aligned_cols=180  Identities=12%  Similarity=0.114  Sum_probs=130.7

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |..++++.+.+|+.+.+|.+..                 .+....++|+|||+++..++.+.+.                
T Consensus        84 g~~~lr~~la~~~~~~~g~~~~-----------------~~~~~i~~~~G~~~ai~~~~~~~~~----------------  130 (428)
T 1iay_A           84 GLPEFRKAIAKFMEKTRGGRVR-----------------FDPERVVMAGGATGANETIIFCLAD----------------  130 (428)
T ss_dssp             CCHHHHHHHHHHHHHHTTTCSC-----------------CCTTSCEEEEHHHHHHHHHHHHHCC----------------
T ss_pred             CcHHHHHHHHHHHHHhcCCCCC-----------------CChhhEEEccChHHHHHHHHHHhCC----------------
Confidence            4567778888888888885410                 0234579999999999888876532                


Q ss_pred             hhcCceEEEecCCCchHHHHHH-HHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAG-LIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-  313 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa-~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-  313 (375)
                         ++..|++++.+|.++..++ ...|.+++.+|.+  +++.+|+++|+++|++....+..+.+|+.+.+++++|.+-+ 
T Consensus       131 ---~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~  207 (428)
T 1iay_A          131 ---PGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDK  207 (428)
T ss_dssp             ---TTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCH
T ss_pred             ---CCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCH
Confidence               2347889999999988765 4678899999986  35689999999999875444444667788889999999988 


Q ss_pred             --HHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcC-----CCccc--EEEEcCcccCCCC-Ccceee
Q psy1596         314 --LEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAG-----VEYAN--SIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       314 --l~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~g-----ie~aD--Si~~d~HK~l~~P-~~~g~l  374 (375)
                        +++|+++|+++|+++++|+||+.+..-.   +........     + .+|  .+..++||+++.| +.+|.+
T Consensus       208 ~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~viv~~s~sK~~g~~Glr~G~~  280 (428)
T 1iay_A          208 DTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYC-NKDLVHIVYSLSKDMGLPGFRVGII  280 (428)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTS-CTTSEEEEEESTTTSSCGGGCEEEE
T ss_pred             HHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccC-CCCcEEEEecchhhcCCCCceEEEE
Confidence              9999999999999999999999843211   111222111     1 157  6789999998644 334543

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.61  E-value=2.7e-15  Score=150.27  Aligned_cols=162  Identities=10%  Similarity=-0.087  Sum_probs=118.0

Q ss_pred             hhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         155 VILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       155 ~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      ...|..+++.++.+++++++|.+.                     ..+++|+|||.++..++++.+.   .         
T Consensus       102 ~~~g~~~~~~~~~~~la~~~g~~~---------------------~~i~~~~g~taa~ea~~~a~~~---~---------  148 (438)
T 1wyu_A          102 VSQGVLQATFEYQTMIAELAGLEI---------------------ANASMYDGATALAEGVLLALRE---T---------  148 (438)
T ss_dssp             GCHHHHHHHHHHHHHHHHHHTSSE---------------------ECSCBSSHHHHHHHHHHHHHHH---H---------
T ss_pred             hhhhHHHHHHHHHHHHHHHhCCCc---------------------cceEEeCcHHHHHHHHHHHHhc---C---------
Confidence            345677777999999999999872                     2357899999443333332221   1         


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                            ++..|++++.+|.++..+++    ..|.+++.||+ +++.+|+++    |++      .+.+|+++.+ |.+|.
T Consensus       149 ------~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~~------~t~~v~i~~p-n~tG~  210 (438)
T 1wyu_A          149 ------GRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VGE------EVGAVVVQNP-NFLGA  210 (438)
T ss_dssp             ------TCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CCT------TEEEEEEESS-CTTSB
T ss_pred             ------CCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hCC------CeEEEEEECC-CCCeE
Confidence                  24578999999999987763    46889999997 568898876    322      2568888888 99999


Q ss_pred             cccHHHHHHHHHhcCCEEEEecc-cccCcccchhhhhhhcCCCcccEEEEcCcc-----cCCCCCcceeeC
Q psy1596         311 FDNLEELGPICEKEGLWLHVDAA-YAGSSFICPEFRKWLAGVEYANSIAFNPSK-----WLMVHFDCTAMW  375 (375)
Q Consensus       311 vDpl~eI~~ia~~~~iwlHVDaA-~gg~~~~~~~~~~~~~gie~aDSi~~d~HK-----~l~~P~~~g~l~  375 (375)
                      ++|+++|+++|+++|+|+|||.. ++.+.+..+  ..  .   .+|.+++|.||     |++.| ++|+++
T Consensus       211 ~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~--~~--~---g~D~~~~s~kk~~~~~~~~Gp-~~G~l~  273 (438)
T 1wyu_A          211 LEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP--GA--Y---GADIAVGDGQSLGLPMGFGGP-HFGFLA  273 (438)
T ss_dssp             CCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH--HH--H---TCSEEEEECTTTTCCCGGGCS-CCEEEE
T ss_pred             EecHHHHHHHHHHcCCEEEEEechhhccCcCCC--cc--C---CCCEEEECCcccCCCccCCCC-CeeEEE
Confidence            99999999999999999997754 332222222  11  1   36999999888     67778 888764

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.61  E-value=9.5e-16  Score=164.27  Aligned_cols=169  Identities=12%  Similarity=0.036  Sum_probs=126.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      ..++.+.+++++|.+                      ...++++|+|++|..++.+...                   ++
T Consensus       175 i~e~e~~lA~~~gae----------------------~~i~v~nGtt~an~~ai~al~~-------------------pG  213 (730)
T 1c4k_A          175 AVAAEKHAARVYNAD----------------------KTYFVLGGSSNANNTVTSALVS-------------------NG  213 (730)
T ss_dssp             HHHHHHHHHHHTTCS----------------------EEEEESSHHHHHHHHHHHHHCC-------------------TT
T ss_pred             HHHHHHHHHHHHCCC----------------------cEEEECCHHHHHHHHHHHHhcC-------------------CC
Confidence            378899999999987                      1245666667899888876532                   34


Q ss_pred             eEEEecCCCchHHHHH-HHHcCCeEEEEecCCC-----CCcCHHHH-----HHHHHHh-hh--cCCcc-EEEEEEcCCCC
Q psy1596         243 LVAYCSDQAHSSVEKA-GLIGLVKMRYIESDDK-----LSLRGDKL-----IEAIERD-KK--KHLIP-FFVCGTLGTTG  307 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~ka-a~lg~~~v~~Vp~d~~-----g~md~e~L-----e~aI~~~-~~--~g~~p-~~Vv~t~GtT~  307 (375)
                      ..|+++..+|.|+..+ +++.|.+++.++.+.+     |.+|+++|     +++|++. .+  ....| .+|+++.+ |.
T Consensus       214 D~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~  292 (730)
T 1c4k_A          214 DLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TY  292 (730)
T ss_dssp             CEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CT
T ss_pred             CEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CC
Confidence            5899999999999998 7788888888876422     45899988     7777543 11  01123 47777777 57


Q ss_pred             ccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC----Cccc----EEEEcCcccCCCCCcceee
Q psy1596         308 ACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV----EYAN----SIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       308 tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi----e~aD----Si~~d~HK~l~~P~~~g~l  374 (375)
                      +|.+.|+++|+++|+++|+++|||+||+++..+.+.++.. ..+    ..+|    .++.++||+++.|.++|++
T Consensus       293 ~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~-~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I  366 (730)
T 1c4k_A          293 DGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNS-SPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQI  366 (730)
T ss_dssp             TSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGG-CTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEE
T ss_pred             CCeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCCc-CcccccccCCCCCCEEEEECCCCCCCCCCCEEEE
Confidence            9999999999999999999999999998765555543311 111    1367    9999999999988888876

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.61  E-value=1.7e-14  Score=141.19  Aligned_cols=198  Identities=12%  Similarity=0.052  Sum_probs=141.7

Q ss_pred             hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596         128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT  207 (375)
Q Consensus       128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG  207 (375)
                      +.+...+.+.+...+......|..    ..|..++++++.+|+.+.+|++.                   ++...++|+|
T Consensus        51 ~~v~~a~~~~~~~~~~~~~~~y~~----~~g~~~lr~~la~~l~~~~g~~~-------------------~~~~i~~~~g  107 (398)
T 3ele_A           51 QIVNDTIKELVTDYDSVALHGYTS----AQGDVETRAAIAEFLNNTHGTHF-------------------NADNLYMTMG  107 (398)
T ss_dssp             HHHHHHHHHHHHHSCHHHHHSCCC----TTCCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESS
T ss_pred             HHHHHHHHHHHhcCCccccCCcCC----CCCcHHHHHHHHHHHHHHhCCCC-------------------ChHHEEEccC
Confidence            445555555555433221223321    24556788999999999999763                   3456899999


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc-eEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHH
Q psy1596         208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR-LVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEA  285 (375)
Q Consensus       208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~-~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~a  285 (375)
                      ||+++..++.+...                   ++ ..|++...+|.++..++...|.+++.+|.++ ++.+|+++|+++
T Consensus       108 ~~~al~~~~~~l~~-------------------~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~  168 (398)
T 3ele_A          108 AAASLSICFRALTS-------------------DAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEER  168 (398)
T ss_dssp             HHHHHHHHHHHHCC-------------------STTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHT
T ss_pred             HHHHHHHHHHHHcC-------------------CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHH
Confidence            99999988876532                   34 5788999999999999988889999999874 578999999999


Q ss_pred             HHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHHHHh------cCCEEEEecccccCcccchhhhhhhcCCCcccE
Q psy1596         286 IERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPICEK------EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANS  356 (375)
Q Consensus       286 I~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~ia~~------~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDS  356 (375)
                      +++.      +.+|+++.++++||.+-+   +++|+++|++      +|+++++|++|+....-...... .......+.
T Consensus       169 l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~i  241 (398)
T 3ele_A          169 INAH------TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPF-VTKYYDNTL  241 (398)
T ss_dssp             CCTT------EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCC-GGGTCSSEE
T ss_pred             hCcC------CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCC-hHhhcCCeE
Confidence            8643      447777889999999865   7788899999      99999999999875421100000 111123467


Q ss_pred             EEEcCcccCC-CCCcceee
Q psy1596         357 IAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       357 i~~d~HK~l~-~P~~~g~l  374 (375)
                      +..++||+++ ....+|.+
T Consensus       242 ~~~s~sK~~~~~G~r~G~~  260 (398)
T 3ele_A          242 VCYSYSKSLSLPGERIGYV  260 (398)
T ss_dssp             EEEESTTTSSCTTTCCEEE
T ss_pred             EEEehhhcCCCccceeEEE
Confidence            8889999987 44556654

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.60  E-value=3.4e-15  Score=143.38  Aligned_cols=161  Identities=14%  Similarity=0.153  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       ..++|+|||+++..++.+...                   ++.
T Consensus        41 ~~l~~~la~~~g~~-----------------------~~~~~~~gt~a~~~~~~~~~~-------------------~gd   78 (347)
T 1jg8_A           41 NELERLAAETFGKE-----------------------AALFVPSGTMGNQVSIMAHTQ-------------------RGD   78 (347)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCc-----------------------eEEEecCcHHHHHHHHHHhcC-------------------CCC
Confidence            56778899988876                       368999999999887755321                   345


Q ss_pred             EEEecCCCchHHHH---HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-ccc---ccHHH
Q psy1596         244 VAYCSDQAHSSVEK---AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-CAF---DNLEE  316 (375)
Q Consensus       244 vV~~S~~aH~Sv~k---aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-Gav---Dpl~e  316 (375)
                      .|++++.+|.+...   .+.+.+.+++.| .++++.+|+++|+++|++....+..+.+|+.+.+++++ |.+   +++++
T Consensus        79 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~  157 (347)
T 1jg8_A           79 EVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKE  157 (347)
T ss_dssp             EEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred             EEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHH
Confidence            78899999987654   346678888888 55678899999999986421011135678888888999 887   45789


Q ss_pred             HHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      |+++|+++|+++++|+||..+....  .....+..   .+|.+++++||+++.|.|
T Consensus       158 i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~---~~d~~~~s~sK~l~~~~G  210 (347)
T 1jg8_A          158 ICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG---YADSVMFCLSKGLCAPVG  210 (347)
T ss_dssp             HHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH---TCSEEEEESSSTTCCSSC
T ss_pred             HHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc---cccEEEEecccccCCCce
Confidence            9999999999999999875321110  01112222   369999999999988865

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.60  E-value=1.4e-15  Score=155.19  Aligned_cols=169  Identities=11%  Similarity=-0.024  Sum_probs=119.3

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      ...++|+.+++|+++++|.+.                   +. ...++.++|+++|+.++.+..+               
T Consensus        87 ~~~~le~~~~~~~a~~~g~~~-------------------~~~~~~V~~~sGs~an~~~~~all~---------------  132 (483)
T 1rv3_A           87 HIDELETLCQKRALQAYGLDP-------------------QCWGVNVQPYSGSPANFAVYTALVE---------------  132 (483)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCT-------------------TTEEEECCCSSHHHHHHHHHHHHTC---------------
T ss_pred             hHHHHHHHHHHHHHHHhCCCc-------------------ccCceEEEECCcHHHHHHHHHHhcC---------------
Confidence            456788899999999999872                   11 1235556666888877765421               


Q ss_pred             hhhcCceEEEecCCCchHHHHH--------HHHcC--CeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKA--------GLIGL--VKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT  305 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~ka--------a~lg~--~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt  305 (375)
                          ++..|++++.+|.++...        +.+.|  .+++.++++ +++.+|+++|++++++..     |.+|++ ..+
T Consensus       133 ----pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~-----tklIi~-~~s  202 (483)
T 1rv3_A          133 ----PHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFH-----PKLIIA-GTS  202 (483)
T ss_dssp             ----TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC-----CSEEEE-CCS
T ss_pred             ----CCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcC-----CcEEEE-eCC
Confidence                356788999888777542        22223  344555556 679999999999998431     446666 555


Q ss_pred             CCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         306 TGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       306 T~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +.+ .+.|+++|+++|+++|+++++|+||+.+.........   .++.+|.+++++||++..|.+ |+++
T Consensus       203 n~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~---p~~~~div~~s~~K~l~Gprg-G~i~  267 (483)
T 1rv3_A          203 CYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPS---PFEHCHVVTTTTHKTLRGCRA-GMIF  267 (483)
T ss_dssp             SCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCC---GGGTCSEEEEESSGGGCCCSC-EEEE
T ss_pred             cCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCC---CCCCCcEEEecCcccCCCCCc-eEEE
Confidence            555 8899999999999999999999999865432211111   122579999999999989988 7763

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.60  E-value=1.2e-14  Score=142.60  Aligned_cols=162  Identities=11%  Similarity=0.062  Sum_probs=117.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++||+|+..++.+++...     .       .+..++.
T Consensus        37 ~~l~~~la~~~~~~-----------------------~~i~~~sGt~a~~~al~~~~~~~-----~-------~~~~~g~   81 (390)
T 3b8x_A           37 KQYETQFAKTFGSK-----------------------YAVMVSSGSTANLLMIAALFFTK-----K-------PRLKKGD   81 (390)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHTTSSS-----S-------CSCCTTC
T ss_pred             HHHHHHHHHHHCCC-----------------------cEEEECCHHHHHHHHHHHHHhhh-----h-------cCCCCcC
Confidence            67778888888865                       37999999999999887763100     0       0012345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..+++..|.+++.++++++ +.+|+++|+++|+++      +.+|+++   +.+|..+|+++|.++|+
T Consensus        82 ~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~~g~~~~~~~i~~l~~  152 (390)
T 3b8x_A           82 EIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDS------TKAILTV---NLLGNPNNFDEINKIIG  152 (390)
T ss_dssp             EEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTT------EEEEEEE---CGGGCCCCHHHHHHHHT
T ss_pred             EEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcC------CeEEEEE---CCccChhhHHHHHHHHH
Confidence            7999999999999999888889999999865 999999999998653      3355554   36788999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCC-CcccEEEEcCcccCCCCCcceee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGV-EYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gi-e~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++|+++|+|+||+.+.....  +.  .|. ....++++...|.++.+.+ |++
T Consensus       153 ~~~~~li~D~a~~~g~~~~~--~~--~g~~~~~~~~s~~~~k~~~~g~g-G~~  200 (390)
T 3b8x_A          153 GRDIILLEDNCESMGATFNN--KC--AGTFGLMGTFSSFYSNHIATMEG-GCI  200 (390)
T ss_dssp             TSCCEEEEECTTCTTCEETT--EE--TTSSSSEEEEECCTTSSSCSSSC-EEE
T ss_pred             HcCCEEEEECcCcccCEECC--cc--cccccceEEEEccCCCCCccCCc-eEE
Confidence            99999999999997654321  11  121 1234555444454555555 654

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.60  E-value=4.4e-15  Score=147.89  Aligned_cols=182  Identities=16%  Similarity=0.160  Sum_probs=132.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+..|....                 .+....++|+|||+||..++.+.+.               
T Consensus        86 ~g~~~l~~~la~~~~~~~~~~~~-----------------~~~~~v~~~~gg~~a~~~~~~~l~~---------------  133 (435)
T 3piu_A           86 HGLPAFKKAMVDFMAEIRGNKVT-----------------FDPNHLVLTAGATSANETFIFCLAD---------------  133 (435)
T ss_dssp             TCCHHHHHHHHHHHHHHTTTSSC-----------------CCGGGEEEEEHHHHHHHHHHHHHCC---------------
T ss_pred             CCcHHHHHHHHHHHHHhhCCCCC-----------------CCHHHEEEcCChHHHHHHHHHHhcC---------------
Confidence            45567778888888877663210                 0234689999999999998876532               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                          ++..|++++.+|.++..++. ..|.+++.+|.++  ++.+|+++|+++|++..+.+..+.+|+.+.+++++|.+  
T Consensus       134 ----~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~  209 (435)
T 3piu_A          134 ----PGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMT  209 (435)
T ss_dssp             ----TTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCC
T ss_pred             ----CCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCC
Confidence                24578899999999998886 6788999999874  46799999999998765555557788888899999988  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhc--CC------CcccEEEEcCcccCCCC-Ccceee
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLA--GV------EYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~--gi------e~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                       +++++|+++|++||+++++|++|+++.+-.+   .......  ++      ..-..+..++||+++.| +.+|++
T Consensus       210 ~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~  285 (435)
T 3piu_A          210 RNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAI  285 (435)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEE
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEE
Confidence             6678999999999999999999987432111   1111111  11      01136788999998733 445654

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.60  E-value=1.9e-14  Score=138.83  Aligned_cols=159  Identities=12%  Similarity=0.020  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       ..++++|||+|+..++.+.+...                 .+.
T Consensus        51 ~~l~~~la~~~~~~-----------------------~~i~~~~g~~a~~~a~~~~~~~g-----------------~~~   90 (359)
T 3pj0_A           51 EDFETKIAKILGKQ-----------------------SAVFFPSGTMAQQIALRIWADRK-----------------ENR   90 (359)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHHHHHH-----------------TCC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHHhcC-----------------CCc
Confidence            78889999999887                       14888999999999888766531                 123


Q ss_pred             EEEecCCCchHHHHH--H-HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-ccccc---HHH
Q psy1596         244 VAYCSDQAHSSVEKA--G-LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-CAFDN---LEE  316 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka--a-~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-GavDp---l~e  316 (375)
                      +|+++...|++....  . .+.+.+++.+|. +++.+|+++|+++ .+      .+.+|+++.+++++ |.+.+   +++
T Consensus        91 vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~  162 (359)
T 3pj0_A           91 RVAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEK  162 (359)
T ss_dssp             EEEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHH
T ss_pred             EEEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHH
Confidence            577888888877643  2 456888888887 5688999999987 21      24477777776666 67755   555


Q ss_pred             HHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++|++||+|+|+|+||..+....  .......   ..+|.+++++||+++.|.+ |++
T Consensus       163 l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~  218 (359)
T 3pj0_A          163 ISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AIL  218 (359)
T ss_dssp             HHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EEE
T ss_pred             HHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EEE
Confidence            5999999999999999987653211  0112222   3469999999999998876 543

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.60  E-value=8.4e-15  Score=144.87  Aligned_cols=152  Identities=12%  Similarity=-0.019  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      ..++.+.+++++|.+                       ..+++++||+|+..++.+...                   ++
T Consensus        67 ~~~l~~~la~~~g~~-----------------------~~i~~~sG~~a~~~~l~~~~~-------------------~g  104 (398)
T 1gc0_A           67 LNLLEARMASLEGGE-----------------------AGLALASGMGAITSTLWTLLR-------------------PG  104 (398)
T ss_dssp             HHHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TT
T ss_pred             HHHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhc-------------------CC
Confidence            378888999998865                       368889999999988876521                   23


Q ss_pred             eEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ..|+++...|.++...+    ...+.+++.++.+     |+++|+++|+++      +.+|+++.+++++|.+.|+++|+
T Consensus       105 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~  173 (398)
T 1gc0_A          105 DEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVA  173 (398)
T ss_dssp             CEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHH
T ss_pred             CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHH
Confidence            57889999999988876    3457788888764     899999988642      55888899999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      ++|+++|+++|+|++|+.+....+.    ..   .+|.++.++||+++.|.+  +|++
T Consensus       174 ~l~~~~~~~li~D~~~~~~~~~~~~----~~---~~d~~~~S~sK~~~~~~~~~~G~l  224 (398)
T 1gc0_A          174 KIARKHGATVVVDNTYCTPYLQRPL----EL---GADLVVHSATKYLSGHGDITAGIV  224 (398)
T ss_dssp             HHHGGGTCEEEEECTTTHHHHCCGG----GG---TCSEEEEETTTTTTCSSSCCCEEE
T ss_pred             HHHHHcCCEEEEECCCcccccCCch----hh---CceEEEECCccccCCCCCCeEEEE
Confidence            9999999999999999976543321    11   369999999999998876  5765

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.60  E-value=5.3e-15  Score=143.91  Aligned_cols=171  Identities=9%  Similarity=0.087  Sum_probs=128.8

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      +..++++++.+++++.+|.+.                   +....++|+|||+++..++.+...                
T Consensus        68 ~~~~~~~~l~~~l~~~~g~~~-------------------~~~~v~~~~g~~~a~~~~~~~~~~----------------  112 (391)
T 4dq6_A           68 RPDSYNESIVNWLYRRHNWKI-------------------KSEWLIYSPGVIPAISLLINELTK----------------  112 (391)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESCHHHHHHHHHHHHSC----------------
T ss_pred             CCHHHHHHHHHHHHHHhCCCC-------------------cHHHeEEcCChHHHHHHHHHHhCC----------------
Confidence            346777999999999999653                   234689999999999988876532                


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC----CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD----DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d----~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                         ++..|+++..+|.++..++...+.+++.+|.+    .++.+|+++|+++|++       +.+|+.+.+++++|.+  
T Consensus       113 ---~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~nptG~~~~  182 (391)
T 4dq6_A          113 ---ANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPHNPVGRVWT  182 (391)
T ss_dssp             ---TTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTTTTBCCC
T ss_pred             ---CCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCCCCcCcC
Confidence               24578899999999999998888899999887    3456999999999865       3477788899999999  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC----cccEEEEcCcccCCC-CCcceee
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE----YANSIAFNPSKWLMV-HFDCTAM  374 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie----~aDSi~~d~HK~l~~-P~~~g~l  374 (375)
                       +++++|+++|++||+++++|++|+.+..-..... .+..+.    ....+..++||+++. ....|.+
T Consensus       183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~  250 (391)
T 4dq6_A          183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHI-PMASISKEFEKNTITCMAPTKTFNIAGLQSSYV  250 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCC-CGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEE
T ss_pred             HHHHHHHHHHHHHcCCEEEeeccccccccCCCCcc-CHHHcCccccCcEEEEEechhhccCcccceEEE
Confidence             8899999999999999999999987542110000 011110    123678899999863 3445543

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.59  E-value=2.4e-14  Score=146.44  Aligned_cols=145  Identities=10%  Similarity=0.045  Sum_probs=121.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|...+++++.+|+.+..|++.                   ++...++|+|||+++..++.+...               
T Consensus       134 ~G~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~---------------  179 (500)
T 3tcm_A          134 QGIHGLRDAIASGIASRDGFPA-------------------NADDIFLTDGASPGVHLMMQLLIR---------------  179 (500)
T ss_dssp             TCCHHHHHHHHHHHHHHHSSCC-------------------CGGGEEEESSSHHHHHHHHHHHCC---------------
T ss_pred             cChHHHHHHHHHHHHhhcCCCC-------------------CcccEEEcCCHHHHHHHHHHHHcC---------------
Confidence            5667788999999999889874                   345689999999999888776531               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                         .++..|+++..+|.++..++...|.+++.++++++  +.+|+++|+++|++...+|..+.+|+++.++|+||.+   
T Consensus       180 ---~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~  256 (500)
T 3tcm_A          180 ---NEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAE  256 (500)
T ss_dssp             ---STTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCH
T ss_pred             ---CCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCH
Confidence               13458999999999999999888889999998654  5899999999999876666567788888999999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +++++|+++|+++|+++++|.+|+...
T Consensus       257 ~~l~~i~~la~~~~~~li~Deay~~~~  283 (500)
T 3tcm_A          257 ENQYDIVKFCKNEGLVLLADEVYQENI  283 (500)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred             HHHHHHHHHHHHcCCEEEEecCccccc
Confidence            678888889999999999999998754

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.59  E-value=1.9e-14  Score=142.62  Aligned_cols=151  Identities=13%  Similarity=0.032  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++++|||+|+..++.++..                   ++.
T Consensus        69 ~~l~~~la~~~g~~-----------------------~~~~~~sGt~A~~~al~~~~~-------------------~gd  106 (392)
T 3qhx_A           69 TALEAALAAVEDAA-----------------------FGRAFSSGMAAADCALRAMLR-------------------PGD  106 (392)
T ss_dssp             HHHHHHHHHHTTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            67888999998865                       379999999999988876522                   245


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|.+....+    ...+.+++.++.+     |+++|+++|+++      +.+|++..+++++|.+.|+++|++
T Consensus       107 ~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~  175 (392)
T 3qhx_A          107 HVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA-----DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQ  175 (392)
T ss_dssp             EEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             EEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHH
Confidence            7899999999887776    2357788888875     899999998653      457888889999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|+++|+++|+|++|+.+....+.    -.   .+|.++.++||+++.+.+  +|++
T Consensus       176 la~~~g~~li~D~~~~~~~~~~~~----~~---~~di~~~S~sK~lg~~g~~~~G~v  225 (392)
T 3qhx_A          176 LGADSSAKVLVDNTFASPALQQPL----SL---GADVVLHSTTKYIGGHSDVVGGAL  225 (392)
T ss_dssp             HHHHHTCEEEEECTTTCTTTCCGG----GG---TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred             HHHHcCCEEEEECCCcccccCChH----Hh---CCcEEEEcCccccCCCCCceEEEE
Confidence            999999999999999876433221    11   369999999999987643  6654

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.59  E-value=8.9e-15  Score=145.04  Aligned_cols=174  Identities=11%  Similarity=0.016  Sum_probs=129.0

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHH--HHHHHHhhccCCcch
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGR--TEAIRKYQQSHPELE  235 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar--~~~~~~~~~~~~~~~  235 (375)
                      |..++++.+.+|+.+.+|++.                   +....++|+|||+++..++.+..  .              
T Consensus        83 g~~~lr~~la~~~~~~~g~~~-------------------~~~~i~~t~g~t~al~~~~~~l~~~~--------------  129 (437)
T 3g0t_A           83 GLPELKQEASRFAKLFVNIDI-------------------PARACVPTVGSMQGCFVSFLVANRTH--------------  129 (437)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESHHHHHHHHHHHHHTTSC--------------
T ss_pred             ChHHHHHHHHHHHHHhhCCCC-------------------CcccEEEeCCHHHHHHHHHHHHhcCC--------------
Confidence            456778889999998888773                   34568999999999998887653  2              


Q ss_pred             hhhhcCce--EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         236 HAEINSRL--VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       236 ~~~~~~~~--vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                           ++.  .|+++..+|.++..++...+.+++.||.+ +.+.+|+++|+++|+..     .+.+|+.+.+++++|.+-
T Consensus       130 -----~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~  199 (437)
T 3g0t_A          130 -----KNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTG-----QFCSIIYSNPNNPTWQCM  199 (437)
T ss_dssp             -----TTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTT-----CCCEEEEESSCTTTCCCC
T ss_pred             -----CCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcC-----CceEEEEeCCCCCCCCcC
Confidence                 234  68889999999999998878899999986 45579999999999422     144677788899999885


Q ss_pred             c---HHHHHHHHHhcCCEEEEecccccCcccch-hh------hhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         313 N---LEELGPICEKEGLWLHVDAAYAGSSFICP-EF------RKWLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       313 p---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~-~~------~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                      +   +++|+++|++||+++++|++|+....-.. ..      ...+.+....+.++.++||+++ ....+|.+
T Consensus       200 ~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  272 (437)
T 3g0t_A          200 TDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVL  272 (437)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEE
T ss_pred             CHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEE
Confidence            4   88889999999999999999986432100 00      0011112235688999999987 33445654

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.59  E-value=3e-14  Score=140.61  Aligned_cols=159  Identities=14%  Similarity=0.007  Sum_probs=123.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|......++.+++++++|.+                       ..+++++||++|..++.+...               
T Consensus       100 ~g~~~~~~~l~~~la~~~g~~-----------------------~~i~~~sGt~a~~~~l~~~~~---------------  141 (409)
T 3kki_A          100 LQNDYDKPMIEKRLAKFTGFD-----------------------ECLLSQSGWNANVGLLQTICQ---------------  141 (409)
T ss_dssp             GCSTTTSCHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHHCC---------------
T ss_pred             cCCcHHHHHHHHHHHHHhCCC-----------------------eEEEecchHHHHHHHHHHhcC---------------
Confidence            343344467888999998876                       257888999999988875432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                          ++..|+++...|.++..++.+.+.+++.++.     +|+++|+++|++..     +.+|+.+..++++|.+.|+++
T Consensus       142 ----~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~  207 (409)
T 3kki_A          142 ----PNTNVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAE  207 (409)
T ss_dssp             ----TTCEEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHH
T ss_pred             ----CCCEEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHH
Confidence                3458899999999999999888888887764     68999999998642     347888889999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCC-CcccEEEEcCcccCCCC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGV-EYANSIAFNPSKWLMVH  368 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gi-e~aDSi~~d~HK~l~~P  368 (375)
                      |+++|++||+||++|++|+++.+--  ..... ..++ ..+|.++.++||+++.+
T Consensus       208 l~~la~~~~~~li~De~~~~g~~g~~g~~~~~-~~~~~~~~di~~~s~sK~~~~~  261 (409)
T 3kki_A          208 LVNISKEFGCALLVDESHSLGTHGPNGAGLLA-ELGLTREVHFMTASLAKTFAYR  261 (409)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTSSGGGCCHHH-HHTCGGGCSEEEEESSSTTCSS
T ss_pred             HHHHHHHcCCEEEEECCccccccCCCCCcchh-hcCCCCCCCEEEeecchhhCCC
Confidence            9999999999999999998754310  00111 1122 35799999999999866

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.58  E-value=4.6e-14  Score=137.50  Aligned_cols=160  Identities=10%  Similarity=-0.051  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.+.+++++|.+                       ..+++++||+++..++.+...                   
T Consensus        84 ~~~~~l~~~la~~~g~~-----------------------~~i~~~sGt~a~~~~~~~~~~-------------------  121 (384)
T 1bs0_A           84 VVHQALEEELAEWLGYS-----------------------RALLFISGFAANQAVIAAMMA-------------------  121 (384)
T ss_dssp             HHHHHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHHHHhCCC-----------------------cEEEeCCcHHHHHHHHHHhCC-------------------
Confidence            44477888899988876                       268888889999888765421                   


Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      ++..|+++...|.++..++...|.+++.+|.     +|+++|+++|++...   .+.+|+....++++|.+.|+++|.++
T Consensus       122 ~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l  193 (384)
T 1bs0_A          122 KEDRIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCP---GQQMVVTEGVFSMDGDSAPLAEIQQV  193 (384)
T ss_dssp             TTCEEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCS---SCEEEEEESBCTTTCCBCCHHHHHHH
T ss_pred             CCcEEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCC---CCeEEEEeCCCCCCCCccCHHHHHHH
Confidence            3457889999999999999888889988884     589999999975421   14577777788999999999999999


Q ss_pred             HHhcCCEEEEecccccCccc-c-hhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         321 CEKEGLWLHVDAAYAGSSFI-C-PEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~-~-~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++|+++++|++|+.+..- . ...... .+ ...|.++.++||+++ |.| |++
T Consensus       194 ~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~-~~~di~~~s~sK~~~-~~G-G~~  245 (384)
T 1bs0_A          194 TQQHNGWLMVDDAHGTGVIGEQGRGSCWL-QK-VKPELLVVTFGKGFG-VSG-AAV  245 (384)
T ss_dssp             HHHTTCEEEEECTTTTTTSSGGGCCHHHH-TT-CCCSEEEEESSSTTS-SCC-EEE
T ss_pred             HHHcCcEEEEECCcccceecCCCCchHHh-cC-CCCcEEEeeccchhh-ccC-cEE
Confidence            99999999999999865421 0 001111 12 246999999999987 555 654

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.58  E-value=9.9e-15  Score=144.93  Aligned_cols=172  Identities=13%  Similarity=0.052  Sum_probs=130.4

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .++++++.+|+++.+|++.                   +....+||+||++|+..++.+++.                  
T Consensus        99 ~~l~~~l~~~l~~~~g~~~-------------------~~~~v~~~~g~~ea~~~a~~~~~~------------------  141 (421)
T 3l8a_A           99 DDLYQAVIDWERKEHDYAV-------------------VKEDILFIDGVVPAISIALQAFSE------------------  141 (421)
T ss_dssp             HHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESCHHHHHHHHHHHHSC------------------
T ss_pred             HHHHHHHHHHHHHHhCCCC-------------------CHHHEEEcCCHHHHHHHHHHHhcC------------------
Confidence            5677899999999999763                   334689999999999999887532                  


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecC---CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---cc
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD---DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DN  313 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d---~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dp  313 (375)
                       ++..|++...+|.++..++...+.+++.+|.+   .++.+|+++|+++|++.     .+.+|+++.+.+++|.+   ++
T Consensus       142 -~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~~~~~~  215 (421)
T 3l8a_A          142 -KGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRVWDNDD  215 (421)
T ss_dssp             -TEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBCCCHHH
T ss_pred             -CCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCcCCHHH
Confidence             24578899999999999988888889999874   34579999999999742     14477778899999998   89


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCcccchh---hhhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSSFICPE---FRKWLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~---~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                      +++|+++|++||++|++|++|++...-...   +..........+.+..+++|+++ ..+.+|.+
T Consensus       216 l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~  280 (421)
T 3l8a_A          216 LIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA  280 (421)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEE
T ss_pred             HHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeE
Confidence            999999999999999999999875431110   11100011123577899999986 33555654

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.58  E-value=1.6e-14  Score=141.57  Aligned_cols=171  Identities=11%  Similarity=-0.012  Sum_probs=129.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+..|.+.                   ++...++|+|||+++..++.+..+               
T Consensus        68 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~~t~g~~~al~~~~~~l~~---------------  113 (385)
T 1b5p_A           68 AGIPELREALAEKFRRENGLSV-------------------TPEETIVTVGGSQALFNLFQAILD---------------  113 (385)
T ss_dssp             TCCHHHHHHHHHHHHHTTCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------ChHHEEEcCChHHHHHHHHHHhcC---------------
Confidence            3567788899999998888763                   234689999999999888765422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|+++..+|.++...++..|.+++.||.++  ++.+|+++|+++|++.      +.+|+.+.++|+||.+   
T Consensus       114 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~  183 (385)
T 1b5p_A          114 ----PGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYPK  183 (385)
T ss_dssp             ----TTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcCH
Confidence                345788999999999999888888999999974  5689999999988542      4467778899999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +++++|+++|+++|+++++|++|+....-.  +.+... ..  ..+.+..+++|+++.| .-+|.+
T Consensus       184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~--~~~i~~~s~SK~~~~~G~RiG~~  246 (385)
T 1b5p_A          184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRV-AP--EHTLTVNGAAKAFAMTGWRIGYA  246 (385)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT-CT--TTEEEEEESTTTTTCGGGCCEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHc-CC--CCEEEEEechhhcCCcccceEEE
Confidence            569999999999999999999998754310  111111 11  2367788999997644 225654

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.58  E-value=8.3e-15  Score=145.30  Aligned_cols=173  Identities=11%  Similarity=0.016  Sum_probs=131.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++++.+|+.+.+|.+.                   +.. ..++|+|||+++..++.+...              
T Consensus        77 ~g~~~l~~~la~~l~~~~g~~~-------------------~~~~~v~~~~g~~~a~~~~~~~~~~--------------  123 (429)
T 1yiz_A           77 FGHPRLVQALSKLYSQLVDRTI-------------------NPMTEVLVTVGAYEALYATIQGHVD--------------  123 (429)
T ss_dssp             SCCHHHHHHHHHHHHHHHTSCC-------------------CTTTSEEEESHHHHHHHHHHHHHCC--------------
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CCcCCEEEecChHHHHHHHHHHhcC--------------
Confidence            4567788899999999889763                   334 689999999999988876532              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC----------CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD----------KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT  305 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~----------~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt  305 (375)
                           ++..|+++..+|.++..++...|.+++.+|.+.          ++.+|+++|+++|++.      +.+|+++.++
T Consensus       124 -----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~  192 (429)
T 1yiz_A          124 -----EGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMIIINTPH  192 (429)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEEEEESSC
T ss_pred             -----CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEEEECCCC
Confidence                 234788999999999998888888999999865          4689999999998532      4577778899


Q ss_pred             CCccccc---cHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         306 TGACAFD---NLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       306 T~tGavD---pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +++|.+-   ++++|+++|++||+++++|++|++...-..   .+.. +.+....|.+..++||+++.| +.+|++
T Consensus       193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~s~sK~~~~~G~r~G~~  267 (429)
T 1yiz_A          193 NPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICT-LPGMWERTITIGSAGKTFSLTGWKIGWA  267 (429)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGG-STTTGGGEEEEEEHHHHHTCGGGCCEEE
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhh-ccCCcCceEEEecchhccCCCCcceEEE
Confidence            9999985   599999999999999999999997543111   1111 111234689999999987633 226654

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.57  E-value=5e-14  Score=140.13  Aligned_cols=151  Identities=9%  Similarity=0.047  Sum_probs=122.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+++++++|.+                       ..++++||++|+..++.+...                   ++.
T Consensus        65 ~~l~~~ia~~~g~~-----------------------~~i~~~~g~~ai~~~~~~l~~-------------------~gd  102 (404)
T 1e5e_A           65 SNLEGKIAFLEKTE-----------------------ACVATSSGMGAIAATVLTILK-------------------AGD  102 (404)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCChHHHHHHHHHHHhC-------------------CCC
Confidence            57888888888875                       368899999998888765421                   345


Q ss_pred             EEEecCCCchHHHH----HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEK----AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~k----aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.++..    .+...|.+++.+|.+     |+++|+++|++.      +.+|+++.+++++|.+.|+++|++
T Consensus       103 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~  171 (404)
T 1e5e_A          103 HLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCK  171 (404)
T ss_dssp             EEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             EEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHH
Confidence            78899999999888    556678899999875     788999988643      458888999999999999999999


Q ss_pred             HHHh-cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEK-EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~-~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|++ +|+++++|++|+.+....|. .   .   .+|.++.++||+++.|-+  +|++
T Consensus       172 la~~~~~~~li~De~~~~~~~~~~~-~---~---~~di~~~S~sK~~~~~g~ri~G~~  222 (404)
T 1e5e_A          172 DAHSQEGVLVIADNTFCSPMITNPV-D---F---GVDVVVHSATKYINGHTDVVAGLI  222 (404)
T ss_dssp             HHHTSTTCEEEEECTTTCTTTCCGG-G---G---TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred             HHHhhcCCEEEEECCCchhhhCCcc-c---c---CCEEEEEcCccccCCCCCCeEEEE
Confidence            9999 99999999999987643331 1   1   369999999999998877  5765

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.57  E-value=1.7e-14  Score=140.78  Aligned_cols=154  Identities=14%  Similarity=0.086  Sum_probs=119.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       .+++|+|||+|+..++.+.+-                  .++.
T Consensus        42 ~~l~~~la~~~~~~-----------------------~~~~~~~gt~al~~~~~~~~~------------------~~gd   80 (393)
T 1mdo_A           42 QELEAAFCRLTGNQ-----------------------YAVAVSSATAGMHIALMALGI------------------GEGD   80 (393)
T ss_dssp             HHHHHHHHHHHCCS-----------------------EEEEESCHHHHHHHHHHHTTC------------------CTTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEecChHHHHHHHHHHcCC------------------CCCC
Confidence            66777888888765                       379999999999988876521                  1345


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..+++..|.+++.+|.+++ +.+|+++|+++|+++      +.+|+++   +.+|.+.++++|.++|+
T Consensus        81 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~~i~~l~~  151 (393)
T 1mdo_A           81 EVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLDAIYALGE  151 (393)
T ss_dssp             EEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHHHHHHHHH
T ss_pred             EEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHHHHHHHHH
Confidence            7899999999999998888889999999764 789999999998642      3355543   47899999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccCCCCCcceee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWLMVHFDCTAM  374 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l~~P~~~g~l  374 (375)
                      ++|+++++|+||+.+.....  +. + +.  .|.+++++|  |++..+ .+|++
T Consensus       152 ~~~~~li~D~a~~~g~~~~~--~~-~-~~--~d~~~~S~~k~K~l~~~-~~g~~  198 (393)
T 1mdo_A          152 RYGIPVIEDAAHATGTSYKG--RH-I-GA--RGTAIFSFHAIKNITCA-EGGIV  198 (393)
T ss_dssp             HHTCCBCEECTTCTTCEETT--EE-T-TS--SSEEEEECCTTSSSCSS-SCEEE
T ss_pred             HcCCeEEEECccccCCeECC--ee-c-CC--CCeEEEeCCCCCccccc-cceEE
Confidence            99999999999997543321  11 1 21  699999999  998654 34443

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.57  E-value=7.6e-15  Score=150.70  Aligned_cols=166  Identities=9%  Similarity=-0.048  Sum_probs=106.3

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..+|+.++++++++||.+.                   +.. ..+++++||+||..++.+..+                 
T Consensus        99 ~~lE~~a~~~~a~l~g~~~-------------------~~~~~~v~~~sGt~An~~al~al~~-----------------  142 (490)
T 2a7v_A           99 DEIELLCQRRALEAFDLDP-------------------AQWGVNVQPYSGSPANLAVYTALLQ-----------------  142 (490)
T ss_dssp             THHHHHHHHHHHHHTTCCT-------------------TTEEEECCCSSHHHHHHHHHHHHCC-----------------
T ss_pred             HHHHHHHHHHHHHHcCCCc-------------------ccCceEEeCCchHHHHHHHHHHHcC-----------------
Confidence            5788889999999999982                   111 245677999999999876532                 


Q ss_pred             hcCceEEEecCCCchHHH------H--HHHHcCCeE--EEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC
Q psy1596         239 INSRLVAYCSDQAHSSVE------K--AGLIGLVKM--RYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG  307 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~------k--aa~lg~~~v--~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~  307 (375)
                        +++.|++++..|.+..      .  .+.+.+..+  +.+++| ++|.+|+++|++++++..     |.+|+++  .+.
T Consensus       143 --pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~-----~klIi~~--~s~  213 (490)
T 2a7v_A          143 --PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFR-----PRLIIAG--TSA  213 (490)
T ss_dssp             --SCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHC-----CSEEEEC--CSS
T ss_pred             --CCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcC-----CcEEEEc--CCC
Confidence              4567888888775432      1  233444433  344455 578999999999997532     3355543  445


Q ss_pred             ccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         308 ACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       308 tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .|.+.|+++|++||++||++||+|+||+.+..........+   +.+|.+++++||++..|.| |++
T Consensus       214 ~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~hK~l~Gp~G-G~i  276 (490)
T 2a7v_A          214 YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGARS-GLI  276 (490)
T ss_dssp             CCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCSC-EEE
T ss_pred             CCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCC---CCCCEEEECCcccCccccc-hhe
Confidence            56778999999999999999999999876543221111112   3579999999999988876 554

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.57  E-value=4.1e-14  Score=138.42  Aligned_cols=168  Identities=10%  Similarity=-0.031  Sum_probs=127.6

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |..++++++.+++.+.+|.+.                   +....++|+|||+|+..++.+...                
T Consensus        69 g~~~lr~~ia~~~~~~~g~~~-------------------~~~~v~~t~g~~~al~~~~~~l~~----------------  113 (391)
T 3h14_A           69 GLPALRQRIARLYGEWYGVDL-------------------DPGRVVITPGSSGGFLLAFTALFD----------------  113 (391)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESSHHHHHHHHHHHHCC----------------
T ss_pred             ChHHHHHHHHHHHHHHhCCCC-------------------CHHHEEEecChHHHHHHHHHHhcC----------------
Confidence            566788899999999989773                   345689999999999988776532                


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc--
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN--  313 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp--  313 (375)
                         ++..|+++..+|.++..++...|.+++.+|.+++  +.+|+++|+++   +      +.+|+.+.+++++|.+-+  
T Consensus       114 ---~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~------~~~v~i~~p~nptG~~~~~~  181 (391)
T 3h14_A          114 ---SGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---D------LAGLMVASPANPTGTMLDHA  181 (391)
T ss_dssp             ---TTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---C------CSEEEEESSCTTTCCCCCHH
T ss_pred             ---CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---C------CeEEEECCCCCCCCccCCHH
Confidence               2457889999999999998888889999998753  57899999876   1      447788889999999865  


Q ss_pred             -HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         314 -LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       314 -l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                       +++|+++|++||+++++|++|+....-.. ... ...+...+.+..+++|+++ ....+|.+
T Consensus       182 ~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~  242 (391)
T 3h14_A          182 AMGALIEAAQAQGASFISDEIYHGIEYEAK-AVT-ALELTDECYVINSFSKYFSMTGWRVGWM  242 (391)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCC-GGGTCSSSEEEEESSSTTCCTTSCCEEE
T ss_pred             HHHHHHHHHHHcCCEEEEECcchhcccCCC-CcC-hhhcCCCEEEEEechhccCCccceeEEE
Confidence             89999999999999999999987543111 000 1112234567779999986 44555654

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.56  E-value=4.7e-14  Score=136.41  Aligned_cols=163  Identities=12%  Similarity=0.000  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                     ....++|+|||+++..++.+...                   ++.
T Consensus        70 ~~lr~~la~~~~~~---------------------~~~v~~~~g~t~a~~~~~~~~~~-------------------~gd  109 (363)
T 3ffh_A           70 SSLRKEVADFYQLE---------------------EEELIFTAGVDELIELLTRVLLD-------------------TTT  109 (363)
T ss_dssp             HHHHHHHHHHHTCC---------------------GGGEEEESSHHHHHHHHHHHHCS-------------------TTC
T ss_pred             HHHHHHHHHHhCCC---------------------hhhEEEeCCHHHHHHHHHHHHcc-------------------CCC
Confidence            67788888988875                     13589999999999988876421                   234


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..+|.++...+...|.+++.+|.++++.+|+++|+++++++      +.+|+.+.+++++|.+-|+++|.++++.
T Consensus       110 ~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~  183 (363)
T 3ffh_A          110 NTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYIELADIQAFLDR  183 (363)
T ss_dssp             EEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTT
T ss_pred             EEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence            7889999999999998888889999999888999999999998643      4578888899999999999999999988


Q ss_pred             c--CCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         324 E--GLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       324 ~--~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +  |+++++|++|+.+.. ..  ...... ....-+.+..+++|+++.| ..+|.+
T Consensus       184 ~~~~~~li~De~~~~~~~-~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~G~r~G~~  237 (363)
T 3ffh_A          184 VPSDVLVVLDEAYIEYVT-PQPEKHEKLV-RTYKNLIITRTFSKIYGLASARVGYG  237 (363)
T ss_dssp             SCTTSEEEEECTTGGGCS-SCCCCCGGGG-GTCTTEEEEEESSSTTCCSSCCCEEE
T ss_pred             CCCCcEEEEeCchHhhcC-ccccCHHHHh-hcCCCEEEEeechhhhcCchhceeee
Confidence            7  999999999996543 10  000111 1112246678899988633 334654

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.56  E-value=2.2e-14  Score=138.46  Aligned_cols=158  Identities=12%  Similarity=0.030  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       ..++++|||+|+..++.+.....                 .+.
T Consensus        50 ~~l~~~la~~~~~~-----------------------~~i~~~~G~~a~~~al~~~~~~g-----------------d~~   89 (357)
T 3lws_A           50 EPFEQKFADVLGMD-----------------------DAVFFPSGTMAQQVALRIWSDET-----------------DNR   89 (357)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHHHHHH-----------------TCC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEecCcHHHHHHHHHHHhhcC-----------------CCc
Confidence            67888999999876                       25888999999998887765421                 112


Q ss_pred             EEEecCCCchHHHHH---HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-cccc---cHHH
Q psy1596         244 VAYCSDQAHSSVEKA---GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-CAFD---NLEE  316 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka---a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-GavD---pl~e  316 (375)
                      +|+++...|++..+.   +.+.+.+++.||. +++.+|+++|+++.  +      +.+|+++.+++++ |.+-   ++++
T Consensus        90 ~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~~--~------~~~v~~~~p~np~~G~~~~~~~l~~  160 (357)
T 3lws_A           90 TVAYHPLCHLEIHEQDGLKELHPIETILVGA-ADRLMTLDEIKALP--D------IACLLLELPQREIGGVAPAFSELET  160 (357)
T ss_dssp             EEEECTTCHHHHSSTTHHHHHSSCEEEECSC-TTSCCCHHHHHTCC--S------CSEEEEESSBGGGTSBCCCHHHHHH
T ss_pred             EEEecccceeeeeccchhhhccCcEEEEecC-CCCCcCHHHHhcCc--C------cceEEEEcccccCCceeCCHHHHHH
Confidence            788899999887763   3567888888885 56789999998872  1      3367777788777 8764   6999


Q ss_pred             HHHHHHhcCCEEEEecccccCcc--cchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSF--ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~--~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++|++||+|+|+|+||+....  .........   +.+|.++.++||+++.|.+ |++
T Consensus       161 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~  216 (357)
T 3lws_A          161 ISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYKGLGGIAG-AIL  216 (357)
T ss_dssp             HHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSSTTCCSSC-EEE
T ss_pred             HHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccccCCCCce-EEE
Confidence            99999999999999999873211  111112222   3469999999999978887 654

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.56  E-value=2.7e-14  Score=141.15  Aligned_cols=151  Identities=15%  Similarity=0.093  Sum_probs=121.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       ..+++++||+|+..++.+...                   ++.
T Consensus        62 ~~l~~~la~~~g~~-----------------------~~i~~~sG~~ai~~~~~~~~~-------------------~gd   99 (389)
T 3acz_A           62 EQFEEMVCSIEGAA-----------------------GSAAFGSGMGAISSSTLAFLQ-------------------KGD   99 (389)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHTTTCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence            78889999998865                       368899999999888765421                   245


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++.+|.+....+    ...|.+++.++.     .|+++|+++|+++      +.+|+++.+++++|.+.|+++|++
T Consensus       100 ~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~  168 (389)
T 3acz_A          100 HLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT-----SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAV  168 (389)
T ss_dssp             EEEEESSCCHHHHHHHHHHHHHTTCEEEEECT-----TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHHcCCEEEEECC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHH
Confidence            7889999999987764    456788888886     3899999988653      447888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|+++|+++++|++|+.+....|-     .  ..+|.++.++||+++.|.+  +|++
T Consensus       169 ~~~~~~~~livD~~~~~~~~~~~~-----~--~~~di~~~S~sK~~~~~~~~~~G~v  218 (389)
T 3acz_A          169 VCHERGARLVVDATFTSPCFLKPL-----E--LGADIALHSVSKYINGHGDVIGGVS  218 (389)
T ss_dssp             HHHHHTCEEEEECTTTCTTTCCGG-----G--TTCSEEEEETTTTTTCSSCCCCEEE
T ss_pred             HHHHcCCEEEEECCCccccccCcc-----c--cCCeEEEECChhhccCCCCceeEEE
Confidence            999999999999999887542221     1  1479999999999999987  6765

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.56  E-value=4.5e-14  Score=141.20  Aligned_cols=147  Identities=12%  Similarity=0.080  Sum_probs=117.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++||+|+..++.+...                   ++.
T Consensus        61 ~~l~~~la~~~g~~-----------------------~~v~~~sGt~A~~~~l~~~~~-------------------~gd   98 (421)
T 2ctz_A           61 DVLEKRLAALEGGK-----------------------AALATASGHAAQFLALTTLAQ-------------------AGD   98 (421)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------ceEEecCHHHHHHHHHHHHhC-------------------CCC
Confidence            67888899998865                       247888889999988876521                   345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEE-ecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYI-ESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~V-p~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      .|+++..+|.+...++    ...|.+++.+ +.+     |+++|+++|++.      +.+|+++..++++|.+.|+++|+
T Consensus        99 ~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~  167 (421)
T 2ctz_A           99 NIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-----RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALA  167 (421)
T ss_dssp             EEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-----CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHH
Confidence            7999999999998876    4567888888 654     899999998653      45788899999999999999999


Q ss_pred             HHHHhcCCEEEEeccc-ccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         319 PICEKEGLWLHVDAAY-AGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~-gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      ++|+++|+++++|++| +.+....+    .-.   .+|.+++++||+++.|.+
T Consensus       168 ~~a~~~g~~livD~~~~~~g~~~~~----~~~---~~Di~~~s~~K~l~~~g~  213 (421)
T 2ctz_A          168 QAAREKGVALIVDNTFGMGGYLLRP----LAW---GAALVTHSLTKWVGGHGA  213 (421)
T ss_dssp             HHHHHHTCEEEEECGGGGGGTSCCG----GGG---TCSEEEEETTTTTTCSSC
T ss_pred             HHHHHcCCEEEEECCcccccccCCc----ccc---CCeEEEECCcccccCCCC
Confidence            9999999999999999 76532111    111   379999999999998764

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.56  E-value=2.2e-14  Score=141.72  Aligned_cols=173  Identities=10%  Similarity=0.027  Sum_probs=127.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++.+.+|+.+.+|.+.                   ++ ...++|+|||+++..++.+...              
T Consensus        75 ~g~~~l~~~ia~~~~~~~g~~~-------------------~~~~~v~~t~g~~~a~~~~~~~~~~--------------  121 (412)
T 2x5d_A           75 RGIPRLRRAISHWYRDRYDVQI-------------------DPESEAIVTIGSKEGLAHLMLATLD--------------  121 (412)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCC-------------------CTTTSEEEESCHHHHHHHHHHHHCC--------------
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CCCcCEEEcCChHHHHHHHHHHhCC--------------
Confidence            4566777888888888889763                   23 4689999999999988876421              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc-
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD-  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD-  312 (375)
                           ++..|+++..+|.++..++...|.+++.+|.+++  +.+|+++|++++++.      +.+|+++.+++++|.+- 
T Consensus       122 -----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~~~~  190 (412)
T 2x5d_A          122 -----HGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQCVE  190 (412)
T ss_dssp             -----TTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCCCCC
T ss_pred             -----CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCCcCC
Confidence                 2357889999999999998877889999998754  347889998887532      34666778899999874 


Q ss_pred             --cHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         313 --NLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       313 --pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                        ++++|+++|++||+++++|++|+.+..-..   .+.. +.+....|.++.++||+++.| +.+|++
T Consensus       191 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (412)
T 2x5d_A          191 LDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ-VPGAKDIAVEFFTLSKSYNMAGWRIGFM  257 (412)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG-STTGGGTEEEEEECC-CCSCTTSCCEEE
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhh-ccCccCcEEEEecCccccCCcccceEEE
Confidence              588999999999999999999998653111   1111 111124588899999998633 346654

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.56  E-value=9.2e-14  Score=136.37  Aligned_cols=151  Identities=11%  Similarity=0.069  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++||+|+..++.++..                   ++.
T Consensus        55 ~~l~~~la~~~~~~-----------------------~~i~~~sGt~a~~~~~~~~~~-------------------~g~   92 (386)
T 1cs1_A           55 DVVQRALAELEGGA-----------------------GAVLTNTGMSAIHLVTTVFLK-------------------PGD   92 (386)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence            66778888888765                       246677789999988876521                   234


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++..+|.++..+.    ...+.+++.++.+     |+++|+++|+++      +.+|+++.+++++|.+.|+++|++
T Consensus        93 ~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~  161 (386)
T 1cs1_A           93 LLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG-----DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICH  161 (386)
T ss_dssp             EEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT-----CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHH
T ss_pred             EEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCC-----CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHH
Confidence            7889999999877654    3456788888864     899999999753      447888899999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc--eee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC--TAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~--g~l  374 (375)
                      +|+++|+++++|++|+++....+.    ..   .+|.++.++||+++.|.+.  |++
T Consensus       162 l~~~~~~~li~De~~~~~~~~~~~----~~---~~di~~~s~sK~~~~~~~~~~G~~  211 (386)
T 1cs1_A          162 LAREVGAVSVVDNTFLSPALQNPL----AL---GADLVLHSCTKYLNGHSDVVAGVV  211 (386)
T ss_dssp             HHHHTTCEEEEECTTTCTTTCCGG----GG---TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred             HHHHcCCEEEEECCCcccccCCcc----cc---CceEEEEcCcccccCCCCceeEEE
Confidence            999999999999999988653321    11   3699999999999988873  765

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.56  E-value=2.2e-14  Score=140.48  Aligned_cols=172  Identities=10%  Similarity=-0.041  Sum_probs=127.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..++++.+.+|+++.+|++.                   +....++|+|||+++..++.+...                 
T Consensus        68 ~~~l~~~la~~l~~~~g~~~-------------------~~~~v~~t~g~~~a~~~~~~~l~~-----------------  111 (399)
T 1c7n_A           68 TEEYKKTVKKWMKDRHQWDI-------------------QTDWIINTAGVVPAVFNAVREFTK-----------------  111 (399)
T ss_dssp             CHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESSHHHHHHHHHHHHCC-----------------
T ss_pred             cHHHHHHHHHHHHHHhCCCC-------------------ChhhEEEcCCHHHHHHHHHHHhcC-----------------
Confidence            45677888888888888653                   234689999999999888876432                 


Q ss_pred             hcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc--
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN--  313 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp--  313 (375)
                        ++..|+++..+|.++..++...|.+++.+|.+ ++  +.+|+++|+++|++.     .+.+|+.+.+++++|.+-+  
T Consensus       112 --~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~  184 (399)
T 1c7n_A          112 --PGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVWKKD  184 (399)
T ss_dssp             --TTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBCCCHH
T ss_pred             --CCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcCcCHH
Confidence              23578899999999999988878899999875 33  469999999999632     1446777889999999977  


Q ss_pred             -HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC----CcccEEEEcCcccCCCC-Ccceee
Q psy1596         314 -LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV----EYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       314 -l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi----e~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                       +++|+++|++||+++++|++|+.+..-...... +..+    ...+.+..++||+++.| +.+|.+
T Consensus       185 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  250 (399)
T 1c7n_A          185 ELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNI  250 (399)
T ss_dssp             HHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred             HHHHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEE
Confidence             999999999999999999999985421100000 1111    12356788999998744 335654

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.56  E-value=5.9e-14  Score=138.60  Aligned_cols=159  Identities=14%  Similarity=0.053  Sum_probs=119.3

Q ss_pred             HHHHHHH-HHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFV-SKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wL-a~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      .++.+.+ ++++|..                      ...++|+|||+|+..++.+..-                  .++
T Consensus        39 ~~l~~~~~a~~~g~~----------------------~~~v~~~sgt~al~~al~~l~~------------------~~G   78 (377)
T 3ju7_A           39 QRFEQTIMSGFFQNR----------------------GAVTTVANATLGLMAAIQLKKR------------------KKG   78 (377)
T ss_dssp             HHHHHHHHHHTSTTC----------------------SEEEEESCHHHHHHHHHHHHSC------------------TTC
T ss_pred             HHHHHHHHHHHhCCC----------------------CeEEEeCCHHHHHHHHHHHcCC------------------CCc
Confidence            6677778 9988832                      2479999999999988876411                  135


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      ..|+++..+|.++..++...|.+++.++++ +++.+|+++|+++|.....   .+.+|+   .++.+|.+.|+++|.++|
T Consensus        79 d~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~---~tk~v~---~~~~~G~~~~~~~i~~la  152 (377)
T 3ju7_A           79 KYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKE---EVAIVV---PYATFGSWMNLEEYEELE  152 (377)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGG---GEEEEC---CBCGGGBCCCCHHHHHHH
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCC---CceEEE---EECCCCCccCHHHHHHHH
Confidence            689999999999999998888999999997 6789999999999943211   123444   456789999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhh-cCCCcccEEEEcCcccCCCCCccee
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWL-AGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~-~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      + +|+++|+|+||+.+.....  +. + ..+..++.+++++||++..+ ..|+
T Consensus       153 ~-~~~~vi~D~a~a~g~~~~~--~~-~g~~~~d~~~~S~~~~K~l~~g-~gG~  200 (377)
T 3ju7_A          153 K-KGVPVVVDAAPGFGLMNGG--MH-YGQDFSGMIIYSFHATKPFGIG-EGGL  200 (377)
T ss_dssp             H-TTCCBEEECTTCTTCEETT--EE-TTTTCSSEEEEECBTTSSSCCB-SCEE
T ss_pred             h-cCCEEEEECCCccCCeECC--Ee-ccCCCCcEEEEECCCCCcCCCC-CcEE
Confidence            9 9999999999987754321  11 1 11234677777889999864 4444

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.56  E-value=5.4e-14  Score=136.52  Aligned_cols=166  Identities=9%  Similarity=-0.029  Sum_probs=127.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .+..++++++.+|+.+.+|++.                   ++...++|+|||+++..++.+...               
T Consensus        66 ~~~~~l~~~la~~~~~~~g~~~-------------------~~~~v~~~~g~~~a~~~~~~~~~~---------------  111 (370)
T 2z61_A           66 RGILELREKISELYKDKYKADI-------------------IPDNIIITGGSSLGLFFALSSIID---------------  111 (370)
T ss_dssp             TCCHHHHHHHHHHHHHHSSCCC-------------------CGGGEEEESSHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------ChhhEEECCChHHHHHHHHHHhcC---------------
Confidence            4567788899999998888763                   334689999999999988876532               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                          ++..|++++.+|.++..++...|.+++.+|      +|+++|++++++.      +.+|+.+.+++++|.+-|++ 
T Consensus       112 ----~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~-  174 (370)
T 2z61_A          112 ----DGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALSDK------TKAIIINSPSNPLGEVIDRE-  174 (370)
T ss_dssp             ----TTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCCSS------EEEEEEESSCTTTCCCCCHH-
T ss_pred             ----CCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcccC------ceEEEEcCCCCCcCcccCHH-
Confidence                235789999999999999888888888887      7999999988642      44677788999999999999 


Q ss_pred             HHHHHHhcCCEEEEecccccCcccc--hhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFIC--PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~--~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      |.++|+++|+++++|++|+.+..-.  +.+.. +.+....|.+..++||+++.| +.+|++
T Consensus       175 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~  234 (370)
T 2z61_A          175 IYEFAYENIPYIISDEIYNGLVYEGKCYSAIE-FDENLEKTILINGFSKLYAMTGWRIGYV  234 (370)
T ss_dssp             HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGG-TCTTCSSEEEEEESTTTTTCGGGCCEEE
T ss_pred             HHHHHHHcCCEEEEEcchhhcccCCCCcCHHH-ccCCCCcEEEEecChhccCCccceEEEE
Confidence            9999999999999999999864311  11111 112235689999999998633 225654

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.56  E-value=2.1e-14  Score=137.33  Aligned_cols=150  Identities=9%  Similarity=0.015  Sum_probs=117.3

Q ss_pred             HHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceE
Q psy1596         165 KVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV  244 (375)
Q Consensus       165 ~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~v  244 (375)
                      ++.+.+++++|.+                       ..+++++||+|+..++.+...                   ++..
T Consensus         2 ~l~~~la~~~g~~-----------------------~~i~~~sG~~a~~~~~~~~~~-------------------~g~~   39 (331)
T 1pff_A            2 ALEGKIAKLEHAE-----------------------ACAATASGMGAIAASVWTFLK-------------------AGDH   39 (331)
T ss_dssp             HHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTCE
T ss_pred             hHHHHHHHHhCCC-----------------------eEEEeCChHHHHHHHHHHhcC-------------------CCCE
Confidence            3566788888765                       357888889999888775421                   2357


Q ss_pred             EEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         245 AYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       245 V~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      |+++..+|.++..++.    ..+.+++.++.     +|+++|+++|+++      +.+|+.+.+++++|.+.|+++|.++
T Consensus        40 v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~  108 (331)
T 1pff_A           40 LISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQ  108 (331)
T ss_dssp             EEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             EEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHH
Confidence            8899999999887753    36778888876     4788998888642      4578889999999999999999999


Q ss_pred             HHh-cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         321 CEK-EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       321 a~~-~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      |++ +|+++++|+||+.+....+.    ..   .+|.++.++||+++.|.+  +|++
T Consensus       109 ~~~~~~~~li~D~a~~~~~~~~~~----~~---~~d~~~~s~~K~~~~~~~r~~G~~  158 (331)
T 1pff_A          109 ARKQKDILVIVDNTFASPILTNPL----DL---GVDIVVHSATKYINGHTDVVAGLV  158 (331)
T ss_dssp             HTTSSSCEEEEECTTTHHHHCCGG----GG---TCSEEEEETTTTTSSSSSCCCEEE
T ss_pred             HhhhcCCEEEEECCCcccccCChh----hc---CCcEEEEECccccCCCCCceEEEE
Confidence            999 99999999999876543221    11   369999999999998877  6665

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.55  E-value=3.2e-14  Score=139.13  Aligned_cols=171  Identities=9%  Similarity=-0.025  Sum_probs=126.0

Q ss_pred             hhH-HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         159 RDK-YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       159 ~~~-le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      ..+ +++++.+|+.+.+|++.                   +....++|+|||+++..++.+...                
T Consensus        65 ~~~~lr~~la~~l~~~~g~~~-------------------~~~~v~~t~g~~~al~~~~~~l~~----------------  109 (390)
T 1d2f_A           65 KNDEFLAAIAHWFSTQHYTAI-------------------DSQTVVYGPSVIYMVSELIRQWSE----------------  109 (390)
T ss_dssp             CCHHHHHHHHHHHHHHSCCCC-------------------CGGGEEEESCHHHHHHHHHHHSSC----------------
T ss_pred             ChHHHHHHHHHHHHHhcCCCC-------------------CHHHEEEcCCHHHHHHHHHHHhcC----------------
Confidence            345 77888999998888653                   234689999999999888776432                


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC---CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK---LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-  313 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~---g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-  313 (375)
                         ++..|++...+|.++..++...+.+++.+|.+.+   +.+|+++|+++|++.     .+.+|+++.+++++|.+-+ 
T Consensus       110 ---~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~  181 (390)
T 1d2f_A          110 ---TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKVWTC  181 (390)
T ss_dssp             ---TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCCCCT
T ss_pred             ---CCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCCcCcCH
Confidence               2357889999999999998888889999998643   369999999998642     2456777889999999854 


Q ss_pred             --HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC-c-ccEEEEcCcccCCCC-Ccceee
Q psy1596         314 --LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-Y-ANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       314 --l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-~-aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                        +++|+++|+++|+++++|++|+.+..-...+.. +.++. . .|. ..++||+++.| +.+|.+
T Consensus       182 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~  245 (390)
T 1d2f_A          182 DELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWAL-LTSGSKSFNIPALTGAYG  245 (390)
T ss_dssp             THHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEE-EECSHHHHTCGGGCCEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCCCCCcC-HHHcchhhHhh-ccCccHhhcccChhheEE
Confidence              999999999999999999999986431111101 11221 1 266 99999998633 345654

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.55  E-value=4.2e-14  Score=141.70  Aligned_cols=170  Identities=14%  Similarity=0.085  Sum_probs=109.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc-
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR-  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~-  242 (375)
                      .++.+++++++|.+                       .++||+|||+||..|+.+++.......+           .++ 
T Consensus        77 ~~l~~~la~~~~~~-----------------------~v~~t~~gt~A~~~al~~~~~~~~~~~G-----------~~~~  122 (467)
T 2oqx_A           77 YALAESVKNIFGYQ-----------------------YTIPTHQGRGAEQIYIPVLIKKREQEKG-----------LDRS  122 (467)
T ss_dssp             HHHHHHHHHHHCCS-----------------------EEEEEC--CCSHHHHHHHHHHHHHHHHC-----------CCTT
T ss_pred             HHHHHHHHHHhCcC-----------------------cEEEcCCcHHHHHHHHHHHhccccccCC-----------CCcc
Confidence            56778888888765                       4799999999999999988753111000           001 


Q ss_pred             eEEEecCCCchHHHHHH-HHcCCeEEEE------ecC----CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-cc
Q psy1596         243 LVAYCSDQAHSSVEKAG-LIGLVKMRYI------ESD----DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-CA  310 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa-~lg~~~v~~V------p~d----~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-Ga  310 (375)
                      ..|+++ ..|+....+. ...+..++..      +.+    .++.+|+++|+++|++..  ...+.+|+.+.+++++ |.
T Consensus       123 d~Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~  199 (467)
T 2oqx_A          123 KMVAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQ  199 (467)
T ss_dssp             TCEEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCB
T ss_pred             ceEEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCc
Confidence            235566 6786554443 4555554433      222    357899999999998631  0124467777777776 65


Q ss_pred             c---ccHHHHHHHHHhcCCEEEEeccccc-Cccc--------ch-hhhhhh-cCCCcccEEEEcCcccCCCCCc
Q psy1596         311 F---DNLEELGPICEKEGLWLHVDAAYAG-SSFI--------CP-EFRKWL-AGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       311 v---Dpl~eI~~ia~~~~iwlHVDaA~gg-~~~~--------~~-~~~~~~-~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +   +++++|+++|++||+|||+|+|++. ++..        .. ...... ...+.+|.+++++||+++.|.|
T Consensus       200 ~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G  273 (467)
T 2oqx_A          200 PVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG  273 (467)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc
Confidence            4   7899999999999999999987765 3210        00 011110 0013468999999999998866

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.55  E-value=3.7e-14  Score=140.94  Aligned_cols=177  Identities=12%  Similarity=-0.009  Sum_probs=127.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++++.+|+.+.+|++ .                   +....++|+|||+++..++.+...              
T Consensus        85 ~g~~~lr~~la~~l~~~~g~~~~-------------------~~~~v~~t~G~~~al~~~~~~l~~--------------  131 (425)
T 1vp4_A           85 EGDPVLKQQILKLLERMYGITGL-------------------DEDNLIFTVGSQQALDLIGKLFLD--------------  131 (425)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCSC-------------------CGGGEEEEEHHHHHHHHHHHHHCC--------------
T ss_pred             CCCHHHHHHHHHHHHhccCCCCC-------------------CcccEEEeccHHHHHHHHHHHhCC--------------
Confidence            356677788888887777864 3                   234689999999999888775422              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhc--CCccEEE-EEEcCCCCccccc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKK--HLIPFFV-CGTLGTTGACAFD  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~--g~~p~~V-v~t~GtT~tGavD  312 (375)
                           ++..|++.+.+|.++..++...|.+++.+|.++++ +|+++|+++|++..++  +..+.+| +.+.++++||.+-
T Consensus       132 -----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~  205 (425)
T 1vp4_A          132 -----DESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTT  205 (425)
T ss_dssp             -----TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCC
T ss_pred             -----CCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcC
Confidence                 23578899999999999988888899999987765 9999999999863211  1124455 5677889999884


Q ss_pred             ---cHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         313 ---NLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       313 ---pl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                         ++++|+++|+++|+++++|++|+.+..-.   +.+... . ....+.+..+++|+++..+.+|++
T Consensus       206 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~-~~~~~i~~~s~sK~~~~G~r~G~~  271 (425)
T 1vp4_A          206 SLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKI-G-GPERVVLLNTFSKVLAPGLRIGMV  271 (425)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHH-H-CTTTEEEEEESTTTTCGGGCEEEE
T ss_pred             CHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHh-C-CCCCEEEEeccccccccccceEEE
Confidence               57889999999999999999998854311   112221 1 122467788999998822335654

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.55  E-value=2.5e-14  Score=140.57  Aligned_cols=165  Identities=12%  Similarity=0.047  Sum_probs=112.5

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      ....+++.+.+++++++|.+.                      .-+++++||+|+..++.+...                
T Consensus        68 ~~~~~~~~~~~~la~~~g~~~----------------------~~i~~~sGt~a~~~~~~~~~~----------------  109 (417)
T 3n0l_A           68 FVDEIETLAIERCKKLFNCKF----------------------ANVQPNSGSQANQGVYAALIN----------------  109 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSE----------------------EECCCSSHHHHHHHHHHHHSC----------------
T ss_pred             HHHHHHHHHHHHHHHHhCCCC----------------------cceEeccHHHHHHHHHHHhcC----------------
Confidence            345666788889999999861                      235566779999988876532                


Q ss_pred             hhcCceEEEecCCCchHHHHH---HHHc--CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         238 EINSRLVAYCSDQAHSSVEKA---GLIG--LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~ka---a~lg--~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                         ++..|+++..+|.++...   ....  +..++.+++++++.+|+++|+++|++..     +.+|+.+.++  .|.+.
T Consensus       110 ---~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~G~~~  179 (417)
T 3n0l_A          110 ---PGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEK-----PKLIVCGASA--YARVI  179 (417)
T ss_dssp             ---TTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHC-----CSEEEECCSS--CCSCC
T ss_pred             ---CCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcC-----CeEEEECCcc--cCccC
Confidence               345788999999877652   2232  3456777788889999999999998431     3366666655  49999


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++++|.++|++||+++++|++|+.+........   ..+..+|.++.++||++..|.+ |++
T Consensus       180 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~l~g~~~-G~~  237 (417)
T 3n0l_A          180 DFAKFREIADEIGAYLFADIAHIAGLVVAGEHP---SPFPYAHVVSSTTHKTLRGPRG-GII  237 (417)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC---CCTTTCSEEEEESSTTTCSCSC-EEE
T ss_pred             CHHHHHHHHHHcCCEEEEECccchhhhhcccCC---CccccceEEEeeCccccCCCCe-eEE
Confidence            999999999999999999999865543221111   1223579999999999977764 554

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.55  E-value=4.4e-14  Score=139.24  Aligned_cols=155  Identities=14%  Similarity=-0.016  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++||+|+..++.+++.                  .++.
T Consensus        66 ~~l~~~la~~~~~~-----------------------~~v~~~~Gt~a~~~~l~~~~~------------------~~gd  104 (399)
T 2oga_A           66 EGFEAEFAAYCETD-----------------------HAVGVNSGMDALQLALRGLGI------------------GPGD  104 (399)
T ss_dssp             HHHHHHHHHHTTSS-----------------------EEEEESCHHHHHHHHHHHTTC------------------CTTC
T ss_pred             HHHHHHHHHHHCCC-----------------------eEEEecCHHHHHHHHHHHhCC------------------CCcC
Confidence            66778888888765                       369999999999888876521                  1245


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..++...|.+++.+|.++ ++.+|+++|+++|++.      +.+|+   .++++|.+.|+++|.++|+
T Consensus       105 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~l~~  175 (399)
T 2oga_A          105 EVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPR------TRALL---PVHLYGHPADMDALRELAD  175 (399)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHH
T ss_pred             EEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCC------CeEEE---EeCCcCCccCHHHHHHHHH
Confidence            788999999999999888888999999876 5889999999998642      33444   3578999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccCCCCCccee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWLMVHFDCTA  373 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l~~P~~~g~  373 (375)
                      ++|+++++|++|+.+.....  +. + + ...|.+++++|  |+++.|-.+|+
T Consensus       176 ~~~~~li~Dea~~~g~~~~~--~~-~-~-~~~di~~~S~~~sK~~~~~G~~g~  223 (399)
T 2oga_A          176 RHGLHIVEDAAQAHGARYRG--RR-I-G-AGSSVAAFSFYPGKNLGCFGDGGA  223 (399)
T ss_dssp             HHTCEECEECTTCTTCEETT--EE-T-T-CTTCEEEEECCTTSSSCCSSCCEE
T ss_pred             HcCCEEEEECcccccCccCC--ee-c-c-cccCEEEEeCCCCccCCcCCceEE
Confidence            99999999999987644321  11 1 1 12589999985  99876433444

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.55  E-value=3.9e-14  Score=141.74  Aligned_cols=162  Identities=12%  Similarity=0.030  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++|+|||+|+..++.++..                   ++.
T Consensus        78 ~~l~~~la~~~~~~-----------------------~~~~~~~gt~a~~~al~~l~~-------------------~gd  115 (456)
T 2ez2_A           78 YHLERTVQELFGFK-----------------------HIVPTHQGRGAENLLSQLAIK-------------------PGQ  115 (456)
T ss_dssp             HHHHHHHHHHHCCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCcHHHHHHHHHHhCC-------------------CCC
Confidence            56677788888765                       479999999999988876532                   233


Q ss_pred             EEEecCCCc-hHHHHHHHHcCCeEEEEecCC----------CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCC-Ccccc
Q psy1596         244 VAYCSDQAH-SSVEKAGLIGLVKMRYIESDD----------KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT-GACAF  311 (375)
Q Consensus       244 vV~~S~~aH-~Sv~kaa~lg~~~v~~Vp~d~----------~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT-~tGav  311 (375)
                        +++..+| .++..++...|.+++.+++++          ++.+|+++|+++|++.+.  ..+.+|+.+.+++ .+|.+
T Consensus       116 --i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~  191 (456)
T 2ez2_A          116 --YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQP  191 (456)
T ss_dssp             --EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBC
T ss_pred             --EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCcc
Confidence              5667788 887888888888999998863          278999999999986541  1234677776776 88977


Q ss_pred             c---cHHHHHHHHHhcCCEEEEecccccC---------cccchh-hhh---hhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         312 D---NLEELGPICEKEGLWLHVDAAYAGS---------SFICPE-FRK---WLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       312 D---pl~eI~~ia~~~~iwlHVDaA~gg~---------~~~~~~-~~~---~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      -   ++++|+++|++||+|+|+|++|+.+         ..+... ...   .. + ..+|.+++++||+++.| -.|++
T Consensus       192 ~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~d~~~~S~kk~~~~~-~gG~~  267 (456)
T 2ez2_A          192 VSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEM-F-SYADGCTMSGKKDCLVN-IGGFL  267 (456)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHH-H-TTCSEEEEETTTTTCCS-SCEEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhh-c-ccCCEEEEeCcccCCCC-ceeEE
Confidence            4   4999999999999999999999874         111111 000   01 1 23699999999998766 35554

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.54  E-value=3.3e-14  Score=138.35  Aligned_cols=173  Identities=17%  Similarity=0.068  Sum_probs=127.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .+..++++.+.+|+.+.+|.+.                   ++. ..++|+|||+++..++.+..+              
T Consensus        63 ~~~~~l~~~ia~~~~~~~g~~~-------------------~~~~~v~~~~g~~~a~~~~~~~l~~--------------  109 (376)
T 2dou_A           63 SCTLPFLEEAARWYEGRYGVGL-------------------DPRREALALIGSQEGLAHLLLALTE--------------  109 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCC-------------------CTTTSEEEESSHHHHHHHHHHHHCC--------------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCCccEEEcCCcHHHHHHHHHHhcC--------------
Confidence            3566777888888888889863                   223 689999999999888766432              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---  312 (375)
                           ++..|++.+.+|.++..++...|.+++.+|.++++.+|+++|+++|++.      +.+|+++.+++++|.+-   
T Consensus       110 -----~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~  178 (376)
T 2dou_A          110 -----PEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWRE------AKVLLLNYPNNPTGAVADWG  178 (376)
T ss_dssp             -----TTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCHH
T ss_pred             -----CCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccC------ceEEEECCCCCCcCccCCHH
Confidence                 2357889999999999998888889999998555679999999999643      44777778899999884   


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc--CCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA--GVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~--gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      ++++|+++|+++|+++++|++|+.+..-. .....+.  +....+.+..++||+++.| +.+|++
T Consensus       179 ~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  242 (376)
T 2dou_A          179 YFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFA  242 (376)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEE
T ss_pred             HHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhheeEEE
Confidence            47899999999999999999998764211 0000111  1112467788999998643 345654

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.54  E-value=1.1e-14  Score=142.66  Aligned_cols=164  Identities=10%  Similarity=0.040  Sum_probs=116.3

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ...+++.+++++++++|.+.                      .-+++++||+|+..++.++..                 
T Consensus        67 ~~~l~~~~r~~la~~~g~~~----------------------~~i~~~sGt~a~~~a~~~~~~-----------------  107 (405)
T 2vi8_A           67 VDIVEELARERAKQLFGAEH----------------------ANVQPHSGAQANMAVYFTVLE-----------------  107 (405)
T ss_dssp             HHHHHHHHHHHHHHHHTCSE----------------------EECCCSSHHHHHHHHHHHHCC-----------------
T ss_pred             HHHHHHHHHHHHHHHhCCCc----------------------eEEEecCcHHHHHHHHHHhcC-----------------
Confidence            34566678899999999861                      235567779999988877632                 


Q ss_pred             hcCceEEEecCCCchHHHH-HH--HHcC--CeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         239 INSRLVAYCSDQAHSSVEK-AG--LIGL--VKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~k-aa--~lg~--~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                        ++..|+++..+|.++.. ++  .+.+  .+++.++++ +++.+|+++|+++|++..     +.+|+++ + +..|...
T Consensus       108 --~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~-~-~~~~~~~  178 (405)
T 2vi8_A          108 --HGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHR-----PKLIVAA-A-AAYPRII  178 (405)
T ss_dssp             --TTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC-----CSEEEEC-C-SSCCSCC
T ss_pred             --CCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcC-----CeEEEEe-C-CCCCccC
Confidence              23578888889987754 21  1222  367777775 678899999999997631     2245442 2 4457777


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++++|.++|+++|+++++|++|+.+...... .  ..+++.+|.++.++||+++.|.| |++
T Consensus       179 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~--~~~~~~~di~~~s~sK~~~g~~g-G~~  236 (405)
T 2vi8_A          179 DFAKFREIADEVGAYLMVDMAHIAGLVAAGL-H--PNPVPYAHFVTTTTHKTLRGPRG-GMI  236 (405)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS-S--CCSTTTCSEEEEESSSTTCCCSC-EEE
T ss_pred             CHHHHHHHHHHcCCEEEEEccccccccccCc-C--CCccccCCEEEEeccccCCCCCC-eEE
Confidence            8999999999999999999999854322111 1  11234679999999999987888 765

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.54  E-value=7.2e-14  Score=135.19  Aligned_cols=162  Identities=11%  Similarity=-0.065  Sum_probs=122.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++++++++|.+.                     ...++|+|||+++..++.+...                   ++.
T Consensus        68 ~~lr~~la~~~~~~~---------------------~~v~~~~g~~~a~~~~~~~l~~-------------------~gd  107 (365)
T 3get_A           68 IELKSTLAQKYKVQN---------------------ENIIIGAGSDQVIEFAIHSKLN-------------------SKN  107 (365)
T ss_dssp             HHHHHHHHHHHTCCG---------------------GGEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCCc---------------------ceEEECCCHHHHHHHHHHHHhC-------------------CCC
Confidence            467788888888751                     3589999999999888765422                   245


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEec-CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIES-DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..+++..|.+++.+|. ++++ +|+++|+++++++      +.+|+++.+++++|.+-|+++|.++++
T Consensus       108 ~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~  180 (365)
T 3get_A          108 AFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECLDASEATEFIK  180 (365)
T ss_dssp             EEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             EEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCcCHHHHHHHHH
Confidence            7889999999999998888889999998 6778 9999999998633      457778889999999988888888887


Q ss_pred             --hcCCEEEEecccccCcc--c----chhhhhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         323 --KEGLWLHVDAAYAGSSF--I----CPEFRKWLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       323 --~~~iwlHVDaA~gg~~~--~----~~~~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                        ++|+++++|++|+.+..  .    .+... ... ....+.+..++||+++ .....|.+
T Consensus       181 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~-~~~~~i~~~s~sK~~~~~G~r~G~~  239 (365)
T 3get_A          181 GVNEDCLVVIDAAYNEFASFKDSKKHLEPCE-LIK-EFDNVLYLGTFSKLYGLGGLRIGYG  239 (365)
T ss_dssp             TSCTTSEEEEECTTHHHHHHHCGGGCCCHHH-HHH-HCTTEEEEEESSSTTSCTTTCCEEE
T ss_pred             hCCCCcEEEEeCccHHHhcccCCcccccHhH-Hhc-cCCCEEEEeecchHhcCcchheEEE
Confidence              77999999999985432  1    11111 111 1124678889999986 34456654

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.54  E-value=1.6e-14  Score=144.96  Aligned_cols=174  Identities=14%  Similarity=0.095  Sum_probs=130.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+.+|.+.                   ++...++|+|||+|+..++.+..+               
T Consensus        95 ~g~~~lr~~ia~~l~~~~g~~~-------------------~~~~v~~t~G~~~al~~~~~~l~~---------------  140 (447)
T 3b46_A           95 RGRPSLINSLIKLYSPIYNTEL-------------------KAENVTVTTGANEGILSCLMGLLN---------------  140 (447)
T ss_dssp             TCCHHHHHHHHHHHTTTTTSCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHHHHHhcCCCC-------------------ChhhEEEeCCHHHHHHHHHHHHcC---------------
Confidence            3567788888999988888763                   234689999999999988876532               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC------------CCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD------------KLSLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~------------~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                          ++..|++.+..|.++..++...|.+++.||.++            ++.+|+++|+++|++.      +.+|+++.+
T Consensus       141 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p  210 (447)
T 3b46_A          141 ----AGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAVIINTP  210 (447)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEEEEESS
T ss_pred             ----CCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEEEEeCC
Confidence                245788999999999999888888999999854            4689999999988532      457777889


Q ss_pred             CCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         305 TTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       305 tT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      ++++|.+   +++++|+++|++||+++++|++|+....-.+  .+.....+....|.+..++||+++.| +-+|.+
T Consensus       211 ~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~  286 (447)
T 3b46_A          211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWV  286 (447)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEE
T ss_pred             CCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEE
Confidence            9999998   7899999999999999999999987542110  11111001113588999999998633 335654

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.54  E-value=4.2e-14  Score=142.79  Aligned_cols=151  Identities=9%  Similarity=-0.015  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE---eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF---QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf---tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .++.+.+++++|.+.                       .++   ++|||+||..++.+...                   
T Consensus        76 ~~Le~~lA~l~g~e~-----------------------alv~p~~~sGt~Ai~~al~all~-------------------  113 (427)
T 3i16_A           76 DSLDAVYARVFNTES-----------------------ALVRPHFVNGTHALGAALFGNLR-------------------  113 (427)
T ss_dssp             HHHHHHHHHHHTCSE-----------------------EEEETTCCSHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHhCCcc-----------------------eEEeCCCccHHHHHHHHHHHHhC-------------------
Confidence            566788999999871                       355   89999999888765422                   


Q ss_pred             CceEEEecC-CCchHHHHH-----------HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc----C
Q psy1596         241 SRLVAYCSD-QAHSSVEKA-----------GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL----G  304 (375)
Q Consensus       241 ~~~vV~~S~-~aH~Sv~ka-----------a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~----G  304 (375)
                      ++..|++++ ..|......           +...|.+++.++.+++|.+|+++|+++|++..    .+.+|+++.    +
T Consensus       114 pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~----~tklV~i~~s~~~p  189 (427)
T 3i16_A          114 PGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDE----SITLVHIQRSTGYG  189 (427)
T ss_dssp             TTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCT----TEEEEEEECSCCSS
T ss_pred             CCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCC----CCEEEEEEcCCCCC
Confidence            345788887 778766533           33457889999998899999999999997311    245777777    8


Q ss_pred             CCCccccccHHHHHHHHHh--cCCEEEEecccccCcc-cchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         305 TTGACAFDNLEELGPICEK--EGLWLHVDAAYAGSSF-ICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       305 tT~tGavDpl~eI~~ia~~--~~iwlHVDaA~gg~~~-~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      ++++|.+.|+++|+++|++  +|++++||+||+.+.. ..|.    ..   .+|.++.++||+++.
T Consensus       190 ~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~----~~---gaDiv~~S~sK~lgg  248 (427)
T 3i16_A          190 WRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPT----DV---GADLIAGSLIKNIGG  248 (427)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGG----GG---TCSEEEEETTSGGGT
T ss_pred             CCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCcc----cc---CCeEEEecCcccCCC
Confidence            9999999999999999999  9999999999987752 2221    11   369999999999876

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.54  E-value=9.1e-14  Score=134.84  Aligned_cols=173  Identities=10%  Similarity=-0.085  Sum_probs=128.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+++.+|.+.                   ++...++|+|||+++..++.+...               
T Consensus        59 ~g~~~lr~~la~~l~~~~g~~~-------------------~~~~i~~t~g~~~al~~~~~~~~~---------------  104 (376)
T 3ezs_A           59 AFEESLRAAQRGFFKRRFKIEL-------------------KENELISTLGSREVLFNFPSFVLF---------------  104 (376)
T ss_dssp             TCCHHHHHHHHHHHHHHHSCCC-------------------CGGGEEEESSSHHHHHHHHHHHTT---------------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CHHHEEECcCcHHHHHHHHHHHcC---------------
Confidence            3556788999999999999853                   234689999999999988876532               


Q ss_pred             hhhcC--ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596         237 AEINS--RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD--  312 (375)
Q Consensus       237 ~~~~~--~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD--  312 (375)
                          +  +..|+++..+|.++..++...+.+++.+|.++++.+++ +|++++.++      +.+|+.+.+++++|.+-  
T Consensus       105 ----~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~~------~~~v~~~~p~nptG~~~~~  173 (376)
T 3ezs_A          105 ----DYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQE------VDLVILNSPNNPTGRTLSL  173 (376)
T ss_dssp             ----TCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHHH------CSEEEECSSCTTTCCCCCH
T ss_pred             ----CCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhccC------CCEEEEcCCCCCcCCCCCH
Confidence                2  45788999999999999988889999999987655666 788888754      33677778899999984  


Q ss_pred             -cHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhc--C--CCcccEEEEcCcccCC-CCCcceee
Q psy1596         313 -NLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLA--G--VEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~--g--ie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                       .+++|+++|++||+++++|++|+....-.+  .......  +  -...+.+..++||+++ ....+|.+
T Consensus       174 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~  243 (376)
T 3ezs_A          174 EELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFI  243 (376)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEE
T ss_pred             HHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEE
Confidence             477888889999999999999998543110  1111110  0  1234788899999985 34445543

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.54  E-value=1.4e-13  Score=132.54  Aligned_cols=158  Identities=10%  Similarity=-0.065  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                     +...++|+|||+++..++.++                       .
T Consensus        64 ~~l~~~la~~~~~~---------------------~~~i~~~~g~t~al~~~~~~~-----------------------d   99 (361)
T 3ftb_A           64 RRLNKSIENYLKLK---------------------DIGIVLGNGASEIIELSISLF-----------------------E   99 (361)
T ss_dssp             HHHHHHHHHHHTCC---------------------SCEEEEESSHHHHHHHHHTTC-----------------------S
T ss_pred             HHHHHHHHHHhCCC---------------------cceEEEcCCHHHHHHHHHHHc-----------------------C
Confidence            67788888888875                     236899999999998887654                       1


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---cHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---NLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---pl~eI~~i  320 (375)
                      .|+++..+|.++..++...|.+++.+|.++++.+++++|++++++       +.+|+.+.+++++|.+-   ++++|+++
T Consensus       100 ~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~  172 (361)
T 3ftb_A          100 KILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-------VDSVIIGNPNNPNGGLINKEKFIHVLKL  172 (361)
T ss_dssp             EEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-------CSEEEEETTBTTTTBCCCHHHHHHHHHH
T ss_pred             cEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence            588889999999999988889999999988888999999998865       23777888999999884   57788888


Q ss_pred             HHhcCCEEEEecccccCcccc-hhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596         321 CEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                      |++||+++++|++|+.+..-. ...... .+....+.+..++||.++.| ...|.
T Consensus       173 ~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~g~  226 (361)
T 3ftb_A          173 AEEKKKTIIIDEAFIEFTGDPSSSFVGE-IKNYSCLFIIRAMTKFFAMPGIRFGY  226 (361)
T ss_dssp             HHHHTCEEEEECSSGGGTCCTTSSSGGG-TTTCSSEEEEEESSSTTSCGGGCCEE
T ss_pred             hhhcCCEEEEECcchhhcCCcccchhHh-cccCCCEEEEeeChhhcCCCCcceeE
Confidence            999999999999998765420 000011 11112345677999998633 44554

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.53  E-value=3.7e-14  Score=139.23  Aligned_cols=172  Identities=10%  Similarity=-0.024  Sum_probs=129.2

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      |..++++.+.+|+.+.+|.+.                   ++ ...++|+|||+++..++.+...               
T Consensus        62 g~~~l~~~la~~~~~~~~~~~-------------------~~~~~i~~~~g~~~a~~~~~~~~~~---------------  107 (410)
T 3e2y_A           62 GHPALVKALSCLYGKIYQRQI-------------------DPNEEILVAVGAYGSLFNSIQGLVD---------------  107 (410)
T ss_dssp             CCHHHHHHHHHHHHHHHTSCC-------------------CTTTSEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             ChHHHHHHHHHHHHHHhCCCC-------------------CCCCCEEEeCCcHHHHHHHHHHhcC---------------
Confidence            456778899999999988873                   33 4689999999999988876532               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-----------CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCC
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-----------DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGT  305 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-----------~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~Gt  305 (375)
                          ++..|+++..+|.++...+...+.+++.+|.+           +++.+|+++|++++++.      +.+|+.+.++
T Consensus       108 ----~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~  177 (410)
T 3e2y_A          108 ----PGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIILNTPH  177 (410)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEEEESSC
T ss_pred             ----CCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEEEeCCC
Confidence                23578889999999999888888899999875           35679999999988542      4577788899


Q ss_pred             CCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCC-CCcceee
Q psy1596         306 TGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMV-HFDCTAM  374 (375)
Q Consensus       306 T~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~-P~~~g~l  374 (375)
                      +++|.+   +++++|+++|++||+++++|++|+....-..   .+.. +.+....+.+..+++|.++. .+.+|++
T Consensus       178 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~g~~G~r~G~~  252 (410)
T 3e2y_A          178 NPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIAT-LPGMWERTITIGSAGKTFSVTGWKLGWS  252 (410)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG-STTCGGGEEEEEEHHHHSSCGGGCCEEE
T ss_pred             CCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHH-cCCccCeEEEEecchhhcCCCCceEEEE
Confidence            999998   7899999999999999999999987542110   1111 11111234677789999863 3445554

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.53  E-value=7e-14  Score=136.56  Aligned_cols=179  Identities=10%  Similarity=0.012  Sum_probs=128.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCC-CCCCCCCchhhHHHHhcCCCCCC-cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         157 LDRDKYSSKVLDFVSKENATP-TKDPTPSLDKELLVIFGFLRPPN-FITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p-~~~~~~~~~~~~~~~~g~~~~~~-~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .|..++++++.+|+++.+|.+ .                   ++. ..++|+|||+++..++.+.+...       +   
T Consensus        66 ~g~~~lr~~la~~l~~~~g~~~~-------------------~~~~~i~~t~g~~~al~~~~~~~~~~g-------~---  116 (396)
T 3jtx_A           66 AGLPELRQACANWLKRRYDGLTV-------------------DADNEILPVLGSREALFSFVQTVLNPV-------S---  116 (396)
T ss_dssp             TCCHHHHHHHHHHHHHHTTTCCC-------------------CTTTSEEEESSHHHHHHHHHHHHCCC------------
T ss_pred             CCcHHHHHHHHHHHHHhcCCCCC-------------------CCCCeEEEcCCcHHHHHHHHHHHhCCC-------C---
Confidence            355678899999999998975 2                   234 68999999999998887654210       0   


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                          ...+..|+++..+|.++..++...|.+++.+|.++ .+.+|+++|++++++.      +.+|+.+.+++++|.+-+
T Consensus       117 ----~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~nptG~~~~  186 (396)
T 3jtx_A          117 ----DGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKR------TKLVFVCSPNNPSGSVLD  186 (396)
T ss_dssp             -----CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHT------EEEEEEESSCTTTCCCCC
T ss_pred             ----ccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccC------cEEEEEECCCCCCCCcCC
Confidence                00014788999999999998888888999999864 4478999999999763      447777789999999854


Q ss_pred             ---HHHHHHHHHhcCCEEEEecccccCcccc----hhhhhh--hcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         314 ---LEELGPICEKEGLWLHVDAAYAGSSFIC----PEFRKW--LAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       314 ---l~eI~~ia~~~~iwlHVDaA~gg~~~~~----~~~~~~--~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                         +++|+++|++||+++++|++|+....-.    +.....  +..-...+.+..+++|.++.| ..+|.+
T Consensus       187 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (396)
T 3jtx_A          187 LDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFV  257 (396)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEE
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEE
Confidence               5569999999999999999999754311    111100  000023477888999964433 445543

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.53  E-value=1.1e-13  Score=138.82  Aligned_cols=151  Identities=10%  Similarity=-0.011  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       ..++++||++|+..++.+...                   ++.
T Consensus        84 ~~l~~~la~~~g~~-----------------------~~~~~~sG~~Ai~~al~~l~~-------------------~Gd  121 (414)
T 3ndn_A           84 SVFEERLRLIEGAP-----------------------AAFATASGMAAVFTSLGALLG-------------------AGD  121 (414)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHTTCC-------------------TTC
T ss_pred             HHHHHHHHHHHCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            78899999998865                       369999999998887765421                   345


Q ss_pred             EEEecCCCchHHHHHHHH----cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLI----GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~l----g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++..+|.+....+..    .+.+++.||.+     |+++|+++|++.      +.+|++..+++++|.+.|+++|++
T Consensus       122 ~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~ai~~~------t~~v~le~p~NptG~~~~l~~i~~  190 (414)
T 3ndn_A          122 RLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-----DLSQWERALSVP------TQAVFFETPSNPMQSLVDIAAVTE  190 (414)
T ss_dssp             EEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHTSSC------CSEEEEESSCTTTCCCCCHHHHHH
T ss_pred             EEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCccccHHHHHH
Confidence            788999999998877642    67889999875     899999998653      347888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|+++|+++++|++|+.+....|.    -.|   +|.++.+++|+++.+-+  +|++
T Consensus       191 la~~~g~~livDe~~~~~~~~~~~----~~g---~div~~S~sK~l~~~G~~~~G~v  240 (414)
T 3ndn_A          191 LAHAAGAKVVLDNVFATPLLQQGF----PLG---VDVVVYSGTKHIDGQGRVLGGAI  240 (414)
T ss_dssp             HHHHTTCEEEEECTTTHHHHCCCG----GGT---CSEEEEETTTTTTCSSCCCCEEE
T ss_pred             HHHHcCCEEEEECCCcccccCCch----hcC---CCeEeccCCccccCCCCceEEEE
Confidence            999999999999999865433221    123   59999999999876432  5654

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.53  E-value=1.6e-13  Score=139.21  Aligned_cols=152  Identities=12%  Similarity=0.039  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       ..+++++|++|+..++.+...                   ++.
T Consensus       117 ~~l~~~lA~l~g~~-----------------------~~v~~~sG~~Ai~~al~~l~~-------------------~Gd  154 (445)
T 1qgn_A          117 VVLEEKISALEGAE-----------------------STLLMASGMCASTVMLLALVP-------------------AGG  154 (445)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHHSC-------------------SSC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence            67888999998865                       357888888999888875421                   245


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|.+....+    ...|.+++.|+.+     |+++|+++|++++     +.+|+++.+++++|.+.|+++|++
T Consensus       155 ~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~  224 (445)
T 1qgn_A          155 HIVTTTDCYRKTRIFIETILPKMGITATVIDPA-----DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSK  224 (445)
T ss_dssp             EEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS-----CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             EEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHH
Confidence            7888899999887754    2357788888875     8999999998642     257888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC--cceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF--DCTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~--~~g~l  374 (375)
                      +|+++|+++|+|++|+.+....|    .  .+ .+|.++.++||+++.+.  ..|++
T Consensus       225 la~~~g~~livD~a~~~~~~~~~----~--~~-g~Div~~S~sK~~gg~gd~~~G~l  274 (445)
T 1qgn_A          225 LCHEKGALVCIDGTFATPLNQKA----L--AL-GADLVLHSATKFLGGHNDVLAGCI  274 (445)
T ss_dssp             HHHHTTCEEEEECTTTCTTTCCT----T--TT-TCSEEEECTTTTTTCSSSCCCEEE
T ss_pred             HHHHcCCEEEEECCCcccccCCc----c--cc-CCEEEEECCcccccccccceEEEE
Confidence            99999999999999987654322    1  11 37999999999987443  16765

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.53  E-value=7.4e-14  Score=137.70  Aligned_cols=173  Identities=14%  Similarity=0.089  Sum_probs=124.0

Q ss_pred             cchhHHHHHHHHHHHHHc------CCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhcc
Q psy1596         157 LDRDKYSSKVLDFVSKEN------ATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQS  230 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~ll------G~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~  230 (375)
                      .+..++++.+.+|+.+.+      |++.                   +....++|+|||+++..++.+...         
T Consensus        75 ~~~~~lr~~la~~~~~~~~~~~~~~~~~-------------------~~~~v~~~~g~~~al~~~~~~l~~---------  126 (416)
T 1bw0_A           75 VGSPEAREAVATWWRNSFVHKEELKSTI-------------------VKDNVVLCSGGSHGILMAITAICD---------  126 (416)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCSTTTGGGC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------
T ss_pred             CCCHHHHHHHHHHHHhhhcccccCCCCC-------------------CcceEEEeCChHHHHHHHHHHhCC---------
Confidence            355667777777777432      3331                   234689999999999888776522         


Q ss_pred             CCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596         231 HPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA  308 (375)
Q Consensus       231 ~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t  308 (375)
                                ++..|+++..+|.++..++...|.+++.+|.++  ++.+|+++|++++++.      +.+|+.+.+++++
T Consensus       127 ----------~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~npt  190 (416)
T 1bw0_A          127 ----------AGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNPC  190 (416)
T ss_dssp             ----------TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTTT
T ss_pred             ----------CCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCCCCC
Confidence                      235788999999999998888888999999854  4779999999988643      3467777789999


Q ss_pred             ccccc---HHHHHHHHHhcCCEEEEecccccCcccch----hhhhhhcCCCc--ccEEEEcCcccCCCC-Ccceee
Q psy1596         309 CAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICP----EFRKWLAGVEY--ANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       309 GavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~----~~~~~~~gie~--aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      |.+-+   +++|+++|++||+++++|++|+....-..    .+. .+..+..  -+.++.+++|+++.| +.+|.+
T Consensus       191 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~  265 (416)
T 1bw0_A          191 GSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFT-SVADFETTVPRVILGGTAKNLVVPGWRLGWL  265 (416)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCC-CTTSSCCSCCEEEEEESTTTTSCGGGCCEEE
T ss_pred             CcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCcc-CHHHccCCCcEEEEecchhhCCCCCceEEEE
Confidence            99977   99999999999999999999998432111    011 1122211  134567999997665 335543

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.53  E-value=4.3e-14  Score=139.45  Aligned_cols=173  Identities=8%  Similarity=0.014  Sum_probs=129.7

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|..++++.+.+|+.+.+|.+.                   ++ ...++|+|||+++..++.+...              
T Consensus        67 ~g~~~lr~~la~~~~~~~g~~~-------------------~~~~~i~~~~g~~~a~~~~~~~~~~--------------  113 (422)
T 3fvs_A           67 FGYPPLTKILASFFGELLGQEI-------------------DPLRNVLVTVGGYGALFTAFQALVD--------------  113 (422)
T ss_dssp             TCCHHHHHHHHHHHHHHHTCCC-------------------CHHHHEEEESHHHHHHHHHHHHHCC--------------
T ss_pred             CCCHHHHHHHHHHHHHhhCCCC-------------------CCCCcEEEECChHHHHHHHHHHHcC--------------
Confidence            3556778999999999999873                   22 3689999999999888876522              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC------------CCCcCHHHHHHHHHHhhhcCCccEEEEEEc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD------------KLSLRGDKLIEAIERDKKKHLIPFFVCGTL  303 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~------------~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~  303 (375)
                           ++..|+++..+|.++..++...+.+++.+|.+.            ++.+|+++|+++++++      +.+|+.+.
T Consensus       114 -----~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~  182 (422)
T 3fvs_A          114 -----EGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALVLNT  182 (422)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEEEES
T ss_pred             -----CCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceEEEECC
Confidence                 345788999999999998888888999999875            4479999999988643      44777888


Q ss_pred             CCCCccccc---cHHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         304 GTTGACAFD---NLEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       304 GtT~tGavD---pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +++++|.+-   ++++|+++|++||+++++|++|+....-..   .+.. +......+.+..+++|.++.| ...|.+
T Consensus       183 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~g~~G~r~G~~  259 (422)
T 3fvs_A          183 PNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIAS-LPGMWERTLTIGSAGKTFSATGWKVGWV  259 (422)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG-STTTGGGEEEEEEHHHHHTCGGGCCEEE
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhh-cccccCcEEEEecchhccCCccceEEEE
Confidence            999999986   799999999999999999999987532110   1111 111112356778899998644 455654

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.53  E-value=7.1e-14  Score=138.17  Aligned_cols=173  Identities=9%  Similarity=-0.008  Sum_probs=129.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .+..++++.+.+|+.+.+|.+.                   ++ ...++|+|||+++..++.+...              
T Consensus        85 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~~v~~t~G~~~al~~~~~~l~~--------------  131 (404)
T 2o1b_A           85 HGKEAFKQAIVDFYQRQYNVTL-------------------DKEDEVCILYGTKNGLVAVPTCVIN--------------  131 (404)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCC-------------------CTTTSEEEESSHHHHHHHHHHHHCC--------------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCC-------------------CCcccEEEcCCcHHHHHHHHHHhcC--------------
Confidence            3567778888888888889863                   22 4689999999999888876532              


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD--  312 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD--  312 (375)
                           ++..|+++..+|.++..++...+.+++.+|.++ ++.+|+++|+++++..      +.+|+++.+++++|.+-  
T Consensus       132 -----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~  200 (404)
T 2o1b_A          132 -----PGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDK------TKLIYLTYPNNPTGSTATK  200 (404)
T ss_dssp             -----TTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCH
T ss_pred             -----CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccC------ceEEEEcCCCCCCCccCCH
Confidence                 235788899999999999888888999999875 4568999999999643      34677777889999885  


Q ss_pred             -cHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         313 -NLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       313 -pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                       ++++|+++|+++|+++++|++|+.+..-.+  .... +.+....|.++.++||+++.| +.+|++
T Consensus       201 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~  265 (404)
T 2o1b_A          201 EVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILA-SENGKDVAIEIYSLSKGYNMSGFRVGFA  265 (404)
T ss_dssp             HHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGG-STTHHHHEEEEEESTTTTTCGGGCCEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhh-cCCCCCCEEEEEecchhccCchhheEeE
Confidence             588999999999999999999988542110  0111 001112467899999998744 345654

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.53  E-value=8.8e-14  Score=134.79  Aligned_cols=166  Identities=11%  Similarity=-0.008  Sum_probs=125.1

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .++++.+.+|+.+.+|.+.                   +....++|+|||+++..++.+...                  
T Consensus        61 ~~lr~~la~~~~~~~~~~~-------------------~~~~i~~t~g~~~a~~~~~~~~~~------------------  103 (377)
T 3fdb_A           61 SLLSQATAEFYADRYGYQA-------------------RPEWIFPIPDVVRGLYIAIDHFTP------------------  103 (377)
T ss_dssp             CCHHHHHHHHHHHHHCCCC-------------------CGGGEEEESCHHHHHHHHHHHHSC------------------
T ss_pred             HHHHHHHHHHHHHHhCCCC-------------------CHHHEEEeCChHHHHHHHHHHhcC------------------
Confidence            5667899999999988773                   335689999999999888876532                  


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---cHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---NLEE  316 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---pl~e  316 (375)
                       ++..|+++..+|.++..++...+.+++.+|.+++  +|+++|++++++.      +.+|+.+.+++++|.+-   ++++
T Consensus       104 -~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~  174 (377)
T 3fdb_A          104 -AQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQAG------ARSILLCNPYNPLGMVFAPEWLNE  174 (377)
T ss_dssp             -TTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHTT------CCEEEEESSBTTTTBCCCHHHHHH
T ss_pred             -CCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhccC------CCEEEEeCCCCCCCCCCCHHHHHH
Confidence             2346889999999999998888889999999876  9999999999764      33788888899999884   5788


Q ss_pred             HHHHHHhcCCEEEEecccccCcccc-hhhhhhhcCC--CcccEEEEcCcccCCCC-Ccce
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFIC-PEFRKWLAGV--EYANSIAFNPSKWLMVH-FDCT  372 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~-~~~~~~~~gi--e~aDSi~~d~HK~l~~P-~~~g  372 (375)
                      |+++|++||+++++|++|+....-. ..... +..+  ...+.+..+++|+++.| ...|
T Consensus       175 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~G~r~G  233 (377)
T 3fdb_A          175 LCDLAHRYDARVLVDEIHAPLVFDGQHTVAA-GVSDTAASVCITITAPSKAWNIAGLKCA  233 (377)
T ss_dssp             HHHHHHHTTCEEEEECTTGGGBSSSCCCCGG-GSCHHHHHHEEEEECSTTTTTCGGGCCE
T ss_pred             HHHHHHHcCCEEEEEcccchhhcCCCCCccc-HHHccCCCcEEEEEeChHhccCcchhhe
Confidence            8888999999999999998854321 00001 1111  12246788999998533 4455

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.53  E-value=9.1e-14  Score=140.23  Aligned_cols=145  Identities=9%  Similarity=0.039  Sum_probs=119.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       ..+++++|++|+..++.+...                   ++.
T Consensus        85 ~~le~~lA~l~g~~-----------------------~~v~~~sG~~Ai~~al~al~~-------------------~Gd  122 (430)
T 3ri6_A           85 EDLEQRLKNLTGAL-----------------------GVLALGSGMAAISTAILTLAR-------------------AGD  122 (430)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHHCCC-----------------------cEEEECCHHHHHHHHHHHHhC-------------------CCC
Confidence            78889999999876                       268899999999888876522                   345


Q ss_pred             EEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|.+....    +...|.+++.|+.+     |+++|+++|++.      +.+|+...+++++|.+.|+++|++
T Consensus       123 ~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-----d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~  191 (430)
T 3ri6_A          123 SVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-----DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSK  191 (430)
T ss_dssp             EEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             EEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHH
Confidence            789999999988884    44568899999876     899999998653      458888899999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|+++|+++++|++|+.+....|.    ..|   +|.++.+++|+++.|
T Consensus       192 la~~~g~~livD~a~~~~~~~~~~----~~g---~div~~S~sK~l~g~  233 (430)
T 3ri6_A          192 VVHAKGIPLVVDTTMTPPYLLEAK----RLG---VDIEVLSSTKFISGG  233 (430)
T ss_dssp             HHHTTTCCEEEECTTSCTTTCCGG----GGT---CSEEEEECCCEEETT
T ss_pred             HHHHcCCEEEEECCCcccccCChH----HcC---CEEEEECCcccccCC
Confidence            999999999999999987654332    223   699999999999876

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.52  E-value=5.6e-14  Score=150.02  Aligned_cols=164  Identities=11%  Similarity=0.128  Sum_probs=125.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCCh-HHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTA-SESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGG-T~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      .++.+.+++++|.+                       ..+|+++| |.||..++.+...                   ++
T Consensus       198 ~eaE~~lA~~fGa~-----------------------~a~~v~nGts~An~~ai~al~~-------------------pG  235 (715)
T 3n75_A          198 KEAEQYIARVFNAD-----------------------RSYMVTNGTSTANKIVGMYSAP-------------------AG  235 (715)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHHCC-------------------TT
T ss_pred             HHHHHHHHHHhCCC-----------------------CceEECcHHHHHHHHHHHHhCC-------------------CC
Confidence            78889999999987                       13555555 6888887766432                   45


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCC----c-----CHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLS----L-----RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD  312 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~----m-----d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD  312 (375)
                      +.|+++..+|.|+..++++.|.+++.++.+. .+.    +     |+++|+++|++.... ..|.+|++|.+ |.+|.+-
T Consensus       236 D~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~-k~p~~vivt~p-n~~G~v~  313 (715)
T 3n75_A          236 STILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLY  313 (715)
T ss_dssp             CEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTC-CSCSEEEEESS-CTTSEEE
T ss_pred             CEEEECCCccHHHHHHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCc-cCceEEEEECC-CCCCccC
Confidence            6899999999999999999999999998752 222    4     899999999874321 12557888888 8999999


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC---cccEE---EEcCcccCCCCCcceee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE---YANSI---AFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie---~aDSi---~~d~HK~l~~P~~~g~l  374 (375)
                      |+++|+++|+++  +++||+||+++..+.|.+... ..+.   .+|.+   +.++||+|+.+.++|++
T Consensus       314 dl~~I~ela~~~--~livDEAH~~~~~f~~~~~~~-~al~~g~~aD~vii~~~S~hKtL~gltqgs~i  378 (715)
T 3n75_A          314 NTDFIKKTLDVK--SIHFDSAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASMI  378 (715)
T ss_dssp             CHHHHHHHCCCS--EEEEECTTCTTGGGSGGGTTS-STTSSSCCTTCEEEEEECHHHHSSCCTTCEEE
T ss_pred             CHHHHHHHhCcC--cEEEccccccccccCCccccc-cccccCcCCCEEEEEEecccccccCCCCeeEE
Confidence            999999999876  389999999886566654321 1221   36876   99999999998888775

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.52  E-value=5.1e-14  Score=141.30  Aligned_cols=151  Identities=8%  Similarity=-0.088  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE---eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF---QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf---tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      +++.+.+++++|.+                       ..++   ++|||+||..++.+...                   
T Consensus        62 ~~Le~~lA~l~g~e-----------------------~alv~p~~~sGt~Ai~~al~all~-------------------   99 (409)
T 3jzl_A           62 DTLERVYATVFKTE-----------------------AALVRPQIISGTHAISTVLFGILR-------------------   99 (409)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEETTSCSHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCCccHHHHHHHHHHHhcC-------------------
Confidence            56677899999876                       1355   89999999888765422                   


Q ss_pred             CceEEEecC-CCchHHHHHH----------HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc----CC
Q psy1596         241 SRLVAYCSD-QAHSSVEKAG----------LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL----GT  305 (375)
Q Consensus       241 ~~~vV~~S~-~aH~Sv~kaa----------~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~----Gt  305 (375)
                      ++..|++++ ..|......+          ...|.+++.++.+++|.+|+++|+++|++.      +.+|+.+.    ++
T Consensus       100 ~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~  173 (409)
T 3jzl_A          100 PDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPK------TKMIGIQRSRGYAD  173 (409)
T ss_dssp             TTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTT------EEEEEEECSCTTSS
T ss_pred             CCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCC------CeEEEEECCCCCCC
Confidence            345788887 8887777533          345778999999889999999999998643      45788887    89


Q ss_pred             CCccccccHHHHHHHHHh--cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         306 TGACAFDNLEELGPICEK--EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       306 T~tGavDpl~eI~~ia~~--~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +++|.+.|+++|+++|++  +|+++|||+||+.+.....   ..-.   .+|.++.++||+++.+
T Consensus       174 nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~---p~~~---g~Div~~S~sK~lgg~  232 (409)
T 3jzl_A          174 RPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQE---PPEV---GADIIAGSLIKNPGGG  232 (409)
T ss_dssp             SCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCC---SGGG---TCSEEEEETTSGGGTT
T ss_pred             CCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCC---cccc---CCeEEEECccccCCcc
Confidence            999999999999999999  9999999999987652111   1112   3699999999998764

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.52  E-value=2e-13  Score=137.60  Aligned_cols=176  Identities=12%  Similarity=-0.048  Sum_probs=126.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+.+|.+                    +....++|+|||+++..++.+..+               
T Consensus       118 ~g~~~lr~~ia~~~~~~~g~~--------------------~~~~v~~t~G~~~al~~~~~~l~~---------------  162 (448)
T 3aow_A          118 KGFTPLRETLMKWLGKRYGIS--------------------QDNDIMITSGSQQALDLIGRVFLN---------------  162 (448)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCC--------------------TTSEEEEESSHHHHHHHHHHHHCC---------------
T ss_pred             CCcHHHHHHHHHHHHHhcCcC--------------------ChhhEEEeCcHHHHHHHHHHHHcC---------------
Confidence            456667777777777777884                    124689999999999888876532               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEE-EEEcCCCCccccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFV-CGTLGTTGACAFD---  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~V-v~t~GtT~tGavD---  312 (375)
                          ++..|++.+.+|.++..++...+.+++.||.+++| +|+++|+++|+.+...+..+.+| +...+++++|.+-   
T Consensus       163 ----~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~  237 (448)
T 3aow_A          163 ----PGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNED  237 (448)
T ss_dssp             ----TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHH
T ss_pred             ----CCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHH
Confidence                24578899999999999988888899999998766 99999999997321121235555 4567889999874   


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+++|+++|++||++|++|++|+....-.   +.+... . -...+.+..+++|+++.-+-+|.+
T Consensus       238 ~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~-~-~~~~vi~~~S~SK~~~~GlriG~v  300 (448)
T 3aow_A          238 RRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKAL-D-NEGRVIYLGTFSKILAPGFRIGWM  300 (448)
T ss_dssp             HHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGG-C-TTSCEEEEEESTTTTCGGGCCEEE
T ss_pred             HHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhc-C-CCCCEEEEccchhhccccccEEEE
Confidence            57899999999999999999998864311   111111 1 112356778899998722235654

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.51  E-value=5.7e-14  Score=141.74  Aligned_cols=160  Identities=8%  Similarity=-0.048  Sum_probs=120.6

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      ++++.+++++++|.+.                    ...-+++++||+||..++.+...                   ++
T Consensus        67 ~~~l~~~la~~~g~~~--------------------~~~~i~~~sGt~Ai~~al~al~~-------------------~G  107 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEA--------------------GLVRPQIISGTHAISTALFGILR-------------------PG  107 (431)
T ss_dssp             HHHHHHHHHHHTTCSE--------------------ECCBTTSCSHHHHHHHHHHTTCC-------------------TT
T ss_pred             HHHHHHHHHHHhCCCc--------------------ccccceeeCHHHHHHHHHHHhCC-------------------CC
Confidence            4788999999999872                    11112245889999888765321                   34


Q ss_pred             eEEEecC-CCchHHHHHHHH----------cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc----CCCC
Q psy1596         243 LVAYCSD-QAHSSVEKAGLI----------GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL----GTTG  307 (375)
Q Consensus       243 ~vV~~S~-~aH~Sv~kaa~l----------g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~----GtT~  307 (375)
                      ..|++++ ..|.+....+.+          .+.+++.++.+++|.+|+++|+++|++.      +.+|+++.    +++.
T Consensus       108 d~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~  181 (431)
T 3ht4_A          108 DELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRP  181 (431)
T ss_dssp             CEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSC
T ss_pred             CEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCC
Confidence            5677777 889988877643          4778999999888999999999998643      45777776    7788


Q ss_pred             ccccccHHHHHHHHHh--cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC---CCcceee
Q psy1596         308 ACAFDNLEELGPICEK--EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV---HFDCTAM  374 (375)
Q Consensus       308 tGavDpl~eI~~ia~~--~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~---P~~~g~l  374 (375)
                      +|.++++++|+++|++  +|++++||++|+.+.....   ....|   +|.++.++||+++.   |.| |++
T Consensus       182 ~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~---~~~~g---~Di~~~S~sK~lgg~~~~~G-G~v  246 (431)
T 3ht4_A          182 SFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQE---PCHVG---ADLMAGSLIKNPGGGIVKTG-GYI  246 (431)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCC---GGGTT---CSEEEEETTSGGGTTTCSSC-EEE
T ss_pred             cCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCC---ccccC---CeEEEcCccccCCCCCCCce-EEE
Confidence            8999999999999999  9999999999998763211   11113   69999999999654   555 544

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.51  E-value=1.4e-13  Score=133.58  Aligned_cols=146  Identities=14%  Similarity=0.042  Sum_probs=112.5

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCc
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSL  277 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~m  277 (375)
                      ...++|+|||+|+..++.+...                   ++..|+++..+|.++..++...|.+++.+|++  +++.+
T Consensus        82 ~~v~~~~g~~~a~~~~~~~l~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~  142 (375)
T 3op7_A           82 EQILQTNGATGANLLVLYSLIE-------------------PGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLP  142 (375)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCC-------------------TTCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEE
T ss_pred             hhEEEcCChHHHHHHHHHHhcC-------------------CCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCC
Confidence            4689999999999988876532                   34578999999999999888888899999886  35679


Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccCccc-chhhhhhhcCCCc
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKWLAGVEY  353 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~~~gie~  353 (375)
                      |+++|++++++.      +.+|+.+.+++++|.+-|   +++|+++|++||+++++|++|+.+..- .+..... .   .
T Consensus       143 d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~-~---~  212 (375)
T 3op7_A          143 DLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEV-Y---D  212 (375)
T ss_dssp             CHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHH-C---T
T ss_pred             CHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhh-c---C
Confidence            999999998643      447778889999999988   999999999999999999999886432 1111111 1   2


Q ss_pred             ccEEEEcCcccCCCC-Ccceee
Q psy1596         354 ANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       354 aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      .+.+..+++|.++.| ..+|.+
T Consensus       213 ~~i~~~s~sK~~~~~G~r~G~v  234 (375)
T 3op7_A          213 KGIAVNSLSKTYSLPGIRIGWV  234 (375)
T ss_dssp             TEEEEEESSSSSSCGGGCCEEE
T ss_pred             CEEEEeEChhhcCCcccceEEE
Confidence            357788999998744 344543

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.50  E-value=1.1e-13  Score=140.85  Aligned_cols=152  Identities=11%  Similarity=0.078  Sum_probs=119.3

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ..+++.+|+++++|.+                       ..+++++|++|+..++. ..                   .+
T Consensus       134 ~~~~l~~~la~~~g~~-----------------------~~i~~~sGt~al~~~l~-~~-------------------~~  170 (464)
T 1ibj_A          134 TRDALESLLAKLDKAD-----------------------RAFCFTSGMAALSAVTH-LI-------------------KN  170 (464)
T ss_dssp             HHHHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHT-TS-------------------CT
T ss_pred             HHHHHHHHHHHHhCCC-----------------------eEEEECCHHHHHHHHHH-Hh-------------------CC
Confidence            3488999999999865                       36889999998765542 11                   13


Q ss_pred             ceEEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      +..|++++.+|.++...+    ...|.+++.+|.+     |+++|+++|++.      +.+|+++.+++++|.+.|+++|
T Consensus       171 Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i  239 (464)
T 1ibj_A          171 GEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKI  239 (464)
T ss_dssp             TCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHH
T ss_pred             CCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHH
Confidence            457889999999987753    3457888888874     899999988632      4588889999999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc--eee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC--TAM  374 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~--g~l  374 (375)
                      +++|+++|+++++|++|+.+....+. .   .   .+|.++.++||+++.|.|+  |++
T Consensus       240 ~~la~~~gi~livDea~~~g~~~~~~-~---~---~~div~~S~sK~~~g~~Gl~~G~l  291 (464)
T 1ibj_A          240 SEMAHAQGALVLVDNSIMSPVLSRPL-E---L---GADIVMHSATKFIAGHSDVMAGVL  291 (464)
T ss_dssp             HHHHHTTTCEEEEECTTTCTTTCCGG-G---T---TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred             HHHHHHcCCEEEEECCCcccccCChh-h---c---CCEEEEECCcccccCCCCCcEEEE
Confidence            99999999999999999876543331 1   1   3699999999999988765  765

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.50  E-value=2.2e-13  Score=135.30  Aligned_cols=153  Identities=15%  Similarity=0.051  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..++|+|||+|+..++.+.+                    ++.
T Consensus        55 ~~l~~~la~~~~~~-----------------------~v~~~~ggt~al~~~l~~l~--------------------~gd   91 (424)
T 2po3_A           55 REFEERVAGLAGVR-----------------------HAVATCNATAGLQLLAHAAG--------------------LTG   91 (424)
T ss_dssp             HHHHHHHHHHHTSS-----------------------EEEEESCHHHHHHHHHHHHT--------------------CCS
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHcC--------------------CCC
Confidence            56777788887765                       47999999999999887652                    123


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|++++.+|.++..++...|.+++.+++++ ++.+|+++|+++|++.      +.+|+++   +.+|.++++++|+++|+
T Consensus        92 ~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~tG~~~~l~~i~~la~  162 (424)
T 2po3_A           92 EVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPR------TSAVVGV---HLWGRPCAADQLRKVAD  162 (424)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTT------EEEEEEE---CGGGCCCCHHHHHHHHH
T ss_pred             EEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcC------CcEEEEE---CCCCCcCCHHHHHHHHH
Confidence            689999999999999888888999999975 7889999999988642      3355554   37899999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCc--ccCCCCCcceee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPS--KWLMVHFDCTAM  374 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~H--K~l~~P~~~g~l  374 (375)
                      ++|+++++|+||+.+..+..  +. +..  ..|.++.++|  |++.. ..+|++
T Consensus       163 ~~~~~li~Dea~~~g~~~~~--~~-~~~--~~di~~~S~sk~K~l~~-~~~G~~  210 (424)
T 2po3_A          163 EHGLRLYFDAAHALGCAVDG--RP-AGS--LGDAEVFSFHATKAVNA-FEGGAV  210 (424)
T ss_dssp             HTTCEEEEECTTCTTCEETT--EE-TTS--SSSEEEEECCTTSSSCC-SSCEEE
T ss_pred             HcCCEEEEECccccCCeECC--ee-ccc--ccCEEEEeCCCCCCccC-CCCeEE
Confidence            99999999999995433321  11 111  2466666766  97764 555654

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.50  E-value=1.1e-13  Score=137.92  Aligned_cols=147  Identities=8%  Similarity=0.010  Sum_probs=110.1

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCc
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSL  277 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~m  277 (375)
                      ...++|+|||+|+..++.+.++                   ++..|+++..+|......+...|.+++.+|.+  +++.+
T Consensus       119 ~~v~~t~g~t~al~~~~~~l~~-------------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  179 (427)
T 3dyd_A          119 KDVILTSGCSQAIDLCLAVLAN-------------------PGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEI  179 (427)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEE
T ss_pred             HHEEEecCcHHHHHHHHHHhcC-------------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCC
Confidence            4689999999999988876532                   24578899999999998888888899999875  46789


Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccCcccch---hhhhhhcCC
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICP---EFRKWLAGV  351 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~---~~~~~~~gi  351 (375)
                      |+++|+++|++.      +.+|+.+.+++++|.+-+   +++|+++|+++|+++++|+||++...-..   .....  +.
T Consensus       180 d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~--~~  251 (427)
T 3dyd_A          180 DLKQLEYLIDEK------TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATL--ST  251 (427)
T ss_dssp             CHHHHHSSCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGG--CS
T ss_pred             CHHHHHHHhccC------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHh--CC
Confidence            999999988643      447788888999999988   99999999999999999999998543111   11111  11


Q ss_pred             CcccE-EEEcCcccCCCC-Ccceee
Q psy1596         352 EYANS-IAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       352 e~aDS-i~~d~HK~l~~P-~~~g~l  374 (375)
                       ..+. ++.++||.++.| ..+|.+
T Consensus       252 -~~~vi~~~S~sK~~~~~G~riG~~  275 (427)
T 3dyd_A          252 -DVPILSCGGLAKRWLVPGWRLGWI  275 (427)
T ss_dssp             -SCCEEEEEESTTTSSCGGGCCEEE
T ss_pred             -CCcEEEEeeccccCCCcCcceEEE
Confidence             1233 455999975443 335543

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.50  E-value=1e-13  Score=139.10  Aligned_cols=151  Identities=8%  Similarity=-0.004  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+                       ..++++|||+||..++.+...                   ++.
T Consensus        85 ~~le~~lA~l~g~~-----------------------~~i~~ssGt~Ai~~al~~l~~-------------------~Gd  122 (415)
T 2fq6_A           85 FSLQQAMCELEGGA-----------------------GCVLFPCGAAAVANSILAFIE-------------------QGD  122 (415)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHTTCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEeCCHHHHHHHHHHHHhC-------------------CCC
Confidence            67888899998865                       258889999999888764321                   345


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....+.    ..|.+++.++.+     |+++|+++|+++      +.+|++..+++++|.+.|+++|++
T Consensus       123 ~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-----d~~~le~ai~~~------tklV~~e~~~NptG~v~dl~~I~~  191 (415)
T 2fq6_A          123 HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQPN------TKIVFLESPGSITMEVHDVPAIVA  191 (415)
T ss_dssp             EEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-----CGGGGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhhccC------CcEEEEECCCCCCCEeecHHHHHH
Confidence            78899999998887653    247788888764     889999988653      447888889999999999999999


Q ss_pred             HHHh--cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEK--EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~--~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|++  +|+++|||++|+.+....|.    -.   .+|.++.++||+++.+-+  .|++
T Consensus       192 la~~~~~g~~livD~a~a~~~~~~p~----~~---g~Div~~S~sK~lg~~g~~~~G~l  243 (415)
T 2fq6_A          192 AVRSVVPDAIIMIDNTWAAGVLFKAL----DF---GIDVSIQAATKYLVGHSDAMIGTA  243 (415)
T ss_dssp             HHHHHCTTCEEEEECTTTTTTSSCGG----GG---TCSEEEEETTTTTTCSSSCCCEEE
T ss_pred             HHHhhcCCCEEEEECCCcccccCCcc----cc---CCeEEEEeCccccCCCCCceEEEE
Confidence            9999  99999999999876432221    11   369999999999987754  5665

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.49  E-value=9.1e-14  Score=136.43  Aligned_cols=163  Identities=13%  Similarity=0.078  Sum_probs=111.0

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ..+++.+.+++++++|.+.                      .-+++++||+++..++.+...                  
T Consensus        75 ~~~~~~~~~~la~~~~~~~----------------------~~v~~~sGs~a~~~a~~~~~~------------------  114 (420)
T 3gbx_A           75 DVVEQLAIDRAKELFGADY----------------------ANVQPHSGSQANFAVYTALLQ------------------  114 (420)
T ss_dssp             HHHHHHHHHHHHHHHTCSE----------------------EECCCSSHHHHHHHHHHHHCC------------------
T ss_pred             HHHHHHHHHHHHHHhCCCC----------------------ceeEecCcHHHHHHHHHHhcC------------------
Confidence            3455677799999999861                      235567779999888765432                  


Q ss_pred             cCceEEEecCCCchHHHH-HH--HHc--CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         240 NSRLVAYCSDQAHSSVEK-AG--LIG--LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~k-aa--~lg--~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                       ++..|+++..+|.++.. +.  .+.  +...+.++.++++.+|+++|+++|++..     +.+|+++.+++  |.+.++
T Consensus       115 -~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l  186 (420)
T 3gbx_A          115 -PGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDW  186 (420)
T ss_dssp             -TTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCH
T ss_pred             -CCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCH
Confidence             34578899999988542 22  222  2455667778889999999999998642     34666665544  568899


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++|+++|++||++|++|++|+.+......+   ...++.+|.++.++||+++.|.+ |++
T Consensus       187 ~~l~~l~~~~~~~li~De~~~~~~~~~~~~---~~~~~~~di~~~s~sK~~~g~~g-g~~  242 (420)
T 3gbx_A          187 AKMREIADSIGAYLFVDMAHVAGLIAAGVY---PNPVPHAHVVTTTTHKTLAGPRG-GLI  242 (420)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTHHHHHTTSS---CCSTTTSSEEEEESSGGGCSCSC-EEE
T ss_pred             HHHHHHHHHcCCEEEEECCcchhceecccC---CcccccCCEEEeecccCCCCCCc-eEE
Confidence            999999999999999999987654322111   11233479999999999977775 543

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.49  E-value=3e-13  Score=132.64  Aligned_cols=147  Identities=14%  Similarity=0.004  Sum_probs=108.5

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG  279 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~  279 (375)
                      ...++|+|||+++..++.+...                   ++..|++...+|.++..++...|.+++.+|.++++ +|+
T Consensus        92 ~~v~~~~g~~~al~~~~~~~~~-------------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~d~  151 (397)
T 2zyj_A           92 EEVLITTGSQQALDLVGKVFLD-------------------EGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEG-PDL  151 (397)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECH
T ss_pred             hhEEEeccHHHHHHHHHHHhCC-------------------CCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCC-CCH
Confidence            3589999999999888776532                   23478889999999999988888899999987665 999


Q ss_pred             HHHHHHHHHhhhcCCccEEE-EEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCC
Q psy1596         280 DKLIEAIERDKKKHLIPFFV-CGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVE  352 (375)
Q Consensus       280 e~Le~aI~~~~~~g~~p~~V-v~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie  352 (375)
                      ++|++++++..     +.+| +.+.+++++|.+-+   +++|+++|++||+++++|++|+.+..-.   +.+...  +..
T Consensus       152 ~~l~~~l~~~~-----~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~--~~~  224 (397)
T 2zyj_A          152 DALEEVLKRER-----PRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL--ARE  224 (397)
T ss_dssp             HHHHHHHHHCC-----CSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHH--HHH
T ss_pred             HHHHHHHhhcC-----CeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhh--Ccc
Confidence            99999997621     2244 45677899998854   5699999999999999999999864311   111111  000


Q ss_pred             ---cccEEEEcCcccCCCC-Ccceee
Q psy1596         353 ---YANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       353 ---~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                         .-..+..++||+++ | +.+|++
T Consensus       225 ~~~~~~i~~~s~sK~~~-~G~r~G~~  249 (397)
T 2zyj_A          225 AGYPGVIYLGSFSKVLS-PGLRVAFA  249 (397)
T ss_dssp             HTCCCEEEEEESTTTTC-GGGCCEEE
T ss_pred             cCCCeEEEEeccccccc-ccceeEEE
Confidence               11367889999998 5 556765

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.48  E-value=1.6e-13  Score=138.50  Aligned_cols=150  Identities=11%  Similarity=-0.022  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE---eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF---QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf---tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .++.+.+++++|.+                       ..++   ++|||+||..++.+...                   
T Consensus        77 ~~Le~~lA~l~g~e-----------------------~alv~p~~~sGt~A~~~al~all~-------------------  114 (427)
T 3hvy_A           77 DSLDRVYANIFNTE-----------------------SAFVRPHFVNGTHAIGAALFGNLR-------------------  114 (427)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEETTCCSHHHHHHHHHHHTCC-------------------
T ss_pred             HHHHHHHHHHhCCC-----------------------ceEEeCCCCcHHHHHHHHHHHhcC-------------------
Confidence            66678899999876                       1366   89999999888765421                   


Q ss_pred             CceEEEecC-CCchHHHH-----------HHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc----C
Q psy1596         241 SRLVAYCSD-QAHSSVEK-----------AGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL----G  304 (375)
Q Consensus       241 ~~~vV~~S~-~aH~Sv~k-----------aa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~----G  304 (375)
                      +++.|++++ ..|.....           .+...|.+++.|+. +++.+|+++|+++|++..    .+.+|+++.    +
T Consensus       115 pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~----~tklV~i~~s~gyp  189 (427)
T 3hvy_A          115 PNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDD----SIKLIHIQRSTGYG  189 (427)
T ss_dssp             TTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCT----TEEEEEEESSCCSS
T ss_pred             CCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCC----CCEEEEEECCCCCC
Confidence            355788887 77765542           23345778899988 788999999999997411    255788887    8


Q ss_pred             CCCccccccHHHHHHHHHh--cCCEEEEecccccCcc-cchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         305 TTGACAFDNLEELGPICEK--EGLWLHVDAAYAGSSF-ICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       305 tT~tGavDpl~eI~~ia~~--~~iwlHVDaA~gg~~~-~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      ++++|.+.|+++|+++|++  +|++++||+||+.+.. ..|.    -.   .+|.++.++||+++.
T Consensus       190 ~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~----~~---gaDiv~~S~sK~lgg  248 (427)
T 3hvy_A          190 WRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPT----DV---GADIIAGSLIKNIGG  248 (427)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGG----GG---TCSEEEEETTSGGGT
T ss_pred             CCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCc----cc---CCeEEEECCcccccc
Confidence            9999999999999999999  8999999999987752 2221    11   369999999999876

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.47  E-value=6e-14  Score=137.33  Aligned_cols=162  Identities=12%  Similarity=0.014  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .+|+.+.+++++++|.+.                      .-+++++||+|+..++.++..                   
T Consensus        69 ~~e~~ar~~la~~~g~~~----------------------~~i~~~sGt~a~~~~~~~~~~-------------------  107 (407)
T 2dkj_A           69 RVESLAIERAKALFGAAW----------------------ANVQPHSGSQANMAVYMALME-------------------  107 (407)
T ss_dssp             HHHHHHHHHHHHHHTCSE----------------------EECCCSSHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHHHHhCCCc----------------------ceEEecchHHHHHHHHHHhcC-------------------
Confidence            444556689999999861                      236677788898888876522                   


Q ss_pred             CceEEEecCCCchHHH---HHHHHcCC--eEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         241 SRLVAYCSDQAHSSVE---KAGLIGLV--KMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~---kaa~lg~~--~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                      ++..|++++.+|.++.   .++...|.  ..+.++++ +++.+|+++|+++|++..     +.+|+++.+++  |.+.|+
T Consensus       108 ~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~~~~p~~--~~~~~l  180 (407)
T 2dkj_A          108 PGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHR-----PKVIVAGASAY--PRFWDF  180 (407)
T ss_dssp             TTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEEECCSSC--CSCCCH
T ss_pred             CCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcC-----CeEEEEecccc--CCCCCH
Confidence            2347888999998873   34433333  34444444 378899999999997521     33555544444  578899


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++|.++|+++|+++++|++|+.+........   ..++.+|.++.++||++..+.+ |++
T Consensus       181 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~l~g~~~-G~~  236 (407)
T 2dkj_A          181 KAFREIADEVGAYLVVDMAHFAGLVAAGLHP---NPLPYAHVVTSTTHKTLRGPRG-GLI  236 (407)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTHHHHHTTCSC---CCTTTCSEEEEESSGGGCCCSC-EEE
T ss_pred             HHHHHHHHHcCCEEEEEccccccccccCccC---CccccccEEEEeccccCCCCCc-eEE
Confidence            9999999999999999999988543221110   1123479999999999987776 665

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.46  E-value=4.1e-13  Score=131.42  Aligned_cols=162  Identities=11%  Similarity=0.017  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+++++++|.+                     ....++|+|||+|+..++.+++...                .+
T Consensus        88 ~~~~l~~~la~~~~~~---------------------~~~v~~~~gg~~a~~~al~~~~~~~----------------~~  130 (395)
T 1vef_A           88 MRGEFYRTLTAILPPE---------------------LNRVFPVNSGTEANEAALKFARAHT----------------GR  130 (395)
T ss_dssp             HHHHHHHHHHHTSCTT---------------------EEEEEEESSHHHHHHHHHHHHHHHH----------------SC
T ss_pred             HHHHHHHHHHHhcCCC---------------------cCEEEEcCcHHHHHHHHHHHHHHHh----------------CC
Confidence            4478899999998764                     1358999999999999998765311                01


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC  309 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG  309 (375)
                      +.+|+.+..-|.+...++.+.+.+            +..++.     .|+++|+++|++.      +.+|+++..++++|
T Consensus       131 ~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~~~tG  199 (395)
T 1vef_A          131 KKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEE------TAAVILEPVQGEGG  199 (395)
T ss_dssp             CEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTT------EEEEEECSEETTTT
T ss_pred             CeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhccC------EEEEEEeCccCCCC
Confidence            234545444566666666654443            444443     4899999998632      44677776667899


Q ss_pred             cccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         310 AFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       310 avDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+.+    +++|+++|++||++|++|++|++.......+.....++ .+|.+++  ||+++.+.++|.+
T Consensus       200 ~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~g~~~G~~  265 (395)
T 1vef_A          200 VRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGI-VPDILTL--AKALGGGVPLGVA  265 (395)
T ss_dssp             SEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCEEE
T ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCC-CCCEEEE--cccccCCCceEEE
Confidence            8876    99999999999999999999995321111111111232 3687755  9999988888876

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.46  E-value=5.5e-13  Score=132.28  Aligned_cols=152  Identities=13%  Similarity=-0.021  Sum_probs=112.7

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcC
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLR  278 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md  278 (375)
                      ..++|+|||+|+..++......                 .++..|++++.+|.++...++..|.+++.+|.  ++++.+|
T Consensus       119 ~i~~t~G~t~al~~~~~~~~~~-----------------~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d  181 (420)
T 4f4e_A          119 VTAQALGGTGALKIGADFLRTL-----------------NPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVN  181 (420)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHH-----------------CTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEEC
T ss_pred             EEEECCccHHHHHHHHHHHHHh-----------------CCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccC
Confidence            6899999999998885432210                 13457889999999999999888889999998  4578999


Q ss_pred             HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccc----hhhhhhhcCC
Q psy1596         279 GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC----PEFRKWLAGV  351 (375)
Q Consensus       279 ~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~----~~~~~~~~gi  351 (375)
                      +++|+++|++..   ....+++.+.++++||.+   +++++|+++|+++|+++++|.+|+....-.    +..... .+.
T Consensus       182 ~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~  257 (420)
T 4f4e_A          182 FDGMLAALNGYE---PGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLF-AAA  257 (420)
T ss_dssp             HHHHHHHHTTCC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHH-HHT
T ss_pred             HHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHH-Hhc
Confidence            999999997431   124578888899999988   678899999999999999999998765321    111111 112


Q ss_pred             CcccEEEEcCcccCCCC-Cccee
Q psy1596         352 EYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       352 e~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                      ..-+.+..+++|.++.| ..+|.
T Consensus       258 ~~~~i~~~S~SK~~~~~G~RiG~  280 (420)
T 4f4e_A          258 NLNVFVSSSFSKSFSLYGERVGA  280 (420)
T ss_dssp             TCCEEEEEECTTTTTCGGGCEEE
T ss_pred             CCCEEEEEeCCccCcCcCCCcEE
Confidence            23467788999987642 23454

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.46  E-value=3.9e-12  Score=124.68  Aligned_cols=160  Identities=16%  Similarity=0.061  Sum_probs=117.7

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+.+++++|.+                       ..++.++|+++|..++.+....                 .+
T Consensus        92 ~~~~l~~~la~~~~~~-----------------------~~i~~~sG~~a~~~~~~~l~~~-----------------~~  131 (401)
T 2bwn_A           92 YHRRLEAEIAGLHQKE-----------------------AALVFSSAYNANDATLSTLRVL-----------------FP  131 (401)
T ss_dssp             HHHHHHHHHHHHTTCS-----------------------EEEEESCHHHHHHHHHHHHHHH-----------------ST
T ss_pred             HHHHHHHHHHHHhCCC-----------------------cEEEECCcHHHHHHHHHHHhcC-----------------CC
Confidence            3377888889988865                       2345566666888777654221                 12


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      +..|+++...|.++..+++..+.+++.+|.+     |+++|++++++...  ..+.+|+.+.+++++|.+.|+++|+++|
T Consensus       132 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~  204 (401)
T 2bwn_A          132 GLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIA  204 (401)
T ss_dssp             TCEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHH
T ss_pred             CCEEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHH
Confidence            3578899999999999998888899999975     89999999975321  1356888999999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhh--hhcCC-CcccEEEEcCcccCCCCC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRK--WLAGV-EYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gi-e~aDSi~~d~HK~l~~P~  369 (375)
                      ++||+++++|+||+.+.+ .+....  ...++ +..|.+..+++|+++.|-
T Consensus       205 ~~~~~~li~Dea~~~g~~-~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G  254 (401)
T 2bwn_A          205 EEFGALTYIDEVHAVGMY-GPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG  254 (401)
T ss_dssp             HHHTCEEEEECTTTTTTS-STTSCCHHHHHTCGGGCSEEEEESSSTTCSCC
T ss_pred             HHcCCEEEEecccccccc-CCCCceeeeccCccccCcEEEeechhhccCCC
Confidence            999999999999995432 111000  01122 345888889999988643

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.46  E-value=1.5e-12  Score=133.26  Aligned_cols=148  Identities=16%  Similarity=0.101  Sum_probs=117.5

Q ss_pred             cchhHHHHHHHHHHHHHcC-CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENA-TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG-~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .|...+++++.+|+++..| ++.                   ++...++|+|+++++..++.+..+.          +  
T Consensus       129 ~G~~~lr~~ia~~~~~~~gG~~~-------------------~~~~i~~t~G~~~ai~~~~~~l~~~----------g--  177 (498)
T 3ihj_A          129 QGVNCIREDVAAYITRRDGGVPA-------------------DPDNIYLTTGASDGISTILKILVSG----------G--  177 (498)
T ss_dssp             CSCHHHHHHHHHHHHHHTTTCCC-------------------CGGGEEEESSHHHHHHHHHHHHCCC----------C--
T ss_pred             CCHHHHHHHHHHHHHHhcCCCCC-------------------CcccEEEcCCHHHHHHHHHHHHcCC----------C--
Confidence            4666778899999998884 763                   3456899999999998887654320          0  


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                         ..++..|+++...|.++..++.+.+.+++.+++++  ++.+|+++|+++|++.... ..+.+|+++.++++||.+  
T Consensus       178 ---d~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~-~~~k~i~l~np~NPTG~v~s  253 (498)
T 3ihj_A          178 ---GKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQVQS  253 (498)
T ss_dssp             ---GGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTT-SEEEEEEEESSCTTTCCCCC
T ss_pred             ---CCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhcc-CCCeEEEEECCCCCCCCcCC
Confidence               00234799999999999999988888999999864  4689999999999875321 235677778999999998  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                       +++++|+++|++||+++++|.+|+....
T Consensus       254 ~~~l~~i~~la~~~~~~li~De~y~~~~~  282 (498)
T 3ihj_A          254 RKCIEDVIHFAWEEKLFLLADEVYQDNVY  282 (498)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred             HHHHHHHHHHHHHcCcEEEEEcCcccccc
Confidence             7788899999999999999999987643

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.45  E-value=1.5e-12  Score=128.51  Aligned_cols=176  Identities=7%  Similarity=-0.094  Sum_probs=122.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+..|.+                    .....++|+|||+++..++.+..+               
T Consensus        80 ~g~~~lr~~ia~~~~~~~~~~--------------------~~~~i~~t~g~~~al~~~~~~l~~---------------  124 (418)
T 3rq1_A           80 AGIPDFLCAAEKECFGNFRPE--------------------GHIRSIATAGGTGGIHHLIHNYTE---------------  124 (418)
T ss_dssp             TCCHHHHHHHHHHHHGGGCCS--------------------SEEEEEEESHHHHHHHHHHHHHSC---------------
T ss_pred             CChHHHHHHHHHHHhcccCcc--------------------ccccEEECCchHHHHHHHHHHhcC---------------
Confidence            456667778888887665432                    123689999999999988875422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC-CCCcccccc-
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG-TTGACAFDN-  313 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGavDp-  313 (375)
                          ++..|++++.+|.++..++...|.+++.+|.+ +++.+|+++|++++++....+ ...+|+.+.+ +++||.+-+ 
T Consensus       125 ----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~  199 (418)
T 3rq1_A          125 ----PGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTGYSIED  199 (418)
T ss_dssp             ----TTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCCCCCH
T ss_pred             ----CCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCCCCCCH
Confidence                34578999999999999998888999999984 567999999999998632211 1236777777 899999866 


Q ss_pred             --HHHHHHHHH------hcCCEEEEecccccCcccchhhhh---hhcCCCccc---EEEEcCcccCCCC-Cccee
Q psy1596         314 --LEELGPICE------KEGLWLHVDAAYAGSSFICPEFRK---WLAGVEYAN---SIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       314 --l~eI~~ia~------~~~iwlHVDaA~gg~~~~~~~~~~---~~~gie~aD---Si~~d~HK~l~~P-~~~g~  373 (375)
                        +.+|+++|+      ++|+++++|++|.+...-......   ...++ .-|   .++.+++|.++.| ...|.
T Consensus       200 ~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~  273 (418)
T 3rq1_A          200 KDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHL-PKEILTCVCYSLSKGFTMYGQRVGA  273 (418)
T ss_dssp             HHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTC-CTTEEEEEEEESTTTTTCCSSCCEE
T ss_pred             HHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhc-CCCceEEEEEeCCCCCcCcCCcceE
Confidence              555556666      899999999999765432111111   12222 113   4567999987644 33444

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.45  E-value=1.6e-14  Score=143.95  Aligned_cols=151  Identities=10%  Similarity=-0.101  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE-eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF-QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf-tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +++++.+++++|.+                    ++...+| |+|||+++.+++.....                   ++
T Consensus        75 ~~ar~~la~ll~~~--------------------~~~evif~t~~~T~a~n~ai~~l~~-------------------~g  115 (386)
T 3qm2_A           75 EEAEQDFRDLLNIP--------------------SNYKVLFCHGGGRGQFAGVPLNLLG-------------------DK  115 (386)
T ss_dssp             HHHHHHHHHHHTCC--------------------TTEEEEEEESCTTHHHHHHHHHHCT-------------------TC
T ss_pred             HHHHHHHHHHhCCC--------------------CCceEEEEcCCchHHHHHHHHhccC-------------------CC
Confidence            78899999999997                    3345788 69999999888765321                   11


Q ss_pred             eEEEecCCCchHHHHHHH---HcCCeEEEEecC--CCCC-cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-ccHH
Q psy1596         243 LVAYCSDQAHSSVEKAGL---IGLVKMRYIESD--DKLS-LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-DNLE  315 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d--~~g~-md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-Dpl~  315 (375)
                      ..+++....|++. ++..   -.| +++.||++  ++|. +++++++++|+++      +.+|+.+..+|.+|.+ +|++
T Consensus       116 d~v~~~~~~~~~~-~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~------t~lV~~~h~et~tG~~i~pi~  187 (386)
T 3qm2_A          116 TTADYVDAGYWAA-SAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDN------AAYLHYCPNETIDGIAIDETP  187 (386)
T ss_dssp             CEEEEEESSHHHH-HHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTT------CSCEEECSEETTTTEECCCCC
T ss_pred             CeEEEEeCCHHHH-HHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCC------CcEEEEECCcCCcCEecCchh
Confidence            2333333444443 2222   224 78999988  6776 8888888777654      3368888899999995 9999


Q ss_pred             HHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|+     +|+++|||++++.+....+     ++.+   |.+++++|||++ |.|+|+||
T Consensus       188 ~i~-----~g~~~~vDa~qs~g~~pid-----v~~~---~~~~~s~hK~lG-P~G~g~l~  233 (386)
T 3qm2_A          188 DFG-----PEVVVTADFSSTILSAPLD-----VSRY---GVIYAGAQKNIG-PAGLTLVI  233 (386)
T ss_dssp             CCC-----TTCCEEEECTTTTTSSCCC-----GGGC---SEEEEETTTTTC-CTTEEEEE
T ss_pred             hhc-----CCCEEEEEcccccCCCCCC-----cccc---CEEEEecccccC-CCccEEEE
Confidence            986     7999999999999876442     1122   557799999996 99999986

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.45  E-value=5.2e-13  Score=132.93  Aligned_cols=150  Identities=16%  Similarity=0.128  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++|++|+..++. ...                   ++.
T Consensus        70 ~~l~~~la~~~g~~-----------------------~~i~~~sG~~ai~~~~~-l~~-------------------~gd  106 (403)
T 3cog_A           70 NCLEKAVAALDGAK-----------------------YCLAFASGLAATVTITH-LLK-------------------AGD  106 (403)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHT-TSC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECCHHHHHHHHHH-HhC-------------------CCC
Confidence            66777888888765                       35778888888877765 211                   345


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..|.+....+    ...|.+++.++.+     |+++|+++|++.      +.+|+++.+++++|.+.|+++|++
T Consensus       107 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~  175 (403)
T 3cog_A          107 QIICMDDVYGGTNRYFRQVASEFGLKISFVDCS-----KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAH  175 (403)
T ss_dssp             EEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             EEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHH
Confidence            7889999999876654    2457888888875     899999988643      457888999999999999999999


Q ss_pred             HHHhcC-CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         320 ICEKEG-LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       320 ia~~~~-iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                      +|+++| +++++|++|+.+....|-     . + .+|.++.++||+++.|-+  +|++
T Consensus       176 la~~~g~~~livD~~~~~~~~~~~~-----~-~-~~div~~S~sK~~~g~~~~~~G~v  226 (403)
T 3cog_A          176 IVHKHGDIILVVDNTFMSPYFQRPL-----A-L-GADISMYSATKYMNGHSDVVMGLV  226 (403)
T ss_dssp             HHTSSSCCEEEEECTTTCTTTCCTT-----T-T-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred             HHHHcCCCEEEEECCCcccccCCcc-----c-c-CCeEEEEcChhhccCCCCCeEEEE
Confidence            999999 999999999987543221     1 1 479999999999998876  3665

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.45  E-value=1.4e-12  Score=129.80  Aligned_cols=184  Identities=14%  Similarity=0.016  Sum_probs=125.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+++..|.+.++.  +.+.          .....++|+|+++++..++.+..+               
T Consensus        78 ~G~~~lr~~ia~~l~~~~g~~~~~~--~~~~----------~~~~i~~t~G~~~al~~~~~~l~~---------------  130 (425)
T 2r2n_A           78 AGIPELLSWLKQLQIKLHNPPTIHY--PPSQ----------GQMDLCVTSGSQQGLCKVFEMIIN---------------  130 (425)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCTTTTS--CGGG----------TCEEEEEESSHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCccc--cccC----------CcCcEEEeCcHHHHHHHHHHHhCC---------------
Confidence            4556677889999999889872000  0000          024689999999999888776532               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhh------cCCccEEEEE-EcCCCCcc
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKK------KHLIPFFVCG-TLGTTGAC  309 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~------~g~~p~~Vv~-t~GtT~tG  309 (375)
                          ++..|++.+.+|.++...+...|.+++.||.++++ +|+++|++++++...      .+..+.+|++ ..++++||
T Consensus       131 ----~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG  205 (425)
T 2r2n_A          131 ----PGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTG  205 (425)
T ss_dssp             ----TTCEEEEESSCCHHHHHHHGGGTCEEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTC
T ss_pred             ----CCCEEEEeCCCcHHHHHHHHHcCCEEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCC
Confidence                34578899999999999888888899999987665 999999999963210      0112445544 56789999


Q ss_pred             cccc---HHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         310 AFDN---LEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       310 avDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+-+   +++|+++|++||+++++|++|+...+-.   +.+.. +. -...+.+..+++|+++.-+-+|.+
T Consensus       206 ~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~-~~-~~~~~i~~~s~SK~~~~GlRiG~~  274 (425)
T 2r2n_A          206 NSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS-MD-VDGRVIRADSFSKIISSGLRIGFL  274 (425)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGG-GC-TTSCEEEEEESTTTTCSTTCCEEE
T ss_pred             CcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccc-cC-CCCCEEEEccchhhccCccceEEE
Confidence            9865   5599999999999999999998542211   11111 11 112356778999998622234554

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.44  E-value=5e-13  Score=131.32  Aligned_cols=162  Identities=11%  Similarity=0.023  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .+++.+.+++++++|.+.                      ..++++|||+|+..++.++..                   
T Consensus        78 ~~~~~a~~~~~~~~~~~~----------------------~~v~~~~Gs~a~~~al~~~~~-------------------  116 (425)
T 3ecd_A           78 EVEALAIERVKRLFNAGH----------------------ANVQPHSGAQANGAVMLALAK-------------------  116 (425)
T ss_dssp             HHHHHHHHHHHHHHTCSE----------------------EECCCSSHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHHHHhCCCC----------------------ceeecCchHHHHHHHHHHccC-------------------
Confidence            344556688999998771                      235699999999888776521                   


Q ss_pred             CceEEEecCCCchHH-HHHHH--HcCC--eEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         241 SRLVAYCSDQAHSSV-EKAGL--IGLV--KMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv-~kaa~--lg~~--~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                      ++..|++++.+|.+. ..++.  +.+.  +++.++.+ +++.+|+++|+++|++..     +.+|+++.++  .|...++
T Consensus       117 ~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~~~~~~l  189 (425)
T 3ecd_A          117 PGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHK-----PSLIIAGFSA--YPRKLDF  189 (425)
T ss_dssp             TTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEEEECSC--CCSCCCH
T ss_pred             CCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcC-----CcEEEEcccc--CCCcCCH
Confidence            345788999999883 33332  3343  45566665 458899999999997532     3366666443  3789999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++|.++|++||++|++|++|+.+........   ..++.+|.++.++||++..|.+ |++
T Consensus       190 ~~i~~l~~~~~~~li~De~~~~g~~~~~~~~---~~~~~~di~~~s~sK~l~g~~~-g~~  245 (425)
T 3ecd_A          190 ARFRAIADSVGAKLMVDMAHIAGVIAAGRHA---NPVEHAHVVTSTTHKTLRGPRG-GFV  245 (425)
T ss_dssp             HHHHHHHHHHTCEEEEECGGGHHHHHTTSSC---CGGGTCSEEEEESSGGGCCCSC-EEE
T ss_pred             HHHHHHHHHcCCEEEEECcChHhhhhccccc---CchhcCcEEEecCCcccCCCCc-EEE
Confidence            9999999999999999999766543322111   1123469999999999877754 543

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.44  E-value=4.7e-14  Score=135.84  Aligned_cols=161  Identities=11%  Similarity=-0.063  Sum_probs=118.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCCh-HHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTA-SESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGG-T~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      .+...+.+++.+++++++|.+                    ++...++|+|+ |+++..++.+....          +  
T Consensus        44 ~~~~~~~~~l~~~la~~~g~~--------------------~~~~v~~~~g~gt~al~~~~~~l~~~----------~--   91 (360)
T 1w23_A           44 QSYEEVHEQAQNLLRELLQIP--------------------NDYQILFLQGGASLQFTMLPMNLLTK----------G--   91 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCC--------------------TTEEEEEESSHHHHHHHHHHHHHCCT----------T--
T ss_pred             HHHHHHHHHHHHHHHHHhCCC--------------------CCceEEEECCcchHHHHHHHHHhcCC----------C--
Confidence            445556688999999999986                    33468999998 99988877654321          0  


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHH-HHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIE-AIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~-aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                          .+..+|+++..+|++... +...| +++.||+++ +|.+|+++|++ +|++.      +.+|+.+.++|++|.+-+
T Consensus        92 ----~~g~~vi~~~~~~~~~~~-~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~------~k~v~~~~~~nptG~~~~  159 (360)
T 1w23_A           92 ----TIGNYVLTGSWSEKALKE-AKLLG-ETHIAASTKANSYQSIPDFSEFQLNEN------DAYLHITSNNTIYGTQYQ  159 (360)
T ss_dssp             ----CEEEEEECSHHHHHHHHH-HHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTT------EEEEEEESEETTTTEECS
T ss_pred             ----CcccEEEecchhHHHHHH-HHHhC-CeEEeecccccCcCCccchHhhccCCC------CCEEEEeCCCCCcceecc
Confidence                124578888889988544 44456 999999875 67799999988 77432      557888889999999844


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                        +   |++++|+++++|+||+.+....+     +..   .|.++.++||+++ |.|+|.++
T Consensus       160 --~---i~~~~~~~li~D~a~~~~~~~~~-----~~~---~di~~~s~sK~~~-~~G~G~~~  207 (360)
T 1w23_A          160 --N---FPEINHAPLIADMSSDILSRPLK-----VNQ---FGMIYAGAQKNLG-PSGVTVVI  207 (360)
T ss_dssp             --S---CCCCCSSCEEEECTTTTTSSCCC-----GGG---CSEEEEETTTTTS-CTTCEEEE
T ss_pred             --c---ccccCCceEEEechhhcCCCCcC-----ccc---CCEEEEEcccccC-CCCcEEEE
Confidence              3   33489999999999988754221     112   2899999999876 77888763

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.44  E-value=6e-14  Score=139.54  Aligned_cols=157  Identities=15%  Similarity=-0.085  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE-eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF-QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf-tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ++-+++++.+++++|.+                    +....+| |+|||+++..++......                 
T Consensus        58 ~~~~~ar~~la~ll~~~--------------------~~~evif~t~~~T~a~n~a~~~l~~~-----------------  100 (377)
T 3e77_A           58 KIINNTENLVRELLAVP--------------------DNYKVIFLQGGGCGQFSAVPLNLIGL-----------------  100 (377)
T ss_dssp             HHHHHHHHHHHHHHTCC--------------------TTEEEEEESSHHHHHHHHHHHHHGGG-----------------
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCCeEEEEcCchHHHHHHHHHhccCC-----------------
Confidence            44478899999999997                    3346788 589999988877654220                 


Q ss_pred             cCceEEEecCCCchHHHHHHHH---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLI---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      .++..+++....|++. +++.+   .|..++.+|.+.++..+++.++.+++++      +.+|..+..+|.+|.+.|+  
T Consensus       101 ~~Gd~v~~~~~g~~~~-~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~------t~lV~~~h~et~tG~~~pi--  171 (377)
T 3e77_A          101 KAGRCADYVVTGAWSA-KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPD------ASYVYYCANETVHGVEFDF--  171 (377)
T ss_dssp             STTCEEEECCCSHHHH-HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTT------CSCEEEESEETTTTEECSS--
T ss_pred             CCCCeEEEEECCHHHH-HHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCC------ccEEEEeCccCchheEchh--
Confidence            0123566666777764 44432   3456666787767778887776655443      3478888999999999998  


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                         ||+++|+++|||++++.+....+     +.   ..|.+++++|||++ |.|+|++|
T Consensus       172 ---i~~~~~~~~~vD~~q~~g~~~id-----~~---~~~~~~~s~~K~~g-p~G~g~l~  218 (377)
T 3e77_A          172 ---IPDVKGAVLVCDMSSNFLSKPVD-----VS---KFGVIFAGAQKNVG-SAGVTVVI  218 (377)
T ss_dssp             ---CCCCTTCCEEEECTTTTTSSCCC-----GG---GCSEEEEEGGGTTS-CTTCEEEE
T ss_pred             ---hhccCCCEEEEEcccccCCCCCc-----hh---hcCEEEEecccccC-CCccEEEE
Confidence               57889999999999999876432     11   22568999999995 99999986

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.44  E-value=3.4e-13  Score=135.58  Aligned_cols=159  Identities=12%  Similarity=-0.012  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ...++++++++|.+.                      ..++++|||+||..++.+++.                   ++.
T Consensus        94 ~~a~~~la~~~g~~~----------------------~~v~~~sGs~a~~~a~~~~~~-------------------~Gd  132 (447)
T 3h7f_A           94 NLARDRAKALFGAEF----------------------ANVQPHSGAQANAAVLHALMS-------------------PGE  132 (447)
T ss_dssp             HHHHHHHHHHHTCSE----------------------EECCCSSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHcCCCc----------------------eEEEeCCHHHHHHHHHHHhcC-------------------CCC
Confidence            333499999999871                      234488999999888876542                   345


Q ss_pred             EEEecCCCchH-HHHHH--HH--cCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         244 VAYCSDQAHSS-VEKAG--LI--GLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~S-v~kaa--~l--g~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      .|++++.+|.+ +..+.  .+  ....++.++.+ +++.+|+++|++++++..     |.+|+++.+++.++.  ++++|
T Consensus       133 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~i  205 (447)
T 3h7f_A          133 RLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAAF  205 (447)
T ss_dssp             EEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHHH
T ss_pred             EEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHHH
Confidence            78888888866 22221  12  23456666765 578899999999997542     336666666665554  99999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +++|+++|++||+|++|+.+......+   ...++.+|.++.++||+++.|.+ |++
T Consensus       206 ~~l~~~~g~lli~Dea~~~g~~~~g~~---~~~~~~~di~~~s~sK~l~G~~g-G~i  258 (447)
T 3h7f_A          206 RSIADEVGAKLLVDMAHFAGLVAAGLH---PSPVPHADVVSTTVHKTLGGGRS-GLI  258 (447)
T ss_dssp             HHHHHHHTCEEEEECTTTHHHHHTTSS---CCSTTTCSEEEEESSGGGCCCSC-EEE
T ss_pred             HHHHHHcCCEEEEECCchhhhhcCCCC---CCCCCCCcEEEecCCcCCCCCCe-EEE
Confidence            999999999999999986543221111   11124579999999999887766 554

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.44  E-value=8.9e-13  Score=128.74  Aligned_cols=146  Identities=11%  Similarity=-0.044  Sum_probs=109.4

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcC
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLR  278 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md  278 (375)
                      ..++|+|||+++..++......                 .++..|+++..+|.++...+...|.+++.+|.  ++++.+|
T Consensus        97 ~i~~t~g~~~a~~~~~~~~~~~-----------------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  159 (397)
T 3fsl_A           97 ATIQTLGGSGALKVGADFLKRY-----------------FPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVR  159 (397)
T ss_dssp             EEEEESHHHHHHHHHHHHHHHH-----------------CTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEEC
T ss_pred             EEEEcCCcHHHHHHHHHHHHhc-----------------CCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCc
Confidence            6799999999998886433211                 13457889999999999998888889999998  5678999


Q ss_pred             HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccc----hhhhhhhcCC
Q psy1596         279 GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC----PEFRKWLAGV  351 (375)
Q Consensus       279 ~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~----~~~~~~~~gi  351 (375)
                      +++|++++++..   ....+++.+.++++||.+   +++++|+++|+++|+++++|++|+....-.    +...... +.
T Consensus       160 ~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~  235 (397)
T 3fsl_A          160 FNDLLATLKTLQ---AGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIA-SA  235 (397)
T ss_dssp             HHHHHHHHTTCC---TTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHH-HT
T ss_pred             HHHHHHHHHhCC---CCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHH-hc
Confidence            999999997431   124577778899999998   778899999999999999999998765321    1111111 11


Q ss_pred             CcccEEEEcCcccCCC
Q psy1596         352 EYANSIAFNPSKWLMV  367 (375)
Q Consensus       352 e~aDSi~~d~HK~l~~  367 (375)
                      ..-..+..+++|.++.
T Consensus       236 ~~~~i~~~S~SK~~~~  251 (397)
T 3fsl_A          236 GLPALVSNSFSKIFSL  251 (397)
T ss_dssp             TCCEEEEEECTTTTTC
T ss_pred             CCCEEEEecccccccC
Confidence            2235667789998764

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.43  E-value=2.7e-12  Score=122.31  Aligned_cols=156  Identities=13%  Similarity=-0.003  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++.+++++|.+.                     ...++|+|+|+++..++.+.                     ++.
T Consensus        54 ~~lr~~la~~~~~~~---------------------~~i~~t~G~~~~l~~~~~~~---------------------~gd   91 (337)
T 3p1t_A           54 PRVMRKLAEHFSCPE---------------------DNLMLVRGIDECFDRISAEF---------------------SSM   91 (337)
T ss_dssp             HHHHHHHHHHHTSCG---------------------GGEEEESHHHHHHHHHHHHS---------------------TTS
T ss_pred             HHHHHHHHHHhCcCH---------------------HHEEEeCCHHHHHHHHHHhc---------------------CCC
Confidence            677888888888761                     35899999999988776543                     123


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|++++.+|.++...+...|.+++.+|.++++.+|+++|+++.        .+.+|+.+.+++++|.+-|+++|.++|++
T Consensus        92 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~  163 (337)
T 3p1t_A           92 RFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVS--------RDDCVVLANPSNPTGQALSAGELDQLRQR  163 (337)
T ss_dssp             EEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTCC--------TTEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             eEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence            6889999999999988888899999999888999999998751        14588888999999999999999999999


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                      +++ +++|++|+......+.    .......+.+..++||+++ ....+|.+
T Consensus       164 ~~~-~ivDea~~~~~~~~~~----~~~~~~~~i~~~S~sK~~g~~G~r~G~~  210 (337)
T 3p1t_A          164 AGK-LLIDETYVDYSSFRAR----GLAYGENELVFRSFSKSYGLAGLRLGAL  210 (337)
T ss_dssp             CSE-EEEECTTGGGSSCSSS----CCCCBTTEEEEEESSSTTCCTTTCCEEE
T ss_pred             CCc-EEEECCChhhcccccc----ccccCCCEEEEeeCchhccCcchheEEE
Confidence            997 6669999864321110    1122345788999999986 44556654

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.43  E-value=1.2e-12  Score=126.75  Aligned_cols=158  Identities=11%  Similarity=-0.025  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                     ....++|+|||+++..++.+...                   ++.
T Consensus        68 ~~lr~~la~~~g~~---------------------~~~i~~t~g~~~al~~~~~~l~~-------------------~gd  107 (360)
T 3hdo_A           68 QKLREVAGELYGFD---------------------PSWIIMANGSDEVLNNLIRAFAA-------------------EGE  107 (360)
T ss_dssp             HHHHHHHHHHHTCC---------------------GGGEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCcC---------------------cceEEEcCCHHHHHHHHHHHHhC-------------------CCC
Confidence            56778888888865                     23689999999999988875422                   235


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..+|.++..++...|.+++.+|.++++.+  ++|++++        .+.+|+.+.+++++|.+-|+++|.++|++
T Consensus       108 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~  177 (360)
T 3hdo_A          108 EIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--AGFPERY--------EGKVFFLTTPNAPLGPSFPLEYIDELARR  177 (360)
T ss_dssp             EEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--TTCCSSB--------CSSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             EEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--HHHHhhc--------CCCEEEEeCCCCCCCCCcCHHHHHHHHHH
Confidence            7889999999999998888889999999877766  4443221        13377778899999999999999999999


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +|+++++|++|+...--.. . ..... ...+.+..++||+++.| ..+|.+
T Consensus       178 ~~~~li~De~~~~~~~~~~-~-~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~  226 (360)
T 3hdo_A          178 CAGMLVLDETYAEFAESNA-L-ELVRR-HENVVVTRTLSKSYSLAGMRIGLA  226 (360)
T ss_dssp             BSSEEEEECTTGGGSSCCC-T-HHHHH-CSSEEEEEESTTTTSCTTSCCEEE
T ss_pred             CCCEEEEECChHhhCCcch-h-HHhcc-CCCEEEEecchHhhcCCccceeeE
Confidence            9999999999986321100 0 01110 12356778999998643 555654

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.43  E-value=5.6e-13  Score=132.29  Aligned_cols=176  Identities=9%  Similarity=-0.049  Sum_probs=126.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCc---EEEeCChHHHHHHHHHHHHHHHHHHhhccCCc
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNF---ITFQTTASESTLICLLAGRTEAIRKYQQSHPE  233 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~---GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~  233 (375)
                      .|..++++.+.+|+.+.. .+.                   ++..   .++|+|||+++..++.+..+            
T Consensus        88 ~g~~~lr~~ia~~~~~~~-~~~-------------------~~~~~~~i~~t~g~~~al~~~~~~l~~------------  135 (430)
T 2x5f_A           88 QGIEELRDLWQQKMLRDN-PEL-------------------SIDNMSRPIVTNALTHGLSLVGDLFVN------------  135 (430)
T ss_dssp             TCCHHHHHHHHHHHHHHC-TTC-------------------CGGGBCCCEEESHHHHHHHHHHHHHCC------------
T ss_pred             CCCHHHHHHHHHHHhccC-ccc-------------------CCCccceEEEcCCchHHHHHHHHHHhC------------
Confidence            345666677777776653 331                   2234   79999999999888876532            


Q ss_pred             chhhhhcCceEEEecCCCchHHHHHHHH-cCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         234 LEHAEINSRLVAYCSDQAHSSVEKAGLI-GLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       234 ~~~~~~~~~~vV~~S~~aH~Sv~kaa~l-g~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                             ++..|++++.+|.++...+.. .|.+++.+|.++ ++.+|+++|+++|++.   +..+.+|+.+.++++||.+
T Consensus       136 -------~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~  205 (430)
T 2x5f_A          136 -------QDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYT  205 (430)
T ss_dssp             -------TTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCC
T ss_pred             -------CCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCc
Confidence                   245788999999999988877 888999999865 4789999999999752   1125577778889999998


Q ss_pred             cc---HHHHHHHHHh-----cCCEEEEecccccCcccc---hhhhhhhcCCCcc---cEEEEcCcccCCCC-Ccceee
Q psy1596         312 DN---LEELGPICEK-----EGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYA---NSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       312 Dp---l~eI~~ia~~-----~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~a---DSi~~d~HK~l~~P-~~~g~l  374 (375)
                      -+   +++|+++|++     +|+++++|++|+.+..-.   +.....+.++...   +.+..++||+++.| +.+|.+
T Consensus       206 ~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~  283 (430)
T 2x5f_A          206 PTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFM  283 (430)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEE
T ss_pred             CCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEE
Confidence            66   9999999999     999999999998764321   1111012222223   56688999998645 235654

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.43  E-value=6.5e-13  Score=128.71  Aligned_cols=164  Identities=13%  Similarity=0.073  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                      ...++|+|||+|+..++.+++... .+ +.          ..+.
T Consensus        73 ~~l~~~la~~~g~~----------------------~~v~~~~g~t~a~~~~~~~~~~~~-~~-~~----------~g~~  118 (375)
T 2eh6_A           73 EELAHKLVKHFWTE----------------------GKVFFANSGTESVEAAIKLARKYW-RD-KG----------KNKW  118 (375)
T ss_dssp             HHHHHHHHHTSSSC----------------------EEEEEESSHHHHHHHHHHHHHHHH-HH-TT----------CCCC
T ss_pred             HHHHHHHHhhcCCC----------------------CeEEEeCchHHHHHHHHHHHHHHh-cc-CC----------CCCC
Confidence            56788999998874                      247999999999999988754321 00 00          0114


Q ss_pred             EEEecCCC-chHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         244 VAYCSDQA-HSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       244 vV~~S~~a-H~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                      .|++++.+ |.+...+..+++..            +..+|.     +|+++|+++|+++      +.+|+++..++++|.
T Consensus       119 ~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~------~~~v~~~~~~~~tG~  187 (375)
T 2eh6_A          119 KFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLDEE------TAGIIIEVIQGEGGV  187 (375)
T ss_dssp             EEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCCTT------EEEEEECSEETTTTS
T ss_pred             EEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhcCC------eEEEEEeCccCCCCC
Confidence            56676666 55555555554321            444543     5899999888642      457777888889999


Q ss_pred             ccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         311 FDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       311 vDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +.+    +++|+++|+++|+++++|++|++.......+.....+. .+|.++++  |+++.++++|.++
T Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~d~~s~S--K~~~~g~~~G~~~  253 (375)
T 2eh6_A          188 NEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNL-KPDVIALA--KGLGGGVPIGAIL  253 (375)
T ss_dssp             EECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSCCEEEE
T ss_pred             cCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCC-CCCEEEEc--ccccCCCCeEEEE
Confidence            977    99999999999999999999995322110011111132 36888888  8888888888763

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.42  E-value=8e-13  Score=129.63  Aligned_cols=172  Identities=10%  Similarity=-0.000  Sum_probs=123.9

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE--eCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF--QTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf--tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      |..++++++.+|+.+..|.+.                   ++...++  |+|||+|+..++.+.+...            
T Consensus        72 g~~~lr~~ia~~~~~~~~~~~-------------------~~~~i~~v~t~G~~~al~~~~~~l~~~~------------  120 (401)
T 7aat_A           72 GLADFTRASAELALGENSEAF-------------------KSGRYVTVQGISGTGSLRVGANFLQRFF------------  120 (401)
T ss_dssp             CCHHHHHHHHHHHHCTTCHHH-------------------HTTCEEEEEEEHHHHHHHHHHHHHHHHC------------
T ss_pred             CCHHHHHHHHHHhcCCCcccc-------------------ccCceEEEecCcchHHHHHHHHHHHHhc------------
Confidence            455666777777766555431                   2345666  9999999998877654311            


Q ss_pred             hhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         236 HAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                          .++..|++++.+|.++...++..|.+++.+|.+  +++.+|++.|++.+++. .  ..+.+|+.+.++|+||.+  
T Consensus       121 ----~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~--~~~~~v~i~~p~NPtG~~~~  193 (401)
T 7aat_A          121 ----KFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKI-P--EKSIILLHACAHNPTGVDPR  193 (401)
T ss_dssp             ----TTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTS-C--TTCEEEEESSSCTTTCCCCC
T ss_pred             ----cCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhC-C--CCcEEEEeCCCCCCCCCCCC
Confidence                134578999999999999988888899999974  47899999999988752 1  235678888899999954  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcccch-----hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFICP-----EFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~-----~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                       +++++|+++|++||+++++|.||+....-..     ..+... ....-..++.++||.++.|
T Consensus       194 ~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~  255 (401)
T 7aat_A          194 QEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFI-EQGIDVVLSQSYAKNMGLY  255 (401)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-HTTCCCEEEEECTTTSCCG
T ss_pred             HHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHH-hcCCcEEEEecCCcccccc
Confidence             7799999999999999999999987653211     111111 1122356789999987643

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.42  E-value=3.2e-13  Score=134.40  Aligned_cols=189  Identities=8%  Similarity=0.015  Sum_probs=122.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCc-ch
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPE-LE  235 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~-~~  235 (375)
                      .|..++++++.+|+.+.+|++.                   ++...+||+|||+|+..++.+....     + +.++ +.
T Consensus        83 ~g~~~lr~~ia~~l~~~~g~~~-------------------~~~~i~~t~G~t~al~~~~~~l~~~-----g-d~~~~~~  137 (444)
T 3if2_A           83 QGDSAFIDALVGFFNRHYDWNL-------------------TSENIALTNGSQNAFFYLFNLFGGA-----F-VNEHSQD  137 (444)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESSHHHHHHHHHHHSSEE-----E-ECC----
T ss_pred             CCCHHHHHHHHHHHHhhcCCCC-------------------CHHHEEEecCcHHHHHHHHHHHhCC-----C-ccccccc
Confidence            4566778889999988888874                   3457899999999999888765320     0 0000 00


Q ss_pred             hhhhcCceEEEec-CCCchHHHHHH----HH--cCCeEEEEecCC-C----CCcCHHHHHHHHHHhhhcCCccEEEEEEc
Q psy1596         236 HAEINSRLVAYCS-DQAHSSVEKAG----LI--GLVKMRYIESDD-K----LSLRGDKLIEAIERDKKKHLIPFFVCGTL  303 (375)
Q Consensus       236 ~~~~~~~~vV~~S-~~aH~Sv~kaa----~l--g~~~v~~Vp~d~-~----g~md~e~Le~aI~~~~~~g~~p~~Vv~t~  303 (375)
                      ..+......|+++ ..+|.++..++    .+  .+..++.+++++ +    +.+|+++|++++++...   .+.+|+++.
T Consensus       138 ~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~---~~~~v~i~~  214 (444)
T 3if2_A          138 KESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEG---RIGAICCSR  214 (444)
T ss_dssp             ---CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTT---CEEEEEEES
T ss_pred             cccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCC---CceEEEeCC
Confidence            0000000035544 77777766543    12  356788888875 3    37999999998653211   255778888


Q ss_pred             CCCCcccccc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         304 GTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       304 GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +++++|.+-+   +++|+++|++||+++|+|++|+...... .+..........+.++.++||++.....+|++
T Consensus       215 p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~  287 (444)
T 3if2_A          215 PTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGII  287 (444)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEE
T ss_pred             CCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEE
Confidence            8999999877   8999999999999999999998532100 00111111224578899999985544666654

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.41  E-value=1.3e-13  Score=133.47  Aligned_cols=155  Identities=10%  Similarity=-0.099  Sum_probs=108.9

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCc-EEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNF-ITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~-GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      +..++.+++.+++++++|.+                    .... .++|+|||+++..++.+...               
T Consensus        46 ~~~~~~~~~~~~la~~~g~~--------------------~~~~~i~~t~g~t~a~~~~~~~l~~---------------   90 (362)
T 2c0r_A           46 VYEAVHNEAQARLLALLGNP--------------------TGYKVLFIQGGASTQFAMIPMNFLK---------------   90 (362)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC--------------------SSEEEEEESSHHHHHHHHHHHHHCC---------------
T ss_pred             HHHHHHHHHHHHHHHHhCCC--------------------CCcEEEEECCCchHHHHHHHHhcCC---------------
Confidence            34456689999999999987                    2223 35779999999888765421               


Q ss_pred             hhhcCceEEEecCCCchHH--HHHHHHcCCeEEEEecC--C-CC-CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         237 AEINSRLVAYCSDQAHSSV--EKAGLIGLVKMRYIESD--D-KL-SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv--~kaa~lg~~~v~~Vp~d--~-~g-~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                          ++..|++....|++.  ...++..| +++.|+.+  + .+ .+|.++++  |++      .+.+|+++.++|+||.
T Consensus        91 ----~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~  157 (362)
T 2c0r_A           91 ----EGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGA  157 (362)
T ss_dssp             ----TTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTE
T ss_pred             ----CCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccce
Confidence                234566665666663  34455556 88889876  2 22 35665553  322      2568888989999999


Q ss_pred             c-ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         311 F-DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       311 v-Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      + .|+++|      +|+|+|||+||+.+....        .++..|.++.++|||++ |.|+|+++
T Consensus       158 ~~~~l~~i------~~~~vivD~a~~~~~~~~--------~~~~~d~~~~s~~K~~g-~~G~G~l~  208 (362)
T 2c0r_A          158 QFKAFPDT------GSVPLIGDMSSDILSRPF--------DLNQFGLVYAGAQKNLG-PSGVTVVI  208 (362)
T ss_dssp             ECSSCCCC------TTSCEEEECTTTTTSSCC--------CGGGCSEEEEETTTTTC-CSSCEEEE
T ss_pred             eccccccc------CCCEEEEEChhhccCCcc--------chhHCcEEEEecccccc-CcCcEEEE
Confidence            5 888887      899999999998875321        12224999999999996 88888764

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.41  E-value=3.1e-12  Score=123.98  Aligned_cols=162  Identities=11%  Similarity=0.032  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+.                     ...++|+|||+++..++.+. .                    +.
T Consensus        62 ~~l~~~la~~~~~~~---------------------~~v~~~~g~~~al~~~~~~~-~--------------------gd   99 (364)
T 1lc5_A           62 FHLHQALARHHQVPA---------------------SWILAGNGETESIFTVASGL-K--------------------PR   99 (364)
T ss_dssp             HHHHHHHHHHHTSCG---------------------GGEEEESSHHHHHHHHHHHH-C--------------------CS
T ss_pred             HHHHHHHHHHHCcCH---------------------HHEEECCCHHHHHHHHHHHc-C--------------------CC
Confidence            566777777777751                     35899999999998887765 1                    13


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH-HHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG-DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~-e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~  319 (375)
                      .|++...+|.++..+++..|.+++.+|.+++..+++ +++.+.+.+      .+.+|+.+.+++++|.+-+   +++|++
T Consensus       100 ~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~  173 (364)
T 1lc5_A          100 RAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTP------DLDCLFLCTPNNPTGLLPERPLLQAIAD  173 (364)
T ss_dssp             EEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             eEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhccC------CCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence            688888999999999888888999999875222443 433333311      2446777888999999876   999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +|+++|+++++|++|+.+..-........ +....|.+..++||+++.| +.+|++
T Consensus       174 ~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~  228 (364)
T 1lc5_A          174 RCKSLNINLILDEAFIDFIPHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYL  228 (364)
T ss_dssp             HHHHHTCEEEEECTTGGGSTTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEE
T ss_pred             HhhhcCcEEEEECcChhhccCccchhhHh-ccCCCEEEEEECchhhcCCccceEEE
Confidence            99999999999999987542100001111 1123578889999998744 345654

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.41  E-value=5e-13  Score=132.49  Aligned_cols=143  Identities=13%  Similarity=0.090  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       ..+++++||+|+..++. ...                   ++.
T Consensus        58 ~~lr~~la~~~g~~-----------------------~~i~~~sGt~a~~~al~-~~~-------------------~gd   94 (393)
T 1n8p_A           58 ENLERAVAALENAQ-----------------------YGLAFSSGSATTATILQ-SLP-------------------QGS   94 (393)
T ss_dssp             HHHHHHHHHHTTCS-----------------------EEEEESCHHHHHHHHHH-TSC-------------------SSC
T ss_pred             HHHHHHHHHHhCCC-----------------------cEEEECChHHHHHHHHH-HcC-------------------CCC
Confidence            67888999998865                       35788888999988876 311                   234


Q ss_pred             EEEecCCCchHHHHHH----HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG----LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa----~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...|.+....+    ...|.+++.||.+     | ++|+++|++.      +.+|+++.+++++|.+.|+++|++
T Consensus        95 ~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~  162 (393)
T 1n8p_A           95 HAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL-----L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVAD  162 (393)
T ss_dssp             EEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH-----H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC-----h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHH
Confidence            6888889998766654    2356788888875     7 8888887532      457888889999999999999999


Q ss_pred             HHHhc----CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEKE----GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~----~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|+++    |+++|+|++|+.+....+  ..  .   .+|.++.++||+++.+
T Consensus       163 la~~~~~~~~~~livD~a~~~~~~~~~--~~--~---~~di~~~S~sK~~g~~  208 (393)
T 1n8p_A          163 LIKKHAAGQDVILVVDNTFLSPYISNP--LN--F---GADIVVHSATKYINGH  208 (393)
T ss_dssp             HHHHHTTTTTCEEEEECTTTHHHHCCG--GG--G---TCSEEEEETTTTTTCS
T ss_pred             HHHHhCCCCCCEEEEeCCccccccCCH--HH--c---CCeEEEEECcccccCC
Confidence            99999    999999999998754221  11  1   3699999999988744

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.40  E-value=6.6e-12  Score=122.58  Aligned_cols=153  Identities=15%  Similarity=-0.010  Sum_probs=109.4

Q ss_pred             cEEE--eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCC
Q psy1596         201 FITF--QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLS  276 (375)
Q Consensus       201 ~Gvf--tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~  276 (375)
                      ..+|  |+|||+|+..++.+.+..                 .++..|+++..+|.++..++...+.+++.+|.+  +++.
T Consensus        91 ~v~~~~~~g~~~a~~~~~~~~~~~-----------------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  153 (394)
T 2ay1_A           91 TTATLATVGGTGALRQALELARMA-----------------NPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRG  153 (394)
T ss_dssp             GEEEEEEEHHHHHHHHHHHHHHHH-----------------CTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTE
T ss_pred             cEEEEecCCchhHHHHHHHHHHhc-----------------CCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCc
Confidence            4677  999999999888776531                 023468888999999999887778889999985  6788


Q ss_pred             cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---cHHHHHHHHHhcCCEEEEecccccCcccc--h--hhhhhhc
Q psy1596         277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---NLEELGPICEKEGLWLHVDAAYAGSSFIC--P--EFRKWLA  349 (375)
Q Consensus       277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---pl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~--~~~~~~~  349 (375)
                      +|+++|++++++..   ....+++.+.++++||.+-   ++++|+++|+++|+++++|++|+.+..-.  +  ..... .
T Consensus       154 ~d~~~l~~~l~~~~---~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~  229 (394)
T 2ay1_A          154 VDFEGMKADLAAAK---KGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLI-A  229 (394)
T ss_dssp             ECHHHHHHHHHTCC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHH-H
T ss_pred             cCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHH-h
Confidence            99999999997531   1234667788999999884   57789999999999999999998764310  0  11111 1


Q ss_pred             CCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         350 GVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       350 gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      ....-..+..++||+++.| ..+|.+
T Consensus       230 ~~~~~~i~~~s~sK~~~~~G~riG~~  255 (394)
T 2ay1_A          230 SRIPEVLIAASCSKNFGIYRERTGCL  255 (394)
T ss_dssp             HHCSSEEEEEECTTTTTCGGGCEEEE
T ss_pred             hcCCCEEEEEeccCCCcCcCCccceE
Confidence            1111134567899988643 334554

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.40  E-value=1.7e-12  Score=127.37  Aligned_cols=166  Identities=15%  Similarity=0.091  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.+++++++|.+                       ..+||+|||+|+..++.+++.....  ..  +       .
T Consensus        82 ~~~~~l~~~la~~~g~~-----------------------~v~~~~gg~~a~~~al~~~~~~~~~--~~--~-------~  127 (397)
T 2ord_A           82 RPQMELAELLSKNTFGG-----------------------KVFFANTGTEANEAAIKIARKYGKK--KS--E-------K  127 (397)
T ss_dssp             HHHHHHHHHHHHTTTSC-----------------------EEEEESSHHHHHHHHHHHHHHHHHH--HC--T-------T
T ss_pred             HHHHHHHHHHHHhcCCC-----------------------eEEEeCCHHHHHHHHHHHHHHHhhc--CC--C-------C
Confidence            34478889999988743                       4799999999999999877642110  00  0       0


Q ss_pred             CceEEEecCCCchHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA  308 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t  308 (375)
                      ++.+|+.+..-|.+...++.+.+.+            ++.+|.+     |+++|++++++.      +.+|+++.+++++
T Consensus       128 ~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~npt  196 (397)
T 2ord_A          128 KYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSED------VCAVFLEPIQGES  196 (397)
T ss_dssp             CCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCTT------EEEEEECSEECTT
T ss_pred             CceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhhcC------eEEEEEecccCCC
Confidence            1235555556677777677665544            7777753     899999988642      5578888899999


Q ss_pred             cc----cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         309 CA----FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       309 Ga----vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |.    .+++++|+++|++||++|++|++|++.............++ .+|.+++  +|+++.++.+|.+
T Consensus       197 G~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~r~G~~  263 (397)
T 2ord_A          197 GIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLTT--AKGLGGGVPIGAV  263 (397)
T ss_dssp             TCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEE
T ss_pred             CcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCC-CCCeeee--ccccCCCcCeEEE
Confidence            98    48999999999999999999999985322111111011132 3687766  7999876777765

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.40  E-value=2.2e-12  Score=126.96  Aligned_cols=153  Identities=12%  Similarity=0.056  Sum_probs=110.8

Q ss_pred             CcEEE--eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc-----eEEEecCCCchHHHHHHHHcCCe-EEEEec
Q psy1596         200 NFITF--QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR-----LVAYCSDQAHSSVEKAGLIGLVK-MRYIES  271 (375)
Q Consensus       200 ~~Gvf--tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~-----~vV~~S~~aH~Sv~kaa~lg~~~-v~~Vp~  271 (375)
                      ...++  |+|||+|+..++..++..                 .++     ..|+++..+|.++..++...|.+ ++.+|.
T Consensus        98 ~~v~~~~t~gg~~a~~~~~~~~~~~-----------------~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~  160 (412)
T 1ajs_A           98 KRVGGVQSLGGTGALRIGAEFLARW-----------------YNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRY  160 (412)
T ss_dssp             TCEEEEEEEHHHHHHHHHHHHHHHH-----------------SSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEEC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHHh-----------------CcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEee
Confidence            35788  999999999887544321                 023     46888999999999988887888 999998


Q ss_pred             C--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccc---h-
Q psy1596         272 D--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC---P-  342 (375)
Q Consensus       272 d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~-  342 (375)
                      +  +++.+|+++|++++++.   +....+|+.+.++++||.+   +++++|+++|+++|+++++|++|.+...-.   + 
T Consensus       161 ~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~  237 (412)
T 1ajs_A          161 WDTEKRGLDLQGFLSDLENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDA  237 (412)
T ss_dssp             EETTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHT
T ss_pred             ecCCCCccCHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccc
Confidence            3  67889999999999753   1124567778899999998   678899999999999999999998764321   1 


Q ss_pred             -hhhhhhcCCCcccEEEEcCcccCCCCCc--ceee
Q psy1596         343 -EFRKWLAGVEYANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       343 -~~~~~~~gie~aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                       .+.... ....-+.+..++||.++. .|  +|.+
T Consensus       238 ~~~~~~~-~~~~~~i~~~s~sK~~~~-~G~riG~~  270 (412)
T 1ajs_A          238 WAIRYFV-SEGFELFCAQSFSKNFGL-YNERVGNL  270 (412)
T ss_dssp             HHHHHHH-HTTCCEEEEEECTTTSCC-GGGCEEEE
T ss_pred             hHHHHHh-ccCCcEEEEEecccccCC-CCcceEEE
Confidence             112111 111123678999997754 44  5554

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.40  E-value=2.4e-12  Score=125.07  Aligned_cols=161  Identities=13%  Similarity=0.038  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc-
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR-  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~-  242 (375)
                      .++++.+++++|.+.                     ...++|+|||+++..++.+...                   ++ 
T Consensus        61 ~~lr~~la~~~~~~~---------------------~~v~~~~G~~~ai~~~~~~~~~-------------------~g~  100 (356)
T 1fg7_A           61 KAVIENYAQYAGVKP---------------------EQVLVSRGADEGIELLIRAFCE-------------------PGK  100 (356)
T ss_dssp             HHHHHHHHHHHTSCG---------------------GGEEEESHHHHHHHHHHHHHCC-------------------TTT
T ss_pred             HHHHHHHHHHhCCCh---------------------HHEEEcCCHHHHHHHHHHHHhC-------------------CCC
Confidence            567778888888761                     3589999999999888776532                   23 


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGP  319 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~  319 (375)
                      ..|++++.+|.++..+++..|.+++.+|.++++.+|+++|+++++ +      +.+|+.+.++++||.+-+   +++|++
T Consensus       101 d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~  173 (356)
T 1fg7_A          101 DAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLE  173 (356)
T ss_dssp             CEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             CEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence            578899999999999988778899999998888899999998875 2      447777889999999865   455556


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      +|+ +|+++++|++|+.+.. .+........ ...+.+..++||+++.| ..+|.+
T Consensus       174 ~~~-~~~~li~De~~~~~~~-~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~  226 (356)
T 1fg7_A          174 LTR-GKAIVVADEAYIEFCP-QASLAGWLAE-YPHLAILRTLSKAFALAGLRCGFT  226 (356)
T ss_dssp             HHT-TTCEEEEECTTGGGSG-GGCSGGGTTT-CTTEEEEEESSSTTCCGGGCCEEE
T ss_pred             hCC-CCCEEEEEccchhhcC-CCcHHHHHhh-CCCEEEEecchHhhcCchhhhEEE
Confidence            666 9999999999987541 1111111111 12467788999988643 235554

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.40  E-value=3.3e-12  Score=124.65  Aligned_cols=146  Identities=11%  Similarity=0.006  Sum_probs=108.1

Q ss_pred             cEEE--eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCC
Q psy1596         201 FITF--QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLS  276 (375)
Q Consensus       201 ~Gvf--tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~  276 (375)
                      ..++  |+|||+|+..++.+++..                 .++..|++...+|.++..+++..+.+++.+|.+  +++.
T Consensus        94 ~v~~~~~~g~~~a~~~~~~~~~~~-----------------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  156 (396)
T 2q7w_A           94 RARTAQTPGGTGALRVAADFLAKN-----------------TSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT  156 (396)
T ss_dssp             CEEEEEESHHHHHHHHHHHHHHHH-----------------SCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTE
T ss_pred             cEEEEecccchhhHHHHHHHHHHh-----------------CCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCC
Confidence            4677  999999999888765431                 134578899999999999988888899999985  6788


Q ss_pred             cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccc----hhhhhhhc
Q psy1596         277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC----PEFRKWLA  349 (375)
Q Consensus       277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~----~~~~~~~~  349 (375)
                      +|+++|++++++..   ....+++.+.++++||.+   +++++|+++|+++|+++++|++|+....-.    ....... 
T Consensus       157 ~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-  232 (396)
T 2q7w_A          157 LDFDALINSLNEAQ---AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFA-  232 (396)
T ss_dssp             ECHHHHHHHHTTCC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHH-
T ss_pred             cCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHH-
Confidence            99999999996531   124567778899999987   467789999999999999999998764310    0111111 


Q ss_pred             CCCcccEEEEcCcccCCC
Q psy1596         350 GVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       350 gie~aDSi~~d~HK~l~~  367 (375)
                      ....-+.+..++||.++.
T Consensus       233 ~~~~~~i~~~s~sK~~~~  250 (396)
T 2q7w_A          233 AMHKELIVASSYSXNFGL  250 (396)
T ss_dssp             HHCSCEEEEEECTTTTTC
T ss_pred             hcCCcEEEEEeccccccc
Confidence            111124678899998763

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.39  E-value=1.7e-12  Score=127.57  Aligned_cols=155  Identities=12%  Similarity=0.002  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      .+++++.+++++++|.+                    ++...++|+|||+++..++.+.  .                  
T Consensus        58 ~~~~~~~~~~a~~~g~~--------------------~~~~~~~~~ggt~a~~~~~~~~--~------------------   97 (374)
T 2aeu_A           58 YFAEKVNEYGLKHLGGD--------------------ENDKCVGFNRTSSAILATILAL--K------------------   97 (374)
T ss_dssp             HHHHHHHHHHHHHHTCC--------------------TTEEEEEESSHHHHHHHHHHHH--C------------------
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CcceEEEEcChHHHHHHHHHhC--C------------------
Confidence            45577888888999884                    1235799999999999888754  1                  


Q ss_pred             CceEEEecCC---CchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEE-EEEEcCCCCcc-ccccHH
Q psy1596         241 SRLVAYCSDQ---AHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFF-VCGTLGTTGAC-AFDNLE  315 (375)
Q Consensus       241 ~~~vV~~S~~---aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~-Vv~t~GtT~tG-avDpl~  315 (375)
                       +..|+++..   .|+++.+++...|.+++.+       +|+++|+++ ++      .+.+ |+.+.+++++| ...+++
T Consensus        98 -gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~  162 (374)
T 2aeu_A           98 -PKKVIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFK  162 (374)
T ss_dssp             -CSEEEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHH
T ss_pred             -CCEEEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHH
Confidence             235777777   5667666666777788777       388888876 22      2456 77778889999 899999


Q ss_pred             HHHHHHHhcCCEEEEecccccCcccchhhhh-hhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGSSFICPEFRK-WLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~-~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +|.++|++||+++++|++|+.... .+.... ... . .+|.++.++||++..| ..|++
T Consensus       163 ~i~~l~~~~~~~li~De~~~~~~~-~~~~~~~~~~-~-~~di~~~S~sK~l~g~-~~G~~  218 (374)
T 2aeu_A          163 KVINTAKNKEAIVFVDDASGARVR-LLFNQPPALK-L-GADLVVTSTDKLMEGP-RGGLL  218 (374)
T ss_dssp             HHHHHHHHHTCCEEEECTTHHHHH-HHTTCCCHHH-H-TCSEEEEETTSSSSSC-SCEEE
T ss_pred             HHHHHHHHcCCEEEEECCcccccc-cccccCCccc-c-CCcEEEecCcccccCc-ceEEE
Confidence            999999999999999999987531 011110 011 1 2599999999997654 67765

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.39  E-value=2.1e-11  Score=122.48  Aligned_cols=148  Identities=14%  Similarity=-0.007  Sum_probs=107.1

Q ss_pred             CcEEE--eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEec-C
Q psy1596         200 NFITF--QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIES-D  272 (375)
Q Consensus       200 ~~Gvf--tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~-d  272 (375)
                      ...++  |+|||+|+..++......                 .++..|++++.+|.++...+.    ..|.+++.+|. +
T Consensus       118 ~~i~~~~t~ggt~al~l~~~~~~~~-----------------~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~  180 (448)
T 3meb_A          118 GRIASCQSLSGTGSLHIGFEFLHLW-----------------MPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLR  180 (448)
T ss_dssp             TCEEEEEESHHHHHHHHHHHHHHHH-----------------CTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBC
T ss_pred             CcEEEEECCcHHHHHHHHHHHHHHh-----------------CCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccc
Confidence            46788  999999987654322211                 134578999999999999888    78889999998 6


Q ss_pred             CC--CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccch-----
Q psy1596         273 DK--LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICP-----  342 (375)
Q Consensus       273 ~~--g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~-----  342 (375)
                      ++  +.+|+++|++++++..   ....+++.+.++|+||.+   +++++|+++|+++|+++++|.||++...-..     
T Consensus       181 ~~~~~~~d~e~l~~~l~~~~---~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~  257 (448)
T 3meb_A          181 KDGELEIDFSNTKKDIQSAP---EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAF  257 (448)
T ss_dssp             TTSCSSBCHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTH
T ss_pred             cccCCCcCHHHHHHHHHhCC---CCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCch
Confidence            54  8999999999997631   124577778889999987   4577799999999999999999987653211     


Q ss_pred             hhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         343 EFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       343 ~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ..+.... ...-..++.++||.++.|
T Consensus       258 ~~~~~~~-~~~~~i~~~S~SK~~g~~  282 (448)
T 3meb_A          258 AVRMFVD-AGVEVLVAQSFSKNFGLY  282 (448)
T ss_dssp             HHHHHHH-TTCCEEEEEECTTTSCCG
T ss_pred             hHHHHhh-cCCcEEEEecccccCCCc
Confidence            1111111 111235688999987643

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.39  E-value=2.4e-13  Score=134.39  Aligned_cols=153  Identities=10%  Similarity=-0.101  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE-eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF-QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf-tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ++-+++++.+++++|.+                    ++...+| |+|||+++..++.... .       +         
T Consensus        50 ~~~~~~r~~la~ll~~~--------------------~~~~v~f~t~~~T~a~n~~~~~~~-~-------~---------   92 (361)
T 3m5u_A           50 EVHFGAQEKAKKLYELN--------------------DDYEVLFLQGGASLQFAMIPMNLA-L-------N---------   92 (361)
T ss_dssp             HHHHHHHHHHHHHHTCC--------------------TTEEEEEESSHHHHHHHHHHHHHC-C-------S---------
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCceEEEEcCcHHHHHHHHHHhcC-C-------C---------
Confidence            44478899999999997                    3346788 9999999888776432 0       0         


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCC--cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLS--LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~--md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      ....+|+++..+|..+..+.+. |.+++.|+++.++.  ++++. +  |+++      +.+|.++..+|.+|.+-|  + 
T Consensus        93 ~~~~~i~~~~~~~~~~~~a~~~-G~~v~~~~~~~~g~~~~~~~~-~--l~~~------t~lv~~~~~e~~tG~~~~--~-  159 (361)
T 3m5u_A           93 GVCEYANTGVWTKKAIKEAQIL-GVNVKTVASSEESNFDHIPRV-E--FSDN------ADYAYICSNNTIYGTQYQ--N-  159 (361)
T ss_dssp             SCEEEEECSHHHHHHHHHHHHT-TCCEEEEEECTTTTSCSCCCC-C--CCTT------SSEEEEESEETTTTEECS--S-
T ss_pred             CeEEEEeCCHHHHHHHHHHHHc-CCceEEEecccCcCCCcCChh-h--cCCC------CCEEEEeCCCCCcceeCC--c-
Confidence            0123566666666554444333 57899999987774  56665 3  5443      347888899999999844  1 


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                        |++ +|+++|||++++.+....+        ++.+|.+++++|||++ |.|+|++|
T Consensus       160 --i~~-~~~~~~vD~~q~~g~~~id--------~~~~d~~~~s~~K~~g-p~G~g~l~  205 (361)
T 3m5u_A          160 --YPK-TKTPLIVDASSDFFSRKVD--------FSNIALFYGGVQKNAG-ISGLSCIF  205 (361)
T ss_dssp             --CCC-CSSCEEEECGGGTTSSCCC--------CTTEEEEEEETTTTSS-CTTCEEEE
T ss_pred             --ccc-cCCEEEEEcccccCCCCCC--------cccCCEEEEechhccC-CCccEEEE
Confidence              344 4999999999999876432        2346999999999996 99999986

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.38  E-value=3.4e-12  Score=124.78  Aligned_cols=166  Identities=14%  Similarity=0.024  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      ..++.+++++++|.+                       ..+||+|||+||..++.+++.......+.  +       .++
T Consensus        80 ~~~l~~~la~~~g~~-----------------------~v~~~~~gt~a~~~al~~~~~~~~~~~~~--~-------~~~  127 (392)
T 3ruy_A           80 LGPWYEKVAKLTNKE-----------------------MVLPMNTGAEAVETAIKTARRWAYDVKKV--E-------ANR  127 (392)
T ss_dssp             HHHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHHHHHHHTSCC--C-------TTC
T ss_pred             HHHHHHHHHHhcCCC-----------------------EEEEeCcHHHHHHHHHHHHHHhhhhccCC--C-------CCC
Confidence            378899999999833                       47999999999999998876531110000  0       123


Q ss_pred             eEEEecCCCchHHHHHH-HHcCC------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc
Q psy1596         243 LVAYCSDQAHSSVEKAG-LIGLV------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC  309 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa-~lg~~------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG  309 (375)
                      ..|++...+|.+...++ .+++.            .+..++.+     |+++|+++|+.+      +.+|+++..++++|
T Consensus       128 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~nptG  196 (392)
T 3ruy_A          128 AEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG-----DLEALKAAITPN------TAAFILEPIQGEAG  196 (392)
T ss_dssp             CEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT-----CHHHHHHHCCTT------EEEEEECSSBSTTT
T ss_pred             cEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc-----cHHHHHHHhccC------eEEEEEeCccCCCC
Confidence            46777777775554444 34321            35555543     899999998732      45788888999999


Q ss_pred             cccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         310 AFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       310 avDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      .+.|    +++|+++|++||+++|+|++|++.......+.....++ ..|.++++  |++..- +..|++
T Consensus       197 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~  263 (392)
T 3ruy_A          197 INIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCA  263 (392)
T ss_dssp             SBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEE
T ss_pred             CccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEE
Confidence            9988    99999999999999999999975422111111111232 36888886  976542 345554

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.37  E-value=4.8e-12  Score=123.91  Aligned_cols=165  Identities=15%  Similarity=0.092  Sum_probs=110.1

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+++++++|.+                       ..+||+|||+|+..++.+++.....+..   +       .+
T Consensus        82 ~~~~l~~~la~~~~~~-----------------------~v~~~~gg~~a~~~al~~~~~~~~~~~~---~-------g~  128 (406)
T 4adb_A           82 PVLRLAKKLIDATFAD-----------------------RVFFCNSGAEANEAALKLARKFAHDRYG---S-------HK  128 (406)
T ss_dssp             HHHHHHHHHHHHSSCS-----------------------EEEEESSHHHHHHHHHHHHHHHHHHHTC---T-------TC
T ss_pred             HHHHHHHHHHhhCCCC-----------------------eEEEeCcHHHHHHHHHHHHHHHHHhcCC---C-------CC
Confidence            3478899999998754                       4899999999999999887753221100   0       01


Q ss_pred             ceEEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC  309 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG  309 (375)
                      +.+|+.+..-|.+...+..+++            .++..+|.+     |+++|+++|+++      +.+|+++ +++.+|
T Consensus       129 ~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~-p~np~g  196 (406)
T 4adb_A          129 SGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYN-----DINSASALIDDS------TCAVIVE-PIQGEG  196 (406)
T ss_dssp             CEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTT-----CHHHHHTTCSTT------EEEEEEC-SEETTT
T ss_pred             cEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCC-----cHHHHHHHhcCC------eEEEEEe-CCcCCC
Confidence            3355555666666666655554            345556543     799999988632      4467777 778887


Q ss_pred             c-----cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         310 A-----FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       310 a-----vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .     .+++++|+++|++||++||+|++|++.......+.....++ ..|.+++  ||+++..+..|++
T Consensus       197 ~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~  263 (406)
T 4adb_A          197 GVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGAL  263 (406)
T ss_dssp             TSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEE
T ss_pred             CCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEE
Confidence            4     46899999999999999999999975422111111111233 3588876  9998854456654

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.37  E-value=6.4e-12  Score=124.67  Aligned_cols=177  Identities=8%  Similarity=-0.075  Sum_probs=118.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHH--HHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTL--ICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl--~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      .++++.++++++.+                     +...++|+|+++++.  .++.+..... +  +.. ..|.   ..+
T Consensus        81 ~~lr~~ia~~~~~~---------------------~~~i~~t~G~~~al~~~~~~~~l~~~~-~--g~~-~~~~---~~~  132 (427)
T 3ppl_A           81 VDIRQIWADLLGVP---------------------VEQVLAGDASSLNIMFDVISWSYIFGN-N--DSV-QPWS---KEE  132 (427)
T ss_dssp             HHHHHHHHHHHTSC---------------------GGGEEECSSCHHHHHHHHHHHHHHHCC-T--TCS-SCGG---GSS
T ss_pred             HHHHHHHHHHhCCC---------------------cceEEEeCCcHHHHHHHHHHHHHhccC-C--ccc-cccc---CCC
Confidence            45566666666765                     236899999999984  4444433200 0  000 0000   001


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEE-cCCCCccccccHH---HH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGT-LGTTGACAFDNLE---EL  317 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t-~GtT~tGavDpl~---eI  317 (375)
                      +..|++.+.+|.++...++..|.+++.||++++| +|+++|+++++..     .+.+|+++ ..+++||.+-+.+   +|
T Consensus       133 gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l  206 (427)
T 3ppl_A          133 TVKWICPVPGYDRHFSITERFGFEMISVPMNEDG-PDMDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRL  206 (427)
T ss_dssp             CCEEEEEESCCHHHHHHHHHTTCEEEEEEEETTE-ECHHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred             CCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCCC-CCHHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHH
Confidence            4578999999999999998888999999998776 9999999998421     14456555 6789999986655   88


Q ss_pred             HHHH-HhcCCEEEEecccccCcccch-----hhhhhh--cCCCcccEEEEcCcccCCCCCcceee
Q psy1596         318 GPIC-EKEGLWLHVDAAYAGSSFICP-----EFRKWL--AGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       318 ~~ia-~~~~iwlHVDaA~gg~~~~~~-----~~~~~~--~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +++| +++|+++++|++|+...+-..     ......  .+....+.+..+++|+++....+|.+
T Consensus       207 ~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~  271 (427)
T 3ppl_A          207 SAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFF  271 (427)
T ss_dssp             HHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEE
T ss_pred             HHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEE
Confidence            9999 999999999999987422110     111110  11223467888999996666667754

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.37  E-value=4.2e-12  Score=126.59  Aligned_cols=145  Identities=14%  Similarity=0.068  Sum_probs=112.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|+++.|.+                       ..+++++|++|+..++..+                    .++.
T Consensus        70 ~~l~~~la~l~g~~-----------------------~~~~~~sG~~Ai~~~~~l~--------------------~~gd  106 (400)
T 3nmy_A           70 FAYERCVAALEGGT-----------------------RAFAFASGMAATSTVMELL--------------------DAGS  106 (400)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHTTS--------------------CTTC
T ss_pred             HHHHHHHHHHhCCC-----------------------CEEEecCHHHHHHHHHHHc--------------------CCCC
Confidence            67788899988765                       3688899998877532111                    1345


Q ss_pred             EEEecCCCchHHHHHHH-H----cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL-I----GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~-l----g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      .|++++..|.+....+. +    .+.+++.++.+     |+++|+++|++.      +.+|++..+++++|.+.|+++|+
T Consensus       107 ~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~  175 (400)
T 3nmy_A          107 HVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT-----DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIA  175 (400)
T ss_dssp             EEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC-----CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHH
Confidence            78899999987766643 2    47788888875     899999998653      45888889999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      ++|+++|+++++|++|+.+....|.    ..   .+|.++.++||+++.|.
T Consensus       176 ~la~~~g~~livDe~~~~~~~~~~~----~~---g~div~~S~sK~l~g~g  219 (400)
T 3nmy_A          176 VIARKHGLLTVVDNTFASPMLQRPL----SL---GADLVVHSATKYLNGHS  219 (400)
T ss_dssp             HHHHHTTCEEEEECTTTHHHHCCGG----GG---TCSEEEEETTTTTTCSS
T ss_pred             HHHHHcCCEEEEECCCcccccCChh----hc---CCcEEEecCccccCCCC
Confidence            9999999999999999865433221    11   36999999999998773

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.37  E-value=4.6e-12  Score=124.82  Aligned_cols=177  Identities=10%  Similarity=-0.041  Sum_probs=121.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE--eCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF--QTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf--tsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .|..++++.+.+|+.+..|.+.                   ++...++  |+|||+|+..++...+..            
T Consensus        73 ~g~~~lr~~ia~~~~~~~~~~~-------------------~~~~i~~~~t~g~~~a~~~~~~~~~~~------------  121 (412)
T 1yaa_A           73 TGLPSLTSNAAKIIFGTQSDAL-------------------QEDRVISVQSLSGTGALHISAKFFSKF------------  121 (412)
T ss_dssp             TCCHHHHHHHHHHHHCTTCHHH-------------------HTTCEEEEEEEHHHHHHHHHHHHHHHH------------
T ss_pred             CCcHHHHHHHHHHHhcCCCCCC-------------------CcceEEEEeccchHhHHHHHHHHHHHh------------
Confidence            3455666777777765444321                   1235788  999999988875443321            


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec-C-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc-
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES-D-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF-  311 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav-  311 (375)
                           .++..|+++..+|.++...++..|.+++.+|. + +++.+|+++|++++++..   ....+++.+.++++||.+ 
T Consensus       122 -----~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~~p~nPtG~~~  193 (412)
T 1yaa_A          122 -----FPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNPTGLDP  193 (412)
T ss_dssp             -----CTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSC---TTCEEEEECSSCTTTCCCC
T ss_pred             -----CCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCC
Confidence                 12346888999999999988888889999998 4 378899999999997531   113455558899999998 


Q ss_pred             --ccHHHHHHHHHhcCCEEEEecccccCcccc---h--hhhhhhcCCCc---ccEEEEcCcccCCCCCc--ceee
Q psy1596         312 --DNLEELGPICEKEGLWLHVDAAYAGSSFIC---P--EFRKWLAGVEY---ANSIAFNPSKWLMVHFD--CTAM  374 (375)
Q Consensus       312 --Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~--~~~~~~~gie~---aDSi~~d~HK~l~~P~~--~g~l  374 (375)
                        +++++|+++|+++|+++++|++|+....-.   +  ....... ...   -+.+..++||.++ |.|  +|.+
T Consensus       194 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~-~~GlriG~~  266 (412)
T 1yaa_A          194 TSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVE-KLSTVSPVFVCQSFAKNAG-MYGERVGCF  266 (412)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHH-HTTTTCCEEEEEECTTTSC-CGGGCEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHh-cCCCCcceEEEeccCCCCC-CcCCcceEE
Confidence              567889999999999999999997653211   0  1111111 111   2466889999875 544  4554

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.36  E-value=5.8e-12  Score=124.53  Aligned_cols=177  Identities=10%  Similarity=-0.090  Sum_probs=118.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHH--HHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTL--ICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl--~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      .++++.++++++.+                     +...++|+|+|+++.  .++.+..... +  + +...|.    .+
T Consensus        73 ~~lr~~ia~~~~~~---------------------~~~i~~t~G~~~al~~~~~~~~l~~~~-~--g-~~~~~~----~~  123 (423)
T 3ez1_A           73 PSARALFAGYLDVK---------------------AENVLVWNNSSLELQGLVLTFALLHGV-R--G-STGPWL----SQ  123 (423)
T ss_dssp             HHHHHHHHHHTTSC---------------------GGGEEECSSCHHHHHHHHHHHHHHTCC-T--T-CSSCGG----GG
T ss_pred             HHHHHHHHHHhCCC---------------------hhhEEEeCCcHHHHHHHHHHHHHhccC-C--C-cccccc----CC
Confidence            56677777777765                     136899999999986  5555433200 0  0 000000    00


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEE-cCCCCccccccHH---HH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGT-LGTTGACAFDNLE---EL  317 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t-~GtT~tGavDpl~---eI  317 (375)
                      +..|++...+|.++...+...|.+++.||.++++ +|+++|+++|++..    .+.+|+++ .++++||.+-+.+   +|
T Consensus       124 gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~----~~~~v~~~~~~~NPtG~~~~~~~l~~l  198 (423)
T 3ez1_A          124 TPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDG-PDVDAVERLAGTDP----SVKGILFVPTYSNPGGETISLEKARRL  198 (423)
T ss_dssp             CCEEEEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHHSCT----TEEEEEECSSSCTTTCCCCCHHHHHHH
T ss_pred             CCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCCC-CCHHHHHHHHhhCC----CceEEEECCCCCCCCCcCCCHHHHHHH
Confidence            3578899999999999988888899999998765 99999999996211    24455544 6789999986655   88


Q ss_pred             HHHH-HhcCCEEEEecccccCcccc------hhhhhhh--cCCCcccEEEEcCcccCCCCCcceee
Q psy1596         318 GPIC-EKEGLWLHVDAAYAGSSFIC------PEFRKWL--AGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       318 ~~ia-~~~~iwlHVDaA~gg~~~~~------~~~~~~~--~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +++| +++|+++++|++|+...+..      +......  .+....+.+..+++|+++.....|.+
T Consensus       199 ~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~  264 (423)
T 3ez1_A          199 AGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFV  264 (423)
T ss_dssp             HTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEE
T ss_pred             HHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEE
Confidence            8888 99999999999998432111      0111110  01223467888999987666677754

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.34  E-value=8.4e-13  Score=129.85  Aligned_cols=152  Identities=11%  Similarity=-0.044  Sum_probs=106.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEE-eCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITF-QTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gvf-tsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ++.+++.+++++++|.+                    .+...+| |+|||+++..++.+...                  
T Consensus        78 ~~~~~~~~~la~~~g~~--------------------~~~~i~~~t~g~t~al~~~~~~l~~------------------  119 (398)
T 2fyf_A           78 NLVGRVRSGLAELFSLP--------------------DGYEVILGNGGATAFWDAAAFGLID------------------  119 (398)
T ss_dssp             HHHHHHHHHHHHHTTCC--------------------TTCEEEEEETCHHHHHHHHHHHTCS------------------
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCceEEEeCCchhHHHHHHHHHhcC------------------
Confidence            34478999999999987                    2346788 99999999988876521                  


Q ss_pred             cCceEEEecCCCchHH-HHHHHHc--CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         240 NSRLVAYCSDQAHSSV-EKAGLIG--LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv-~kaa~lg--~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                       ++ +++++...|... .+.+...  +.+++.||++ ++.++..+    +.      ..+.+|+++.++|++|.+.|+++
T Consensus       120 -~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~g~~~~~~----i~------~~~~~v~~~~~~nptG~~~~~~~  186 (398)
T 2fyf_A          120 -KR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD-PGSAPEPQ----TD------PSVDVIAWAHNETSTGVAVAVRR  186 (398)
T ss_dssp             -SC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC-TTCCCCCC----CC------TTCSEEEEESEETTTTEECCCCC
T ss_pred             -CC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC-CCCCCCcc----cc------CCCCEEEEeCcCCCcceecchHH
Confidence             22 334455666432 2233333  6788889987 34333221    21      12557888889999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |.++   +|+|+|+|+||+.+....+        ++.+|.++.++||+++.|.++|++
T Consensus       187 i~~~---~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l  233 (398)
T 2fyf_A          187 PEGS---DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLA  233 (398)
T ss_dssp             CTTC---C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEE
T ss_pred             hhhh---cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEE
Confidence            8887   8999999999988753211        123699999999999888667765

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.33  E-value=3.5e-11  Score=119.41  Aligned_cols=172  Identities=12%  Similarity=-0.002  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                     ....+||+|||+||..++.+++.....+ +           .++.
T Consensus        89 ~~l~~~la~~~~~~---------------------~~~v~~~~ggtea~~~ai~~~~~~~~~~-g-----------~~~~  135 (429)
T 1s0a_A           89 IELCRKLVAMTPQP---------------------LECVFLADSGSVAVEVAMKMALQYWQAK-G-----------EARQ  135 (429)
T ss_dssp             HHHHHHHHHHSCTT---------------------CCEEEEESSHHHHHHHHHHHHHHHHHHH-T-----------CCCC
T ss_pred             HHHHHHHHHhCCCC---------------------CCEEEEeCCHHHHHHHHHHHHHHHhccc-C-----------CCCC
Confidence            66778899998754                     2368999999999999998876422100 0           0123


Q ss_pred             EEEecC-CCchHHHHHHHHcC-------------CeEEEEecC------CCCCcCHHHHHHHHHHhhhcCCccEEEEEEc
Q psy1596         244 VAYCSD-QAHSSVEKAGLIGL-------------VKMRYIESD------DKLSLRGDKLIEAIERDKKKHLIPFFVCGTL  303 (375)
Q Consensus       244 vV~~S~-~aH~Sv~kaa~lg~-------------~~v~~Vp~d------~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~  303 (375)
                      .|++.+ .-|.+...++.+.+             ..++.++.+      +.+.+|+++|+++|++...   .+.+|+++-
T Consensus       136 ~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~~vi~~p  212 (429)
T 1s0a_A          136 RFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH---EIAAVIIEP  212 (429)
T ss_dssp             EEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTT---TEEEEEECS
T ss_pred             eEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCC---CEEEEEEee
Confidence            455555 45655554443322             135566653      2246999999999975211   234555554


Q ss_pred             C-CCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         304 G-TTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       304 G-tT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      . ++++|.+-+    +++|+++|++||++||+|++|++.......+.....++ ..|.++++  |+++.+ ++.|.+
T Consensus       213 ~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~  286 (429)
T 1s0a_A          213 IVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSAT  286 (429)
T ss_dssp             SEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEE
T ss_pred             cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCCccceEE
Confidence            4 578998766    99999999999999999999985322111000111132 35888766  988766 777765

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.32  E-value=1.9e-11  Score=121.63  Aligned_cols=176  Identities=10%  Similarity=-0.081  Sum_probs=113.1

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      +......++.++|+++++..                    .....+||+|||+||..++.+++...              
T Consensus        83 ~~~~~~~~l~~~la~~~~~~--------------------~~~~v~~~~ggsea~~~al~~~~~~~--------------  128 (439)
T 3dxv_A           83 ASNAPAVTLAERLLASFPGE--------------------GTHKIWFGHSGSDANEAAYRAIVKAT--------------  128 (439)
T ss_dssp             SEEHHHHHHHHHHHHTTTCT--------------------TTEEEEEESSHHHHHHHHHHHHHHHH--------------
T ss_pred             cCCHHHHHHHHHHHHhCCCC--------------------CCCEEEEeCCHHHHHHHHHHHHHHHh--------------
Confidence            44556689999999998543                    11368999999999999999887531              


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCe--------------EEEEecCCCCCc-----CHHHHHHHHHHhhhcCCccEE
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVK--------------MRYIESDDKLSL-----RGDKLIEAIERDKKKHLIPFF  298 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~--------------v~~Vp~d~~g~m-----d~e~Le~aI~~~~~~g~~p~~  298 (375)
                        .++.+|+.+..-|.+...++.+++..              +..+|.+..+.-     |+++|+++|++.  ....+.+
T Consensus       129 --~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~  204 (439)
T 3dxv_A          129 --GRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAV--PAGSIGA  204 (439)
T ss_dssp             --SCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTS--CTTCEEE
T ss_pred             --CCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhc--CCCCEEE
Confidence              12346666777777777666554322              233444333322     799999999521  1123556


Q ss_pred             EEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         299 VCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       299 Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |+++-..+++|.+-+    +++|+++|++||++|++|.+|++.......+.....++ ..|.+++  .|.++..+..|.+
T Consensus       205 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~s~--sK~~~~G~riG~~  281 (439)
T 3dxv_A          205 AFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDILVL--GKGLGGGLPLSAV  281 (439)
T ss_dssp             EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSCCEEE
T ss_pred             EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEEEE--cchhcCCcceEEE
Confidence            777767777888877    99999999999999999999985422111011111232 3577755  5887754445543

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.32  E-value=2.7e-11  Score=119.52  Aligned_cols=170  Identities=11%  Similarity=0.018  Sum_probs=108.6

Q ss_pred             HHHHHHHHHHc-CCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         164 SKVLDFVSKEN-ATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       164 ~~v~~wLa~ll-G~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      .++.+.|++++ | +                    .+...+||+|||+|+..++..++...                .++
T Consensus        87 ~~l~~~la~~~~~-~--------------------~~~~v~~~~g~~~a~~~~~~~a~~~~----------------~~~  129 (426)
T 1sff_A           87 LELCEIMNQKVPG-D--------------------FAKKTLLVTTGSEAVENAVKIARAAT----------------KRS  129 (426)
T ss_dssp             HHHHHHHHHHSSC-S--------------------SCEEEEEESSHHHHHHHHHHHHHHHH----------------TCC
T ss_pred             HHHHHHHHHhCCc-c--------------------cccEEEEeCchHHHHHHHHHHHHHhh----------------CCC
Confidence            67788888888 4 2                    12358999999999999988665421                123


Q ss_pred             eEEEecCCCchHHHHHHHHcCCe-------------EEEEecCC-----CCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVK-------------MRYIESDD-----KLSLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~-------------v~~Vp~d~-----~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                      .+++.+..-|.+...++.+.+.+             ++.+|.+.     ++.+|+++|+++|++.. .+..+.+|+++..
T Consensus       130 ~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~  208 (426)
T 1sff_A          130 GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPV  208 (426)
T ss_dssp             EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSB
T ss_pred             eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecc
Confidence            35555556666666666664432             77788753     34589999999997521 0112445555433


Q ss_pred             CCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         305 TTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       305 tT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+++|.+.+    +++|.++|++||++|++|++|++.....+.......++ ..|.++  ++|+++..+.+|++
T Consensus       209 ~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~s--~sK~~~~GlriG~~  279 (426)
T 1sff_A          209 QGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLTT--FAKSIAGGFPLAGV  279 (426)
T ss_dssp             CTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEEE--ECGGGGTSSCCEEE
T ss_pred             cCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCC-CCCEEE--EcccccCCCceEEE
Confidence            334897766    99999999999999999999996422111011011222 357664  46998753335654

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.29  E-value=4.5e-12  Score=130.82  Aligned_cols=171  Identities=6%  Similarity=-0.020  Sum_probs=122.8

Q ss_pred             cchhHHHHHHHHHHHHHc-C-CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         157 LDRDKYSSKVLDFVSKEN-A-TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~ll-G-~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .|...+++++.+++.+.. + .+..                  .+...++|+|||+++..++.+...+..          
T Consensus       138 ~g~~~lr~~ia~~l~~~~~~~~~~~------------------~~~~i~~t~G~t~al~~~~~~l~~~~l----------  189 (533)
T 3f6t_A          138 RCLVNTEKIINYFLQELSYKDANLA------------------EQTDLFPTEGGTAAIVYAFHSLAENHL----------  189 (533)
T ss_dssp             SCCHHHHHHHHHHHHHHHTTTCCCG------------------GGEEEEEEEHHHHHHHHHHHHHHHTTS----------
T ss_pred             ccHHHHHHHHHHHHHHhcCCCCCCC------------------CcceEEEECCHHHHHHHHHHHhhhhhc----------
Confidence            356778888888887763 3 3420                  124689999999999888775322100          


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC----CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD----DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d----~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                          ..++..|+++..+|.++..++.+.+.+++.++++    +++.+|+++|++++++.      +.+|+++.+++++|.
T Consensus       190 ----~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p~NPtG~  259 (533)
T 3f6t_A          190 ----LKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNPTNPTSK  259 (533)
T ss_dssp             ----SCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESSCTTTCB
T ss_pred             ----cCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCCCCCCcc
Confidence                0134689999999999988888878888888874    46889999999988543      447777789999999


Q ss_pred             ccc---HHHHHHHHH-hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         311 FDN---LEELGPICE-KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       311 vDp---l~eI~~ia~-~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +-+   +.+|+++|+ +||+++++|.+|+....-.+......   ...+.++.+++|.++.|
T Consensus       260 ~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~---~~~~i~~~S~SK~~g~~  318 (533)
T 3f6t_A          260 EFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVV---PYNTMLVYSYSKLFGCT  318 (533)
T ss_dssp             CCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHS---GGGEEEEEESHHHHTCG
T ss_pred             ccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcC---CCCEEEEecCcccCCCc
Confidence            854   558888898 68999999999986543111111111   23468899999987633

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.28  E-value=2.9e-11  Score=118.38  Aligned_cols=167  Identities=12%  Similarity=0.066  Sum_probs=109.4

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .....++.+|+++++|.+                       ..+||+|||+||..|+.+++...... +.          
T Consensus        77 ~~~~~~l~~~la~~~~~~-----------------------~v~~~~gg~ea~~~al~~~~~~~~~~-g~----------  122 (395)
T 3nx3_A           77 NENIAAAAKNLAKASALE-----------------------RVFFTNSGTESIEGAMKTARKYAFNK-GV----------  122 (395)
T ss_dssp             CHHHHHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHHHHHHHT-TC----------
T ss_pred             CHHHHHHHHHHHHhcCCC-----------------------eEEEeCCHHHHHHHHHHHHHHHhhcc-CC----------
Confidence            344588899999998733                       48999999999999999887643111 00          


Q ss_pred             cCceEEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG  307 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~  307 (375)
                      .++.+|+.+..-|.+...+..+++            .++..+|.+     |+++|+++|+++      +.+|++....++
T Consensus       123 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~~~  191 (395)
T 3nx3_A          123 KGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVNEK------TCAIILESVQGE  191 (395)
T ss_dssp             TTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCCTT------EEEEEEESEECT
T ss_pred             CCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-----CHHHHHHhccCC------eEEEEEeCccCC
Confidence            012244444444544444433322            356666654     799999988632      446777766777


Q ss_pred             cccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         308 ACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       308 tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +|.+.+    +++|+++|++||++||+|++|.+.......+.....++ ..|.++++  |.++.++..|.+
T Consensus       192 ~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~G~~  259 (395)
T 3nx3_A          192 GGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSVGAF  259 (395)
T ss_dssp             TSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCCEEE
T ss_pred             CCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCceEEE
Confidence            888866    99999999999999999999986432111111111233 35878776  877766666654

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.28  E-value=8e-11  Score=116.87  Aligned_cols=171  Identities=9%  Similarity=-0.092  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      ..++.+.+++.+|.+                    .....+||+|||+||..++.+++...                 ++
T Consensus        88 ~~~l~~~la~~~~~~--------------------~~~~v~~~~gg~ea~~~ai~~~~~~~-----------------~~  130 (419)
T 2eo5_A           88 QLELAKKLVTYSPGN--------------------FQKKVFFSNSGTEAIEASIKVVKNTG-----------------RK  130 (419)
T ss_dssp             HHHHHHHHHHHSSCS--------------------SCEEEEEESSHHHHHHHHHHHHHTTS-----------------CC
T ss_pred             HHHHHHHHHHhCCCC--------------------cCCEEEEeCchHHHHHHHHHHHHHhh-----------------CC
Confidence            367788999998875                    12368999999999999998776410                 12


Q ss_pred             eEEEecCCCchHHHHHHHHcC-------------CeEEEEecCCCCC----------------cCHHHHH-HHHHHhhhc
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESDDKLS----------------LRGDKLI-EAIERDKKK  292 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d~~g~----------------md~e~Le-~aI~~~~~~  292 (375)
                      .+|+....-|.+...++.+.+             ..++.+|.+++++                +|+++|+ ++|++... 
T Consensus       131 ~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~-  209 (419)
T 2eo5_A          131 YIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVP-  209 (419)
T ss_dssp             EEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCC-
T ss_pred             cEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccC-
Confidence            244444456666665554422             2578888865543                4789999 98874210 


Q ss_pred             CCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         293 HLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       293 g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +..+.+|+++-.++++|.+-+    +++|+++|++||++||+|++|.+....-..+.....++ ..|.++++  |.++.+
T Consensus       210 ~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G  286 (419)
T 2eo5_A          210 PEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVITLA--KALGGG  286 (419)
T ss_dssp             GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTT
T ss_pred             CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEEec--ccccCC
Confidence            012345555544456797655    99999999999999999999986432111001011132 35777655  887765


Q ss_pred             -Ccceee
Q psy1596         369 -FDCTAM  374 (375)
Q Consensus       369 -~~~g~l  374 (375)
                       +..|.+
T Consensus       287 ~~riG~~  293 (419)
T 2eo5_A          287 IMPIGAT  293 (419)
T ss_dssp             TSCCEEE
T ss_pred             ccceEEE
Confidence             666654

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.28  E-value=4.3e-11  Score=119.15  Aligned_cols=167  Identities=13%  Similarity=0.062  Sum_probs=110.2

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .....++.++|++++|.+                       ..+||+|||+||..++.+++.....+ +.          
T Consensus        98 ~~~~~~l~~~la~~~g~~-----------------------~v~~~~ggteA~~~al~~~~~~~~~~-~~----------  143 (420)
T 2pb2_A           98 NEPALRLGRKLIDATFAE-----------------------RVLFMNSGTEANETAFKLARHYACVR-HS----------  143 (420)
T ss_dssp             CHHHHHHHHHHHHHSSCS-----------------------EEEEESSHHHHHHHHHHHHHHHHHHH-TC----------
T ss_pred             CHHHHHHHHHHHhhCCCC-----------------------eEEEeCCHHHHHHHHHHHHHHHhhhc-cC----------
Confidence            344578889999998743                       47999999999999999887642111 00          


Q ss_pred             cCc-eEEEecCCCchHHHHHHHHcCCe------------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCC
Q psy1596         240 NSR-LVAYCSDQAHSSVEKAGLIGLVK------------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT  306 (375)
Q Consensus       240 ~~~-~vV~~S~~aH~Sv~kaa~lg~~~------------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT  306 (375)
                      ..+ .+|+.+..-|.+...++.+.+.+            ++.+|.+     |+++|+++|+++      +.+|+++...+
T Consensus       144 ~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~~~------~~~vi~~p~~~  212 (420)
T 2pb2_A          144 PFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMDDH------TCAVVVEPIQG  212 (420)
T ss_dssp             TTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCCTT------EEEEEECSEET
T ss_pred             CCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCC-----CHHHHHHHhccC------ceEEEEeCCcC
Confidence            012 34445555666666665554432            6666643     899999998642      44666665555


Q ss_pred             Cccc----cccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         307 GACA----FDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       307 ~tGa----vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+|.    .+++++|.++|++||++|++|++|.+....-..+.....++ ..|.+++  +|+++..+..|++
T Consensus       213 ~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit~--sK~l~~G~~iG~~  281 (420)
T 2pb2_A          213 EGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILTS--AKALGGGFPVSAM  281 (420)
T ss_dssp             TTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEE
T ss_pred             CCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEEe--cccccCCCceEEE
Confidence            5564    47899999999999999999999976432111111111233 3688765  7999866667765

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=98.93  E-value=3.9e-13  Score=131.80  Aligned_cols=171  Identities=13%  Similarity=0.060  Sum_probs=122.3

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..++++++.+|+++.+|++.                   +....++|+|||+++..++.+...                 
T Consensus        68 ~~~l~~~la~~l~~~~g~~~-------------------~~~~v~~~~g~~~a~~~~~~~~~~-----------------  111 (392)
T 3b1d_A           68 SDELLQAVLDWEKSEHQYSF-------------------DKEDIVFVEGVVPAISIAIQAFTK-----------------  111 (392)
Confidence            44566888888888888652                   234578999999999888877643                 


Q ss_pred             hcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-C--CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-D--KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---  312 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~--~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---  312 (375)
                        ++..|++...+|.++..++...+.+++.+|.+ +  ++.+|+++|++++++..     +.+|+++.+++++|.+-   
T Consensus       112 --~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~  184 (392)
T 3b1d_A          112 --EGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVEND-----VKLYLLCNPHNPGGRVWERE  184 (392)
Confidence              13468889999999998887777788888874 3  35699999999997321     33566678889999874   


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCC----CcccEEEEcCcccCC-CCCccee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGV----EYANSIAFNPSKWLM-VHFDCTA  373 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gi----e~aDSi~~d~HK~l~-~P~~~g~  373 (375)
                      ++++|+++|+++|+++++|++|+....-...... +..+    ...+.+..+++|+++ ..+.+|.
T Consensus       185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  249 (392)
T 3b1d_A          185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVS-FNTVSPDFKDFALVLSSATKTFNIAGTKNSY  249 (392)
Confidence            5999999999999999999999886432111111 1111    123466788999986 3344554

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.26  E-value=6.7e-12  Score=123.30  Aligned_cols=176  Identities=11%  Similarity=0.026  Sum_probs=115.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+.+|++.                   ++...++|+|||+|+..++.+.+...     .  +    
T Consensus        75 ~g~~~lr~~ia~~~~~~~g~~~-------------------~~~~i~~t~G~t~al~~~~~~l~~~g-----d--~----  124 (417)
T 3g7q_A           75 QGKTALLNALAVLLRETLGWDI-------------------EPQNIALTNGSQSAFFYLFNLFAGRR-----A--D----  124 (417)
T ss_dssp             TSHHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESCHHHHHHHHHHHHSBC--------------
T ss_pred             CCcHHHHHHHHHHHHHHhCCCC-------------------CcccEEEeCCcHHHHHHHHHHHcCCC-----c--c----
Confidence            4556777888899988888774                   34578999999999998887654210     0  0    


Q ss_pred             hhhcCceEEEec-CCCchHHHHHHH-H---c--CCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc
Q psy1596         237 AEINSRLVAYCS-DQAHSSVEKAGL-I---G--LVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA  308 (375)
Q Consensus       237 ~~~~~~~vV~~S-~~aH~Sv~kaa~-l---g--~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t  308 (375)
                         ..+..|+++ ..+|..+..++. .   .  +..+..++.+ .++.+|+++|+  +.+      .+.+|+.+.++++|
T Consensus       125 ---~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~v~~~~p~Npt  193 (417)
T 3g7q_A          125 ---GSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGE------ETGMICVSRPTNPT  193 (417)
T ss_dssp             ----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCT------TEEEEEEESSCTTT
T ss_pred             ---CCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--ccc------CceEEEECCCCCCC
Confidence               011257776 777777766553 1   1  2344455543 24578999887  322      25578888899999


Q ss_pred             ccccc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         309 CAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       309 GavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |.+-+   +++|+++|++||+++++|++|+....-. .+..........+.+..+++|++.....+|.+
T Consensus       194 G~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~  261 (417)
T 3g7q_A          194 GNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIILCMSLSKLGLPGSRCGII  261 (417)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESGGGTCTTSCCEEE
T ss_pred             CCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccccCCCCCEEEEEechhccCCCcceEEE
Confidence            99866   9999999999999999999998532100 00011111223577889999976555566654

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.24  E-value=1e-10  Score=116.05  Aligned_cols=125  Identities=11%  Similarity=-0.089  Sum_probs=88.5

Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEE-EEcCCCCccccccHH---HHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVC-GTLGTTGACAFDNLE---ELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv-~t~GtT~tGavDpl~---eI~~  319 (375)
                      .|++.+.+|..+..+++..|.+++.||.+++| +|+++|++++++.     .+.+|+ .+.++++||.+-+.+   +|++
T Consensus       133 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~  206 (422)
T 3d6k_A          133 KWLCPVPGYDRHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAE  206 (422)
T ss_dssp             EEEEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred             EEEEeCCccHHHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence            68899999999999988878899999997776 9999999998642     133555 566889999986655   8888


Q ss_pred             HHH-hcCCEEEEecccccCcc-cc----hhhhhhh--cCCCcccEEEEcCcccCCCCCcceee
Q psy1596         320 ICE-KEGLWLHVDAAYAGSSF-IC----PEFRKWL--AGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       320 ia~-~~~iwlHVDaA~gg~~~-~~----~~~~~~~--~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +|+ ++|+++++|++|+...+ ..    +......  .+....+.+..+++|+++.-..+|.+
T Consensus       207 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~  269 (422)
T 3d6k_A          207 MSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFF  269 (422)
T ss_dssp             CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEE
T ss_pred             HHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEE
Confidence            888 99999999999974111 11    0111110  11223467788999984433446654

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.24  E-value=3.4e-11  Score=120.08  Aligned_cols=167  Identities=14%  Similarity=0.002  Sum_probs=113.2

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.  .|++.                   ++...++|+|+++++..+ .+...               
T Consensus       111 ~g~~~lr~~ia~~~~--~g~~~-------------------~~~~i~~t~G~~~al~~~-~~l~~---------------  153 (449)
T 3qgu_A          111 QGQGALREAVASTFY--GHAGR-------------------AADEIFISDGSKCDIARI-QMMFG---------------  153 (449)
T ss_dssp             TCCHHHHHHHHHHHH--TTTTC-------------------CGGGEEEESCHHHHHHHH-HHHHC---------------
T ss_pred             CCcHHHHHHHHHHHH--cCCCC-------------------CHHHEEEccCHHHHHHHH-HHHhC---------------
Confidence            456667777777776  56552                   334689999999998765 32211               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCe----------EEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCC
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVK----------MRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT  306 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~----------v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT  306 (375)
                          ++..|++++.+|.++..+++..+.+          ++.+|.++++.++.+ +++.        ..+.+|+++.+++
T Consensus       154 ----~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~v~l~~p~N  220 (449)
T 3qgu_A          154 ----SKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPD-LSKA--------KRTDIIFFCSPNN  220 (449)
T ss_dssp             ----SSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCC-GGGC--------CCCSEEEEESSCT
T ss_pred             ----CCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCC-hhHc--------CCCCEEEEeCCCC
Confidence                3457889999999999998876666          899998754333322 1111        1244677778999


Q ss_pred             Ccccc---ccHHHHHHHHHhcCCEEEEecccccCcccc---hhhhhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         307 GACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC---PEFRKWLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       307 ~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~---~~~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                      ++|.+   +++++|+++|++||+++++|++|+++..-.   ..... +.+....+.+..+++|+++ ....+|.+
T Consensus       221 PtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~  294 (449)
T 3qgu_A          221 PTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYE-IPGADEVAIETCSFSKYAGFTGVRLGWT  294 (449)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGG-STTGGGTEEEEEECSGGGTCTTCCCEEE
T ss_pred             CCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhh-ccCCCCcEEEEecchhhcCCccceeEEE
Confidence            99988   468899999999999999999999854211   01111 1111234788999999986 44556654

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.23  E-value=9.4e-11  Score=116.35  Aligned_cols=172  Identities=13%  Similarity=0.049  Sum_probs=103.8

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ......++.+|+++.++.+.                     ...+||+|||+||..++.+++.....+ +          
T Consensus        70 ~~~~~~~l~~~la~~~~~~~---------------------~~v~~~~gg~ea~~~al~~~~~~~~~~-g----------  117 (430)
T 3i4j_A           70 SSDVLEEYAGRLARFVGLPT---------------------FRFWAVSGGSEATESAVKLARQYHVER-G----------  117 (430)
T ss_dssp             EEHHHHHHHHHHHHHTTCTT---------------------CEEEEESSHHHHHHHHHHHHHHHHHHT-T----------
T ss_pred             CCHHHHHHHHHHHHhCCCCC---------------------CEEEEeCcHHHHHHHHHHHHHHHHHhc-C----------
Confidence            34455888999999988651                     368999999999999999888643221 0          


Q ss_pred             hcCceEEEecCCCchHHHH-HHHHcCC--------------eEEEEecCCC---CCcCHHHHHHHHHHhhhcCCccEEEE
Q psy1596         239 INSRLVAYCSDQAHSSVEK-AGLIGLV--------------KMRYIESDDK---LSLRGDKLIEAIERDKKKHLIPFFVC  300 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~k-aa~lg~~--------------~v~~Vp~d~~---g~md~e~Le~aI~~~~~~g~~p~~Vv  300 (375)
                      ..++..|++.+.+++.... +..+++.              .+..+|.++.   +..|+++|+++|++...  ..+.+|+
T Consensus       118 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--~~~~~vi  195 (430)
T 3i4j_A          118 EPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGP--ETVAAFM  195 (430)
T ss_dssp             CTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCG--GGEEEEE
T ss_pred             CCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCC--CCEEEEE
Confidence            0123355555555443333 3333321              3445555433   44678999999975311  1244566


Q ss_pred             EEcCCC-Ccccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc-CCCcccEEEEcCcccCCC
Q psy1596         301 GTLGTT-GACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA-GVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       301 ~t~GtT-~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~-gie~aDSi~~d~HK~l~~  367 (375)
                      ++-.++ ++|.+-+    +++|+++|++||++||+|.+|.+.......+..... ++ ..|.++++  |.+..
T Consensus       196 ~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~s--K~l~~  265 (430)
T 3i4j_A          196 AEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVLG--KGLAA  265 (430)
T ss_dssp             ECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEEC--GGGTT
T ss_pred             EcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEEc--ccccC
Confidence            665555 7787665    999999999999999999999865321111111111 33 35777765  98764

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.21  E-value=1.3e-10  Score=114.35  Aligned_cols=146  Identities=10%  Similarity=-0.046  Sum_probs=104.0

Q ss_pred             EEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHH
Q psy1596         203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGD  280 (375)
Q Consensus       203 vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e  280 (375)
                      ..|.|||+++..+..+++..                ..++..|++++.+|.++...++..|.+++.+|.  ++++.+|++
T Consensus       108 ~~~~~g~ga~~~~~~~~~~~----------------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  171 (409)
T 4eu1_A          108 CQTLGGTGALRIGGDLLNRF----------------VANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLA  171 (409)
T ss_dssp             EEESHHHHHHHHHHHHGGGT----------------SSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHH
T ss_pred             eecccchHHHHHHHHHHHHh----------------cCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHH
Confidence            45999999987665443321                013468999999999999999888899999997  456899999


Q ss_pred             HHHHHHHHhhhcCCccEEEEEEcCCCCccccc---cHHHHHHHHHhcCCEEEEecccccCcccc-----hhhhhhhcCCC
Q psy1596         281 KLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---NLEELGPICEKEGLWLHVDAAYAGSSFIC-----PEFRKWLAGVE  352 (375)
Q Consensus       281 ~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---pl~eI~~ia~~~~iwlHVDaA~gg~~~~~-----~~~~~~~~gie  352 (375)
                      +|++++++...   ...+++.+.++++||.+-   ++++|+++|++||+++++|.+|+....-.     ....... +..
T Consensus       172 ~l~~~l~~~~~---~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-~~~  247 (409)
T 4eu1_A          172 GMLECLDKAPE---GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLV-DMV  247 (409)
T ss_dssp             HHHHHHHHSCT---TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-TTS
T ss_pred             HHHHHHHhCCC---CcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHH-hhC
Confidence            99999975321   245666678899999885   46669999999999999999998865321     0111111 111


Q ss_pred             cccEEEEcCcccCCCC
Q psy1596         353 YANSIAFNPSKWLMVH  368 (375)
Q Consensus       353 ~aDSi~~d~HK~l~~P  368 (375)
                      .-..+..+++|.++.|
T Consensus       248 ~~~i~~~S~SK~~g~~  263 (409)
T 4eu1_A          248 PNLIVAQSFSKNFGLY  263 (409)
T ss_dssp             SCCEEEEECTTTSSCG
T ss_pred             CcEEEEecCcccccCc
Confidence            1124556888987644

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.20  E-value=2.3e-10  Score=110.00  Aligned_cols=154  Identities=10%  Similarity=-0.063  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++++++++|.+.                     ...++|+|||+++..++.+..                     +.
T Consensus        53 ~~lr~~la~~~~~~~---------------------~~i~~t~g~~~al~~~~~~l~---------------------gd   90 (350)
T 3fkd_A           53 GTLRQMLAKRNSVDN---------------------NAILVTNGPTAAFYQIAQAFR---------------------GS   90 (350)
T ss_dssp             HHHHHHHHHHTTCCG---------------------GGEEEESHHHHHHHHHHHHTT---------------------TC
T ss_pred             HHHHHHHHHHhCcCH---------------------HHEEEcCCHHHHHHHHHHHHC---------------------CC
Confidence            567889999998751                     358999999999988876543                     13


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEec-CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIES-DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.++..+++..|.+++.+|. ++.+.+++        +      .+.+|+.+.++++||.+-++++|.++++
T Consensus        91 ~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~  156 (350)
T 3fkd_A           91 RSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF--------S------NMDFCWLCNPNNPDGRLLQRTEILRLLN  156 (350)
T ss_dssp             EEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC--------T------TCSEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc--------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHH
Confidence            6889999999999999888899999999 66455665        1      1447777899999999999999999998


Q ss_pred             hcC-CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         323 KEG-LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       323 ~~~-iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      .++ .++++|++|+....-.+.....+. ....+.+..+++|+++.| ...|.+
T Consensus       157 ~~~~~~li~Dea~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~  209 (350)
T 3fkd_A          157 DHPDTTFVLDQSYVSFTTEEVIRPADIK-GRKNLVMVYSFSHAYGIPGLRIGYI  209 (350)
T ss_dssp             HCTTSEEEEECTTTTSCSSCCCCGGGGT-TCSSEEEEEESHHHHSCGGGCCEEE
T ss_pred             hCCCCEEEEECchhhhccCcchhhHHhh-cCCCEEEEecCchhccCcchheEeE
Confidence            876 799999999865421111011111 123357788999998733 555654

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.20  E-value=2.6e-10  Score=114.14  Aligned_cols=168  Identities=11%  Similarity=-0.022  Sum_probs=99.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.+.|++++|.+                       ..+||+|||+||..++.+++.....+.          ++.
T Consensus       107 ~~~~~l~~~la~~~g~~-----------------------~v~~~~sGseA~~~al~~a~~~~~~~~----------g~~  153 (433)
T 1z7d_A          107 VPLGICERYLTNLLGYD-----------------------KVLMMNTGAEANETAYKLCRKWGYEVK----------KIP  153 (433)
T ss_dssp             HHHHHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHHHHHHHTS----------CCC
T ss_pred             HHHHHHHHHHHhhcCCC-----------------------eEEEeCCHHHHHHHHHHHHHHHhhhcc----------CCC
Confidence            34477788888888743                       479999999999999998875321100          000


Q ss_pred             -CceEEEecC-CCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCC
Q psy1596         241 -SRLVAYCSD-QAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT  306 (375)
Q Consensus       241 -~~~vV~~S~-~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT  306 (375)
                       .+..|++.+ .-|.+...++.+.+            ..++.+|.+     |+++|+++|+..     .+.+|+++-..+
T Consensus       154 ~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~-----~~~~vi~ep~~~  223 (433)
T 1z7d_A          154 ENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEELKDP-----NVCAFIVEPIQG  223 (433)
T ss_dssp             TTCCEEEEETTC--------------------------CEEEECTT-----CHHHHHHHHTST-----TEEEEEECSSBS
T ss_pred             CCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhCCC-----CEEEEEEECCCC
Confidence             113455544 45666555554433            245556643     899999999521     244566654445


Q ss_pred             Cccccc----cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         307 GACAFD----NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       307 ~tGavD----pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      ++|.+-    ++++|.++|++||++|++|++|.+.......+.....++ ..|.+++  .|+++.. +..|++
T Consensus       224 ~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~~~G~v  293 (433)
T 1z7d_A          224 EAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVILL--GKALSGGHYPISAV  293 (433)
T ss_dssp             TTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCCEEE
T ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEEE--CccccCCCCCeEEE
Confidence            578754    899999999999999999999986422111111111233 4687755  5988754 456654

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.18  E-value=4.2e-10  Score=111.50  Aligned_cols=165  Identities=12%  Similarity=-0.023  Sum_probs=107.7

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .....++.+|+++.++ +                     ....+||+|||+|+..|+..++...                
T Consensus        91 ~~~~~~la~~l~~~~~-~---------------------~~~v~~~~ggsea~~~al~~a~~~~----------------  132 (427)
T 3fq8_A           91 CALENVLAEMVNDAVP-S---------------------IEMVRFVNSGTEACMAVLRIMRAYT----------------  132 (427)
T ss_dssp             CHHHHHHHHHHHHHST-T---------------------CSEEEEESSHHHHHHHHHHHHHHHH----------------
T ss_pred             CHHHHHHHHHHHHhCC-C---------------------CCEEEEeCCHHHHHHHHHHHHHHhh----------------
Confidence            3445888999999986 3                     1358999999999999998887531                


Q ss_pred             cCceEEEecCCCchHHHHHHHHcC-------------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEE
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGL-------------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVC  300 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~-------------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv  300 (375)
                      .++.+|+....-|.+...+..+.+                   ..++.+|.+     |+++|++++++..   ..+.+|+
T Consensus       133 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi  204 (427)
T 3fq8_A          133 GRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAENP---GEIAGVI  204 (427)
T ss_dssp             CCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHST---TTEEEEE
T ss_pred             CCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhCC---CCEEEEE
Confidence            012244444444433322211111                   124555543     8999999997632   1255777


Q ss_pred             EEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         301 GTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       301 ~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++-..+++|.+-+    +++|.++|++||++|++|++|++. .....+.....++ ..|.++++  |.++..+..|.+
T Consensus       205 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~  278 (427)
T 3fq8_A          205 LEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLPVGAY  278 (427)
T ss_dssp             ECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSSCEEE
T ss_pred             EcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcceEEE
Confidence            7777777888888    999999999999999999999865 3222111112233 35777776  988754445553

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.17  E-value=4.5e-10  Score=111.69  Aligned_cols=162  Identities=14%  Similarity=0.053  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      ..++.+++++.++ .                     ....+||+|||+||..|+.+++...                .++
T Consensus        95 ~~~l~~~la~~~~-~---------------------~~~v~~~~~Gsea~~~ai~~a~~~~----------------~~~  136 (429)
T 3k28_A           95 ENKLAKLVIERVP-S---------------------IEIVRMVNSGTEATMSALRLARGYT----------------GRN  136 (429)
T ss_dssp             HHHHHHHHHHHST-T---------------------CSEEEEESSHHHHHHHHHHHHHHHH----------------TCC
T ss_pred             HHHHHHHHHHhCC-C---------------------CCEEEEeCChHHHHHHHHHHHHHhh----------------CCC
Confidence            3677888888875 2                     1358999999999999999887631                012


Q ss_pred             eEEEecCCCchHHHHHHHHcCC-------------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLV-------------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL  303 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~-------------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~  303 (375)
                      .+|+.+..-|.+...++...+.                   .++.+|.+     |+++|++++++...   .+.+|++.-
T Consensus       137 ~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~---~~~~vi~ep  208 (429)
T 3k28_A          137 KILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYN-----DLESVKYAFEQFGD---DIACVIVEP  208 (429)
T ss_dssp             EEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHGG---GEEEEEECS
T ss_pred             EEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCC-----CHHHHHHHHHhCCC---CEEEEEEcC
Confidence            2444445555444333222221                   23333332     89999999986321   244666666


Q ss_pred             CCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         304 GTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       304 GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ..+++|.+-+    +++|.++|++||++||+|++|.+. ...........++ ..|.++++  |.++..+..|.+
T Consensus       209 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~  279 (429)
T 3k28_A          209 VAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTCLG--KVIGGGLPVGAY  279 (429)
T ss_dssp             SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEEEC--GGGGTTSCCEEE
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCC-CCceehhh--hhhcCCCCeEEE
Confidence            6666788877    999999999999999999999865 3221111111233 35777765  988766666654

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.17  E-value=4.1e-10  Score=111.84  Aligned_cols=162  Identities=12%  Similarity=0.042  Sum_probs=103.1

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ...++.+++++.++ +                     ....+||+|||+||..|+.+++...                 +
T Consensus        96 ~~~~l~~~la~~~~-~---------------------~~~v~~~~sGsea~~~ai~~a~~~~-----------------~  136 (434)
T 3l44_A           96 LEVKFAKMLKEAMP-A---------------------LDKVRFVNSGTEAVMTTIRVARAYT-----------------G  136 (434)
T ss_dssp             HHHHHHHHHHHHCT-T---------------------CSEEEEESSHHHHHHHHHHHHHHHH-----------------C
T ss_pred             HHHHHHHHHHHhCC-C---------------------CCEEEEeCchHHHHHHHHHHHHHhh-----------------C
Confidence            33678888888875 2                     1358999999999999999887631                 1


Q ss_pred             ceEEEecCC-CchHHHHHHHHcCC-------------------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEE
Q psy1596         242 RLVAYCSDQ-AHSSVEKAGLIGLV-------------------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCG  301 (375)
Q Consensus       242 ~~vV~~S~~-aH~Sv~kaa~lg~~-------------------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~  301 (375)
                      +..|++.+. -|.+...+...++.                   .+..+|.+     |+++|+++|++...   .+.+|++
T Consensus       137 ~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~---~~~~vi~  208 (434)
T 3l44_A          137 RTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFN-----NVETLKEALDKWGH---EVAAILV  208 (434)
T ss_dssp             CCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHGG---GEEEEEE
T ss_pred             CCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcc-----cHHHHHHHHHhCCC---CEEEEEE
Confidence            224444444 44433322222221                   23344432     89999999986321   2446666


Q ss_pred             EcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         302 TLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       302 t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +-.++.+|.+-+    +++|.++|++||++||+|++|.+. ...........++ ..|.++++  |.++.++..|.+
T Consensus       209 ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~  281 (434)
T 3l44_A          209 EPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-TPDLTALG--KVIGGGLPIGAY  281 (434)
T ss_dssp             CSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-CCSEEEEE--GGGGTTSSCEEE
T ss_pred             cCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCC-CCCeeehh--hhhcCCcCeeeE
Confidence            656666787777    999999999999999999999875 3221111111233 35777665  887766666654

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.16  E-value=3.1e-10  Score=113.85  Aligned_cols=167  Identities=10%  Similarity=-0.031  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.++|++++|.+                       ..+||+|||+||..++.+++.....+.+. .+       .++.
T Consensus       121 ~~l~~~la~~~g~~-----------------------~v~~~~sGseA~~~al~~~~~~~~~~~g~-~~-------g~~~  169 (439)
T 2oat_A          121 GEYEEYITKLFNYH-----------------------KVLPMNTGVEAGETACKLARKWGYTVKGI-QK-------YKAK  169 (439)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHHHHHHHTTCC-CT-------TCCE
T ss_pred             HHHHHHHHHhcCCC-----------------------EEEEeCCHHHHHHHHHHHHHHHhhhccCC-CC-------CCCe
Confidence            67788888888744                       47999999999999999887532110000 00       0123


Q ss_pred             EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                      +|+.+..-|.+...++.+.+            ..++.+|.+     |+++|+++|+..     .+.+|+++-..+++|.+
T Consensus       170 vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~-----~~~~vi~ep~~~~~G~~  239 (439)
T 2oat_A          170 IVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQDP-----NVAAFMVEPIQGEAGVV  239 (439)
T ss_dssp             EEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS-----CHHHHHHHTTST-----TEEEEEECSSBTTTTSB
T ss_pred             EEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC-----CHHHHHHHhCCC-----CEEEEEEECCCCCCCCc
Confidence            45555556776666655543            456777753     899999998521     24456655444557866


Q ss_pred             c----cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccceee
Q psy1596         312 D----NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       312 D----pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      -    ++++|.++|++||++|++|++|.+....-..+.....++ ..|.++  +.|+++.. +..|++
T Consensus       240 ~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~-~~Di~t--~sK~l~~G~~~~G~v  304 (439)
T 2oat_A          240 VPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENV-RPDIVL--LGKALSGGLYPVSAV  304 (439)
T ss_dssp             CCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTSSCCEEE
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCC-CCcEEE--ecccccCCCCCeEEE
Confidence            4    899999999999999999999976422111111111233 468764  46988765 456654

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.15  E-value=5.6e-10  Score=111.49  Aligned_cols=179  Identities=15%  Similarity=0.059  Sum_probs=109.5

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ......++.+.|+++++.+                     ....+||+|||+|+..++.+++.....+ +          
T Consensus        91 ~~~~~~~l~~~la~~~~~~---------------------~~~v~~~~ggsea~~~al~~~~~~~~~~-g----------  138 (449)
T 3a8u_X           91 GHPLSFQLAEKITDLTPGN---------------------LNHVFFTDSGSECALTAVKMVRAYWRLK-G----------  138 (449)
T ss_dssp             CCHHHHHHHHHHHTTSSTT---------------------EEEEEEESSHHHHHHHHHHHHHHHHHHT-T----------
T ss_pred             CCHHHHHHHHHHHHhCCCC---------------------CCEEEEcCcHHHHHHHHHHHHHHHHHhc-C----------
Confidence            3344477888899887643                     1358999999999999999887532110 0          


Q ss_pred             hcCce-EEEecCCCchHHHHHHHHcC------------CeEEEEecCCCC-----CcC--------HHHHHHHHHHhhhc
Q psy1596         239 INSRL-VAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKL-----SLR--------GDKLIEAIERDKKK  292 (375)
Q Consensus       239 ~~~~~-vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g-----~md--------~e~Le~aI~~~~~~  292 (375)
                      ..++. +|+.+..-|.+...++.+.+            ..++.++.+..+     .+|        +++|+++|++... 
T Consensus       139 ~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~-  217 (449)
T 3a8u_X          139 QATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDA-  217 (449)
T ss_dssp             CTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCG-
T ss_pred             CCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCC-
Confidence            00223 44445666666665555433            135566653222     257        9999999975310 


Q ss_pred             CCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         293 HLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       293 g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                       ..+.+|+++-..+++|.+-+    +++|.++|++||++|++|++|.+....-..+.....++ ..|.+++  .|+++.-
T Consensus       218 -~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~s~--sK~l~~G  293 (449)
T 3a8u_X          218 -SNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLMCI--AKQVTNG  293 (449)
T ss_dssp             -GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTT
T ss_pred             -CCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEEEE--cccccCC
Confidence             12445665544456898777    99999999999999999999964322111011111233 3587765  4987642


Q ss_pred             -Ccceee
Q psy1596         369 -FDCTAM  374 (375)
Q Consensus       369 -~~~g~l  374 (375)
                       +..|.+
T Consensus       294 ~~~~G~~  300 (449)
T 3a8u_X          294 AIPMGAV  300 (449)
T ss_dssp             SSCCEEE
T ss_pred             CCceEEE
Confidence             235544

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.14  E-value=9.3e-10  Score=110.12  Aligned_cols=176  Identities=13%  Similarity=0.010  Sum_probs=107.6

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ......++.+||+++++.+                    . . .+||+|||+||..|+.+++...... +          
T Consensus        89 ~~~~~~~la~~l~~~~~~~--------------------~-~-v~~~~ggseA~~~al~~~~~~~~~~-g----------  135 (452)
T 3n5m_A           89 SHEPAIKLAEKLNEWLGGE--------------------Y-V-IFFSNSGSEANETAFKIARQYYAQK-G----------  135 (452)
T ss_dssp             EEHHHHHHHHHHHHHHTSC--------------------E-E-EEEESSHHHHHHHHHHHHHHHHHTT-T----------
T ss_pred             CCHHHHHHHHHHHHhCCCC--------------------c-e-EEEeCchHHHHHHHHHHHHHHHHhc-C----------
Confidence            4455588999999998765                    2 2 8999999999999999988542110 0          


Q ss_pred             hcCce-EEEecCCCchHHHHHHHHcCC------------eEEEEecCCCCCc------------CHHHHHHHHHHhhhcC
Q psy1596         239 INSRL-VAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDKLSL------------RGDKLIEAIERDKKKH  293 (375)
Q Consensus       239 ~~~~~-vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~g~m------------d~e~Le~aI~~~~~~g  293 (375)
                      ..++. +|+....-|....-+..+++.            .+..++.....+.            ++++|+++|++..  +
T Consensus       136 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~  213 (452)
T 3n5m_A          136 EPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWEL--S  213 (452)
T ss_dssp             CTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHC--G
T ss_pred             CCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcC--C
Confidence            00223 444444445444444443321            3455554222211            1899999997311  1


Q ss_pred             CccEEEEEEcC-CCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         294 LIPFFVCGTLG-TTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       294 ~~p~~Vv~t~G-tT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ..+.+|++.-. .+ +|.+-+    +++|+++|++||++|++|.+|.+....-..+.....++ ..|.++++  |.++..
T Consensus       214 ~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l~~G  289 (452)
T 3n5m_A          214 ETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITMA--KGITSA  289 (452)
T ss_dssp             GGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTT
T ss_pred             CCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEeec--ccccCC
Confidence            12445666655 57 998765    99999999999999999999986432211111112233 36888775  776544


Q ss_pred             -Cccee
Q psy1596         369 -FDCTA  373 (375)
Q Consensus       369 -~~~g~  373 (375)
                       +..|.
T Consensus       290 ~~~ig~  295 (452)
T 3n5m_A          290 YLPLSA  295 (452)
T ss_dssp             SSCCEE
T ss_pred             CcceEE
Confidence             44454

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.14  E-value=1.5e-09  Score=108.76  Aligned_cols=178  Identities=10%  Similarity=-0.015  Sum_probs=104.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ......++.+||+++++.+                     ....+||+|||+||..|+.+++...... +          
T Consensus        85 ~~~~~~~la~~l~~~~~~~---------------------~~~v~~~~sGseA~~~al~~~~~~~~~~-G----------  132 (448)
T 3dod_A           85 TNVPATQLAETLIDISPKK---------------------LTRVFYSDSGAEAMEIALKMAFQYWKNI-G----------  132 (448)
T ss_dssp             EEHHHHHHHHHHHHHSCTT---------------------EEEEEEESSHHHHHHHHHHHHHHHHHHT-T----------
T ss_pred             CCHHHHHHHHHHHHhCCCC---------------------CCEEEEeCchHHHHHHHHHHHHHHHHhh-C----------
Confidence            3445588899999998643                     1358999999999999999998742110 0          


Q ss_pred             hcCceEEEecCCC-chHHHHHHHHcC------------CeEEEEecCCCCCc-----------CHHHHHHHHHHhhhcCC
Q psy1596         239 INSRLVAYCSDQA-HSSVEKAGLIGL------------VKMRYIESDDKLSL-----------RGDKLIEAIERDKKKHL  294 (375)
Q Consensus       239 ~~~~~vV~~S~~a-H~Sv~kaa~lg~------------~~v~~Vp~d~~g~m-----------d~e~Le~aI~~~~~~g~  294 (375)
                      ...+..|++.+.+ |.+...+..+++            ..+..+|..+.++.           |+++|+++|++...   
T Consensus       133 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~---  209 (448)
T 3dod_A          133 KPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHE---  209 (448)
T ss_dssp             CTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGG---
T ss_pred             CCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCC---
Confidence            0012345555555 444433333322            13455665554444           48999999973221   


Q ss_pred             ccEEEEEEcCC-CCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         295 IPFFVCGTLGT-TGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       295 ~p~~Vv~t~Gt-T~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      .+.+|++.-.. ++.|.+-+    +++|+++|++||++|++|.+|.+.......+.....++ ..|.++++  |.++..+
T Consensus       210 ~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~s--K~l~~G~  286 (448)
T 3dod_A          210 EIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAAG--KGITGGY  286 (448)
T ss_dssp             GEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTS
T ss_pred             CEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEec--ccccCCc
Confidence            24455555444 66776654    99999999999999999999986432211111112233 36878775  9876553


Q ss_pred             -cceee
Q psy1596         370 -DCTAM  374 (375)
Q Consensus       370 -~~g~l  374 (375)
                       ..|++
T Consensus       287 ~~ig~v  292 (448)
T 3dod_A          287 LPIAVT  292 (448)
T ss_dssp             SCCEEE
T ss_pred             CceEEE
Confidence             45543

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.14  E-value=1.6e-09  Score=107.57  Aligned_cols=164  Identities=12%  Similarity=0.054  Sum_probs=100.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.++|+++++-+                      ...+||+|||+||..|+.++|...                .
T Consensus        93 ~~~~~la~~l~~~~~~~----------------------~~v~~~~sGsea~~~al~~a~~~~----------------~  134 (429)
T 4e77_A           93 EMEVKMAQLVTDLVPTM----------------------DMVRMVNSGTEATMSAIRLARGYT----------------G  134 (429)
T ss_dssp             HHHHHHHHHHHHHSTTC----------------------SEEEEESSHHHHHHHHHHHHHHHH----------------C
T ss_pred             HHHHHHHHHHHhhCCCC----------------------CEEEEeCcHHHHHHHHHHHHHHhh----------------C
Confidence            34478889999987622                      358999999999999999887531                0


Q ss_pred             CceEEEecCCCchHHHHHHHHcC-------------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEE
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGL-------------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCG  301 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~-------------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~  301 (375)
                      +..+|.....-|.....++...+                   ..+..+|.+     |+++|+++|++...   .+.+|++
T Consensus       135 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~---~~~~vi~  206 (429)
T 4e77_A          135 RDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYN-----DLASVRQAFEQYPQ---EVACIIV  206 (429)
T ss_dssp             CCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTT-----CHHHHHHHHHHSTT---TEEEEEE
T ss_pred             CCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCC-----CHHHHHHHHHhcCC---CEEEEEE
Confidence            12345555555655443321111                   022333322     89999999975321   2445555


Q ss_pred             EcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         302 TLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       302 t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +-.+...|.+.+    +++|.++|++||++|++|++|++. .....+.....++ ..|.++++  |.++..+..|++
T Consensus       207 ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t~s--K~~~~G~~~G~~  279 (429)
T 4e77_A          207 EPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTCLG--KIIGGGMPVGAF  279 (429)
T ss_dssp             CSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEEEE--GGGGTTSCCEEE
T ss_pred             CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeeeec--ccccCCCCeEEE
Confidence            544455677777    999999999999999999999965 3221111112233 35776665  888765566654

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.14  E-value=8.7e-10  Score=109.29  Aligned_cols=172  Identities=14%  Similarity=0.061  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.+.+++++|.+.                     ...+||+|||+||..++.+++...                .
T Consensus        85 ~~~~~l~~~la~~~~~~~---------------------~~v~~~~gg~ea~~~a~~~~~~~~----------------~  127 (433)
T 1zod_A           85 RPVVDLATRLANITPPGL---------------------DRALLLSTGAESNEAAIRMAKLVT----------------G  127 (433)
T ss_dssp             HHHHHHHHHHHHHSCTTC---------------------CEEEEESCHHHHHHHHHHHHHHHH----------------T
T ss_pred             HHHHHHHHHHHHhCCCCc---------------------CEEEEeCchHHHHHHHHHHHHHhh----------------C
Confidence            344778888999887641                     358999999999999998876421                0


Q ss_pred             CceEEEecCCCchHHHHHHHHcC-----------CeEEEEecCCC------------CCcCHHHHHHHHHHhhhcCCccE
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGL-----------VKMRYIESDDK------------LSLRGDKLIEAIERDKKKHLIPF  297 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~-----------~~v~~Vp~d~~------------g~md~e~Le~aI~~~~~~g~~p~  297 (375)
                      ++.+|+.+..-|.+..-+..+.+           ..++.++....            +.+|+++|+++|++..  +..+.
T Consensus       128 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--~~~~~  205 (433)
T 1zod_A          128 KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQS--SGNLA  205 (433)
T ss_dssp             CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHC--CSCEE
T ss_pred             CCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcC--CCCeE
Confidence            12244444455655555443321           24556655321            1357999999997531  11244


Q ss_pred             EEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         298 FVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       298 ~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +|+++-..+++|.+-+    +++|+++|++||++|++|++|++.....+.+.....++ ..|.++++  |+++..+..|.
T Consensus       206 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~s~s--K~~~~G~~ig~  282 (433)
T 1zod_A          206 AFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILTLS--KTLGAGLPLAA  282 (433)
T ss_dssp             EEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--HHHHTTSSCEE
T ss_pred             EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEEEec--ccccCCCCeeE
Confidence            5555443456887655    99999999999999999999986432111111011133 35776665  98876666665


Q ss_pred             e
Q psy1596         374 M  374 (375)
Q Consensus       374 l  374 (375)
                      +
T Consensus       283 ~  283 (433)
T 1zod_A          283 I  283 (433)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.13  E-value=1.6e-09  Score=109.01  Aligned_cols=176  Identities=11%  Similarity=-0.002  Sum_probs=105.7

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..+.+.++.++|+++++.+                    .....+||+|||+||..|+.++|...               
T Consensus       102 ~~~~~~~la~~l~~~~~~~--------------------~~~~v~~~~sGseA~~~Alk~a~~~~---------------  146 (451)
T 3oks_A          102 PYEGYVAVCEQLNRLTPVR--------------------GDKRSALFNSGSEAVENAVKIARSHT---------------  146 (451)
T ss_dssp             CCHHHHHHHHHHHHHSSCC--------------------SSEEEEEESSHHHHHHHHHHHHHHHH---------------
T ss_pred             CCHHHHHHHHHHHHhCCcC--------------------CCCEEEEeCcHHHHHHHHHHHHHHhc---------------
Confidence            3444578899999998643                    22358999999999999999888642               


Q ss_pred             hcCceEEEecCCCchHHHHHHHHcCC-------------eEEEEecCCCCC-----c--------CHHHHHHHHHHhhhc
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLIGLV-------------KMRYIESDDKLS-----L--------RGDKLIEAIERDKKK  292 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~-------------~v~~Vp~d~~g~-----m--------d~e~Le~aI~~~~~~  292 (375)
                       .++.+|.....-|-...-+..+++.             .++.+|....++     +        +.+.++++|++... 
T Consensus       147 -g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~-  224 (451)
T 3oks_A          147 -HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIG-  224 (451)
T ss_dssp             -CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTC-
T ss_pred             -CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcC-
Confidence             0122444445556554444444321             466777542111     1        34555566654321 


Q ss_pred             CCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         293 HLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       293 g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +..+.+|++.-.....|.+-+    +++|.++|++||++|++|.+|.+.......+.....++ ..|.++++  |.++..
T Consensus       225 ~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~s--K~l~~G  301 (451)
T 3oks_A          225 ADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVTA--KGIAGG  301 (451)
T ss_dssp             GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTT
T ss_pred             CCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeeeh--hhhhCC
Confidence            122444554444444566644    99999999999999999999986532211111111233 45777765  988765


Q ss_pred             Ccceee
Q psy1596         369 FDCTAM  374 (375)
Q Consensus       369 ~~~g~l  374 (375)
                      +..|.+
T Consensus       302 ~~iG~v  307 (451)
T 3oks_A          302 LPLSAV  307 (451)
T ss_dssp             SSCEEE
T ss_pred             cceEEE
Confidence            555543

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.13  E-value=5.1e-10  Score=107.22  Aligned_cols=137  Identities=12%  Similarity=-0.024  Sum_probs=102.6

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG  279 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~  279 (375)
                      ...++|+|||+++..++.+.                      +..|+++ .+|.++...+...|.+++.+|.++++.+|+
T Consensus        77 ~~v~~~~G~~~al~~~~~~~----------------------gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~  133 (335)
T 1uu1_A           77 NNVSVGNGADEIIYVMMLMF----------------------DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPE  133 (335)
T ss_dssp             GGEEEESSHHHHHHHHHHHS----------------------SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCC
T ss_pred             HHEEEcCChHHHHHHHHHHh----------------------CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCH
Confidence            35899999999988877654                      1258888 999999988877788999999987788998


Q ss_pred             HHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEE
Q psy1596         280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF  359 (375)
Q Consensus       280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~  359 (375)
                      ++|     +      .+.+|+.+.++++||.+-+.++|.++++..| ++++|++|+....- +-. ..+. ....+.+..
T Consensus       134 ~~l-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~-~~~-~~~~-~~~~~i~~~  198 (335)
T 1uu1_A          134 VNV-----G------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGE-SYV-DFLK-KYENLAVIR  198 (335)
T ss_dssp             CCC-----C------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC-CCG-GGGG-TCSSEEEEE
T ss_pred             HHc-----C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcch-hHH-HHhh-hCCCEEEEe
Confidence            877     1      1457777888999999999999999999989 99999999853210 101 1111 123467889


Q ss_pred             cCcccCCCC-Ccceee
Q psy1596         360 NPSKWLMVH-FDCTAM  374 (375)
Q Consensus       360 d~HK~l~~P-~~~g~l  374 (375)
                      +++|+++.| ..+|.+
T Consensus       199 s~sK~~g~~G~r~G~~  214 (335)
T 1uu1_A          199 TFSKAFSLAAQRVGYV  214 (335)
T ss_dssp             ESTTTTTCGGGCCEEE
T ss_pred             cchhhcCCcccCeEEE
Confidence            999998643 235654

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.13  E-value=1.7e-09  Score=107.99  Aligned_cols=169  Identities=12%  Similarity=0.060  Sum_probs=118.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCC--cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPN--FITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~--~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .|..++++++.+|+.+..+.+.                   .+.  ..++|+||++|+..++.+..+.            
T Consensus        72 ~G~~~lr~aia~~~~~~~~~~~-------------------~~~~i~i~~t~G~~~al~~~~~~l~~~------------  120 (405)
T 3k7y_A           72 NGTEDFSTLTQNLIFGNNSKYI-------------------EDKKICTIQCIGGTGAIFVLLEFLKML------------  120 (405)
T ss_dssp             SSCHHHHHHHHHHHHCSSCTTT-------------------TTTCEEEEEEEHHHHHHHHHHHHHHTT------------
T ss_pred             CCcHHHHHHHHHHHcCCCCccc-------------------cccceEEEEcCchHHHHHHHHHHHHhc------------
Confidence            4666677888888865433331                   112  4689999999988777654321            


Q ss_pred             hhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec-C-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC-CCCcccc
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES-D-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG-TTGACAF  311 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~-d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGav  311 (375)
                           .+ ..|++++.++......++..|.+++.||. + +++.+|+++|++++++...    ..+|+.+.+ +|+||.+
T Consensus       121 -----~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~----~~~i~l~~~~~NPTG~~  190 (405)
T 3k7y_A          121 -----NV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPN----GSSVILQISCYNPCSVN  190 (405)
T ss_dssp             -----TC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCS----SCEEEECCSSCTTTCCC
T ss_pred             -----CC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCC----CeEEEEeCCCCCCCCCC
Confidence                 13 57999999999999999998999999997 3 3588999999999975311    235666654 7999988


Q ss_pred             ---ccHHHHHHHHHhcCCEEEEecccccCcccc--h---hhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         312 ---DNLEELGPICEKEGLWLHVDAAYAGSSFIC--P---EFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       312 ---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~--~---~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                         +.+++|+++|++|++|+++|.+|.....-.  .   ..+.....-++ =.+.-++.|.++.
T Consensus       191 ~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~l  253 (405)
T 3k7y_A          191 IEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIA-FSVCQSFSKNMSL  253 (405)
T ss_dssp             CCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCC-EEEEEECTTTSCC
T ss_pred             CCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCc-EEEEeeCCccCCC
Confidence               678889999999999999999998754210  0   11221111011 1345689998764

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.13  E-value=2.3e-10  Score=113.44  Aligned_cols=167  Identities=13%  Similarity=-0.007  Sum_probs=109.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .+..++++++.+|+.+-++.+                     +...+||+|+++++.. +....                
T Consensus        98 ~g~~~l~~~ia~~~~~~~~~~---------------------~~~i~~t~G~~~al~~-l~~l~----------------  139 (432)
T 3ei9_A           98 QGAKPLRAAIAKTFYGGLGIG---------------------DDDVFVSDGAKCDISR-LQVMF----------------  139 (432)
T ss_dssp             TCCHHHHHHHHHHHHTTTTCC---------------------GGGEEEESCHHHHHHH-HHHHH----------------
T ss_pred             CCCHHHHHHHHHHHHccCCCC---------------------cceEEECCChHHHHHH-HHHHc----------------
Confidence            356677788888887633333                     3468999999998764 32211                


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcC------------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                         .++..|++++.+|.++..++++.+            .+++.+|.++++.++.+ |++    .    ..+.+|+++.+
T Consensus       140 ---~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~----~----~~~~~v~l~~p  207 (432)
T 3ei9_A          140 ---GSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD-LST----V----GRTDIIFFCSP  207 (432)
T ss_dssp             ---CTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCC-GGG----C----CCCSEEEEESS
T ss_pred             ---CCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCC-hhh----C----CCCCEEEEeCC
Confidence               134578999999999999886543            36788888653322222 222    1    12446777789


Q ss_pred             CCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccc-h-hhhhhhcCCCcccEEEEcCcccCC-CCCcceee
Q psy1596         305 TTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFIC-P-EFRKWLAGVEYANSIAFNPSKWLM-VHFDCTAM  374 (375)
Q Consensus       305 tT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~-~-~~~~~~~gie~aDSi~~d~HK~l~-~P~~~g~l  374 (375)
                      ++++|.+   +++++|+++|++||+++++|+||+.+..-. + .... +.+....+.+..+++|+++ ....+|.+
T Consensus       208 ~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~~G~r~G~~  282 (432)
T 3ei9_A          208 NNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFE-IPGAEEVAMETASFSNYAGFTGVRLGWT  282 (432)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGG-STTGGGTEEEEEESHHHHCTTTTCCEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhh-cCCCCCeEEEEecchhccCCcccceEEE
Confidence            9999987   568888888999999999999999753211 0 0111 1122234678899999986 33445553

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.12  E-value=7.9e-10  Score=109.92  Aligned_cols=165  Identities=14%  Similarity=0.024  Sum_probs=104.2

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ..++.++.++|+++++ .                     ....+||+|||+||..++.+||...                
T Consensus        95 ~~~~~~l~~~la~~~~-~---------------------~~~v~~~~sgseA~~~al~~ar~~~----------------  136 (434)
T 2epj_A           95 GEAEVLLAEKILGYVK-R---------------------GGMIRFVNSGTEATMTAIRLARGYT----------------  136 (434)
T ss_dssp             CHHHHHHHHHHHHHHC-T---------------------TCEEEEESSHHHHHHHHHHHHHHHH----------------
T ss_pred             CHHHHHHHHHHHHhCC-C---------------------CCEEEEeCCHHHHHHHHHHHHHHhh----------------
Confidence            3445788899999884 2                     1247999999999999999887531                


Q ss_pred             cCceEEEecCCCchHHHHHH--------H-----HcCC------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEE
Q psy1596         240 NSRLVAYCSDQAHSSVEKAG--------L-----IGLV------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVC  300 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa--------~-----lg~~------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv  300 (375)
                      .++.+|+....-|.....+.        .     ..+.      .+..+|.     .|+++|+++|++...   .+.+|+
T Consensus       137 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~---~~~~vi  208 (434)
T 2epj_A          137 GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYGD---RIAGVI  208 (434)
T ss_dssp             CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHGG---GEEEEE
T ss_pred             CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCCC---CEEEEE
Confidence            01224444433343222111        0     1121      3566664     389999999975311   244666


Q ss_pred             EEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         301 GTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       301 ~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++-..+++|.+-+    +++|.++|++||++|++|++|++. ...+.+.....++ ..|.+++  +|+++..+..|++
T Consensus       209 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v  282 (434)
T 2epj_A          209 VEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDIIVL--GKIIGGGFPVGAV  282 (434)
T ss_dssp             ECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEE
T ss_pred             EeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCeeee--cchhcCCcceeee
Confidence            6655566898877    999999999999999999999965 3222111111233 3577655  5988774555654

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.12  E-value=1.1e-09  Score=109.65  Aligned_cols=166  Identities=11%  Similarity=0.011  Sum_probs=101.3

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..+++.++.+|++++++ +                     ....+||+|||+|+..++.+||...               
T Consensus        95 ~~~~~~~la~~l~~~~~-~---------------------~~~v~~~~gg~eA~~~al~~ar~~~---------------  137 (453)
T 2cy8_A           95 SHPLEVRWAERIVAAFP-S---------------------IRKLRFTGSGTETTLLALRVARAFT---------------  137 (453)
T ss_dssp             SCHHHHHHHHHHHHHCT-T---------------------CSEEEEESCHHHHHHHHHHHHHHHH---------------
T ss_pred             CCHHHHHHHHHHHhhCC-C---------------------CCEEEEeCCHHHHHHHHHHHHHHhh---------------
Confidence            55677899999999875 3                     1358999999999999999887521               


Q ss_pred             hcCceEEEecCCCchHHHHHHHH----------cCC------eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEE
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLI----------GLV------KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGT  302 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~l----------g~~------~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t  302 (375)
                       .++.+|+....-|....-+..+          .+.      .+..+|.     .|+++|+++|++...   .+.+|+++
T Consensus       138 -~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~---~~~~vi~e  208 (453)
T 2cy8_A          138 -GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHGS---DIAAFIAE  208 (453)
T ss_dssp             -CCCEEEEECC----------------------------CGGGEEEECT-----TCHHHHHHHHHHHGG---GEEEEEEC
T ss_pred             -CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcCC---CEEEEEEC
Confidence             0222444443334222211111          111      2444443     389999999975311   24455555


Q ss_pred             cCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         303 LGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       303 ~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      -..+++|.+-+    +++|.++|++||++|++|++|++. ...+.......++ ..|.+++  .|+++..+..|++
T Consensus       209 p~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v  280 (453)
T 2cy8_A          209 PVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLTCL--AKASAGGLPGGIL  280 (453)
T ss_dssp             SSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEE
T ss_pred             CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEEEE--ChhhhCCcceEEE
Confidence            44455898766    999999999999999999999865 3222111111233 3576654  5998866667765

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.11  E-value=8.5e-10  Score=108.38  Aligned_cols=145  Identities=12%  Similarity=-0.026  Sum_probs=96.1

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCe-EEEEecCCCCCcC
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVK-MRYIESDDKLSLR  278 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~-v~~Vp~d~~g~md  278 (375)
                      ...++|+|+++++..++... .                   ++..|++.+.+|.++..++...|.+ ++.+|.++++.++
T Consensus        96 ~~v~~~~G~~~al~~~~~~~-~-------------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  155 (400)
T 3asa_A           96 KEIFISDGAKVDLFRLLSFF-G-------------------PNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFF  155 (400)
T ss_dssp             GGEEEESCHHHHHHHHHHHH-C-------------------SSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTC
T ss_pred             HHEEEccChHHHHHHHHHHc-C-------------------CCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcc
Confidence            46899999999977643211 1                   2347888999999999888777777 9999987543333


Q ss_pred             HHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC---
Q psy1596         279 GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE---  352 (375)
Q Consensus       279 ~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie---  352 (375)
                      .+ +++.        ..+.+|+.+.++++||.+-+   +++|+++|+++|+++++|++|+....- +.....+..+.   
T Consensus       156 ~~-l~~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~  225 (400)
T 3asa_A          156 PE-FPED--------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISD-PSLPKSIFEIPDAR  225 (400)
T ss_dssp             CC-CCTT--------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCC-TTSCSSGGGSTTGG
T ss_pred             cC-hhhc--------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcC-CCCCCchhhCCCCC
Confidence            21 2211        12446777789999999854   778899999999999999999964221 10000111221   


Q ss_pred             cccEEEEcCcccCCCC-Ccceee
Q psy1596         353 YANSIAFNPSKWLMVH-FDCTAM  374 (375)
Q Consensus       353 ~aDSi~~d~HK~l~~P-~~~g~l  374 (375)
                      ..+.+..+++|+++.| +.+|.+
T Consensus       226 ~~~i~~~s~sK~~g~~GlriG~~  248 (400)
T 3asa_A          226 FCAIEINSFSKPLGFAGIRLGWT  248 (400)
T ss_dssp             GTEEEEEECCGGGTTTTCCCEEE
T ss_pred             CceEEEecchhhcCCcchheeEE
Confidence            1246789999998633 345654

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.10  E-value=3.6e-09  Score=106.48  Aligned_cols=175  Identities=11%  Similarity=0.057  Sum_probs=102.2

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ....+.++.++|+++++.+                    .....+||+|||+||..|+.++|...               
T Consensus       105 ~~~~~~~la~~l~~~~~~~--------------------~~~~v~~~~sGseA~~~alk~a~~~~---------------  149 (453)
T 4ffc_A          105 PYEQYVQVAELLNALTPGD--------------------HDKRTALFNSGAEAVENAIKVARLAT---------------  149 (453)
T ss_dssp             CCHHHHHHHHHHHHHSSCS--------------------SCEEEEEESSHHHHHHHHHHHHHHHH---------------
T ss_pred             CCHHHHHHHHHHHHhCCCC--------------------CCcEEEEeCcHHHHHHHHHHHHHHhc---------------
Confidence            3445578899999998744                    22468999999999999999887631               


Q ss_pred             hcCceEEEecCCCchHHHHHHHHcCC-------------eEEEEecC----CCCCcC-HHHHHHHH---HHhhhcCCccE
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLIGLV-------------KMRYIESD----DKLSLR-GDKLIEAI---ERDKKKHLIPF  297 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~-------------~v~~Vp~d----~~g~md-~e~Le~aI---~~~~~~g~~p~  297 (375)
                       .++.+|.....-|-...-+..+++.             .+..+|..    +...++ .+.++..+   ++... ...+.
T Consensus       150 -g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~-~~~~a  227 (453)
T 4ffc_A          150 -GRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIG-AQSLA  227 (453)
T ss_dssp             -CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTC-GGGEE
T ss_pred             -CCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcC-CCCEE
Confidence             0123444555556555544444321             46667764    211233 23333222   22111 11233


Q ss_pred             EEEEEcCCCC-cccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         298 FVCGTLGTTG-ACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       298 ~Vv~t~GtT~-tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      +|++ .+.+. .|.+-+    +++|.++|++||++|++|.+|.+.......+.....++ ..|.++++  |.++..+..|
T Consensus       228 avi~-ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~s--K~~~~G~~~G  303 (453)
T 4ffc_A          228 AIII-EPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTMA--KGIAGGMPLS  303 (453)
T ss_dssp             EEEE-CSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCE
T ss_pred             EEEE-cCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhhh--hhhcCCcCeE
Confidence            4444 44444 455544    99999999999999999999986532211111111233 35777775  8876655555


Q ss_pred             ee
Q psy1596         373 AM  374 (375)
Q Consensus       373 ~l  374 (375)
                      .+
T Consensus       304 ~~  305 (453)
T 4ffc_A          304 AV  305 (453)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.09  E-value=1.2e-09  Score=110.34  Aligned_cols=176  Identities=14%  Similarity=0.042  Sum_probs=108.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ....++.++|+++++.+.                     ...+||+|||+||..|+.+++.....+ +  .+       .
T Consensus       118 ~~~~~L~e~la~~~~~~~---------------------~~v~~~~sGseA~~~Alk~a~~~~~~~-g--~~-------g  166 (457)
T 3tfu_A          118 EPAARLAKLLVDITPAGL---------------------DTVFFSDSGSVSVEVAAKMALQYWRGR-G--LP-------G  166 (457)
T ss_dssp             HHHHHHHHHHHHHSSTTE---------------------EEEEEESSHHHHHHHHHHHHHHHHHHT-T--CT-------T
T ss_pred             HHHHHHHHHHHHhCCCCc---------------------CEEEEeCcHHHHHHHHHHHHHHHHHhc-C--CC-------C
Confidence            344788999999986541                     258999999999999999998753221 0  00       0


Q ss_pred             CceEEEecCCCchHHHHHHHHcC-------------CeEEEEec--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEc-C
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGL-------------VKMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL-G  304 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~-G  304 (375)
                      +..+|.....-|.+..-+..+++             ..+..+|.  +.....|+++|+++|++...   .+.+|++.- .
T Consensus       167 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~---~~aavi~ep~~  243 (457)
T 3tfu_A          167 KRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG---ELAAVVVEPVV  243 (457)
T ss_dssp             CCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG---GEEEEEECSSE
T ss_pred             CceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC---CEEEEEEeCCC
Confidence            12344444555554433333311             12333333  33334689999999985321   244666665 5


Q ss_pred             CCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC-ccee
Q psy1596         305 TTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF-DCTA  373 (375)
Q Consensus       305 tT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~-~~g~  373 (375)
                      ++++|.+-+    +++|.++|++||++|++|++|.+....-..+.....++ ..|.++++  |.+...+ ..|+
T Consensus       244 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdiit~s--K~l~gG~~~lG~  314 (457)
T 3tfu_A          244 QGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIMCVG--KALTGGYLSLAA  314 (457)
T ss_dssp             ECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCCEE
T ss_pred             cCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCC-CceEEEEC--hhhhCCCcceEE
Confidence            677887754    99999999999999999999986432111111111233 46888665  8776542 4443

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.09  E-value=6.2e-10  Score=111.86  Aligned_cols=172  Identities=10%  Similarity=-0.052  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHh-hccCCcchhhhhc
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKY-QQSHPELEHAEIN  240 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~-~~~~~~~~~~~~~  240 (375)
                      ...++.+.|+++++-.                    .....+||+|||+||..|+.++|.....+. ..+.+      ..
T Consensus       102 ~~~~la~~la~~~~~~--------------------~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~------~~  155 (449)
T 2cjg_A          102 AMARFVETFARVLGDP--------------------ALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGID------PA  155 (449)
T ss_dssp             HHHHHHHHHHHHHCCT--------------------TCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSC------TT
T ss_pred             HHHHHHHHHHHhcCCC--------------------CCCEEEEeCchHHHHHHHHHHHHHHhcccccccccc------cC
Confidence            3367788888888722                    224689999999999999998875322100 00000      00


Q ss_pred             CceEEEecCCC-chHHHHHHHHcC-------------CeEEEEecCC--CC--------CcCHHHHHHHHHHhhhcCCcc
Q psy1596         241 SRLVAYCSDQA-HSSVEKAGLIGL-------------VKMRYIESDD--KL--------SLRGDKLIEAIERDKKKHLIP  296 (375)
Q Consensus       241 ~~~vV~~S~~a-H~Sv~kaa~lg~-------------~~v~~Vp~d~--~g--------~md~e~Le~aI~~~~~~g~~p  296 (375)
                      ++..|++.+.+ |.+..-++.+++             ..++.+|.++  ..        ..++++|+++|++..   ..+
T Consensus       156 ~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~---~~~  232 (449)
T 2cjg_A          156 LGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRP---HDI  232 (449)
T ss_dssp             CCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHST---TTE
T ss_pred             CCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcC---Cce
Confidence            13355565554 433332222222             2567777654  11        356778999987421   124


Q ss_pred             EEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccC
Q psy1596         297 FFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWL  365 (375)
Q Consensus       297 ~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l  365 (375)
                      .+|+++-.++++|.+-+    +++|.++|++||++|++|++|++....-..+.....++ ..|.++++  |++
T Consensus       233 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l  302 (449)
T 2cjg_A          233 ACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAFG--KKT  302 (449)
T ss_dssp             EEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGG
T ss_pred             EEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEec--Ccc
Confidence            46666655567897665    99999999999999999999996432111001111233 35888765  987

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.07  E-value=8.2e-09  Score=103.74  Aligned_cols=177  Identities=15%  Similarity=0.019  Sum_probs=109.1

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ......++.+||+++++.+                     ....+||+|||+||..|+.+++.....+ +          
T Consensus        92 ~~~~~~~la~~l~~~~~~~---------------------~~~v~~~~ggseA~~~al~~~~~~~~~~-g----------  139 (459)
T 4a6r_A           92 THPAVVELSSLLAEVTPAG---------------------FDRVFYTNSGSESVDTMIRMVRRYWDVQ-G----------  139 (459)
T ss_dssp             CCHHHHHHHHHHHHHSCTT---------------------CCEEEEESSHHHHHHHHHHHHHHHHHHT-T----------
T ss_pred             CCHHHHHHHHHHHHhCCCC---------------------CCEEEEeCchHHHHHHHHHHHHHHHHhc-C----------
Confidence            3455588999999998654                     1358999999999999999998753221 0          


Q ss_pred             hcCceEEEe-cCCCchHHHHHHHHcC------------CeEEEEecC-----CCCCcC--------HHHHHHHHHHhhhc
Q psy1596         239 INSRLVAYC-SDQAHSSVEKAGLIGL------------VKMRYIESD-----DKLSLR--------GDKLIEAIERDKKK  292 (375)
Q Consensus       239 ~~~~~vV~~-S~~aH~Sv~kaa~lg~------------~~v~~Vp~d-----~~g~md--------~e~Le~aI~~~~~~  292 (375)
                      ..++..|++ ...-|....-+..+++            ..+..++..     .++ +|        +++|+++|++... 
T Consensus       140 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~-  217 (459)
T 4a6r_A          140 KPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGA-  217 (459)
T ss_dssp             CTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG-
T ss_pred             CCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCC-
Confidence            012334444 4444544433433332            134555532     122 56        7889998875211 


Q ss_pred             CCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         293 HLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       293 g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                       ..+.+|++.-..+..|.+-+    +++|.++|++||++|++|.+|.+.......+.....++ ..|.++++  |.+...
T Consensus       218 -~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg  293 (459)
T 4a6r_A          218 -DKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTAA--KGLSSG  293 (459)
T ss_dssp             -GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEEC--GGGGTT
T ss_pred             -CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeehh--hhhcCC
Confidence             12445666555556677666    99999999999999999999986532211111112233 46888876  876543


Q ss_pred             -Cccee
Q psy1596         369 -FDCTA  373 (375)
Q Consensus       369 -~~~g~  373 (375)
                       +..|.
T Consensus       294 ~~~lg~  299 (459)
T 4a6r_A          294 YLPIGA  299 (459)
T ss_dssp             SSCCEE
T ss_pred             CCCccc
Confidence             34444

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.05  E-value=6.6e-09  Score=104.49  Aligned_cols=178  Identities=13%  Similarity=0.008  Sum_probs=109.9

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ....+.++.++|+++++.+                     ....+||+|||+||..|+.+++.....+ +          
T Consensus        93 ~~~~~~~la~~l~~~~~~~---------------------~~~v~~~~gGseA~~~al~~~~~~~~~~-g----------  140 (460)
T 3gju_A           93 GTEASITLAKMIIDRAPKG---------------------MSRVYFGLSGSDANETNIKLIWYYNNVL-G----------  140 (460)
T ss_dssp             CCHHHHHHHHHHHHHSCTT---------------------EEEEEEESSHHHHHHHHHHHHHHHHHHT-T----------
T ss_pred             CCHHHHHHHHHHHhhCCCC---------------------cCEEEEeCchHHHHHHHHHHHHHHHHhc-C----------
Confidence            4445588899999986543                     1358999999999999999998753211 0          


Q ss_pred             hcCce-EEEecCCCchHHHHHHHHcCC------------eEEEEecCC-----CCCcC--------HHHHHHHHHHhhhc
Q psy1596         239 INSRL-VAYCSDQAHSSVEKAGLIGLV------------KMRYIESDD-----KLSLR--------GDKLIEAIERDKKK  292 (375)
Q Consensus       239 ~~~~~-vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~-----~g~md--------~e~Le~aI~~~~~~  292 (375)
                      ..++. +|.....-|.+..-++.+++.            .++.+|...     +..++        +++|+++|++... 
T Consensus       141 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~-  219 (460)
T 3gju_A          141 RPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGP-  219 (460)
T ss_dssp             CTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCG-
T ss_pred             CCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCC-
Confidence            01223 444445556555544444321            356666421     11234        6889998875211 


Q ss_pred             CCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         293 HLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       293 g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                       ..+.+|++.-.++.+|.+-+    +++|.++|++||++|++|.+|.+.....+.+.....++ ..|.++++  |.+...
T Consensus       220 -~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG  295 (460)
T 3gju_A          220 -ETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSA  295 (460)
T ss_dssp             -GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTT
T ss_pred             -CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCC
Confidence             12456666665666677544    99999999999999999999986532211111111233 35888775  987654


Q ss_pred             -Cccee
Q psy1596         369 -FDCTA  373 (375)
Q Consensus       369 -~~~g~  373 (375)
                       +..|.
T Consensus       296 ~~~lg~  301 (460)
T 3gju_A          296 YAPLSG  301 (460)
T ss_dssp             SSCCEE
T ss_pred             CCCeEE
Confidence             34454

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.01  E-value=1.2e-08  Score=103.67  Aligned_cols=178  Identities=15%  Similarity=0.080  Sum_probs=111.2

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ......++.++|+++++.+                     ....+|++|||+||..|+.++|.....+ +  .+      
T Consensus        97 ~~~~~~~lae~l~~~~~~~---------------------~~~v~~~~sGseA~~~aik~a~~~~~~~-g--~~------  146 (472)
T 3hmu_A           97 THVPAIALAQKLAELAPGD---------------------LNHVFFAGGGSEANDTNIRMVRTYWQNK-G--QP------  146 (472)
T ss_dssp             ECHHHHHHHHHHHHHSCTT---------------------EEEEEEESSHHHHHHHHHHHHHHHHHHT-T--CT------
T ss_pred             CCHHHHHHHHHHHHhCCCC---------------------CCEEEEeCCHHHHHHHHHHHHHHHHHhc-C--CC------
Confidence            3444578889999987643                     1358999999999999999998753221 0  00      


Q ss_pred             hcCceEEEecCCCchHHHHHHHHcCC-----------eEEEEecCC-----CCCcC--------HHHHHHHHHHhhhcCC
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLIGLV-----------KMRYIESDD-----KLSLR--------GDKLIEAIERDKKKHL  294 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~-----------~v~~Vp~d~-----~g~md--------~e~Le~aI~~~~~~g~  294 (375)
                       .++.+|.....-|-+..-+..+++.           .+..+|...     ++ +|        +++|+++|++...  .
T Consensus       147 -~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~--~  222 (472)
T 3hmu_A          147 -EKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGE--N  222 (472)
T ss_dssp             -TCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--G
T ss_pred             -CCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC--C
Confidence             0123444555556555444444432           355566422     22 45        7889998875311  1


Q ss_pred             ccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-C
Q psy1596         295 IPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-F  369 (375)
Q Consensus       295 ~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~  369 (375)
                      .+.+|++.-..+..|.+-+    +++|.++|++||++|++|.+|.+....-..+.....++ ..|.++++  |.+... +
T Consensus       223 ~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~  299 (472)
T 3hmu_A          223 RVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTIA--KGLSSGYA  299 (472)
T ss_dssp             GEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSS
T ss_pred             CEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeeec--hhhhcCCc
Confidence            2456666655666777766    99999999999999999999987533221111112244 46888876  987654 2


Q ss_pred             ccee
Q psy1596         370 DCTA  373 (375)
Q Consensus       370 ~~g~  373 (375)
                      ..|+
T Consensus       300 plG~  303 (472)
T 3hmu_A          300 PIGG  303 (472)
T ss_dssp             CCEE
T ss_pred             ceEE
Confidence            4443

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.00  E-value=1.4e-08  Score=103.02  Aligned_cols=180  Identities=14%  Similarity=0.048  Sum_probs=111.4

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      +......++.+||+++++.+.                     ...+|++|||+||..|+.++|.....+ +.  +     
T Consensus        94 ~~~~~~~~la~~l~~~~~~~~---------------------~~v~~~~sGseA~~~Aik~a~~~~~~~-g~--~-----  144 (476)
T 3i5t_A           94 MATSPAARLAEKIATLTPGDL---------------------NRIFFTTGGSTAVDSALRFSEFYNNVL-GR--P-----  144 (476)
T ss_dssp             CBCHHHHHHHHHHHTTSSTTC---------------------CEEEEESSHHHHHHHHHHHHHHHHHHT-TC--T-----
T ss_pred             cCCHHHHHHHHHHHhcCCCCc---------------------CEEEEeCchHHHHHHHHHHHHHHHHhc-CC--C-----
Confidence            344556899999999986541                     258999999999999999998753221 00  0     


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCC------------eEEEEecCCC---CCcC--------HHHHHHHHHHhhhcCC
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLV------------KMRYIESDDK---LSLR--------GDKLIEAIERDKKKHL  294 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~------------~v~~Vp~d~~---g~md--------~e~Le~aI~~~~~~g~  294 (375)
                        .+..+|.....-|.+..-+..+++.            .+..++....   ...|        +++|+++|++...  .
T Consensus       145 --~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~--~  220 (476)
T 3i5t_A          145 --QKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP--D  220 (476)
T ss_dssp             --TCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG--G
T ss_pred             --CCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC--C
Confidence              0123455555556555555444331            2344443211   1223        7899999875211  1


Q ss_pred             ccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhh-hcCCCcccEEEEcCcccCCCC-
Q psy1596         295 IPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW-LAGVEYANSIAFNPSKWLMVH-  368 (375)
Q Consensus       295 ~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~-~~gie~aDSi~~d~HK~l~~P-  368 (375)
                      .+.+|++.-..++.|.+-+    |++|.++|++||++|++|.+|.+....-..+... ..++ ..|.++++  |.++.. 
T Consensus       221 ~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~  297 (476)
T 3i5t_A          221 TIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGY  297 (476)
T ss_dssp             GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTS
T ss_pred             CEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCC
Confidence            2456666666666776544    9999999999999999999998753322111111 2344 46888876  887654 


Q ss_pred             Cccee
Q psy1596         369 FDCTA  373 (375)
Q Consensus       369 ~~~g~  373 (375)
                      +..|+
T Consensus       298 ~plg~  302 (476)
T 3i5t_A          298 VPLGG  302 (476)
T ss_dssp             SCCEE
T ss_pred             cCeEE
Confidence            34443

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=98.95  E-value=2e-09  Score=111.53  Aligned_cols=151  Identities=7%  Similarity=-0.013  Sum_probs=105.6

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHc--CCeEEEEecCC--CC
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG--LVKMRYIESDD--KL  275 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg--~~~v~~Vp~d~--~g  275 (375)
                      ...++|+|+++++..++.+...+..              ..++..|++++.+|..+..++.+.  +.+++.||+++  ++
T Consensus       166 ~~I~~t~G~~eal~~~~~~l~~~~l--------------~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~  231 (546)
T 2zy4_A          166 VNLFAVEGGTAAMAYIFESLKLNGL--------------LKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNW  231 (546)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHHHTTS--------------SCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTT
T ss_pred             ceEEEECCHHHHHHHHHHHhhhhhc--------------CCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCC
Confidence            4688999999998877765321100              013457899999999999887654  57888898864  46


Q ss_pred             CcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccc---cHHHHHHHH--HhcCCEEEEecccccCcccchhhhhhhcC
Q psy1596         276 SLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFD---NLEELGPIC--EKEGLWLHVDAAYAGSSFICPEFRKWLAG  350 (375)
Q Consensus       276 ~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavD---pl~eI~~ia--~~~~iwlHVDaA~gg~~~~~~~~~~~~~g  350 (375)
                      .+|+++|++++..      .+.+|+++.++++||.+-   .+++|+++|  +++|++|++|++|+....-.+......  
T Consensus       232 ~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~--  303 (546)
T 2zy4_A          232 QYPDSELDKLKDP------AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAIC--  303 (546)
T ss_dssp             BCCHHHHGGGGST------TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHC--
T ss_pred             CCCHHHHHHhhCC------CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhC--
Confidence            7999999887632      245777778999999984   577788998  789999999999997542111111111  


Q ss_pred             CCcccEEEEcCcccCCCC-Cccee
Q psy1596         351 VEYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       351 ie~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                       ...+.+..+++|+++.| +-+|.
T Consensus       304 -~~~~i~~~S~SK~~g~~GlRiG~  326 (546)
T 2zy4_A          304 -PENTLLVYSFSKYFGATGWRLGV  326 (546)
T ss_dssp             -GGGEEEEEESTTTTTCGGGCEEE
T ss_pred             -CCCEEEEEeCccccCCCCcceEE
Confidence             12467889999988654 22454

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=98.94  E-value=1.3e-08  Score=100.69  Aligned_cols=165  Identities=14%  Similarity=0.057  Sum_probs=103.0

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ...++.++.++|+++++ .                     ....+||+|||+|+..++.+||...               
T Consensus        90 ~~~~~~~l~~~l~~~~~-~---------------------~~~v~~~~~g~ea~~~al~~ar~~~---------------  132 (424)
T 2e7u_A           90 PSPLEVALAKKVKRAYP-F---------------------VDLVRFVNSGTEATMSALRLARGYT---------------  132 (424)
T ss_dssp             CCHHHHHHHHHHHHHCT-T---------------------CCEEEEESSHHHHHHHHHHHHHHHH---------------
T ss_pred             CCHHHHHHHHHHHHhCC-C---------------------CCEEEEeCCHHHHHHHHHHHHHHhh---------------
Confidence            34455788899999874 2                     1257999999999999999887531               


Q ss_pred             hcCceEEEecCCCchHHHHHHHH-------------cC------CeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEE
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLI-------------GL------VKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFV  299 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~l-------------g~------~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~V  299 (375)
                       .++.+|+.+..-|.....+..+             .+      ..++.+|.     .|+++|+++|++...   .+.+|
T Consensus       133 -~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~---~~~~v  203 (424)
T 2e7u_A          133 -GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGE---EIAAI  203 (424)
T ss_dssp             -CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGG---GEEEE
T ss_pred             -CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCC---CEEEE
Confidence             0223444444444322222111             11      13555553     389999999975311   24455


Q ss_pred             EEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         300 CGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       300 v~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      +++-...++|.+-+    +++|.++ ++||++|++|++|++. ...+.......++ ..|.++  ++|+++..+..|++
T Consensus       204 i~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s--~sK~l~~G~~~G~~  277 (424)
T 2e7u_A          204 IFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLVT--LGKILGGGLPAAAY  277 (424)
T ss_dssp             EECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEE--ECGGGGTTSSCEEE
T ss_pred             EEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchhh--hhhhhhCCcceEEE
Confidence            55544445898766    9999999 9999999999999965 3222111112233 357664  46998875566654

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=98.93  E-value=7.1e-09  Score=105.14  Aligned_cols=181  Identities=12%  Similarity=-0.021  Sum_probs=103.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch----
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE----  235 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~----  235 (375)
                      .++++++.++|+++++.+                     ....+|++|||+||..|+.++|.....+.+.. +...    
T Consensus       109 ~~l~~~la~~l~~~~~~~---------------------~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~-~~~t~~~~  166 (472)
T 1ohv_A          109 ENFVEKLRESLLSVAPKG---------------------MSQLITMACGSCSNENAFKTIFMWYRSKERGQ-SAFSKEEL  166 (472)
T ss_dssp             TTHHHHHHHTGGGGCCTT---------------------CCEEEEESSHHHHHHHHHHHHHHHHHHHHHTT-CCCCHHHH
T ss_pred             HHHHHHHHHHHHHhCCCC---------------------cCEEEEeCCchhHHHHHHHHHHHHhhhhccCc-cccccccc
Confidence            455566666677765322                     23589999999999999999985431100000 0000    


Q ss_pred             -------hhhhcCceEEEecCCCchHHHHHHHHcCCe-----------EEEEecCC-CC-------------CcCHHHHH
Q psy1596         236 -------HAEINSRLVAYCSDQAHSSVEKAGLIGLVK-----------MRYIESDD-KL-------------SLRGDKLI  283 (375)
Q Consensus       236 -------~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~-----------v~~Vp~d~-~g-------------~md~e~Le  283 (375)
                             ..+..+..+|.....-|-+..-++.+.+..           +..++... .+             ..|+++|+
T Consensus       167 ~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~  246 (472)
T 1ohv_A          167 ETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVE  246 (472)
T ss_dssp             HHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHH
Confidence                   000001234555555676666555554321           11122211 11             23689999


Q ss_pred             HHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC-cccEEE
Q psy1596         284 EAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-YANSIA  358 (375)
Q Consensus       284 ~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-~aDSi~  358 (375)
                      ++|++....+..+.+|++....+++|.+-+    +++|.++|++||++||+|++|.+....-..+.....|+. ..|.++
T Consensus       247 ~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t  326 (472)
T 1ohv_A          247 DLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMT  326 (472)
T ss_dssp             HHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEE
T ss_pred             HHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEE
Confidence            999763221112556666655677898776    999999999999999999999863221110111112432 368888


Q ss_pred             EcCccc
Q psy1596         359 FNPSKW  364 (375)
Q Consensus       359 ~d~HK~  364 (375)
                      ++  |+
T Consensus       327 ~s--K~  330 (472)
T 1ohv_A          327 FS--KK  330 (472)
T ss_dssp             EC--GG
T ss_pred             Ec--cc
Confidence            77  98

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=98.69  E-value=4.7e-08  Score=98.27  Aligned_cols=121  Identities=11%  Similarity=-0.003  Sum_probs=91.8

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCe-EEEEec--CCCCCc
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVK-MRYIES--DDKLSL  277 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~-v~~Vp~--d~~g~m  277 (375)
                      ..+-|.|||.|...++.......               ..++..|++++.+..+.....+..|.+ +...+.  ++.+.+
T Consensus       111 ~~~qt~ggtga~~~a~~~l~~~~---------------~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~  175 (420)
T 4h51_A          111 VAVQTLSGTGAVSLGAKLLTRVF---------------DAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSL  175 (420)
T ss_dssp             EEEEEEHHHHHHHHHHHHHTTTS---------------CTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEE
T ss_pred             ceeeecCchHHHHHHHHHHHHhc---------------CCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCC
Confidence            35668999999888776543211               014567999999999888888776665 444443  356779


Q ss_pred             CHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596         278 RGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       278 d~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                      |.+.+.+.++...+   ...+++.+.++|+||.+   +.+++|+++|+++++++.+|.+|.+...
T Consensus       176 d~~~~~~~l~~~~~---~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~  237 (420)
T 4h51_A          176 NFEGMKKDILAAPD---GSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYAS  237 (420)
T ss_dssp             CHHHHHHHHHHSCS---SCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTT
T ss_pred             CHHHHHHHHhccCC---CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhcc
Confidence            99999999876433   24567778889999987   7799999999999999999999988653

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=98.58  E-value=4.3e-07  Score=91.87  Aligned_cols=167  Identities=10%  Similarity=-0.025  Sum_probs=109.5

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEE--EeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFIT--FQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~Gv--ftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      -.+++|.-+++...++||.+.                    ..+|+  =.-+|+.||+.+.++..+              
T Consensus        97 ~vD~iE~la~~rak~lF~a~~--------------------A~w~VNVQP~SGs~AN~avy~All~--------------  142 (490)
T 3ou5_A           97 VVDEIELLCQRRALEAFDLDP--------------------AQWGVNVQPYSGSPANLAVYTALLQ--------------  142 (490)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCT--------------------TTEEEECCCSSHHHHHHHHHHHHCC--------------
T ss_pred             HHHHHHHHHHHHHHHHhCCCc--------------------cccCCCCCcCCHHHHHHHHHHHHcC--------------
Confidence            367888999999999999982                    22443  335899999988877643              


Q ss_pred             hhhhcCceEEEecCCC---chHHHH-----HHHHcCC--eEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         236 HAEINSRLVAYCSDQA---HSSVEK-----AGLIGLV--KMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       236 ~~~~~~~~vV~~S~~a---H~Sv~k-----aa~lg~~--~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                           |++.|+.-+..   |.|--.     ...+.+.  +....++| +.+.+|.|+|++..++.+     |.+|++  |
T Consensus       143 -----PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~k-----PklIi~--G  210 (490)
T 3ou5_A          143 -----PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFR-----PRLIIA--G  210 (490)
T ss_dssp             ------CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHC-----CSEEEE--C
T ss_pred             -----CCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcC-----CCeEEE--C
Confidence                 33445544433   433321     1122332  33444455 579999999999988763     665543  5


Q ss_pred             CCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .+..--.-|++++.+||++.|.+|++|.||-.+.+....+..   .+++||.|+.+.||+|..|-|.=+
T Consensus       211 ~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~ps---P~~~ADvVTtTTHKTLrGPrGG~I  276 (490)
T 3ou5_A          211 TSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPS---PFKHADIVTTTTHKTLRGARSGLI  276 (490)
T ss_dssp             CSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCC---GGGTCSEEEEESSSTTCSCSCEEE
T ss_pred             CccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCC---ccccceEEeccccccccCCCceEE
Confidence            566666678999999999999999999999776443222221   245699999999999999986433

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=98.55  E-value=2.1e-07  Score=91.63  Aligned_cols=145  Identities=12%  Similarity=0.020  Sum_probs=98.8

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCC-CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPP-NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~-~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      .++++.+.+|+. ..|.+.                   .+ ...++|+|+++++..++.+..+                 
T Consensus        71 ~~lr~aia~~~~-~~g~~~-------------------~~~~~i~~t~G~~~al~~~~~~l~~-----------------  113 (391)
T 3bwn_A           71 PELEDAIKDLHG-VVGNAA-------------------TEDRYIVVGTGSTQLCQAAVHALSS-----------------  113 (391)
T ss_dssp             HHHHHHHHHHHH-HHCSBC-------------------CSSSEEEEEEHHHHHHHHHHHHHHH-----------------
T ss_pred             HHHHHHHHHHHH-hcCCCC-------------------CCCCeEEEeCChHHHHHHHHHHhcC-----------------
Confidence            566677788877 457653                   22 4689999999998888776543                 


Q ss_pred             hcCce----EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         239 INSRL----VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       239 ~~~~~----vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                        ++.    .|++++.+|.++...++..|.+++.+++|.++ ++         .     ..+.+|+.+.++++||.+-+ 
T Consensus       114 --~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~-l~---------~-----~~~k~v~l~~p~NPtG~~~~-  175 (391)
T 3bwn_A          114 --LARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAWG-FD---------K-----KGPYIELVTSPNNPDGTIRE-  175 (391)
T ss_dssp             --TSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEESTT-CC---------C-----CSCEEEEEESSCTTTCCCCC-
T ss_pred             --CCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHHH-cC---------C-----CCCEEEEECCCCCCCchhHH-
Confidence              233    79999999999999998888888888886543 22         0     12457777899999999875 


Q ss_pred             HHHHHHHHhcC--CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         315 EELGPICEKEG--LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       315 ~eI~~ia~~~~--iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                       +|++  ++++  +++++|.+|+.... .+     +......+.+..++||.++.|
T Consensus       176 -~l~~--~~~~~~~~ii~De~y~~~~~-~~-----l~~~~~~~i~~~S~SK~~g~~  222 (391)
T 3bwn_A          176 -TVVN--RPDDDEAKVIHDFAYYWPHY-TP-----ITRRQDHDIMLFTFSKITGHA  222 (391)
T ss_dssp             -CCC-------CCCEEEEECTTCSTTT-SC-----CCCCBCCSEEEEEHHHHHSCG
T ss_pred             -HHHH--HhhcCCCEEEEeCCCCCCCC-Cc-----cccCCCCeEEEEechhhcCCC
Confidence             5544  2255  99999999984211 11     111123478888999987544

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=98.52  E-value=1.4e-06  Score=88.44  Aligned_cols=159  Identities=14%  Similarity=0.088  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      ++.++.+.|++++.--                      ....|+++|||||..|+..||....                +
T Consensus       128 ~~~~lae~l~~~~p~~----------------------~~v~f~~SGsEA~e~AiklAr~~tg----------------r  169 (454)
T 4ao9_A          128 LEGRLARLICERFPQI----------------------EQLRFTNSGTEANLMALTAALHFTG----------------R  169 (454)
T ss_dssp             SHHHHHHHHHHHSTTC----------------------SEEEEESSHHHHHHHHHHHHHHHHT----------------C
T ss_pred             HHHHHHHHHHHhCCCC----------------------CEEEEeCchHHHHHHHHHHHHhccc----------------C
Confidence            3467777888876321                      3478999999999999999997531                1


Q ss_pred             ceEEEecCCCchHHHHHHHHc-----CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc---
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIG-----LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN---  313 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg-----~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp---  313 (375)
                      +.+|.....-|-...-+....     ......+|.+     |.++|++.|++...   ...+|++.--..+.|.+-|   
T Consensus       170 ~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n-----d~~~l~~~l~~~~~---~iAavIvEPv~g~~G~~~p~~~  241 (454)
T 4ao9_A          170 RKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN-----DAQTARAQIERHGP---EIAVVLVEPMQGASGCIPGQPD  241 (454)
T ss_dssp             CEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT-----CHHHHHHHHHHTGG---GEEEEEECSEESTTTCEECCHH
T ss_pred             CeEEEEeCCcCCccccccccccCccCCCCcccCCCc-----hHHHHHHHHhhcCC---ceEEEEeccccCCCCccCCchh
Confidence            223444444453322111111     1234555543     88999999986532   2445555443445677765   


Q ss_pred             -HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         314 -LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       314 -l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                       |++|.++|++||++|++|.++.|  ...+.+.....|+ ..|.+++.=-..++.|.
T Consensus       242 fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv-~PDi~t~gK~lggG~Pi  295 (454)
T 4ao9_A          242 FLQALRESATQVGALLVFDEVMTS--RLAPHGLANKLGI-RSDLTTLGKYIGGGMSF  295 (454)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGG--GGSTTCHHHHHTC-CCSEEEEEGGGGTTSSC
T ss_pred             hHHHHHHHHhhcCCEEEEECCCcC--CCccccchhccCC-CCcEEEeccccCCCCcc
Confidence             99999999999999999999975  2222222223366 47888876444444444

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=97.85  E-value=1.9e-08  Score=102.50  Aligned_cols=162  Identities=11%  Similarity=0.028  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHcC-CCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         161 KYSSKVLDFVSKENA-TPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       161 ~le~~v~~wLa~llG-~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ..+.++.+.|+++++ .+                       ..+|++|||+||..|+.++|....               
T Consensus       140 ~~~~~Lae~L~~~~p~~~-----------------------~v~~~nSGseA~~~Aik~ar~~tg---------------  181 (465)
T 2yky_A          140 ENEALFAEAVCDRFPSID-----------------------LVRFTNSGTEANLMALATATAITG---------------  181 (465)
Confidence            344677788888773 22                       368999999999999999875321               


Q ss_pred             cCceEEEecCCCchHHHHHH---HHcCC--eEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc-
Q psy1596         240 NSRLVAYCSDQAHSSVEKAG---LIGLV--KMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN-  313 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa---~lg~~--~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp-  313 (375)
                       ++.+|.....-|-+...++   ...+.  .++.+|.     -|+++|+++|++..   ..+.+|++.-..+++|.+-+ 
T Consensus       182 -r~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~~---~~~aavi~epv~~~~G~~~~~  252 (465)
T 2yky_A          182 -RKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRHG---HDCAAILVEPMLGAGGCVPAE  252 (465)
Confidence             1123444444454443332   01122  2333332     37899999997521   12335555443445787655 


Q ss_pred             ---HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         314 ---LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       314 ---l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                         +++|.++|++||++|++|.+|+ + ...+.......|+ ..|.++  +.|+++..+..|.+
T Consensus       253 ~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv-~pDi~t--~sK~lg~G~piG~v  311 (465)
T 2yky_A          253 RAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGI-SADLTT--LGKYIGGGMSFGAF  311 (465)
Confidence               9999999999999999999999 4 2211111111132 356554  56998875556643

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=98.19  E-value=0.00011  Score=74.50  Aligned_cols=169  Identities=10%  Similarity=-0.043  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.|.+++..+                    .....+|+++|||||-.|+..||....                ++.
T Consensus       110 ~~lae~L~~~~p~~--------------------~~~~v~f~~sGsEA~e~AlklAr~~t~----------------r~~  153 (456)
T 4atq_A          110 VAVTEQLNRLTPGD--------------------HAKRTVLFNSGAEAVENAVKVARLATG----------------RDA  153 (456)
T ss_dssp             HHHHHHHHHHSSCS--------------------SCEEEEEESSHHHHHHHHHHHHHHHHC----------------CCE
T ss_pred             HHHHHHHHHhCCCC--------------------CCcEEEEeCChHHHHHHHHHHHhhhhc----------------CCe
Confidence            56777888876433                    122468999999999999999987531                122


Q ss_pred             EEEecCCCchHHHHHHHHc-------------CCeEEEEecCC------CCCcCHHHHHHHHHHhhh--cCCccEEEEEE
Q psy1596         244 VAYCSDQAHSSVEKAGLIG-------------LVKMRYIESDD------KLSLRGDKLIEAIERDKK--KHLIPFFVCGT  302 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg-------------~~~v~~Vp~d~------~g~md~e~Le~aI~~~~~--~g~~p~~Vv~t  302 (375)
                      +|-....-|-...-++.+.             ...+..+|...      ...-+.+.+++.++....  .+..+.+|++-
T Consensus       154 ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivE  233 (456)
T 4atq_A          154 VVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIE  233 (456)
T ss_dssp             EEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEEC
T ss_pred             EEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEec
Confidence            3444444454443333321             12456666421      112345566655543221  12234455554


Q ss_pred             cCCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         303 LGTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       303 ~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      ---...|.+    +-+++|.++|++||+.|++|..+.|....-.-+.....|+ ..|-+++.=--.++.|.
T Consensus       234 Piqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~gK~lggg~P~  303 (456)
T 4atq_A          234 PIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMAKGIAGGLPL  303 (456)
T ss_dssp             SSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEECGGGGTTSSC
T ss_pred             cccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhhhcccCcCCc
Confidence            333344655    3499999999999999999999988544332222333466 47999987433334443

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=98.07  E-value=2.2e-06  Score=85.49  Aligned_cols=155  Identities=7%  Similarity=-0.025  Sum_probs=101.9

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..++++.+.+|+.+..+...                   ++...++|+|+++++..++.+.....     ..      ..
T Consensus       102 ~~~lr~aia~~~~~~~~~~~-------------------~~~~iv~t~G~~~al~~~~~~l~~~~-----~~------~~  151 (427)
T 2hox_A          102 SFELEKTIKELHEVVGNAAA-------------------KDRYIVFGVGVTQLIHGLVISLSPNM-----TA------TP  151 (427)
T ss_dssp             CHHHHHHHHHHHHHHTCBCC-------------------TTCEEEEESHHHHHHHHHHHHHSCCT-----TT------CT
T ss_pred             hHHHHHHHHHHHHHhCCcCC-------------------CCCEEEEeCCHHHHHHHHHHHHhhcc-----cc------cc
Confidence            56777888888877544331                   23468999999999888776541000     00      00


Q ss_pred             hcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         239 INSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       239 ~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ..++..|+++...|.++...++..+.+++.      +.+|+++|++++++.      +.+|+.+.++++||.+-+ + + 
T Consensus       152 ~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~-~-~-  216 (427)
T 2hox_A          152 DAPESKVVAHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVSNPE------QYIEMVTSPNNPEGLLRH-A-V-  216 (427)
T ss_dssp             TSCCEEEEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSCGG------GEEEEEESSCTTTCCCCC-C-S-
T ss_pred             CCCCCEEEEeCCCcccHHHHHHHcCCeeee------ecCCHHHHHHhhcCC------ceEEEEcCCCCCcccccH-H-H-
Confidence            013568999999999999998877766553      346788888877542      447778889999999877 3 2 


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                        ++  +++...|.++.... .+  .... .  ...+.+..+++|.++.|
T Consensus       217 --l~--~~~~i~d~~~~~~~-~s--~~~~-~--~~~~i~~~S~SK~~g~~  256 (427)
T 2hox_A          217 --IK--GCKSIYDMVYYWPH-YT--PIKY-K--ADEDILLFTMSKFTGHS  256 (427)
T ss_dssp             --ST--TCEEEEECTTCSTT-TS--CCCS-C--BCCSEEEEEHHHHTSCG
T ss_pred             --Hc--CCCEEEeecccCCC-CC--cccc-C--CCceEEEEeChhcCCCC
Confidence              33  67888888774311 00  0010 0  23588999999987644

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=97.97  E-value=0.00019  Score=77.97  Aligned_cols=84  Identities=13%  Similarity=0.037  Sum_probs=46.7

Q ss_pred             HHHHHHHHHhh-hcCCccEEEEEEcCC--CCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC
Q psy1596         280 DKLIEAIERDK-KKHLIPFFVCGTLGT--TGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE  352 (375)
Q Consensus       280 e~Le~aI~~~~-~~g~~p~~Vv~t~Gt--T~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie  352 (375)
                      ++|++.|++.. ..+...++.++.-+.  ...|.+-+    +++|.++|++||++|++|.++.|....-..+.....|+ 
T Consensus       577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-  655 (831)
T 4a0g_A          577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC-  655 (831)
T ss_dssp             HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-
T ss_pred             HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-
Confidence            56777775321 011112334444443  34455533    99999999999999999999887533222111112355 


Q ss_pred             cccEEEEcCcccCC
Q psy1596         353 YANSIAFNPSKWLM  366 (375)
Q Consensus       353 ~aDSi~~d~HK~l~  366 (375)
                      ..|.+|+  -|.+.
T Consensus       656 ~PDiitl--sK~L~  667 (831)
T 4a0g_A          656 KPDIACF--AKLLT  667 (831)
T ss_dssp             CCSEEEE--CGGGG
T ss_pred             CCcEEEE--ecccc
Confidence            4687765  57763

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=97.70  E-value=0.0011  Score=67.40  Aligned_cols=166  Identities=9%  Similarity=-0.027  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++.+.|.+++..+                     -....|+.+|||||-.|+..||.....+-+           ..+
T Consensus       113 ~~~lAe~L~~~~p~~---------------------~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~-----------~~r  160 (473)
T 4e3q_A          113 TVMLSEKLVEVSPFD---------------------SGRVFYTNSGSEANDTMVKMLWFLHAAEGK-----------PQK  160 (473)
T ss_dssp             HHHHHHHHHHHSSCS---------------------SCEEEEESSHHHHHHHHHHHHHHHHHHTTC-----------TTC
T ss_pred             HHHHHHHHHhhCCCC---------------------ccEEEEeCchHHHHHHHHHHHHHHHHhcCC-----------CCc
Confidence            366778888886543                     124789999999999999999976433211           122


Q ss_pred             eEEEe-cCCCchHHHHHHHHcC-----------CeEEEEecC------CCCCcC-------HHHHHHHHHHhhhcCCccE
Q psy1596         243 LVAYC-SDQAHSSVEKAGLIGL-----------VKMRYIESD------DKLSLR-------GDKLIEAIERDKKKHLIPF  297 (375)
Q Consensus       243 ~vV~~-S~~aH~Sv~kaa~lg~-----------~~v~~Vp~d------~~g~md-------~e~Le~aI~~~~~~g~~p~  297 (375)
                      ..|++ ...-|-...-++.+.+           .....++..      +.+..+       .++|++.|.+...  ..+.
T Consensus       161 ~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~--~~iA  238 (473)
T 4e3q_A          161 RKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGA--DTIA  238 (473)
T ss_dssp             CEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCG--GGEE
T ss_pred             ceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCC--CceE
Confidence            23443 3444544444433322           123444431      122211       2455566554321  1234


Q ss_pred             EEEEEcCCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccC
Q psy1596         298 FVCGTLGTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWL  365 (375)
Q Consensus       298 ~Vv~t~GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l  365 (375)
                      +|++----...|.+    +=+++|.++|++||+.|++|..+.|+...-.-+.....|+ ..|-+++.  |.+
T Consensus       239 avi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~~--K~l  307 (473)
T 4e3q_A          239 GFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIISS--KNL  307 (473)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEEC--GGG
T ss_pred             EEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHhc--ccc
Confidence            45544333344555    3399999999999999999999998754333223333455 47888875  544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	375
d1js3a_	476	c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa)	1e-40
d1js3a_	476	c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa)	2e-07
d1pmma_	450	c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {	6e-20
d3bc8a1	445	c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase	3e-17
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	4e-16
d1c7ga_	456	c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi	0.001
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	0.003

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 476

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  147 bits (371), Expect = 1e-40
 Identities = 106/173 (61%), Positives = 131/173 (75%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
             Q +ASE+TL+ LLA RT+ +R+ Q + P L    +  +LVAY SDQAHSSVE+AGLIG
Sbjct: 143 VIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIG 202

Query: 263 LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE 322
            VK++ I SD K ++R   L EA+ERDK   LIPFFV  TLGTT  C+FDNL E+GPIC 
Sbjct: 203 GVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH 262

Query: 323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW 375
           +E +WLHVDAAYAGS+FICPEFR  L GVE+A+S  FNP KWL+V+FDC+AMW
Sbjct: 263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 476

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 50.6 bits (120), Expect = 2e-07
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 16/78 (20%)

Query: 2   PVVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELI----THWQSPYMHAYFPALNSYP 57
           P++P   P + +T +              L+   ++I    THW SPY  AYFP  +SYP
Sbjct: 40  PLIPATAPQEPDTFED------------ILQDVEKIIMPGVTHWHSPYFFAYFPTASSYP 87

Query: 58  SLLGDMLSDAINCLGFTW 75
           ++L DML  AI C+GF+W
Sbjct: 88  AMLADMLCGAIGCIGFSW 105

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]} Length = 450

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

 Score = 88.4 bits (218), Expect = 6e-20
 Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 21/181 (11%)

Query: 203 TFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIG 262
           T    +SE+ ++  +A +    ++        E A   +               K     
Sbjct: 119 TNTIGSSEACMLGGMAMKWRWRKRM-------EAAGKPTDKPNLVCGPVQICWHKFARYW 171

Query: 263 LVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC 321
            V++R I      L +   ++IEA + +         V  T G T    ++  + L    
Sbjct: 172 DVELREIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDAL 225

Query: 322 E------KEGLWLHVDAAYAGSSF-ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374
           +         + +H+DAA  G           W   +    SI+ +  K+ +    C  +
Sbjct: 226 DKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWV 285

Query: 375 W 375
            
Sbjct: 286 I 286

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]} Length = 445

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.4 bits (197), Expect = 3e-17
 Identities = 30/192 (15%), Positives = 53/192 (27%), Gaps = 21/192 (10%)

Query: 187 KELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 246
             ++ + G     +          S  +C L  R +  +                     
Sbjct: 101 LNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPK----------------AKYII 144

Query: 247 CSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL 303
                  S  K+ +      V +  +   D+L      +   I+    +H     +  T 
Sbjct: 145 WPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEH--ILCLHSTT 202

Query: 304 GTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSK 363
                   D LEEL  IC    +   V+ AY   S  C    +  A V   ++   +  K
Sbjct: 203 ACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDK 262

Query: 364 WLMVHFDCTAMW 375
             MV      + 
Sbjct: 263 NFMVPVGGAIIA 274

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score = 77.3 bits (189), Expect = 4e-16
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 24/192 (12%)

Query: 187 KELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY 246
           +      G     + I    +   S  +CL A R +                        
Sbjct: 120 ESFFKQLGL--NVHAIATPISTGMSISLCLSAARKKYGSNV-----------------VI 160

Query: 247 CSDQAHSSVEKAGLIGLVKMRYIE---SDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTL 303
               +H S  KA     + MR +E     D++ +  + +  AI+++ +    P  V  TL
Sbjct: 161 YPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPC-VLSTL 219

Query: 304 GTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSK 363
                   D++ E+  ICE   +   ++ AYA  +    E  K  A     +++  +  K
Sbjct: 220 TFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKK-AFKYRVDAVVSSSDK 278

Query: 364 WLMVHFDCTAMW 375
            L+       ++
Sbjct: 279 NLLTPIGGGLVY 290

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

 Score = 38.6 bits (89), Expect = 0.001
 Identities = 13/98 (13%), Positives = 28/98 (28%), Gaps = 8/98 (8%)

Query: 280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAG 336
           +KL   I ++K    I +                  N+  +  +    G+ +  DA    
Sbjct: 161 NKLATLI-KEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCV 219

Query: 337 SSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM 374
            +    + +       Y N    +    +  + D   M
Sbjct: 220 ENAYFIKEQ----EAGYENVSIKDIVHEMFSYADGCTM 253

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score = 36.8 bits (84), Expect = 0.003
 Identities = 25/164 (15%), Positives = 57/164 (34%), Gaps = 17/164 (10%)

Query: 180 DPT-PSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE 238
                 L  +   +F +    ++I        +  I         + KY+Q   + ++  
Sbjct: 74  SRNYYDLKDKAKELFNY----DYIIPAHQGRGAENILFPV-----LLKYKQKEGKAKNPV 124

Query: 239 INSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE---RDKKKHLI 295
             S    + +  AH  +     I +V  +  +S+     +GD  I+ ++          I
Sbjct: 125 FISN-FHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNI 183

Query: 296 PFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAG 336
              V      +         NL+E+  I ++ G+++ +D+A   
Sbjct: 184 VAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFC 227

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	375
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	100.0
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	100.0
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.97
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.93
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.88
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.82
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.77
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.75
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.75
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.7
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.68
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.63
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.58
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.58
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.54
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.49
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.48
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.47
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.46
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.45
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.44
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.43
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.4
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.4
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.39
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.39
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.39
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.38
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.37
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.37
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.36
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.35
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.34
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.28
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.25
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.25
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.25
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.21
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.18
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.15
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.13
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.12
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.11
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.07
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.05
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.04
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	98.95
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	98.94
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	98.93
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	98.88
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	98.88
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	98.86
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	98.82
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	98.77
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	98.76
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	98.75
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	98.72
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	98.71
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	98.71
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	98.66
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	98.65
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	98.63
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	98.58
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	98.58
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	98.57
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	98.53
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	98.53
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	98.52
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	98.42
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	98.39
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	98.36
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	98.33
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	98.3
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	98.19
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	98.16
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	98.06
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	98.06
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	98.04
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	98.02
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	97.94
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	97.85
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	97.72
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	97.67
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	97.46
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	97.19
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	97.16

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=2.4e-62  Score=499.98  Aligned_cols=275  Identities=51%  Similarity=0.912  Sum_probs=252.6

Q ss_pred             CCCCCCCCCCCCcccccccccccchhhhHhhhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhh
Q psy1596           3 VVPKLIPNQGETSKQENDLRNSDVGFYYLRHFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLR   82 (375)
Q Consensus         3 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (375)
                      .+|..+|++|++.++  +  ++++    .+.+.|+++||+||||+||++++.++++++||++++++|+|+++|..+    
T Consensus        41 ~~~~~~P~~g~~~~~--~--l~~~----~~~i~~~~~~~~~P~f~~~~~~~~~~~~~l~~~~~~~~n~n~~~~~~s----  108 (476)
T d1js3a_          41 LIPATAPQEPDTFED--I--LQDV----EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAAS----  108 (476)
T ss_dssp             GSCSSCCSSCCCHHH--H--HHHH----HHTTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGC----
T ss_pred             hcCcccCcCCCCHHH--H--HHHH----HHHHhCCCCCCCCCCeeEeCCCCCCHHHHHHHHHHHhhcccccchhhh----
Confidence            467789999999988  8  8888    889999999999999999999999999999999999999999999988    


Q ss_pred             hhhccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHH
Q psy1596          83 HQNRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKY  162 (375)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~l  162 (375)
                                          |++++||                                                     
T Consensus       109 --------------------p~~t~iE-----------------------------------------------------  115 (476)
T d1js3a_         109 --------------------PACTELE-----------------------------------------------------  115 (476)
T ss_dssp             --------------------HHHHHHH-----------------------------------------------------
T ss_pred             --------------------hhHHHHH-----------------------------------------------------
Confidence                                9999999                                                     


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                       +++++||++++|+|         +.+...   ....++|++|+|||+||++||++||++..++.+....++.+.+..++
T Consensus       116 -~~v~~wl~~l~g~p---------~~~~~~---~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~  182 (476)
T d1js3a_         116 -TVMMDWLGKMLQLP---------EAFLAG---EAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEK  182 (476)
T ss_dssp             -HHHHHHHHHHTTCC---------GGGCCT---TTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred             -HHHHHHHHHHhCCC---------cccccC---CCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCc
Confidence             99999999999999         333221   11457899999999999999999999987776655555555555578


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      +++|+|+++|||+.||+.+.|..++.||+|++|+||+++|+++|++++++|..|++||+|+|||.+|++|||++|++||+
T Consensus       183 ~vv~~s~~~H~Si~ka~~~lGl~~~~v~~d~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDpl~~I~~i~~  262 (476)
T d1js3a_         183 LVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICH  262 (476)
T ss_dssp             EEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred             eEEEecccccHHHHHHHHhcCceEEEeccCCCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeeccHHHHHHHHH
Confidence            89999999999999999988888999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|++||||||||||++++++++++++.|+++||||++|+||||++|++||+++
T Consensus       263 ~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P~~~g~~l  315 (476)
T d1js3a_         263 EEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW  315 (476)
T ss_dssp             HTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             hcCcEEEEecccchhhhhhcchhhhhcCCcccceeeecCccccccCCcceeec
Confidence            99999999999999999999999999999999999999999999999999975

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4e-41  Score=340.31  Aligned_cols=250  Identities=13%  Similarity=0.082  Sum_probs=203.1

Q ss_pred             CCCCCCCCCcccccccccccchhhhHh-hhhcccccCCCCCceeecCCCCChHHHHHHHHHHhhccccccchhhhhhhhh
Q psy1596           6 KLIPNQGETSKQENDLRNSDVGFYYLR-HFAELITHWQSPYMHAYFPALNSYPSLLGDMLSDAINCLGFTWVRTEYLRHQ   84 (375)
Q Consensus         6 ~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (375)
                      ..+|++|.+.++  +  .+.+    .+ .++++..++.   +..|+..  .++..++++++.++|+|.+.|..+      
T Consensus        28 ~~~p~~~~~~~~--~--~~~i----~d~l~~dg~~~~n---~asf~~t--~~~~~~~~l~~~~~~~N~~~~~~~------   88 (450)
T d1pmma_          28 KRFPLHEMRDDV--A--FQII----NDELYLDGNARQN---LATFCQT--WDDENVHKLMDLSINKNWIDKEEY------   88 (450)
T ss_dssp             SSCCCSCCCHHH--H--HHHH----HHHGGGSCCGGGB---CSCCSCC--CCCHHHHHHHHHTTTCBTTCTTTS------
T ss_pred             ccCCccCCCHHH--H--HHHH----HHHhccCCCcccc---ccccccC--CCCHHHHHHHHHHHhcCCCCcccC------
Confidence            468998888766  6  5555    33 3556544443   3333333  344568999999999999999888      


Q ss_pred             hccccCCccchhhhhccccccccccccccccccccccCCCCCchhhhhhHHHHhhhcccccccccCCCchhhcchhHHHH
Q psy1596          85 NRRCNNANVTCDVLIDINAACSTTNSKHHAVEKTTHYKPTSPFQKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSS  164 (375)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~p~~~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~  164 (375)
                                        |++++||                                                      .
T Consensus        89 ------------------P~~~~lE------------------------------------------------------~   96 (450)
T d1pmma_          89 ------------------PQSAAID------------------------------------------------------L   96 (450)
T ss_dssp             ------------------HHHHHHH------------------------------------------------------H
T ss_pred             ------------------ccHHHHH------------------------------------------------------H
Confidence                              9999999                                                      9


Q ss_pred             HHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceE
Q psy1596         165 KVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLV  244 (375)
Q Consensus       165 ~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~v  244 (375)
                      ++++||++|+|+|..+                ...+.|++|+|||+||++|+++||+++..+.+..+.       .....
T Consensus        97 ~~v~~la~L~~~p~~~----------------~~~~~G~~t~GgSeA~~~a~~aar~~~~~~~~~~g~-------~~~~~  153 (450)
T d1pmma_          97 RCVNMVADLWHAPAPK----------------NGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGK-------PTDKP  153 (450)
T ss_dssp             HHHHHHHHHTTCCCCT----------------TSCCSEEEESSHHHHHHHHHHHHHHHHHHHHHHHTC-------CCSCC
T ss_pred             HHHHHHHHHhCCCccc----------------cCCCcCeeeCchHHHHHHHHHHHHHHHHHHhhhcCC-------CCCCc
Confidence            9999999999998311                034679999999999999999999987665433221       12345


Q ss_pred             EEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH--
Q psy1596         245 AYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC--  321 (375)
Q Consensus       245 V~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia--  321 (375)
                      +|++..+|+|+.|++++.|++++.||+++ +|+||+++|+++|+++      +++|++|+|||.+|++||+++|+++|  
T Consensus       154 ~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~~~~~~d~~~L~~~i~~~------t~~Vv~t~gtt~tG~~dpv~~i~~i~~~  227 (450)
T d1pmma_         154 NLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDK  227 (450)
T ss_dssp             EEEESSCCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHH
T ss_pred             eEEecccHHHHHHHHHHcCCCceEeeecCCCCcCcHHHHHHHhhhC------ceEEEeeeeeccCCCccccchhhHHHHH
Confidence            77888999999999999999999999875 6999999999999765      56999999999999999999999886  


Q ss_pred             ----HhcCCEEEEecccccCcc-cchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         322 ----EKEGLWLHVDAAYAGSSF-ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       322 ----~~~~iwlHVDaA~gg~~~-~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                          +++|+||||||||||+.+ +++..+.+..++++|||+++|+||||++|+|||++|
T Consensus       228 ~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~~aDSi~~s~HK~~~~p~g~g~l~  286 (450)
T d1pmma_         228 FQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVI  286 (450)
T ss_dssp             HHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEE
T ss_pred             HHHHhccCcEEEeehhhccceeeeechhhhhhhcccceeEeecChhhccCCCCCeeEEE
Confidence                457999999999998865 566666677899999999999999999999999875

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=4.7e-31  Score=262.69  Aligned_cols=179  Identities=17%  Similarity=0.069  Sum_probs=149.6

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      ..+|.++++|+++++|++                    ....|++|+|||++++.++++++....               
T Consensus        93 ~~le~~~~~~~~~l~g~~--------------------~~~~~~~~~~~t~~~~~~~l~a~~~~~---------------  137 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVH--------------------SVASCFVVPMATGMSLTLCFLTLRHKR---------------  137 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCT--------------------TCCEEEEESSCHHHHHHHHHHHHHHHC---------------
T ss_pred             HHHHHHHHHHHHHHhCCC--------------------cccCccccccchHHHHHHHHHHHHHhC---------------
Confidence            345599999999999998                    557899999999877666555543210               


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEe---cCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIE---SDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp---~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                      .++++|++|..+|+|+.+++.+.|.+++.|+   .+++++||+++|+++|++....+  +++|+++.|++.+|.+||+++
T Consensus       138 ~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~~~~~~~id~~~l~~~i~~~~~~~--~~~v~~~~~~~~~G~~~~~~~  215 (445)
T d3bc8a1         138 PKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEH--ILCLHSTTACFAPRVPDRLEE  215 (445)
T ss_dssp             TTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGG--EEEEEEESSCCTTBCCCCHHH
T ss_pred             CCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeeccCcccccCHHHHHHHHHhccccC--eEEEEEeCCCCCCeeehhHHH
Confidence            1346899999999999999998888777764   47889999999999998865543  678999999999999999999


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|++||+|+|||+|||+++.++........+++.+|++++|+|||+++|+|+|+++
T Consensus       216 i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~vd~~~~s~hK~~~~p~g~~~l~  274 (445)
T d3bc8a1         216 LAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIA  274 (445)
T ss_dssp             HHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEE
T ss_pred             HHHHHHHhCCcEEEEccchhhhhhccccchhccCcCCcceEEecCccccccCCCCceee
Confidence            99999999999999999999887766555544456678999999999999999999874

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.93  E-value=5.1e-25  Score=218.52  Aligned_cols=176  Identities=20%  Similarity=0.164  Sum_probs=140.8

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChH-HHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTAS-ESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT-~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      ...++.+++.|+++++|.+.                      .+.++++|| +++..+|++.|...              
T Consensus       111 ~~~~~~~~~~~~~~~~g~~~----------------------~~~~~~~~t~~~~~~~l~a~r~~~--------------  154 (434)
T d2z67a1         111 MYALTNKILESFFKQLGLNV----------------------HAIATPISTGMSISLCLSAARKKY--------------  154 (434)
T ss_dssp             HHHHHHHHHHHHHHHTTCCC----------------------EEEEESSCHHHHHHHHHHHHHHHH--------------
T ss_pred             HHHHHHHHHHHHHHhcCCCc----------------------ceeecCcHHHHHHHHHHHHHHHhh--------------
Confidence            34566889999999999882                      345555555 55556666554421              


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEe---cCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccH
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIE---SDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNL  314 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp---~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl  314 (375)
                         ++..|++|..+|+|+.|++.+.+.+++.|+   .++.+.+|+++|+++|+++.+.+..+ +|+++.+++..|.+|||
T Consensus       155 ---~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~-~v~~~~~~~~~g~~~~l  230 (434)
T d2z67a1         155 ---GSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRP-CVLSTLTFFPPRNSDDI  230 (434)
T ss_dssp             ---CCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCE-EEEEESSCCTTBCCCCH
T ss_pred             ---cCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCccCCCHHHHHHHHHhhhhcCCce-EEEeccCcCCCccccCH
Confidence               345899999999999999988887766665   46778999999999999987766544 79999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|++||+|+|||+|||++..+++.+.... +...+|++++|+||++++|.|+|+++
T Consensus       231 ~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~-~~~~~D~~~~s~hK~l~~~~g~~~~~  290 (434)
T d2z67a1         231 VEIAKICENYDIPHIINGAYAIQNNYYLEKLKKA-FKYRVDAVVSSSDKNLLTPIGGGLVY  290 (434)
T ss_dssp             HHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHH-HTSCCSEEEEEHHHHHCCCSSCEEEE
T ss_pred             HHHHHHHHHhCCeEEEeccchhhhhhcccccccc-ccCCcceEEEcCccccccCCCccccc
Confidence            9999999999999999999998876665544332 33468999999999999999999874

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.88  E-value=1.6e-22  Score=193.58  Aligned_cols=165  Identities=13%  Similarity=0.108  Sum_probs=138.7

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      +.+.+.+.+++++|.+                       ..++|+|||+||+.++.+..+                   +
T Consensus        48 l~~~~~~~~A~~~g~e-----------------------~~~~t~g~t~a~~~~~~al~~-------------------~   85 (364)
T d2e7ja1          48 IHDFIHNQLPKFLGCD-----------------------VARVTNGAREAKFAVMHSLAK-------------------K   85 (364)
T ss_dssp             HHHHHHTHHHHHTTSS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------T
T ss_pred             HHHHHHHHHHHHhCcC-----------------------EEEEECcHHHHHHHHHHHHhC-------------------C
Confidence            4577889999999986                       368999999999998876532                   3


Q ss_pred             ceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      ++.|++++.+|+|+..++...|.+++.||++  .++.+|+++|+++|++.++.+ .+.+|+.+.+++++|.+.|+++|++
T Consensus        86 gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~-~~~lv~i~~~~n~tG~~~~l~~I~~  164 (364)
T d2e7ja1          86 DAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRG-EVVLALITYPDGNYGNLPDVKKIAK  164 (364)
T ss_dssp             TCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTS-CEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             CcEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccC-CceEEEeecCCCCCceeecchhhee
Confidence            5689999999999999999999999999985  468999999999999876544 3567888999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +|++||+++|+|+||+.+.+.. ..+..  |   +|.+++++||+++.|.++|+++
T Consensus       165 ia~~~~i~livD~a~~~g~~~~-~~~~~--g---~D~~~~S~~K~~~~~g~~g~l~  214 (364)
T d2e7ja1         165 VCSEYDVPLLVNGAYAIGRMPV-SLKEI--G---ADFIVGSGHKSMAASGPIGVMG  214 (364)
T ss_dssp             HHHTTTCCEEEECTTTBTTBCC-CHHHH--T---CSEEEEEHHHHSSCCSSCEEEE
T ss_pred             ccccccchhhccccchhhhhhh-ccccc--c---cceeeeccccccCCCCCEEEEE
Confidence            9999999999999998876532 12221  3   6999999999999998888763

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=2e-19  Score=177.01  Aligned_cols=165  Identities=12%  Similarity=0.016  Sum_probs=135.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      -+++++.+++++|..                    .+...+||+|+|+++...+.......               ..++
T Consensus        68 ~e~~R~~ia~~l~~~--------------------~~~~i~~~~~~T~~~~~~~~~~~~~~---------------~~~g  112 (405)
T d1jf9a_          68 MENVRKRASLFINAR--------------------SAEELVFVRGTTEGINLVANSWGNSN---------------VRAG  112 (405)
T ss_dssp             HHHHHHHHHHHTTCS--------------------CGGGEEEESSHHHHHHHHHHHHHHHH---------------CCTT
T ss_pred             HHHHHHHHHHHcCCC--------------------CcccccccCcHHHHHHHHHhcccccc---------------cCCC
Confidence            367899999999976                    33468999999999877665533221               0235


Q ss_pred             eEEEecCCCchHHHHHHH-H---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKAGL-I---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~-l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ..|++++..|.|+..+++ +   .|.+++.+|++++|.+|++.+++++.+.      +.+|++++.++.+|.+.|+++|+
T Consensus       113 ~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i~~~------t~lv~~~~v~~~tG~~~pi~~i~  186 (405)
T d1jf9a_         113 DNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAEMI  186 (405)
T ss_dssp             CEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHHHH
T ss_pred             CEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCCCcCCHHHHHHhccCC------cEEEEEecCCCcccccCchHHhh
Confidence            689999999999888763 3   4789999999999999999999988765      45899999999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|+++||||+++.+.+... .+.  .+   +|.+++++|||+ .|.|+|++|
T Consensus       187 ~~~~~~g~~~~vD~~q~~g~~~id-~~~--~~---~D~~~~s~hK~~-Gp~G~g~l~  236 (405)
T d1jf9a_         187 TLAHQHGAKVLVDGAQAVMHHPVD-VQA--LD---CDFYVFSGHKLY-GPTGIGILY  236 (405)
T ss_dssp             HHHHHTTCEEEEECTTTTTTSCCC-HHH--HT---CSEEEEEGGGTT-SCSSCEEEE
T ss_pred             hHHHHcCCeeecccceeccccccc-hhh--cC---Cceeeccccccc-cCCCceeee
Confidence            999999999999999999976432 121  23   699999999995 699999986

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=4.9e-18  Score=165.09  Aligned_cols=163  Identities=14%  Similarity=0.147  Sum_probs=133.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++.+++++|.+.                     ...+||+|+|+++..++.+......               .++.
T Consensus        51 ~~~R~~iA~~lg~~~---------------------~~I~~~~~~t~~l~~~~~~~~~~~~---------------~~gd   94 (391)
T d1p3wa_          51 DIARNQIADLVGADP---------------------REIVFTSGATESDNLAIKGAANFYQ---------------KKGK   94 (391)
T ss_dssp             HHHHHHHHHHHTCCG---------------------GGEEEESSHHHHHHHHHHHHHHHHG---------------GGCC
T ss_pred             HHHHHHHHHHcCCCC---------------------CcEEEECCHHHHHHHHHhhhhhhhc---------------CCCC
Confidence            577889999999872                     3589999999998888776554321               1356


Q ss_pred             EEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .|++++..|.|+...++   ..|.+++.||.++++.+|+++++++|+++      +.+|+++..++.||.+.|+++|+++
T Consensus        95 ~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~~~------T~lv~is~~~n~tG~~~~~~~I~~~  168 (391)
T d1p3wa_          95 HIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDD------TILVSIMHVNNEIGVVQDIAAIGEM  168 (391)
T ss_dssp             EEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTT------EEEEECCSBCTTTCCBCCHHHHHHH
T ss_pred             EEEEeccccchHHHHHHHHHHcCCEEEEeCCCCCCeEcHHHHHHhCCCC------cEEEEEECCCCCCeeECCHHHHHHH
Confidence            89999999999887654   35789999999999999999999999765      3488899999999999999999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++|++++||++|+.+..... .    .. ..+|.+++++|||+ .|.++|++|
T Consensus       169 ~~~~~~~~ivD~~~~~g~~~~d-~----~~-~~~D~~~~s~~k~~-g~~g~g~~~  216 (391)
T d1p3wa_         169 CRARGIIYHVDATQSVGKLPID-L----SQ-LKVDLMSFSGHKIY-GPKGIGALY  216 (391)
T ss_dssp             HHHHTCEEEEECTTTBTTBCCC-T----TT-SCCSEEEEESTTTT-SCSSCEEEE
T ss_pred             hccCCcEEEEeeccccCCcccc-c----hh-cccccccccccccc-CCCceEEEE
Confidence            9999999999999998865321 1    11 24799999999995 688988875

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.75  E-value=1.6e-17  Score=163.47  Aligned_cols=166  Identities=11%  Similarity=0.072  Sum_probs=133.9

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      +-+++++.+++++|.+                    .+...+||+++|+++...+.......               ..+
T Consensus        67 ~~e~aR~~ia~llga~--------------------~~~~i~~~~~tt~~~n~~~~~~~~~~---------------~~~  111 (408)
T d1t3ia_          67 AYEAVRNKVAKFINAR--------------------SPREIVYTRNATEAINLVAYSWGMNN---------------LKA  111 (408)
T ss_dssp             HHHHHHHHHHHHTTCS--------------------CGGGEEEESSHHHHHHHHHHHTHHHH---------------CCT
T ss_pred             HHHHHHHHHHHHhCCC--------------------CcccEEeecchHHHHHHHHhhccccc---------------cCC
Confidence            3367899999999997                    33458999999999776655432211               013


Q ss_pred             ceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      +..|++++..|.|+..+++    ..|..++.+|.+.++..+.+.|++++.++      +.+|+.+..++.+|.+.|+++|
T Consensus       112 g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~------t~lv~i~~~~~~tG~~~p~~~i  185 (408)
T d1t3ia_         112 GDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEI  185 (408)
T ss_dssp             TCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHH
T ss_pred             CCEEEeecccchhhhhhhhhhhhccCceEeeeeccccccccHHHhhhccCCC------ceEEEEecccccccccCcHHHH
Confidence            4589999999999887763    35789999999999999999999998665      4489999999999999999999


Q ss_pred             HHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|+++||||+++.+..... .+.  .+   +|.+++++|||+ .|.|+|++|
T Consensus       186 ~~~~~~~g~~~ivDa~q~~g~~~id-~~~--~~---~D~~~~s~hK~~-gp~G~g~l~  236 (408)
T d1t3ia_         186 AQLAHQAGAKVLVDACQSAPHYPLD-VQL--ID---CDWLVASGHKMC-APTGIGFLY  236 (408)
T ss_dssp             HHHHHHTTCEEEEECTTTTTTSCCC-HHH--HT---CSEEEEEGGGTT-SCTTCEEEE
T ss_pred             hhhhhccCceeeeccceeccccccc-ccc--cC---CceEEecccccc-CCCCccccc
Confidence            9999999999999999999976442 121  13   699999999995 699999986

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.75  E-value=3.3e-18  Score=165.33  Aligned_cols=161  Identities=14%  Similarity=0.107  Sum_probs=124.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++.+++++|.+.                     ...+||+|||+++.+++.+.+.                  .++.
T Consensus        53 ~~~r~~la~~~~~~~---------------------~~i~~~~g~t~a~~~~~~~l~~------------------~~g~   93 (381)
T d1elua_          53 AQLRQALAETFNVDP---------------------NTITITDNVTTGCDIVLWGLDW------------------HQGD   93 (381)
T ss_dssp             HHHHHHHHHHTTSCG---------------------GGEEEESSHHHHHHHHHHHSCC------------------CTTC
T ss_pred             HHHHHHHHHHhCCCc---------------------ccEEEECChHHHhhhcchhhhh------------------cCCc
Confidence            678899999999862                     3589999999998887765321                  1345


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcC--HHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLR--GDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md--~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI  317 (375)
                      .|++++..|.|+..+++    ..|..++.||.+++...+  .+.|++++.+      .+.+|+++..++.+|.+.|+++|
T Consensus        94 ~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~------~t~~v~i~~~~n~tG~~~~~~~I  167 (381)
T d1elua_          94 EILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP------KTRLVILSHLLWNTGQVLPLAEI  167 (381)
T ss_dssp             EEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT------TEEEEEEESBCTTTCCBCCHHHH
T ss_pred             eEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhcc------cccccccccccccccccchhhHH
Confidence            78899999999888753    357889999986544333  3444444433      25589999999999999999999


Q ss_pred             HHHHHhc----CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         318 GPICEKE----GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       318 ~~ia~~~----~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      .++|+++    ++++|||++++.+.....     +..+ .+|++++++|||++.|.|+|++|
T Consensus       168 ~~l~~~~~~~~~~~~~vD~~~~~g~~~~~-----~~~~-~~D~~~~s~~K~~~~p~G~g~l~  223 (381)
T d1elua_         168 MAVCRRHQGNYPVRVLVDGAQSAGSLPLD-----FSRL-EVDYYAFTGHKWFAGPAGVGGLY  223 (381)
T ss_dssp             HHHHHHCCSSSCCEEEEECTTTBTTBCCC-----TTTS-CCSEEEEESSSTTCCCTTCEEEE
T ss_pred             HHHHhhccccccccccccccccccccccc-----cccc-ccccccccccccccccchhhHHH
Confidence            9999985    699999999998864321     1111 47999999999999999999885

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.70  E-value=1.1e-16  Score=154.46  Aligned_cols=163  Identities=17%  Similarity=0.176  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++.+++++|.+.                     ...+|++|+|+++..++.......               ..++.
T Consensus        47 ~~aR~~ia~l~~~~~---------------------~~i~~~~~~T~~l~~~~~~~~~~~---------------~~~g~   90 (376)
T d1eg5a_          47 EKAREKVAKVLGVSP---------------------SEIFFTSCATESINWILKTVAETF---------------EKRKR   90 (376)
T ss_dssp             HHHHHHHHHHHTSCG---------------------GGEEEESCHHHHHHHHHHHHHHHT---------------TTTCC
T ss_pred             HHHHHHHHHHcCCCC---------------------CcEEEECCHHHHHHhhhhcccccc---------------cccCc
Confidence            567899999999872                     358999999999877766543211               01345


Q ss_pred             EEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      +++++...|.++....+   -.|.+++.||++++|++|+++++++|+++      +.+|+.+..++.+|.+.|+++|.++
T Consensus        91 ~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~~~------t~lv~is~v~~~tG~~~~~~~i~~~  164 (376)
T d1eg5a_          91 TIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDED------TFLVSIMAANNEVGTIQPVEDVTRI  164 (376)
T ss_dssp             EEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHH
T ss_pred             ccccccccchhhHHHHHHHHhcCCEEEEEcCCCCCeECHHHHHHhcCCC------ceEEEEECCccccceeeeehhhhhh
Confidence            77788888888777654   34789999999999999999999999765      4599999999999999999999999


Q ss_pred             HHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++++  ++.++||++++.+.....     +... .+|.+++++|||+ .|.|+|++|
T Consensus       165 ~~~~~~~~~~~vD~~q~~g~~~~d-----~~~~-~~D~~~~s~~K~~-gp~G~~~l~  214 (376)
T d1eg5a_         165 VKKKNKETLVHVDAVQTIGKIPFS-----LEKL-EVDYASFSAHKFH-GPKGVGITY  214 (376)
T ss_dssp             HHHHCTTCEEEEECTTTTTTSCCC-----CTTT-CCSEEEEEGGGGT-SCTTCEEEE
T ss_pred             hhhcccCceeEEEeeecccccccc-----cccc-Cccceecccceee-cCCCceeEE
Confidence            8665  899999999999876432     1111 4799999999995 799999986

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.68  E-value=4.9e-16  Score=154.46  Aligned_cols=170  Identities=12%  Similarity=0.019  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++||.+                       ..+|+++||.++..|+..+.-                  .++.
T Consensus        69 ~eae~~~A~~~ga~-----------------------~a~f~~~Gtt~~n~a~i~a~~------------------~~gd  107 (462)
T d1c4ka2          69 VAAEKHAARVYNAD-----------------------KTYFVLGGSSNANNTVTSALV------------------SNGD  107 (462)
T ss_dssp             HHHHHHHHHHTTCS-----------------------EEEEESSHHHHHHHHHHHHHC------------------CTTC
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEECCchHHHHHHHHHHhc------------------CCCC
Confidence            67899999999987                       368998888876666544321                  2456


Q ss_pred             EEEecCCCchHHHHHHH-HcCCeEE--EEecCCCC--------CcCHHHHHHHHHH---hhhcCCccEEEEEEcCCCCcc
Q psy1596         244 VAYCSDQAHSSVEKAGL-IGLVKMR--YIESDDKL--------SLRGDKLIEAIER---DKKKHLIPFFVCGTLGTTGAC  309 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~-lg~~~v~--~Vp~d~~g--------~md~e~Le~aI~~---~~~~g~~p~~Vv~t~GtT~tG  309 (375)
                      .|++++.+|.|+..++. +.+..++  .++.|+.|        .++.+.+++.+.+   .......+..++++..+|..|
T Consensus       108 ~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G  187 (462)
T d1c4ka2         108 LVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDG  187 (462)
T ss_dssp             EEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTS
T ss_pred             eEEecccchHHHHHHHHHHhcCCceeeecccccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeecc
Confidence            89999999999999875 4554443  44455554        3455555554432   112233355566666778899


Q ss_pred             ccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhc--CC-----CcccEEEEcCcccCCCCCcceee
Q psy1596         310 AFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLA--GV-----EYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       310 avDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~--gi-----e~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+.|+++|+++|+++|+++|||+||++++.+.+.++....  |.     ..+|++++++||+++.+.+++++
T Consensus       188 ~~~dl~~I~~ia~~~g~~l~vD~A~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~~g~ll  259 (462)
T d1c4ka2         188 TIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQI  259 (462)
T ss_dssp             EEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEE
T ss_pred             chhhHHHHHHHHHHcCCEEEEechhhccccccCcCCcchhhccccccccCCccEEEEecCcccccccceEEE
Confidence            9999999999999999999999999999888776554321  11     24699999999999988887765

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=9.1e-16  Score=148.10  Aligned_cols=162  Identities=10%  Similarity=0.036  Sum_probs=126.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.|++++|.+                    +....+||+|||+++..++.....                   ++.
T Consensus        55 ~ea~~~l~~llg~~--------------------~~~~ii~~gsgT~a~~~~i~~l~~-------------------~~~   95 (388)
T d1h0ca_          55 DEIKEGIQYVFQTR--------------------NPLTLVISGSGHCALEAALVNVLE-------------------PGD   95 (388)
T ss_dssp             HHHHHHHHHHHTCC--------------------CSEEEEESSCHHHHHHHHHHHHCC-------------------SSC
T ss_pred             HHHHHHHHHHhCCC--------------------CCcEEEEcCcHHHHHHHHHHHhhc-------------------cCC
Confidence            78899999999998                    334588999999998887765422                   234


Q ss_pred             EEEecCCCchHHHHHHH--HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL--IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~--lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      .+++....|.+......  ..+..+..++.+..+..|.+.+++.+....     +.+|+++..+|.+|.+.|+++|+++|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~n~tG~i~pi~~i~~~~  170 (388)
T d1h0ca_          96 SFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHK-----PVLLFLTHGESSTGVLQPLDGFGELC  170 (388)
T ss_dssp             CEEECBSSHHHHHHHHHHHHHC--CBCCBCCTTCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHH
T ss_pred             ceeeecccceeeeeccccccccccccccccCCccccchHHHHHHhccCC-----cceEEEeeeeeccccccCHHHHHHHh
Confidence            57777788887755432  344556666777788899999988887643     45889999999999999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      +++|+++|||++++.+.....     +..+ .+|.+++++|||++.|.++|+++
T Consensus       171 ~~~g~~~~vD~~qs~g~~~~d-----~~~~-~~D~~~~s~~K~~~gp~g~~~~~  218 (388)
T d1h0ca_         171 HRYKCLLLVDSVASLGGTPLY-----MDRQ-GIDILYSGSQKALNAPPGTSLIS  218 (388)
T ss_dssp             HTTTCEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCTTCEEEE
T ss_pred             hcccccceecccccccccccc-----cccc-ccceecccccccccCCCceEEEe
Confidence            999999999999998865432     1111 36999999999999999999874

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.58  E-value=1.3e-15  Score=147.59  Aligned_cols=170  Identities=14%  Similarity=0.060  Sum_probs=120.5

Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Q psy1596         160 DKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEI  239 (375)
Q Consensus       160 ~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~  239 (375)
                      .++.+++++.+++++|.+.                     ...+||+++|+++...+..+.......             
T Consensus        69 ~~~~e~~R~~iA~llga~~---------------------~ei~~~~~~T~~~~~~~~~~~~~~~~~-------------  114 (404)
T d1qz9a_          69 RDLSERLGNRLATLIGARD---------------------GEVVVTDTTSINLFKVLSAALRVQATR-------------  114 (404)
T ss_dssp             GGHHHHHHHHHHTTTTCCT---------------------TSEEECSCHHHHHHHHHHHHHHHHHHH-------------
T ss_pred             HHHHHHHHHHHHHHhCCCC---------------------CcEEEecCchHHHHHHhhhhhhhhccc-------------
Confidence            3555789999999999973                     458999999999877666543321111             


Q ss_pred             cCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         240 NSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       240 ~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .+...+++++..|++......-.+.++..++.+.++..+++.++++|.+++      .+|+++..++.+|.+.|+++|++
T Consensus       115 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~T------~lV~i~~v~~~tG~~~pv~~i~~  188 (404)
T d1qz9a_         115 SPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAIDQDT------AVVMLTHVNYKTGYMHDMQALTA  188 (404)
T ss_dssp             STTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCSTTE------EEEEEESBCTTTCBBCCHHHHHH
T ss_pred             CCCcEEEEeccccchHHHHHHhhhheeeeeceeccccccchhHHHhcCCCc------eEEEEecccccccceecHHHHhc
Confidence            122345666677766655542211122222333345667888888887654      48999999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc-ceeeC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD-CTAMW  375 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~-~g~l~  375 (375)
                      +|+++++++|||++++.+..... ...  .   .+|.+++++|||++.|.+ +|++|
T Consensus       189 ~~~~~~~~~~vD~~q~~g~~~~~-~~~--~---~~d~~~~s~~K~~~~~~g~~g~~~  239 (404)
T d1qz9a_         189 LSHECGALAIWDLAHSAGAVPVD-LHQ--A---GADYAIGCTYKYLNGGPGSQAFVW  239 (404)
T ss_dssp             HHHHHTCEEEEECTTTTTTSCCC-HHH--H---TCSEEEECSSSTTCCCTTCCCEEE
T ss_pred             cccccccceeEEeeccccccccc-ccc--c---cceEEEEechhhcccCCceEEEEE
Confidence            99999999999999999976432 111  1   359999999999977655 56653

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.58  E-value=9.2e-15  Score=139.19  Aligned_cols=165  Identities=9%  Similarity=-0.009  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++.+.+++++|.+.                   +..-.+||+|||+++..++.....                  .++.
T Consensus        36 ~~~r~~l~~l~~~~~-------------------~~~~i~~t~s~T~~~~~~~~~l~~------------------~~~~   78 (361)
T d1m32a_          36 EQIRQQLTALATASE-------------------GYTSVLLQGSGSYAVEAVLGSALG------------------PQDK   78 (361)
T ss_dssp             HHHHHHHHHHHCSSS-------------------SEEEEEEESCHHHHHHHHHHHSCC------------------TTCC
T ss_pred             HHHHHHHHHHhCCCC-------------------CCEEEEECCCHHHHHHHHHHHhhh------------------hccc
Confidence            789999999999982                   223378899999998877654321                  0123


Q ss_pred             EEEecCCCchHHHHHH-HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG-LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa-~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      +++++...+.+..... ...+.....+........+.+..+.+.....    .+.+|.++..+|.+|.+.|+++|+++|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~tG~~~~i~~i~~~~~  154 (361)
T d1m32a_          79 VLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAH  154 (361)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHH
T ss_pred             cceeeehhhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhcc----CccceEEEeeecccccchhhhhhhhhhc
Confidence            4555555444443333 3444455555554444444444433332221    2558999999999999999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|++++||++++.+....+ .+    .+ .+|.+++++|||++.|.|.|++|
T Consensus       155 ~~g~~~~vDa~qs~G~~~~d-~~----~~-~~D~~~~s~~K~l~gp~G~g~l~  201 (361)
T d1m32a_         155 RYGKTYIVDAMSSFGGIPMD-IA----AL-HIDYLISSANKCIQGVPGFAFVI  201 (361)
T ss_dssp             HHTCEEEEECTTTTTTSCCC-TT----TT-TCSEEEEESSSTTCCCSSEEEEE
T ss_pred             ccceeeEeecccccCccccc-cc----cc-ccceEEeeecccccCCCCceEEE
Confidence            99999999999999876432 11    11 46999999999999999999885

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.54  E-value=1.2e-14  Score=134.10  Aligned_cols=193  Identities=14%  Similarity=0.148  Sum_probs=131.9

Q ss_pred             hhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHH
Q psy1596         131 IGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASE  210 (375)
Q Consensus       131 ~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~  210 (375)
                      .|++.+.+.+.+......|        +...+.+++.+++++++|.+                      ...+||+|||+
T Consensus        16 ~P~v~~A~~~a~~~~~~~~--------~~~~~~~~l~~~la~~~g~~----------------------~~v~f~~sGt~   65 (345)
T d1v72a1          16 SPEVAQALVKHSSGQAGPY--------GTDELTAQVKRKFCEIFERD----------------------VEVFLVPTGTA   65 (345)
T ss_dssp             CHHHHHHHHHTTSSCCCST--------TCSHHHHHHHHHHHHHHTSC----------------------CEEEEESCHHH
T ss_pred             CHHHHHHHHHHhccCcccc--------CCCHHHHHHHHHHHHHHCCC----------------------cEEEECCchHH
Confidence            4556666666543322333        23345589999999999987                      35789999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH---HHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596         211 STLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG---LIGLVKMRYIESDDKLSLRGDKLIEAIE  287 (375)
Q Consensus       211 Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa---~lg~~~v~~Vp~d~~g~md~e~Le~aI~  287 (375)
                      ||+.++.+++.                   ....+++....|.++....   ...+..+..++.+.++.++++.+++.+.
T Consensus        66 An~~a~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  126 (345)
T d1v72a1          66 ANALCLSAMTP-------------------PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTR  126 (345)
T ss_dssp             HHHHHHHTSCC-------------------TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTT
T ss_pred             HHHHHHHHHHh-------------------cCCccccccccceeeechhhHHHhcCcccccccccccccccHHHhhhhhc
Confidence            99999987653                   2345778889999988864   3467778888888889999999999998


Q ss_pred             HhhhcCCccE--EEEEEcCCCC--ccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhh-hcCCCcccEEEEcCc
Q psy1596         288 RDKKKHLIPF--FVCGTLGTTG--ACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW-LAGVEYANSIAFNPS  362 (375)
Q Consensus       288 ~~~~~g~~p~--~Vv~t~GtT~--tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~-~~gie~aDSi~~d~H  362 (375)
                      +.......+.  ++..+.++..  .+.++++.++.++|++||+++|+|++++++.......... .......+.++..++
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (345)
T d1v72a1         127 EKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGAT  206 (345)
T ss_dssp             SSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCG
T ss_pred             ccccccccccceeeeeeccccccccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCcc
Confidence            7654333333  3333333332  2346889999999999999999999998865432111000 011123577888888


Q ss_pred             ccCCCCCcce
Q psy1596         363 KWLMVHFDCT  372 (375)
Q Consensus       363 K~l~~P~~~g  372 (375)
                      |+++...+.+
T Consensus       207 ~~~~~~~~~~  216 (345)
T d1v72a1         207 KNGVLAAEAI  216 (345)
T ss_dssp             GGTCSSCEEE
T ss_pred             cccccccccc
Confidence            8776655544

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=5.8e-13  Score=130.78  Aligned_cols=191  Identities=9%  Similarity=-0.053  Sum_probs=144.5

Q ss_pred             hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596         128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT  207 (375)
Q Consensus       128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG  207 (375)
                      |++...+.+.+.+-.     ...+.++...|+..+.+++.+.|++++|.+                       ..+++++
T Consensus        62 p~v~~a~~~a~~~~g-----~~~~~sr~~~g~~~~~~~lE~~lA~~~g~e-----------------------~al~~~S  113 (401)
T d1fc4a_          62 PDLIAAAKAGMDSHG-----FGMASVRFICGTQDSHKELEQKLAAFLGME-----------------------DAILYSS  113 (401)
T ss_dssp             HHHHHHHHHHHHHHC-----SCCCSCHHHHCCBHHHHHHHHHHHHHHTCS-----------------------EEEEESC
T ss_pred             HHHHHHHHHHHHHhC-----CCcccceeeccCcHHHHHHHHHHHHhhcCC-----------------------ceEEecc
Confidence            445555555544432     234556777888888899999999999987                       3699999


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596         208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE  287 (375)
Q Consensus       208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~  287 (375)
                      |++||..++.+...                   ++.+|++.+..|.|+..++.+.+.+++.++.     .|.+++++.++
T Consensus       114 G~~An~~~i~~l~~-------------------~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~-----~d~~~le~~~~  169 (401)
T d1fc4a_         114 CFDANGGLFETLLG-------------------AEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMQELEARLK  169 (401)
T ss_dssp             HHHHHHTTHHHHCC-------------------TTCEEEEETTCCHHHHHHHHTSCSEEEEECT-----TCHHHHHHHHH
T ss_pred             hhhhhHHHHHHhcC-------------------CCcEEEeCCcchHHHHccccccCceEEEEcC-----CChHHHHHHHH
Confidence            99999998865432                   3568999999999999999998888888875     48899999888


Q ss_pred             HhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccch--hhhhhhcCCCcccEEEEcCcccC
Q psy1596         288 RDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICP--EFRKWLAGVEYANSIAFNPSKWL  365 (375)
Q Consensus       288 ~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~--~~~~~~~gie~aDSi~~d~HK~l  365 (375)
                      +..+.+....+|++....+..|.+-||++|.++|++||+++++|+||+++.+-..  -......-...+|.++.++.|.+
T Consensus       170 ~~~~~~~~~~liv~egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~  249 (401)
T d1fc4a_         170 EAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKAL  249 (401)
T ss_dssp             HHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTT
T ss_pred             HhhhcccCceEEEEcCCCCCCCchhhhhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeeccccc
Confidence            7766655555666555556779999999999999999999999999999864321  01112222356899999999998


Q ss_pred             CCCCc
Q psy1596         366 MVHFD  370 (375)
Q Consensus       366 ~~P~~  370 (375)
                      +.+.|
T Consensus       250 gg~~G  254 (401)
T d1fc4a_         250 GGASG  254 (401)
T ss_dssp             CSSSC
T ss_pred             ccCCc
Confidence            66554

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=1.6e-13  Score=136.54  Aligned_cols=175  Identities=14%  Similarity=0.131  Sum_probs=121.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       .++++++||+||..|+.+++.+........          ...
T Consensus        77 ~~le~~~a~l~G~~-----------------------~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~----------~~~  123 (467)
T d2v1pa1          77 YALAESVKNIFGYQ-----------------------YTIPTHQGRGAEQIYIPVLIKKREQEKGLD----------RSK  123 (467)
T ss_dssp             HHHHHHHHHHTCCS-----------------------EEEEECSSTTTHHHHHHHHHHHHHHHHCCC----------TTT
T ss_pred             HHHHHHHHHHHCCC-----------------------EEEECCCCHHHHHHHHHHHhhccceEecCC----------CCc
Confidence            67778899999987                       369999999999999999887643321111          122


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC----------CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCc-c---
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD----------KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGA-C---  309 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~----------~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~t-G---  309 (375)
                      .+..+...|.....++.+.|..++.++.+.          .+.+|+++|+++|++..... .+ +|+.....+.. |   
T Consensus       124 ~i~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~-~~-~i~~e~~~~~~gg~~~  201 (467)
T d2v1pa1         124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNN-VP-YIVATITSNSAGGQPV  201 (467)
T ss_dssp             CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGG-CC-CEEEESSBCGGGCBCC
T ss_pred             EEEEecccccccHHHHHHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccc-cc-eeeecceeeccccccC
Confidence            455666777777777788898988887642          46799999999998764432 22 23333222222 3   


Q ss_pred             ccccHHHHHHHHHhcCCEEEEecccccCcccch-----hhhh-----hh-cCCCcccEEEEcCcccCCCCCccee
Q psy1596         310 AFDNLEELGPICEKEGLWLHVDAAYAGSSFICP-----EFRK-----WL-AGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       310 avDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~-----~~~~-----~~-~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      .++++++|.++|++||++||+|+|+.++.....     .+.+     .. .-...+|+++++.||.+++|.|.-+
T Consensus       202 ~~~~l~~i~~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~~~gg~i  276 (467)
T d2v1pa1         202 SLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLL  276 (467)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSCEEE
T ss_pred             CHHHHHHHHHHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCCCCCceeE
Confidence            347899999999999999999999876543211     1100     00 0123589999999999999877543

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.47  E-value=1.3e-13  Score=132.27  Aligned_cols=156  Identities=13%  Similarity=0.045  Sum_probs=123.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ++..+++++++|.+                       ..++|++||.|+..|+.+..-                  .++.
T Consensus        34 ~~~E~~la~~~g~~-----------------------~ai~~~sgt~Al~~al~al~~------------------~~gd   72 (376)
T d1mdoa_          34 QELEAAFCRLTGNQ-----------------------YAVAVSSATAGMHIALMALGI------------------GEGD   72 (376)
T ss_dssp             HHHHHHHHHHHCCS-----------------------EEEEESCHHHHHHHHHHHTTC------------------CTTC
T ss_pred             HHHHHHHHHHHCcC-----------------------eEEEeCCHHHHHHHHHHHhCC------------------CCCC
Confidence            67889999999987                       369999999999999875311                  2456


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCC-CCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDD-KLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~-~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..+|.+...++...|.+++.++++. .+.||++.|+++|.+.+      .+|+++   ...|..-|+++|.++|+
T Consensus        73 eVi~~~~~~~~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~~t------kaIi~~---h~~G~~~~~~~i~~i~~  143 (376)
T d1mdoa_          73 EVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQT------KAIIPV---HYAGAPADLDAIYALGE  143 (376)
T ss_dssp             EEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTE------EEECCB---CGGGCCCCHHHHHHHHH
T ss_pred             EEEEecccccccccchhccccceeeecccccccCCCHHHHHHhcCCCC------eEEEEe---CCCCCccchhHHHHHHH
Confidence            899999999999999998898999999874 58899999999997643      355554   56788899999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++|+++++|+|++.++..-    ....|--....++|.++|++..+- .|++
T Consensus       144 ~~~i~vIeD~a~a~g~~~~----~~~~g~~g~~~~Sf~~~K~l~~g~-GG~i  190 (376)
T d1mdoa_         144 RYGIPVIEDAAHATGTSYK----GRHIGARGTAIFSFHAIKNITCAE-GGIV  190 (376)
T ss_dssp             HHTCCBCEECTTCTTCEET----TEETTSSSEEEEECCTTSSSCSSS-CEEE
T ss_pred             hcCceEEeccchhccCeeC----CeecccccCccccCCCcCCCCCCC-CCEE
Confidence            9999999999999886432    222232234678888999986544 3543

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.46  E-value=1.5e-12  Score=127.00  Aligned_cols=186  Identities=12%  Similarity=0.048  Sum_probs=141.1

Q ss_pred             hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596         128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT  207 (375)
Q Consensus       128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG  207 (375)
                      |.+.....+.+.+-.     ...+.++.+.|+..++.++.+.|++++|.+                       ..++.++
T Consensus        55 p~v~~a~~~a~~~~G-----~~~~~sr~~~g~~~~~~~lE~~LA~~~g~e-----------------------~al~~~S  106 (383)
T d1bs0a_          55 PQIIRAWQQGAEQFG-----IGSGGSGHVSGYSVVHQALEEELAEWLGYS-----------------------RALLFIS  106 (383)
T ss_dssp             HHHHHHHHHHHHHHC-----SCCCSBTTTTCCCHHHHHHHHHHHHHHTCS-----------------------EEEEESC
T ss_pred             HHHHHHHHHHHHHhC-----CCCCccccccCcchHHHHHHHHHHHhcCCC-----------------------ceEEecc
Confidence            345555556665522     133457778888899999999999999987                       3699999


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596         208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE  287 (375)
Q Consensus       208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~  287 (375)
                      |++||+.++.+...                   ++..|++.+..|.|+..++++.+.+++.++.+     |+++|++.+.
T Consensus       107 G~~an~~~i~al~~-------------------~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hn-----d~~~le~~l~  162 (383)
T d1bs0a_         107 GFAANQAVIAAMMA-------------------KEDRIAADRLSHASLLEAASLSPSQLRRFAHN-----DVTHLARLLA  162 (383)
T ss_dssp             HHHHHHHHHHHHCC-------------------TTCEEEEETTCCHHHHHHHHTSSSEEEEECTT-----CHHHHHHHHH
T ss_pred             cchhhHHHHHhhcC-------------------CCceEEeeccccHHHhhccccCCCcceEecch-----HHHHHHHHhc
Confidence            99999998876432                   35689999999999999999988899988864     9999999997


Q ss_pred             HhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCCCcccEEEEcCcccC
Q psy1596         288 RDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGVEYANSIAFNPSKWL  365 (375)
Q Consensus       288 ~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gie~aDSi~~d~HK~l  365 (375)
                      +....   ..+|+.....++.|.+-|+++|.++|++||++++||+||+.+.+- +.-+.  ...++ ..|.+...+-|.+
T Consensus       163 ~~~~~---~~~vv~e~v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~gv~G-~~g~G~~~~~~~-~~~~~~~t~~ka~  237 (383)
T d1bs0a_         163 SPCPG---QQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIG-EQGRGSCWLQKV-KPELLVVTFGKGF  237 (383)
T ss_dssp             SCCSS---CEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSS-GGGCCHHHHTTC-CCSEEEEESSSTT
T ss_pred             ccCCC---ceEEEecCCCCCCCcccchhHHHHHHHhcCcEEEeecceeeeecC-CcccchHHHcCC-ccccccccccccc
Confidence            65432   346777777778999999999999999999999999999998642 11111  11222 3466677777877


Q ss_pred             CCCCc
Q psy1596         366 MVHFD  370 (375)
Q Consensus       366 ~~P~~  370 (375)
                      +.+-+
T Consensus       238 g~~Gg  242 (383)
T d1bs0a_         238 GVSGA  242 (383)
T ss_dssp             SSCCE
T ss_pred             ccccc
Confidence            66543

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.45  E-value=4e-13  Score=134.15  Aligned_cols=174  Identities=11%  Similarity=0.027  Sum_probs=118.1

Q ss_pred             ccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHH
Q psy1596         144 VVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEA  223 (375)
Q Consensus       144 ~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~  223 (375)
                      +..+.|.||+.+        .++.+.+++++|.+                       .+++|++||+||..++.+...  
T Consensus        66 ~GDd~Y~~dpt~--------~~lE~~~a~l~G~e-----------------------~al~~~SGt~An~~a~~~l~~--  112 (456)
T d1c7ga_          66 IGDEAYAGSENF--------YHLEKTVKELFGFK-----------------------HIVPTHQGRGAENLLSQLAIK--  112 (456)
T ss_dssp             SCCCCSSSCHHH--------HHHHHHHHHHHCCS-----------------------EEEEESSHHHHHHHHHHHHCC--
T ss_pred             ccchhccCCchH--------HHHHHHHHHHhCCC-----------------------eEEECCCHHHHHHHHHHHhcC--
Confidence            444667777776        88889999999998                       379999999999998876532  


Q ss_pred             HHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec----------CCCCCcCHHHHHHHHHHhhhcC
Q psy1596         224 IRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES----------DDKLSLRGDKLIEAIERDKKKH  293 (375)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~----------d~~g~md~e~Le~aI~~~~~~g  293 (375)
                                       ++.+|++....+ +..-.....+...+.+..          ...|.+|+++|+++|++.... 
T Consensus       113 -----------------~Gd~Vi~~~~f~-~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~-  173 (456)
T d1c7ga_         113 -----------------PGQYVAGNMYFT-TTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAE-  173 (456)
T ss_dssp             -----------------TTEEEEESSCCH-HHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGG-
T ss_pred             -----------------CCCeEecCcchH-HHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCc-
Confidence                             345666654322 222223445555554433          135789999999999986543 


Q ss_pred             CccEEEEEEcCCCCcc----ccccHHHHHHHHHhcCCEEEEecccccCccc-c----hhhh-----hhhc-CCCcccEEE
Q psy1596         294 LIPFFVCGTLGTTGAC----AFDNLEELGPICEKEGLWLHVDAAYAGSSFI-C----PEFR-----KWLA-GVEYANSIA  358 (375)
Q Consensus       294 ~~p~~Vv~t~GtT~tG----avDpl~eI~~ia~~~~iwlHVDaA~gg~~~~-~----~~~~-----~~~~-gie~aDSi~  358 (375)
                      . +.+++.+..++..|    ..++|++|.++|++||+.+|+|+|+..+... .    +.|.     .... -...+|+++
T Consensus       174 ~-~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s  252 (456)
T d1c7ga_         174 N-IAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCT  252 (456)
T ss_dssp             G-EEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEE
T ss_pred             c-ceeEEeeecccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccccEE
Confidence            1 23555555555555    4478999999999999999999998764321 1    1111     0010 013589999


Q ss_pred             EcCcccCCCCCc
Q psy1596         359 FNPSKWLMVHFD  370 (375)
Q Consensus       359 ~d~HK~l~~P~~  370 (375)
                      +++||.+++|.|
T Consensus       253 ~s~~K~~~~~~G  264 (456)
T d1c7ga_         253 MSGKKDCLVNIG  264 (456)
T ss_dssp             EETTTTTCCSSC
T ss_pred             Eeccccccccce
Confidence            999999998876

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.44  E-value=3.2e-12  Score=125.52  Aligned_cols=188  Identities=15%  Similarity=0.078  Sum_probs=143.8

Q ss_pred             hhhhhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCC
Q psy1596         128 QKVIGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTT  207 (375)
Q Consensus       128 ~~~~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsG  207 (375)
                      +.+.....+.+..-.     ...+.++.+.|+..+++++.+.|++++|.+                       ..++.++
T Consensus        62 p~v~~a~~~al~~yG-----~gs~~Sr~~~G~~~~h~~LE~~lA~~~g~e-----------------------~all~~s  113 (396)
T d2bwna1          62 PVVLAAMHEALEAVG-----AGSGGTRNISGTTAYHRRLEAEIAGLHQKE-----------------------AALVFSS  113 (396)
T ss_dssp             HHHHHHHHHHHHHHC-----SCCCSBTTTBCCBHHHHHHHHHHHHHTTCS-----------------------EEEEESC
T ss_pred             HHHHHHHHHHHHHhC-----CCccccccccCCchHHHHHHHHHHHHhCCC-----------------------ceeeeec
Confidence            345555555555422     234567888999999999999999999988                       3689999


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHH
Q psy1596         208 ASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIE  287 (375)
Q Consensus       208 GT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~  287 (375)
                      |..||+..+.+....                 .++.+|+.++..|.|+..++++.+.+++.++.+     |+++|++.++
T Consensus       114 G~~An~~~i~~l~~~-----------------~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hn-----d~~~l~~l~~  171 (396)
T d2bwna1         114 AYNANDATLSTLRVL-----------------FPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIA  171 (396)
T ss_dssp             HHHHHHHHHHHHHHH-----------------STTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHH
T ss_pred             chHHHHHHHHHHhcc-----------------cCCCceeehhhhhhccchhhhccccCceEeecc-----hHHHhhhHHh
Confidence            999999887654321                 134689999999999999999999999988875     7889998887


Q ss_pred             HhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhh---hhhcCCCcccEEEEcCccc
Q psy1596         288 RDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFR---KWLAGVEYANSIAFNPSKW  364 (375)
Q Consensus       288 ~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~---~~~~gie~aDSi~~d~HK~  364 (375)
                      .....  .+.+||...-.++.|.+-||++|.++|++||++++||.|||.+.+= +.-+   ....-....|.++.++-|.
T Consensus       172 ~~~~~--~~~~iv~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G-~~G~G~~~~~~~~~~~di~~gTlsKa  248 (396)
T d2bwna1         172 ADDPA--APKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYG-PRGAGVAERDGLMHRIDIFNGTLAKA  248 (396)
T ss_dssp             HSCTT--SCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSS-TTSCCHHHHHTCGGGCSEEEEESSST
T ss_pred             hhccc--CceeEEEEeeccCcccccccHhHHHHhhhhcceeeeccceeeeeec-cccccchhhcCCceeeeeeeeccccc
Confidence            65443  3456777777788999999999999999999999999999998642 1111   1111124579999999998


Q ss_pred             CCCC
Q psy1596         365 LMVH  368 (375)
Q Consensus       365 l~~P  368 (375)
                      ++..
T Consensus       249 ~g~~  252 (396)
T d2bwna1         249 YGVF  252 (396)
T ss_dssp             TCSC
T ss_pred             cccc
Confidence            8654

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.43  E-value=1.1e-12  Score=125.20  Aligned_cols=165  Identities=15%  Similarity=0.022  Sum_probs=121.1

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ++-+++++.|++++|.|                    +....+||+|||+++..++.....                   
T Consensus        51 ~i~~~~r~~l~~ll~~~--------------------~~~~i~~~g~gT~~~~~~~~~~~~-------------------   91 (377)
T d1vjoa_          51 ALMDEIQSLLRYVWQTE--------------------NPLTIAVSGTGTAAMEATIANAVE-------------------   91 (377)
T ss_dssp             HHHHHHHHHHHHHHTCC--------------------CSCEEEESSCHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCeEEEEcCcHHHHHHHHHHhccc-------------------
Confidence            34488999999999998                    334578888899998877765322                   


Q ss_pred             CceEEEecCCCchHHHHHH--HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAG--LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa--~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ++..+++....|.+.....  ...+.....+....+...+.+..+.......     +.+|+.+..+|.+|.+.|+++|+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~tg~~~~i~~i~  166 (377)
T d1vjoa_          92 PGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHR-----PAILALVHAETSTGARQPLEGVG  166 (377)
T ss_dssp             TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHH
T ss_pred             cccccceeeechhhhhhhhhhhhhcccccccccCCCCcccchhhhhhhhcCc-----ceeeeeeeeeccceeeechhhhh
Confidence            2335666667777654443  2345555555555555566666666554432     44788889999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|+++|..+|||++++.+....+     ++. -.+|.++++.|||++.|.++|+++
T Consensus       167 ~~~~~~g~~~~vDa~~~~g~~~~~-----~~~-~~~d~~~~s~~K~~~gp~g~~~~~  217 (377)
T d1vjoa_         167 ELCREFGTLLLVDTVTSLGGVPIF-----LDA-WGVDLAYSCSQKGLGCSPGASPFT  217 (377)
T ss_dssp             HHHHHHTCEEEEECTTTTTTSCCC-----TTT-TTCSEEECCSSSTTCSCSSCEEEE
T ss_pred             hhhhhccceEEEecchhhhhhhhc-----ccc-cccceeeecccccccCCCEEEEec
Confidence            999999999999999988765432     111 146999999999999999999864

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.40  E-value=5.2e-12  Score=125.03  Aligned_cols=171  Identities=14%  Similarity=0.098  Sum_probs=113.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.+++++|.+                       .++||++||+||..|+.++++......            ..+.
T Consensus        78 ~~le~~~a~l~g~~-----------------------~~~~~~sGt~A~~~a~~~~~~~g~~~~------------~~~~  122 (465)
T d1ax4a_          78 YDLKDKAKELFNYD-----------------------YIIPAHQGRGAENILFPVLLKYKQKEG------------KAKN  122 (465)
T ss_dssp             HHHHHHHHHHHCCC-----------------------EEEEESSHHHHHHHHHHHHHHHHHHTT------------CCSS
T ss_pred             HHHHHHHHHHHCCC-----------------------EEEECCCcHHHHHHHHHHHHHHHHhcC------------CCCC
Confidence            56778899999987                       379999999999999999987532211            1222


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEec----------CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcc-c--
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIES----------DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGAC-A--  310 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~----------d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tG-a--  310 (375)
                      .++.+...|.+.......++...+.++.          ...|.+|+++|+++|++....  .+.+++.+..++..| .  
T Consensus       123 ~~i~~~~h~~t~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~--~~~~~~~~~~~~~~g~~~~  200 (465)
T d1ax4a_         123 PVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGAD--NIVAIVSTVTCNSAGGQPV  200 (465)
T ss_dssp             CEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGG--GEEEEEEESSBTTTTSBCC
T ss_pred             eEEeccchhhhhHHHHHHcCCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccc--cccceeeccccccCceecC
Confidence            3445555455555555677766665532          246889999999999875442  133344443333332 2  


Q ss_pred             -cccHHHHHHHHHhcCCEEEEecccccCccc----------chhhhhhh-cCCCcccEEEEcCcccCCCCCcc
Q psy1596         311 -FDNLEELGPICEKEGLWLHVDAAYAGSSFI----------CPEFRKWL-AGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       311 -vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~----------~~~~~~~~-~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                       .++|++|.++|++||++||+|+|+.++...          ........ .....+|.++++.||.++.|.+.
T Consensus       201 ~~~~l~~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~~~~~g  273 (465)
T d1ax4a_         201 SMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGG  273 (465)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSCE
T ss_pred             CHHHHHHHHHHHHHcCCEEEEECcchhhhhcccccccccccccchhhhccccccccceeEeecccCcccccce
Confidence             368999999999999999999998654321          00111100 01124799999999998877763

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.40  E-value=2e-12  Score=124.05  Aligned_cols=165  Identities=16%  Similarity=0.041  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ++-+++++.|++++|.+                    +....+||+|||+++-.++.....                   
T Consensus        50 ~i~~~~r~~L~~ll~~~--------------------~~~~i~~~gsgT~a~ea~~~~l~~-------------------   90 (388)
T d2ch1a1          50 RTMDEVKDGLRYIFQTE--------------------NRATMCVSGSAHAGMEAMLSNLLE-------------------   90 (388)
T ss_dssp             HHHHHHHHHHHHHHTCC--------------------CSCEEEESSCHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHHHHhCCC--------------------CCeEEEEcCcHHHHHHHHHHHhcc-------------------
Confidence            34478999999999987                    333466778899998776655432                   


Q ss_pred             CceEEEecCCCchHHHHHH--HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAG--LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa--~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ++..+++....|++.....  ...+...+.++.++....+.+.+++++....     +.+++.+..+|.+|.+.|+++|+
T Consensus        91 ~~~~vl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~t~tG~~~~~~~i~  165 (388)
T d2ch1a1          91 EGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQ-----PKCLFLTHGDSSSGLLQPLEGVG  165 (388)
T ss_dssp             TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHH
T ss_pred             ccccccccccccccccchhhhhhhcccccccccccccccchhhhhhhhccCC-----cceeeeeecccccccccchhhhc
Confidence            2335666777777765553  2345567777777777788888888765432     45888999999999999999999


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|++++..++||++++.+.....     +..+ .+|.++++.|||++.|.|+|+++
T Consensus       166 ~~~~~~~~~~~vD~~ss~g~~pid-----~~~~-~~d~~~~s~~K~~~gp~G~g~~~  216 (388)
T d2ch1a1         166 QICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITPIS  216 (388)
T ss_dssp             HHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEEEE
T ss_pred             chhccccceeeeeeeecccccccc-----hhcc-CceEEEEccccccCCCCeEEEEe
Confidence            999999999999999998875432     1111 46999999999999999999874

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.39  E-value=2.7e-12  Score=124.58  Aligned_cols=173  Identities=9%  Similarity=0.060  Sum_probs=126.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+..|++.                   .+...++|+|+++++..++.+..+               
T Consensus        67 ~G~~~lR~aia~~~~~~~g~~~-------------------~~~~i~it~G~~~al~~~~~~~~~---------------  112 (388)
T d1j32a_          67 AGEPRLREAIAQKLQRDNGLCY-------------------GADNILVTNGGKQSIFNLMLAMIE---------------  112 (388)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHHHHHhcccCC-------------------CCceEEEcCCHHHHHHHHHHHHhC---------------
Confidence            4666777889999999999874                   345689999999998887765422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++.+.++..+...+...+.+++.++.+  +++.+|+++|++++++.      +.+++.+.++|+||.+   
T Consensus       113 ----~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~~P~NPTG~~~~~  182 (388)
T d1j32a_         113 ----PGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVYTP  182 (388)
T ss_dssp             ----TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCCCC------CeEEEECCCCCCCCcccch
Confidence                35679999999999999888877888888874  45789999999988643      3467788899999987   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCC---cccEEEEcCcccCCCC-Cccee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE---YANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie---~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                      +.+++|+++|+++|+++++|.+|+....-.+.+.......+   .-..+..++.|.++.| .=+|.
T Consensus       183 ~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~  248 (388)
T d1j32a_         183 DEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGF  248 (388)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEE
T ss_pred             hhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhcchhHeEE
Confidence            66888899999999999999999765432111111100000   0134677899987655 33444

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.39  E-value=1.7e-12  Score=124.60  Aligned_cols=168  Identities=9%  Similarity=-0.087  Sum_probs=123.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+.++++++....       .          +....+||+|||+++-.++.......                .++.
T Consensus        39 ~~~~~~~r~~~~~~~~-------~----------~~~~i~~t~sgT~a~~~~~~~l~~~~----------------~~gd   85 (382)
T d2bkwa1          39 QRVLKNTRAVFKSAAA-------S----------KSQPFVLAGSGTLGWDIFASNFILSK----------------APNK   85 (382)
T ss_dssp             HHHHHHHHHHTTCCGG-------G----------TCEEEEEESCTTHHHHHHHHHHSCTT----------------CSCC
T ss_pred             HHHHHHHHHHHhhhcC-------C----------CCeEEEEeCcHHHHHHHHHHHHHHhc----------------CCCC
Confidence            6778888899886310       0          33458999999999888776542110                1345


Q ss_pred             EEEecCCCchHHHHHH--HHcCCeEEEEec-CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAG--LIGLVKMRYIES-DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI  320 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa--~lg~~~v~~Vp~-d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i  320 (375)
                      .+++....|++..-..  ...+..+..+.. +.....+.+.+++++.+..     +.+++++..+|.+|...|+++++++
T Consensus        86 ~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~tg~~~~~~~~~~~  160 (382)
T d2bkwa1          86 NVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNS-----YGAVTVTHVDTSTAVLSDLKAISQA  160 (382)
T ss_dssp             EEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSC-----CSEEEEESEETTTTEECCHHHHHHH
T ss_pred             ceEEEEechhhhhhhhhccccccccccccccCCCCccchhHHHHHhhhcc-----chheeeeeccccccccccchhhhhh
Confidence            6778888888765443  344556665554 3445678888888887542     4488999999999999999999999


Q ss_pred             HHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         321 CEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       321 a~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      |+++  ++++|||++++.+.....- .  -.   .+|.+++++|||++.|.|+|++|
T Consensus       161 ~~~~~~~~~~~vDa~qs~g~~pid~-~--~~---giD~~~~s~~K~l~gP~G~g~l~  211 (382)
T d2bkwa1         161 IKQTSPETFFVVDAVCSIGCEEFEF-D--EW---GVDFALTASQKAIGAPAGLSISL  211 (382)
T ss_dssp             HHHHCTTSEEEEECTTTTTTSCCCT-T--TT---TCSEEEEESSSTTCCCSCEEEEE
T ss_pred             ccccccceeeeeecccccccccccc-c--cc---CeeEEeecccccCcCCCchhhhh
Confidence            9877  4999999999998764421 1  11   36999999999999999999975

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.39  E-value=1.7e-12  Score=127.64  Aligned_cols=146  Identities=12%  Similarity=0.104  Sum_probs=117.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+.+|....                 .++...++|+|+++++..++.+..+               
T Consensus        83 ~G~~~LR~aiA~~l~~~~~~~~~-----------------~~~e~Ivit~G~~~al~~~~~~l~~---------------  130 (428)
T d1iaya_          83 HGLPEFRKAIAKFMEKTRGGRVR-----------------FDPERVVMAGGATGANETIIFCLAD---------------  130 (428)
T ss_dssp             TCCHHHHHHHHHHHHHHTTTCSC-----------------CCTTSCEEEEHHHHHHHHHHHHHCC---------------
T ss_pred             cchHHHHHHHHHHHHHHhCCCCC-----------------CChhhEEEcCCHHHHHHHHHHHhCC---------------
Confidence            45566778889999999886421                 0345689999999998887765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                          ++..|+++..+|.++...+. .+|.+++.|+++  +++.+|+++++++++...+.+..+.+|+.+.++++||.+  
T Consensus       131 ----~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s  206 (428)
T d1iaya_         131 ----PGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLD  206 (428)
T ss_dssp             ----TTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCC
T ss_pred             ----CCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCCCceEEEEccCCCccccccc
Confidence                34578899999999998876 467899999885  567899999999988776667677788899999999987  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                       +.+++|+++|++||+||++|.+|+...
T Consensus       207 ~~~~~~i~~~a~~~~~~vI~De~Y~~~~  234 (428)
T d1iaya_         207 KDTLKSVLSFTNQHNIHLVCDEIYAATV  234 (428)
T ss_dssp             HHHHHHHHHHHHTTTCEEEEECTTGGGC
T ss_pred             ccccchhheeeccCcEEEEecccccccc
Confidence             558899999999999999999998653

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.38  E-value=3.6e-12  Score=122.72  Aligned_cols=174  Identities=16%  Similarity=0.068  Sum_probs=126.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+..+....                  .....++|+|+++++..++.+..+               
T Consensus        62 ~G~~~lr~aia~~~~~~~~~~~~------------------~~~~i~~t~G~~~~l~~~~~~l~~---------------  108 (388)
T d1gdea_          62 IGLLELREAIAEKLKKQNGIEAD------------------PKTEIMVLLGANQAFLMGLSAFLK---------------  108 (388)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCCC------------------TTTSEEEESSTTHHHHHHHTTTCC---------------
T ss_pred             cCCHHHHHHHHHHHHhhccccCC------------------ChheeeeccCcchHHHHHHHHhcC---------------
Confidence            35677778888899887776421                  335689999999998887765322               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++...+|..+..++...|.+++.+|.+  +++.+|+++|++++++.      +.+++.+.++|+||.+   
T Consensus       109 ----~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~P~NPtG~~~s~  178 (388)
T d1gdea_         109 ----DGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGAVLTK  178 (388)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHHHHhCccC------CeEEEECCCcCCCCCcCCH
Confidence                34578899999999999998888899999985  46789999999988543      4477788899999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhh--hcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKW--LAGVEYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~--~~gie~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                      +.+++|+++|++|++++++|.+|+......+.....  +.+...-.-+.-++.|.++.| +-+|.
T Consensus       179 ~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~  243 (388)
T d1gdea_         179 KDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGF  243 (388)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCccccEEE
Confidence            678999999999999999999998753321111110  111111124567899987655 44554

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.37  E-value=8.8e-13  Score=121.78  Aligned_cols=166  Identities=14%  Similarity=0.134  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++.+++++++|.+                       .+++++|||+||+.|+.+++.                   ++.
T Consensus        37 ~~le~~lA~~~G~~-----------------------~~~~~~sGt~A~~~al~a~~~-------------------~g~   74 (343)
T d1m6sa_          37 NELERLAAETFGKE-----------------------AALFVPSGTMGNQVSIMAHTQ-------------------RGD   74 (343)
T ss_dssp             HHHHHHHHHHTTCS-----------------------EEEEESCHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHHCCC-----------------------eEEEeCCHHHHHHHHHHHHhc-------------------cCC
Confidence            78889999999987                       379999999999999887654                   234


Q ss_pred             EEEecCCCchHHHHHH---HHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC-ccc---cccHHH
Q psy1596         244 VAYCSDQAHSSVEKAG---LIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG-ACA---FDNLEE  316 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa---~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~-tGa---vDpl~e  316 (375)
                      .+++....|++.....   ......++.++. +.+..|++.+++.|.....+...+..++.+...+. .|.   ++++.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  153 (343)
T d1m6sa_          75 EVILEADSHIFWYEVGAMAVLSGVMPHPVPG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKE  153 (343)
T ss_dssp             EEEEETTCHHHHSSTTHHHHHTCCEEEEECE-ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred             ceeccccccceeeecccccccccceeecccc-ccCccCHHHHHHhhhhhhcccccccccccccccccCCceecCHHHHHH
Confidence            6778888888877653   244556666665 45778999999999887766555555555554444 444   467778


Q ss_pred             HHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      |+++|+++++++|+|++++++......... .......+.++++.+|.++...+.++
T Consensus       154 i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~  209 (343)
T d1m6sa_         154 ICTIAKEHGINVHIDGARIFNASIASGVPV-KEYAGYADSVMFCLSKGLCAPVGSVV  209 (343)
T ss_dssp             HHHHHHHHTCEEEEEETTHHHHHHHHCCCH-HHHHHTCSEEEEESSSTTCCSSCEEE
T ss_pred             HHHHHHhcCeEEEeccccccccccccccch-hhhccccccccccccccccccccccc
Confidence            888999999999999999886432111000 01112357888888888877765543

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.37  E-value=2.4e-12  Score=126.57  Aligned_cols=146  Identities=15%  Similarity=0.148  Sum_probs=119.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+.+|.+..                 .++...++|+|+|+++..++.+..+               
T Consensus        84 ~G~~~LR~aiA~~l~~~~~~~~~-----------------~~pe~I~it~G~~~al~~~~~~l~~---------------  131 (431)
T d1m7ya_          84 HGLPAFKKAMVDFMAEIRGNKVT-----------------FDPNHLVLTAGATSANETFIFCLAD---------------  131 (431)
T ss_dssp             TCCHHHHHHHHHHHHHHTTTSSC-----------------CCGGGEEEEEHHHHHHHHHHHHHCC---------------
T ss_pred             cCcHHHHHHHHHHHHHHhCCCCC-----------------CCcceEEECCCHHHHHHHHHHHhcC---------------
Confidence            46667778899999999885420                 0345789999999998888776432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHH-HcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGL-IGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~-lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                          ++..|+++...+..+...+. .++.+++.|+.+  +++.+|++++++++++..+.+..+.+++.+.++++||.+  
T Consensus       132 ----pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s  207 (431)
T d1m7ya_         132 ----PGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMT  207 (431)
T ss_dssp             ----TTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCC
T ss_pred             ----CCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCcceEEEecCcccccccccc
Confidence                34578899999988888876 467888999875  357899999999999888778778889999999999987  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                       +.+++|+++|+++++++++|.+|+...
T Consensus       208 ~~~l~~i~~~a~~~~~~vI~De~Y~~~~  235 (431)
T d1m7ya_         208 RNELYLLLSFVEDKGIHLISDEIYSGTA  235 (431)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTGGGC
T ss_pred             ccccccccccccccCcceeecccccccc
Confidence             668899999999999999999998754

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.36  E-value=6e-12  Score=121.44  Aligned_cols=172  Identities=10%  Similarity=0.006  Sum_probs=126.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+..|.+.                   ++...++|+|+++++..++.+..+               
T Consensus        68 ~G~~~lR~~ia~~~~~~~~~~~-------------------~~~~i~it~G~~~al~~~~~~l~~---------------  113 (382)
T d1b5pa_          68 AGIPELREALAEKFRRENGLSV-------------------TPEETIVTVGGSQALFNLFQAILD---------------  113 (382)
T ss_dssp             TCCHHHHHHHHHHHHHTTCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHhhhhhhccccc-------------------ccccceecCCHHHHHHHHHHHhCC---------------
Confidence            4667788899999999888874                   345689999999998777765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++...++..+...+...|.+++.||.+  +++.+|+++|++++.+.      +.+++.+.++|+||.+   
T Consensus       114 ----~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~P~NPTG~~~s~  183 (382)
T d1b5pa_         114 ----PGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYPK  183 (382)
T ss_dssp             ----TTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCCCC------CeEEEECCCCCCcchhCCH
Confidence                34578999999999988888888999999875  45789999999887543      3467778899999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                      +.+++|+++|++||+|+++|.+|+....-.+.... ......--.+..++.|.++.| .-+|.
T Consensus       184 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~i~~~s~SK~~~~~GlR~G~  245 (382)
T d1b5pa_         184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP-GRVAPEHTLTVNGAAKAFAMTGWRIGY  245 (382)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCG-GGTCTTTEEEEEESTTTTTCGGGCCEE
T ss_pred             HHHHHHHHHHHHcCeEEEEEccccceecCCCCCCH-HHcCCCCEEEEecchhhccCcHhheEE
Confidence            67889999999999999999999865431111110 111111124456889988766 44554

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.35  E-value=1.1e-12  Score=126.78  Aligned_cols=156  Identities=16%  Similarity=0.159  Sum_probs=110.1

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      +.++.+...+.++..                    .....++|+||++|++.++.+...                   ++
T Consensus        52 ~~~l~~~~~~~~~~~--------------------~~e~~~~~~~~~~a~~~~l~al~~-------------------~~   92 (366)
T d2aeua1          52 AEKVNEYGLKHLGGD--------------------ENDKCVGFNRTSSAILATILALKP-------------------KK   92 (366)
T ss_dssp             HHHHHHHHHHHHTCC--------------------TTEEEEEESSHHHHHHHHHHHHCC-------------------SE
T ss_pred             HHHHHHHHHHHccCC--------------------CccEEEEeCCHHHHHHHHHHHhCC-------------------CC
Confidence            355556666666655                    334688999999999988865321                   23


Q ss_pred             eEEEec-CCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCC-ccccccHHHHHHH
Q psy1596         243 LVAYCS-DQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTG-ACAFDNLEELGPI  320 (375)
Q Consensus       243 ~vV~~S-~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~-tGavDpl~eI~~i  320 (375)
                      .+++++ ..+|.|+..++++.+.++  ++.+     |+++|+++|++.+      .+|+.+.++++ ++.+++|++|+++
T Consensus        93 ~vi~~~~~~~~~~~~~~~~l~g~~~--v~~~-----d~e~l~~~i~~~t------k~i~~~~p~n~~~~~~~~l~~i~~i  159 (366)
T d2aeua1          93 VIHYLPELPGHPSIERSCKIVNAKY--FESD-----KVGEILNKIDKDT------LVIITGSTMDLKVIELENFKKVINT  159 (366)
T ss_dssp             EEEECSSSSCCTHHHHHHHHTTCEE--EEES-----CHHHHHTTCCTTE------EEEEECBCTTSCBCCHHHHHHHHHH
T ss_pred             EEEEecCCCcchhHHHHHHhcCCeE--ECCC-----CHHHHHHhcCCCc------eEEEEEecCCCCcCCHHHHHHHHHH
Confidence            355555 579999999999888764  4443     7899999887654      36777777664 5678999999999


Q ss_pred             HHhcCCEEEEecccccCcccchh-hhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPE-FRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~-~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      |++||+|+++|+||+........ ......|   +|.++.+.||.+..+ ..|.+
T Consensus       160 a~~~~~~~i~De~y~~~~~~~~~~~~~~~~~---~di~~~S~sK~~~g~-~~G~i  210 (366)
T d2aeua1         160 AKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKLMEGP-RGGLL  210 (366)
T ss_dssp             HHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSSSSSC-SCEEE
T ss_pred             hccCcEEEEEecCccccccccccCCCHhhcC---ceEEEeccccccccc-ceeEE
Confidence            99999999999999865321100 0011123   699999999987654 55654

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=9.6e-12  Score=118.66  Aligned_cols=135  Identities=11%  Similarity=0.033  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ++++.+.+|+++.+|++.                   ++...++|+|+++++..++.+..+                   
T Consensus        39 ~lr~~ia~~~~~~~g~~~-------------------~~~~i~it~G~~~~l~~~~~~l~~-------------------   80 (361)
T d1d2fa_          39 EFLAAIAHWFSTQHYTAI-------------------DSQTVVYGPSVIYMVSELIRQWSE-------------------   80 (361)
T ss_dssp             HHHHHHHHHHHHHSCCCC-------------------CGGGEEEESCHHHHHHHHHHHSSC-------------------
T ss_pred             HHHHHHHHHHHHHhCCCC-------------------CcceEEEeCCHHHHHHHHhhhccc-------------------
Confidence            466889999999999984                   345789999999998776654321                   


Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEecC---CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD---DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNL  314 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d---~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl  314 (375)
                      ++..|++.+..|..+...+...+.+++.++.+   +++.+|++.+++.+.+.     .+.+|+.+.++|+||.+   +.+
T Consensus        81 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~-----~~~~i~l~~p~NPTG~~~s~~~~  155 (361)
T d1d2fa_          81 TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKVWTCDEL  155 (361)
T ss_dssp             TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCCCCTTHH
T ss_pred             cccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccC-----CceeEEecccccccccccchhhh
Confidence            34578899999999988888888888888763   45679999999988543     24477778899999976   568


Q ss_pred             HHHHHHHHhcCCEEEEecccccCc
Q psy1596         315 EELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       315 ~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      ++|+++|+++|+++++|.+|....
T Consensus       156 ~~i~~~~~~~~~~lI~De~y~~~~  179 (361)
T d1d2fa_         156 EIMADLCERHGVRVISDEIHMDMV  179 (361)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTCB
T ss_pred             hhhhhhhhhhheeeeecccccccc
Confidence            899999999999999999998753

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.28  E-value=1.1e-11  Score=112.08  Aligned_cols=193  Identities=16%  Similarity=0.159  Sum_probs=125.1

Q ss_pred             hhhHHHHhhhcccccccccCCCchhhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHH
Q psy1596         131 IGKLSSKIKSHNVVVTEADKGNSIVILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASE  210 (375)
Q Consensus       131 ~~~~~~~~~~~n~~~~~~~~gd~~~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~  210 (375)
                      .|++.+.+.+.|......|..        ..+.+++++.+++++|.+.                     ..++||+||||
T Consensus        13 ~P~v~eAl~~~~~~~~~~y~~--------~~~~~~lr~~ia~~~g~~~---------------------~~v~~tsggte   63 (340)
T d1svva_          13 HPKILDLMARDNMTQHAGYGQ--------DSHCAKAARLIGELLERPD---------------------ADVHFISGGTQ   63 (340)
T ss_dssp             CHHHHHHHHHHTTCCCCSTTC--------SHHHHHHHHHHHHHHTCTT---------------------SEEEEESCHHH
T ss_pred             CHHHHHHHHHHhhcCCCCCCC--------CHHHHHHHHHHHHHhCCCc---------------------ceEEEcCCHHH
Confidence            456777777766554444433        3344789999999999872                     46899999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHH--cCCeEEEEecCCCCCcCHHHHHHHHHH
Q psy1596         211 STLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLI--GLVKMRYIESDDKLSLRGDKLIEAIER  288 (375)
Q Consensus       211 Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~l--g~~~v~~Vp~d~~g~md~e~Le~aI~~  288 (375)
                      ||++++...+.                   ++..++.....|.++......  .+.....+.. ..+..+.+...++...
T Consensus        64 an~~a~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  123 (340)
T d1svva_          64 TNLIACSLALR-------------------PWEAVIATQLGHISTHETGAIEATGHKVVTAPC-PDGKLRVADIESALHE  123 (340)
T ss_dssp             HHHHHHHHHCC-------------------TTEEEEEETTSHHHHSSTTHHHHTTCCEEEECC-TTSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhh-------------------hccccccccccceeeeecccccccceeeeeccc-ccccccchhHHHHhhh
Confidence            99998876543                   234677888899888776432  3333333333 3445666666666666


Q ss_pred             hhhcCCccEEEEEEcCCCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhh-cCCCcccEEEEcCccc
Q psy1596         289 DKKKHLIPFFVCGTLGTTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWL-AGVEYANSIAFNPSKW  364 (375)
Q Consensus       289 ~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~-~gie~aDSi~~d~HK~  364 (375)
                      .......+..++.....++.|.+   |++.++.++|++++.++|+|+++++............ ......+...+.+.|.
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (340)
T d1svva_         124 NRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKA  203 (340)
T ss_dssp             SCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTT
T ss_pred             hhcccCCcceeeeecccccccccccHHHhhhhhcccccccceeeeeccceeeeecccccccccccccccceeeecCCccc
Confidence            55544445555555555666655   6777888999999999999999987654322110000 0001247788888888


Q ss_pred             CCCCCcce
Q psy1596         365 LMVHFDCT  372 (375)
Q Consensus       365 l~~P~~~g  372 (375)
                      ++.+....
T Consensus       204 ~~~~~~~~  211 (340)
T d1svva_         204 GGMFGEAL  211 (340)
T ss_dssp             TCSSCEEE
T ss_pred             cccccccc
Confidence            77665443

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.25  E-value=7.4e-11  Score=114.03  Aligned_cols=178  Identities=13%  Similarity=-0.030  Sum_probs=124.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+.+|.+.                   ++...++|+|+++++..++.+..+               
T Consensus        71 ~G~~~lR~aia~~l~~~~g~~~-------------------~~~~I~it~G~~~al~~~~~~l~~---------------  116 (403)
T d1wsta1          71 KGFTPLRLALARWMEKRYDIPM-------------------SKVEIMTVAGSQQALDLIGRVFLN---------------  116 (403)
T ss_dssp             SCCHHHHHHHHHHHHHHHCCCC-------------------TTCEEEEESSHHHHHHHHHHHHCC---------------
T ss_pred             cCCHHHHHHHHHHHHHHhCCCC-------------------ChHHeeecccchHHHHHHHHHHhh---------------
Confidence            4677788999999999999874                   446789999999999887765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhc-CCccEEEEEEcCCCCcccc---c
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKK-HLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~-g~~p~~Vv~t~GtT~tGav---D  312 (375)
                          ++..|++.+.++..+...+...+.+++.||.++++ .+...+.........+ .....+++.+.++++||.+   +
T Consensus       117 ----~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~  191 (403)
T d1wsta1         117 ----PGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKG-MRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVD  191 (403)
T ss_dssp             ----TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHH
T ss_pred             ----cCCccccCCCcchhhhHHHhhccccceeEeecccC-CccccccccchhhhhccccccccccccccCCCCCccCCHH
Confidence                34578899999999999999888999999987654 3444454444333322 2334566677788999977   6


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhh--hhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFR--KWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~--~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      .+++|+++|++||++|++|.+|+....-.....  ...... .--.+.-+++|+++.-.-+|.+
T Consensus       192 ~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~G~RiG~~  254 (403)
T d1wsta1         192 RRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDY-GRVIYLGTFSKILAPGFRIGWV  254 (403)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSS-SCEEEEEESTTTTCGGGCCEEE
T ss_pred             HHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCC-CcEEEEccccceecCccccccc
Confidence            788899999999999999999976432111000  001111 1235677999988644555543

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.25  E-value=3.1e-11  Score=117.19  Aligned_cols=165  Identities=10%  Similarity=-0.023  Sum_probs=123.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+..|++.                   +....++|+|+++++..++.+..+               
T Consensus        70 ~G~~~LR~aia~~~~~~~g~~~-------------------~~~~i~i~~G~~~~~~~~~~~~~~---------------  115 (395)
T d1xi9a_          70 EGLPELRKAIVEREKRKNGVDI-------------------TPDDVRVTAAVTEALQLIFGALLD---------------  115 (395)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHhhhhcccccc-------------------cccccccccccchhhhhhhhhhcC---------------
Confidence            4667788899999999999884                   345688899999988776655422               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++.+.++..+...++..|.+++.+|.  ++++.+|.+++++++.+.      +.+|+.+.++|+||.+   
T Consensus       116 ----~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~------~~~v~l~~P~NPTG~~~s~  185 (395)
T d1xi9a_         116 ----PGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALYDK  185 (395)
T ss_dssp             ----TTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHHHHHhhccc------ccEEEecCCCCCccchhhH
Confidence                3457889999999999998888889888886  356789999999987543      3477788899999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchh--hhhhhcCCCccc-EEEEcCcccCCCC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPE--FRKWLAGVEYAN-SIAFNPSKWLMVH  368 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~--~~~~~~gie~aD-Si~~d~HK~l~~P  368 (375)
                      +.+++|+++|++|++|++.|.+|.....-.+.  ......   ... -+..++.|.++.|
T Consensus       186 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~---~~~vi~~~S~SK~~~~~  242 (395)
T d1xi9a_         186 KTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTK---DVPVIVMNGLSKVYFAT  242 (395)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCS---SSCEEEEEESTTTTCCG
T ss_pred             HHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCC---CCCEEEEeCcchhcccc
Confidence            66889999999999999999999774321110  111111   112 2445799987765

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.25  E-value=2e-11  Score=116.73  Aligned_cols=129  Identities=13%  Similarity=0.097  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++.+++.++++.                     ...++|+|+++++..++.+...                   ++.
T Consensus        64 ~elr~aiA~~~~~~~---------------------~~Iiit~G~~~al~~~~~~l~~-------------------~~d  103 (368)
T d1v2da_          64 PALREALAEEFAVEP---------------------ESVVVTSGATEALYVLLQSLVG-------------------PGD  103 (368)
T ss_dssp             HHHHHHHHHHHTSCG---------------------GGEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHhhcccCC---------------------cceeeccchHHHHHHHhhcccc-------------------ccc
Confidence            455566677778762                     3589999999999887765422                   245


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC---CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD---DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEEL  317 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d---~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI  317 (375)
                      .|+++...|......+...+.+++.++.+   +.+.+|++.|++++++.      +.+++.+.++++||.+   +.+++|
T Consensus       104 ~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~NPtG~~~~~~~l~~l  177 (368)
T d1v2da_         104 EVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR------TRALLLNTPMNPTGLVFGERELEAI  177 (368)
T ss_dssp             EEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             cccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhccC------ceEEEEcCCCCcccccCCHHHHHHH
Confidence            78889999999999888888888877763   56789999999988654      3367778899999998   458889


Q ss_pred             HHHHHhcCCEEEEecccccCc
Q psy1596         318 GPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       318 ~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +++|++||+++++|++|+...
T Consensus       178 ~~~a~~~~i~ii~D~~~~~~~  198 (368)
T d1v2da_         178 ARLARAHDLFLISDEVYDELY  198 (368)
T ss_dssp             HHHHHHTTCEEEEECTTTTCB
T ss_pred             HHHHHHcCCeeeechhhhhhc
Confidence            999999999999999998654

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.21  E-value=8.7e-11  Score=113.91  Aligned_cols=154  Identities=12%  Similarity=0.074  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ++..+++++++|.+                       ..++|++||.|+.+|+.+.-                  +.++.
T Consensus        37 ~~fE~~~a~~~g~~-----------------------~~v~~~SGt~Al~lal~~l~------------------~~~gd   75 (384)
T d1b9ha_          37 NSFEREFAAHHGAA-----------------------HALAVTNGTHALELALQVMG------------------VGPGT   75 (384)
T ss_dssp             HHHHHHHHHHTTCS-----------------------EEEEESCHHHHHHHHHHHTT------------------CCTTC
T ss_pred             HHHHHHHHHHHCcC-----------------------eEEEeCCHHHHHHHHHHHcC------------------CCCCC
Confidence            67788999999887                       36999999999999987531                  12456


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICE  322 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~  322 (375)
                      .|+++..++.+...++...|.+++.++++ ..+.||++.+++.+...++      +|   ..+...|...++++|.++|+
T Consensus        76 eVi~p~~t~~a~~~ai~~~g~~p~~~d~~~~~~~~d~~~~~~~i~~~tk------~i---~~~~~~g~~~d~~~i~~~~~  146 (384)
T d1b9ha_          76 EVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTK------VI---MPVHMAGLMADMDALAKISA  146 (384)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEE------EE---CCBCGGGCCCCHHHHHHHHH
T ss_pred             EEEEeccccccccccccccccccccccccccccccchhhhccccccccc------cc---ccccccccccccccchhhhh
Confidence            79999999999999998888899999886 4688999999998866533      33   34577889999999999999


Q ss_pred             hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         323 KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       323 ~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +++++++.|+|++.++.+-...   .-....+..+++.++|.+...-|
T Consensus       147 ~~~i~lieD~a~a~ga~~~g~~---~g~~g~~~~~Sf~~~K~i~~g~G  191 (384)
T d1b9ha_         147 DTGVPLLQDAAHAHGARWQGKR---VGELDSIATFSFQNGKLMTAGEG  191 (384)
T ss_dssp             HHTCCBCEECTTCTTCEETTEE---GGGSSSCEEEECCTTSSSCSSSC
T ss_pred             hhhhhhhhhhceecccccCCEe---cCcccccceeccccccccccccc
Confidence            9999999999999887542111   11133467788889998755443

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.18  E-value=1.9e-10  Score=112.01  Aligned_cols=176  Identities=13%  Similarity=0.022  Sum_probs=125.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+..|++.-                  ++...++|+|+++++..++.+..+               
T Consensus        80 ~G~~~LR~aia~~~~~~~g~~~~------------------~~~~I~it~G~~~al~~~~~~~~~---------------  126 (420)
T d1vp4a_          80 EGDPVLKQQILKLLERMYGITGL------------------DEDNLIFTVGSQQALDLIGKLFLD---------------  126 (420)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCCSC------------------CGGGEEEEEHHHHHHHHHHHHHCC---------------
T ss_pred             cCCHHHHHHHHHHHHHHhCCCCC------------------CHHHeEeccchhhhHHHHHHhhhc---------------
Confidence            46677778999999999988620                  345689999999998877765322               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcC---CccEEEEEEcCCCCcccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKH---LIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g---~~p~~Vv~t~GtT~tGav--  311 (375)
                          ++..|++++..+......+...|.+++.+|.++++ +|++.++..+.+.....   .+..+++.+.++++||.+  
T Consensus       127 ----~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s  201 (420)
T d1vp4a_         127 ----DESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTS  201 (420)
T ss_dssp             ----TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCC
T ss_pred             ----cccccccccccccchhHHHHHHhhhcccccccccc-cccchhhhhhhhhHHHhhccccceeeEecCCCCccchhhh
Confidence                34578899999999998888888999999987654 89999999887644332   223345566678999987  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcccc----hhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSFIC----PEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~----~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                       +.+++|+++|+++++|+++|.+|.....-.    +.......   ..-.+..++.|++..-.-+|.
T Consensus       202 ~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~---~~~i~~~s~sk~~~~G~RiG~  265 (420)
T d1vp4a_         202 LEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGP---ERVVLLNTFSKVLAPGLRIGM  265 (420)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCT---TTEEEEEESTTTTCGGGCEEE
T ss_pred             hhhhhhhhhhhhcccccccccchhhhccccCcccccccccccc---cceeEEecccccccccccccc
Confidence             678999999999999999999998653211    11111111   123455667887764344443

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.15  E-value=2.5e-10  Score=110.81  Aligned_cols=144  Identities=12%  Similarity=0.070  Sum_probs=112.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+.++...+             .+..-++...++|+|+++++..++.+..+               
T Consensus        72 ~G~~~LReaia~~~~~~~~~~~~-------------~~~~~~~~~I~it~G~~~al~~~~~~l~~---------------  123 (412)
T d1bw0a_          72 VGSPEAREAVATWWRNSFVHKEE-------------LKSTIVKDNVVLCSGGSHGILMAITAICD---------------  123 (412)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCSTT-------------TGGGCCGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             cCCHHHHHHHHHHHHHhcCcccc-------------cCCCCCCCeEEEecccccchhhhhhhhhc---------------
Confidence            45677888999999998765421             00001345789999999998887765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++++.++..+...+...|.+++.+|++  +++..++++|++++.+.      +.+++.+.++++||.+   
T Consensus       124 ----~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~~~l~np~NPtG~~~~~  193 (412)
T d1bw0a_         124 ----AGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNPCGSNFSR  193 (412)
T ss_dssp             ----TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----cccceeeeeccchhhhhhhhccCccccccccccccccchhhHHHHhhhhcc------ccccccccccccccccchh
Confidence                34578899999999988888889999999985  46789999998876543      3477888899999987   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +.+++|+++|+++++|+++|.+|+...
T Consensus       194 ~~~~~i~~~~~~~~~~vi~De~Y~~~~  220 (412)
T d1bw0a_         194 KHVEDIVRLAEELRLPLFSDEIYAGMV  220 (412)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECTTTTCB
T ss_pred             hhccccccccccCCeeeechhhHHHhc
Confidence            678899999999999999999998753

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.13  E-value=6.6e-11  Score=113.74  Aligned_cols=159  Identities=12%  Similarity=0.010  Sum_probs=123.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ++..+++++++|.+                       ..+++++||.|+.+|+.+.....                .++.
T Consensus        34 ~~fE~~~~~~~g~k-----------------------~ai~~~Sgt~Al~~al~al~~~~----------------~~~~   74 (371)
T d2fnua1          34 LLFEEALCEFLGVK-----------------------HALVFNSATSALLTLYRNFSEFS----------------ADRN   74 (371)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHSSCCC----------------TTSC
T ss_pred             HHHHHHHHHHHCcC-----------------------eEEEEecHHHHHHHHHHHhcccC----------------CCCC
Confidence            77888999999987                       36999999999999987643210                1234


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..++.+...++...|.+++.+.+|++..++.+++++++.+.      +.+|+++   ...|..-++++|.++|++
T Consensus        75 eVi~p~~t~~a~~~ai~~~G~~pv~vDi~~~~~~~~~~~~~~~~~~------t~avi~v---h~~G~~~~~~~i~~~~~~  145 (371)
T d2fnua1          75 EIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINER------TKAIVSV---DYAGKSVEVESVQKLCKK  145 (371)
T ss_dssp             EEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTT------EEEEEEE---CGGGCCCCHHHHHHHHHH
T ss_pred             eeecccccccccceeeeccCcccccccccccccccchhhhhhccch------hhccccc---cccccccccccccccccc
Confidence            7999999999999999989999999999988888888887766543      3356555   577999999999999999


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      ++++++.|+|++.++.....   ..-....+..+++.+.|.+.. .+.|++
T Consensus       146 ~~i~lIEDaaqa~Ga~~~~~---~~G~~g~~~~~Sf~~~K~l~~-g~GG~i  192 (371)
T d2fnua1         146 HSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAIKPITT-AEGGAV  192 (371)
T ss_dssp             HTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCC-SSCEEE
T ss_pred             cchhhccchhhccCceeccc---cCCcccccccccccccccccc-ccceEE
Confidence            99999999999998754321   111234578888888998755 334443

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.12  E-value=2.2e-10  Score=110.76  Aligned_cols=138  Identities=12%  Similarity=-0.032  Sum_probs=110.5

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      |..++++++.+|+++..|++.                   ++...++|+|+++++..++.+..+                
T Consensus        67 g~~~Lr~aia~~~~~~~g~~~-------------------~~~~I~vt~G~~~al~~~~~~~~~----------------  111 (394)
T d1c7na_          67 PTEEYKKTVKKWMKDRHQWDI-------------------QTDWIINTAGVVPAVFNAVREFTK----------------  111 (394)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCC-------------------CGGGEEEESSHHHHHHHHHHHHCC----------------
T ss_pred             CCHHHHHHHHHHHHHhcCCCC-------------------CCcceEeeccchhhhhhhhccccc----------------
Confidence            445788999999999999984                   445789999999999988876432                


Q ss_pred             hhcCceEEEecCCCchHHHHHHHHcCCeEEEEec---CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         238 EINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES---DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       238 ~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~---d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                         ++..|++....++.........+.+.+.++.   +..+.+|.+.++..+...     .+.+++.+.++|+||.+   
T Consensus       112 ---pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~~i~l~~P~NPTG~v~s~  183 (394)
T d1c7na_         112 ---PGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVWKK  183 (394)
T ss_dssp             ---TTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBCCCH
T ss_pred             ---cccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccc-----cceEEEecccccccceeccH
Confidence               3457888888999999888887777777765   345678988888876432     24578888999999998   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +.+++|+++|+++++||++|.+|.-..
T Consensus       184 ~~l~~l~~~a~~~~~~ii~De~Y~~~~  210 (394)
T d1c7na_         184 DELQKIKDIVLKSDLMLWSDEIHFDLI  210 (394)
T ss_dssp             HHHHHHHHHHHHSSCEEEEECTTTTCB
T ss_pred             HHhhhhhccccccceeEeccccccccc
Confidence            668889999999999999999998653

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.11  E-value=2.8e-10  Score=110.93  Aligned_cols=139  Identities=11%  Similarity=0.044  Sum_probs=110.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+.+|.+.+                  .....++|+|+++++..++.+..+               
T Consensus        66 ~G~~~lReaiA~~~~~~~g~~~~------------------p~~~I~it~G~~~al~~~~~~l~~---------------  112 (418)
T d2r5ea1          66 FGHPRLVQALSKLYSQLVDRTIN------------------PMTEVLVTVGAYEALYATIQGHVD---------------  112 (418)
T ss_dssp             TCCHHHHHHHHHHHHHHHTSCCC------------------TTTSEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCC------------------ccceEEEcCCCchhhhhhhhhccc---------------
Confidence            46677888999999999998841                  124689999999999888766432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC----------CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCC
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK----------LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTT  306 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~----------g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT  306 (375)
                          ++..|++.+.++.++...+...+.+++.|+++.+          +.++.+.++++....      +.+++.+.++|
T Consensus       113 ----~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~p~N  182 (418)
T d2r5ea1         113 ----EGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMIIINTPHN  182 (418)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECCHHHHHHHCCTT------EEEEEEESSCT
T ss_pred             ----cccceeccccccchhhHHHHHcCCeEEEEEecccccccchhhhhhhhhHHHHhhhhhcc------ccceecCCcCc
Confidence                3567889999999999999988889999987532          457777777665433      45777888999


Q ss_pred             Ccccc---ccHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         307 GACAF---DNLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       307 ~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      +||.+   +.+++|+++|++++++++.|.+|....
T Consensus       183 PtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~  217 (418)
T d2r5ea1         183 PLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMV  217 (418)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred             cccccccHHHHHHHhhhhhcCCeeeecccchhhhc
Confidence            99988   567889999999999999999997653

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.07  E-value=1.4e-09  Score=104.14  Aligned_cols=158  Identities=17%  Similarity=0.089  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ++..+.+++.+|..                       ..+++++||.|+.+||.+..-                  .++.
T Consensus        24 ~~fE~~~~~~~~~~-----------------------~~~~~~SgT~Al~lal~~l~~------------------~~gd   62 (374)
T d1o69a_          24 NRFEQSVKDYSKSE-----------------------NALALNSATAALHLALRVAGV------------------KQDD   62 (374)
T ss_dssp             HHHHHHHHHHHCCS-----------------------EEEEESCHHHHHHHHHHHTTC------------------CTTC
T ss_pred             HHHHHHHHHHHCcC-----------------------eEEEeCCHHHHHHHHHHHcCC------------------CCcC
Confidence            77888899999877                       379999999999999976421                  2456


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHh
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEK  323 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~  323 (375)
                      .|+++..++.+...++...|.+++.+.+|++..++....++.......   .+.+|+++   ...|...++++|.++|++
T Consensus        63 eVi~p~~t~~a~~~~~~~~g~~pv~~Di~~~~~~~~~~~~~~~~~~~~---~~~aii~~---~~~G~~~d~~~i~~~~~~  136 (374)
T d1o69a_          63 IVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECEK---KPKALILT---HLYGNAAKMDEIVEICKE  136 (374)
T ss_dssp             EEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSS---CCCEEEEE---CGGGCCCCHHHHHHHHHH
T ss_pred             EEEeCCcchHhhHHHHhhccceeEecccccccccccccccccchhccc---cccccccc---ccccchhhhHHHHHHhhc
Confidence            899999999999999988889999999987655554444443333222   13355555   357888999999999999


Q ss_pred             cCCEEEEecccccCcccchhhhhhhcC-CCcccEEEEcCcccCCCCCccee
Q psy1596         324 EGLWLHVDAAYAGSSFICPEFRKWLAG-VEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       324 ~~iwlHVDaA~gg~~~~~~~~~~~~~g-ie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +|++|+.|+|++.++-.-    ...-| +..+-.++|.+.|.+.. .+.|+
T Consensus       137 ~~i~vIED~a~a~g~~~~----~~~~G~~gd~~~fSf~~~K~l~t-geGG~  182 (374)
T d1o69a_         137 NDIVLIEDAAEALGSFYK----NKALGTFGEFGVYSYNGNKIITT-SGGGM  182 (374)
T ss_dssp             TTCEEEEECTTCTTCEET----TEETTSSSSEEEEECCTTSSSCC-SSCEE
T ss_pred             cCcchhhhhhhhhcceEC----CeecCCCCceEEEeccCcccccc-cccee
Confidence            999999999999986432    22222 22334455555587654 34444

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.05  E-value=1.4e-09  Score=103.92  Aligned_cols=167  Identities=9%  Similarity=-0.012  Sum_probs=121.0

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+..|.+.                   +....++|+|+++++..++.+..+               
T Consensus        65 ~G~~~lR~aia~~~~~~~~~~~-------------------~~~~i~~t~G~~~al~~~~~~l~~---------------  110 (375)
T d1o4sa_          65 RGIYELREGIAKRIGERYKKDI-------------------SPDQVVVTNGAKQALFNAFMALLD---------------  110 (375)
T ss_dssp             TCCHHHHHHHHHHHHHHHTCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             cCCHHHHHHHHhhhhhcccccc-------------------ccccccccCcHHHHHHHHHHHHhC---------------
Confidence            3677888999999999999874                   445789999999998877765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                          ++..|++.+..+..........+.....++.+  +++.+|.+.++......      +.+++.+.++++||.+   
T Consensus       111 ----~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~nP~NPTG~~~s~  180 (375)
T d1o4sa_         111 ----PGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVVYRR  180 (375)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCH
T ss_pred             ----CCCEEEEccCccccchhhhhccccccccccccccccccchhHHHHHhhccC------ccEEEEeCCCCCccCCCCH
Confidence                34468888889888888877777777777764  56778888877654433      4478888899999987   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhh--hhhhcCCCcccEEEEcCcccCCCC
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEF--RKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~--~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +.+++|+++|++|++||+.|.+|+....-.+..  ......-++ -.+..++.|.++.|
T Consensus       181 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~l~  238 (375)
T d1o4sa_         181 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDR-IVYINGFSKSHSMT  238 (375)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTT-EEEEEESTTTTTCG
T ss_pred             HHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCC-EEEEeechhhccCC
Confidence            678889999999999999999988754311110  011111122 24667889977644

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.04  E-value=5.1e-10  Score=107.50  Aligned_cols=171  Identities=14%  Similarity=0.038  Sum_probs=119.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+..|.+.                   ++...++|+|+++++..++.+..+               
T Consensus        64 ~G~~~LR~aia~~~~~~~g~~~-------------------~~~~I~it~G~~~~l~~~~~~l~~---------------  109 (389)
T d2gb3a1          64 AGIWELREAFASYYKRRQRVDV-------------------KPENVLVTNGGSEAILFSFAVIAN---------------  109 (389)
T ss_dssp             TCCHHHHHHHHHHHHHTSCCCC-------------------CGGGEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             cCCHHHHHHHHHHHHHhcCCCc-------------------ccceEEeccccccccccccccccc---------------
Confidence            4667788999999999988874                   345689999999988777665432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCC-CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDK-LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~-g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                          ++..|++....+......+...+..++.++.+++ +..+.+.+.+.+.+      .+.+++.+.++++||.+   +
T Consensus       110 ----~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~nP~NPtG~~~s~~  179 (389)
T d2gb3a1         110 ----PGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINE------RTKGIVLSNPCNPTGVVYGKD  179 (389)
T ss_dssp             ----TTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCT------TEEEEEEESSCTTTCCCCCHH
T ss_pred             ----CCCeEEEeCCCCccccccccccCccccccccccccccchhhhhhhhccc------CccEEEeCCCCccccccchHH
Confidence                3457888899999888888877788888888643 33444444433322      24477778899999987   6


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC-Ccce
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH-FDCT  372 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P-~~~g  372 (375)
                      .+++|+++|++++++++.|.+|+....-.+ ..........-..+..+..|.+.+| .=+|
T Consensus       180 ~~~~i~~~a~~~~~~iI~De~y~~~~~~~~-~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG  239 (389)
T d2gb3a1         180 EMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASALSIESDKVVVIDSVSKKFSACGARVG  239 (389)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCGGGSCCTTEEEEEESTTTTTCGGGCCE
T ss_pred             HHHHHHhhcccCCEEEEEeccccccccccc-cccccccccccccccccccccccCccccee
Confidence            799999999999999999999977543211 1111111222244566778887766 3344

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=98.95  E-value=4.9e-09  Score=100.67  Aligned_cols=139  Identities=9%  Similarity=0.041  Sum_probs=109.4

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+.+|.+..                  .....++|+|+++++..++.+..+               
T Consensus        63 ~G~~~LReaia~~~~~~~g~~~~------------------~~~~I~vt~G~~~al~~~~~~l~~---------------  109 (382)
T d1u08a_          63 TGVQALREAIAQKTERLYGYQPD------------------ADSDITVTAGATEALYAAITALVR---------------  109 (382)
T ss_dssp             TCCHHHHHHHHHHHHHHHSCCCC------------------TTTTEEEESSHHHHHHHHHHHHCC---------------
T ss_pred             cCCHHHHHHHHHHHHHHhCCCCC------------------CCceEEeccchHHHHHHHHhhccc---------------
Confidence            56777888999999999998731                  223589999999999888776533               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---c
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---D  312 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---D  312 (375)
                          ++..|++++..++.........+..+..++.+ +.+.+|.++|++++.+.      +.+++.+.++++||.+   +
T Consensus       110 ----~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~P~NPtG~v~~~~  179 (382)
T d1u08a_         110 ----NGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSER------TRLVILNTPHNPSATVWQQA  179 (382)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHH
T ss_pred             ----ccceEEEecccccchhhhhhhccccceecccccccccCCHHHHhhhhccC------ccEEEECCCCcccccccccc
Confidence                34578888999988888887777777777775 56778999998876553      4478888899999998   5


Q ss_pred             cHHHHHHHHHhcCCEEEEecccccCc
Q psy1596         313 NLEELGPICEKEGLWLHVDAAYAGSS  338 (375)
Q Consensus       313 pl~eI~~ia~~~~iwlHVDaA~gg~~  338 (375)
                      .+++|+++|++++++++.|..|.-..
T Consensus       180 ~~~~l~~~~~~~~~~ii~d~~~~~~~  205 (382)
T d1u08a_         180 DFAALWQAIAGHEIFVISDEVYEHIN  205 (382)
T ss_dssp             HHHHHHHHHTTSCCEEEEECTTTTCB
T ss_pred             cchhhhhhhccccceeeeecchhhcc
Confidence            57788888999999999999987643

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.4e-09  Score=106.02  Aligned_cols=174  Identities=8%  Similarity=0.016  Sum_probs=121.1

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+.+|.+.+                  +....++|+|+++++..++.+..+               
T Consensus        64 ~G~~~LReaia~~~~~~~g~~~~------------------~~~~I~it~G~~~al~~~~~~l~~---------------  110 (418)
T d1w7la_          64 FGYPPLTKILASFFGELLGQEID------------------PLRNVLVTVGGYGALFTAFQALVD---------------  110 (418)
T ss_dssp             TCCHHHHHHHHHHHHHHHTCCCC------------------HHHHEEEESHHHHHHHHHHHHHCC---------------
T ss_pred             cCCHHHHHHHHHHHHHHhCCCCC------------------cccceeeccCcHHHHHHHHHhhcc---------------
Confidence            45667778899999999998831                  113589999999998887765432               


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecC------------CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD------------DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d------------~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                          ++..|++.+.....+...+...+.+++.++.+            +++.+|.+++...+.+.      ..+++.+.+
T Consensus       111 ----~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~~i~~~~p  180 (418)
T d1w7la_         111 ----EGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALVLNTP  180 (418)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHCCTT------EEEEEEESS
T ss_pred             ----CCceeeccccccchhHHHHHHcCCEeeccccccccccccccccccCcccchhhhhcccccc------ccceeccCc
Confidence                34578888899888888888888787777753            34567777776654332      457888889


Q ss_pred             CCCcccc---ccHHHHHHHHHhcCCEEEEecccccCcccchhhhh--hhcCCCcccEEEEcCcccCCCC-Cccee
Q psy1596         305 TTGACAF---DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRK--WLAGVEYANSIAFNPSKWLMVH-FDCTA  373 (375)
Q Consensus       305 tT~tGav---Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~--~~~gie~aDSi~~d~HK~l~~P-~~~g~  373 (375)
                      +++||.+   +.+++|+++|+++++++++|.+|.....-.+....  .+.+...--.+..++.|.++.| .-+|.
T Consensus       181 ~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~  255 (418)
T d1w7la_         181 NNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGW  255 (418)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEE
T ss_pred             CCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCcccc
Confidence            9999987   67889999999999999999999775321110000  0111111134677888976655 44554

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=98.93  E-value=6.8e-09  Score=99.32  Aligned_cols=160  Identities=10%  Similarity=-0.087  Sum_probs=111.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhc
Q psy1596         161 KYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEIN  240 (375)
Q Consensus       161 ~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~  240 (375)
                      ++-+++.+.|+++++.+.                     ...+|++|||+++-.++.....                   
T Consensus        33 ~i~~~~~~~l~~ll~~~~---------------------~~i~~~gsgT~a~e~~~~nl~~-------------------   72 (348)
T d1iuga_          33 EVFLKARGLLREAFRTEG---------------------EVLILTGSGTLAMEALVKNLFA-------------------   72 (348)
T ss_dssp             HHHHHHHHHHHHHHTCSS---------------------EEEEEESCHHHHHHHHHHHHCC-------------------
T ss_pred             HHHHHHHHHHHHHhCCCC---------------------CEEEEeCchHHHHHHHHHhccc-------------------
Confidence            344788999999998762                     2478899999997666654321                   


Q ss_pred             CceEEEecCCCchHHHHH--HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         241 SRLVAYCSDQAHSSVEKA--GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~ka--a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      ++..+++....+++-.-+  +...+.++..+..+..-..+++++        ++ ..+..|+.+...|.+|.+.|+++|+
T Consensus        73 ~g~~vlv~~~G~f~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~--------~~-~~~~~v~~~h~eTstG~~~~i~~i~  143 (348)
T d1iuga_          73 PGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDV--------AK-EGYAGLLLVHSETSTGALADLPALA  143 (348)
T ss_dssp             TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTS--------CC-SSCSEEEEESEETTTTEECCHHHHH
T ss_pred             ccccceeecchHHHHHHHHHHHhcCcccccccccCCCccccccc--------cc-cCCCeeEEEecchhhhhhccHHHHH
Confidence            223455556677665433  233455666666543333343221        11 2245789999999999999999999


Q ss_pred             HHHHhcC--CEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceeeC
Q psy1596         319 PICEKEG--LWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAMW  375 (375)
Q Consensus       319 ~ia~~~~--iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l~  375 (375)
                      ++|++++  ..++||+..+.++...+- .  ..+   +|.+..++|||++.|.|.|+++
T Consensus       144 ~~~~~~~~~~l~~vDavss~g~~~i~~-d--~~~---iD~~~~~sqK~l~gppG~~~v~  196 (348)
T d1iuga_         144 RAFKEKNPEGLVGADMVTSLLVGEVAL-E--AMG---VDAAASGSQKGLMCPPGLGFVA  196 (348)
T ss_dssp             HHHHHHCTTCEEEEECTTTBTTBCCCS-G--GGT---CSEEEEESSSTTCCCSCEEEEE
T ss_pred             HHHHhhhccceeechhhhccccccccc-c--ccc---CCEEEeccccceecCCceeeee
Confidence            9999985  799999988887653321 1  113   5999999999999999999874

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=98.88  E-value=2.5e-09  Score=104.53  Aligned_cols=164  Identities=13%  Similarity=0.053  Sum_probs=118.9

Q ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhh
Q psy1596         159 RDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAE  238 (375)
Q Consensus       159 ~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~  238 (375)
                      ..++|.-+++...++||...                      .-+-..+||.||+.++.+..+                 
T Consensus        70 iD~iE~la~~ra~~lF~a~~----------------------anVqp~SGs~AN~av~~All~-----------------  110 (416)
T d1dfoa_          70 VDIVEQLAIDRAKELFGADY----------------------ANVQPHSGSQANFAVYTALLE-----------------  110 (416)
T ss_dssp             HHHHHHHHHHHHHHHHTCSE----------------------EECCCSSHHHHHHHHHHHHCC-----------------
T ss_pred             HHHHHHHHHHHHHHHhCCCc----------------------ceeecccCccHHHHHHHHhcC-----------------
Confidence            47788889999999999872                      123457899999988876533                 


Q ss_pred             hcCceEEEecC---CCchHHHHHHHHc--CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc
Q psy1596         239 INSRLVAYCSD---QAHSSVEKAGLIG--LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN  313 (375)
Q Consensus       239 ~~~~~vV~~S~---~aH~Sv~kaa~lg--~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp  313 (375)
                        |++.|+.-+   -.|.+.-..+...  ..+.+..++|+++.+|.++|++.+++.+     |.+|++  |.+...-.-|
T Consensus       111 --pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~a~~~k-----PklIi~--G~S~y~r~~d  181 (416)
T d1dfoa_         111 --PGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHK-----PKMIIG--GFSAYSGVVD  181 (416)
T ss_dssp             --TTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHHHHHHC-----CSEEEE--ECSSCCSCCC
T ss_pred             --CCCeeeeccccccccccccccccccCceEEEEecccCCccCccHHHHHHHHHHhc-----cceEEe--cccccccccC
Confidence              334555443   3455544333222  2366777788889999999999988753     666654  4566777788


Q ss_pred             HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         314 LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       314 l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      ++++.+||++.|.++++|.||-.+.+....+   -..+++||.|+.+.||.|..|-|.=+
T Consensus       182 ~~~~reiad~vga~l~~D~aH~~GLIa~g~~---~sP~~~aDvvt~tThKtlrGPrggiI  238 (416)
T d1dfoa_         182 WAKMREIADSIGAYLFVDMAHVAGLVAAGVY---PNPVPHAHVVTTTTHKTLAGPRGGLI  238 (416)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTHHHHHHTSS---CCCTTTSSEEEEESSSTTCCCSCEEE
T ss_pred             HHHHHHHHHhcCceEEcchhhhhcceecccc---CCcccccceeeeehhhcccCCCceEE
Confidence            9999999999999999999998775433222   23466799999999999999986543

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=98.88  E-value=2e-08  Score=94.92  Aligned_cols=155  Identities=14%  Similarity=0.093  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      .++++++++.+|.+.                     ...++|+|+++++...+.+. .                  .+..
T Consensus        60 ~~Lr~aia~~~~v~~---------------------~~I~~~~g~~~~~~~~~~~~-~------------------~~~~   99 (355)
T d1lc5a_          60 FHLHQALARHHQVPA---------------------SWILAGNGETESIFTVASGL-K------------------PRRA   99 (355)
T ss_dssp             HHHHHHHHHHHTSCG---------------------GGEEEESSHHHHHHHHHHHH-C------------------CSEE
T ss_pred             HHHHHHHHHHhCCCH---------------------HHEEecccHHHHHHHHHhhh-c------------------cccc
Confidence            567888888889872                     34677887777766544321 1                  0122


Q ss_pred             EEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLEELG  318 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~eI~  318 (375)
                      +|  ....+..+.....+.+.+++.+|++  +++.++ +++++++.+.      +.+|+.+.++++||.+   +.+.+|+
T Consensus       100 ~v--~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~------~~~v~l~nP~NPtG~~~~~e~l~~i~  170 (355)
T d1lc5a_         100 MI--VTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERPLLQAIA  170 (355)
T ss_dssp             EE--EESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred             cc--cCCccceeccccccccccceeeeeeccCCccce-eeeeeccccc------cceeeeecccCcccccchhhhhhhhh
Confidence            33  3344555555566667788888874  344444 4455544332      4477788899999997   4588888


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      ++|++|++++++|.+|.....-.+........ ..-..+..++.|+++.|
T Consensus       171 ~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~l~  219 (355)
T d1lc5a_         171 DRCKSLNINLILDEAFIDFIPHETGFIPALKD-NPHIWVLRSLTKFYAIP  219 (355)
T ss_dssp             HHHHHHTCEEEEECTTGGGSTTCCCSGGGCTT-CTTEEEEEESTTTTTCT
T ss_pred             hhccccccccccccceeeeeeecccccccccc-cccceeecccccccccc
Confidence            99999999999999997643211111111111 11246778999997755

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=98.86  E-value=3.4e-08  Score=95.21  Aligned_cols=96  Identities=14%  Similarity=0.071  Sum_probs=81.5

Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLE  315 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~  315 (375)
                      ++..|++++..+......+++.|.+++.+|+  ++++.+|.+.+.+.+.....   +..+++.+.++|+||.+   +.++
T Consensus       122 pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~iii~~p~NPTG~~~s~e~~~  198 (401)
T d7aata_         122 FSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPE---KSIILLHACAHNPTGVDPRQEQWK  198 (401)
T ss_dssp             TCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCT---TCEEEEESSSCTTTCCCCCHHHHH
T ss_pred             CCceEEEecCCCcchhhHHHHcCCeEEEEeccccccccccHHHHHHHHhcCCC---ceEEEEecCCCCCccccCCHHHHH
Confidence            4568999999999999889999999999997  45678899999888765322   35688888999999998   6789


Q ss_pred             HHHHHHHhcCCEEEEecccccCcc
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                      +|+++|++|+++++.|.+|.....
T Consensus       199 ~l~~~a~~~~~~ii~De~Y~~l~~  222 (401)
T d7aata_         199 ELASVVKKRNLLAYFDMAYQGFAS  222 (401)
T ss_dssp             HHHHHHHHTTCEEEEEESCTTTTT
T ss_pred             HHHHHHhcceEEEEEeccchhhhc
Confidence            999999999999999999988654

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.82  E-value=7.1e-09  Score=100.84  Aligned_cols=166  Identities=10%  Similarity=0.030  Sum_probs=118.3

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhh
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHA  237 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~  237 (375)
                      -.+++|..+++...++||...                      .-+=..+||.||+....+..+                
T Consensus        66 ~id~iE~la~~ra~~lF~a~~----------------------anVqp~SGs~An~av~~all~----------------  107 (405)
T d1kl1a_          66 YVDIVEELARERAKQLFGAEH----------------------ANVQPHSGAQANMAVYFTVLE----------------  107 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSE----------------------EECCCSSHHHHHHHHHHHHCC----------------
T ss_pred             hHHHHHHHHHHHHHHHhCCCc----------------------ceeeccCchHHHHHHHHHhcC----------------
Confidence            357788889999999999872                      123346899999888776533                


Q ss_pred             hhcCceEEEec---CCCchHHHHHHHHc--CCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         238 EINSRLVAYCS---DQAHSSVEKAGLIG--LVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       238 ~~~~~~vV~~S---~~aH~Sv~kaa~lg--~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                         |++.|+.-   .-.|.|.-+.....  ..+++..|+| +++.+|.++|++.+++.+     |.+|++  |.+..--.
T Consensus       108 ---pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~~a~~~k-----PklIi~--G~S~y~r~  177 (405)
T d1kl1a_         108 ---HGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHR-----PKLIVA--AASAYPRI  177 (405)
T ss_dssp             ---TTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC-----CSEEEE--CCSSCCSC
T ss_pred             ---CCCEEEEeecccccccccCccccccceEEEEEEeccchhcccccHHHHHHHHHhhC-----cceEEe--cccccccc
Confidence               33445433   35566654433221  2467777887 678899999999998753     655543  44555555


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                      -|++++.+||++.|.+|++|+||-.+.+....+.   ..+++||.|+.+.||.|..|-|.=++
T Consensus       178 ~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~---~P~~~aDvvt~tThKtlrGPrgg~I~  237 (405)
T d1kl1a_         178 IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRGGMIL  237 (405)
T ss_dssp             CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSCEEEE
T ss_pred             cChHHHHHHHhhhCCEEecchhhHhhhhhhhhcC---ChhhhhhheeccccccccCCCCceEE
Confidence            6799999999999999999999977755433222   24578999999999999999876444

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.77  E-value=6.9e-08  Score=92.46  Aligned_cols=143  Identities=13%  Similarity=0.087  Sum_probs=104.6

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+++.+.-+..                    .....++|+||+.+..+++......              
T Consensus        69 ~G~~~lr~aia~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~l~~~~~~~~--------------  114 (394)
T d2ay1a_          69 SGEPEFQKAMGELILGDGLKS--------------------ETTATLATVGGTGALRQALELARMA--------------  114 (394)
T ss_dssp             SCCHHHHHHHHHHHHGGGCCG--------------------GGEEEEEEEHHHHHHHHHHHHHHHH--------------
T ss_pred             CCCHHHHHHHHHHHhcccccc--------------------ccccceeccCchHHHHHHHHHhhhc--------------
Confidence            466667777777776553332                    2345677888877765554432221              


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                         .++..|++++.........++..|.+++.+|.  ++.+..+.+.+++.......   +..+++.+.++|+||.+   
T Consensus       115 ---~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~p~NPTG~~~s~  188 (394)
T d2ay1a_         115 ---NPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKK---GDMVLLHGCCHNPTGANLTL  188 (394)
T ss_dssp             ---CTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCT---TCEEEEESSSCTTTCCCCCH
T ss_pred             ---CCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhHHHHHhhccc---CcEEEEeCCCCCCCCCCCCH
Confidence               13567999999999988888888889998987  35667788888777665332   24577777899999988   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                      +.+++|+++|++++++++.|.+|.....
T Consensus       189 e~~~~l~~la~~~~~~ii~De~Y~~l~~  216 (394)
T d2ay1a_         189 DQWAEIASILEKTGALPLIDLAYQGFGD  216 (394)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEECCTTSSS
T ss_pred             HHHHHHHHHhhcceEEEEEeccchhhcc
Confidence            6799999999999999999999988753

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=98.76  E-value=7e-08  Score=93.30  Aligned_cols=151  Identities=11%  Similarity=0.023  Sum_probs=103.8

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++++.+|+.+-.+.+.         .        .+....+.|++++.++..+..+......            
T Consensus        74 ~G~p~lreaia~~~~~~~~~~~---------~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------  124 (412)
T d1ajsa_          74 LGLAEFRTCASRLALGDDSPAL---------Q--------EKRVGGVQSLGGTGALRIGAEFLARWYN------------  124 (412)
T ss_dssp             TCCHHHHHHHHHHHHCTTCHHH---------H--------TTCEEEEEEEHHHHHHHHHHHHHHHHSS------------
T ss_pred             CCCHHHHHHHHHHHhccCCccc---------c--------cccceeecccchhhHHHHHHHHHHHHhh------------
Confidence            4455555666666665444321         0        0233466788888887776655433210            


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEe-c--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc--
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIE-S--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF--  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp-~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav--  311 (375)
                      ..+.++..|++++.........+.+.|.+.+.++ .  ++.+..|.+++++.+.....   ...+++.+.++|+||.+  
T Consensus       125 ~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~il~~~P~NPTG~v~s  201 (412)
T d1ajsa_         125 GTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPE---FSIFVLHACAHNPTGTDPT  201 (412)
T ss_dssp             SSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCT---TCEEEEESSSCTTTCCCCC
T ss_pred             hcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeecccccccccccHHHHHHHHHhccC---CcEEEEecCCCCCcCCCCC
Confidence            0012566899999999999888887776644443 3  34567899988887765332   25577888899999998  


Q ss_pred             -ccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596         312 -DNLEELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       312 -Dpl~eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                       +.+++|+++|++||++++.|.+|.....
T Consensus       202 ~e~~~~i~~la~~~~~~ii~De~Y~~l~~  230 (412)
T d1ajsa_         202 PEQWKQIASVMKRRFLFPFFDSAYQGFAS  230 (412)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEEESCTTTTT
T ss_pred             HHHHHHHHHHHhhCCEEEEecHhhhhhhc
Confidence             6799999999999999999999987643

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=98.75  E-value=1.2e-07  Score=91.14  Aligned_cols=146  Identities=9%  Similarity=0.018  Sum_probs=104.3

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|..++++.+.+|+.+..+....                 ......+.|+||+.+...++......              
T Consensus        69 ~G~~~lR~aia~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~~l~~~--------------  117 (396)
T d2q7wa1          69 DGIPEFGRCTQELLFGKGSALIN-----------------DKRARTAQTPGGTGALRVAADFLAKN--------------  117 (396)
T ss_dssp             TCCHHHHHHHHHHHHCTTCHHHH-----------------TTCEEEEEESHHHHHHHHHHHHHHHH--------------
T ss_pred             cCCHHHHHHHHHHHHhhcCCccc-----------------ccceeeeccchHHHHHHHHHHHHhhc--------------
Confidence            46677778888888776554310                 02223456667766654444332211              


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---  311 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---  311 (375)
                         .++..|++++....+....+...|.+++.+|.  ++++..+...+++.+.....   ...+++.+.++|+||.+   
T Consensus       118 ---~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~P~NPTG~~~s~  191 (396)
T d2q7wa1         118 ---TSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQA---GDVVLFHGCCHNPTGIDPTL  191 (396)
T ss_dssp             ---SCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCT---TCEEEEECSSCTTTCCCCCH
T ss_pred             ---ccceEEEEecCCCccchHHHHHcCCeeEecccccccccccccchHHHHHHHhcc---CcEEEEecCCcCCcCeecCH
Confidence               14568999999999998888888899999987  34566788877777654322   35678888899999997   


Q ss_pred             ccHHHHHHHHHhcCCEEEEecccccCcc
Q psy1596         312 DNLEELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       312 Dpl~eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                      +.+++|+++|++|+++++.|.+|.....
T Consensus       192 e~~~~l~~la~~~~~~ii~De~Y~~l~~  219 (396)
T d2q7wa1         192 EQWQTLAQLSVEKGWLPLFDFAYQGFAR  219 (396)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESCTTSSS
T ss_pred             HHHHHHHHHHhcCCeEEEEecccccccc
Confidence            6788999999999999999999987643

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=98.72  E-value=7e-08  Score=91.30  Aligned_cols=156  Identities=10%  Similarity=-0.046  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc-
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR-  242 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~-  242 (375)
                      .++++++++.+|++.                     ...++|+|+++++..++.+...                   ++ 
T Consensus        59 ~~Lr~~ia~~~gv~p---------------------e~I~it~Gs~eai~~~~~~~~~-------------------pgd   98 (354)
T d1fg7a_          59 KAVIENYAQYAGVKP---------------------EQVLVSRGADEGIELLIRAFCE-------------------PGK   98 (354)
T ss_dssp             HHHHHHHHHHHTSCG---------------------GGEEEESHHHHHHHHHHHHHCC-------------------TTT
T ss_pred             HHHHHHHHHHhCCCh---------------------HHeeeccCchHHHHHHHHHhhc-------------------ccc
Confidence            678899999999972                     3689999999998888765432                   22 


Q ss_pred             eEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHH--
Q psy1596         243 LVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPI--  320 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~i--  320 (375)
                      .+|+++..++..+...+.+.|.+++.++.++++.+|++++++++.+       +.+|+.+.+++++|.+-+-+++..+  
T Consensus        99 ~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~d~~~l~~~~~~-------~~~v~~~~pnNPtG~~~~~~~~~~~~~  171 (354)
T d1fg7a_          99 DAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDG-------VKVVYVCSPNNPTGQLINPQDFRTLLE  171 (354)
T ss_dssp             CEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCTT-------EEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             ccccccccccccchhhhhccCceeeccccccccccchhhhhhcccc-------cceeeccCCCccceeEeeecccccccc
Confidence            3688899999888888888888999999999999999999876632       4478888899999998554443333  


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +.+++.++++|.+|.-...-  ...........--.+.-++.|.++.|
T Consensus       172 ~~~~~~~~iidd~~~~f~~~--~~~~~~~~~~~~~iv~~S~SK~~~la  217 (354)
T d1fg7a_         172 LTRGKAIVVADEAYIEFCPQ--ASLAGWLAEYPHLAILRTLSKAFALA  217 (354)
T ss_dssp             HHTTTCEEEEECTTGGGSGG--GCSGGGTTTCTTEEEEEESSSTTCCG
T ss_pred             cccccccccccccchhhccc--cccchhhcccccceEEeCCccccCCC
Confidence            23467888888887643211  00011111111234556999998755

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=98.71  E-value=1e-08  Score=98.87  Aligned_cols=96  Identities=13%  Similarity=0.008  Sum_probs=78.5

Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEecC--CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIESD--DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLE  315 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d--~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~  315 (375)
                      ++..|++++..+.+....++..|.+++.+|++  +.+..|.+++.+.+....   ..+.+++.+.++|+||.+   +.++
T Consensus       120 pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~NPTG~~~s~~~~~  196 (397)
T d3tata_         120 PESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLP---ARSIVLLHPCCHNPTGADLTNDQWD  196 (397)
T ss_dssp             SSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCHHHHHHHHTTCC---SSCCCEECSSSCSSSCCCCCHHHHH
T ss_pred             CCCcceecccCccccHHHHHHcCCEEEEEecchhhccccchHHHHHHhhhcc---cccEEEEecCCCCCCCeeCCHHHHH
Confidence            45679999999999999999888899999984  456678888877765432   234567777799999988   7788


Q ss_pred             HHHHHHHhcCCEEEEecccccCcc
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                      +|+++|++++++++.|.+|.....
T Consensus       197 ~l~~~a~~~~~~ii~De~Y~~l~~  220 (397)
T d3tata_         197 AVIEILKARELIPFLDIAYQGFGA  220 (397)
T ss_dssp             HHHHHHHHTTCCCEECBSCTTSSS
T ss_pred             HHHHHHhhcCeeEEeehhhhhhcc
Confidence            999999999999999999988643

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=98.71  E-value=8e-08  Score=93.43  Aligned_cols=144  Identities=13%  Similarity=0.020  Sum_probs=114.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++-|-+                       .++++++|..|+..++.+...                   ++.
T Consensus        62 ~~LE~~la~LEg~~-----------------------~a~~~~SGmaAi~~~l~~l~~-------------------~Gd   99 (392)
T d1gc0a_          62 NLLEARMASLEGGE-----------------------AGLALASGMGAITSTLWTLLR-------------------PGD   99 (392)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCc-----------------------ceeehhhHHHHHHHHHHhhcc-------------------CCC
Confidence            67788899986654                       478899999988887765432                   356


Q ss_pred             EEEecCCCchHHHHHHH--H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL--I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~--l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+....+-+.  +  .|+++..++.     .|+++++++|++.+      .+|.+..+++++..+.||++|++
T Consensus       100 ~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~-----~d~~~~~~ai~~~t------~lv~~Esp~NP~l~v~Di~~i~~  168 (392)
T d1gc0a_         100 EVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-----ADLQALEAAMTPAT------RVIYFESPANPNMHMADIAGVAK  168 (392)
T ss_dssp             EEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-----TCHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred             eeecccccchhhhhhhhhhhccCCcccccCCc-----cCHHHHHHhCCCCC------eEEEecccccceeeecchHHHHH
Confidence            88899988888777663  2  3677777764     38899999997654      38899999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      +|+++|+.++||..|+.+.+.-|    +-.|   ||-+.-|..|++..
T Consensus       169 ia~~~g~~~vvDnT~atP~~~~P----l~~G---aDivihS~TKyi~G  209 (392)
T d1gc0a_         169 IARKHGATVVVDNTYCTPYLQRP----LELG---ADLVVHSATKYLSG  209 (392)
T ss_dssp             HHGGGTCEEEEECTTTHHHHCCG----GGGT---CSEEEEETTTTTTC
T ss_pred             HHHhcCCEEEEecCccCccccCh----HHhC---CCEEEEecceeecC
Confidence            99999999999999987654333    2234   79999999999864

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=98.66  E-value=1.4e-07  Score=91.38  Aligned_cols=96  Identities=14%  Similarity=0.068  Sum_probs=80.8

Q ss_pred             CceEEEecCCCchHHHHHHHHcCCeEEEEec--CCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc---ccHH
Q psy1596         241 SRLVAYCSDQAHSSVEKAGLIGLVKMRYIES--DDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF---DNLE  315 (375)
Q Consensus       241 ~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~--d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav---Dpl~  315 (375)
                      +++.|++++.........+...|.+++.+|.  ++++..|.+.+++.+....+   ...+++.+.++|+||.+   +.++
T Consensus       123 ~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~i~~P~NPTG~~~s~~~~~  199 (412)
T d1yaaa_         123 PDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPE---GSIFVLHSCAHNPTGLDPTSEQWV  199 (412)
T ss_dssp             TTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCT---TCEEEEECSSCTTTCCCCCHHHHH
T ss_pred             CCCEEecccccCchhHHHHHHcCCceecccccccccccccchhhhcccccCCC---ceEEEEecCCCCCccccCCHHHHH
Confidence            4567999999998888888888889999986  46678899999888876432   35688889999999998   6799


Q ss_pred             HHHHHHHhcCCEEEEecccccCcc
Q psy1596         316 ELGPICEKEGLWLHVDAAYAGSSF  339 (375)
Q Consensus       316 eI~~ia~~~~iwlHVDaA~gg~~~  339 (375)
                      +|+++|++++++++.|.+|.....
T Consensus       200 ~i~~~a~~~~~~ii~De~Y~~l~~  223 (412)
T d1yaaa_         200 QIVDAIASKNHIALFDTAYQGFAT  223 (412)
T ss_dssp             HHHHHHHHTTCEEEEEESCTTTSS
T ss_pred             HHHhhhccCCEEEeecceeeeccc
Confidence            999999999999999999987643

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=98.65  E-value=2.6e-07  Score=89.82  Aligned_cols=144  Identities=10%  Similarity=0.077  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++-|-+                       .++++++|..|+..++.+...                   ++.
T Consensus        66 ~~LE~~la~LEgg~-----------------------~a~~~sSGmaAi~~~l~~ll~-------------------~Gd  103 (397)
T d1y4ia1          66 DALEKKLAVLERGE-----------------------AGLATASGISAITTTLLTLCQ-------------------QGD  103 (397)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCc-----------------------cceeehHHHHHHHHHHhhccC-------------------CCC
Confidence            67778888886544                       478899999998877765432                   456


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+....+-+.    -.|+++..+..+     |++.++++|++.+      .+|.+-.+++++..+-||++|++
T Consensus       104 ~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~~-----d~~~~~~~i~~~T------klv~~Esp~NP~l~v~Di~~i~~  172 (397)
T d1y4ia1         104 HIVSASAIYGCTHAFLSHSMPKFGINVRFVDAG-----KPEEIRAAMRPET------KVVYIETPANPTLSLVDIETVAG  172 (397)
T ss_dssp             EEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred             eeeeecccccccchhhhcccCCCceEeeccCCC-----CHHHHHHhcCCCC------cEEEecCCcccceeecccHHHHH
Confidence            89999999988877653    247788887653     7899999987643      48999999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMV  367 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~  367 (375)
                      +|+++|++++||..++...+.-|    +..|   ||-+.-|.-|++..
T Consensus       173 iA~~~gi~~vvDnT~atP~~~~P----l~~G---aDivihS~TKyi~G  213 (397)
T d1y4ia1         173 IAHQQGALLVVDNTFMSPYCQQP----LQLG---ADIVVHSVTKYING  213 (397)
T ss_dssp             HHHHTTCEEEEECTTTCTTTCCG----GGGT---CSEEEEETTTTTTC
T ss_pred             HhhcCCceEEecCcccCcccCcc----hhcC---CCEEEEehhhhcCC
Confidence            99999999999999998765444    2234   69999999998864

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.63  E-value=1.2e-07  Score=93.69  Aligned_cols=165  Identities=13%  Similarity=0.017  Sum_probs=116.2

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcE--EEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFI--TFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~G--vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      -..++|..+++...++||++.                    ..++  +=.-+||.||+.+..+..+              
T Consensus        74 ~iD~iE~la~~ra~~lF~~~~--------------------~~~~anVqp~SGs~An~av~~all~--------------  119 (470)
T d1rv3a_          74 HIDELETLCQKRALQAYGLDP--------------------QCWGVNVQPYSGSPANFAVYTALVE--------------  119 (470)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCT--------------------TTEEEECCCSSHHHHHHHHHHHHTC--------------
T ss_pred             hHHHHHHHHHHHHHHHhCCCh--------------------hhccccccccCCccHHHHHHHHhcC--------------
Confidence            467788889999999999972                    2222  3346899999988876543              


Q ss_pred             hhhhcCceEEEe---cCCCchHHHHH-------HHHcCCeEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         236 HAEINSRLVAYC---SDQAHSSVEKA-------GLIGLVKMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       236 ~~~~~~~~vV~~---S~~aH~Sv~ka-------a~lg~~~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                           +++.|+.   +.-.|.|--..       ..-...+.+..++| +.+.+|.++|++..++.+     |.+|+  +|
T Consensus       120 -----pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~~~~IDyd~l~~~a~~~k-----PklIi--~G  187 (470)
T d1rv3a_         120 -----PHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFH-----PKLII--AG  187 (470)
T ss_dssp             -----TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC-----CSEEE--EC
T ss_pred             -----CCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEecccCcccHHHHHHHHHhhC-----cceEe--ec
Confidence                 2334443   33456554311       01112467778887 458999999999988753     65554  35


Q ss_pred             CCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596         305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                      .+..--.-|++++.+||++.|.+|++|+||-.+.+....+..   .+++||.|+.+.||.|..|-|.
T Consensus       188 ~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~s---Pl~~aDvvt~tTHKtlrGPrgG  251 (470)
T d1rv3a_         188 TSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPS---PFEHCHVVTTTTHKTLRGCRAG  251 (470)
T ss_dssp             CSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCC---GGGTCSEEEEESSGGGCCCSCE
T ss_pred             hhhccccCCHHHHHHHHhccCCeEEecchhhhhhccccccCC---hhheeeeeeeehhhhccCCcce
Confidence            566666678999999999999999999999776543332222   2456899999999999999874

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=98.58  E-value=1.7e-07  Score=92.48  Aligned_cols=165  Identities=10%  Similarity=-0.014  Sum_probs=106.3

Q ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcE--EEeCChHHHHHHHHHHHHHHHHHHhhccCCcch
Q psy1596         158 DRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFI--TFQTTASESTLICLLAGRTEAIRKYQQSHPELE  235 (375)
Q Consensus       158 g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~G--vftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~  235 (375)
                      -..++|..+++...++||++.                    ..+|  +=.-+|+.||+.+..+..+              
T Consensus        70 ~iD~iE~la~~ra~~lF~~~~--------------------a~w~vNVqp~SGs~An~av~~all~--------------  115 (463)
T d2a7va1          70 VVDEIELLCQRRALEAFDLDP--------------------AQWGVNVQPYSGSPANLAVYTALLQ--------------  115 (463)
T ss_dssp             -CTHHHHHHHHHHHHHTTCCT--------------------TTEEEECCCSSHHHHHHHHHHHHCC--------------
T ss_pred             hHHHHHHHHHHHHHHHhCCCc--------------------hhccCCccccccHHHHHHHHHHHcC--------------
Confidence            367888999999999999982                    2334  3346899999888776533              


Q ss_pred             hhhhcCceEEE---ecCCCchHHHHH-----HHHcCC--eEEEEecC-CCCCcCHHHHHHHHHHhhhcCCccEEEEEEcC
Q psy1596         236 HAEINSRLVAY---CSDQAHSSVEKA-----GLIGLV--KMRYIESD-DKLSLRGDKLIEAIERDKKKHLIPFFVCGTLG  304 (375)
Q Consensus       236 ~~~~~~~~vV~---~S~~aH~Sv~ka-----a~lg~~--~v~~Vp~d-~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~G  304 (375)
                           ++..|+   .+.-.|.|--..     ....+.  +.....+| +++.+|.+++++.+++.+     |.+|++  |
T Consensus       116 -----pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~~~~IDyd~~~~~a~~~k-----PklIi~--G  183 (463)
T d2a7va1         116 -----PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFR-----PRLIIA--G  183 (463)
T ss_dssp             -----SCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHC-----CSEEEE--C
T ss_pred             -----CCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCCCCcCcHHHHHHHHhhcC-----CceEEe--c
Confidence                 233333   233345544321     112222  34445556 578999999999998763     655543  5


Q ss_pred             CCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcc
Q psy1596         305 TTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDC  371 (375)
Q Consensus       305 tT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~  371 (375)
                      .+..--.-|++++.+||++.|.+|++|+||-++.+....+..   .+++||.|+.+.||+|..|-|.
T Consensus       184 ~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~s---P~~~aDvvt~tTHKTlrGPrgG  247 (463)
T d2a7va1         184 TSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPS---PFKHADIVTTTTHKTLRGARSG  247 (463)
T ss_dssp             CSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCC---GGGTCSEEEEESSGGGCSCSCE
T ss_pred             ccccccccCHHHHHHHhhcccceEEechhhhhHHhhhhhhcC---hhhhhhhhhchhhhhhcCCCce
Confidence            566666678999999999999999999999777544322222   2456899999999999999854

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.58  E-value=2.5e-07  Score=89.59  Aligned_cols=144  Identities=12%  Similarity=0.109  Sum_probs=109.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +.+.+.|+.+-|-+                       .++.+++|..|+ .+++...                   .++.
T Consensus        52 ~~le~~la~LE~~~-----------------------~a~~fsSGMaAi-sall~ll-------------------~~Gd   88 (380)
T d1ibja_          52 DALESLLAKLDKAD-----------------------RAFCFTSGMAAL-SAVTHLI-------------------KNGE   88 (380)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHH-HHHHTTS-------------------CTTC
T ss_pred             HHHHHHHHHHcCCc-----------------------eEEehhhHHHHH-HHHHHhh-------------------CCCC
Confidence            67788888885543                       468889997665 4554321                   1355


Q ss_pred             EEEecCCCchHHHHHHHH----cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGLI----GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~l----g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+....+-+..    .|..+..+..     .|+++++++|++.      +.+|.+..+++++..+-||++|++
T Consensus        89 ~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~-----~~~~~~~~ai~~~------t~li~~EtpsNP~l~v~Di~~i~~  157 (380)
T d1ibja_          89 EIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT-----TKLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISE  157 (380)
T ss_dssp             EEEEESSCCHHHHHHHHHTSGGGTCEEEEECT-----TSHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHH
T ss_pred             EEEEEecccccccchhhhhhccccccccccCc-----chHHHHHHHhccC------ccEEEeccccccccccccHHHHHH
Confidence            788999999888877642    3566666654     3788898888554      448999999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|+++|+++.||..++.+...-|    +..|   ||-+.-|..|++..-
T Consensus       158 iA~~~g~~~vVDnT~atP~~~~P----l~~G---aDiVvhS~TKyi~Gh  199 (380)
T d1ibja_         158 MAHAQGALVLVDNSIMSPVLSRP----LELG---ADIVMHSATKFIAGH  199 (380)
T ss_dssp             HHHTTTCEEEEECTTTCTTTCCG----GGTT---CSEEEEETTTTTTCS
T ss_pred             HHHHcCCeEEeeccccccccccc----cccC---CCEEEecccceeccc
Confidence            99999999999999988765443    2223   799999999998754

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=98.57  E-value=1e-08  Score=97.06  Aligned_cols=154  Identities=10%  Similarity=-0.134  Sum_probs=101.3

Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCc
Q psy1596         163 SSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSR  242 (375)
Q Consensus       163 e~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~  242 (375)
                      -+++++.|+++||.+                    +....+|++|++.++..++.....                  .++
T Consensus        50 ~~~~r~~l~~l~~~~--------------------~~~~i~~~~gs~t~~~ea~~~~l~------------------~~~   91 (361)
T d2c0ra1          50 HNEAQARLLALLGNP--------------------TGYKVLFIQGGASTQFAMIPMNFL------------------KEG   91 (361)
T ss_dssp             HHHHHHHHHHHTTCC--------------------SSEEEEEESSHHHHHHHHHHHHHC------------------CTT
T ss_pred             HHHHHHHHHHHhCCC--------------------CCCEEEEECCCchHHHHHHHhccc------------------cCC
Confidence            378999999999998                    334578888888887766543221                  012


Q ss_pred             eEEEecCCCchHHHHH---HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         243 LVAYCSDQAHSSVEKA---GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       243 ~vV~~S~~aH~Sv~ka---a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .+++.-.. +....+.   +...+..+..++.+.....+++.+++.+...      . ++.   .++.||.+-++.+|.+
T Consensus        92 ~~~l~~~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~---v~~~tg~~~~~~~i~~  160 (361)
T d2c0ra1          92 QTANYVMT-GSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQD------N-AAY---LHLTSNETIEGAQFKA  160 (361)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCT------T-EEE---EEEESEETTTTEECSS
T ss_pred             CceEEEee-chhhhhhhhhhhhcCceeeeeccccccccchhhhhhhcccC------c-ceE---EEEecccceecceEEE
Confidence            23332222 2222333   2345677788887777778888777665433      1 222   2356778888889999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +|+++|+.++|||+.+.+....+.        +..|...++.||.++.|-+.++
T Consensus       161 ~~~~~~al~~vDavss~g~~~id~--------~~~di~~~s~~k~~~~~~~~~~  206 (361)
T d2c0ra1         161 FPDTGSVPLIGDMSSDILSRPFDL--------NQFGLVYAGAQKNLGPSGVTVV  206 (361)
T ss_dssp             CCCCTTSCEEEECTTTTTSSCCCG--------GGCSEEEEETTTTTCCSSCEEE
T ss_pred             eeccCCceEEEEeecccccccccc--------ccceeEEEecccccccccCcEE
Confidence            999999999999999998764432        2236666778998876655443

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=98.53  E-value=7.2e-09  Score=97.54  Aligned_cols=149  Identities=7%  Similarity=-0.193  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +++++.|+++||.|                    +....+|++|+++++..+......                  .++.
T Consensus        51 ~~~r~~l~~l~~~~--------------------~~~~i~~~~gt~~~~~~~~~~~~~------------------~~~~   92 (360)
T d1w23a_          51 EQAQNLLRELLQIP--------------------NDYQILFLQGGASLQFTMLPMNLL------------------TKGT   92 (360)
T ss_dssp             HHHHHHHHHHHTCC--------------------TTEEEEEESSHHHHHHHHHHHHHC------------------CTTC
T ss_pred             HHHHHHHHHHhCCC--------------------CCCEEEEeCCcHHHHHHHHHhhhc------------------ccCc
Confidence            78999999999998                    334578888887776655443221                  1223


Q ss_pred             EEEecCCCchHHHHHHH--HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL--IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC  321 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~--lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia  321 (375)
                      ++++....|.+..-+-.  ..+...+.+..........+.+++.+..          +..+..+|.+|.+-|+++|+++|
T Consensus        93 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~tg~~~~~~~i~~~~  162 (360)
T d1w23a_          93 IGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQLN----------ENDAYLHITSNNTIYGTQYQNFP  162 (360)
T ss_dssp             EEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCCC----------TTEEEEEEESEETTTTEECSSCC
T ss_pred             ccceeeccchhhhhHHHHHHhhhcceeeccccccccchhhhhhcccc----------cccceeEecCCccccceeeeecc
Confidence            44444343333333322  2343333333322222233333222211          12234456789999999999999


Q ss_pred             HhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCC
Q psy1596         322 EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLM  366 (375)
Q Consensus       322 ~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~  366 (375)
                      +++|+.++|||+++.+....+- +.    + .+|.++++.||++.
T Consensus       163 ~~~g~l~ivDavqs~g~~~id~-~~----~-~vd~~~~~~~k~~~  201 (360)
T d1w23a_         163 EINHAPLIADMSSDILSRPLKV-NQ----F-GMIYAGAQKNLGPS  201 (360)
T ss_dssp             CCCSSCEEEECTTTTTSSCCCG-GG----C-SEEEEETTTTTSCT
T ss_pred             ccceeeEEeecccccccccccc-cc----c-cceEEeeccccccC
Confidence            9999999999999998764432 21    2 46999999888754

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=98.53  E-value=1.5e-06  Score=84.03  Aligned_cols=145  Identities=11%  Similarity=0.080  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++-|-+                       ..+.+++|..|+..++.+...                   ++.
T Consensus        53 ~~le~~la~LEgg~-----------------------~a~~~sSGMaAi~~~l~~l~~-------------------~gd   90 (384)
T d1cs1a_          53 DVVQRALAELEGGA-----------------------GAVLTNTGMSAIHLVTTVFLK-------------------PGD   90 (384)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------ceEEecChHHHHHHHHhhccc-------------------ccc
Confidence            67788888886543                       478899998888777765422                   356


Q ss_pred             EEEecCCCchHHHHHHH--H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL--I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~--l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+....+-..  +  ++..+..+..     .|.+++++++.+.++      +|.+-.++|++..+-||++|++
T Consensus        91 ~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~-----~d~~~~~~~~~~~t~------~v~~EspsNP~l~v~Di~~i~~  159 (384)
T d1cs1a_          91 LLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ-----GDEQALRAALAEKPK------LVLVESPSNPLLRVVDIAKICH  159 (384)
T ss_dssp             EEEEETTCCHHHHHHHHHHHTTTSCEEEEECT-----TCHHHHHHHHHTCCS------EEEEECSCTTTCCCCCHHHHHH
T ss_pred             eecccccccchhhhhhhhhhcccccccccccC-----CCHHHHHhhcccccc------EEEEeccccccceeccHHHHhh
Confidence            88899888877766552  2  4556665543     488999999887643      8999999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVH  368 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P  368 (375)
                      +|+++|+.+.||..++.+.+.-|    +..|   ||-+.-|.-|++..-
T Consensus       160 ia~~~g~~~vVDNT~atP~~~~P----l~~G---aDiVvhS~TKyi~Gh  201 (384)
T d1cs1a_         160 LAREVGAVSVVDNTFLSPALQNP----LALG---ADLVLHSCTKYLNGH  201 (384)
T ss_dssp             HHHHTTCEEEEECTTTCTTTCCG----GGGT---CSEEEEETTTTTTCS
T ss_pred             hhhhcCcEEEEeccccCcccccc----cccC---CCEEEEccccccccC
Confidence            99999999999999988765443    2234   799999999998643

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=98.52  E-value=4.3e-07  Score=89.36  Aligned_cols=159  Identities=9%  Similarity=-0.048  Sum_probs=111.5

Q ss_pred             hhcchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcc
Q psy1596         155 VILDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPEL  234 (375)
Q Consensus       155 ~~~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~  234 (375)
                      .-.|+.++-.+...||+++.|++.-                      -.-.-.|..|...|++.++...           
T Consensus       102 ~sQG~Lq~l~e~q~~l~eltGmd~~----------------------n~s~~~ga~a~~~~~~~~~~~~-----------  148 (437)
T d1wyua1         102 VSQGVLQATFEYQTMIAELAGLEIA----------------------NASMYDGATALAEGVLLALRET-----------  148 (437)
T ss_dssp             GCHHHHHHHHHHHHHHHHHHTSSEE----------------------CSCBSSHHHHHHHHHHHHHHHH-----------
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCcc----------------------ccCchHHHHHHHHHHHHHHhhh-----------
Confidence            3478888888999999999999820                      0112356778888888876542           


Q ss_pred             hhhhhcCceEEEecCCCchHHHHH----HHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccc
Q psy1596         235 EHAEINSRLVAYCSDQAHSSVEKA----GLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACA  310 (375)
Q Consensus       235 ~~~~~~~~~vV~~S~~aH~Sv~ka----a~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGa  310 (375)
                            ++-.++++...|.+....    +...|.+++.||.++.+ .+.++    +.++      .++|++|.++| .|.
T Consensus       149 ------~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v~~~~~~-~~~~~----~~~~------~Aavmi~~Pnt-~G~  210 (437)
T d1wyua1         149 ------GRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGR-TPLPE----VGEE------VGAVVVQNPNF-LGA  210 (437)
T ss_dssp             ------TCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTB-CCCCC----CCTT------EEEEEEESSCT-TSB
T ss_pred             ------cccccccccccChHHhhhhhhhcccceeeEEeeeccccc-chhhh----hccc------eeEEEEccccc-ccc
Confidence                  122577889999776443    24578899999986544 33222    2222      56899999966 699


Q ss_pred             cccHHHHHHHHHhcCCEEEEecccccCccc-chhhhhhhcCCCcccEEEEcCcccCCCCCcce
Q psy1596         311 FDNLEELGPICEKEGLWLHVDAAYAGSSFI-CPEFRKWLAGVEYANSIAFNPSKWLMVHFDCT  372 (375)
Q Consensus       311 vDpl~eI~~ia~~~~iwlHVDaA~gg~~~~-~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g  372 (375)
                      +.++++|++++++.|..+.+|+.--+-..+ .|.  .  -   .||.++.+ ||.+++|.+.|
T Consensus       211 ~ed~~~i~~~~h~~G~l~~~~ad~~al~~l~~Pg--~--~---GaDi~~g~-~q~fg~p~g~G  265 (437)
T d1wyua1         211 LEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPG--A--Y---GADIAVGD-GQSLGLPMGFG  265 (437)
T ss_dssp             CCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHH--H--H---TCSEEEEE-CTTTTCCCGGG
T ss_pred             ccchHHHHHHhhhccceEEeeechhhhhcccccc--c--c---ccceEeec-cceeccccCCC
Confidence            999999999999999988888754322222 221  1  1   36999999 88889999886

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=98.42  E-value=8.6e-06  Score=78.92  Aligned_cols=148  Identities=13%  Similarity=0.053  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++-|-.                       ..+++++|..|+..++.+...                   ++.
T Consensus        70 ~~LE~~la~LEgg~-----------------------~a~~~sSGMaAi~~~l~~l~~-------------------~Gd  107 (398)
T d1qgna_          70 VVLEEKISALEGAE-----------------------STLLMASGMCASTVMLLALVP-------------------AGG  107 (398)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESCHHHHHHHHHHHHSC-------------------SSC
T ss_pred             HHHHHHHHHHhCCc-----------------------eEEEecCcchHHHHHHhhccc-------------------ccc
Confidence            67788888886543                       468999999988887765321                   456


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+....+-+.    -.+..+..+..     .|.++.++.+...     .+.+|.+-.+++++..+-||++|++
T Consensus       108 ~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~-----~~~~~~~~~~~~~-----~t~~v~~EspsNP~l~v~Di~~ia~  177 (398)
T d1qgna_         108 HIVTTTDCYRKTRIFIETILPKMGITATVIDP-----ADVGALELALNQK-----KVNLFFTESPTNPFLRCVDIELVSK  177 (398)
T ss_dssp             EEEEETTSCHHHHHHHHHTGGGGTCEEEEECS-----SCHHHHHHHHHHS-----CEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             cccccccccchhhhhhcccccccccccccccc-----cchhhhhhhhccc-----cceEEEccCccccccccchHHHHHH
Confidence            78899988877776653    24566666653     2445455443321     1448889999999999999999999


Q ss_pred             HHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCc
Q psy1596         320 ICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFD  370 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~  370 (375)
                      +|+++|+.++||..++.....-|    +-.|   ||-+.-|.-|++..--+
T Consensus       178 ia~~~g~~~vVDnT~atP~~~~P----l~~G---aDiVihS~TKy~~Ghsd  221 (398)
T d1qgna_         178 LCHEKGALVCIDGTFATPLNQKA----LALG---ADLVLHSATKFLGGHND  221 (398)
T ss_dssp             HHHHTTCEEEEECTTTCTTTCCT----TTTT---CSEEEECTTTTTTCSSS
T ss_pred             HHhhcCCEEEecceeeccccCCc----hhhC---CCEEEEechhhcCcccc
Confidence            99999999999999988765433    1123   79999999999876543

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=2.1e-08  Score=93.49  Aligned_cols=158  Identities=9%  Similarity=-0.146  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      +-+++++.|+++||.+                    +....+|++|+++++..+......                  .+
T Consensus        47 l~~~~r~~l~~l~~~~--------------------~~~~v~~~~gs~t~~~~a~~~~~~------------------~~   88 (360)
T d1bjna_          47 VAEEAEKDFRDLLNVP--------------------SNYKVLFCHGGGRGQFAAVPLNIL------------------GD   88 (360)
T ss_dssp             HHHHHHHHHHHHHTCC--------------------TTEEEEEESSHHHHHHHHHHHHHC------------------TT
T ss_pred             HHHHHHHHHHHHhCCC--------------------CCCEEEEECCchHHHHhhhhhccc------------------cc
Confidence            3378999999999998                    334678999999887766543221                  12


Q ss_pred             ceEEEecCCCchHHHHHHH---HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHH
Q psy1596         242 RLVAYCSDQAHSSVEKAGL---IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELG  318 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~---lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~  318 (375)
                      +.++++.. .|........   ..+..++.+..+.+...+.+.+++.+...      +.+++++..+|.||...++.++.
T Consensus        89 ~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~v~~~~~~t~~~~~~~~i~  161 (360)
T d1bjna_          89 KTTADYVD-AGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLS------DNAAYMHYCPNETIDGIAIDETP  161 (360)
T ss_dssp             CCEEEEEE-SSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCCCC------SSCSCEEECSEETTTTEECCCCC
T ss_pred             ccccceec-ccchhhhhHHHHhhcCccceeeccccCCCcchhhhhhhhccC------CceeEEEecccccccCcccccee
Confidence            33455543 3344444333   23445555554444555555555444332      23566667788899988887764


Q ss_pred             HHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCcceee
Q psy1596         319 PICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTAM  374 (375)
Q Consensus       319 ~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~l  374 (375)
                        ++.+++.+++|++.+.+..-.+.        ..+|...++.||+++.|.+.+++
T Consensus       162 --~~~~~~~v~vDa~~~~~~~~vd~--------~~~dv~~~ss~k~~~~~~~~~~~  207 (360)
T d1bjna_         162 --DFGADVVVAADFSSTILSRPIDV--------SRYGVIYAGAQKNIGPAGLTIVI  207 (360)
T ss_dssp             --CCCTTCCEEEECTTTTTSSCCCG--------GGCSEEEEETTTTTSSTTCEEEE
T ss_pred             --cccccceeeeeeeccccceeeee--------ccceeEEEEcccccccCCCceeE
Confidence              56678999999999887653321        23599999999999999888875

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=98.36  E-value=6.5e-06  Score=81.47  Aligned_cols=172  Identities=15%  Similarity=0.080  Sum_probs=117.9

Q ss_pred             cchhHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchh
Q psy1596         157 LDRDKYSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEH  236 (375)
Q Consensus       157 ~g~~~le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~  236 (375)
                      .|+.+.--+...++++|.|++..                      -.-.-.|..|...|+++++.....+.+.       
T Consensus       102 QG~LQalfEfQtmi~eLTGMdva----------------------NaS~yDGatA~aeA~~ma~r~~~~~~~~-------  152 (471)
T d1wyub1         102 QGALRLMWELGEYLKALTGMDAI----------------------TLEPAAGAHGELTGILIIRAYHEDRGEG-------  152 (471)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSEE----------------------ECCCSSHHHHHHHHHHHHHHHHHHTTCT-------
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcc----------------------ccccchHHHHHHHHHHHHHHHhhhcccc-------
Confidence            56666667888999999999820                      0112245566677777766543221110       


Q ss_pred             hhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHH
Q psy1596         237 AEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEE  316 (375)
Q Consensus       237 ~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~e  316 (375)
                         ....+++.+...|..........+..++.++.++.+..|.+.++..+..+      ...++++.+++..+..+++++
T Consensus       153 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~a~v~v~~p~~~g~~e~~~~~  223 (471)
T d1wyub1         153 ---RTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELGPH------VAALMLTNPNTLGLFERRILE  223 (471)
T ss_dssp             ---TTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTT------EEEEEECSSCTTSCCCTTHHH
T ss_pred             ---cccccccCCcccccceeeeeecccceeecccccccccccchhhhhhhhcc------ccceeeccCCCcccccchhhh
Confidence               11234555666666666666677788899998888999999998876554      347778877666655677999


Q ss_pred             HHHHHHhcCCEEEEecccccCcc--cchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         317 LGPICEKEGLWLHVDAAYAGSSF--ICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       317 I~~ia~~~~iwlHVDaA~gg~~~--~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      +++++++.+.-+++|++-....+  ..|.  .     ..+|-++++.|+.+++|++.|.
T Consensus       224 ~~~~~h~~g~~~~~~~~~~~~~~~l~~p~--~-----~g~div~vg~~q~~G~P~~~GG  275 (471)
T d1wyub1         224 ISRLCKEAGVQLYYDGANLNAIMGWARPG--D-----MGFDVVHLNLHKTFTVPHGGGG  275 (471)
T ss_dssp             HHHHHHHHTCEEEEEGGGGGGTTTTCCHH--H-----HTCSEEECCTTTTTCCCCTTSC
T ss_pred             hHHHHHhccccccccccchhhhhhccccC--c-----cccccccccccccccccccccc
Confidence            99999999999999987544332  2221  1     1369999999999999987764

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=98.33  E-value=8.9e-06  Score=79.33  Aligned_cols=147  Identities=12%  Similarity=0.077  Sum_probs=107.1

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++=|-.                       .++.+++|..|+..++++...                   ++.
T Consensus        61 ~~LE~~la~LE~~~-----------------------~a~~~~SGmaAi~~~~~~l~~-------------------~gd   98 (421)
T d2ctza1          61 DVLEKRLAALEGGK-----------------------AALATASGHAAQFLALTTLAQ-------------------AGD   98 (421)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCC-----------------------eEEEecChHHHHHHHHHhhcc-------------------ccc
Confidence            67778888885543                       478889998887666655422                   356


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+....+-+.    -.++.+..+..+    -+.+..++.+++.      +.+|.+-.+++++..+-||++|++
T Consensus        99 ~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~----~~~~~~~~~~~~~------t~li~~EtpsNP~l~v~Di~~i~~  168 (421)
T d2ctza1          99 NIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE----ERPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQ  168 (421)
T ss_dssp             EEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT----CCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             ceeecCCcCCchhHHHHHHHhhccccceecccc----cCcchhccccCCC------ceEEEEcCCCcceeEecchHHHHH
Confidence            89999999877766553    246666665432    1345555555544      448999999999999999999999


Q ss_pred             HHHhcCCEEEEeccccc-CcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKEGLWLHVDAAYAG-SSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~~iwlHVDaA~gg-~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++|+.+.||..++. ..+.-|    +..|   ||.+.-|..|++..--
T Consensus       169 iA~~~g~~~vvDnT~a~tP~~~~P----l~~G---aDiVvhS~TKyl~GHs  212 (421)
T d2ctza1         169 AAREKGVALIVDNTFGMGGYLLRP----LAWG---AALVTHSLTKWVGGHG  212 (421)
T ss_dssp             HHHHHTCEEEEECGGGGGGTSCCG----GGGT---CSEEEEETTTTTTCSS
T ss_pred             HHHhcCCceEecccccccceeccc----cccC---CcEEEEechhhccCCC
Confidence            99999999999999984 433323    2334   6999999999987543

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=98.30  E-value=2.2e-05  Score=73.08  Aligned_cols=136  Identities=14%  Similarity=-0.077  Sum_probs=90.5

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG  279 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~  279 (375)
                      ...++|+|+++++...+.+                       ...|++.+.++..+...+.+.|.+++.||.++++..+-
T Consensus        77 d~I~it~G~~~~l~~l~~~-----------------------~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~  133 (334)
T d2f8ja1          77 NNVSVGNGADEIIYVMMLM-----------------------FDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPE  133 (334)
T ss_dssp             GGEEEEEHHHHHHHHHHHH-----------------------SSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSCCCC
T ss_pred             ceEEecCcchhHHHHHhhh-----------------------ccccccccccccccccchhccCCccccccccccccccc
Confidence            3578888888876543321                       12577888899998888888889999999987765541


Q ss_pred             HHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEE
Q psy1596         280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF  359 (375)
Q Consensus       280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~  359 (375)
                      .        ..   ..+.+++.+.+++++|.+-+.++|.+++ ++++++++|.+|...........  ...- .--.++.
T Consensus       134 ~--------~~---~~~~~l~l~nP~NPtG~~~s~~~l~~~~-~~~~~ii~Dd~~~~~~~~~~~~~--~~~~-~~~i~~~  198 (334)
T d2f8ja1         134 V--------NV---GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDF--LKKY-ENLAVIR  198 (334)
T ss_dssp             C--------CC---CTTEEEEEESSCTTTCCCCCHHHHHHHH-TTTCEEEEECTTGGGTCCCCGGG--GGTC-SSEEEEE
T ss_pred             c--------cc---ccceEEEecccccccceeecHHHhhccc-cceeEEeecccchhhcccccccc--cccC-ceEEEEe
Confidence            1        11   1234677788999999999988887764 57899999998865432211111  1111 1134677


Q ss_pred             cCcccCCCC-Cccee
Q psy1596         360 NPSKWLMVH-FDCTA  373 (375)
Q Consensus       360 d~HK~l~~P-~~~g~  373 (375)
                      ++.|.++.| .-+|.
T Consensus       199 S~SK~~~~~G~R~G~  213 (334)
T d2f8ja1         199 TFSKAFSLAAQRVGY  213 (334)
T ss_dssp             ESTTTSSCTTTCEEE
T ss_pred             cCccccchhhhhhhh
Confidence            899986655 44443

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=98.19  E-value=3.4e-06  Score=79.90  Aligned_cols=131  Identities=9%  Similarity=0.043  Sum_probs=100.1

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHH----HcCCeEEEEecCCCCC
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLS  276 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~  276 (375)
                      .++.+++|..|+..++++...                   ++..|++++..+....+-+.    -.|+++..++.+    
T Consensus        15 ~a~~~sSGMaAi~~~l~~ll~-------------------~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~~----   71 (331)
T d1pffa_          15 ACAATASGMGAIAASVWTFLK-------------------AGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMA----   71 (331)
T ss_dssp             EEEEESSHHHHHHHHHHHHCC-------------------TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT----
T ss_pred             eEEEECCHHHHHHHHHHHHhC-------------------CCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEeccc----
Confidence            478899999998777765432                   34578888888876665542    257788887654    


Q ss_pred             cCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHH-HhcCCEEEEecccccCcccchhhhhhhcCCCccc
Q psy1596         277 LRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPIC-EKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYAN  355 (375)
Q Consensus       277 md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia-~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aD  355 (375)
                       |.+.+++++++.      +.+|....+++++..+.|++++++++ +++|+.+.||-.++.+...-|    +..|   ||
T Consensus        72 -d~~~~~~~i~~~------t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~~~p----l~~G---aD  137 (331)
T d1pffa_          72 -VPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNP----LDLG---VD  137 (331)
T ss_dssp             -STTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCG----GGGT---CS
T ss_pred             -chhhHhhhcccc------cceeeeecccccccccccchhhhhhhhcccCceEEeeccccccccccc----cccC---CC
Confidence             778888888654      44888999999999999999999985 568999999999988654433    2223   79


Q ss_pred             EEEEcCcccCCCC
Q psy1596         356 SIAFNPSKWLMVH  368 (375)
Q Consensus       356 Si~~d~HK~l~~P  368 (375)
                      .+.-|.-|++..-
T Consensus       138 iVv~S~TKy~~Gh  150 (331)
T d1pffa_         138 IVVHSATKYINGH  150 (331)
T ss_dssp             EEEEETTTTTSSS
T ss_pred             EEEecchhhcCCC
Confidence            9999999998653

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=98.16  E-value=5.7e-06  Score=80.05  Aligned_cols=146  Identities=8%  Similarity=0.028  Sum_probs=111.4

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|+++=|-.                       .++.+++|..|+..++++...                   ++.
T Consensus        61 ~~le~~la~LEg~~-----------------------~a~~~~SGMaAi~~~l~~l~~-------------------~Gd   98 (391)
T d1cl1a_          61 FSLQQAMCELEGGA-----------------------GCVLFPCGAAAVANSILAFIE-------------------QGD   98 (391)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCc-----------------------cEEEeccccceeeehhhcccC-------------------CCC
Confidence            67788888885543                       478899998888888765432                   345


Q ss_pred             EEEecCCCchHHHHHHH--H--cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL--I--GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~--l--g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...+....+-+.  +  .|+++..+..+     |.+++++++++.+      .+|.+-.+++++..+-||++|++
T Consensus        99 ~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~~-----d~~~~~~~i~~~t------~~i~~EtpsNP~l~v~Di~~i~~  167 (391)
T d1cl1a_          99 HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQPNT------KIVFLESPGSITMEVHDVPAIVA  167 (391)
T ss_dssp             EEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-----CGGGGGGTCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred             eEEEecccccchhhhhhhcccccccccccccCc-----ccccccccccccc------ceeeecccCcccccccccHHHHH
Confidence            78999999988777663  2  35677766543     6677887776543      48899999999999999999999


Q ss_pred             HHHhc--CCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEKE--GLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~~--~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+++  |+.+.||..++.+...-|    +-.|   ||-+.-|.-|++..--
T Consensus       168 ~a~~~~~g~~~vVDnT~atP~~~~P----l~~G---aDivvhS~TKy~~Ghs  212 (391)
T d1cl1a_         168 AVRSVVPDAIIMIDNTWAAGVLFKA----LDFG---IDVSIQAATKYLVGHS  212 (391)
T ss_dssp             HHHHHCTTCEEEEECTTTTTTSSCG----GGGT---CSEEEEETTTTTTCSS
T ss_pred             HHHhccCCcEEEEeccccchhhhcc----cccc---cceEEeecchhccccc
Confidence            99774  999999999988765433    2224   6999999999987543

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=98.06  E-value=6.7e-05  Score=72.35  Aligned_cols=146  Identities=9%  Similarity=0.037  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.|++|-|-+                       ..+.+++|..|+..++++...                   ++.
T Consensus        62 ~~le~~la~LEg~~-----------------------~a~~~sSGmaAi~~~~l~l~~-------------------~gd   99 (394)
T d1e5ea_          62 SNLEGKIAFLEKTE-----------------------ACVATSSGMGAIAATVLTILK-------------------AGD   99 (394)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred             HHHHHHHHHHhCCc-----------------------ceeeeccchHHHHHHHHhhcc-------------------ccc
Confidence            67778888886544                       468889998888877765422                   356


Q ss_pred             EEEecCCCchHHHHHHH----HcCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL----IGLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~----lg~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|++++..+....+-..    -.++.+..+..+     |+++++++|++.+      .+|.+..+++++..+-|++++++
T Consensus       100 ~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~~-----d~~~~~~~i~~~t------~lv~~Etp~NP~l~v~Di~~~~~  168 (394)
T d1e5ea_         100 HLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IPGEVKKHMKPNT------KIVYFETPANPTLKIIDMERVCK  168 (394)
T ss_dssp             EEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCCTTE------EEEEEESSCTTTCCCCCHHHHHH
T ss_pred             ccccccceeehhhHhHHHHhhccceeeeccCCC-----CHHHHHHhhcccc------cEEEEeccCCcceeeehhhhhhh
Confidence            88899998877766542    257788888754     6678899887654      38899999999999999999998


Q ss_pred             HHHh-cCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICEK-EGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~~-~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      ++++ +|+.+.||..++...+.-|    +-.|   ||-+.-|.-|++..--
T Consensus       169 ~~~~~~g~~vvvDnT~atP~~~~P----l~~G---aDiVvhS~TKy~~Ghs  212 (394)
T d1e5ea_         169 DAHSQEGVLVIADNTFCSPMITNP----VDFG---VDVVVHSATKYINGHT  212 (394)
T ss_dssp             HHHTSTTCEEEEECTTTCTTTCCG----GGGT---CSEEEEETTTTTTCSS
T ss_pred             ccccccCeEEEecCcccCcccCCc----hhcC---CCEEEechhhhcCCCc
Confidence            7765 6899999999988765443    2224   6999999999987543

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=98.06  E-value=3.6e-05  Score=74.68  Aligned_cols=143  Identities=12%  Similarity=-0.055  Sum_probs=86.6

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHH--------HHc----------
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAG--------LIG----------  262 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa--------~lg----------  262 (375)
                      ...|+.+||+||-.|+..||....                ++.+|-....-|-...-++        .++          
T Consensus       110 ~v~f~~sGseA~e~Alk~ar~~t~----------------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~  173 (427)
T d2gsaa_         110 MVRFVNSGTEACMAVLRLMRAYTG----------------RDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKK  173 (427)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHC----------------CCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHH
T ss_pred             cccccCCcHHHHHHHHHHHHHhcC----------------CCeEEEEecccccCcceeeeecCCcccccCCCCCCCCccc
Confidence            468999999999999999987531                1112333333332211110        111          


Q ss_pred             -CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccC
Q psy1596         263 -LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGS  337 (375)
Q Consensus       263 -~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~  337 (375)
                       ......+|.     -|+++||+++++...   ...+|++.--....|.+-+    +++|.++|++||+.|++|.++.|.
T Consensus       174 ~~~~~~~~~~-----~~~~~le~~~~~~~~---~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~  245 (427)
T d2gsaa_         174 TTANTLTTPY-----NDLEAVKALFAENPG---EIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF  245 (427)
T ss_dssp             HHTTEEEECT-----TCHHHHHHHHTTSTT---TEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT
T ss_pred             CccceeccCc-----chHHHHHHHHHhCCC---CeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccc
Confidence             012333332     389999999975322   2445555443344577766    999999999999999999999875


Q ss_pred             cccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         338 SFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       338 ~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                       .....+.....|+ ..|-+++.=--.++.|.
T Consensus       246 -r~g~~~~~~~~gi-~PDi~~~gK~lggG~p~  275 (427)
T d2gsaa_         246 -RIAYGGVQEKFGV-TPDLTTLGKIIGGGLPV  275 (427)
T ss_dssp             -TTBTTCHHHHTTC-CCSEEEECGGGGTTSCC
T ss_pred             -eecccchHHhcCC-CHHHHhhhhccCCCcce
Confidence             2222222223355 46888887655555555

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.04  E-value=1.3e-05  Score=77.56  Aligned_cols=144  Identities=13%  Similarity=0.107  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      +.+.+.|++|-|-.                       .++.+++|..|+. +++...                   .++.
T Consensus        58 ~~lE~~la~LE~~~-----------------------~a~~~sSGmaAi~-~~l~~l-------------------~~gd   94 (393)
T d1n8pa_          58 ENLERAVAALENAQ-----------------------YGLAFSSGSATTA-TILQSL-------------------PQGS   94 (393)
T ss_dssp             HHHHHHHHHHTTCS-----------------------EEEEESCHHHHHH-HHHHTS-------------------CSSC
T ss_pred             HHHHHHHHHHhCCc-----------------------eEEEecCchhHHH-hhhhcc-------------------cCCC
Confidence            67788888885543                       4688888855543 333321                   1244


Q ss_pred             EEEecCCCchHHHHHHH-H---cCCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHH
Q psy1596         244 VAYCSDQAHSSVEKAGL-I---GLVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGP  319 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~-l---g~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~  319 (375)
                      .|+++...+.....-+. +   .+..+..+.      .+.++++++++++      ..+|.+-.++|++..+-||++|++
T Consensus        95 ~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~------~~~~~~~~~i~~~------t~lv~~EspsNP~l~v~Di~~ia~  162 (393)
T d1n8pa_          95 HAVSIGDVYGGTHRYFTKVANAHGVETSFTN------DLLNDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVAD  162 (393)
T ss_dssp             EEEEESSCCHHHHHHHHHTSTTTCSCCEEES------SHHHHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHH
T ss_pred             eeeeeeeecccchhhhhhhhhcccceeEEee------cchHHHHHHhhhh------cceeEecCcchhhhhccchhhhhh
Confidence            67788888777766653 2   355555553      2457888888654      348999999999999999999999


Q ss_pred             HHH----hcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         320 ICE----KEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       320 ia~----~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      +|+    ++|+.+.||..++.....-|    +..|   ||-+.-|.-|++..--
T Consensus       163 ~a~~~~~~~g~~lvVDnT~atP~~~~P----l~~G---ADiVvhS~TKyi~Ghs  209 (393)
T d1n8pa_         163 LIKKHAAGQDVILVVDNTFLSPYISNP----LNFG---ADIVVHSATKYINGHS  209 (393)
T ss_dssp             HHHHHTTTTTCEEEEECTTTHHHHCCG----GGGT---CSEEEEETTTTTTCSS
T ss_pred             hhhhhcccCCceEEEecCccCcccCCc----hhhC---CCEEEEccccccCCCC
Confidence            999    67899999999988754333    2223   7999999999987543

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=98.02  E-value=3.5e-05  Score=73.91  Aligned_cols=132  Identities=11%  Similarity=0.045  Sum_probs=83.6

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC------------CeEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL------------VKMRY  268 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~------------~~v~~  268 (375)
                      ...|+.+|||||-.|+..||....                ++.++.....-|-...-+..+.+            ..+..
T Consensus        98 ~v~f~~sGseA~e~Aik~Ar~~t~----------------r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~  161 (387)
T d1vefa1          98 RVFPVNSGTEANEAALKFARAHTG----------------RKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEF  161 (387)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHS----------------CCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEE
T ss_pred             eeccccCchHHHHHHHHHHHhhcc----------------cceecccccCCCCCccceEeccCCccccCCCCCCCCCceE
Confidence            478999999999999999987531                12234444444544433333221            24556


Q ss_pred             EecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchhh
Q psy1596         269 IESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPEF  344 (375)
Q Consensus       269 Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~  344 (375)
                      +|-+     |.+.|++.++++      ..+|++.--....|.+-+    +++|.++|++||+.|++|..+.|....-..+
T Consensus       162 ~p~~-----d~~~l~~~~~~~------iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~  230 (387)
T d1vefa1         162 IPYN-----DVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF  230 (387)
T ss_dssp             ECTT-----CHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS
T ss_pred             eCCC-----CHHHHHHhcCCC------eEEEEEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCc
Confidence            6653     788999888654      334444322233455544    9999999999999999999998764332211


Q ss_pred             hhhhcCCCcccEEEEc
Q psy1596         345 RKWLAGVEYANSIAFN  360 (375)
Q Consensus       345 ~~~~~gie~aDSi~~d  360 (375)
                      .....++ ..|.+++.
T Consensus       231 ~~~~~~v-~PDi~~~g  245 (387)
T d1vefa1         231 AFEHFGI-VPDILTLA  245 (387)
T ss_dssp             THHHHTC-CCSEEEEC
T ss_pred             ccccCCc-CCceeeec
Confidence            2222355 47888876

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=0.00012  Score=70.47  Aligned_cols=155  Identities=9%  Similarity=-0.032  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCce
Q psy1596         164 SKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRL  243 (375)
Q Consensus       164 ~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~  243 (375)
                      ..+.+.+.++.+.+                       ...|+.+||+||-.|+..||.......... .       .+..
T Consensus        86 ~~~~~~~~~~~~~~-----------------------~v~~~~sGseA~e~Aik~ar~~~~~~~~~~-~-------~~~~  134 (404)
T d2byla1          86 GEYEEYITKLFNYH-----------------------KVLPMNTGVEAGETACKLARKWGYTVKGIQ-K-------YKAK  134 (404)
T ss_dssp             HHHHHHHHHHHTCS-----------------------EEEEESSHHHHHHHHHHHHHHHHHHTTCCC-T-------TCCE
T ss_pred             HHHHHhhhhccccc-----------------------ccccccCccccchhHHHHHHHHhhhccccc-c-------cccc
Confidence            45667777776654                       368999999999999999997643211000 0       1123


Q ss_pred             EEEecCCCchHHHHHHHHc------------CCeEEEEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc
Q psy1596         244 VAYCSDQAHSSVEKAGLIG------------LVKMRYIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF  311 (375)
Q Consensus       244 vV~~S~~aH~Sv~kaa~lg------------~~~v~~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav  311 (375)
                      ++.....-|....-+....            ...+..+|.+     |.++|+++++..     ...+|++--.....|.+
T Consensus       135 i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p~~-----d~~~l~~~l~~~-----~iAaviiEPi~g~~G~~  204 (404)
T d2byla1         135 IVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQDP-----NVAAFMVEPIQGEAGVV  204 (404)
T ss_dssp             EEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEECTT-----CHHHHHHHHTST-----TEEEEEECSSBTTTTSB
T ss_pred             ccccCCCccccccceeccCCCcccccCCCCCCCCeeEeccc-----CHHHHHHhcCCC-----CeEEEEECCccCCCCCc
Confidence            4555556664444433211            1235566654     789999998542     13344443223334544


Q ss_pred             cc----HHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEc
Q psy1596         312 DN----LEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFN  360 (375)
Q Consensus       312 Dp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d  360 (375)
                      -+    +++|.++|++||+.+++|..+.|......-+.....|+ ..|.+++.
T Consensus       205 ~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv-~PDi~~~g  256 (404)
T d2byla1         205 VPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENV-RPDIVLLG  256 (404)
T ss_dssp             CCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC
T ss_pred             cCCHHHHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCC-CCCEEEEC
Confidence            33    99999999999999999999987644333333334466 36888764

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=0.00011  Score=71.14  Aligned_cols=172  Identities=12%  Similarity=0.004  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCchhhHHHHhcCCCCCCcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcC
Q psy1596         162 YSSKVLDFVSKENATPTKDPTPSLDKELLVIFGFLRPPNFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINS  241 (375)
Q Consensus       162 le~~v~~wLa~llG~p~~~~~~~~~~~~~~~~g~~~~~~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~  241 (375)
                      .+.++.+.|.+++.-.                    ......|+++||||+-.|+..||....                +
T Consensus        84 ~~~~la~~l~~~~p~~--------------------~~~~v~f~~sGseA~e~Alk~ar~~t~----------------r  127 (425)
T d1sffa_          84 PYLELCEIMNQKVPGD--------------------FAKKTLLVTTGSEAVENAVKIARAATK----------------R  127 (425)
T ss_dssp             HHHHHHHHHHHHSSCS--------------------SCEEEEEESSHHHHHHHHHHHHHHHHT----------------C
T ss_pred             HHHHHHHHHHhhhhhc--------------------ccceeeeeccccchhhhHHHHhhhhhc----------------c
Confidence            3367788888887432                    113478899999999999999998531                1


Q ss_pred             ceEEEecCCCchHHHHHHHHcC-------------CeEEEEecC--CCCC--cCHH-HHHHHHHHhhhcCCccEEEEEEc
Q psy1596         242 RLVAYCSDQAHSSVEKAGLIGL-------------VKMRYIESD--DKLS--LRGD-KLIEAIERDKKKHLIPFFVCGTL  303 (375)
Q Consensus       242 ~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~~Vp~d--~~g~--md~e-~Le~aI~~~~~~g~~p~~Vv~t~  303 (375)
                      +.+|-....-|-...-+..+.+             ......+..  ....  .... .+++.+..... ...+.+|++.-
T Consensus       128 ~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vaavi~EP  206 (425)
T d1sffa_         128 SGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAA-PEDIAAIVIEP  206 (425)
T ss_dssp             CEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCC-GGGEEEEEECS
T ss_pred             cceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhccc-ccceEEEEecC
Confidence            2234444445544444443321             112222221  1111  1111 22222222222 22344555443


Q ss_pred             CCCCcccc----ccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEEcCcccCCCCCccee
Q psy1596         304 GTTGACAF----DNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHFDCTA  373 (375)
Q Consensus       304 GtT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~~~g~  373 (375)
                      --.+.|.+    +-+++|.++|++||+.|++|..+.|.......+.....|+ ..|-+++.  |.++.-++.|+
T Consensus       207 i~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv-~PDi~~~g--K~l~gG~P~~a  277 (425)
T d1sffa_         207 VQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLTTFA--KSIAGGFPLAG  277 (425)
T ss_dssp             BCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEEEEC--GGGGTSSCCEE
T ss_pred             ccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCC-Cccceecc--cccCCCcceEE
Confidence            22234544    4599999999999999999999998544332222223355 57988865  55544444444

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=97.72  E-value=0.0013  Score=62.87  Aligned_cols=141  Identities=11%  Similarity=0.006  Sum_probs=78.3

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEE-ecCCCchHHHHHHHHcC------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAY-CSDQAHSSVEKAGLIGL------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~------------~~v~  267 (375)
                      ...|+.+||+||-.|+..+|..........         .....+. .....|-....+....+            ..+.
T Consensus        98 ~v~~~~sgs~a~~~a~k~ar~~~~~~~~~~---------~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (404)
T d1z7da1          98 KVLMMNTGAEANETAYKLCRKWGYEVKKIP---------ENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFS  168 (404)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHHHTSCCC---------TTCCEEEEETTC--------------------------CEE
T ss_pred             eeeeeccccchHHHHHHHHHHHHhhccccc---------ccccccccccccCCCCcccccccccccccccCCCCCCcccc
Confidence            368999999999999999998653321100         0111222 23333433333322211            1233


Q ss_pred             EEecCCCCCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccccCcccchh
Q psy1596         268 YIESDDKLSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYAGSSFICPE  343 (375)
Q Consensus       268 ~Vp~d~~g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~gg~~~~~~~  343 (375)
                      .+|.+     +.++|+..+..+     ...+|++--...+.|.+-+    +++|.++|++||+.+++|.++.|.......
T Consensus       169 ~~~~~-----~~~~l~~~~~~~-----~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~  238 (404)
T d1z7da1         169 KVPYD-----DLEALEEELKDP-----NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKL  238 (404)
T ss_dssp             EECTT-----CHHHHHHHHTST-----TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred             ccccc-----hHHHHHHHhcCC-----CEEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCccccc
Confidence            44433     556777666432     1345555433445576655    999999999999999999999775433222


Q ss_pred             hhhhhcCCCcccEEEEcC
Q psy1596         344 FRKWLAGVEYANSIAFNP  361 (375)
Q Consensus       344 ~~~~~~gie~aDSi~~d~  361 (375)
                      +.....|+ ..|.+++.=
T Consensus       239 ~~~e~~gv-~PDivt~gK  255 (404)
T d1z7da1         239 LCVHHYNV-KPDVILLGK  255 (404)
T ss_dssp             SGGGGGTC-CCSEEEECG
T ss_pred             ccccccCC-CCCEEEEcc
Confidence            22233466 579887753

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=97.67  E-value=0.00095  Score=64.26  Aligned_cols=152  Identities=13%  Similarity=0.001  Sum_probs=83.3

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-----------CeEEEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-----------VKMRYI  269 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-----------~~v~~V  269 (375)
                      ...|+.+|||||-.|+..||....                ++.++-....-|-...-++.+.+           .....+
T Consensus       102 ~v~f~~sGseA~e~Alk~Ar~~t~----------------r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~  165 (431)
T d1zoda1         102 RALLLSTGAESNEAAIRMAKLVTG----------------KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAI  165 (431)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHHT----------------CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEE
T ss_pred             eeeecccccchHHHHHHHHHHhcC----------------CcceeecccccccccchhhcccccccccccCCcccCceee
Confidence            478999999999999999997531                12234444445544444433221           123344


Q ss_pred             ecCCCC---------CcCHHHHHHHHHHhhhc-CCccEEEEEEcCCCCcccccc----HHHHHHHHHhcCCEEEEecccc
Q psy1596         270 ESDDKL---------SLRGDKLIEAIERDKKK-HLIPFFVCGTLGTTGACAFDN----LEELGPICEKEGLWLHVDAAYA  335 (375)
Q Consensus       270 p~d~~g---------~md~e~Le~aI~~~~~~-g~~p~~Vv~t~GtT~tGavDp----l~eI~~ia~~~~iwlHVDaA~g  335 (375)
                      +.....         ..+.+.++......... .....+|++.--....|.+-+    +++|.++|++||+.|+.|..+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~t  245 (431)
T d1zoda1         166 PAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQT  245 (431)
T ss_dssp             CCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTT
T ss_pred             eeecccccccccccchhhhhhHHHHHHHHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccc
Confidence            332111         11233444443322211 222334444332223455544    9999999999999999999999


Q ss_pred             cCcccchhhhhhhcCCCcccEEEEcCcccCCCCC
Q psy1596         336 GSSFICPEFRKWLAGVEYANSIAFNPSKWLMVHF  369 (375)
Q Consensus       336 g~~~~~~~~~~~~~gie~aDSi~~d~HK~l~~P~  369 (375)
                      |....-..+.....|+ ..|-+++.--=..+.|.
T Consensus       246 G~gRtG~~~~~~~~gv-~PDi~~~gK~l~gG~p~  278 (431)
T d1zoda1         246 GVGRTGTMFACQRDGV-TPDILTLSKTLGAGLPL  278 (431)
T ss_dssp             TTTTTSSSSTHHHHTC-CCSEEEECHHHHTTSSC
T ss_pred             cccccccccccccCCC-Ccchhcccccccccccc
Confidence            8543322222222355 47888876443444444

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.0023  Score=61.69  Aligned_cols=156  Identities=10%  Similarity=-0.033  Sum_probs=85.8

Q ss_pred             cEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcC-------------CeEE
Q psy1596         201 FITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGL-------------VKMR  267 (375)
Q Consensus       201 ~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~-------------~~v~  267 (375)
                      ...|+.+||+|+-.|+..+|.....+-.           .++.+|.....-|-...-++.+.+             ....
T Consensus       105 ~v~f~~sGseA~e~A~k~ar~~~~~~g~-----------~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~  173 (429)
T d1s0aa_         105 CVFLADSGSVAVEVAMKMALQYWQAKGE-----------ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENL  173 (429)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHHHHTC-----------CCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCE
T ss_pred             eeeeccccccchhhhhhhhhheeecccc-----------cccEEEEecCCccccchhhhhhcCCccccccccCccccccc
Confidence            4789999999999999999976543211           112244444555655544443321             1123


Q ss_pred             EEecC---CCC---CcCHHHHHHHHHHhhhcCCccEEEEEEcC-CCCcccc----ccHHHHHHHHHhcCCEEEEeccccc
Q psy1596         268 YIESD---DKL---SLRGDKLIEAIERDKKKHLIPFFVCGTLG-TTGACAF----DNLEELGPICEKEGLWLHVDAAYAG  336 (375)
Q Consensus       268 ~Vp~d---~~g---~md~e~Le~aI~~~~~~g~~p~~Vv~t~G-tT~tGav----Dpl~eI~~ia~~~~iwlHVDaA~gg  336 (375)
                      ..|..   ...   .-+.+++++.+.+.   +..+.+|++.-. ....|.+    +=+++|.++|++||+.|++|..+.|
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tG  250 (429)
T d1s0aa_         174 FAPAPQSRMDGEWDERDMVGFARLMAAH---RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATG  250 (429)
T ss_dssp             EECCCCSBC-CCCCGGGGHHHHHHHHHH---TTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             cccccccccccccchhhhhhhhhhhhhc---CCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhcccc
Confidence            33321   112   23445555555443   223444444421 1222332    2399999999999999999999998


Q ss_pred             CcccchhhhhhhcCCCcccEEEEcCcc-cCCCCCcc
Q psy1596         337 SSFICPEFRKWLAGVEYANSIAFNPSK-WLMVHFDC  371 (375)
Q Consensus       337 ~~~~~~~~~~~~~gie~aDSi~~d~HK-~l~~P~~~  371 (375)
                      ....-.-+.....++ ..|-+++.--= .++.|.++
T Consensus       251 fGRtG~~~~~~~~~v-~PDi~~~gK~l~gG~~p~~a  285 (429)
T d1s0aa_         251 FGRTGKLFACEHAEI-APDILCLGKALTGGTMTLSA  285 (429)
T ss_dssp             TTTTSSSSGGGGGTC-CCSEEEECGGGGTSSSCCEE
T ss_pred             cccccccccccccee-cccccccccccccccccccc
Confidence            754332222223344 46888775322 22355544

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.19  E-value=0.0083  Score=58.09  Aligned_cols=161  Identities=13%  Similarity=-0.054  Sum_probs=87.7

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcch---------hhhhcCceEEE-ecCCCchHHHHHHHHcCCe----
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELE---------HAEINSRLVAY-CSDQAHSSVEKAGLIGLVK----  265 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~---------~~~~~~~~vV~-~S~~aH~Sv~kaa~lg~~~----  265 (375)
                      ...+|+.+|||||-.|+..||.+...+.+.......         .....++..|+ ....-|-...-++.+.+..    
T Consensus       118 ~~v~f~~sGseAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~  197 (461)
T d1ohwa_         118 SQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHK  197 (461)
T ss_dssp             CEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHH
T ss_pred             ceeeeecchhhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCccccc
Confidence            357999999999999999998765332111100000         00011233444 4455565554444433211    


Q ss_pred             -------EEEEecC-CC-------------CCcCHHHHHHHHHHhhhcCCccEEEEEEcCCCCcccc----ccHHHHHHH
Q psy1596         266 -------MRYIESD-DK-------------LSLRGDKLIEAIERDKKKHLIPFFVCGTLGTTGACAF----DNLEELGPI  320 (375)
Q Consensus       266 -------v~~Vp~d-~~-------------g~md~e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGav----Dpl~eI~~i  320 (375)
                             ....|.. ..             ...+.++|++.+......+..+.+|++.-.....|.+    +=+++|.++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~l  277 (461)
T d1ohwa_         198 IDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDI  277 (461)
T ss_dssp             TTCCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHH
T ss_pred             ccccccCCcccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHH
Confidence                   1111110 00             0123567777776544434344455554433344544    239999999


Q ss_pred             HHhcCCEEEEecccccCcccchhhhhhhcCCC-cccEEEEc
Q psy1596         321 CEKEGLWLHVDAAYAGSSFICPEFRKWLAGVE-YANSIAFN  360 (375)
Q Consensus       321 a~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie-~aDSi~~d  360 (375)
                      |++||+.|++|..+.|....-.-+.....|++ ..|-+++.
T Consensus       278 c~~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PDiv~~g  318 (461)
T d1ohwa_         278 SRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS  318 (461)
T ss_dssp             HHHTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCSEEEEC
T ss_pred             HHhhCcceeccccccccccccccccccccccccCchhhhhh
Confidence            99999999999999876432221222233554 57888875

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=97.16  E-value=0.00039  Score=67.36  Aligned_cols=133  Identities=8%  Similarity=-0.035  Sum_probs=85.8

Q ss_pred             CcEEEeCChHHHHHHHHHHHHHHHHHHhhccCCcchhhhhcCceEEEecCCCchHHHHHHHHcCCeEEEEecCCCCCcCH
Q psy1596         200 NFITFQTTASESTLICLLAGRTEAIRKYQQSHPELEHAEINSRLVAYCSDQAHSSVEKAGLIGLVKMRYIESDDKLSLRG  279 (375)
Q Consensus       200 ~~GvftsGGT~Anl~AL~aar~~~~~~~~~~~~~~~~~~~~~~~vV~~S~~aH~Sv~kaa~lg~~~v~~Vp~d~~g~md~  279 (375)
                      ...++++|+||++..++.+.....           ......++..|+++...+..+...+.+.+.....++      +|.
T Consensus       124 ~~IvvG~Gsteli~~~~~AL~~~~-----------~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~~~------~D~  186 (425)
T d2hoxa1         124 RYIVFGVGVTQLIHGLVISLSPNM-----------TATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWA------GNA  186 (425)
T ss_dssp             CEEEEESHHHHHHHHHHHHHSCCT-----------TTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEE------EEG
T ss_pred             CEEEECCCHHHHHHHHHHHhcccc-----------ccccCCCCCEEEEecCccccHHHHHHHcCCCCCccC------CCH
Confidence            348999999998877776543210           000113556789999999888888877655444444      466


Q ss_pred             HHHHHHHHHhhhcCCccEEEEEEcCCCCccccccHHHHHHHHHhcCCEEEEecccccCcccchhhhhhhcCCCcccEEEE
Q psy1596         280 DKLIEAIERDKKKHLIPFFVCGTLGTTGACAFDNLEELGPICEKEGLWLHVDAAYAGSSFICPEFRKWLAGVEYANSIAF  359 (375)
Q Consensus       280 e~Le~aI~~~~~~g~~p~~Vv~t~GtT~tGavDpl~eI~~ia~~~~iwlHVDaA~gg~~~~~~~~~~~~~gie~aDSi~~  359 (375)
                      +.++++++..      +.+++++.++|+||.+..       +..+++++++|.+|.+... .|.     .....=+-+..
T Consensus       187 ~~~~~~~~~~------~~ii~l~sPnNPtG~l~~-------~v~~~~~~I~DEaY~~~~f-~~~-----~~~~~~~Ivl~  247 (425)
T d2hoxa1         187 ANYVNVSNPE------QYIEMVTSPNNPEGLLRH-------AVIKGCKSIYDMVYYWPHY-TPI-----KYKADEDILLF  247 (425)
T ss_dssp             GGGTTCSCGG------GEEEEEESSCTTTCCCCC-------CSSTTCEEEEECTTCSTTT-SCC-----CSCBCCSEEEE
T ss_pred             HHHHhhCCCC------ceEEEEECCCCCCcchhh-------hhhhCCEEEEeccccCccc-cch-----hhhcCCeEEEE
Confidence            6666655433      568999999999998732       2235899999999976432 111     11112256777


Q ss_pred             cCcccCCCC
Q psy1596         360 NPSKWLMVH  368 (375)
Q Consensus       360 d~HK~l~~P  368 (375)
                      ++.|.++.|
T Consensus       248 S~SK~fgla  256 (425)
T d2hoxa1         248 TMSKFTGHS  256 (425)
T ss_dssp             EHHHHTSCG
T ss_pred             eCHHhccCc
Confidence            888876644